14034 chr1 12569921 12569921 1 + A G rs144375933 12569921 + 12569901 12569941 41 TATTATTAGAGAGGTTGGAAACATTGGTAAACTCTGTTGAT TATTATTAGAGAGGTTGGAAGCATTGGTAAACTCTGTTGAT Direct Loss 1 0.457747024405243 1 0.0378807485103607 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 VPS13D ENSG00000048707 UTR3 Human protein_coding chr1:12569921 chr1:12569921 . . 0 hm6A_associated_SNPs_1 0 0 1 1 12569919 12569941 mRNA hsa-miR-421 VPS13D miRanda miRanda
14034 chr1 28212879 28212879 1 + A C rs11485 28212879 + 28212859 28212899 41 TAAGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTA TAAGCCCCCGGGAGGCCTGGCCTGTCTTCCTCATCTCTGTA Direct Loss 1 0.535025709953101 1 0.703867435455322 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 THEMIS2 ENSG00000130775 UTR3 Human protein_coding chr1:28212879 chr1:28212879 . . 0 hm6A_associated_SNPs_3 0 0 0 2 28212868 28212889 mRNA hsa-miR-7 C1orf38 miRanda miRanda
14034 chr1 28212879 28212879 1 + A C rs11485 28212879 + 28212859 28212899 41 TAAGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTA TAAGCCCCCGGGAGGCCTGGCCTGTCTTCCTCATCTCTGTA Direct Loss 1 0.535025709953101 1 0.703867435455322 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 THEMIS2 ENSG00000130775 UTR3 Human protein_coding chr1:28212879 chr1:28212879 . . 0 hm6A_associated_SNPs_3 0 0 0 2 28212874 28212896 mRNA hsa-miR-143 C1orf38 miRanda miRanda
14034 chr1 28864731 28864731 1 + A G rs146363349 28864731 + 28864711 28864751 41 CAGAATAAAGGGGGGGATGGACAGGGGGTTTTCAAAAGGAA CAGAATAAAGGGGGGGATGGGCAGGGGGTTTTCAAAAGGAA Direct Loss 1 0.903792786048982 1 0.820019364356995 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 RCC1 ENSG00000180198 UTR3 Human protein_coding chr1:28864731 chr1:28864731 . . 0 hm6A_associated_SNPs_5 0 0 1 2 28864714 28864737 mRNA hsa-miR-339-5p SNHG3-RCC1 miRanda miRanda
14034 chr1 28864731 28864731 1 + A G rs146363349 28864731 + 28864711 28864751 41 CAGAATAAAGGGGGGGATGGACAGGGGGTTTTCAAAAGGAA CAGAATAAAGGGGGGGATGGGCAGGGGGTTTTCAAAAGGAA Direct Loss 1 0.903792786048982 1 0.820019364356995 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 RCC1 ENSG00000180198 UTR3 Human protein_coding chr1:28864731 chr1:28864731 . . 0 hm6A_associated_SNPs_5 0 0 1 2 28864714 28864737 mRNA hsa-miR-339-5p RCC1 miRanda miRanda
14034 chr1 93307423 93307423 1 + A G rs11540833 93307423 + 93307403 93307443 41 AGCGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTATGATT AGCGGGCTGCTGAGAGCTAAGCCCAGCAATTTTCTATGATT Direct Loss 1 0.186410582835636 1 0.788774490356445 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 UTR3 Human protein_coding chr1:93307423 chr1:93307423 . . 0 hm6A_associated_SNPs_13 0 0 1 4 93307423 93307442 mRNA hsa-miR-376a RPL5 miRanda miRanda
14034 chr1 93307423 93307423 1 + A G rs11540833 93307423 + 93307403 93307443 41 AGCGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTATGATT AGCGGGCTGCTGAGAGCTAAGCCCAGCAATTTTCTATGATT Direct Loss 1 0.186410582835636 1 0.788774490356445 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 UTR3 Human protein_coding chr1:93307423 chr1:93307423 . . 0 hm6A_associated_SNPs_13 0 0 1 4 93307422 93307442 mRNA hsa-miR-376a RPL5 miRanda miRanda
14034 chr1 93307423 93307423 1 + A G rs11540833 93307423 + 93307403 93307443 41 AGCGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTATGATT AGCGGGCTGCTGAGAGCTAAGCCCAGCAATTTTCTATGATT Direct Loss 1 0.186410582835636 1 0.788774490356445 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 UTR3 Human protein_coding chr1:93307423 chr1:93307423 . . 0 hm6A_associated_SNPs_13 0 0 1 4 93307423 93307442 mRNA hsa-miR-376b RPL5 miRanda miRanda
14034 chr1 93307423 93307423 1 + A G rs11540833 93307423 + 93307403 93307443 41 AGCGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTATGATT AGCGGGCTGCTGAGAGCTAAGCCCAGCAATTTTCTATGATT Direct Loss 1 0.186410582835636 1 0.788774490356445 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 UTR3 Human protein_coding chr1:93307423 chr1:93307423 . . 0 hm6A_associated_SNPs_13 0 0 1 4 93307421 93307442 mRNA hsa-miR-376b RPL5 miRanda miRanda
14034 chr1 110137874 110137874 1 + A G rs561763876 110137874 + 110137854 110137894 41 TTAATGGACAGTCCCCCCTAACCTTATAAATTCAGCTTTGC TTAATGGACAGTCCCCCCTAGCCTTATAAATTCAGCTTTGC Direct Loss 1 0.01025148044223 1 0.567350447177887 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 GNAI3 ENSG00000225113;ENSG00000065135 upstream;downstream Human other chr1:110137874 chr1:110137874 . . 0 hm6A_associated_SNPs_14 0 0 0 3 110137872 110137893 mRNA hsa-miR-320a GNAI3 miRanda miRanda
14034 chr1 110137874 110137874 1 + A G rs561763876 110137874 + 110137854 110137894 41 TTAATGGACAGTCCCCCCTAACCTTATAAATTCAGCTTTGC TTAATGGACAGTCCCCCCTAGCCTTATAAATTCAGCTTTGC Direct Loss 1 0.01025148044223 1 0.567350447177887 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 GNAI3 ENSG00000225113;ENSG00000065135 upstream;downstream Human other chr1:110137874 chr1:110137874 . . 0 hm6A_associated_SNPs_14 0 0 0 3 110137872 110137893 mRNA hsa-miR-320b GNAI3 miRanda miRanda
14034 chr1 110137874 110137874 1 + A G rs561763876 110137874 + 110137854 110137894 41 TTAATGGACAGTCCCCCCTAACCTTATAAATTCAGCTTTGC TTAATGGACAGTCCCCCCTAGCCTTATAAATTCAGCTTTGC Direct Loss 1 0.01025148044223 1 0.567350447177887 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 GNAI3 ENSG00000225113;ENSG00000065135 upstream;downstream Human other chr1:110137874 chr1:110137874 . . 0 hm6A_associated_SNPs_14 0 0 0 3 110137874 110137893 mRNA hsa-miR-320c GNAI3 miRanda miRanda
14034 chr1 171562515 171562515 1 + A C rs574072556 171562515 + 171562495 171562535 41 TTGGCATTGTACAGAAATTAACAGCCATATTGGTCTAGAAA TTGGCATTGTACAGAAATTACCAGCCATATTGGTCTAGAAA Direct Loss 1 0.431931820309153 1 0.836630582809448 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 PRRC2C ENSG00000117523 UTR3 Human protein_coding chr1:171562515 chr1:171562515 . . 0 hm6A_associated_SNPs_22 0 0 1 2 171562501 171562523 mRNA hsa-miR-135a BAT2L2 miRanda miRanda
14034 chr1 171562515 171562515 1 + A C rs574072556 171562515 + 171562495 171562535 41 TTGGCATTGTACAGAAATTAACAGCCATATTGGTCTAGAAA TTGGCATTGTACAGAAATTACCAGCCATATTGGTCTAGAAA Direct Loss 1 0.431931820309153 1 0.836630582809448 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 PRRC2C ENSG00000117523 UTR3 Human protein_coding chr1:171562515 chr1:171562515 . . 0 hm6A_associated_SNPs_22 0 0 1 2 171562501 171562523 mRNA hsa-miR-135b BAT2L2 miRanda miRanda
14034 chr1 192780790 192780790 1 + A C rs558660303 192780790 + 192780770 192780810 41 TCCTGAGGGGAAGGACTGTGACCTGCCATAAAGACTGACCT TCCTGAGGGGAAGGACTGTGCCCTGCCATAAAGACTGACCT Direct Loss 1 0.777474530929541 1 0.917529940605164 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 RGS2 ENSG00000116741 UTR3 Human protein_coding chr1:192780790 chr1:192780790 . . 0 hm6A_associated_SNPs_26 0 0 1 2 192780771 192780791 mRNA hsa-miR-27a RGS2 miRanda miRanda
14034 chr1 192780790 192780790 1 + A C rs558660303 192780790 + 192780770 192780810 41 TCCTGAGGGGAAGGACTGTGACCTGCCATAAAGACTGACCT TCCTGAGGGGAAGGACTGTGCCCTGCCATAAAGACTGACCT Direct Loss 1 0.777474530929541 1 0.917529940605164 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 RGS2 ENSG00000116741 UTR3 Human protein_coding chr1:192780790 chr1:192780790 . . 0 hm6A_associated_SNPs_26 0 0 1 2 192780771 192780791 mRNA hsa-miR-27b RGS2 miRanda miRanda
14034 chr1 203277168 203277168 1 + A T rs138492634 203277168 + 203277148 203277188 41 CTGCTTTTCTTGAAATCATGACTTGTTTCTAATTCTACCCT CTGCTTTTCTTGAAATCATGTCTTGTTTCTAATTCTACCCT Direct Loss 1 0.248884588922306 1 0.0463666617870331 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 BTG2 ENSG00000159388 UTR3 Human protein_coding chr1:203277168 chr1:203277168 . . 0 hm6A_associated_SNPs_27 0 0 1 1 203277148 203277169 mRNA hsa-miR-433 BTG2 miRanda miRanda
14034 chr1 218615451 218615451 1 + A C rs991967 218615451 + 218615431 218615471 41 AAGGTCCAAAAACTAAAAAGACTGTTAATAAAAGAAACTTT AAGGTCCAAAAACTAAAAAGCCTGTTAATAAAAGAAACTTT Direct Loss 1 0.311415898627047 1 0.967139363288879 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 MIR548F3 ENSG00000092969 UTR3 Human protein_coding chr1:218615451 chr1:218615451 . . 0 hm6A_associated_SNPs_30 1 1 1 2 218615437 218615457 mRNA hsa-miR-212 TGFB2 miRanda miRanda
14034 chr1 218615451 218615451 1 + A C rs991967 218615451 + 218615431 218615471 41 AAGGTCCAAAAACTAAAAAGACTGTTAATAAAAGAAACTTT AAGGTCCAAAAACTAAAAAGCCTGTTAATAAAAGAAACTTT Direct Loss 1 0.311415898627047 1 0.967139363288879 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 MIR548F3 ENSG00000092969 UTR3 Human protein_coding chr1:218615451 chr1:218615451 . . 0 hm6A_associated_SNPs_30 1 1 1 2 218615436 218615457 mRNA hsa-miR-132 TGFB2 miRanda miRanda
14034 chr1 223962919 223962919 1 + A C rs28370178 223962919 + 223962899 223962939 41 TATTTAACAGCTGAGCAAAAACATTGAGTCGCTCTCAAAGG TATTTAACAGCTGAGCAAAACCATTGAGTCGCTCTCAAAGG Direct Loss 1 0.659396427765 1 0.892000317573547 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 CAPN2 ENSG00000162909 UTR3 Human protein_coding chr1:223962919 chr1:223962919 . . 0 hm6A_associated_SNPs_33 0 0 1 1 223962899 223962920 mRNA hsa-miR-129-5p CAPN2 miRanda miRanda
14034 chr2 58386788 58386788 1 - T G rs146396399 58386788 - 58386768 58386808 41 GAAATACTAACATCAAAAGGACAGGTATGATGATGCGATAA GAAATACTAACATCAAAAGGCCAGGTATGATGATGCGATAA Direct Loss 1 0.987018332799695 1 0.136876314878464 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 21 VRK2 ENSG00000028116 CDS Human protein_coding chr2:58386788 chr2:58386788 nonsynonymous SNV 0.008 0 hm6A_associated_SNPs_39 0 0 1 2 58386782 58386804 mRNA hsa-miR-339-5p FANCL miRanda miRanda
14034 chr2 58386788 58386788 1 - T G rs146396399 58386788 - 58386768 58386808 41 GAAATACTAACATCAAAAGGACAGGTATGATGATGCGATAA GAAATACTAACATCAAAAGGCCAGGTATGATGATGCGATAA Direct Loss 1 0.987018332799695 1 0.136876314878464 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 21 VRK2 ENSG00000028116 CDS Human protein_coding chr2:58386788 chr2:58386788 nonsynonymous SNV 0.008 0 hm6A_associated_SNPs_39 0 0 1 2 58386780 58386801 mRNA hsa-miR-875-5p FANCL miRanda miRanda
14034 chr2 131104117 131104117 1 + A G rs116215643 131104117 + 131104097 131104137 41 AGACAGACCCACCAGTAGGAACTGTCACAGAATGGCCTGCT AGACAGACCCACCAGTAGGAGCTGTCACAGAATGGCCTGCT Direct Loss 1 0.629282062481708 1 0.972333192825317 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 21 IMP4 ENSG00000136718 UTR3 Human protein_coding chr2:131104117 chr2:131104117 . . 0 hm6A_associated_SNPs_49 0 0 1 1 131104106 131104125 mRNA hsa-miR-542-3p IMP4 miRanda miRanda
14034 chr2 196602204 196602204 1 + A G rs183627451 196602204 + 196602184 196602224 41 TTTTTTCCATTAACAAACAAACAAGTCAGTGGCTTAAATGT TTTTTTCCATTAACAAACAAGCAAGTCAGTGGCTTAAATGT Direct Loss 1 0.468832289065664 1 0.00264403223991394 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196602204 chr2:196602204 . . 0 hm6A_associated_SNPs_56 0 0 1 2 196602204 196602227 mRNA hsa-miR-23a SLC39A10 miRanda miRanda
14034 chr2 196602204 196602204 1 + A G rs183627451 196602204 + 196602184 196602224 41 TTTTTTCCATTAACAAACAAACAAGTCAGTGGCTTAAATGT TTTTTTCCATTAACAAACAAGCAAGTCAGTGGCTTAAATGT Direct Loss 1 0.468832289065664 1 0.00264403223991394 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196602204 chr2:196602204 . . 0 hm6A_associated_SNPs_56 0 0 1 2 196602204 196602227 mRNA hsa-miR-23b SLC39A10 miRanda miRanda
14034 chr3 49572614 49572614 1 + A G rs117459922 49572614 + 49572594 49572634 41 GTTTCCCTGGTGCCCCAGAGACAGGAGCACAAGTGGGATCT GTTTCCCTGGTGCCCCAGAGGCAGGAGCACAAGTGGGATCT Direct Loss 1 0.52157304159972 1 0.557274103164673 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 DAG1 ENSG00000173402 UTR3 Human protein_coding chr3:49572614 chr3:49572614 . . 0 hm6A_associated_SNPs_69 0 0 1 1 49572600 49572623 mRNA hsa-miR-874 DAG1 miRanda miRanda
14034 chr3 52284077 52284077 1 + A T rs376461678 52284077 + 52284057 52284097 41 TAACCTTCTCTGGCAGAGTGACTTTACAACTTAACTAGGAA TAACCTTCTCTGGCAGAGTGTCTTTACAACTTAACTAGGAA Direct Loss 1 0.337869991132965 1 0.12462791800499 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PPM1M ENSG00000164088 UTR3 Human protein_coding chr3:52284077 chr3:52284077 . . 0 hm6A_associated_SNPs_70 0 0 1 3 52284061 52284081 mRNA hsa-miR-224 PPM1M miRanda miRanda
14034 chr3 52284077 52284077 1 + A T rs376461678 52284077 + 52284057 52284097 41 TAACCTTCTCTGGCAGAGTGACTTTACAACTTAACTAGGAA TAACCTTCTCTGGCAGAGTGTCTTTACAACTTAACTAGGAA Direct Loss 1 0.337869991132965 1 0.12462791800499 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PPM1M ENSG00000164088 UTR3 Human protein_coding chr3:52284077 chr3:52284077 . . 0 hm6A_associated_SNPs_70 0 0 1 3 52284068 52284089 mRNA hsa-miR-382 PPM1M miRanda miRanda
14034 chr3 52284077 52284077 1 + A T rs376461678 52284077 + 52284057 52284097 41 TAACCTTCTCTGGCAGAGTGACTTTACAACTTAACTAGGAA TAACCTTCTCTGGCAGAGTGTCTTTACAACTTAACTAGGAA Direct Loss 1 0.337869991132965 1 0.12462791800499 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PPM1M ENSG00000164088 UTR3 Human protein_coding chr3:52284077 chr3:52284077 . . 0 hm6A_associated_SNPs_70 0 0 1 3 52284077 52284098 mRNA hsa-miR-384 PPM1M miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114927 73114948 mRNA hsa-miR-25 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114931 73114948 mRNA hsa-miR-32 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114927 73114948 mRNA hsa-miR-92a PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114935 73114957 mRNA hsa-miR-136 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114927 73114948 mRNA hsa-miR-363 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114920 73114948 mRNA hsa-miR-367 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114926 73114947 mRNA hsa-miR-377 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114927 73114948 mRNA hsa-miR-92b PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114935 + 73114915 73114955 41 TGGTTTTAACACTGTATAAAACTTTTGTGTAATAAAATGGA TGGTTTTAACACTGTATAAAGCTTTTGTGTAATAAAATGGA Direct Loss 1 0.706519339076766 1 0.988989174365997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114935 chr3:73114935 . . 0 hm6A_associated_SNPs_72 0 0 1 9 73114933 73114954 mRNA hsa-miR-590-3p PPP4R2 miRanda miRanda
14034 chr3 112720015 112720015 1 + A C rs144857604 112720015 + 112719995 112720035 41 TGATTCCCCTATTTTAACAAACTGACAAGAGCACATCCATA TGATTCCCCTATTTTAACAACCTGACAAGAGCACATCCATA Direct Loss 1 0.584532370124542 1 0.850877046585083 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 GTPBP8 ENSG00000163607 UTR3 Human protein_coding chr3:112720015 chr3:112720015 . . 0 hm6A_associated_SNPs_73 0 0 1 1 112719999 112720021 mRNA hsa-miR-223 GTPBP8 miRanda miRanda
14034 chr3 132396075 132396075 1 + A C rs146420900 132396075 + 132396055 132396095 41 TAAATTATATTCTGCACCGAACAAGGAACAGAAATTATTGC TAAATTATATTCTGCACCGACCAAGGAACAGAAATTATTGC Direct Loss 1 0.496721620784072 1 0.220831513404846 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 NPHP3-ACAD11 ENSG00000081307 UTR3 Human protein_coding chr3:132396075 chr3:132396075 . . 0 hm6A_associated_SNPs_74 0 0 1 1 132396057 132396079 mRNA hsa-miR-375 UBA5 miRanda miRanda
14034 chr3 196388639 196388639 1 + A G rs576465166 196388639 + 196388619 196388659 41 TTCGGTCCGCACACAACAGGACACTTTCTCTGCCAGCTTTC TTCGGTCCGCACACAACAGGGCACTTTCTCTGCCAGCTTTC Direct Loss 1 0.373864177894301 1 0.978838562965393 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 NRROS ENSG00000174004 UTR3 Human protein_coding chr3:196388639 chr3:196388639 . . 0 hm6A_associated_SNPs_82 0 0 0 3 196388623 196388646 mRNA hsa-miR-20a LRRC33 miRanda miRanda
14034 chr3 196388639 196388639 1 + A G rs576465166 196388639 + 196388619 196388659 41 TTCGGTCCGCACACAACAGGACACTTTCTCTGCCAGCTTTC TTCGGTCCGCACACAACAGGGCACTTTCTCTGCCAGCTTTC Direct Loss 1 0.373864177894301 1 0.978838562965393 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 NRROS ENSG00000174004 UTR3 Human protein_coding chr3:196388639 chr3:196388639 . . 0 hm6A_associated_SNPs_82 0 0 0 3 196388639 196388659 mRNA hsa-miR-320a LRRC33 miRanda miRanda
14034 chr3 196388639 196388639 1 + A G rs576465166 196388639 + 196388619 196388659 41 TTCGGTCCGCACACAACAGGACACTTTCTCTGCCAGCTTTC TTCGGTCCGCACACAACAGGGCACTTTCTCTGCCAGCTTTC Direct Loss 1 0.373864177894301 1 0.978838562965393 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 NRROS ENSG00000174004 UTR3 Human protein_coding chr3:196388639 chr3:196388639 . . 0 hm6A_associated_SNPs_82 0 0 0 3 196388639 196388659 mRNA hsa-miR-320b LRRC33 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734543 + 76734523 76734563 41 TGGAAAATAAAGATTTAGAAACCAGGTGGAAAACATTCACT TGGAAAATAAAGATTTAGAAGCCAGGTGGAAAACATTCACT Direct Loss 1 0.371301515638374 1 0.989842891693115 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734543 chr4:76734543 . . 0 hm6A_associated_SNPs_92 0 0 1 4 76734541 76734562 mRNA hsa-miR-1 USO1 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734543 + 76734523 76734563 41 TGGAAAATAAAGATTTAGAAACCAGGTGGAAAACATTCACT TGGAAAATAAAGATTTAGAAGCCAGGTGGAAAACATTCACT Direct Loss 1 0.371301515638374 1 0.989842891693115 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734543 chr4:76734543 . . 0 hm6A_associated_SNPs_92 0 0 1 4 76734541 76734562 mRNA hsa-miR-206 USO1 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734543 + 76734523 76734563 41 TGGAAAATAAAGATTTAGAAACCAGGTGGAAAACATTCACT TGGAAAATAAAGATTTAGAAGCCAGGTGGAAAACATTCACT Direct Loss 1 0.371301515638374 1 0.989842891693115 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734543 chr4:76734543 . . 0 hm6A_associated_SNPs_92 0 0 1 4 76734530 76734551 mRNA hsa-miR-490-3p USO1 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734543 + 76734523 76734563 41 TGGAAAATAAAGATTTAGAAACCAGGTGGAAAACATTCACT TGGAAAATAAAGATTTAGAAGCCAGGTGGAAAACATTCACT Direct Loss 1 0.371301515638374 1 0.989842891693115 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734543 chr4:76734543 . . 0 hm6A_associated_SNPs_92 0 0 1 4 76734543 76734562 mRNA hsa-miR-613 USO1 miRanda miRanda
14034 chr5 6757077 6757077 1 + A G rs564818762 6757077 + 6757057 6757097 41 TTCGATTTTTTTGTGTGTGGACAACAATATGGAAGCTAAAA TTCGATTTTTTTGTGTGTGGGCAACAATATGGAAGCTAAAA Direct Loss 1 0.792132466006387 1 0.64004909992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 21 PAPD7 ENSG00000112941 UTR3 Human protein_coding chr5:6757077 chr5:6757077 . . 0 hm6A_associated_SNPs_100 0 0 1 3 6757072 6757094 mRNA hsa-miR-22 PAPD7 miRanda miRanda
14034 chr5 6757077 6757077 1 + A G rs564818762 6757077 + 6757057 6757097 41 TTCGATTTTTTTGTGTGTGGACAACAATATGGAAGCTAAAA TTCGATTTTTTTGTGTGTGGGCAACAATATGGAAGCTAAAA Direct Loss 1 0.792132466006387 1 0.64004909992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 21 PAPD7 ENSG00000112941 UTR3 Human protein_coding chr5:6757077 chr5:6757077 . . 0 hm6A_associated_SNPs_100 0 0 1 3 6757056 6757077 mRNA hsa-miR-377 PAPD7 miRanda miRanda
14034 chr5 6757077 6757077 1 + A G rs564818762 6757077 + 6757057 6757097 41 TTCGATTTTTTTGTGTGTGGACAACAATATGGAAGCTAAAA TTCGATTTTTTTGTGTGTGGGCAACAATATGGAAGCTAAAA Direct Loss 1 0.792132466006387 1 0.64004909992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 21 PAPD7 ENSG00000112941 UTR3 Human protein_coding chr5:6757077 chr5:6757077 . . 0 hm6A_associated_SNPs_100 0 0 1 3 6757077 6757100 mRNA hsa-miR-590-3p PAPD7 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929242 + 112929222 112929262 41 GAATGCACTGACTTTCAAAAACTGAGGTGGGGTGTGTGTTA GAATGCACTGACTTTCAAAAGCTGAGGTGGGGTGTGTGTTA Direct Loss 1 0.437790681503158 1 0.836540579795837 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929242 chr5:112929242 . . 0 hm6A_associated_SNPs_109 0 0 1 6 112929242 112929264 mRNA hsa-miR-30a YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929242 + 112929222 112929262 41 GAATGCACTGACTTTCAAAAACTGAGGTGGGGTGTGTGTTA GAATGCACTGACTTTCAAAAGCTGAGGTGGGGTGTGTGTTA Direct Loss 1 0.437790681503158 1 0.836540579795837 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929242 chr5:112929242 . . 0 hm6A_associated_SNPs_109 0 0 1 6 112929242 112929264 mRNA hsa-miR-30c YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929242 + 112929222 112929262 41 GAATGCACTGACTTTCAAAAACTGAGGTGGGGTGTGTGTTA GAATGCACTGACTTTCAAAAGCTGAGGTGGGGTGTGTGTTA Direct Loss 1 0.437790681503158 1 0.836540579795837 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929242 chr5:112929242 . . 0 hm6A_associated_SNPs_109 0 0 1 6 112929242 112929264 mRNA hsa-miR-30d YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929242 + 112929222 112929262 41 GAATGCACTGACTTTCAAAAACTGAGGTGGGGTGTGTGTTA GAATGCACTGACTTTCAAAAGCTGAGGTGGGGTGTGTGTTA Direct Loss 1 0.437790681503158 1 0.836540579795837 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929242 chr5:112929242 . . 0 hm6A_associated_SNPs_109 0 0 1 6 112929241 112929264 mRNA hsa-miR-30b YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929242 + 112929222 112929262 41 GAATGCACTGACTTTCAAAAACTGAGGTGGGGTGTGTGTTA GAATGCACTGACTTTCAAAAGCTGAGGTGGGGTGTGTGTTA Direct Loss 1 0.437790681503158 1 0.836540579795837 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929242 chr5:112929242 . . 0 hm6A_associated_SNPs_109 0 0 1 6 112929238 112929259 mRNA hsa-miR-362-3p YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929242 + 112929222 112929262 41 GAATGCACTGACTTTCAAAAACTGAGGTGGGGTGTGTGTTA GAATGCACTGACTTTCAAAAGCTGAGGTGGGGTGTGTGTTA Direct Loss 1 0.437790681503158 1 0.836540579795837 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929242 chr5:112929242 . . 0 hm6A_associated_SNPs_109 0 0 1 6 112929242 112929259 mRNA hsa-miR-329 YTHDC2 miRanda miRanda
14034 chr5 138665490 138665490 1 + A G rs185734839 138665490 + 138665470 138665510 41 TTTTATTACTTTCATCTGAAACATTCCATGTTTTAATCTGA TTTTATTACTTTCATCTGAAGCATTCCATGTTTTAATCTGA Direct Loss 1 0.539037475547247 1 0.837240040302277 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MATR3 ENSG00000015479 UTR3 Human protein_coding chr5:138665490 chr5:138665490 . . 0 hm6A_associated_SNPs_111 1 0 1 4 138665490 138665514 mRNA hsa-miR-24 MATR3 miRanda miRanda
14034 chr5 138665490 138665490 1 + A G rs185734839 138665490 + 138665470 138665510 41 TTTTATTACTTTCATCTGAAACATTCCATGTTTTAATCTGA TTTTATTACTTTCATCTGAAGCATTCCATGTTTTAATCTGA Direct Loss 1 0.539037475547247 1 0.837240040302277 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MATR3 ENSG00000015479 UTR3 Human protein_coding chr5:138665490 chr5:138665490 . . 0 hm6A_associated_SNPs_111 1 0 1 4 138665475 138665497 mRNA hsa-miR-1 MATR3 miRanda miRanda
14034 chr5 138665490 138665490 1 + A G rs185734839 138665490 + 138665470 138665510 41 TTTTATTACTTTCATCTGAAACATTCCATGTTTTAATCTGA TTTTATTACTTTCATCTGAAGCATTCCATGTTTTAATCTGA Direct Loss 1 0.539037475547247 1 0.837240040302277 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MATR3 ENSG00000015479 UTR3 Human protein_coding chr5:138665490 chr5:138665490 . . 0 hm6A_associated_SNPs_111 1 0 1 4 138665471 138665497 mRNA hsa-miR-206 MATR3 miRanda miRanda
14034 chr5 138665490 138665490 1 + A G rs185734839 138665490 + 138665470 138665510 41 TTTTATTACTTTCATCTGAAACATTCCATGTTTTAATCTGA TTTTATTACTTTCATCTGAAGCATTCCATGTTTTAATCTGA Direct Loss 1 0.539037475547247 1 0.837240040302277 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MATR3 ENSG00000015479 UTR3 Human protein_coding chr5:138665490 chr5:138665490 . . 0 hm6A_associated_SNPs_111 1 0 1 4 138665478 138665497 mRNA hsa-miR-613 MATR3 miRanda miRanda
14034 chr6 31637734 31637734 1 + A T rs5872 31637734 + 31637714 31637754 41 CACCTGTCCTGCAGTCTTTGACTTTTCCTTTCTTTTTTGCC CACCTGTCCTGCAGTCTTTGTCTTTTCCTTTCTTTTTTGCC Direct Loss 1 0.192979720313255 1 0.78722608089447 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 CSNK2B ENSG00000204435 UTR3 Human protein_coding chr6:31637734 chr6:31637734 . . 0 hm6A_associated_SNPs_126 0 0 1 1 31637727 31637747 mRNA hsa-miR-488 CSNK2B miRanda miRanda
14034 chr6 41065381 41065381 1 + A G rs371950018 41065381 + 41065361 41065401 41 CCTATTTCAGACTGTTGATGACATTGACATTTCATGGATTC CCTATTTCAGACTGTTGATGGCATTGACATTTCATGGATTC Direct Loss 1 0.891464979782962 1 0.995160937309265 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 NFYA ENSG00000001167 UTR3 Human protein_coding chr6:41065381 chr6:41065381 . . 0 hm6A_associated_SNPs_127 0 0 1 1 41065374 41065395 mRNA hsa-miR-203 NFYA miRanda miRanda
14034 chr6 150292903 150292903 1 + A G rs554921036 150292903 + 150292883 150292923 41 CTAGTAAAATAGCATGCTGGACTTCAGACCTCAGGGATCCT CTAGTAAAATAGCATGCTGGGCTTCAGACCTCAGGGATCCT Direct Loss 1 0.194759642644508 1 0.435960471630096 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 21 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150292903 chr6:150292903 . . 0 hm6A_associated_SNPs_132 0 0 1 4 150292898 150292919 mRNA hsa-miR-125b ULBP1 miRanda miRanda
14034 chr6 150292903 150292903 1 + A G rs554921036 150292903 + 150292883 150292923 41 CTAGTAAAATAGCATGCTGGACTTCAGACCTCAGGGATCCT CTAGTAAAATAGCATGCTGGGCTTCAGACCTCAGGGATCCT Direct Loss 1 0.194759642644508 1 0.435960471630096 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 21 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150292903 chr6:150292903 . . 0 hm6A_associated_SNPs_132 0 0 1 4 150292896 150292919 mRNA hsa-miR-125a-5p ULBP1 miRanda miRanda
14034 chr6 150292903 150292903 1 + A G rs554921036 150292903 + 150292883 150292923 41 CTAGTAAAATAGCATGCTGGACTTCAGACCTCAGGGATCCT CTAGTAAAATAGCATGCTGGGCTTCAGACCTCAGGGATCCT Direct Loss 1 0.194759642644508 1 0.435960471630096 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 21 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150292903 chr6:150292903 . . 0 hm6A_associated_SNPs_132 0 0 1 4 150292884 150292903 mRNA hsa-miR-338-3p ULBP1 miRanda miRanda
14034 chr6 150292903 150292903 1 + A G rs554921036 150292903 + 150292883 150292923 41 CTAGTAAAATAGCATGCTGGACTTCAGACCTCAGGGATCCT CTAGTAAAATAGCATGCTGGGCTTCAGACCTCAGGGATCCT Direct Loss 1 0.194759642644508 1 0.435960471630096 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 21 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150292903 chr6:150292903 . . 0 hm6A_associated_SNPs_132 0 0 1 4 150292898 150292922 mRNA hsa-miR-504 ULBP1 miRanda miRanda
14034 chr7 935949 935949 1 + A G rs113185756 935949 + 935929 935969 41 TATTTTTTCACAGTTAAATGACAGTTGTAGATTGATACGCA TATTTTTTCACAGTTAAATGGCAGTTGTAGATTGATACGCA Direct Loss 1 0.833971358940578 1 0.93617045879364 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 GET4 ENSG00000164828;ENSG00000239857 UTR3 Human other chr7:935949 chr7:935949 . . 0 hm6A_associated_SNPs_134 0 0 1 1 935936 935962 mRNA hsa-miR-216a GET4 miRanda miRanda
14034 chr7 6200506 6200506 1 + A T rs575326198 6200506 + 6200486 6200526 41 GTAATGTTCCTCCAAGTTAGACATCTGGTGCAAGACCAACC GTAATGTTCCTCCAAGTTAGTCATCTGGTGCAAGACCAACC Direct Loss 1 0.823331237878334 1 0.924272119998932 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 USP42 ENSG00000106346 UTR3 Human protein_coding chr7:6200506 chr7:6200506 . . 0 hm6A_associated_SNPs_137 0 0 1 2 6200492 6200514 mRNA hsa-miR-199b-5p USP42 miRanda miRanda
14034 chr7 6200506 6200506 1 + A T rs575326198 6200506 + 6200486 6200526 41 GTAATGTTCCTCCAAGTTAGACATCTGGTGCAAGACCAACC GTAATGTTCCTCCAAGTTAGTCATCTGGTGCAAGACCAACC Direct Loss 1 0.823331237878334 1 0.924272119998932 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 USP42 ENSG00000106346 UTR3 Human protein_coding chr7:6200506 chr7:6200506 . . 0 hm6A_associated_SNPs_137 0 0 1 2 6200500 6200522 mRNA hsa-miR-431 USP42 miRanda miRanda
14034 chr7 23240268 23240268 1 + A T rs34902971 23240268 + 23240248 23240288 41 TTATTCACACCCAGAGATAAACTAACAGTAGAAGAACTGGA TTATTCACACCCAGAGATAATCTAACAGTAGAAGAACTGGA Direct Loss 1 0.910080994934057 1 0.98952180147171 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23240268 chr7:23240268 nonsynonymous SNV 0.914 1 hm6A_associated_SNPs_138 0 0 1 1 23240267 23240289 mRNA hsa-miR-145 NUPL2 miRanda miRanda
14034 chr7 29606886 29606886 1 + A C rs558116758 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGCCTATTAAAACCCTTGCACTG Direct Loss 1 0.0846013774825095 1 0.353086233139038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606886 . . 0 hm6A_associated_SNPs_140 0 0 0 7 29606886 29606907 mRNA hsa-miR-148a PRR15 miRanda miRanda
14034 chr7 29606886 29606886 1 + A C rs558116758 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGCCTATTAAAACCCTTGCACTG Direct Loss 1 0.0846013774825095 1 0.353086233139038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606886 . . 0 hm6A_associated_SNPs_140 0 0 0 7 29606882 29606906 mRNA hsa-miR-130a PRR15 miRanda miRanda
14034 chr7 29606886 29606886 1 + A C rs558116758 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGCCTATTAAAACCCTTGCACTG Direct Loss 1 0.0846013774825095 1 0.353086233139038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606886 . . 0 hm6A_associated_SNPs_140 0 0 0 7 29606884 29606906 mRNA hsa-miR-301a PRR15 miRanda miRanda
14034 chr7 29606886 29606886 1 + A C rs558116758 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGCCTATTAAAACCCTTGCACTG Direct Loss 1 0.0846013774825095 1 0.353086233139038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606886 . . 0 hm6A_associated_SNPs_140 0 0 0 7 29606885 29606906 mRNA hsa-miR-130b PRR15 miRanda miRanda
14034 chr7 29606886 29606886 1 + A C rs558116758 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGCCTATTAAAACCCTTGCACTG Direct Loss 1 0.0846013774825095 1 0.353086233139038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606886 . . 0 hm6A_associated_SNPs_140 0 0 0 7 29606886 29606907 mRNA hsa-miR-148b PRR15 miRanda miRanda
14034 chr7 29606886 29606886 1 + A C rs558116758 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGCCTATTAAAACCCTTGCACTG Direct Loss 1 0.0846013774825095 1 0.353086233139038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606886 . . 0 hm6A_associated_SNPs_140 0 0 0 7 29606884 29606906 mRNA hsa-miR-454 PRR15 miRanda miRanda
14034 chr7 29606886 29606886 1 + A C rs558116758 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGCCTATTAAAACCCTTGCACTG Direct Loss 1 0.0846013774825095 1 0.353086233139038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606886 . . 0 hm6A_associated_SNPs_140 0 0 0 7 29606884 29606906 mRNA hsa-miR-301b PRR15 miRanda miRanda
14034 chr7 111982877 111982877 1 + A G rs138058026 111982877 + 111982857 111982897 41 AAAGAACAATTTAAATTTGAACATCAACAAAAGATTGGTCC AAAGAACAATTTAAATTTGAGCATCAACAAAAGATTGGTCC Direct Loss 1 0.560797432455449 1 0.977736830711365 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 21 ZNF277 ENSG00000226851 ncRNA_intronic Human antisense chr7:111982877 chr7:111982877 . . 0 hm6A_associated_SNPs_148 0 0 1 1 111982866 111982886 mRNA hsa-miR-653 ZNF277 miRanda miRanda
14034 chr7 135360548 135360548 1 + A G rs144654187 135360548 + 135360528 135360568 41 AGTGATTCTGCTTCTCTTTGACAACTTGCATCTCTCCTACA AGTGATTCTGCTTCTCTTTGGCAACTTGCATCTCTCCTACA Direct Loss 1 0.0818971737887492 1 0.168925076723099 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 C7orf73 ENSG00000243317 downstream Human protein_coding chr7:135360548 chr7:135360548 . . 0 hm6A_associated_SNPs_151 0 0 1 2 135360545 135360565 mRNA hsa-miR-185 PL-5283 miRanda miRanda
14034 chr7 135360548 135360548 1 + A G rs144654187 135360548 + 135360528 135360568 41 AGTGATTCTGCTTCTCTTTGACAACTTGCATCTCTCCTACA AGTGATTCTGCTTCTCTTTGGCAACTTGCATCTCTCCTACA Direct Loss 1 0.0818971737887492 1 0.168925076723099 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 C7orf73 ENSG00000243317 downstream Human protein_coding chr7:135360548 chr7:135360548 . . 0 hm6A_associated_SNPs_151 0 0 1 2 135360535 135360555 mRNA hsa-miR-382 PL-5283 miRanda miRanda
14034 chr9 96327691 96327691 1 + A C rs11975 96327691 + 96327671 96327711 41 CGTCCTTTCTTCCATTCTTAACAGTATGTGCCCATTTGCAA CGTCCTTTCTTCCATTCTTACCAGTATGTGCCCATTTGCAA Direct Loss 1 0.555013529717023 1 0.565453290939331 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 21 FAM120A ENSG00000048828 UTR3 Human protein_coding chr9:96327691 chr9:96327691 . . 0 hm6A_associated_SNPs_169 0 1 1 2 96327691 96327712 mRNA hsa-miR-19a FAM120A miRanda miRanda
14034 chr9 96327691 96327691 1 + A C rs11975 96327691 + 96327671 96327711 41 CGTCCTTTCTTCCATTCTTAACAGTATGTGCCCATTTGCAA CGTCCTTTCTTCCATTCTTACCAGTATGTGCCCATTTGCAA Direct Loss 1 0.555013529717023 1 0.565453290939331 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 21 FAM120A ENSG00000048828 UTR3 Human protein_coding chr9:96327691 chr9:96327691 . . 0 hm6A_associated_SNPs_169 0 1 1 2 96327691 96327712 mRNA hsa-miR-19b FAM120A miRanda miRanda
14034 chr9 103339534 103339534 1 + A G rs73657327 103339534 + 103339514 103339554 41 GAAAATAGGCTGTTTAACAAACAGATTGGAATAAAGCCTAT GAAAATAGGCTGTTTAACAAGCAGATTGGAATAAAGCCTAT Direct Loss 1 0.16682276254478 1 0.635532915592194 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 MSANTD3-TMEFF1;TMEFF1 ENSG00000241697;ENSG00000251349 UTR3 Human other chr9:103339534 chr9:103339534 . . 0 hm6A_associated_SNPs_172 0 0 1 2 103339534 103339555 mRNA hsa-miR-135a TMEFF1 miRanda miRanda
14034 chr9 103339534 103339534 1 + A G rs73657327 103339534 + 103339514 103339554 41 GAAAATAGGCTGTTTAACAAACAGATTGGAATAAAGCCTAT GAAAATAGGCTGTTTAACAAGCAGATTGGAATAAAGCCTAT Direct Loss 1 0.16682276254478 1 0.635532915592194 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 MSANTD3-TMEFF1;TMEFF1 ENSG00000241697;ENSG00000251349 UTR3 Human other chr9:103339534 chr9:103339534 . . 0 hm6A_associated_SNPs_172 0 0 1 2 103339534 103339555 mRNA hsa-miR-135b TMEFF1 miRanda miRanda
14034 chr9 116303777 116303777 1 + A T rs41306696 116303777 + 116303757 116303797 41 GCATCCCCTACCACACAGTAACCTCACCTCAACTGGACCTG GCATCCCCTACCACACAGTATCCTCACCTCAACTGGACCTG Direct Loss 1 0.0910544107602867 1 0.908286988735199 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 RGS3 ENSG00000138835 UTR3 Human protein_coding chr9:116303777 chr9:116303777 . . 0 hm6A_associated_SNPs_173 0 0 0 6 116303765 116303787 mRNA hsa-let-7b RGS3 miRanda miRanda
14034 chr9 116303777 116303777 1 + A T rs41306696 116303777 + 116303757 116303797 41 GCATCCCCTACCACACAGTAACCTCACCTCAACTGGACCTG GCATCCCCTACCACACAGTATCCTCACCTCAACTGGACCTG Direct Loss 1 0.0910544107602867 1 0.908286988735199 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 RGS3 ENSG00000138835 UTR3 Human protein_coding chr9:116303777 chr9:116303777 . . 0 hm6A_associated_SNPs_173 0 0 0 6 116303765 116303787 mRNA hsa-let-7c RGS3 miRanda miRanda
14034 chr9 116303777 116303777 1 + A T rs41306696 116303777 + 116303757 116303797 41 GCATCCCCTACCACACAGTAACCTCACCTCAACTGGACCTG GCATCCCCTACCACACAGTATCCTCACCTCAACTGGACCTG Direct Loss 1 0.0910544107602867 1 0.908286988735199 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 RGS3 ENSG00000138835 UTR3 Human protein_coding chr9:116303777 chr9:116303777 . . 0 hm6A_associated_SNPs_173 0 0 0 6 116303765 116303787 mRNA hsa-let-7e RGS3 miRanda miRanda
14034 chr9 116303777 116303777 1 + A T rs41306696 116303777 + 116303757 116303797 41 GCATCCCCTACCACACAGTAACCTCACCTCAACTGGACCTG GCATCCCCTACCACACAGTATCCTCACCTCAACTGGACCTG Direct Loss 1 0.0910544107602867 1 0.908286988735199 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 RGS3 ENSG00000138835 UTR3 Human protein_coding chr9:116303777 chr9:116303777 . . 0 hm6A_associated_SNPs_173 0 0 0 6 116303765 116303787 mRNA hsa-let-7f RGS3 miRanda miRanda
14034 chr9 116303777 116303777 1 + A T rs41306696 116303777 + 116303757 116303797 41 GCATCCCCTACCACACAGTAACCTCACCTCAACTGGACCTG GCATCCCCTACCACACAGTATCCTCACCTCAACTGGACCTG Direct Loss 1 0.0910544107602867 1 0.908286988735199 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 RGS3 ENSG00000138835 UTR3 Human protein_coding chr9:116303777 chr9:116303777 . . 0 hm6A_associated_SNPs_173 0 0 0 6 116303763 116303787 mRNA hsa-let-7i RGS3 miRanda miRanda
14034 chr9 116303777 116303777 1 + A T rs41306696 116303777 + 116303757 116303797 41 GCATCCCCTACCACACAGTAACCTCACCTCAACTGGACCTG GCATCCCCTACCACACAGTATCCTCACCTCAACTGGACCTG Direct Loss 1 0.0910544107602867 1 0.908286988735199 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 RGS3 ENSG00000138835 UTR3 Human protein_coding chr9:116303777 chr9:116303777 . . 0 hm6A_associated_SNPs_173 0 0 0 6 116303772 116303794 mRNA hsa-miR-145 RGS3 miRanda miRanda
14034 chr9 132995622 132995622 1 + A C rs185182501 132995622 + 132995602 132995642 41 ACGTTTTAAAAGAAAAAAAAACAACTACCTTCTGTCCTAGA ACGTTTTAAAAGAAAAAAAACCAACTACCTTCTGTCCTAGA Direct Loss 1 0.817075478842527 1 0.99601674079895 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132995622 chr9:132995622 . . 0 hm6A_associated_SNPs_177 0 0 1 3 132995611 132995632 mRNA hsa-miR-196a NCS1 miRanda miRanda
14034 chr9 132995622 132995622 1 + A C rs185182501 132995622 + 132995602 132995642 41 ACGTTTTAAAAGAAAAAAAAACAACTACCTTCTGTCCTAGA ACGTTTTAAAAGAAAAAAAACCAACTACCTTCTGTCCTAGA Direct Loss 1 0.817075478842527 1 0.99601674079895 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132995622 chr9:132995622 . . 0 hm6A_associated_SNPs_177 0 0 1 3 132995607 132995630 mRNA hsa-miR-142-3p NCS1 miRanda miRanda
14034 chr9 132995622 132995622 1 + A C rs185182501 132995622 + 132995602 132995642 41 ACGTTTTAAAAGAAAAAAAAACAACTACCTTCTGTCCTAGA ACGTTTTAAAAGAAAAAAAACCAACTACCTTCTGTCCTAGA Direct Loss 1 0.817075478842527 1 0.99601674079895 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132995622 chr9:132995622 . . 0 hm6A_associated_SNPs_177 0 0 1 3 132995611 132995632 mRNA hsa-miR-196b NCS1 miRanda miRanda
14034 chr9 133995958 133995958 1 + A G rs113017234 133995958 + 133995938 133995978 41 CTCCCTGTGCAGAAGGGCTGACATCAAACCAAAAACTAGAG CTCCCTGTGCAGAAGGGCTGGCATCAAACCAAAAACTAGAG Direct Loss 1 0.430109799326812 1 0.158799022436142 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 AIF1L ENSG00000126878 UTR3 Human protein_coding chr9:133995958 chr9:133995958 . . 0 hm6A_associated_SNPs_178 0 0 1 1 133995945 133995965 mRNA hsa-miR-599 AIF1L miRanda miRanda
14034 chr10 17279416 17279416 1 + A T rs189996263 17279416 + 17279396 17279436 41 GGAATAAGCTCTAGTTCTTAACAACCGACACTCCTACAAGA GGAATAAGCTCTAGTTCTTATCAACCGACACTCCTACAAGA Direct Loss 1 0.638651131962776 1 0.819118857383728 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 VIM ENSG00000026025 UTR3 Human protein_coding chr10:17279416 chr10:17279416 . . 0 hm6A_associated_SNPs_187 0 0 1 1 17279409 17279430 mRNA hsa-miR-122 VIM miRanda miRanda
14034 chr10 91497207 91497207 1 + A G rs78963463 91497207 + 91497187 91497227 41 AAGTGAAGAAGTGCGACCGAACATTGCAGAAATTGAAGACA AAGTGAAGAAGTGCGACCGAGCATTGCAGAAATTGAAGACA Direct Loss 1 0.910789894225359 1 0.976712465286255 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 KIF20B ENSG00000138182 CDS Human protein_coding chr10:91497207 chr10:91497207 nonsynonymous SNV 0.005 0 hm6A_associated_SNPs_197 0 0 1 1 91497197 91497218 mRNA hsa-miR-544 KIF20B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524570 126524593 mRNA hsa-miR-148a FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524573 126524593 mRNA hsa-miR-152 FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524571 126524593 mRNA hsa-miR-302a FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524571 126524593 mRNA hsa-miR-302b FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524571 126524593 mRNA hsa-miR-302c FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524572 126524593 mRNA hsa-miR-302d FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524571 126524593 mRNA hsa-miR-372 FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524571 126524593 mRNA hsa-miR-373 FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524570 126524593 mRNA hsa-miR-148b FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524568 126524589 mRNA hsa-miR-324-5p FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524573 126524593 mRNA hsa-miR-520e FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524572 126524593 mRNA hsa-miR-520a-3p FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524573 126524593 mRNA hsa-miR-520b FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524572 126524593 mRNA hsa-miR-520c-3p FAM175B miRanda miRanda
14034 chr10 126524574 126524574 1 + A G rs145727957 126524574 + 126524554 126524594 41 TAATTGCAGTATGTGTAGAGACTCTCTTGGGATGCACTTAT TAATTGCAGTATGTGTAGAGGCTCTCTTGGGATGCACTTAT Direct Loss 1 0.289566874175309 1 0.0236821174621582 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524574 chr10:126524574 . . 0 hm6A_associated_SNPs_203 0 0 1 15 126524572 126524593 mRNA hsa-miR-520d-3p FAM175B miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914633 93914652 mRNA hsa-miR-148a PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914633 93914654 mRNA hsa-miR-128 PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914632 93914651 mRNA hsa-miR-130a PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914618 93914639 mRNA hsa-miR-140-5p PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914628 93914651 mRNA hsa-miR-301a PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914630 93914651 mRNA hsa-miR-130b PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914631 93914652 mRNA hsa-miR-148b PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914628 93914650 mRNA hsa-miR-505 PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914625 93914651 mRNA hsa-miR-454 PANX1 miRanda miRanda
14034 chr11 93914633 93914633 1 + A G rs141960320 93914633 + 93914613 93914653 41 TGGCTGATGGAAATCCCGTAACCACTATTTGTTGCACTGTG TGGCTGATGGAAATCCCGTAGCCACTATTTGTTGCACTGTG Direct Loss 1 0.365079772451024 1 0.539448499679565 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914633 chr11:93914633 . . 0 hm6A_associated_SNPs_218 0 0 1 10 93914628 93914651 mRNA hsa-miR-301b PANX1 miRanda miRanda
14034 chr11 117283055 117283055 1 + A G rs141750988 117283055 + 117283035 117283075 41 GTAAAGCCACACATTCTGTGACTATATAACCTATCTCAGGC GTAAAGCCACACATTCTGTGGCTATATAACCTATCTCAGGC Direct Loss 1 0.670298876799022 1 0.944358468055725 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 21 CEP164 ENSG00000110274 UTR3 Human protein_coding chr11:117283055 chr11:117283055 . . 0 hm6A_associated_SNPs_220 0 0 1 1 117283047 117283067 mRNA hsa-miR-154 CEP164 miRanda miRanda
14034 chr11 118987714 118987714 1 + A C rs562013379 118987714 + 118987694 118987734 41 TTTAGGGGCTTTATTTAAAGACTGTGATGATGGAGCCACGC TTTAGGGGCTTTATTTAAAGCCTGTGATGATGGAGCCACGC Direct Loss 1 0.255632470800566 1 0.0462815761566162 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 21 C2CD2L ENSG00000172375 UTR3 Human protein_coding chr11:118987714 chr11:118987714 . . 0 hm6A_associated_SNPs_221 0 0 1 2 118987701 118987721 mRNA hsa-miR-27a C2CD2L miRanda miRanda
14034 chr11 118987714 118987714 1 + A C rs562013379 118987714 + 118987694 118987734 41 TTTAGGGGCTTTATTTAAAGACTGTGATGATGGAGCCACGC TTTAGGGGCTTTATTTAAAGCCTGTGATGATGGAGCCACGC Direct Loss 1 0.255632470800566 1 0.0462815761566162 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 21 C2CD2L ENSG00000172375 UTR3 Human protein_coding chr11:118987714 chr11:118987714 . . 0 hm6A_associated_SNPs_221 0 0 1 2 118987701 118987721 mRNA hsa-miR-27b C2CD2L miRanda miRanda
14034 chr11 130013457 130013457 1 + A T rs116676856 130013457 + 130013437 130013477 41 GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTA GGGCTGCGTCTGACATCCTGTCCTCCTGGACTGTAGGACTA Direct Loss 1 0.637050899900536 1 0.991384148597717 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013457 chr11:130013457 . . 0 hm6A_associated_SNPs_222 0 0 1 3 130013440 130013462 mRNA hsa-let-7c APLP2 miRanda miRanda
14034 chr11 130013457 130013457 1 + A T rs116676856 130013457 + 130013437 130013477 41 GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTA GGGCTGCGTCTGACATCCTGTCCTCCTGGACTGTAGGACTA Direct Loss 1 0.637050899900536 1 0.991384148597717 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013457 chr11:130013457 . . 0 hm6A_associated_SNPs_222 0 0 1 3 130013440 130013462 mRNA hsa-let-7e APLP2 miRanda miRanda
14034 chr11 130013457 130013457 1 + A T rs116676856 130013457 + 130013437 130013477 41 GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTA GGGCTGCGTCTGACATCCTGTCCTCCTGGACTGTAGGACTA Direct Loss 1 0.637050899900536 1 0.991384148597717 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013457 chr11:130013457 . . 0 hm6A_associated_SNPs_222 0 0 1 3 130013451 130013473 mRNA hsa-miR-139-5p APLP2 miRanda miRanda
14034 chr11 130013701 130013701 1 + A G rs543285926 130013701 + 130013681 130013721 41 ATGTCGATTTTCAATAATAGACTTATATGCAGGCTGTCGTT ATGTCGATTTTCAATAATAGGCTTATATGCAGGCTGTCGTT Direct Loss 1 0.537038852403352 1 0.29278302192688 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013701 chr11:130013701 . . 0 hm6A_associated_SNPs_223 0 0 1 1 130013692 130013712 mRNA hsa-miR-448 APLP2 miRanda miRanda
14034 chr12 32896366 32896366 1 + A T rs3200103 32896366 + 32896346 32896386 41 GAGAACTATGTAATACTGAGACTTTGTTGACTCAAAACTTG GAGAACTATGTAATACTGAGTCTTTGTTGACTCAAAACTTG Direct Loss 1 0.847660922042132 1 0.866951823234558 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 21 DNM1L ENSG00000087470 UTR3 Human protein_coding chr12:32896366 chr12:32896366 . . 0 hm6A_associated_SNPs_231 3 0 1 1 32896355 32896377 mRNA hsa-miR-505 DNM1L miRanda miRanda
14034 chr12 124105114 124105114 1 + A G rs544819353 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGGCATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.0690835118293762 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105114 . . 0 hm6A_associated_SNPs_237 0 0 1 4 124105111 124105132 mRNA hsa-miR-374a DDX55 miRanda miRanda
14034 chr12 124105114 124105114 1 + A G rs544819353 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGGCATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.0690835118293762 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105114 . . 0 hm6A_associated_SNPs_237 0 0 1 4 124105113 124105133 mRNA hsa-miR-410 DDX55 miRanda miRanda
14034 chr12 124105114 124105114 1 + A G rs544819353 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGGCATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.0690835118293762 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105114 . . 0 hm6A_associated_SNPs_237 0 0 1 4 124105110 124105129 mRNA hsa-miR-190b DDX55 miRanda miRanda
14034 chr12 124105114 124105114 1 + A G rs544819353 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGGCATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.0690835118293762 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105114 . . 0 hm6A_associated_SNPs_237 0 0 1 4 124105111 124105132 mRNA hsa-miR-374b DDX55 miRanda miRanda
14034 chr13 31905449 31905449 1 + A T rs876540 31905449 + 31905429 31905469 41 AGTTCTGCTCTGGCCTACTAACTGTTACCACTGAGAGAACA AGTTCTGCTCTGGCCTACTATCTGTTACCACTGAGAGAACA Direct Loss 1 0.0815138518184546 1 0.91521680355072 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 B3GLCT ENSG00000187676 UTR3 Human protein_coding chr13:31905449 chr13:31905449 . . 0 hm6A_associated_SNPs_238 0 0 1 1 31905436 31905457 mRNA hsa-miR-194 B3GALTL miRanda miRanda
14034 chr14 100996558 100996558 1 + A C rs78644668 100996558 + 100996538 100996578 41 TTTGCCTCAGGAGTGTGAGGACTACACTAGTGAAAGCGCCT TTTGCCTCAGGAGTGTGAGGCCTACACTAGTGAAAGCGCCT Direct Loss 1 0.336305015042272 1 0.0909328162670135 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 WDR25 ENSG00000176473 UTR3 Human protein_coding chr14:100996558 chr14:100996558 . . 0 hm6A_associated_SNPs_251 0 0 1 1 100996543 100996566 mRNA hsa-miR-196a WDR25 miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770497 + 11770477 11770517 41 GCTACTACTGTAATGCGTGAACTAACAAACCTGTGAACTGT GCTACTACTGTAATGCGTGAGCTAACAAACCTGTGAACTGT Direct Loss 1 0.848095021313464 1 0.954108834266663 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770497 chr16:11770497 . . 0 hm6A_associated_SNPs_267 0 0 1 3 11770492 11770513 mRNA hsa-miR-27a SNN miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770497 + 11770477 11770517 41 GCTACTACTGTAATGCGTGAACTAACAAACCTGTGAACTGT GCTACTACTGTAATGCGTGAGCTAACAAACCTGTGAACTGT Direct Loss 1 0.848095021313464 1 0.954108834266663 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770497 chr16:11770497 . . 0 hm6A_associated_SNPs_267 0 0 1 3 11770492 11770513 mRNA hsa-miR-27b SNN miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770497 + 11770477 11770517 41 GCTACTACTGTAATGCGTGAACTAACAAACCTGTGAACTGT GCTACTACTGTAATGCGTGAGCTAACAAACCTGTGAACTGT Direct Loss 1 0.848095021313464 1 0.954108834266663 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770497 chr16:11770497 . . 0 hm6A_associated_SNPs_267 0 0 1 3 11770493 11770518 mRNA hsa-miR-181d SNN miRanda miRanda
14034 chr17 5336188 5336188 1 + A G rs1050456 5336188 + 5336168 5336208 41 AAAAATGATAATAAATGAGAACACAAAACATATAATTTAAA AAAAATGATAATAAATGAGAGCACAAAACATATAATTTAAA Direct Loss 1 0.195759642694291 1 0.064200758934021 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 C1QBP;RPAIN ENSG00000263272 ncRNA_exonic Human antisense chr17:5336188 chr17:5336188 . . 0 hm6A_associated_SNPs_282 0 0 1 3 5336181 5336202 mRNA hsa-miR-190 RPAIN miRanda miRanda
14034 chr17 5336188 5336188 1 + A G rs1050456 5336188 + 5336168 5336208 41 AAAAATGATAATAAATGAGAACACAAAACATATAATTTAAA AAAAATGATAATAAATGAGAGCACAAAACATATAATTTAAA Direct Loss 1 0.195759642694291 1 0.064200758934021 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 C1QBP;RPAIN ENSG00000263272 ncRNA_exonic Human antisense chr17:5336188 chr17:5336188 . . 0 hm6A_associated_SNPs_282 0 0 1 3 5336175 5336194 mRNA hsa-miR-599 RPAIN miRanda miRanda
14034 chr17 5336188 5336188 1 + A G rs1050456 5336188 + 5336168 5336208 41 AAAAATGATAATAAATGAGAACACAAAACATATAATTTAAA AAAAATGATAATAAATGAGAGCACAAAACATATAATTTAAA Direct Loss 1 0.195759642694291 1 0.064200758934021 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 C1QBP;RPAIN ENSG00000263272 ncRNA_exonic Human antisense chr17:5336188 chr17:5336188 . . 0 hm6A_associated_SNPs_282 0 0 1 3 5336182 5336202 mRNA hsa-miR-190b RPAIN miRanda miRanda
14034 chr17 28794736 28794736 1 + A G rs7226280 28794736 + 28794716 28794756 41 AGCTTATTGTGTTTGAGCTAACACCAGGTTACTCAGTAACC AGCTTATTGTGTTTGAGCTAGCACCAGGTTACTCAGTAACC Direct Loss 1 0.298694814873859 1 0.00356000661849976 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 CPD ENSG00000108582 UTR3 Human protein_coding chr17:28794736 chr17:28794736 . . 0 hm6A_associated_SNPs_289 0 0 1 1 28794723 28794746 mRNA hsa-miR-490-3p CPD miRanda miRanda
14034 chr19 1434781 1434781 1 + A C rs575023279 1434781 + 1434761 1434801 41 CTTCGGACAGGGCTTCTCAGACCCCAGCCAGCAGCCTCCTT CTTCGGACAGGGCTTCTCAGCCCCCAGCCAGCAGCCTCCTT Direct Loss 1 0.974368256763875 1 0.987908363342285 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434781 chr19:1434781 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_315 0 0 1 1 1434780 1434799 mRNA hsa-miR-485-5p DAZAP1 miRanda miRanda
14034 chr19 47712509 47712509 1 + A T rs111596279 47712509 + 47712489 47712529 41 AGTGCCTTGGCCCCAAGTGAACTCAAGATTTGGCAGCCCCA AGTGCCTTGGCCCCAAGTGATCTCAAGATTTGGCAGCCCCA Direct Loss 1 0.822659193855423 1 0.77542370557785 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 SAE1 ENSG00000142230 CDS Human protein_coding chr19:47712509 chr19:47712509 nonsynonymous SNV 0.519 0 hm6A_associated_SNPs_330 0 0 1 2 47712508 47712533 mRNA hsa-miR-330-5p SAE1 miRanda miRanda
14034 chr19 47712509 47712509 1 + A T rs111596279 47712509 + 47712489 47712529 41 AGTGCCTTGGCCCCAAGTGAACTCAAGATTTGGCAGCCCCA AGTGCCTTGGCCCCAAGTGATCTCAAGATTTGGCAGCCCCA Direct Loss 1 0.822659193855423 1 0.77542370557785 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 21 SAE1 ENSG00000142230 CDS Human protein_coding chr19:47712509 chr19:47712509 nonsynonymous SNV 0.519 0 hm6A_associated_SNPs_330 0 0 1 2 47712509 47712533 mRNA hsa-miR-330-5p SAE1 miRanda miRanda
14034 chr20 20013876 20013876 1 + A G rs553084681 20013876 + 20013856 20013896 41 ATACTCTAGATGCTTTATGGACAATATTATTTTCATTGGAT ATACTCTAGATGCTTTATGGGCAATATTATTTTCATTGGAT Direct Loss 1 0.934287762138866 1 0.17020383477211 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 21 NAA20 ENSG00000173418 UTR3 Human protein_coding chr20:20013876 chr20:20013876 . . 0 hm6A_associated_SNPs_335 0 0 1 1 20013861 20013882 mRNA hsa-miR-219-5p NAA20 miRanda miRanda
14034 chr20 30135990 30135990 1 + A G rs1115713 30135990 + 30135970 30136010 41 TAACAGATACTTTATAGAAAACAAATCAGGGTGCTCTTACC TAACAGATACTTTATAGAAAGCAAATCAGGGTGCTCTTACC Direct Loss 1 0.112848741627787 1 0.720471441745758 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 HM13 ENSG00000101294 intronic Human protein_coding chr20:30135990 chr20:30135990 . . 0 hm6A_associated_SNPs_336 0 0 1 1 30135987 30136008 mRNA hsa-miR-506 PSIMCT-1 miRanda miRanda
14034 chr20 31436589 31436589 1 + A C rs181293011 31436589 + 31436569 31436609 41 CACTCCAAATCATGTGCTTAACTGTAAAATACTCCCTTTTG CACTCCAAATCATGTGCTTACCTGTAAAATACTCCCTTTTG Direct Loss 1 0.839298306612503 1 0.968994498252869 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MAPRE1 ENSG00000260536 ncRNA_intronic Human antisense chr20:31436589 chr20:31436589 . . 0 hm6A_associated_SNPs_337 0 0 1 2 31436572 31436596 mRNA hsa-miR-139-5p MAPRE1 miRanda miRanda
14034 chr20 31436589 31436589 1 + A C rs181293011 31436589 + 31436569 31436609 41 CACTCCAAATCATGTGCTTAACTGTAAAATACTCCCTTTTG CACTCCAAATCATGTGCTTACCTGTAAAATACTCCCTTTTG Direct Loss 1 0.839298306612503 1 0.968994498252869 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MAPRE1 ENSG00000260536 ncRNA_intronic Human antisense chr20:31436589 chr20:31436589 . . 0 hm6A_associated_SNPs_337 0 0 1 2 31436582 31436603 mRNA hsa-miR-496 MAPRE1 miRanda miRanda
14034 chr20 42089710 42089710 1 + A G rs187173558 42089710 + 42089690 42089730 41 GTTCCAGAGATTAACTCAGAACTCCTTGTTTGCACATTATT GTTCCAGAGATTAACTCAGAGCTCCTTGTTTGCACATTATT Direct Loss 1 0.854167160028424 1 0.977786064147949 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 SRSF6 ENSG00000124193 UTR3 Human protein_coding chr20:42089710 chr20:42089710 . . 0 hm6A_associated_SNPs_340 0 0 1 2 42089704 42089725 mRNA hsa-miR-19a SFRS6 miRanda miRanda
14034 chr20 42089710 42089710 1 + A G rs187173558 42089710 + 42089690 42089730 41 GTTCCAGAGATTAACTCAGAACTCCTTGTTTGCACATTATT GTTCCAGAGATTAACTCAGAGCTCCTTGTTTGCACATTATT Direct Loss 1 0.854167160028424 1 0.977786064147949 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 SRSF6 ENSG00000124193 UTR3 Human protein_coding chr20:42089710 chr20:42089710 . . 0 hm6A_associated_SNPs_340 0 0 1 2 42089705 42089725 mRNA hsa-miR-19b SFRS6 miRanda miRanda
14034 chr20 43247487 43247487 1 + A T rs45560335 43247487 + 43247467 43247507 41 AGCAGATATGGAGAGAGCTGACAATCAATTCACATTTTTTA AGCAGATATGGAGAGAGCTGTCAATCAATTCACATTTTTTA Direct Loss 1 0.294903966477517 1 0.41490650177002 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 PKIG ENSG00000168734 UTR3 Human protein_coding chr20:43247487 chr20:43247487 . . 0 hm6A_associated_SNPs_341 0 0 1 1 43247473 43247493 mRNA hsa-miR-219-5p PKIG miRanda miRanda
14034 chr22 35789869 35789869 1 + A G rs11555832 35789869 + 35789849 35789889 41 CCTGCAGCAGAGCCTGGAAGACACCCTAATGTGGCAGCTGT CCTGCAGCAGAGCCTGGAAGGCACCCTAATGTGGCAGCTGT Direct Loss 1 0.476418277726215 1 0.722056031227112 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 21 HMOX1 ENSG00000100292 UTR3 Human protein_coding chr22:35789869 chr22:35789869 . . 0 hm6A_associated_SNPs_354 0 0 1 1 35789867 35789888 mRNA hsa-miR-22 HMOX1 miRanda miRanda
14034 chrX 16778527 16778527 1 + A C rs144608858 16778527 + 16778507 16778547 41 CCTTAACAGTCTGCAAACTGACATTAAATTCTAGATGTTGA CCTTAACAGTCTGCAAACTGCCATTAAATTCTAGATGTTGA Direct Loss 1 0.947186343398616 1 0.714800000190735 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 21 SYAP1 ENSG00000169895 UTR3 Human protein_coding chrX:16778527 chrX:16778527 . . 0 hm6A_associated_SNPs_360 0 0 1 1 16778509 16778529 mRNA hsa-miR-223 SYAP1 miRanda miRanda
14034 chrX 73219482 73219482 1 + A G rs186811586 73219482 + 73219462 73219502 41 AAGAAAAATGAAACACAGAAACACTCTAAATAAAAGAAGAT AAGAAAAATGAAACACAGAAGCACTCTAAATAAAAGAAGAT Direct Loss 1 0.662514203007109 1 0.621861338615417 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 JPX ENSG00000225470 ncRNA_exonic Human lincRNA chrX:73219482 chrX:73219482 . . 0 hm6A_associated_SNPs_362 0 0 1 1 73219471 73219489 mRNA hsa-miR-122 NCRNA00183 miRanda miRanda
14034 chrX 154005239 154005239 1 + A G rs7878787 154005239 + 154005219 154005259 41 GAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCA GAGTGGAACATAGGTCCTAGGCAGGGTGAAGAGTTCTGGCA Direct Loss 1 0.810335607183546 1 0.627191781997681 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 DKC1 ENSG00000130826 UTR3 Human protein_coding chrX:154005239 chrX:154005239 . . 0 hm6A_associated_SNPs_369 0 0 1 3 154005222 154005246 mRNA hsa-miR-10a DKC1 miRanda miRanda
14034 chrX 154005239 154005239 1 + A G rs7878787 154005239 + 154005219 154005259 41 GAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCA GAGTGGAACATAGGTCCTAGGCAGGGTGAAGAGTTCTGGCA Direct Loss 1 0.810335607183546 1 0.627191781997681 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 DKC1 ENSG00000130826 UTR3 Human protein_coding chrX:154005239 chrX:154005239 . . 0 hm6A_associated_SNPs_369 0 0 1 3 154005222 154005246 mRNA hsa-miR-10b DKC1 miRanda miRanda
14034 chrX 154005239 154005239 1 + A G rs7878787 154005239 + 154005219 154005259 41 GAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCA GAGTGGAACATAGGTCCTAGGCAGGGTGAAGAGTTCTGGCA Direct Loss 1 0.810335607183546 1 0.627191781997681 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 DKC1 ENSG00000130826 UTR3 Human protein_coding chrX:154005239 chrX:154005239 . . 0 hm6A_associated_SNPs_369 0 0 1 3 154005226 154005245 mRNA hsa-miR-339-5p DKC1 miRanda miRanda
14034 chr3 139065815 139065815 1 + A T BLCA 139065815 + 139065795 139065835 41 CAGGCTTGAACTTGCAGAAGACTTTTAAGCCAGCTATACAA CAGGCTTGAACTTGCAGAAGTCTTTTAAGCCAGCTATACAA Direct Loss 1 0.748763906175962 1 0.515078544616699 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065815 chr3:139065815 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_377 0 0 1 3 139065806 139065828 mRNA hsa-miR-135a MRPS22 miRanda miRanda
14034 chr3 139065815 139065815 1 + A T BLCA 139065815 + 139065795 139065835 41 CAGGCTTGAACTTGCAGAAGACTTTTAAGCCAGCTATACAA CAGGCTTGAACTTGCAGAAGTCTTTTAAGCCAGCTATACAA Direct Loss 1 0.748763906175962 1 0.515078544616699 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065815 chr3:139065815 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_377 0 0 1 3 139065805 139065828 mRNA hsa-miR-149 MRPS22 miRanda miRanda
14034 chr3 139065815 139065815 1 + A T BLCA 139065815 + 139065795 139065835 41 CAGGCTTGAACTTGCAGAAGACTTTTAAGCCAGCTATACAA CAGGCTTGAACTTGCAGAAGTCTTTTAAGCCAGCTATACAA Direct Loss 1 0.748763906175962 1 0.515078544616699 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065815 chr3:139065815 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_377 0 0 1 3 139065806 139065828 mRNA hsa-miR-135b MRPS22 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGGCAAGAAACATTCCAAACAAG Direct Loss 1 0.403741238228364 1 0.897018909454346 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272149 . . 0 hm6A_associated_SNPs_389 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGGCAAGAAACATTCCAAACAAG Direct Loss 1 0.403741238228364 1 0.897018909454346 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272149 . . 0 hm6A_associated_SNPs_389 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGGCAAGAAACATTCCAAACAAG Direct Loss 1 0.403741238228364 1 0.897018909454346 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272149 . . 0 hm6A_associated_SNPs_389 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGGCAAGAAACATTCCAAACAAG Direct Loss 1 0.403741238228364 1 0.897018909454346 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272149 . . 0 hm6A_associated_SNPs_389 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272149 65272149 1 + A G BLCA 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGGCAAGAAACATTCCAAACAAG Direct Loss 1 0.403741238228364 1 0.897018909454346 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272149 . . 0 hm6A_associated_SNPs_389 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272149 65272149 1 + A G BLCA 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGGCAAGAAACATTCCAAACAAG Direct Loss 1 0.403741238228364 1 0.897018909454346 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272149 . . 0 hm6A_associated_SNPs_389 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr2 190728532 190728532 1 + A G BLCA 190728532 + 190728512 190728552 41 CAAATGAAGAGAGCCATTGAACAGGAGTCACAAATGTCACT CAAATGAAGAGAGCCATTGAGCAGGAGTCACAAATGTCACT Direct Loss 1 0.867245300327217 1 0.844956278800964 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728532 chr2:190728532 synonymous SNV . 0 hm6A_associated_SNPs_390 0 0 1 4 190728523 190728543 mRNA hsa-miR-134 PMS1 miRanda miRanda
14034 chr2 190728532 190728532 1 + A G BLCA 190728532 + 190728512 190728552 41 CAAATGAAGAGAGCCATTGAACAGGAGTCACAAATGTCACT CAAATGAAGAGAGCCATTGAGCAGGAGTCACAAATGTCACT Direct Loss 1 0.867245300327217 1 0.844956278800964 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728532 chr2:190728532 synonymous SNV . 0 hm6A_associated_SNPs_390 0 0 1 4 190728516 190728541 mRNA hsa-miR-504 PMS1 miRanda miRanda
14034 chr2 190728532 190728532 1 + A G BLCA 190728532 + 190728512 190728552 41 CAAATGAAGAGAGCCATTGAACAGGAGTCACAAATGTCACT CAAATGAAGAGAGCCATTGAGCAGGAGTCACAAATGTCACT Direct Loss 1 0.867245300327217 1 0.844956278800964 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728532 chr2:190728532 synonymous SNV . 0 hm6A_associated_SNPs_390 0 0 1 4 190728530 190728552 mRNA hsa-miR-542-3p PMS1 miRanda miRanda
14034 chr2 190728532 190728532 1 + A G BLCA 190728532 + 190728512 190728552 41 CAAATGAAGAGAGCCATTGAACAGGAGTCACAAATGTCACT CAAATGAAGAGAGCCATTGAGCAGGAGTCACAAATGTCACT Direct Loss 1 0.867245300327217 1 0.844956278800964 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728532 chr2:190728532 synonymous SNV . 0 hm6A_associated_SNPs_390 0 0 1 4 190728523 190728545 mRNA hsa-miR-758 PMS1 miRanda miRanda
14034 chr5 96101008 96101008 1 + A G BRCA 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAGCCAATGGAAGATAAAGTAAA Direct Loss 1 0.147540874168965 1 0.891999483108521 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101008 synonymous SNV . 0 hm6A_associated_SNPs_407 0 0 1 1 96100995 96101018 mRNA hsa-miR-136 CAST miRanda miRanda
14034 chr5 180651352 180651352 1 + A G BRCA 180651352 + 180651332 180651372 41 CATGAGCAGGTCCAGCTGGGACAACATGGACTATGTGTGGG CATGAGCAGGTCCAGCTGGGGCAACATGGACTATGTGTGGG Direct Loss 1 0.834740289052919 1 0.998511791229248 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651352 chr5:180651352 nonsynonymous SNV 0.957 2 hm6A_associated_SNPs_420 0 0 1 1 180651339 180651362 mRNA hsa-miR-145 TRIM41 miRanda miRanda
14034 chr1 33292347 33292347 1 + A G CESC 33292347 + 33292327 33292367 41 GCCCCAGCTCTCTTCTTCAAACAATAACTTTCAACAGACTG GCCCCAGCTCTCTTCTTCAAGCAATAACTTTCAACAGACTG Direct Loss 1 0.803199183487668 1 0.990836024284363 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;Control 21 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292347 chr1:33292347 nonsynonymous SNV 0.756 1 hm6A_associated_SNPs_449 0 0 1 1 33292343 33292363 mRNA hsa-miR-653 S100PBP miRanda miRanda
14034 chr11 105967582 105967582 1 + A T COAD 105967582 + 105967562 105967602 41 TGAAGATCCTTCATTTTGGGACTGTTTTTGCTTCACAGAAG TGAAGATCCTTCATTTTGGGTCTGTTTTTGCTTCACAGAAG Direct Loss 1 0.864320880771644 1 0.799589931964874 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 AASDHPPT ENSG00000149313 CDS Human protein_coding chr11:105967582 chr11:105967582 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_472 0 0 1 2 105967567 105967588 mRNA hsa-miR-212 AASDHPPT miRanda miRanda
14034 chr11 105967582 105967582 1 + A T COAD 105967582 + 105967562 105967602 41 TGAAGATCCTTCATTTTGGGACTGTTTTTGCTTCACAGAAG TGAAGATCCTTCATTTTGGGTCTGTTTTTGCTTCACAGAAG Direct Loss 1 0.864320880771644 1 0.799589931964874 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 AASDHPPT ENSG00000149313 CDS Human protein_coding chr11:105967582 chr11:105967582 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_472 0 0 1 2 105967569 105967588 mRNA hsa-miR-132 AASDHPPT miRanda miRanda
14034 chr8 11683666 11683666 1 + A G COAD 11683666 + 11683646 11683686 41 CCTGTTTTTGCAGAAAACAAACATCATCCGTGACTATCTGG CCTGTTTTTGCAGAAAACAAGCATCATCCGTGACTATCTGG Direct Loss 1 0.78915617583255 1 0.891200840473175 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11683666 chr8:11683666 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_524 0 0 1 2 11683652 11683674 mRNA hsa-miR-190 FDFT1 miRanda miRanda
14034 chr8 11683666 11683666 1 + A G COAD 11683666 + 11683646 11683686 41 CCTGTTTTTGCAGAAAACAAACATCATCCGTGACTATCTGG CCTGTTTTTGCAGAAAACAAGCATCATCCGTGACTATCTGG Direct Loss 1 0.78915617583255 1 0.891200840473175 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11683666 chr8:11683666 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_524 0 0 1 2 11683653 11683674 mRNA hsa-miR-190b FDFT1 miRanda miRanda
14034 chr7 151791373 151791373 1 + A G COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGGCAGTTTTGCTTTTTGTTTAT Direct Loss 1 0.77744829939383 1 0.870864272117615 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791373 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_530 0 0 1 5 151791373 151791394 mRNA hsa-miR-30a GALNT11 miRanda miRanda
14034 chr7 151791373 151791373 1 + A G COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGGCAGTTTTGCTTTTTGTTTAT Direct Loss 1 0.77744829939383 1 0.870864272117615 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791373 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_530 0 0 1 5 151791369 151791394 mRNA hsa-miR-30c GALNT11 miRanda miRanda
14034 chr7 151791373 151791373 1 + A G COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGGCAGTTTTGCTTTTTGTTTAT Direct Loss 1 0.77744829939383 1 0.870864272117615 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791373 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_530 0 0 1 5 151791373 151791394 mRNA hsa-miR-30d GALNT11 miRanda miRanda
14034 chr7 151791373 151791373 1 + A G COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGGCAGTTTTGCTTTTTGTTTAT Direct Loss 1 0.77744829939383 1 0.870864272117615 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791373 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_530 0 0 1 5 151791373 151791394 mRNA hsa-miR-30b GALNT11 miRanda miRanda
14034 chr7 151791373 151791373 1 + A G COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGGCAGTTTTGCTTTTTGTTTAT Direct Loss 1 0.77744829939383 1 0.870864272117615 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791373 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_530 0 0 1 5 151791373 151791394 mRNA hsa-miR-30e GALNT11 miRanda miRanda
14034 chr10 99991390 99991390 1 + A G COAD 99991390 + 99991370 99991410 41 ACATGTCATTGAAATTTATGACTTTCCCCAAGAATTTCATA ACATGTCATTGAAATTTATGGCTTTCCCCAAGAATTTCATA Direct Loss 1 0.262955602963081 1 0.464751541614532 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 21 R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99991390 chr10:99991390 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_567 0 0 1 1 99991380 99991401 mRNA hsa-miR-491-5p C10orf28 miRanda miRanda
14034 chr3 124456926 124456926 1 + A G COAD 124456926 + 124456906 124456946 41 CAGCTAGCAGATGCTTTAGGACCTAGTATCTGCATGCTGAA CAGCTAGCAGATGCTTTAGGGCCTAGTATCTGCATGCTGAA Direct Loss 1 0.815134000514929 1 0.901269674301147 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 21 UMPS ENSG00000114491 CDS Human protein_coding chr3:124456926 chr3:124456926 synonymous SNV . 0 hm6A_associated_SNPs_574 0 0 1 1 124456922 124456944 mRNA hsa-miR-15a UMPS miRanda miRanda
14034 chr5 162945268 162945268 1 + A G COAD 162945268 + 162945248 162945288 41 TTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGA TTGACTGCTCCAAATTGGAGGCCTTGGGCATTGGCCAACGA Direct Loss 1 0.698732767276385 1 0.950154066085815 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945268 chr5:162945268 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_576 0 0 1 2 162945262 162945286 mRNA hsa-miR-182 MAT2B miRanda miRanda
14034 chr5 162945268 162945268 1 + A G COAD 162945268 + 162945248 162945288 41 TTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGA TTGACTGCTCCAAATTGGAGGCCTTGGGCATTGGCCAACGA Direct Loss 1 0.698732767276385 1 0.950154066085815 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945268 chr5:162945268 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_576 0 0 1 2 162945259 162945280 mRNA hsa-miR-365 MAT2B miRanda miRanda
14034 chr11 75719856 75719856 1 + A G COAD 75719856 + 75719836 75719876 41 TAATTAAATTCACAGAATGAACATAAGGATTACTTTGTATG TAATTAAATTCACAGAATGAGCATAAGGATTACTTTGTATG Direct Loss 1 0.369551601676166 1 0.118990778923035 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75719856 chr11:75719856 synonymous SNV . 0 hm6A_associated_SNPs_620 0 0 0 5 75719851 75719856 mRNA hsa-miR-181a UVRAG miRanda miRanda
14034 chr11 75719856 75719856 1 + A G COAD 75719856 + 75719836 75719876 41 TAATTAAATTCACAGAATGAACATAAGGATTACTTTGTATG TAATTAAATTCACAGAATGAGCATAAGGATTACTTTGTATG Direct Loss 1 0.369551601676166 1 0.118990778923035 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75719856 chr11:75719856 synonymous SNV . 0 hm6A_associated_SNPs_620 0 0 0 5 75719851 75719856 mRNA hsa-miR-181b UVRAG miRanda miRanda
14034 chr11 75719856 75719856 1 + A G COAD 75719856 + 75719836 75719876 41 TAATTAAATTCACAGAATGAACATAAGGATTACTTTGTATG TAATTAAATTCACAGAATGAGCATAAGGATTACTTTGTATG Direct Loss 1 0.369551601676166 1 0.118990778923035 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75719856 chr11:75719856 synonymous SNV . 0 hm6A_associated_SNPs_620 0 0 0 5 75719851 75719856 mRNA hsa-miR-181c UVRAG miRanda miRanda
14034 chr11 75719856 75719856 1 + A G COAD 75719856 + 75719836 75719876 41 TAATTAAATTCACAGAATGAACATAAGGATTACTTTGTATG TAATTAAATTCACAGAATGAGCATAAGGATTACTTTGTATG Direct Loss 1 0.369551601676166 1 0.118990778923035 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75719856 chr11:75719856 synonymous SNV . 0 hm6A_associated_SNPs_620 0 0 0 5 75719851 75719872 mRNA hsa-miR-186 UVRAG miRanda miRanda
14034 chr11 75719856 75719856 1 + A G COAD 75719856 + 75719836 75719876 41 TAATTAAATTCACAGAATGAACATAAGGATTACTTTGTATG TAATTAAATTCACAGAATGAGCATAAGGATTACTTTGTATG Direct Loss 1 0.369551601676166 1 0.118990778923035 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75719856 chr11:75719856 synonymous SNV . 0 hm6A_associated_SNPs_620 0 0 0 5 75719851 75719856 mRNA hsa-miR-181d UVRAG miRanda miRanda
14034 chr16 58552065 58552065 1 + A G COAD 58552065 + 58552045 58552085 41 CATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGA CATATGTACGGTTTTGTTGAGCCATATCCTGACAACACAGA Direct Loss 1 0.705400202295792 1 0.705908894538879 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 21 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552065 chr16:58552065 synonymous SNV . 0 hm6A_associated_SNPs_623 0 0 1 2 58552051 58552073 mRNA hsa-miR-190 SETD6 miRanda miRanda
14034 chr16 58552065 58552065 1 + A G COAD 58552065 + 58552045 58552085 41 CATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGA CATATGTACGGTTTTGTTGAGCCATATCCTGACAACACAGA Direct Loss 1 0.705400202295792 1 0.705908894538879 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 21 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552065 chr16:58552065 synonymous SNV . 0 hm6A_associated_SNPs_623 0 0 1 2 58552052 58552073 mRNA hsa-miR-190b SETD6 miRanda miRanda
14034 chr6 149699164 149699164 1 + A T GBM 149699164 + 149699144 149699184 41 GTTTTCATAGAATAATAATAACCTGGATGCCTGCTGTGCTG GTTTTCATAGAATAATAATATCCTGGATGCCTGCTGTGCTG Direct Loss 1 0.541046149078904 1 0.107674062252045 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 TAB2 ENSG00000055208 CDS Human protein_coding chr6:149699164 chr6:149699164 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_681 0 0 1 2 149699157 149699180 mRNA hsa-miR-214 TAB2 miRanda miRanda
14034 chr6 149699164 149699164 1 + A T GBM 149699164 + 149699144 149699184 41 GTTTTCATAGAATAATAATAACCTGGATGCCTGCTGTGCTG GTTTTCATAGAATAATAATATCCTGGATGCCTGCTGTGCTG Direct Loss 1 0.541046149078904 1 0.107674062252045 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 TAB2 ENSG00000055208 CDS Human protein_coding chr6:149699164 chr6:149699164 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_681 0 0 1 2 149699154 149699168 mRNA hsa-miR-154 TAB2 miRanda miRanda
14034 chr6 161470871 161470871 1 + A G GBM 161470871 + 161470851 161470891 41 GCTTTAGTAGACATTGTCTGACTTCTATTTATAGACCATTT GCTTTAGTAGACATTGTCTGGCTTCTATTTATAGACCATTT Direct Loss 1 0.756071832955973 1 0.874756813049316 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 21 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470871 chr6:161470871 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_697 0 0 1 1 161470861 161470884 mRNA hsa-miR-374a MAP3K4 miRanda miRanda
14034 chrX 73046727 73046727 1 - T C GBM 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA TAGAAGTCTTAAGACCTGGGGCAGGACACATGGAAGGCCTA Direct Loss 1 0.691808189589605 1 0.790980696678162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 21 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046727 . . 0 hm6A_associated_SNPs_710 0 0 1 2 73046707 73046727 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046727 73046727 1 - T C GBM 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA TAGAAGTCTTAAGACCTGGGGCAGGACACATGGAAGGCCTA Direct Loss 1 0.691808189589605 1 0.790980696678162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 21 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046727 . . 0 hm6A_associated_SNPs_710 0 0 1 2 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chr6 149699411 149699411 1 + A G GBM 149699411 + 149699391 149699431 41 GGTGGCCAGTCCAATAGTGAACTATTTCAGCAGGAGCCACA GGTGGCCAGTCCAATAGTGAGCTATTTCAGCAGGAGCCACA Direct Loss 1 0.89532150709005 1 0.936334848403931 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 21 TAB2 ENSG00000055208 CDS Human protein_coding chr6:149699411 chr6:149699411 synonymous SNV . 0 hm6A_associated_SNPs_716 0 0 1 1 149699403 149699425 mRNA hsa-miR-370 TAB2 miRanda miRanda
14034 chr15 92671628 92671628 1 + A C HNSC 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATACCTGTGAATGCCAAACCGATT Direct Loss 1 0.346811041719675 1 0.864529967308044 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671628 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_747 0 0 1 3 92671615 92671635 mRNA hsa-miR-27a SLCO3A1 miRanda miRanda
14034 chr15 92671628 92671628 1 + A C HNSC 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATACCTGTGAATGCCAAACCGATT Direct Loss 1 0.346811041719675 1 0.864529967308044 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671628 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_747 0 0 1 3 92671615 92671635 mRNA hsa-miR-27b SLCO3A1 miRanda miRanda
14034 chr15 92671628 92671628 1 + A C HNSC 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATACCTGTGAATGCCAAACCGATT Direct Loss 1 0.346811041719675 1 0.864529967308044 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671628 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_747 0 0 1 3 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr12 95694384 95694384 1 + A G KICH 95694384 + 95694364 95694404 41 TTACCACCATGCAGGAACAGACTTTTGGTGGTGAGGAGGAA TTACCACCATGCAGGAACAGGCTTTTGGTGGTGAGGAGGAA Direct Loss 1 0.954856945843961 1 0.985745191574097 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 VEZT ENSG00000028203 CDS Human protein_coding chr12:95694384 chr12:95694384 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_757 0 0 1 2 95694377 95694398 mRNA hsa-miR-197 VEZT miRanda miRanda
14034 chr12 95694384 95694384 1 + A G KICH 95694384 + 95694364 95694404 41 TTACCACCATGCAGGAACAGACTTTTGGTGGTGAGGAGGAA TTACCACCATGCAGGAACAGGCTTTTGGTGGTGAGGAGGAA Direct Loss 1 0.954856945843961 1 0.985745191574097 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 VEZT ENSG00000028203 CDS Human protein_coding chr12:95694384 chr12:95694384 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_757 0 0 1 2 95694365 95694388 mRNA hsa-miR-382 VEZT miRanda miRanda
14034 chr12 51450230 51450230 1 + A G LGG 51450230 + 51450210 51450250 41 AACTGTGATTCACCAACTGGACAAGGCTTTGGCAAAGCTGG AACTGTGATTCACCAACTGGGCAAGGCTTTGGCAAAGCTGG Direct Loss 1 0.89125172593021 1 0.0624764561653137 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 21 LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51450230 chr12:51450230 nonsynonymous SNV 0.080 4 hm6A_associated_SNPs_801 0 0 1 1 51450209 51450231 mRNA hsa-miR-145 LETMD1 miRanda miRanda
14034 chr5 34950354 34950354 1 + A G LGG 34950354 + 34950334 34950374 41 AGATACTAACTTAAATCAAGACAGTGCCAAAGAATTGGAAG AGATACTAACTTAAATCAAGGCAGTGCCAAAGAATTGGAAG Direct Loss 1 0.77143987841533 1 0.869403719902039 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34950354 chr5:34950354 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_812 0 0 1 2 34950341 34950364 mRNA hsa-miR-96 DNAJC21 miRanda miRanda
14034 chr5 34950354 34950354 1 + A G LGG 34950354 + 34950334 34950374 41 AGATACTAACTTAAATCAAGACAGTGCCAAAGAATTGGAAG AGATACTAACTTAAATCAAGGCAGTGCCAAAGAATTGGAAG Direct Loss 1 0.77143987841533 1 0.869403719902039 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34950354 chr5:34950354 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_812 0 0 1 2 34950343 34950364 mRNA hsa-miR-1271 DNAJC21 miRanda miRanda
14034 chr11 71169509 71169509 1 + A G LGG 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGGCACCCTCTTGCACTCGTTTC Direct Loss 1 0.502516198532981 1 0.892998933792114 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169509 nonsynonymous SNV 0.929 5 hm6A_associated_SNPs_826 0 0 1 5 71169503 71169524 mRNA hsa-miR-130a NADSYN1 miRanda miRanda
14034 chr11 71169509 71169509 1 + A G LGG 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGGCACCCTCTTGCACTCGTTTC Direct Loss 1 0.502516198532981 1 0.892998933792114 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169509 nonsynonymous SNV 0.929 5 hm6A_associated_SNPs_826 0 0 1 5 71169503 71169524 mRNA hsa-miR-301a NADSYN1 miRanda miRanda
14034 chr11 71169509 71169509 1 + A G LGG 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGGCACCCTCTTGCACTCGTTTC Direct Loss 1 0.502516198532981 1 0.892998933792114 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169509 nonsynonymous SNV 0.929 5 hm6A_associated_SNPs_826 0 0 1 5 71169504 71169524 mRNA hsa-miR-130b NADSYN1 miRanda miRanda
14034 chr11 71169509 71169509 1 + A G LGG 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGGCACCCTCTTGCACTCGTTTC Direct Loss 1 0.502516198532981 1 0.892998933792114 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169509 nonsynonymous SNV 0.929 5 hm6A_associated_SNPs_826 0 0 1 5 71169502 71169524 mRNA hsa-miR-454 NADSYN1 miRanda miRanda
14034 chr11 71169509 71169509 1 + A G LGG 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGGCACCCTCTTGCACTCGTTTC Direct Loss 1 0.502516198532981 1 0.892998933792114 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169509 nonsynonymous SNV 0.929 5 hm6A_associated_SNPs_826 0 0 1 5 71169503 71169524 mRNA hsa-miR-301b NADSYN1 miRanda miRanda
14034 chr16 85706072 85706072 1 + A G LIHC 85706072 + 85706052 85706092 41 GCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG GCGGCTCCAGGCAGAACTGGGCCACTTACGAAAGTGCCTTG Direct Loss 1 0.631378473656451 1 0.856140613555908 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 21 GSE1 ENSG00000131149 CDS Human protein_coding chr16:85706072 chr16:85706072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_845 0 0 1 2 85706072 85706092 mRNA hsa-miR-124 KIAA0182 miRanda miRanda
14034 chr16 85706072 85706072 1 + A G LIHC 85706072 + 85706052 85706092 41 GCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG GCGGCTCCAGGCAGAACTGGGCCACTTACGAAAGTGCCTTG Direct Loss 1 0.631378473656451 1 0.856140613555908 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 21 GSE1 ENSG00000131149 CDS Human protein_coding chr16:85706072 chr16:85706072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_845 0 0 1 2 85706072 85706092 mRNA hsa-miR-506 KIAA0182 miRanda miRanda
14034 chrX 149809800 149809800 1 + A G LIHC 149809800 + 149809780 149809820 41 TAAGTGCTATGAGCTCTGTGACACTTACCCTGCTCTTTTGG TAAGTGCTATGAGCTCTGTGGCACTTACCCTGCTCTTTTGG Direct Loss 1 0.541897077556769 1 0.863083600997925 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149809800 chrX:149809800 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_858 0 0 0 1 149809785 149809808 mRNA hsa-miR-142-3p MTM1 miRanda miRanda
14034 chr2 106509478 106509478 1 + A G LIHC 106509478 + 106509458 106509498 41 CCTTAAAGCGTCAGGGAAGAACAAACACTTCAAGGTGCAGC CCTTAAAGCGTCAGGGAAGAGCAAACACTTCAAGGTGCAGC Direct Loss 1 0.796371878451023 1 0.899011194705963 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 NCK2 ENSG00000071051 CDS Human protein_coding chr2:106509478 chr2:106509478 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_869 0 0 1 1 106509464 106509482 mRNA hsa-miR-375 NCK2 miRanda miRanda
14034 chr18 23866170 23866170 1 + A G LIHC 23866170 + 23866150 23866190 41 CTGGAACTGGTTTGCTTCAGACTTCAAAACCACTTGTGACA CTGGAACTGGTTTGCTTCAGGCTTCAAAACCACTTGTGACA Direct Loss 1 0.714051747048636 1 0.995739698410034 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23866170 chr18:23866170 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_884 0 0 1 1 23866163 23866184 mRNA hsa-miR-140-5p TAF4B miRanda miRanda
14034 chr6 4032267 4032267 1 + A G LIHC 4032267 + 4032247 4032287 41 AGTACAAAGGGGAAACTTGAACTTGTGGACAATAAAATTAC AGTACAAAGGGGAAACTTGAGCTTGTGGACAATAAAATTAC Direct Loss 1 0.867527124906643 1 0.983098924160004 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4032267 chr6:4032267 synonymous SNV . 0 hm6A_associated_SNPs_901 0 0 1 1 4032263 4032286 mRNA hsa-miR-590-3p PRPF4B miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905900 149905920 mRNA hsa-miR-148a MTMR1 miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905894 149905920 mRNA hsa-miR-130a MTMR1 miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905901 149905920 mRNA hsa-miR-152 MTMR1 miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905899 149905920 mRNA hsa-miR-301a MTMR1 miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905899 149905920 mRNA hsa-miR-130b MTMR1 miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905900 149905920 mRNA hsa-miR-148b MTMR1 miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905898 149905920 mRNA hsa-miR-454 MTMR1 miRanda miRanda
14034 chrX 149905905 149905905 1 + A G LIHC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGGCACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.788885891437531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905905 synonymous SNV . 0 hm6A_associated_SNPs_910 0 0 0 8 149905898 149905920 mRNA hsa-miR-301b MTMR1 miRanda miRanda
14034 chr11 13408275 13408275 1 + A G LIHC 13408275 + 13408255 13408295 41 TGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGC TGGACTGGGTGGCCCTGTTGGCTTTAGTGACTTGCCATGGC Direct Loss 1 0.786766123012019 1 0.971476316452026 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13408275 chr11:13408275 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_926 0 0 0 3 13408269 13408288 mRNA hsa-miR-224 ARNTL miRanda miRanda
14034 chr11 13408275 13408275 1 + A G LIHC 13408275 + 13408255 13408295 41 TGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGC TGGACTGGGTGGCCCTGTTGGCTTTAGTGACTTGCCATGGC Direct Loss 1 0.786766123012019 1 0.971476316452026 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13408275 chr11:13408275 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_926 0 0 0 3 13408253 13408277 mRNA hsa-miR-505 ARNTL miRanda miRanda
14034 chr11 13408275 13408275 1 + A G LIHC 13408275 + 13408255 13408295 41 TGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGC TGGACTGGGTGGCCCTGTTGGCTTTAGTGACTTGCCATGGC Direct Loss 1 0.786766123012019 1 0.971476316452026 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13408275 chr11:13408275 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_926 0 0 0 3 13408251 13408276 mRNA hsa-miR-421 ARNTL miRanda miRanda
14034 chrX 149828870 149828870 1 + A G LIHC 149828870 + 149828850 149828890 41 ACAGCTTTTGAATTCAATGAACAATTTTTGATTATAATTTT ACAGCTTTTGAATTCAATGAGCAATTTTTGATTATAATTTT Direct Loss 1 0.558565411878718 1 0.0217363834381104 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149828870 chrX:149828870 synonymous SNV . 0 hm6A_associated_SNPs_932 0 0 0 2 149828865 149828886 mRNA hsa-miR-374a MTM1 miRanda miRanda
14034 chrX 149828870 149828870 1 + A G LIHC 149828870 + 149828850 149828890 41 ACAGCTTTTGAATTCAATGAACAATTTTTGATTATAATTTT ACAGCTTTTGAATTCAATGAGCAATTTTTGATTATAATTTT Direct Loss 1 0.558565411878718 1 0.0217363834381104 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149828870 chrX:149828870 synonymous SNV . 0 hm6A_associated_SNPs_932 0 0 0 2 149828865 149828886 mRNA hsa-miR-374b MTM1 miRanda miRanda
14034 chr15 65847232 65847232 1 + A T LUAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGTCATGGTGCCAAAGGAGACAA Direct Loss 1 0.611883913754643 1 0.00750315189361572 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847232 synonymous SNV . 0 hm6A_associated_SNPs_965 0 0 1 7 65847225 65847242 mRNA hsa-miR-29a PTPLAD1 miRanda miRanda
14034 chr15 65847232 65847232 1 + A T LUAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGTCATGGTGCCAAAGGAGACAA Direct Loss 1 0.611883913754643 1 0.00750315189361572 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847232 synonymous SNV . 0 hm6A_associated_SNPs_965 0 0 1 7 65847225 65847244 mRNA hsa-miR-96 PTPLAD1 miRanda miRanda
14034 chr15 65847232 65847232 1 + A T LUAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGTCATGGTGCCAAAGGAGACAA Direct Loss 1 0.611883913754643 1 0.00750315189361572 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847232 synonymous SNV . 0 hm6A_associated_SNPs_965 0 0 1 7 65847225 65847242 mRNA hsa-miR-29b PTPLAD1 miRanda miRanda
14034 chr15 65847232 65847232 1 + A T LUAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGTCATGGTGCCAAAGGAGACAA Direct Loss 1 0.611883913754643 1 0.00750315189361572 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847232 synonymous SNV . 0 hm6A_associated_SNPs_965 0 0 1 7 65847228 65847250 mRNA hsa-miR-204 PTPLAD1 miRanda miRanda
14034 chr15 65847232 65847232 1 + A T LUAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGTCATGGTGCCAAAGGAGACAA Direct Loss 1 0.611883913754643 1 0.00750315189361572 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847232 synonymous SNV . 0 hm6A_associated_SNPs_965 0 0 1 7 65847227 65847250 mRNA hsa-miR-211 PTPLAD1 miRanda miRanda
14034 chr15 65847232 65847232 1 + A T LUAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGTCATGGTGCCAAAGGAGACAA Direct Loss 1 0.611883913754643 1 0.00750315189361572 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847232 synonymous SNV . 0 hm6A_associated_SNPs_965 0 0 1 7 65847225 65847242 mRNA hsa-miR-29c PTPLAD1 miRanda miRanda
14034 chr15 65847232 65847232 1 + A T LUAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGTCATGGTGCCAAAGGAGACAA Direct Loss 1 0.611883913754643 1 0.00750315189361572 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847232 synonymous SNV . 0 hm6A_associated_SNPs_965 0 0 1 7 65847225 65847244 mRNA hsa-miR-1271 PTPLAD1 miRanda miRanda
14034 chr17 8193136 8193136 1 + A G LUAD 8193136 + 8193116 8193156 41 TTCCCCCACCCCAAGCCCTGACAACAGGTCATCTCTTGGCC TTCCCCCACCCCAAGCCCTGGCAACAGGTCATCTCTTGGCC Direct Loss 1 0.833985054722058 1 0.0844865739345551 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 RANGRF ENSG00000108961 CDS Human protein_coding chr17:8193136 chr17:8193136 stoploss 0.402 0 hm6A_associated_SNPs_974 0 0 1 1 8193134 8193151 mRNA hsa-miR-143 RANGRF miRanda miRanda
14034 chr1 82456281 82456281 1 + A T LUAD 82456281 + 82456261 82456301 41 ACTTACGGGGCAGCAGCAAGACTCACAACCTCGAGCTCACG ACTTACGGGGCAGCAGCAAGTCTCACAACCTCGAGCTCACG Direct Loss 1 0.724627036655191 1 0.994479179382324 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456281 chr1:82456281 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_988 0 0 1 1 82456264 82456283 mRNA hsa-miR-431 LPHN2 miRanda miRanda
14034 chr17 52993207 52993207 1 + A T LUAD 52993207 + 52993187 52993227 41 TGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGGTGT TGGGTCTGAAAACCATGAAGTCATAGAGCTTCTGCAGGTGT Direct Loss 1 0.855087302015056 1 0.476882725954056 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 21 TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52993207 chr17:52993207 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_998 0 0 1 1 52993205 52993223 mRNA hsa-miR-544 TOM1L1 miRanda miRanda
14034 chr7 135328039 135328039 1 + A G LUAD 135328039 + 135328019 135328059 41 TGATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA TGATTTCTTCAGCTATTATGGCAGTCATCGACAGAGTGTCA Direct Loss 1 0.689856937028851 1 0.499043762683868 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328039 chr7:135328039 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_999 0 0 1 1 135328022 135328044 mRNA hsa-miR-217 NUP205 miRanda miRanda
14034 chr10 115668189 115668189 1 + A T LUAD 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGTCAGCAGTGCTTGTATGATGA Direct Loss 1 0.648379884163114 1 0.048473447561264 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 21 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668189 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_1005 0 0 1 2 115668185 115668205 mRNA hsa-miR-381 NHLRC2 miRanda miRanda
14034 chr10 115668189 115668189 1 + A T LUAD 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGTCAGCAGTGCTTGTATGATGA Direct Loss 1 0.648379884163114 1 0.048473447561264 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 21 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668189 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_1005 0 0 1 2 115668185 115668205 mRNA hsa-miR-300 NHLRC2 miRanda miRanda
14034 chr6 135515583 135515583 1 + A T LUAD 135515583 + 135515563 135515603 41 ACCGAGAATGAGCTAAAAGGACAGCAGGTGCTACCAGTAAG ACCGAGAATGAGCTAAAAGGTCAGCAGGTGCTACCAGTAAG Direct Loss 1 0.542566848391899 1 0.689352929592133 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 21 MYB ENSG00000118513 CDS Human protein_coding chr6:135515583 chr6:135515583 synonymous SNV . 0 hm6A_associated_SNPs_1016 0 0 1 1 135515570 135515591 mRNA hsa-miR-370 MYB miRanda miRanda
14034 chr4 115544374 115544374 1 + A T LUAD 115544374 + 115544354 115544394 41 ACTGGATCACTATACTAAGAACTGTGACCTGATGGTTGGCA ACTGGATCACTATACTAAGATCTGTGACCTGATGGTTGGCA Direct Loss 1 0.680482537425787 1 0.993755221366882 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544374 chr4:115544374 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_1019 0 0 1 2 115544362 115544381 mRNA hsa-miR-27a UGT8 miRanda miRanda
14034 chr4 115544374 115544374 1 + A T LUAD 115544374 + 115544354 115544394 41 ACTGGATCACTATACTAAGAACTGTGACCTGATGGTTGGCA ACTGGATCACTATACTAAGATCTGTGACCTGATGGTTGGCA Direct Loss 1 0.680482537425787 1 0.993755221366882 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544374 chr4:115544374 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_1019 0 0 1 2 115544362 115544381 mRNA hsa-miR-27b UGT8 miRanda miRanda
14034 chr8 144103018 144103018 1 + A G LUSC 144103018 + 144102998 144103038 41 TTGGCCACAGCCTGAGCAAGACCTGTTCCCCGGCCTGCCCC TTGGCCACAGCCTGAGCAAGGCCTGTTCCCCGGCCTGCCCC Direct Loss 1 0.640693300806193 1 0.827779293060303 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 21 LY6E ENSG00000160932 CDS Human protein_coding chr8:144103018 chr8:144103018 nonsynonymous SNV 0.991 0 hm6A_associated_SNPs_1039 0 0 1 1 144102998 144103020 mRNA hsa-miR-431 LY6E miRanda miRanda
14034 chr4 52777264 52777264 1 + A G LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAGCACTGCCAAGTGCATGTTGG Direct Loss 1 0.585354873458178 1 0.829901456832886 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777264 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_1042 0 0 1 4 52777249 52777272 mRNA hsa-miR-34a DCUN1D4 miRanda miRanda
14034 chr4 52777264 52777264 1 + A G LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAGCACTGCCAAGTGCATGTTGG Direct Loss 1 0.585354873458178 1 0.829901456832886 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777264 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_1042 0 0 1 4 52777245 52777272 mRNA hsa-miR-34c-5p DCUN1D4 miRanda miRanda
14034 chr4 52777264 52777264 1 + A G LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAGCACTGCCAAGTGCATGTTGG Direct Loss 1 0.585354873458178 1 0.829901456832886 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777264 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_1042 0 0 1 4 52777248 52777272 mRNA hsa-miR-449a DCUN1D4 miRanda miRanda
14034 chr4 52777264 52777264 1 + A G LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAGCACTGCCAAGTGCATGTTGG Direct Loss 1 0.585354873458178 1 0.829901456832886 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777264 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_1042 0 0 1 4 52777248 52777272 mRNA hsa-miR-449b DCUN1D4 miRanda miRanda
14034 chr5 170395346 170395346 1 + A G LUSC 170395346 + 170395326 170395366 41 TCTTGGATCAGTTTCGTAAAACATATGTTGGTGATCAACTT TCTTGGATCAGTTTCGTAAAGCATATGTTGGTGATCAACTT Direct Loss 1 0.288460986597922 1 0.364254117012024 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 RANBP17 ENSG00000204764 CDS Human protein_coding chr5:170395346 chr5:170395346 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_1082 0 0 1 1 170395345 170395367 mRNA hsa-miR-382 RANBP17 miRanda miRanda
14034 chr13 103524601 103524601 1 + A G LUSC 103524601 + 103524581 103524621 41 GATAAGACCTAATCCTCATGACACCAAAGTGAAAAAAAAAT GATAAGACCTAATCCTCATGGCACCAAAGTGAAAAAAAAAT Direct Loss 1 0.680182524236504 1 0.695422232151031 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 21 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103524601 chr13:103524601 nonsynonymous SNV 0.978 3 hm6A_associated_SNPs_1093 0 0 0 1 103524588 103524610 mRNA hsa-miR-9 ERCC5 miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRA@ miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAV20 miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRDV2 miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAJ17 miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAC miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRA@ miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAV20 miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRDV2 miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAJ17 miRanda miRanda
14034 chr14 23020859 23020859 1 + A G OV 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCTGCTCCCCAGAGGCTGCCTCCGCCATCCCACAG Direct Loss 1 0.232546364840759 1 0.523077845573425 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020859 . . 0 hm6A_associated_SNPs_1141 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAC miRanda miRanda
14034 chr17 26495604 26495604 1 + A G PAAD 26495604 + 26495584 26495624 41 TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATGTA TCATTACAGCAATGCTATTGGCATCTGGTCTGTGGGATGTA Direct Loss 1 0.662866301003746 1 0.0501343011856079 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 21 NLK ENSG00000087095 CDS Human protein_coding chr17:26495604 chr17:26495604 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1152 0 0 1 2 26495587 26495612 mRNA hsa-miR-199b-5p NLK miRanda miRanda
14034 chr17 26495604 26495604 1 + A G PAAD 26495604 + 26495584 26495624 41 TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATGTA TCATTACAGCAATGCTATTGGCATCTGGTCTGTGGGATGTA Direct Loss 1 0.662866301003746 1 0.0501343011856079 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 21 NLK ENSG00000087095 CDS Human protein_coding chr17:26495604 chr17:26495604 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1152 0 0 1 2 26495602 26495624 mRNA hsa-miR-324-5p NLK miRanda miRanda
14034 chr8 64122451 64122451 1 + A T SARC 64122451 + 64122431 64122471 41 GCCCTTATACTCTTCACCAAACACACTTGAGAACTGTAACT GCCCTTATACTCTTCACCAATCACACTTGAGAACTGTAACT Direct Loss 1 0.928999501640357 1 0.948056638240814 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 21 YTHDF3 ENSG00000185728 UTR3 Human protein_coding chr8:64122451 chr8:64122451 . . 0 hm6A_associated_SNPs_1183 0 0 1 1 64122439 64122459 mRNA hsa-miR-382 YTHDF3 miRanda miRanda
14034 chr17 30510212 30510212 1 + A G SKCM 30510212 + 30510192 30510232 41 TTCAGCGAAAAACCTGAAGAACATATCAGAGCTCTTTTATT TTCAGCGAAAAACCTGAAGAGCATATCAGAGCTCTTTTATT Direct Loss 1 0.659476523539746 1 0.712309300899506 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30510212 chr17:30510212 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_1216 0 0 1 2 30510198 30510219 mRNA hsa-miR-190 RHOT1 miRanda miRanda
14034 chr17 30510212 30510212 1 + A G SKCM 30510212 + 30510192 30510232 41 TTCAGCGAAAAACCTGAAGAACATATCAGAGCTCTTTTATT TTCAGCGAAAAACCTGAAGAGCATATCAGAGCTCTTTTATT Direct Loss 1 0.659476523539746 1 0.712309300899506 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30510212 chr17:30510212 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_1216 0 0 1 2 30510199 30510219 mRNA hsa-miR-190b RHOT1 miRanda miRanda
14034 chr15 66180171 66180171 1 + A G STAD 66180171 + 66180151 66180191 41 AAAGGTGCAGTGCTGTCAGAACATCTAAGGCATTTCTCTTC AAAGGTGCAGTGCTGTCAGAGCATCTAAGGCATTTCTCTTC Direct Loss 1 0.726223038524899 1 0.251648247241974 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RAB11A ENSG00000103769 CDS Human protein_coding chr15:66180171 chr15:66180171 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_1254 0 0 1 1 66180169 66180189 mRNA hsa-miR-539 RAB11A miRanda miRanda
14034 chr9 127995981 127995981 1 + A G STAD 127995981 + 127995961 127996001 41 ACATAGAAGAGCAGCATTGGACCTTGCTTAAATTTGATACT ACATAGAAGAGCAGCATTGGGCCTTGCTTAAATTTGATACT Direct Loss 1 0.519176385035422 1 0.790060997009277 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127995981 chr9:127995981 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_1259 0 0 1 1 127995980 127996003 mRNA hsa-miR-496 RABEPK miRanda miRanda
14034 chr7 135333207 135333207 1 + A T STAD 135333207 + 135333187 135333227 41 ACTACAAAAGAAACTTCTGGACATTGAAGGATTATATTCAA ACTACAAAAGAAACTTCTGGTCATTGAAGGATTATATTCAA Direct Loss 1 0.943887489752876 1 0.912665188312531 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 21 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135333207 chr7:135333207 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_1269 0 0 1 1 135333196 135333217 mRNA hsa-miR-205 NUP205 miRanda miRanda
14034 chr14 72926380 72926380 1 + A C STAD 72926380 + 72926360 72926400 41 GAACTGCTGGGAACCTGAAAACACTGACTATGGTGAGAACT GAACTGCTGGGAACCTGAAACCACTGACTATGGTGAGAACT Direct Loss 1 0.13917163820067 1 0.431997358798981 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 RGS6 ENSG00000182732 CDS Human protein_coding chr14:72926380 chr14:72926380 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1298 0 0 0 1 72926366 72926388 mRNA hsa-miR-223 RGS6 miRanda miRanda
14034 chr9 35661172 35661172 1 - T A STAD 35661172 - 35661152 35661192 41 GCACTCCATCATGAAAACAGACTTTGTTTTAGTCGACCTTC GCACTCCATCATGAAAACAGTCTTTGTTTTAGTCGACCTTC Direct Loss 1 0.600663481699959 1 0.661059021949768 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661172 chr9:35661172 nonsynonymous SNV 0.708 1 hm6A_associated_SNPs_1301 0 0 0 1 35661168 35661192 mRNA hsa-miR-382 C9orf100 miRanda miRanda
14034 chr13 73357645 73357645 1 + A G STAD 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAAAAAAGTGAGCATCTCTAGTTCTCTGGAAT Direct Loss 1 0.396384350237289 1 0.657904624938965 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357645 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_1314 0 0 1 3 73357636 73357660 mRNA hsa-miR-146a PIBF1 miRanda miRanda
14034 chr13 73357645 73357645 1 + A G STAD 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAAAAAAGTGAGCATCTCTAGTTCTCTGGAAT Direct Loss 1 0.396384350237289 1 0.657904624938965 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357645 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_1314 0 0 1 3 73357636 73357660 mRNA hsa-miR-146b-5p PIBF1 miRanda miRanda
14034 chr13 73357645 73357645 1 + A G STAD 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAAAAAAGTGAGCATCTCTAGTTCTCTGGAAT Direct Loss 1 0.396384350237289 1 0.657904624938965 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357645 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_1314 0 0 1 3 73357641 73357662 mRNA hsa-miR-873 PIBF1 miRanda miRanda
14034 chr17 29061944 29061944 1 + A G STAD 29061944 + 29061924 29061964 41 AGATCTATAGATTTCTTTGAACTCGGAATCTCATAGCAGTA AGATCTATAGATTTCTTTGAGCTCGGAATCTCATAGCAGTA Direct Loss 1 0.0836156775864467 1 0.272223353385925 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29061944 chr17:29061944 . . 0 hm6A_associated_SNPs_1318 0 0 1 1 29061930 29061951 mRNA hsa-miR-145 SUZ12P miRanda miRanda
14034 chr10 70513668 70513668 1 + A G STAD 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATTTGTATATACCTAGTGGCTTTTTTGATGCTCAATTTA Direct Loss 1 0.442584924726758 1 0.678282141685486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513668 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1336 0 0 1 1 70513652 70513672 mRNA hsa-miR-224 CCAR1 miRanda miRanda
14034 chr3 160132281 160132281 1 + A C STAD 160132281 + 160132261 160132301 41 AAAGCCAAAAAACTGGAGAAACAACTTCAAAAAGATAAAGA AAAGCCAAAAAACTGGAGAACCAACTTCAAAAAGATAAAGA Direct Loss 1 0.509608719634414 1 0.353843241930008 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 21 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132281 chr3:160132281 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_1340 0 0 1 2 160132274 160132294 mRNA hsa-miR-129-5p SMC4 miRanda miRanda
14034 chr3 160132281 160132281 1 + A C STAD 160132281 + 160132261 160132301 41 AAAGCCAAAAAACTGGAGAAACAACTTCAAAAAGATAAAGA AAAGCCAAAAAACTGGAGAACCAACTTCAAAAAGATAAAGA Direct Loss 1 0.509608719634414 1 0.353843241930008 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 21 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132281 chr3:160132281 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_1340 0 0 1 2 160132268 160132288 mRNA hsa-miR-382 SMC4 miRanda miRanda
14034 chr13 73369627 73369627 1 + A G STAD 73369627 + 73369607 73369647 41 ACCTGCGTGACTTTGAGTTGACAGAAGAGCAATATATTAAA ACCTGCGTGACTTTGAGTTGGCAGAAGAGCAATATATTAAA Direct Loss 1 0.298044999089259 1 0.499268084764481 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 21 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73369627 chr13:73369627 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_1370 0 0 1 1 73369619 73369641 mRNA hsa-miR-137 PIBF1 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906034 + 222906014 222906054 41 AGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCCT AGACATCAAACCTCAAAAGGGCACTGGGTGCTACATCTCCT Direct Loss 1 0.910681973909136 1 0.705654323101044 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 BROX ENSG00000162819 CDS Human protein_coding chr1:222906034 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1374 0 0 1 7 222906025 222906046 mRNA hsa-miR-29a C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906034 + 222906014 222906054 41 AGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCCT AGACATCAAACCTCAAAAGGGCACTGGGTGCTACATCTCCT Direct Loss 1 0.910681973909136 1 0.705654323101044 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 BROX ENSG00000162819 CDS Human protein_coding chr1:222906034 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1374 0 0 1 7 222906024 222906046 mRNA hsa-miR-29b C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906034 + 222906014 222906054 41 AGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCCT AGACATCAAACCTCAAAAGGGCACTGGGTGCTACATCTCCT Direct Loss 1 0.910681973909136 1 0.705654323101044 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 BROX ENSG00000162819 CDS Human protein_coding chr1:222906034 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1374 0 0 1 7 222906019 222906041 mRNA hsa-miR-199a-5p C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906034 + 222906014 222906054 41 AGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCCT AGACATCAAACCTCAAAAGGGCACTGGGTGCTACATCTCCT Direct Loss 1 0.910681973909136 1 0.705654323101044 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 BROX ENSG00000162819 CDS Human protein_coding chr1:222906034 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1374 0 0 1 7 222906019 222906041 mRNA hsa-miR-199b-5p C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906034 + 222906014 222906054 41 AGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCCT AGACATCAAACCTCAAAAGGGCACTGGGTGCTACATCTCCT Direct Loss 1 0.910681973909136 1 0.705654323101044 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 BROX ENSG00000162819 CDS Human protein_coding chr1:222906034 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1374 0 0 1 7 222906031 222906054 mRNA hsa-miR-122 C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906034 + 222906014 222906054 41 AGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCCT AGACATCAAACCTCAAAAGGGCACTGGGTGCTACATCTCCT Direct Loss 1 0.910681973909136 1 0.705654323101044 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 BROX ENSG00000162819 CDS Human protein_coding chr1:222906034 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1374 0 0 1 7 222906034 222906053 mRNA hsa-miR-143 C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906034 + 222906014 222906054 41 AGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCCT AGACATCAAACCTCAAAAGGGCACTGGGTGCTACATCTCCT Direct Loss 1 0.910681973909136 1 0.705654323101044 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 BROX ENSG00000162819 CDS Human protein_coding chr1:222906034 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1374 0 0 1 7 222906025 222906046 mRNA hsa-miR-29c C1orf58 miRanda miRanda
14034 chr22 36055096 36055096 1 + A G STAD 36055096 + 36055076 36055116 41 GGATGAGGAAGAGAAGGCAGACTATGTCACAGCTGCTGGAA GGATGAGGAAGAGAAGGCAGGCTATGTCACAGCTGCTGGAA Direct Loss 1 0.80232424806733 1 0.998451590538025 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 APOL6 ENSG00000221963 CDS Human protein_coding chr22:36055096 chr22:36055096 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_1387 0 0 0 1 36055075 36055098 mRNA hsa-miR-346 APOL6 miRanda miRanda
14034 chr11 970244 970244 1 + A G STAD 970244 + 970224 970264 41 CATCTTTCTCCTTGGTCATGACATTGACTTTGGACACATGG CATCTTTCTCCTTGGTCATGGCATTGACTTTGGACACATGG Direct Loss 1 0.877221576238307 1 0.898961663246155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 AP2A2 ENSG00000183020 CDS Human protein_coding chr11:970244 chr11:970244 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1392 0 0 1 2 970242 970265 mRNA hsa-miR-199a-5p AP2A2 miRanda miRanda
14034 chr11 970244 970244 1 + A G STAD 970244 + 970224 970264 41 CATCTTTCTCCTTGGTCATGACATTGACTTTGGACACATGG CATCTTTCTCCTTGGTCATGGCATTGACTTTGGACACATGG Direct Loss 1 0.877221576238307 1 0.898961663246155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 AP2A2 ENSG00000183020 CDS Human protein_coding chr11:970244 chr11:970244 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1392 0 0 1 2 970242 970265 mRNA hsa-miR-199b-5p AP2A2 miRanda miRanda
14034 chr5 76331518 76331518 1 + A G THCA 76331518 + 76331498 76331538 41 CTTACCCTGGTACCGATAGAACAGAAAATGTTAAATATAGA CTTACCCTGGTACCGATAGAGCAGAAAATGTTAAATATAGA Direct Loss 1 0.55206378820235 1 0.963254928588867 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331518 chr5:76331518 nonsynonymous SNV 0.173 0 hm6A_associated_SNPs_1424 0 0 1 1 76331509 76331530 mRNA hsa-miR-543 AGGF1 miRanda miRanda
14034 chr10 69881435 69881435 1 + A G UCEC 69881435 + 69881415 69881455 41 GAAAGTGTCAATTTGGCAAGACTGGCCATCAATTACGACCC GAAAGTGTCAATTTGGCAAGGCTGGCCATCAATTACGACCC Direct Loss 1 0.79961708470037 1 0.992530226707458 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881435 chr10:69881435 synonymous SNV . 0 hm6A_associated_SNPs_1445 0 0 0 1 69881416 69881437 mRNA hsa-miR-431 MYPN miRanda miRanda
14034 chr7 104747871 104747871 1 + A G UCEC 104747871 + 104747851 104747891 41 AGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAAATAAA AGAAATTCTAATTTAACTGAGCTGGGTCTGCAAGAAATAAA Direct Loss 1 0.760968358376111 1 0.969782829284668 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 21 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747871 chr7:104747871 synonymous SNV . 0 hm6A_associated_SNPs_1452 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chr5 70834886 70834886 1 + A T UCEC 70834886 + 70834866 70834906 41 TAGGAAATGACCACAAGTGAACATATCCAAGATGAACCAGG TAGGAAATGACCACAAGTGATCATATCCAAGATGAACCAGG Direct Loss 1 0.230832777469283 1 0.289685845375061 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70834886 chr5:70834886 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_1457 0 0 1 3 70834872 70834893 mRNA hsa-miR-190 BDP1 miRanda miRanda
14034 chr5 70834886 70834886 1 + A T UCEC 70834886 + 70834866 70834906 41 TAGGAAATGACCACAAGTGAACATATCCAAGATGAACCAGG TAGGAAATGACCACAAGTGATCATATCCAAGATGAACCAGG Direct Loss 1 0.230832777469283 1 0.289685845375061 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70834886 chr5:70834886 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_1457 0 0 1 3 70834873 70834894 mRNA hsa-miR-613 BDP1 miRanda miRanda
14034 chr5 70834886 70834886 1 + A T UCEC 70834886 + 70834866 70834906 41 TAGGAAATGACCACAAGTGAACATATCCAAGATGAACCAGG TAGGAAATGACCACAAGTGATCATATCCAAGATGAACCAGG Direct Loss 1 0.230832777469283 1 0.289685845375061 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 21 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70834886 chr5:70834886 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_1457 0 0 1 3 70834873 70834893 mRNA hsa-miR-190b BDP1 miRanda miRanda
14034 chr10 89312182 89312182 1 + A G UCEC 89312182 + 89312162 89312202 41 ACATCCTTCAGAGTTGTCAAACCAGTGAAGAATGTGAATTA ACATCCTTCAGAGTTGTCAAGCCAGTGAAGAATGTGAATTA Direct Loss 1 0.75353588665077 1 0.990351736545563 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89312182 chr10:89312182 nonsynonymous SNV 0.872 0 hm6A_associated_SNPs_1506 0 0 1 3 89312178 89312199 mRNA hsa-miR-23a MINPP1 miRanda miRanda
14034 chr10 89312182 89312182 1 + A G UCEC 89312182 + 89312162 89312202 41 ACATCCTTCAGAGTTGTCAAACCAGTGAAGAATGTGAATTA ACATCCTTCAGAGTTGTCAAGCCAGTGAAGAATGTGAATTA Direct Loss 1 0.75353588665077 1 0.990351736545563 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89312182 chr10:89312182 nonsynonymous SNV 0.872 0 hm6A_associated_SNPs_1506 0 0 1 3 89312178 89312199 mRNA hsa-miR-23b MINPP1 miRanda miRanda
14034 chr10 89312182 89312182 1 + A G UCEC 89312182 + 89312162 89312202 41 ACATCCTTCAGAGTTGTCAAACCAGTGAAGAATGTGAATTA ACATCCTTCAGAGTTGTCAAGCCAGTGAAGAATGTGAATTA Direct Loss 1 0.75353588665077 1 0.990351736545563 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89312182 chr10:89312182 nonsynonymous SNV 0.872 0 hm6A_associated_SNPs_1506 0 0 1 3 89312176 89312198 mRNA hsa-miR-543 MINPP1 miRanda miRanda
14034 chr4 129131043 129131043 1 + A G UCEC 129131043 + 129131023 129131063 41 GATGAATTTGGAAGAAAAAGACATTCCTCTACTTCTGGTGA GATGAATTTGGAAGAAAAAGGCATTCCTCTACTTCTGGTGA Direct Loss 1 0.687309038426947 1 0.755831956863403 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 21 LARP1B ENSG00000138709 CDS Human protein_coding chr4:129131043 chr4:129131043 synonymous SNV . 0 hm6A_associated_SNPs_1541 0 0 1 3 129131029 129131050 mRNA hsa-miR-1 LARP1B miRanda miRanda
14034 chr4 129131043 129131043 1 + A G UCEC 129131043 + 129131023 129131063 41 GATGAATTTGGAAGAAAAAGACATTCCTCTACTTCTGGTGA GATGAATTTGGAAGAAAAAGGCATTCCTCTACTTCTGGTGA Direct Loss 1 0.687309038426947 1 0.755831956863403 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 21 LARP1B ENSG00000138709 CDS Human protein_coding chr4:129131043 chr4:129131043 synonymous SNV . 0 hm6A_associated_SNPs_1541 0 0 1 3 129131029 129131050 mRNA hsa-miR-206 LARP1B miRanda miRanda
14034 chr4 129131043 129131043 1 + A G UCEC 129131043 + 129131023 129131063 41 GATGAATTTGGAAGAAAAAGACATTCCTCTACTTCTGGTGA GATGAATTTGGAAGAAAAAGGCATTCCTCTACTTCTGGTGA Direct Loss 1 0.687309038426947 1 0.755831956863403 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 21 LARP1B ENSG00000138709 CDS Human protein_coding chr4:129131043 chr4:129131043 synonymous SNV . 0 hm6A_associated_SNPs_1541 0 0 1 3 129131030 129131050 mRNA hsa-miR-613 LARP1B miRanda miRanda
14034 chr1 207532935 207532935 1 + A G UCEC 207532935 + 207532915 207532955 41 GTTTGCTTGGGACGCTAGTAACCATGGGCTTGCTGACTTAG GTTTGCTTGGGACGCTAGTAGCCATGGGCTTGCTGACTTAG Direct Loss 1 0.583470050427036 1 0.437463521957397 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 CD55 ENSG00000196352 CDS Human protein_coding chr1:207532935 chr1:207532935 nonsynonymous SNV 0.008 0 hm6A_associated_SNPs_1585 0 0 1 3 207532930 207532953 mRNA hsa-miR-15b CD55 miRanda miRanda
14034 chr1 207532935 207532935 1 + A G UCEC 207532935 + 207532915 207532955 41 GTTTGCTTGGGACGCTAGTAACCATGGGCTTGCTGACTTAG GTTTGCTTGGGACGCTAGTAGCCATGGGCTTGCTGACTTAG Direct Loss 1 0.583470050427036 1 0.437463521957397 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 CD55 ENSG00000196352 CDS Human protein_coding chr1:207532935 chr1:207532935 nonsynonymous SNV 0.008 0 hm6A_associated_SNPs_1585 0 0 1 3 207532930 207532953 mRNA hsa-miR-424 CD55 miRanda miRanda
14034 chr1 207532935 207532935 1 + A G UCEC 207532935 + 207532915 207532955 41 GTTTGCTTGGGACGCTAGTAACCATGGGCTTGCTGACTTAG GTTTGCTTGGGACGCTAGTAGCCATGGGCTTGCTGACTTAG Direct Loss 1 0.583470050427036 1 0.437463521957397 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 21 CD55 ENSG00000196352 CDS Human protein_coding chr1:207532935 chr1:207532935 nonsynonymous SNV 0.008 0 hm6A_associated_SNPs_1585 0 0 1 3 207532931 207532953 mRNA hsa-miR-497 CD55 miRanda miRanda
14034 chr1 150054072 150054072 1 + A G UCEC 150054072 + 150054052 150054092 41 AAAACTAGAATCAATAGCAGACATGAAGGTAAATTGAACAT AAAACTAGAATCAATAGCAGGCATGAAGGTAAATTGAACAT Direct Loss 1 0.461775964133922 1 0.887166738510132 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 VPS45 ENSG00000136631 CDS Human protein_coding chr1:150054072 chr1:150054072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1640 0 0 0 4 150054057 150054079 mRNA hsa-miR-205 VPS45 miRanda miRanda
14034 chr1 150054072 150054072 1 + A G UCEC 150054072 + 150054052 150054092 41 AAAACTAGAATCAATAGCAGACATGAAGGTAAATTGAACAT AAAACTAGAATCAATAGCAGGCATGAAGGTAAATTGAACAT Direct Loss 1 0.461775964133922 1 0.887166738510132 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 VPS45 ENSG00000136631 CDS Human protein_coding chr1:150054072 chr1:150054072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1640 0 0 0 4 150054052 150054074 mRNA hsa-miR-346 VPS45 miRanda miRanda
14034 chr1 150054072 150054072 1 + A G UCEC 150054072 + 150054052 150054092 41 AAAACTAGAATCAATAGCAGACATGAAGGTAAATTGAACAT AAAACTAGAATCAATAGCAGGCATGAAGGTAAATTGAACAT Direct Loss 1 0.461775964133922 1 0.887166738510132 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 VPS45 ENSG00000136631 CDS Human protein_coding chr1:150054072 chr1:150054072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1640 0 0 0 4 150054069 150054079 mRNA hsa-miR-495 VPS45 miRanda miRanda
14034 chr1 150054072 150054072 1 + A G UCEC 150054072 + 150054052 150054092 41 AAAACTAGAATCAATAGCAGACATGAAGGTAAATTGAACAT AAAACTAGAATCAATAGCAGGCATGAAGGTAAATTGAACAT Direct Loss 1 0.461775964133922 1 0.887166738510132 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 21 VPS45 ENSG00000136631 CDS Human protein_coding chr1:150054072 chr1:150054072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1640 0 0 0 4 150054069 150054079 mRNA hsa-miR-505 VPS45 miRanda miRanda
14034 chr1 120285641 120285641 1 + A G UCEC 120285641 + 120285621 120285661 41 ATTCCGGACTCAGACCTCTGACCCTGCAATGCTGCCTACCA ATTCCGGACTCAGACCTCTGGCCCTGCAATGCTGCCTACCA Direct Loss 1 0.12958276214412 1 0.678864002227783 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285641 chr1:120285641 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_1662 0 0 1 2 120285636 120285656 mRNA hsa-miR-103 PHGDH miRanda miRanda
14034 chr1 120285641 120285641 1 + A G UCEC 120285641 + 120285621 120285661 41 ATTCCGGACTCAGACCTCTGACCCTGCAATGCTGCCTACCA ATTCCGGACTCAGACCTCTGGCCCTGCAATGCTGCCTACCA Direct Loss 1 0.12958276214412 1 0.678864002227783 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285641 chr1:120285641 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_1662 0 0 1 2 120285636 120285656 mRNA hsa-miR-107 PHGDH miRanda miRanda
14034 chr12 12874113 12874113 1 + A T UCEC 12874113 + 12874093 12874133 41 TGAAAAACAACAACACAATAACACTAAAATTTTAGGCACTC TGAAAAACAACAACACAATATCACTAAAATTTTAGGCACTC Direct Loss 1 0.940305633568298 1 0.630818665027618 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12874113 chr12:12874113 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1668 0 0 1 3 12874098 12874120 mRNA hsa-miR-142-3p CDKN1B miRanda miRanda
14034 chr12 12874113 12874113 1 + A T UCEC 12874113 + 12874093 12874133 41 TGAAAAACAACAACACAATAACACTAAAATTTTAGGCACTC TGAAAAACAACAACACAATATCACTAAAATTTTAGGCACTC Direct Loss 1 0.940305633568298 1 0.630818665027618 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12874113 chr12:12874113 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1668 0 0 1 3 12874097 12874118 mRNA hsa-miR-154 CDKN1B miRanda miRanda
14034 chr12 12874113 12874113 1 + A T UCEC 12874113 + 12874093 12874133 41 TGAAAAACAACAACACAATAACACTAAAATTTTAGGCACTC TGAAAAACAACAACACAATATCACTAAAATTTTAGGCACTC Direct Loss 1 0.940305633568298 1 0.630818665027618 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12874113 chr12:12874113 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1668 0 0 1 3 12874102 12874124 mRNA hsa-miR-590-3p CDKN1B miRanda miRanda
14034 chr11 65269085 65269085 1 + A G UCEC 65269085 + 65269065 65269105 41 TGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGT TGCTATAGTACTATTGACAAGCTGGGTTAGAGAAGGAGTGT Direct Loss 1 0.0709751803936593 1 0.780202805995941 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269085 chr11:65269085 . . 0 hm6A_associated_SNPs_1681 0 0 1 2 65269083 65269105 lncRNA hsa-miR-483-3p MALAT1 miRanda starBase2
14034 chr11 65269085 65269085 1 + A G UCEC 65269085 + 65269065 65269105 41 TGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGT TGCTATAGTACTATTGACAAGCTGGGTTAGAGAAGGAGTGT Direct Loss 1 0.0709751803936593 1 0.780202805995941 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269085 chr11:65269085 . . 0 hm6A_associated_SNPs_1681 0 0 1 2 65269079 65269100 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr1 2106709 2106709 1 + A G UCEC 2106709 + 2106689 2106729 41 GCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCT GCCACAGACTGGATTTTCTGGCATCAAGTCCCACGCGTTCT Direct Loss 1 0.411788857882798 1 0.958438396453857 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 21 PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2106709 chr1:2106709 nonsynonymous SNV 0.976 4 hm6A_associated_SNPs_1700 0 0 0 1 2106696 2106716 mRNA hsa-miR-599 PRKCZ miRanda miRanda
14034 chr6 137147508 137147508 1 + A G UCEC 137147508 + 137147488 137147528 41 ACTTGGAGTGAGAACAACGAACATGTCCTCATCACCTGTAG ACTTGGAGTGAGAACAACGAGCATGTCCTCATCACCTGTAG Direct Loss 1 0.736943203601384 1 0.0271004736423492 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147508 chr6:137147508 synonymous SNV . 0 hm6A_associated_SNPs_1716 0 0 0 2 137147505 137147526 mRNA hsa-miR-125a-3p PEX7 miRanda miRanda
14034 chr6 137147508 137147508 1 + A G UCEC 137147508 + 137147488 137147528 41 ACTTGGAGTGAGAACAACGAACATGTCCTCATCACCTGTAG ACTTGGAGTGAGAACAACGAGCATGTCCTCATCACCTGTAG Direct Loss 1 0.736943203601384 1 0.0271004736423492 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 21 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147508 chr6:137147508 synonymous SNV . 0 hm6A_associated_SNPs_1716 0 0 0 2 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chr1 93300392 93300392 1 + A C UCEC 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACGACCTGCCAAAATATGGTGTGAA Direct Loss 1 0.232591797563367 1 0.162244230508804 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300392 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_1717 0 0 1 4 93300378 93300400 mRNA hsa-miR-96 RPL5 miRanda miRanda
14034 chr1 93300392 93300392 1 + A C UCEC 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACGACCTGCCAAAATATGGTGTGAA Direct Loss 1 0.232591797563367 1 0.162244230508804 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300392 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_1717 0 0 1 4 93300377 93300400 mRNA hsa-miR-182 RPL5 miRanda miRanda
14034 chr1 93300392 93300392 1 + A C UCEC 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACGACCTGCCAAAATATGGTGTGAA Direct Loss 1 0.232591797563367 1 0.162244230508804 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300392 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_1717 0 0 1 4 93300391 93300412 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr1 93300392 93300392 1 + A C UCEC 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACGACCTGCCAAAATATGGTGTGAA Direct Loss 1 0.232591797563367 1 0.162244230508804 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300392 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_1717 0 0 1 4 93300379 93300400 mRNA hsa-miR-1271 RPL5 miRanda miRanda
14034 chrX 135292067 135292067 1 + A T UCEC 135292067 + 135292047 135292087 41 AGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTG AGTGTGGTGGCCTATGAAGGTCAATCCTGGCACGACTACTG Direct Loss 1 0.77841106973951 1 0.757326304912567 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 21 FHL1 ENSG00000022267 CDS Human protein_coding chrX:135292067 chrX:135292067 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1739 0 0 1 3 135292044 135292067 mRNA hsa-miR-205 FHL1 miRanda miRanda
14034 chrX 135292067 135292067 1 + A T UCEC 135292067 + 135292047 135292087 41 AGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTG AGTGTGGTGGCCTATGAAGGTCAATCCTGGCACGACTACTG Direct Loss 1 0.77841106973951 1 0.757326304912567 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 21 FHL1 ENSG00000022267 CDS Human protein_coding chrX:135292067 chrX:135292067 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1739 0 0 1 3 135292050 135292073 mRNA hsa-miR-219-5p FHL1 miRanda miRanda
14034 chrX 135292067 135292067 1 + A T UCEC 135292067 + 135292047 135292087 41 AGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTG AGTGTGGTGGCCTATGAAGGTCAATCCTGGCACGACTACTG Direct Loss 1 0.77841106973951 1 0.757326304912567 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 21 FHL1 ENSG00000022267 CDS Human protein_coding chrX:135292067 chrX:135292067 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_1739 0 0 1 3 135292051 135292074 mRNA hsa-miR-876-5p FHL1 miRanda miRanda
14034 chr3 124462919 124462919 1 + A C UCEC 124462919 + 124462899 124462939 41 TGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCA TGGGAAGCGTATTTGAGTAGCCTTGGTGTTTGAGTGCTTCA Direct Loss 1 0.754774633536788 1 0.875973701477051 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 21 UMPS ENSG00000114491 CDS Human protein_coding chr3:124462919 chr3:124462919 nonsynonymous SNV 0.911 2 hm6A_associated_SNPs_1774 0 0 1 1 124462914 124462933 mRNA hsa-miR-371-5p UMPS miRanda miRanda
14034 chr19 44591242 44591242 1 + A G UCEC 44591242 + 44591222 44591262 41 AGACTCCACAGCAGAGAAAAACTATTCCAATGTGAGGATTG AGACTCCACAGCAGAGAAAAGCTATTCCAATGTGAGGATTG Direct Loss 1 0.681976675634948 1 0.983705043792725 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 21 ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44591242 chr19:44591242 synonymous SNV . 0 hm6A_associated_SNPs_1776 0 0 1 1 44591231 44591250 mRNA hsa-miR-613 ZNF284 miRanda miRanda
14034 chr12 44782043 44782043 1 + A G UCEC 44782043 + 44782023 44782063 41 TAAAACATATGTTGAGGGAGACATGTTCTTACACAGCAGGT TAAAACATATGTTGAGGGAGGCATGTTCTTACACAGCAGGT Direct Loss 1 0.549915832487391 1 0.338714480400085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 TMEM117 ENSG00000139173 CDS Human protein_coding chr12:44782043 chr12:44782043 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_1784 0 0 0 2 44782029 44782050 mRNA hsa-miR-212 TMEM117 miRanda miRanda
14034 chr12 44782043 44782043 1 + A G UCEC 44782043 + 44782023 44782063 41 TAAAACATATGTTGAGGGAGACATGTTCTTACACAGCAGGT TAAAACATATGTTGAGGGAGGCATGTTCTTACACAGCAGGT Direct Loss 1 0.549915832487391 1 0.338714480400085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 TMEM117 ENSG00000139173 CDS Human protein_coding chr12:44782043 chr12:44782043 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_1784 0 0 0 2 44782042 44782063 mRNA hsa-miR-370 TMEM117 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141389 + 31141369 31141409 41 AGCTTTTCCTGGACCATAAGACACTGTACTTTGACGTGGAG AGCTTTTCCTGGACCATAAGGCACTGTACTTTGACGTGGAG Direct Loss 1 0.837023772477643 1 0.971986949443817 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141389 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_1823 0 0 1 4 31141374 31141396 mRNA hsa-miR-199a-5p MYST1 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141389 + 31141369 31141409 41 AGCTTTTCCTGGACCATAAGACACTGTACTTTGACGTGGAG AGCTTTTCCTGGACCATAAGGCACTGTACTTTGACGTGGAG Direct Loss 1 0.837023772477643 1 0.971986949443817 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141389 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_1823 0 0 1 4 31141373 31141394 mRNA hsa-miR-187 MYST1 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141389 + 31141369 31141409 41 AGCTTTTCCTGGACCATAAGACACTGTACTTTGACGTGGAG AGCTTTTCCTGGACCATAAGGCACTGTACTTTGACGTGGAG Direct Loss 1 0.837023772477643 1 0.971986949443817 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141389 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_1823 0 0 1 4 31141374 31141396 mRNA hsa-miR-199b-5p MYST1 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141389 + 31141369 31141409 41 AGCTTTTCCTGGACCATAAGACACTGTACTTTGACGTGGAG AGCTTTTCCTGGACCATAAGGCACTGTACTTTGACGTGGAG Direct Loss 1 0.837023772477643 1 0.971986949443817 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141389 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_1823 0 0 1 4 31141377 31141397 mRNA hsa-miR-128 MYST1 miRanda miRanda
14034 chr17 58024030 58024030 1 + A G UCEC 58024030 + 58024010 58024050 41 GCATAGAGCAGATGGATGTGACAATGAGTGGGGAAGCATCG GCATAGAGCAGATGGATGTGGCAATGAGTGGGGAAGCATCG Direct Loss 1 0.922298284273617 1 0.933470845222473 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58024030 chr17:58024030 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_1827 0 0 1 1 58024016 58024035 mRNA hsa-miR-363 RPS6KB1 miRanda miRanda
14034 chr17 48458296 48458296 1 + A G UCEC 48458296 + 48458276 48458316 41 TCTCTCTTTAGATAGTGCTGACTGATTCTAGCCCTCAGGGA TCTCTCTTTAGATAGTGCTGGCTGATTCTAGCCCTCAGGGA Direct Loss 1 0.633324436975496 1 0.870415568351746 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 EME1 ENSG00000154920 CDS Human protein_coding chr17:48458296 chr17:48458296 nonsynonymous SNV 0.346 1 hm6A_associated_SNPs_1843 0 0 0 2 48458295 48458316 mRNA hsa-miR-125b EME1 miRanda miRanda
14034 chr17 48458296 48458296 1 + A G UCEC 48458296 + 48458276 48458316 41 TCTCTCTTTAGATAGTGCTGACTGATTCTAGCCCTCAGGGA TCTCTCTTTAGATAGTGCTGGCTGATTCTAGCCCTCAGGGA Direct Loss 1 0.633324436975496 1 0.870415568351746 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 EME1 ENSG00000154920 CDS Human protein_coding chr17:48458296 chr17:48458296 nonsynonymous SNV 0.346 1 hm6A_associated_SNPs_1843 0 0 0 2 48458294 48458316 mRNA hsa-miR-125a-5p EME1 miRanda miRanda
14034 chr12 110013833 110013833 1 + A G UCEC 110013833 + 110013813 110013853 41 CTGTATCCTTGAACTTGAGAACATTCCTCCGGCTTCAACCC CTGTATCCTTGAACTTGAGAGCATTCCTCCGGCTTCAACCC Direct Loss 1 0.805059773593396 1 0.00816997885704041 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MVK ENSG00000110921 CDS Human protein_coding chr12:110013833 chr12:110013833 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_1865 0 0 1 3 110013819 110013840 mRNA hsa-miR-1 MVK miRanda miRanda
14034 chr12 110013833 110013833 1 + A G UCEC 110013833 + 110013813 110013853 41 CTGTATCCTTGAACTTGAGAACATTCCTCCGGCTTCAACCC CTGTATCCTTGAACTTGAGAGCATTCCTCCGGCTTCAACCC Direct Loss 1 0.805059773593396 1 0.00816997885704041 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MVK ENSG00000110921 CDS Human protein_coding chr12:110013833 chr12:110013833 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_1865 0 0 1 3 110013819 110013840 mRNA hsa-miR-206 MVK miRanda miRanda
14034 chr12 110013833 110013833 1 + A G UCEC 110013833 + 110013813 110013853 41 CTGTATCCTTGAACTTGAGAACATTCCTCCGGCTTCAACCC CTGTATCCTTGAACTTGAGAGCATTCCTCCGGCTTCAACCC Direct Loss 1 0.805059773593396 1 0.00816997885704041 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MVK ENSG00000110921 CDS Human protein_coding chr12:110013833 chr12:110013833 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_1865 0 0 1 3 110013821 110013840 mRNA hsa-miR-613 MVK miRanda miRanda
14034 chr12 102590434 102590434 1 + A G UCEC 102590434 + 102590414 102590454 41 TGTGGACCAACAGGTATCAGACTTGCCAACAAGGTCGGTAG TGTGGACCAACAGGTATCAGGCTTGCCAACAAGGTCGGTAG Direct Loss 1 0.676925825936148 1 0.0891547799110413 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 PMCH ENSG00000183395 CDS Human protein_coding chr12:102590434 chr12:102590434 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_1875 0 0 1 1 102590417 102590443 mRNA hsa-miR-182 C12orf48 miRanda miRanda
14034 chrX 118587016 118587016 1 + A G UCEC 118587016 + 118586996 118587036 41 AGAAAACCGAAGCCTAAAAAACCAACTCTATAAAATGGAAT AGAAAACCGAAGCCTAAAAAGCCAACTCTATAAAATGGAAT Direct Loss 1 0.706698339628798 1 0.944921553134918 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 21 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587016 chrX:118587016 synonymous SNV . 0 hm6A_associated_SNPs_1883 0 0 1 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chr4 52779516 52779516 1 + A G UCEC 52779516 + 52779496 52779536 41 ATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCTCAGC ATGTCCTAGAGTTTAGCAGAGCAATTAATCTTGACCTCAGC Direct Loss 1 0.802058033815054 1 0.208359748125076 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 21 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52779516 chr4:52779516 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1933 0 0 1 1 52779498 52779520 mRNA hsa-miR-375 DCUN1D4 miRanda miRanda
14034 chr11 76917237 76917237 1 + A G UCEC 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGGCACTGACGAGGTGAGGGTCA Direct Loss 1 0.189280125219879 1 0.792832374572754 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917237 nonsynonymous SNV 0.385 0 hm6A_associated_SNPs_1956 0 0 0 4 76917223 76917245 mRNA hsa-miR-223 MYO7A miRanda miRanda
14034 chr11 76917237 76917237 1 + A G UCEC 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGGCACTGACGAGGTGAGGGTCA Direct Loss 1 0.189280125219879 1 0.792832374572754 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917237 nonsynonymous SNV 0.385 0 hm6A_associated_SNPs_1956 0 0 0 4 76917222 76917243 mRNA hsa-miR-152 MYO7A miRanda miRanda
14034 chr11 76917237 76917237 1 + A G UCEC 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGGCACTGACGAGGTGAGGGTCA Direct Loss 1 0.189280125219879 1 0.792832374572754 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917237 nonsynonymous SNV 0.385 0 hm6A_associated_SNPs_1956 0 0 0 4 76917221 76917243 mRNA hsa-miR-148b MYO7A miRanda miRanda
14034 chr11 76917237 76917237 1 + A G UCEC 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGGCACTGACGAGGTGAGGGTCA Direct Loss 1 0.189280125219879 1 0.792832374572754 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917237 nonsynonymous SNV 0.385 0 hm6A_associated_SNPs_1956 0 0 0 4 76917234 76917247 mRNA hsa-miR-873 MYO7A miRanda miRanda
14034 chr11 94231633 94231633 1 + A G UCEC 94231633 + 94231613 94231653 41 CATTTGATATTGCCAGGAGGACAAGTATCTATCACTACCTC CATTTGATATTGCCAGGAGGGCAAGTATCTATCACTACCTC Direct Loss 1 0.959115977210567 1 0.985635340213776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231633 chr11:94231633 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1958 0 0 0 7 94231631 94231654 mRNA hsa-let-7b ANKRD49 miRanda miRanda
14034 chr11 94231633 94231633 1 + A G UCEC 94231633 + 94231613 94231653 41 CATTTGATATTGCCAGGAGGACAAGTATCTATCACTACCTC CATTTGATATTGCCAGGAGGGCAAGTATCTATCACTACCTC Direct Loss 1 0.959115977210567 1 0.985635340213776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231633 chr11:94231633 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1958 0 0 0 7 94231633 94231654 mRNA hsa-let-7c ANKRD49 miRanda miRanda
14034 chr11 94231633 94231633 1 + A G UCEC 94231633 + 94231613 94231653 41 CATTTGATATTGCCAGGAGGACAAGTATCTATCACTACCTC CATTTGATATTGCCAGGAGGGCAAGTATCTATCACTACCTC Direct Loss 1 0.959115977210567 1 0.985635340213776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231633 chr11:94231633 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1958 0 0 0 7 94231633 94231654 mRNA hsa-miR-98 ANKRD49 miRanda miRanda
14034 chr11 94231633 94231633 1 + A G UCEC 94231633 + 94231613 94231653 41 CATTTGATATTGCCAGGAGGACAAGTATCTATCACTACCTC CATTTGATATTGCCAGGAGGGCAAGTATCTATCACTACCTC Direct Loss 1 0.959115977210567 1 0.985635340213776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231633 chr11:94231633 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1958 0 0 0 7 94231629 94231653 mRNA hsa-miR-196a ANKRD49 miRanda miRanda
14034 chr11 94231633 94231633 1 + A G UCEC 94231633 + 94231613 94231653 41 CATTTGATATTGCCAGGAGGACAAGTATCTATCACTACCTC CATTTGATATTGCCAGGAGGGCAAGTATCTATCACTACCTC Direct Loss 1 0.959115977210567 1 0.985635340213776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231633 chr11:94231633 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1958 0 0 0 7 94231633 94231654 mRNA hsa-let-7g ANKRD49 miRanda miRanda
14034 chr11 94231633 94231633 1 + A G UCEC 94231633 + 94231613 94231653 41 CATTTGATATTGCCAGGAGGACAAGTATCTATCACTACCTC CATTTGATATTGCCAGGAGGGCAAGTATCTATCACTACCTC Direct Loss 1 0.959115977210567 1 0.985635340213776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231633 chr11:94231633 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1958 0 0 0 7 94231633 94231654 mRNA hsa-let-7i ANKRD49 miRanda miRanda
14034 chr11 94231633 94231633 1 + A G UCEC 94231633 + 94231613 94231653 41 CATTTGATATTGCCAGGAGGACAAGTATCTATCACTACCTC CATTTGATATTGCCAGGAGGGCAAGTATCTATCACTACCTC Direct Loss 1 0.959115977210567 1 0.985635340213776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 21 ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231633 chr11:94231633 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_1958 0 0 0 7 94231629 94231653 mRNA hsa-miR-196b ANKRD49 miRanda miRanda
14034 chr20 36431443 36431443 1 + A G UCEC 36431443 + 36431423 36431463 41 GTGGGAACCACTGAGAAGGAACATGAAGGTAGGGTTCACTG GTGGGAACCACTGAGAAGGAGCATGAAGGTAGGGTTCACTG Direct Loss 1 0.456811353805482 1 0.89286470413208 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36431443 chr20:36431443 synonymous SNV . 0 hm6A_associated_SNPs_1963 0 0 0 3 36431429 36431450 mRNA hsa-miR-205 CTNNBL1 miRanda miRanda
14034 chr20 36431443 36431443 1 + A G UCEC 36431443 + 36431423 36431463 41 GTGGGAACCACTGAGAAGGAACATGAAGGTAGGGTTCACTG GTGGGAACCACTGAGAAGGAGCATGAAGGTAGGGTTCACTG Direct Loss 1 0.456811353805482 1 0.89286470413208 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36431443 chr20:36431443 synonymous SNV . 0 hm6A_associated_SNPs_1963 0 0 0 3 36431435 36431450 mRNA hsa-miR-149 CTNNBL1 miRanda miRanda
14034 chr20 36431443 36431443 1 + A G UCEC 36431443 + 36431423 36431463 41 GTGGGAACCACTGAGAAGGAACATGAAGGTAGGGTTCACTG GTGGGAACCACTGAGAAGGAGCATGAAGGTAGGGTTCACTG Direct Loss 1 0.456811353805482 1 0.89286470413208 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36431443 chr20:36431443 synonymous SNV . 0 hm6A_associated_SNPs_1963 0 0 0 3 36431434 36431450 mRNA hsa-miR-328 CTNNBL1 miRanda miRanda
14034 chr20 17968837 17968837 1 + A C UCEC 17968837 + 17968817 17968857 41 TCTGTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT TCTGTGTGATTGATTGGAAGCCATCAGAGAAACCAAAGCCT Direct Loss 1 0.72056836200783 1 0.00146880745887756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 21 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17968837 chr20:17968837 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1971 0 0 1 1 17968833 17968855 mRNA hsa-miR-9 C20orf72 miRanda miRanda
14034 chr2 58386671 58386671 1 - T C UCEC 58386671 - 58386651 58386691 41 AGTCTGTGATCCCCGTGCTGACTGTGGAAGTGTATTTATAC AGTCTGTGATCCCCGTGCTGGCTGTGGAAGTGTATTTATAC Direct Loss 1 0.932513654258597 1 0.105042606592178 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 21 VRK2 ENSG00000028116 CDS Human protein_coding chr2:58386671 chr2:58386671 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_1977 0 0 1 2 58386668 58386695 mRNA hsa-miR-15b FANCL miRanda miRanda
14034 chr2 58386671 58386671 1 - T C UCEC 58386671 - 58386651 58386691 41 AGTCTGTGATCCCCGTGCTGACTGTGGAAGTGTATTTATAC AGTCTGTGATCCCCGTGCTGGCTGTGGAAGTGTATTTATAC Direct Loss 1 0.932513654258597 1 0.105042606592178 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 21 VRK2 ENSG00000028116 CDS Human protein_coding chr2:58386671 chr2:58386671 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_1977 0 0 1 2 58386651 58386672 mRNA hsa-miR-374b FANCL miRanda miRanda
14034 chr7 2419050 2419050 1 + A G UCEC 2419050 + 2419030 2419070 41 GGTGGACACTGACGAGCTGGACAGCAACGTGGACGACTGGG GGTGGACACTGACGAGCTGGGCAGCAACGTGGACGACTGGG Direct Loss 1 0.77468114943074 1 0.990193009376526 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 21 EIF3B ENSG00000106263 CDS Human protein_coding chr7:2419050 chr7:2419050 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_1991 0 0 1 1 2419036 2419057 mRNA hsa-miR-599 EIF3B miRanda miRanda
14034 chr10 28971147 28971147 1 + A G UCEC 28971147 + 28971127 28971167 41 TTGCACTACAGCTTTCACGGACACCATTCCAAAAAGGGGCA TTGCACTACAGCTTTCACGGGCACCATTCCAAAAAGGGGCA Direct Loss 1 0.967849143251254 1 0.965261161327362 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 BAMBI ENSG00000095739 CDS Human protein_coding chr10:28971147 chr10:28971147 synonymous SNV . 0 hm6A_associated_SNPs_2031 0 0 1 3 28971136 28971157 mRNA hsa-miR-1 BAMBI miRanda miRanda
14034 chr10 28971147 28971147 1 + A G UCEC 28971147 + 28971127 28971167 41 TTGCACTACAGCTTTCACGGACACCATTCCAAAAAGGGGCA TTGCACTACAGCTTTCACGGGCACCATTCCAAAAAGGGGCA Direct Loss 1 0.967849143251254 1 0.965261161327362 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 BAMBI ENSG00000095739 CDS Human protein_coding chr10:28971147 chr10:28971147 synonymous SNV . 0 hm6A_associated_SNPs_2031 0 0 1 3 28971136 28971157 mRNA hsa-miR-206 BAMBI miRanda miRanda
14034 chr10 28971147 28971147 1 + A G UCEC 28971147 + 28971127 28971167 41 TTGCACTACAGCTTTCACGGACACCATTCCAAAAAGGGGCA TTGCACTACAGCTTTCACGGGCACCATTCCAAAAAGGGGCA Direct Loss 1 0.967849143251254 1 0.965261161327362 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 21 BAMBI ENSG00000095739 CDS Human protein_coding chr10:28971147 chr10:28971147 synonymous SNV . 0 hm6A_associated_SNPs_2031 0 0 1 3 28971138 28971157 mRNA hsa-miR-613 BAMBI miRanda miRanda
14034 chr1 879618 879618 1 + C T rs1134009 879638 + 879618 879658 41 CTTTCGGTTTCGGATGCAAAACAAAAAATTTTAAAAGAAAA TTTTCGGTTTCGGATGCAAAACAAAAAATTTTAAAAGAAAA < 41bp 1 0.444447034844114 1 0.977316915988922 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879638 chr1:879618 . . 0 hm6A_associated_SNPs_2075 0 0 1 1 879613 879635 mRNA hsa-miR-324-5p SAMD11 miRanda miRanda
14034 chr1 879660 879660 1 + G A rs561771231 879663 + 879643 879683 41 AAATTTTAAAAGAAAATGTGACTTCAAAGGAAAGGAACAAA AAATTTTAAAAGAAAATATGACTTCAAAGGAAAGGAACAAA < 41bp 1 0.492285143717226 1 0.984925389289856 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879663 chr1:879660 . . 0 hm6A_associated_SNPs_2076 0 0 1 3 879641 879664 mRNA hsa-miR-23a SAMD11 miRanda miRanda
14034 chr1 879660 879660 1 + G A rs561771231 879663 + 879643 879683 41 AAATTTTAAAAGAAAATGTGACTTCAAAGGAAAGGAACAAA AAATTTTAAAAGAAAATATGACTTCAAAGGAAAGGAACAAA < 41bp 1 0.492285143717226 1 0.984925389289856 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879663 chr1:879660 . . 0 hm6A_associated_SNPs_2076 0 0 1 3 879647 879667 mRNA hsa-miR-224 SAMD11 miRanda miRanda
14034 chr1 879660 879660 1 + G A rs561771231 879663 + 879643 879683 41 AAATTTTAAAAGAAAATGTGACTTCAAAGGAAAGGAACAAA AAATTTTAAAAGAAAATATGACTTCAAAGGAAAGGAACAAA < 41bp 1 0.492285143717226 1 0.984925389289856 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879663 chr1:879660 . . 0 hm6A_associated_SNPs_2076 0 0 1 3 879644 879664 mRNA hsa-miR-23b SAMD11 miRanda miRanda
14034 chr1 879660 879660 1 + G A rs561771231 879679 + 879659 879699 41 TGTGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG TATGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG < 41bp 1 0.573640459899191 1 0.976378202438354 experiment 0.852719080201619 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 2 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879679 chr1:879660 . . 0 hm6A_associated_SNPs_2077 0 0 1 3 879641 879664 mRNA hsa-miR-23a SAMD11 miRanda miRanda
14034 chr1 879660 879660 1 + G A rs561771231 879679 + 879659 879699 41 TGTGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG TATGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG < 41bp 1 0.573640459899191 1 0.976378202438354 experiment 0.852719080201619 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 2 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879679 chr1:879660 . . 0 hm6A_associated_SNPs_2077 0 0 1 3 879647 879667 mRNA hsa-miR-224 SAMD11 miRanda miRanda
14034 chr1 879660 879660 1 + G A rs561771231 879679 + 879659 879699 41 TGTGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG TATGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG < 41bp 1 0.573640459899191 1 0.976378202438354 experiment 0.852719080201619 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 2 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879679 chr1:879660 . . 0 hm6A_associated_SNPs_2077 0 0 1 3 879644 879664 mRNA hsa-miR-23b SAMD11 miRanda miRanda
14034 chr1 879673 879673 1 + A G rs564003453 879663 + 879643 879683 41 AAATTTTAAAAGAAAATGTGACTTCAAAGGAAAGGAACAAA AAATTTTAAAAGAAAATGTGACTTCAAAGGGAAGGAACAAA < 41bp 1 0.485513393867505 1 0.984382510185242 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879663 chr1:879673 . . 0 hm6A_associated_SNPs_2078 0 0 1 1 879662 879683 mRNA hsa-miR-375 SAMD11 miRanda miRanda
14034 chr1 879673 879673 1 + A G rs564003453 879679 + 879659 879699 41 TGTGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG TGTGACTTCAAAGGGAAGGAACAAATTTTCAAAGACTTGGG < 41bp 1 0.54379165678442 1 0.972177386283875 experiment 0.91241668643116 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 15 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879679 chr1:879673 . . 0 hm6A_associated_SNPs_2079 0 0 1 1 879662 879683 mRNA hsa-miR-375 SAMD11 miRanda miRanda
14034 chr1 879673 879673 1 + A G rs564003453 879693 + 879673 879713 41 AAAGGAACAAATTTTCAAAGACTTGGGGGAGTGAAGGCAGA GAAGGAACAAATTTTCAAAGACTTGGGGGAGTGAAGGCAGA < 41bp 1 0.538511952173109 1 0.981655478477478 experiment 0.922976095653783 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879693 chr1:879673 . . 0 hm6A_associated_SNPs_2080 0 0 1 1 879662 879683 mRNA hsa-miR-375 SAMD11 miRanda miRanda
14034 chr1 879676 879676 1 + G A rs6605067 879663 + 879643 879683 41 AAATTTTAAAAGAAAATGTGACTTCAAAGGAAAGGAACAAA AAATTTTAAAAGAAAATGTGACTTCAAAGGAAAAGAACAAA < 41bp 1 0.482318928717862 1 0.990003168582916 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879663 chr1:879676 . . 0 hm6A_associated_SNPs_2081 0 0 1 1 879662 879683 mRNA hsa-miR-375 SAMD11 miRanda miRanda
14034 chr1 879676 879676 1 + G A rs6605067 879679 + 879659 879699 41 TGTGACTTCAAAGGAAAGGAACAAATTTTCAAAGACTTGGG TGTGACTTCAAAGGAAAAGAACAAATTTTCAAAGACTTGGG < 41bp 1 0.588026101076387 1 0.986469745635986 experiment 0.823947797847225 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879679 chr1:879676 . . 0 hm6A_associated_SNPs_2082 0 0 1 1 879662 879683 mRNA hsa-miR-375 SAMD11 miRanda miRanda
14034 chr1 879676 879676 1 + G A rs6605067 879693 + 879673 879713 41 AAAGGAACAAATTTTCAAAGACTTGGGGGAGTGAAGGCAGA AAAAGAACAAATTTTCAAAGACTTGGGGGAGTGAAGGCAGA < 41bp 1 0.538182322440442 1 0.988760948181152 experiment 0.923635355119115 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 NOC2L;SAMD11 ENSG00000187634;ENSG00000188976 UTR3 Human other chr1:879693 chr1:879676 . . 0 hm6A_associated_SNPs_2083 0 0 1 1 879662 879683 mRNA hsa-miR-375 SAMD11 miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990838 + 990818 990858 41 CCTCCTGCGCCAATACTGTGACTTCCAAACAATGTTACTGC CCTCCTGCACCAATACTGTGACTTCCAAACAATGTTACTGC < 41bp 1 0.585089503857905 1 0.921472311019897 experiment 0.829820992284191 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990838 chr1:990826 . . 0 hm6A_associated_SNPs_2107 0 0 1 4 990816 990839 mRNA hsa-miR-27a AGRN miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990838 + 990818 990858 41 CCTCCTGCGCCAATACTGTGACTTCCAAACAATGTTACTGC CCTCCTGCACCAATACTGTGACTTCCAAACAATGTTACTGC < 41bp 1 0.585089503857905 1 0.921472311019897 experiment 0.829820992284191 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990838 chr1:990826 . . 0 hm6A_associated_SNPs_2107 0 0 1 4 990820 990842 mRNA hsa-miR-224 AGRN miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990838 + 990818 990858 41 CCTCCTGCGCCAATACTGTGACTTCCAAACAATGTTACTGC CCTCCTGCACCAATACTGTGACTTCCAAACAATGTTACTGC < 41bp 1 0.585089503857905 1 0.921472311019897 experiment 0.829820992284191 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990838 chr1:990826 . . 0 hm6A_associated_SNPs_2107 0 0 1 4 990816 990839 mRNA hsa-miR-27b AGRN miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990838 + 990818 990858 41 CCTCCTGCGCCAATACTGTGACTTCCAAACAATGTTACTGC CCTCCTGCACCAATACTGTGACTTCCAAACAATGTTACTGC < 41bp 1 0.585089503857905 1 0.921472311019897 experiment 0.829820992284191 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990838 chr1:990826 . . 0 hm6A_associated_SNPs_2107 0 0 1 4 990818 990837 mRNA hsa-miR-144 AGRN miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990846 + 990826 990866 41 GCCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA ACCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA < 41bp 1 0.604487037188863 1 0.862330853939056 experiment 0.791025925622273 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990846 chr1:990826 . . 0 hm6A_associated_SNPs_2108 0 0 1 4 990816 990839 mRNA hsa-miR-27a AGRN miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990846 + 990826 990866 41 GCCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA ACCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA < 41bp 1 0.604487037188863 1 0.862330853939056 experiment 0.791025925622273 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990846 chr1:990826 . . 0 hm6A_associated_SNPs_2108 0 0 1 4 990820 990842 mRNA hsa-miR-224 AGRN miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990846 + 990826 990866 41 GCCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA ACCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA < 41bp 1 0.604487037188863 1 0.862330853939056 experiment 0.791025925622273 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990846 chr1:990826 . . 0 hm6A_associated_SNPs_2108 0 0 1 4 990816 990839 mRNA hsa-miR-27b AGRN miRanda miRanda
14034 chr1 990826 990826 1 + G A rs187481882 990846 + 990826 990866 41 GCCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA ACCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA < 41bp 1 0.604487037188863 1 0.862330853939056 experiment 0.791025925622273 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990846 chr1:990826 . . 0 hm6A_associated_SNPs_2108 0 0 1 4 990818 990837 mRNA hsa-miR-144 AGRN miRanda miRanda
14034 chr1 990839 990839 1 + C T rs13129 990838 + 990818 990858 41 CCTCCTGCGCCAATACTGTGACTTCCAAACAATGTTACTGC CCTCCTGCGCCAATACTGTGATTTCCAAACAATGTTACTGC Direct Loss 1 0.583799650494337 1 0.870314538478851 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990838 chr1:990839 . . 0 hm6A_associated_SNPs_2109 0 0 1 3 990816 990839 mRNA hsa-miR-27a AGRN miRanda miRanda
14034 chr1 990839 990839 1 + C T rs13129 990838 + 990818 990858 41 CCTCCTGCGCCAATACTGTGACTTCCAAACAATGTTACTGC CCTCCTGCGCCAATACTGTGATTTCCAAACAATGTTACTGC Direct Loss 1 0.583799650494337 1 0.870314538478851 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990838 chr1:990839 . . 0 hm6A_associated_SNPs_2109 0 0 1 3 990820 990842 mRNA hsa-miR-224 AGRN miRanda miRanda
14034 chr1 990839 990839 1 + C T rs13129 990838 + 990818 990858 41 CCTCCTGCGCCAATACTGTGACTTCCAAACAATGTTACTGC CCTCCTGCGCCAATACTGTGATTTCCAAACAATGTTACTGC Direct Loss 1 0.583799650494337 1 0.870314538478851 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990838 chr1:990839 . . 0 hm6A_associated_SNPs_2109 0 0 1 3 990816 990839 mRNA hsa-miR-27b AGRN miRanda miRanda
14034 chr1 990839 990839 1 + C T rs13129 990846 + 990826 990866 41 GCCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA GCCAATACTGTGATTTCCAAACAATGTTACTGCTGGGCACA < 41bp 1 0.615660131200589 1 0.845451831817627 experiment 0.768679737598823 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 14 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990846 chr1:990839 . . 0 hm6A_associated_SNPs_2110 0 0 1 3 990816 990839 mRNA hsa-miR-27a AGRN miRanda miRanda
14034 chr1 990839 990839 1 + C T rs13129 990846 + 990826 990866 41 GCCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA GCCAATACTGTGATTTCCAAACAATGTTACTGCTGGGCACA < 41bp 1 0.615660131200589 1 0.845451831817627 experiment 0.768679737598823 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 14 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990846 chr1:990839 . . 0 hm6A_associated_SNPs_2110 0 0 1 3 990820 990842 mRNA hsa-miR-224 AGRN miRanda miRanda
14034 chr1 990839 990839 1 + C T rs13129 990846 + 990826 990866 41 GCCAATACTGTGACTTCCAAACAATGTTACTGCTGGGCACA GCCAATACTGTGATTTCCAAACAATGTTACTGCTGGGCACA < 41bp 1 0.615660131200589 1 0.845451831817627 experiment 0.768679737598823 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 14 AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990846 chr1:990839 . . 0 hm6A_associated_SNPs_2110 0 0 1 3 990816 990839 mRNA hsa-miR-27b AGRN miRanda miRanda
14034 chr1 1247000 1247000 1 + G A rs554539884 1247004 + 1246984 1247024 41 TTGTTCAGCTTTTACTGGAAACTGCTGTCTAGGACCACCTG TTGTTCAGCTTTTACTAGAAACTGCTGTCTAGGACCACCTG < 41bp 1 0.538689915081496 1 0.906329095363617 experiment 0.922620169837009 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 INTS11;PUSL1 ENSG00000127054;ENSG00000169972 UTR3 Human other chr1:1247004 chr1:1247000 . . 0 hm6A_associated_SNPs_2123 0 0 1 1 1247000 1247027 mRNA hsa-miR-34c-5p PUSL1 miRanda miRanda
14034 chr1 1247000 1247000 1 + G A rs554539884 1247017 + 1246997 1247037 41 ACTGGAAACTGCTGTCTAGGACCACCTGCCCTAACCAGGAA ACTAGAAACTGCTGTCTAGGACCACCTGCCCTAACCAGGAA < 41bp 1 0.481756606366149 1 0.876649737358093 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 4 INTS11;PUSL1 ENSG00000127054;ENSG00000169972 UTR3 Human other chr1:1247017 chr1:1247000 . . 0 hm6A_associated_SNPs_2124 0 0 1 1 1247000 1247027 mRNA hsa-miR-34c-5p PUSL1 miRanda miRanda
14034 chr1 1336361 1336361 1 + G T rs559819406 1336348 + 1336328 1336368 41 CGCCCAGGGCTCTGTCCTTGACCCTGTTGTCCAGGACTGTT CGCCCAGGGCTCTGTCCTTGACCCTGTTGTCCATGACTGTT < 41bp 1 0.580901137209749 1 0.842649817466736 experiment 0.838197725580502 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336348 chr1:1336361 . . 0 hm6A_associated_SNPs_2131 0 0 1 2 1336349 1336369 mRNA hsa-miR-212 LOC148413 miRanda miRanda
14034 chr1 1336361 1336361 1 + G T rs559819406 1336348 + 1336328 1336368 41 CGCCCAGGGCTCTGTCCTTGACCCTGTTGTCCAGGACTGTT CGCCCAGGGCTCTGTCCTTGACCCTGTTGTCCATGACTGTT < 41bp 1 0.580901137209749 1 0.842649817466736 experiment 0.838197725580502 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336348 chr1:1336361 . . 0 hm6A_associated_SNPs_2131 0 0 1 2 1336346 1336369 mRNA hsa-miR-132 LOC148413 miRanda miRanda
14034 chr1 1336361 1336361 1 + G T rs559819406 1336381 + 1336361 1336401 41 GGACTGTTTACCAAGGGCTGACAGGCACTGAGTGCCCCGTG TGACTGTTTACCAAGGGCTGACAGGCACTGAGTGCCCCGTG < 41bp 1 0.724544850954171 1 0.907945036888123 experiment 0.550910298091658 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336381 chr1:1336361 . . 0 hm6A_associated_SNPs_2132 0 0 1 2 1336349 1336369 mRNA hsa-miR-212 LOC148413 miRanda miRanda
14034 chr1 1336361 1336361 1 + G T rs559819406 1336381 + 1336361 1336401 41 GGACTGTTTACCAAGGGCTGACAGGCACTGAGTGCCCCGTG TGACTGTTTACCAAGGGCTGACAGGCACTGAGTGCCCCGTG < 41bp 1 0.724544850954171 1 0.907945036888123 experiment 0.550910298091658 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336381 chr1:1336361 . . 0 hm6A_associated_SNPs_2132 0 0 1 2 1336346 1336369 mRNA hsa-miR-132 LOC148413 miRanda miRanda
14034 chr1 1336369 1336369 1 + T A rs531940789 1336381 + 1336361 1336401 41 GGACTGTTTACCAAGGGCTGACAGGCACTGAGTGCCCCGTG GGACTGTTAACCAAGGGCTGACAGGCACTGAGTGCCCCGTG < 41bp 1 0.739025414042853 1 0.937817692756653 experiment 0.521949171914293 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336381 chr1:1336369 . . 0 hm6A_associated_SNPs_2133 0 0 1 2 1336349 1336369 mRNA hsa-miR-212 LOC148413 miRanda miRanda
14034 chr1 1336369 1336369 1 + T A rs531940789 1336381 + 1336361 1336401 41 GGACTGTTTACCAAGGGCTGACAGGCACTGAGTGCCCCGTG GGACTGTTAACCAAGGGCTGACAGGCACTGAGTGCCCCGTG < 41bp 1 0.739025414042853 1 0.937817692756653 experiment 0.521949171914293 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336381 chr1:1336369 . . 0 hm6A_associated_SNPs_2133 0 0 1 2 1336346 1336369 mRNA hsa-miR-132 LOC148413 miRanda miRanda
14034 chr1 1337334 1337334 1 + G C rs1171 1337325 + 1337305 1337345 41 TTCATTCACACAAAACATGGACATCATCTGTGAGGCTCTGT TTCATTCACACAAAACATGGACATCATCTCTGAGGCTCTGT < 41bp 1 0.716884115686661 1 0.732882022857666 experiment 0.566231768626678 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 LOC148413 ENSG00000224870;ENSG00000242485 UTR3 Human other chr1:1337325 chr1:1337334 . . 0 hm6A_associated_SNPs_2139 0 0 1 2 1337332 1337353 mRNA hsa-miR-330-5p LOC148413 miRanda miRanda
14034 chr1 1337334 1337334 1 + G C rs1171 1337325 + 1337305 1337345 41 TTCATTCACACAAAACATGGACATCATCTGTGAGGCTCTGT TTCATTCACACAAAACATGGACATCATCTCTGAGGCTCTGT < 41bp 1 0.716884115686661 1 0.732882022857666 experiment 0.566231768626678 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 LOC148413 ENSG00000224870;ENSG00000242485 UTR3 Human other chr1:1337325 chr1:1337334 . . 0 hm6A_associated_SNPs_2139 0 0 1 2 1337333 1337353 mRNA hsa-miR-326 LOC148413 miRanda miRanda
14034 chr1 1337415 1337415 1 - A G rs371258056 1337432 - 1337412 1337452 41 TGTATTGATTAGGAAAAGAGACAGAGTAATTTGCAGTTTGT TGTATTGATTAGGAAAAGAGACAGAGTAATTTGCAGTCTGT < 41bp 1 0.730149372125444 1 0.50022953748703 experiment 0.539701255749111 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 LOC148413 ENSG00000224870;ENSG00000242485 UTR3 Human other chr1:1337432 chr1:1337415 . . 0 hm6A_associated_SNPs_2140 0 0 1 1 1337410 1337435 mRNA hsa-miR-495 MRPL20 miRanda miRanda
14034 chr1 1469921 1469921 1 + C A rs187397098 1469941 + 1469921 1469961 41 CGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA AGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA < 41bp 1 0.233988373054864 1 0.322214156389236 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469941 chr1:1469921 . . 0 hm6A_associated_SNPs_2150 0 0 1 2 1469916 1469939 mRNA hsa-miR-199a-5p ATAD3A miRanda miRanda
14034 chr1 1469921 1469921 1 + C A rs187397098 1469941 + 1469921 1469961 41 CGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA AGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA < 41bp 1 0.233988373054864 1 0.322214156389236 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469941 chr1:1469921 . . 0 hm6A_associated_SNPs_2150 0 0 1 2 1469917 1469939 mRNA hsa-miR-199b-5p ATAD3A miRanda miRanda
14034 chr1 1469937 1469937 1 + G A rs191784425 1469941 + 1469921 1469961 41 CGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA CGATCTTTCACACACTAGTGACCCTGAGAGAGGAGGGAGGA < 41bp 1 0.324208154228826 1 0.311162233352661 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469941 chr1:1469937 . . 0 hm6A_associated_SNPs_2151 0 0 1 2 1469916 1469939 mRNA hsa-miR-199a-5p ATAD3A miRanda miRanda
14034 chr1 1469937 1469937 1 + G A rs191784425 1469941 + 1469921 1469961 41 CGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA CGATCTTTCACACACTAGTGACCCTGAGAGAGGAGGGAGGA < 41bp 1 0.324208154228826 1 0.311162233352661 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469941 chr1:1469937 . . 0 hm6A_associated_SNPs_2151 0 0 1 2 1469917 1469939 mRNA hsa-miR-199b-5p ATAD3A miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335668 2335688 mRNA hsa-miR-30a RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335665 2335688 mRNA hsa-miR-30c RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335668 2335688 mRNA hsa-miR-30d RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335666 2335688 mRNA hsa-miR-30b RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335663 2335685 mRNA hsa-miR-141 RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335675 2335693 mRNA hsa-miR-190 RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335664 2335685 mRNA hsa-miR-200a RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335668 2335688 mRNA hsa-miR-30e RER1 miRanda miRanda
14034 chr1 2335676 2335676 1 + A G rs1129333 2335695 + 2335675 2335715 41 TACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG TGCCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG < 41bp 1 0.531923741054637 1 0.355035901069641 experiment 0.936152517890726 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335695 chr1:2335676 . . 0 hm6A_associated_SNPs_2163 0 0 1 9 2335674 2335693 mRNA hsa-miR-190b RER1 miRanda miRanda
14034 chr1 2336560 2336560 1 + T C rs142302722 2336558 + 2336538 2336578 41 GCAGATTTCTGTTTTCTAAAACTGGAAGCGACCTTGACGTG GCAGATTTCTGTTTTCTAAAACCGGAAGCGACCTTGACGTG < 41bp 1 0.137966510822546 1 0.650455236434937 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 PEX10;RER1 ENSG00000157911;ENSG00000157916 UTR3 Human other chr1:2336558 chr1:2336560 . . 0 hm6A_associated_SNPs_2169 0 0 1 3 2336550 2336573 mRNA hsa-miR-18a RER1 miRanda miRanda
14034 chr1 2336560 2336560 1 + T C rs142302722 2336558 + 2336538 2336578 41 GCAGATTTCTGTTTTCTAAAACTGGAAGCGACCTTGACGTG GCAGATTTCTGTTTTCTAAAACCGGAAGCGACCTTGACGTG < 41bp 1 0.137966510822546 1 0.650455236434937 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 PEX10;RER1 ENSG00000157911;ENSG00000157916 UTR3 Human other chr1:2336558 chr1:2336560 . . 0 hm6A_associated_SNPs_2169 0 0 1 3 2336538 2336564 mRNA hsa-miR-145 RER1 miRanda miRanda
14034 chr1 2336560 2336560 1 + T C rs142302722 2336558 + 2336538 2336578 41 GCAGATTTCTGTTTTCTAAAACTGGAAGCGACCTTGACGTG GCAGATTTCTGTTTTCTAAAACCGGAAGCGACCTTGACGTG < 41bp 1 0.137966510822546 1 0.650455236434937 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 PEX10;RER1 ENSG00000157911;ENSG00000157916 UTR3 Human other chr1:2336558 chr1:2336560 . . 0 hm6A_associated_SNPs_2169 0 0 1 3 2336550 2336573 mRNA hsa-miR-18b RER1 miRanda miRanda
14034 chr1 2336562 2336562 1 + G A rs150136015 2336558 + 2336538 2336578 41 GCAGATTTCTGTTTTCTAAAACTGGAAGCGACCTTGACGTG GCAGATTTCTGTTTTCTAAAACTGAAAGCGACCTTGACGTG < 41bp 1 0.331652555367532 1 0.803201258182526 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 PEX10;RER1 ENSG00000157911;ENSG00000157916 UTR3 Human other chr1:2336558 chr1:2336562 . . 0 hm6A_associated_SNPs_2170 0 0 1 3 2336550 2336573 mRNA hsa-miR-18a RER1 miRanda miRanda
14034 chr1 2336562 2336562 1 + G A rs150136015 2336558 + 2336538 2336578 41 GCAGATTTCTGTTTTCTAAAACTGGAAGCGACCTTGACGTG GCAGATTTCTGTTTTCTAAAACTGAAAGCGACCTTGACGTG < 41bp 1 0.331652555367532 1 0.803201258182526 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 PEX10;RER1 ENSG00000157911;ENSG00000157916 UTR3 Human other chr1:2336558 chr1:2336562 . . 0 hm6A_associated_SNPs_2170 0 0 1 3 2336538 2336564 mRNA hsa-miR-145 RER1 miRanda miRanda
14034 chr1 2336562 2336562 1 + G A rs150136015 2336558 + 2336538 2336578 41 GCAGATTTCTGTTTTCTAAAACTGGAAGCGACCTTGACGTG GCAGATTTCTGTTTTCTAAAACTGAAAGCGACCTTGACGTG < 41bp 1 0.331652555367532 1 0.803201258182526 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 PEX10;RER1 ENSG00000157911;ENSG00000157916 UTR3 Human other chr1:2336558 chr1:2336562 . . 0 hm6A_associated_SNPs_2170 0 0 1 3 2336550 2336573 mRNA hsa-miR-18b RER1 miRanda miRanda
14034 chr1 3650094 3650094 1 + A G rs559905892 3650113 + 3650093 3650133 41 TAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACACCAGTG TGGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACACCAGTG < 41bp 1 0.700834703933377 1 0.995448231697083 experiment 0.598330592133246 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 2 TP73 ENSG00000078900 UTR3 Human protein_coding chr1:3650113 chr1:3650094 . . 0 hm6A_associated_SNPs_2184 0 0 1 1 3650073 3650095 mRNA hsa-miR-361-5p TP73 miRanda miRanda
14034 chr1 6683447 6683447 1 + G A rs143304057 6683441 + 6683421 6683461 41 AATAGTAAGCTGGTTTAGAAACTGACGAGGGCAAACAGCCA AATAGTAAGCTGGTTTAGAAACTGACAAGGGCAAACAGCCA < 41bp 1 0.184300290033499 1 0.952717661857605 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 PHF13 ENSG00000116273 UTR3 Human protein_coding chr1:6683441 chr1:6683447 . . 0 hm6A_associated_SNPs_2195 0 0 1 1 6683426 6683447 mRNA hsa-miR-223 PHF13 miRanda miRanda
14034 chr1 6683611 6683611 1 + A G rs112018384 6683616 + 6683596 6683636 41 TGCATTTAAGAATCCATGTGACTTTAGAATGGAACTGCCGG TGCATTTAAGAATCCGTGTGACTTTAGAATGGAACTGCCGG < 41bp 1 0.302720569026073 1 0.977850139141083 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 PHF13 ENSG00000116273 UTR3 Human protein_coding chr1:6683616 chr1:6683611 . . 0 hm6A_associated_SNPs_2196 0 0 1 1 6683601 6683620 mRNA hsa-miR-224 PHF13 miRanda miRanda
14034 chr1 6683611 6683611 1 + A G rs112018384 6683629 + 6683609 6683649 41 CCATGTGACTTTAGAATGGAACTGCCGGCCCTGGCAACTGT CCGTGTGACTTTAGAATGGAACTGCCGGCCCTGGCAACTGT < 41bp 1 0.436800867649408 1 0.977416098117828 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 PHF13 ENSG00000116273 UTR3 Human protein_coding chr1:6683629 chr1:6683611 . . 0 hm6A_associated_SNPs_2197 0 0 1 1 6683601 6683620 mRNA hsa-miR-224 PHF13 miRanda miRanda
14034 chr1 6694927 6694927 1 - C G rs2294532 6694926 - 6694906 6694946 41 GGCAAGGGCAGCTCAAGAGGACAGGACCAGGCGCTTGGCAA GGCAAGGGCAGCTCAAGAGCACAGGACCAGGCGCTTGGCAA Direct Loss 1 0.643186552717912 1 0.940656900405884 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 DNAJC11;THAP3 ENSG00000007923;ENSG00000041988 UTR3 Human other chr1:6694926 chr1:6694927 . . 0 hm6A_associated_SNPs_2206 0 0 1 1 6694902 6694931 mRNA hsa-miR-346 DNAJC11 miRanda miRanda
14034 chr1 7840342 7840342 1 + A G rs139737794 7840353 + 7840333 7840373 41 TTTAAAAAAATTTTTAAAGAACTATGGCTATGACCAAAGCT TTTAAAAAAGTTTTTAAAGAACTATGGCTATGACCAAAGCT < 41bp 1 0.35873145810314 1 0.945047378540039 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 VAMP3 ENSG00000049245 UTR3 Human protein_coding chr1:7840353 chr1:7840342 . . 0 hm6A_associated_SNPs_2207 0 0 1 1 7840325 7840345 mRNA hsa-miR-590-3p VAMP3 miRanda miRanda
14034 chr1 7841089 7841089 1 + G A rs187177904 7841081 + 7841061 7841101 41 ACTGAGGGAGAAAGACACAGACTTTATCGCTCTGTGGCTCA ACTGAGGGAGAAAGACACAGACTTTATCACTCTGTGGCTCA < 41bp 1 0.269792873434687 1 0.978569269180298 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 VAMP3 ENSG00000049245 UTR3 Human protein_coding chr1:7841081 chr1:7841089 . . 0 hm6A_associated_SNPs_2209 0 0 1 1 7841080 7841105 mRNA hsa-miR-335 VAMP3 miRanda miRanda
14034 chr1 7841422 7841422 1 + C T rs150123963 7841408 + 7841388 7841428 41 ACCCACTGGCTCCTGCATTAACCCAGAAATACCTCGCTTCT ACCCACTGGCTCCTGCATTAACCCAGAAATACCTTGCTTCT < 41bp 1 0.117543375342444 1 0.39910700917244 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 VAMP3 ENSG00000049245 UTR3 Human protein_coding chr1:7841408 chr1:7841422 . . 0 hm6A_associated_SNPs_2211 0 0 1 2 7841404 7841423 mRNA hsa-miR-202 VAMP3 miRanda miRanda
14034 chr1 7841422 7841422 1 + C T rs150123963 7841408 + 7841388 7841428 41 ACCCACTGGCTCCTGCATTAACCCAGAAATACCTCGCTTCT ACCCACTGGCTCCTGCATTAACCCAGAAATACCTTGCTTCT < 41bp 1 0.117543375342444 1 0.39910700917244 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 VAMP3 ENSG00000049245 UTR3 Human protein_coding chr1:7841408 chr1:7841422 . . 0 hm6A_associated_SNPs_2211 0 0 1 2 7841417 7841439 mRNA hsa-miR-542-3p VAMP3 miRanda miRanda
14034 chr1 9664443 9664443 1 + G A rs146782539 9664458 + 9664438 9664478 41 CTTTCGTAGAGTTTTGTGTGACTTTTTAAATTATTCATGTG CTTTCATAGAGTTTTGTGTGACTTTTTAAATTATTCATGTG < 41bp 1 0.0626752185916159 1 0.663407862186432 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 TMEM201 ENSG00000188807 UTR3 Human protein_coding chr1:9664458 chr1:9664443 . . 0 hm6A_associated_SNPs_2232 0 0 1 2 9664442 9664462 mRNA hsa-miR-224 TMEM201 miRanda miRanda
14034 chr1 9664443 9664443 1 + G A rs146782539 9664458 + 9664438 9664478 41 CTTTCGTAGAGTTTTGTGTGACTTTTTAAATTATTCATGTG CTTTCATAGAGTTTTGTGTGACTTTTTAAATTATTCATGTG < 41bp 1 0.0626752185916159 1 0.663407862186432 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 TMEM201 ENSG00000188807 UTR3 Human protein_coding chr1:9664458 chr1:9664443 . . 0 hm6A_associated_SNPs_2232 0 0 1 2 9664438 9664459 mRNA hsa-miR-377 TMEM201 miRanda miRanda
14034 chr1 9788490 9788490 1 + T C rs79044597 9788503 + 9788483 9788523 41 CCTAACATATCAGGCCATGGACTCAGGACCTGCCCGGTGAT CCTAACACATCAGGCCATGGACTCAGGACCTGCCCGGTGAT < 41bp 1 0.469008858955634 1 0.928820550441742 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 8 PIK3CD ENSG00000171608 UTR3 Human protein_coding chr1:9788503 chr1:9788490 . . 0 hm6A_associated_SNPs_2239 0 0 0 2 9788473 9788494 mRNA hsa-miR-190 PIK3CD miRanda miRanda
14034 chr1 9788490 9788490 1 + T C rs79044597 9788503 + 9788483 9788523 41 CCTAACATATCAGGCCATGGACTCAGGACCTGCCCGGTGAT CCTAACACATCAGGCCATGGACTCAGGACCTGCCCGGTGAT < 41bp 1 0.469008858955634 1 0.928820550441742 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 8 PIK3CD ENSG00000171608 UTR3 Human protein_coding chr1:9788503 chr1:9788490 . . 0 hm6A_associated_SNPs_2239 0 0 0 2 9788473 9788494 mRNA hsa-miR-190b PIK3CD miRanda miRanda
14034 chr1 9788518 9788518 1 + G A rs145994876 9788503 + 9788483 9788523 41 CCTAACATATCAGGCCATGGACTCAGGACCTGCCCGGTGAT CCTAACATATCAGGCCATGGACTCAGGACCTGCCCAGTGAT < 41bp 1 0.480359088017333 1 0.933201432228088 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 36 PIK3CD ENSG00000171608 UTR3 Human protein_coding chr1:9788503 chr1:9788518 . . 0 hm6A_associated_SNPs_2241 0 0 1 2 9788517 9788538 mRNA hsa-miR-539 PIK3CD miRanda miRanda
14034 chr1 9788518 9788518 1 + G A rs145994876 9788503 + 9788483 9788523 41 CCTAACATATCAGGCCATGGACTCAGGACCTGCCCGGTGAT CCTAACATATCAGGCCATGGACTCAGGACCTGCCCAGTGAT < 41bp 1 0.480359088017333 1 0.933201432228088 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 36 PIK3CD ENSG00000171608 UTR3 Human protein_coding chr1:9788503 chr1:9788518 . . 0 hm6A_associated_SNPs_2241 0 0 1 2 9788512 9788532 mRNA hsa-miR-421 PIK3CD miRanda miRanda
14034 chr1 10364849 10364849 1 + C G rs536575944 10364841 + 10364821 10364861 41 ACTGGTTTTATATTGTTAAGACAAAACACTGGTAAAAGTTT ACTGGTTTTATATTGTTAAGACAAAACAGTGGTAAAAGTTT < 41bp 1 0.554631209095503 1 0.90341591835022 experiment 0.890737581808994 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10364841 chr1:10364849 . . 0 hm6A_associated_SNPs_2250 0 0 1 3 10364830 10364853 mRNA hsa-miR-199a-5p KIF1B miRanda miRanda
14034 chr1 10364849 10364849 1 + C G rs536575944 10364841 + 10364821 10364861 41 ACTGGTTTTATATTGTTAAGACAAAACACTGGTAAAAGTTT ACTGGTTTTATATTGTTAAGACAAAACAGTGGTAAAAGTTT < 41bp 1 0.554631209095503 1 0.90341591835022 experiment 0.890737581808994 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10364841 chr1:10364849 . . 0 hm6A_associated_SNPs_2250 0 0 1 3 10364830 10364853 mRNA hsa-miR-199b-5p KIF1B miRanda miRanda
14034 chr1 10364849 10364849 1 + C G rs536575944 10364841 + 10364821 10364861 41 ACTGGTTTTATATTGTTAAGACAAAACACTGGTAAAAGTTT ACTGGTTTTATATTGTTAAGACAAAACAGTGGTAAAAGTTT < 41bp 1 0.554631209095503 1 0.90341591835022 experiment 0.890737581808994 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10364841 chr1:10364849 . . 0 hm6A_associated_SNPs_2250 0 0 1 3 10364847 10364867 mRNA hsa-miR-653 KIF1B miRanda miRanda
14034 chr1 10438966 10438966 1 + A G rs567547345 10438977 + 10438957 10438997 41 TGTTAAAACATAGGTCACTAACTGTGATGTTATTTGTTTTC TGTTAAAACGTAGGTCACTAACTGTGATGTTATTTGTTTTC < 41bp 1 0.131958587631201 1 0.848939418792725 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10438977 chr1:10438966 . . 0 hm6A_associated_SNPs_2257 3 0 0 4 10438964 10438984 mRNA hsa-miR-27a KIF1B miRanda miRanda
14034 chr1 10438966 10438966 1 + A G rs567547345 10438977 + 10438957 10438997 41 TGTTAAAACATAGGTCACTAACTGTGATGTTATTTGTTTTC TGTTAAAACGTAGGTCACTAACTGTGATGTTATTTGTTTTC < 41bp 1 0.131958587631201 1 0.848939418792725 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10438977 chr1:10438966 . . 0 hm6A_associated_SNPs_2257 3 0 0 4 10438954 10438974 mRNA hsa-miR-192 KIF1B miRanda miRanda
14034 chr1 10438966 10438966 1 + A G rs567547345 10438977 + 10438957 10438997 41 TGTTAAAACATAGGTCACTAACTGTGATGTTATTTGTTTTC TGTTAAAACGTAGGTCACTAACTGTGATGTTATTTGTTTTC < 41bp 1 0.131958587631201 1 0.848939418792725 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10438977 chr1:10438966 . . 0 hm6A_associated_SNPs_2257 3 0 0 4 10438954 10438974 mRNA hsa-miR-215 KIF1B miRanda miRanda
14034 chr1 10438966 10438966 1 + A G rs567547345 10438977 + 10438957 10438997 41 TGTTAAAACATAGGTCACTAACTGTGATGTTATTTGTTTTC TGTTAAAACGTAGGTCACTAACTGTGATGTTATTTGTTTTC < 41bp 1 0.131958587631201 1 0.848939418792725 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10438977 chr1:10438966 . . 0 hm6A_associated_SNPs_2257 3 0 0 4 10438964 10438984 mRNA hsa-miR-27b KIF1B miRanda miRanda
14034 chr1 11718627 11718627 1 + G A rs142482421 11718616 + 11718596 11718636 41 CCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT CCTCAAGTCCCAGGTGGTGGACCTCAAGGCCAAAGGGTATT < 41bp 1 0.107254598413451 1 0.800398945808411 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 32 FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718616 chr1:11718627 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_2268 0 0 1 1 11718619 11718642 mRNA hsa-miR-150 FBXO44 miRanda miRanda
14034 chr1 12571994 12571994 1 + A G rs41279476 12571996 + 12571976 12572016 41 TCTGGTTCTCTATTATGTAAACACTATTACAGTCACCAGTG TCTGGTTCTCTATTATGTGAACACTATTACAGTCACCAGTG < 41bp 1 0.0589741325527978 1 0.367527961730957 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 19 VPS13D ENSG00000048707 UTR3 Human protein_coding chr1:12571996 chr1:12571994 . . 0 hm6A_associated_SNPs_2288 0 0 1 1 12571991 12572012 mRNA hsa-miR-134 VPS13D miRanda miRanda
14034 chr1 13943557 13943557 1 + G A rs564323771 13943575 + 13943555 13943595 41 GTGGGGTCCTGTTGAAAAGAACAAAATAAAGGAGCCCAAGG GTAGGGTCCTGTTGAAAAGAACAAAATAAAGGAGCCCAAGG < 41bp 1 0.309742419690899 1 0.319444954395294 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 PDPN ENSG00000162493 UTR3 Human protein_coding chr1:13943575 chr1:13943557 . . 0 hm6A_associated_SNPs_2292 0 0 1 1 13943547 13943570 mRNA hsa-miR-421 PDPN miRanda miRanda
14034 chr1 16061123 16061123 1 + A G rs148967579 16061133 + 16061113 16061153 41 CCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTG CCAGCCTGGCGTCCATGTTGACATCTTCTGACTGTCCCCTG < 41bp 1 0.517902682692479 1 0.796505033969879 experiment 0.964194634615042 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 PLEKHM2 ENSG00000237938 ncRNA_intronic Human antisense chr1:16061133 chr1:16061123 . . 0 hm6A_associated_SNPs_2326 0 0 1 1 16061112 16061135 mRNA hsa-miR-505 PLEKHM2 miRanda miRanda
14034 chr1 16061123 16061123 1 + A G rs148967579 16061143 + 16061123 16061163 41 ATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGA GTCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGA < 41bp 1 0.571875918749755 1 0.847887694835663 experiment 0.856248162500489 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 PLEKHM2 ENSG00000237938 ncRNA_intronic Human antisense chr1:16061143 chr1:16061123 . . 0 hm6A_associated_SNPs_2327 0 0 1 1 16061112 16061135 mRNA hsa-miR-505 PLEKHM2 miRanda miRanda
14034 chr1 16266013 16266013 1 + G A rs533061279 16266020 + 16266000 16266040 41 GGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG GGAAGAAGCTGCCAAAGGGGACAGACTCCACTGCCAGACGG < 41bp 1 0.7116959292143 1 0.980762362480164 experiment 0.576608141571399 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 SPEN ENSG00000065526 UTR3 Human protein_coding chr1:16266020 chr1:16266013 . . 0 hm6A_associated_SNPs_2340 0 0 1 3 16266012 16266035 mRNA hsa-miR-34c-5p SPEN miRanda miRanda
14034 chr1 16266013 16266013 1 + G A rs533061279 16266020 + 16266000 16266040 41 GGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG GGAAGAAGCTGCCAAAGGGGACAGACTCCACTGCCAGACGG < 41bp 1 0.7116959292143 1 0.980762362480164 experiment 0.576608141571399 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 SPEN ENSG00000065526 UTR3 Human protein_coding chr1:16266020 chr1:16266013 . . 0 hm6A_associated_SNPs_2340 0 0 1 3 16266012 16266035 mRNA hsa-miR-449a SPEN miRanda miRanda
14034 chr1 16266013 16266013 1 + G A rs533061279 16266020 + 16266000 16266040 41 GGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG GGAAGAAGCTGCCAAAGGGGACAGACTCCACTGCCAGACGG < 41bp 1 0.7116959292143 1 0.980762362480164 experiment 0.576608141571399 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 SPEN ENSG00000065526 UTR3 Human protein_coding chr1:16266020 chr1:16266013 . . 0 hm6A_associated_SNPs_2340 0 0 1 3 16266012 16266035 mRNA hsa-miR-449b SPEN miRanda miRanda
14034 chr1 16266013 16266013 1 + G A rs533061279 16266024 + 16266004 16266044 41 GAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAG GAAGCTGCCAAAGGGGACAGACTCCACTGCCAGACGGCCAG < 41bp 1 0.738507408413168 1 0.982133984565735 experiment 0.522985183173663 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 SPEN ENSG00000065526 UTR3 Human protein_coding chr1:16266024 chr1:16266013 . . 0 hm6A_associated_SNPs_2341 0 0 1 3 16266012 16266035 mRNA hsa-miR-34c-5p SPEN miRanda miRanda
14034 chr1 16266013 16266013 1 + G A rs533061279 16266024 + 16266004 16266044 41 GAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAG GAAGCTGCCAAAGGGGACAGACTCCACTGCCAGACGGCCAG < 41bp 1 0.738507408413168 1 0.982133984565735 experiment 0.522985183173663 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 SPEN ENSG00000065526 UTR3 Human protein_coding chr1:16266024 chr1:16266013 . . 0 hm6A_associated_SNPs_2341 0 0 1 3 16266012 16266035 mRNA hsa-miR-449a SPEN miRanda miRanda
14034 chr1 16266013 16266013 1 + G A rs533061279 16266024 + 16266004 16266044 41 GAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAG GAAGCTGCCAAAGGGGACAGACTCCACTGCCAGACGGCCAG < 41bp 1 0.738507408413168 1 0.982133984565735 experiment 0.522985183173663 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 SPEN ENSG00000065526 UTR3 Human protein_coding chr1:16266024 chr1:16266013 . . 0 hm6A_associated_SNPs_2341 0 0 1 3 16266012 16266035 mRNA hsa-miR-449b SPEN miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721794 + 16721774 16721814 41 TCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCC TCCGCCCACTGTGACCTTGAACCTCATGCACTGTGACCTCC < 41bp 1 0.789243434040829 1 0.387887537479401 experiment 0.421513131918342 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721794 chr1:16721797 . . 0 hm6A_associated_SNPs_2343 0 0 1 6 16721789 16721810 mRNA hsa-miR-27a C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721794 + 16721774 16721814 41 TCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCC TCCGCCCACTGTGACCTTGAACCTCATGCACTGTGACCTCC < 41bp 1 0.789243434040829 1 0.387887537479401 experiment 0.421513131918342 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721794 chr1:16721797 . . 0 hm6A_associated_SNPs_2343 0 0 1 6 16721786 16721807 mRNA hsa-miR-148a C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721794 + 16721774 16721814 41 TCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCC TCCGCCCACTGTGACCTTGAACCTCATGCACTGTGACCTCC < 41bp 1 0.789243434040829 1 0.387887537479401 experiment 0.421513131918342 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721794 chr1:16721797 . . 0 hm6A_associated_SNPs_2343 0 0 1 6 16721789 16721810 mRNA hsa-miR-27b C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721794 + 16721774 16721814 41 TCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCC TCCGCCCACTGTGACCTTGAACCTCATGCACTGTGACCTCC < 41bp 1 0.789243434040829 1 0.387887537479401 experiment 0.421513131918342 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721794 chr1:16721797 . . 0 hm6A_associated_SNPs_2343 0 0 1 6 16721789 16721809 mRNA hsa-miR-128 C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721794 + 16721774 16721814 41 TCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCC TCCGCCCACTGTGACCTTGAACCTCATGCACTGTGACCTCC < 41bp 1 0.789243434040829 1 0.387887537479401 experiment 0.421513131918342 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721794 chr1:16721797 . . 0 hm6A_associated_SNPs_2343 0 0 1 6 16721787 16721807 mRNA hsa-miR-152 C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721794 + 16721774 16721814 41 TCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCC TCCGCCCACTGTGACCTTGAACCTCATGCACTGTGACCTCC < 41bp 1 0.789243434040829 1 0.387887537479401 experiment 0.421513131918342 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721794 chr1:16721797 . . 0 hm6A_associated_SNPs_2343 0 0 1 6 16721786 16721807 mRNA hsa-miR-148b C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721809 + 16721789 16721829 41 CTTGAACCCCATGCACTGTGACCTCCCCCCTTCTCCCCCTT CTTGAACCTCATGCACTGTGACCTCCCCCCTTCTCCCCCTT < 41bp 1 0.735546185359576 1 0.632601499557495 experiment 0.528907629280849 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721809 chr1:16721797 . . 0 hm6A_associated_SNPs_2344 0 0 1 6 16721789 16721810 mRNA hsa-miR-27a C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721809 + 16721789 16721829 41 CTTGAACCCCATGCACTGTGACCTCCCCCCTTCTCCCCCTT CTTGAACCTCATGCACTGTGACCTCCCCCCTTCTCCCCCTT < 41bp 1 0.735546185359576 1 0.632601499557495 experiment 0.528907629280849 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721809 chr1:16721797 . . 0 hm6A_associated_SNPs_2344 0 0 1 6 16721786 16721807 mRNA hsa-miR-148a C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721809 + 16721789 16721829 41 CTTGAACCCCATGCACTGTGACCTCCCCCCTTCTCCCCCTT CTTGAACCTCATGCACTGTGACCTCCCCCCTTCTCCCCCTT < 41bp 1 0.735546185359576 1 0.632601499557495 experiment 0.528907629280849 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721809 chr1:16721797 . . 0 hm6A_associated_SNPs_2344 0 0 1 6 16721789 16721810 mRNA hsa-miR-27b C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721809 + 16721789 16721829 41 CTTGAACCCCATGCACTGTGACCTCCCCCCTTCTCCCCCTT CTTGAACCTCATGCACTGTGACCTCCCCCCTTCTCCCCCTT < 41bp 1 0.735546185359576 1 0.632601499557495 experiment 0.528907629280849 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721809 chr1:16721797 . . 0 hm6A_associated_SNPs_2344 0 0 1 6 16721789 16721809 mRNA hsa-miR-128 C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721809 + 16721789 16721829 41 CTTGAACCCCATGCACTGTGACCTCCCCCCTTCTCCCCCTT CTTGAACCTCATGCACTGTGACCTCCCCCCTTCTCCCCCTT < 41bp 1 0.735546185359576 1 0.632601499557495 experiment 0.528907629280849 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721809 chr1:16721797 . . 0 hm6A_associated_SNPs_2344 0 0 1 6 16721787 16721807 mRNA hsa-miR-152 C1orf144 miRanda miRanda
14034 chr1 16721797 16721797 1 + C T rs138678090 16721809 + 16721789 16721829 41 CTTGAACCCCATGCACTGTGACCTCCCCCCTTCTCCCCCTT CTTGAACCTCATGCACTGTGACCTCCCCCCTTCTCCCCCTT < 41bp 1 0.735546185359576 1 0.632601499557495 experiment 0.528907629280849 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16721809 chr1:16721797 . . 0 hm6A_associated_SNPs_2344 0 0 1 6 16721786 16721807 mRNA hsa-miR-148b C1orf144 miRanda miRanda
14034 chr1 16775632 16775632 1 + C G rs77196843 16775618 + 16775598 16775638 41 CAGCAGTGTGAATTTGCAAAACAAGCCCAGAACCCAGACCA CAGCAGTGTGAATTTGCAAAACAAGCCCAGAACCGAGACCA < 41bp 1 0.691376072953258 1 0.070743590593338 experiment 0.617247854093484 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16775618 chr1:16775632 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_2346 0 0 1 1 16775632 16775654 mRNA hsa-miR-145 NECAP2 miRanda miRanda
14034 chr1 16786168 16786168 1 + C A rs279023 16786172 + 16786152 16786192 41 GGTGCTGGAAGCCAGACGGAACAGTGTTGGGGCAGGAAGGT GGTGCTGGAAGCCAGAAGGAACAGTGTTGGGGCAGGAAGGT < 41bp 1 0.623287821692325 1 0.876098155975342 experiment 0.753424356615351 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 NECAP2 ENSG00000157191 UTR3 Human protein_coding chr1:16786172 chr1:16786168 . . 0 hm6A_associated_SNPs_2348 0 0 1 2 16786159 16786180 mRNA hsa-miR-141 NECAP2 miRanda miRanda
14034 chr1 16786168 16786168 1 + C A rs279023 16786172 + 16786152 16786192 41 GGTGCTGGAAGCCAGACGGAACAGTGTTGGGGCAGGAAGGT GGTGCTGGAAGCCAGAAGGAACAGTGTTGGGGCAGGAAGGT < 41bp 1 0.623287821692325 1 0.876098155975342 experiment 0.753424356615351 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 NECAP2 ENSG00000157191 UTR3 Human protein_coding chr1:16786172 chr1:16786168 . . 0 hm6A_associated_SNPs_2348 0 0 1 2 16786159 16786180 mRNA hsa-miR-200a NECAP2 miRanda miRanda
14034 chr1 19585439 19585439 1 + G A rs142072203 19585450 + 19585430 19585470 41 AGGGAACATGATGGGCACTGACCTCCTGTAAAGAATAAAAC AGGGAACATAATGGGCACTGACCTCCTGTAAAGAATAAAAC < 41bp 1 0.723086124580862 1 0.869753360748291 experiment 0.553827750838276 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 MRTO4 ENSG00000053372 UTR3 Human protein_coding chr1:19585450 chr1:19585439 . . 0 hm6A_associated_SNPs_2352 0 0 1 2 19585431 19585454 mRNA hsa-miR-196a MRTO4 miRanda miRanda
14034 chr1 19585439 19585439 1 + G A rs142072203 19585450 + 19585430 19585470 41 AGGGAACATGATGGGCACTGACCTCCTGTAAAGAATAAAAC AGGGAACATAATGGGCACTGACCTCCTGTAAAGAATAAAAC < 41bp 1 0.723086124580862 1 0.869753360748291 experiment 0.553827750838276 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 MRTO4 ENSG00000053372 UTR3 Human protein_coding chr1:19585450 chr1:19585439 . . 0 hm6A_associated_SNPs_2352 0 0 1 2 19585431 19585454 mRNA hsa-miR-196b MRTO4 miRanda miRanda
14034 chr1 19586294 19586294 1 + A G rs1063984 19586292 + 19586272 19586312 41 ACAGCCTTGGGCTGAGAGTGACATCACTGCAAGAGTTGAGA ACAGCCTTGGGCTGAGAGTGACGTCACTGCAAGAGTTGAGA Direct Loss 1 0.604406639281754 1 0.522986650466919 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 23 MRTO4 ENSG00000053372 UTR3 Human protein_coding chr1:19586292 chr1:19586294 . . 0 hm6A_associated_SNPs_2353 0 0 1 1 19586294 19586318 mRNA hsa-miR-149 MRTO4 miRanda miRanda
14034 chr1 19952903 19952903 1 + T A rs72959490 19952908 + 19952888 19952928 41 AGCAGTGACTTCACCTGAGAACATCCCAGCGGGAGGACAAG AGCAGTGACTTCACCAGAGAACATCCCAGCGGGAGGACAAG < 41bp 1 0.78002336999484 1 0.922468483448029 experiment 0.439953260010321 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 MINOS1 ENSG00000270136;ENSG00000173436;ENSG00000270136 UTR5;UTR3 Human other chr1:19952908 chr1:19952903 . . 0 hm6A_associated_SNPs_2363 0 0 1 4 19952884 19952905 mRNA hsa-miR-125a-3p C1orf151 miRanda miRanda
14034 chr1 19952903 19952903 1 + T A rs72959490 19952908 + 19952888 19952928 41 AGCAGTGACTTCACCTGAGAACATCCCAGCGGGAGGACAAG AGCAGTGACTTCACCAGAGAACATCCCAGCGGGAGGACAAG < 41bp 1 0.78002336999484 1 0.922468483448029 experiment 0.439953260010321 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 MINOS1 ENSG00000270136;ENSG00000173436;ENSG00000270136 UTR5;UTR3 Human other chr1:19952908 chr1:19952903 . . 0 hm6A_associated_SNPs_2363 0 0 1 4 19952896 19952905 mRNA hsa-miR-125a-3p C1orf151 miRanda miRanda
14034 chr1 19952903 19952903 1 + T A rs72959490 19952908 + 19952888 19952928 41 AGCAGTGACTTCACCTGAGAACATCCCAGCGGGAGGACAAG AGCAGTGACTTCACCAGAGAACATCCCAGCGGGAGGACAAG < 41bp 1 0.78002336999484 1 0.922468483448029 experiment 0.439953260010321 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 MINOS1 ENSG00000270136;ENSG00000173436;ENSG00000270136 UTR5;UTR3 Human other chr1:19952908 chr1:19952903 . . 0 hm6A_associated_SNPs_2363 0 0 1 4 19952890 19952914 mRNA hsa-miR-876-5p C1orf151 miRanda miRanda
14034 chr1 19952903 19952903 1 + T A rs72959490 19952908 + 19952888 19952928 41 AGCAGTGACTTCACCTGAGAACATCCCAGCGGGAGGACAAG AGCAGTGACTTCACCAGAGAACATCCCAGCGGGAGGACAAG < 41bp 1 0.78002336999484 1 0.922468483448029 experiment 0.439953260010321 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 MINOS1 ENSG00000270136;ENSG00000173436;ENSG00000270136 UTR5;UTR3 Human other chr1:19952908 chr1:19952903 . . 0 hm6A_associated_SNPs_2363 0 0 1 4 19952896 19952914 mRNA hsa-miR-876-5p C1orf151 miRanda miRanda
14034 chr1 19952995 19952995 1 + A G rs144970794 19952992 + 19952972 19953012 41 TAAGCTGCCATTCTTCTGTAACAATGTTATCAGTAATGCTT TAAGCTGCCATTCTTCTGTAACAGTGTTATCAGTAATGCTT < 41bp 1 0.600465564257651 1 0.836466014385223 experiment 0.799068871484698 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 24 MINOS1 ENSG00000173436 UTR3 Human protein_coding chr1:19952992 chr1:19952995 . . 0 hm6A_associated_SNPs_2364 0 0 1 1 19952979 19953000 mRNA hsa-miR-543 C1orf151 miRanda miRanda
14034 chr1 22356809 22356809 1 + A G rs1063116 22356829 + 22356809 22356849 41 AGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTC GGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTC < 41bp 1 0.770520712875402 1 0.913995981216431 experiment 0.458958574249196 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 1 LINC00339 ENSG00000218510 ncRNA_exonic Human lincRNA chr1:22356829 chr1:22356809 . . 0 hm6A_associated_SNPs_2390 0 0 1 2 22356804 22356829 mRNA hsa-miR-330-5p HSPC157 miRanda miRanda
14034 chr1 22356809 22356809 1 + A G rs1063116 22356829 + 22356809 22356849 41 AGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTC GGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTC < 41bp 1 0.770520712875402 1 0.913995981216431 experiment 0.458958574249196 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 1 LINC00339 ENSG00000218510 ncRNA_exonic Human lincRNA chr1:22356829 chr1:22356809 . . 0 hm6A_associated_SNPs_2390 0 0 1 2 22356808 22356829 mRNA hsa-miR-326 HSPC157 miRanda miRanda
14034 chr1 22356849 22356849 1 + C T rs148259047 22356829 + 22356809 22356849 41 AGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTC AGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTT < 41bp 1 0.745215986231418 1 0.921888589859009 experiment 0.509568027537163 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 41 LINC00339 ENSG00000218510 ncRNA_exonic Human lincRNA chr1:22356829 chr1:22356849 . . 0 hm6A_associated_SNPs_2391 0 0 1 2 22356833 22356853 mRNA hsa-miR-378 HSPC157 miRanda miRanda
14034 chr1 22356849 22356849 1 + C T rs148259047 22356829 + 22356809 22356849 41 AGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTC AGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTT < 41bp 1 0.745215986231418 1 0.921888589859009 experiment 0.509568027537163 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 41 LINC00339 ENSG00000218510 ncRNA_exonic Human lincRNA chr1:22356829 chr1:22356849 . . 0 hm6A_associated_SNPs_2391 0 0 1 2 22356832 22356853 mRNA hsa-miR-422a HSPC157 miRanda miRanda
14034 chr1 22419366 22419366 1 + A G rs16826566 22419362 + 22419342 22419382 41 TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTC TGTAGATGCATTAGTGTTGAACCAGTGCTTTCTCATGTCTC < 41bp 1 0.193664606734515 1 0.000717043876647949 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22419362 chr1:22419366 . . 0 hm6A_associated_SNPs_2392 0 0 1 1 22419358 22419376 mRNA hsa-miR-539 CDC42 miRanda miRanda
14034 chr1 22419382 22419382 1 + C T rs542916407 22419362 + 22419342 22419382 41 TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTC TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTT < 41bp 1 0.222577342920384 1 0.000702798366546631 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22419362 chr1:22419382 . . 0 hm6A_associated_SNPs_2393 0 0 1 5 22419379 22419400 mRNA hsa-miR-153 CDC42 miRanda miRanda
14034 chr1 22419382 22419382 1 + C T rs542916407 22419362 + 22419342 22419382 41 TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTC TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTT < 41bp 1 0.222577342920384 1 0.000702798366546631 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22419362 chr1:22419382 . . 0 hm6A_associated_SNPs_2393 0 0 1 5 22419370 22419391 mRNA hsa-miR-186 CDC42 miRanda miRanda
14034 chr1 22419382 22419382 1 + C T rs542916407 22419362 + 22419342 22419382 41 TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTC TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTT < 41bp 1 0.222577342920384 1 0.000702798366546631 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22419362 chr1:22419382 . . 0 hm6A_associated_SNPs_2393 0 0 1 5 22419374 22419395 mRNA hsa-miR-381 CDC42 miRanda miRanda
14034 chr1 22419382 22419382 1 + C T rs542916407 22419362 + 22419342 22419382 41 TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTC TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTT < 41bp 1 0.222577342920384 1 0.000702798366546631 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22419362 chr1:22419382 . . 0 hm6A_associated_SNPs_2393 0 0 1 5 22419377 22419400 mRNA hsa-miR-448 CDC42 miRanda miRanda
14034 chr1 22419382 22419382 1 + C T rs542916407 22419362 + 22419342 22419382 41 TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTC TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTT < 41bp 1 0.222577342920384 1 0.000702798366546631 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22419362 chr1:22419382 . . 0 hm6A_associated_SNPs_2393 0 0 1 5 22419374 22419395 mRNA hsa-miR-300 CDC42 miRanda miRanda
14034 chr1 23410025 23410025 1 + C G rs138050534 23410023 + 23410003 23410043 41 GAGCTTGCCTCCTTTGAATGACCTAGAGCACAGGGAGGAAC GAGCTTGCCTCCTTTGAATGACGTAGAGCACAGGGAGGAAC Direct Loss 1 0.708432941522557 1 0.744703114032745 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 KDM1A ENSG00000240553 ncRNA_intronic Human antisense chr1:23410023 chr1:23410025 . . 0 hm6A_associated_SNPs_2407 0 0 1 1 23410012 23410036 mRNA hsa-miR-149 KDM1A miRanda miRanda
14034 chr1 23410025 23410025 1 + C G rs138050534 23410042 + 23410022 23410062 41 GACCTAGAGCACAGGGAGGAACTTGTCCATTAGTTTGGAAT GACGTAGAGCACAGGGAGGAACTTGTCCATTAGTTTGGAAT < 41bp 1 0.628700625398841 1 0.820476472377777 experiment 0.742598749202319 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 4 KDM1A ENSG00000240553 ncRNA_intronic Human antisense chr1:23410042 chr1:23410025 . . 0 hm6A_associated_SNPs_2408 0 0 1 1 23410012 23410036 mRNA hsa-miR-149 KDM1A miRanda miRanda
14034 chr1 24114333 24114333 1 + C T rs151013566 24114323 + 24114303 24114343 41 CAGGAGGGTCTCCAACTAAAACACTTGTTCCTGCTTGCTCC CAGGAGGGTCTCCAACTAAAACACTTGTTCTTGCTTGCTCC < 41bp 1 0.754852314658744 1 0.0186454653739929 experiment 0.490295370682512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 31 PITHD1 ENSG00000057757 UTR3 Human protein_coding chr1:24114323 chr1:24114333 . . 0 hm6A_associated_SNPs_2420 0 0 1 1 24114316 24114336 mRNA hsa-miR-873 C1orf128 miRanda miRanda
14034 chr1 25168518 25168518 1 + G T rs76330923 25168512 + 25168492 25168532 41 CTATATAAAAGAAAGATAAAACACAGGTCACCAATTTTCTC CTATATAAAAGAAAGATAAAACACAGTTCACCAATTTTCTC < 41bp 1 0.135701306268246 1 0.00350058078765869 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control 27 CLIC4 ENSG00000169504 UTR3 Human protein_coding chr1:25168512 chr1:25168518 . . 0 hm6A_associated_SNPs_2430 0 0 1 1 25168518 25168539 mRNA hsa-miR-203 CLIC4 miRanda miRanda
14034 chr1 25170203 25170203 1 + A G rs190120249 25170223 + 25170203 25170243 41 ATACAATTAAGAGATTTCTGACATTTATTCTTACACTAAAT GTACAATTAAGAGATTTCTGACATTTATTCTTACACTAAAT < 41bp 1 0.280099470116499 1 0.117115944623947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 CLIC4 ENSG00000169504 UTR3 Human protein_coding chr1:25170223 chr1:25170203 . . 0 hm6A_associated_SNPs_2433 0 0 1 2 25170184 25170206 mRNA hsa-miR-361-5p CLIC4 miRanda miRanda
14034 chr1 25170203 25170203 1 + A G rs190120249 25170223 + 25170203 25170243 41 ATACAATTAAGAGATTTCTGACATTTATTCTTACACTAAAT GTACAATTAAGAGATTTCTGACATTTATTCTTACACTAAAT < 41bp 1 0.280099470116499 1 0.117115944623947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 CLIC4 ENSG00000169504 UTR3 Human protein_coding chr1:25170223 chr1:25170203 . . 0 hm6A_associated_SNPs_2433 0 0 1 2 25170198 25170219 mRNA hsa-miR-216b CLIC4 miRanda miRanda
14034 chr1 25664944 25664944 1 + G A rs187950680 25664925 + 25664905 25664945 41 GCGCGACACCGGGCTCCGGAACCACTGCACGACGGGGCTGG GCGCGACACCGGGCTCCGGAACCACTGCACGACGGGGCTAG < 41bp 1 0.575861343164965 1 0.899092078208923 experiment 0.848277313670071 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 TMEM50A ENSG00000183726 UTR5 Human protein_coding chr1:25664925 chr1:25664944 . . 0 hm6A_associated_SNPs_2436 0 0 1 1 25664938 25664947 mRNA hsa-miR-217 TMEM50A miRanda miRanda
14034 chr1 25687937 25687937 1 + C G rs75991893 25687932 + 25687912 25687952 41 GAAAAAAGGGCAGAGACTTGACACTCCAGTCTTAGACAGGG GAAAAAAGGGCAGAGACTTGACACTGCAGTCTTAGACAGGG < 41bp 1 0.677254189810079 1 0.53910356760025 experiment 0.645491620379841 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25687932 chr1:25687937 . . 0 hm6A_associated_SNPs_2437 0 0 1 2 25687918 25687939 mRNA hsa-miR-122 TMEM50A miRanda miRanda
14034 chr1 25687937 25687937 1 + C G rs75991893 25687932 + 25687912 25687952 41 GAAAAAAGGGCAGAGACTTGACACTCCAGTCTTAGACAGGG GAAAAAAGGGCAGAGACTTGACACTGCAGTCTTAGACAGGG < 41bp 1 0.677254189810079 1 0.53910356760025 experiment 0.645491620379841 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25687932 chr1:25687937 . . 0 hm6A_associated_SNPs_2437 0 0 1 2 25687928 25687953 mRNA hsa-miR-339-5p TMEM50A miRanda miRanda
14034 chr1 25688276 25688276 1 + A G rs9689 25688265 + 25688245 25688285 41 ATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATA ATGCTAGCCATGGTCATCTGACAGTCTCTACGCTGTGAATA < 41bp 1 0.747685206612994 1 0.637204170227051 experiment 0.504629586774011 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 32 TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25688265 chr1:25688276 . . 0 hm6A_associated_SNPs_2440 0 0 1 3 25688263 25688283 mRNA hsa-miR-27a TMEM50A miRanda miRanda
14034 chr1 25688276 25688276 1 + A G rs9689 25688265 + 25688245 25688285 41 ATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATA ATGCTAGCCATGGTCATCTGACAGTCTCTACGCTGTGAATA < 41bp 1 0.747685206612994 1 0.637204170227051 experiment 0.504629586774011 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 32 TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25688265 chr1:25688276 . . 0 hm6A_associated_SNPs_2440 0 0 1 3 25688263 25688283 mRNA hsa-miR-27b TMEM50A miRanda miRanda
14034 chr1 25688276 25688276 1 + A G rs9689 25688265 + 25688245 25688285 41 ATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATA ATGCTAGCCATGGTCATCTGACAGTCTCTACGCTGTGAATA < 41bp 1 0.747685206612994 1 0.637204170227051 experiment 0.504629586774011 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 32 TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25688265 chr1:25688276 . . 0 hm6A_associated_SNPs_2440 0 0 1 3 25688261 25688282 mRNA hsa-miR-128 TMEM50A miRanda miRanda
14034 chr1 25825884 25825884 1 + T G rs74063427 25825896 + 25825876 25825916 41 GCAGTGTTTGTGGACGAGAGACTGTAACGATGGCTAATAAA GCAGTGTTGGTGGACGAGAGACTGTAACGATGGCTAATAAA < 41bp 1 0.179774712905536 1 0.962011992931366 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 TMEM57 ENSG00000204178 UTR3 Human protein_coding chr1:25825896 chr1:25825884 . . 0 hm6A_associated_SNPs_2443 0 0 1 1 25825883 25825907 mRNA hsa-miR-487b TMEM57 miRanda miRanda
14034 chr1 25825903 25825903 1 + C T rs568337277 25825896 + 25825876 25825916 41 GCAGTGTTTGTGGACGAGAGACTGTAACGATGGCTAATAAA GCAGTGTTTGTGGACGAGAGACTGTAATGATGGCTAATAAA < 41bp 1 0.172047661712796 1 0.959447503089905 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 TMEM57 ENSG00000204178 UTR3 Human protein_coding chr1:25825896 chr1:25825903 . . 0 hm6A_associated_SNPs_2444 0 0 1 1 25825883 25825907 mRNA hsa-miR-487b TMEM57 miRanda miRanda
14034 chr1 25894079 25894079 1 + C T rs117614534 25894071 + 25894051 25894091 41 AGACTAAGGGGCAGCTCCTGACCAAAGACGATACAGCTTGG AGACTAAGGGGCAGCTCCTGACCAAAGATGATACAGCTTGG < 41bp 1 0.725201872614442 1 0.594577372074127 experiment 0.549596254771117 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894071 chr1:25894079 . . 0 hm6A_associated_SNPs_2445 0 0 1 7 25894075 25894098 mRNA hsa-miR-17 LDLRAP1 miRanda miRanda
14034 chr1 25894079 25894079 1 + C T rs117614534 25894071 + 25894051 25894091 41 AGACTAAGGGGCAGCTCCTGACCAAAGACGATACAGCTTGG AGACTAAGGGGCAGCTCCTGACCAAAGATGATACAGCTTGG < 41bp 1 0.725201872614442 1 0.594577372074127 experiment 0.549596254771117 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894071 chr1:25894079 . . 0 hm6A_associated_SNPs_2445 0 0 1 7 25894076 25894098 mRNA hsa-miR-20a LDLRAP1 miRanda miRanda
14034 chr1 25894079 25894079 1 + C T rs117614534 25894071 + 25894051 25894091 41 AGACTAAGGGGCAGCTCCTGACCAAAGACGATACAGCTTGG AGACTAAGGGGCAGCTCCTGACCAAAGATGATACAGCTTGG < 41bp 1 0.725201872614442 1 0.594577372074127 experiment 0.549596254771117 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894071 chr1:25894079 . . 0 hm6A_associated_SNPs_2445 0 0 1 7 25894077 25894098 mRNA hsa-miR-93 LDLRAP1 miRanda miRanda
14034 chr1 25894079 25894079 1 + C T rs117614534 25894071 + 25894051 25894091 41 AGACTAAGGGGCAGCTCCTGACCAAAGACGATACAGCTTGG AGACTAAGGGGCAGCTCCTGACCAAAGATGATACAGCTTGG < 41bp 1 0.725201872614442 1 0.594577372074127 experiment 0.549596254771117 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894071 chr1:25894079 . . 0 hm6A_associated_SNPs_2445 0 0 1 7 25894075 25894098 mRNA hsa-miR-106a LDLRAP1 miRanda miRanda
14034 chr1 25894079 25894079 1 + C T rs117614534 25894071 + 25894051 25894091 41 AGACTAAGGGGCAGCTCCTGACCAAAGACGATACAGCTTGG AGACTAAGGGGCAGCTCCTGACCAAAGATGATACAGCTTGG < 41bp 1 0.725201872614442 1 0.594577372074127 experiment 0.549596254771117 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894071 chr1:25894079 . . 0 hm6A_associated_SNPs_2445 0 0 1 7 25894077 25894098 mRNA hsa-miR-106b LDLRAP1 miRanda miRanda
14034 chr1 25894079 25894079 1 + C T rs117614534 25894071 + 25894051 25894091 41 AGACTAAGGGGCAGCTCCTGACCAAAGACGATACAGCTTGG AGACTAAGGGGCAGCTCCTGACCAAAGATGATACAGCTTGG < 41bp 1 0.725201872614442 1 0.594577372074127 experiment 0.549596254771117 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894071 chr1:25894079 . . 0 hm6A_associated_SNPs_2445 0 0 1 7 25894077 25894098 mRNA hsa-miR-20b LDLRAP1 miRanda miRanda
14034 chr1 25894079 25894079 1 + C T rs117614534 25894071 + 25894051 25894091 41 AGACTAAGGGGCAGCTCCTGACCAAAGACGATACAGCTTGG AGACTAAGGGGCAGCTCCTGACCAAAGATGATACAGCTTGG < 41bp 1 0.725201872614442 1 0.594577372074127 experiment 0.549596254771117 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894071 chr1:25894079 . . 0 hm6A_associated_SNPs_2445 0 0 1 7 25894077 25894098 mRNA hsa-miR-519d LDLRAP1 miRanda miRanda
14034 chr1 26497340 26497340 1 + A C rs8768 26497350 + 26497330 26497370 41 GCCCTGCCCCAAATAAAGGAACTGGACAAAGAGAACTTGCC GCCCTGCCCCCAATAAAGGAACTGGACAAAGAGAACTTGCC < 41bp 1 0.49001359044244 1 0.975371360778809 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 11 ZNF593 ENSG00000236782 ncRNA_intronic Human protein_coding chr1:26497350 chr1:26497340 . . 0 hm6A_associated_SNPs_2460 0 0 1 1 26497334 26497356 mRNA hsa-miR-145 ZNF593 miRanda miRanda
14034 chr1 26497340 26497340 1 + A C rs8768 26497355 + 26497335 26497375 41 GCCCCAAATAAAGGAACTGGACAAAGAGAACTTGCCTCCAA GCCCCCAATAAAGGAACTGGACAAAGAGAACTTGCCTCCAA < 41bp 1 0.504070471386153 1 0.979672491550446 experiment 0.991859057227693 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 6 ZNF593 ENSG00000236782 ncRNA_intronic Human protein_coding chr1:26497355 chr1:26497340 . . 0 hm6A_associated_SNPs_2461 0 0 1 1 26497334 26497356 mRNA hsa-miR-145 ZNF593 miRanda miRanda
14034 chr1 26802857 26802857 1 + C T rs143924126 26802856 + 26802836 26802876 41 TAAAATTAGCAAATTAATAGACTCATGTCAGAGAGTGTCTC TAAAATTAGCAAATTAATAGATTCATGTCAGAGAGTGTCTC Direct Loss 1 0.0762332628555974 1 0.0136869549751282 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 HMGN2 ENSG00000198830 downstream Human protein_coding chr1:26802856 chr1:26802857 . . 0 hm6A_associated_SNPs_2476 0 0 1 1 26802855 26802877 mRNA hsa-miR-146a HMGN2 miRanda miRanda
14034 chr1 26900735 26900735 1 + C G rs282179 26900732 + 26900712 26900752 41 CACAGGGCGGTGCTAGCTTGACACAGTCAGCATGCTTCCCA CACAGGGCGGTGCTAGCTTGACAGAGTCAGCATGCTTCCCA < 41bp 1 0.757704421800114 1 0.845227777957916 experiment 0.484591156399772 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 24 RPS6KA1 ENSG00000117676 UTR3 Human protein_coding chr1:26900732 chr1:26900735 . . 0 hm6A_associated_SNPs_2477 0 0 0 1 26900731 26900756 mRNA hsa-miR-330-5p RPS6KA1 miRanda miRanda
14034 chr1 26901189 26901189 1 + A G rs41303625 26901173 + 26901153 26901193 41 GCATCTGGCTGTTTAGCAGAACTCATTCTATCCCCAATCAG GCATCTGGCTGTTTAGCAGAACTCATTCTATCCCCAGTCAG < 41bp 1 0.780444589637181 1 0.858216464519501 experiment 0.439110820725638 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 RPS6KA1 ENSG00000117676 UTR3 Human protein_coding chr1:26901173 chr1:26901189 . . 0 hm6A_associated_SNPs_2482 0 0 1 2 26901178 26901199 mRNA hsa-miR-28-5p RPS6KA1 miRanda miRanda
14034 chr1 26901189 26901189 1 + A G rs41303625 26901173 + 26901153 26901193 41 GCATCTGGCTGTTTAGCAGAACTCATTCTATCCCCAATCAG GCATCTGGCTGTTTAGCAGAACTCATTCTATCCCCAGTCAG < 41bp 1 0.780444589637181 1 0.858216464519501 experiment 0.439110820725638 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 RPS6KA1 ENSG00000117676 UTR3 Human protein_coding chr1:26901173 chr1:26901189 . . 0 hm6A_associated_SNPs_2482 0 0 1 2 26901177 26901199 mRNA hsa-miR-708 RPS6KA1 miRanda miRanda
14034 chr1 27107695 27107695 1 + A G rs192390664 27107702 + 27107682 27107722 41 TCTGAAGGACAAAAAAGGTGACTGCTGAACTGTGTGTGGTT TCTGAAGGACAAAGAAGGTGACTGCTGAACTGTGTGTGGTT < 41bp 1 0.557260430084368 1 0.976007223129272 experiment 0.885479139831263 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 ARID1A ENSG00000117713 UTR3 Human protein_coding chr1:27107702 chr1:27107695 . . 0 hm6A_associated_SNPs_2490 0 0 1 2 27107681 27107703 mRNA hsa-miR-204 ARID1A miRanda miRanda
14034 chr1 27107695 27107695 1 + A G rs192390664 27107702 + 27107682 27107722 41 TCTGAAGGACAAAAAAGGTGACTGCTGAACTGTGTGTGGTT TCTGAAGGACAAAGAAGGTGACTGCTGAACTGTGTGTGGTT < 41bp 1 0.557260430084368 1 0.976007223129272 experiment 0.885479139831263 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 ARID1A ENSG00000117713 UTR3 Human protein_coding chr1:27107702 chr1:27107695 . . 0 hm6A_associated_SNPs_2490 0 0 1 2 27107681 27107703 mRNA hsa-miR-211 ARID1A miRanda miRanda
14034 chr1 27107695 27107695 1 + A G rs192390664 27107710 + 27107690 27107730 41 ACAAAAAAGGTGACTGCTGAACTGTGTGTGGTTTATTGTTG ACAAAGAAGGTGACTGCTGAACTGTGTGTGGTTTATTGTTG < 41bp 1 0.646813080857981 1 0.984390377998352 experiment 0.706373838284038 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 ARID1A ENSG00000117713 UTR3 Human protein_coding chr1:27107710 chr1:27107695 . . 0 hm6A_associated_SNPs_2491 0 0 1 2 27107681 27107703 mRNA hsa-miR-204 ARID1A miRanda miRanda
14034 chr1 27107695 27107695 1 + A G rs192390664 27107710 + 27107690 27107730 41 ACAAAAAAGGTGACTGCTGAACTGTGTGTGGTTTATTGTTG ACAAAGAAGGTGACTGCTGAACTGTGTGTGGTTTATTGTTG < 41bp 1 0.646813080857981 1 0.984390377998352 experiment 0.706373838284038 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 ARID1A ENSG00000117713 UTR3 Human protein_coding chr1:27107710 chr1:27107695 . . 0 hm6A_associated_SNPs_2491 0 0 1 2 27107681 27107703 mRNA hsa-miR-211 ARID1A miRanda miRanda
14034 chr1 28087863 28087863 1 + G A rs183656211 28087851 + 28087831 28087871 41 GTTACCTTGGAGTCTTAAAAACTGATTGCTAAGGTGAAACA GTTACCTTGGAGTCTTAAAAACTGATTGCTAAAGTGAAACA < 41bp 1 0.105336512292433 1 0.91123354434967 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 FAM76A ENSG00000009780 UTR3 Human protein_coding chr1:28087851 chr1:28087863 . . 0 hm6A_associated_SNPs_2505 0 0 1 2 28087860 28087882 mRNA hsa-miR-33a FAM76A miRanda miRanda
14034 chr1 28087863 28087863 1 + G A rs183656211 28087851 + 28087831 28087871 41 GTTACCTTGGAGTCTTAAAAACTGATTGCTAAGGTGAAACA GTTACCTTGGAGTCTTAAAAACTGATTGCTAAAGTGAAACA < 41bp 1 0.105336512292433 1 0.91123354434967 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 FAM76A ENSG00000009780 UTR3 Human protein_coding chr1:28087851 chr1:28087863 . . 0 hm6A_associated_SNPs_2505 0 0 1 2 28087861 28087882 mRNA hsa-miR-33b FAM76A miRanda miRanda
14034 chr1 28087863 28087863 1 + G A rs183656211 28087869 + 28087849 28087889 41 AAACTGATTGCTAAGGTGAAACAATTCAATGCATAAGTATG AAACTGATTGCTAAAGTGAAACAATTCAATGCATAAGTATG < 41bp 1 0.227973681590746 1 0.59236216545105 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 FAM76A ENSG00000009780 UTR3 Human protein_coding chr1:28087869 chr1:28087863 . . 0 hm6A_associated_SNPs_2506 0 0 1 2 28087860 28087882 mRNA hsa-miR-33a FAM76A miRanda miRanda
14034 chr1 28087863 28087863 1 + G A rs183656211 28087869 + 28087849 28087889 41 AAACTGATTGCTAAGGTGAAACAATTCAATGCATAAGTATG AAACTGATTGCTAAAGTGAAACAATTCAATGCATAAGTATG < 41bp 1 0.227973681590746 1 0.59236216545105 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 FAM76A ENSG00000009780 UTR3 Human protein_coding chr1:28087869 chr1:28087863 . . 0 hm6A_associated_SNPs_2506 0 0 1 2 28087861 28087882 mRNA hsa-miR-33b FAM76A miRanda miRanda
14034 chr1 28089067 28089067 1 + A G rs77933424 28089083 + 28089063 28089103 41 TCTGATAAGGGATACAGTGGACCATGTCGCTTATATATCAC TCTGGTAAGGGATACAGTGGACCATGTCGCTTATATATCAC < 41bp 1 0.0536476179453753 1 0.0879812240600586 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 FAM76A ENSG00000009780 UTR3 Human protein_coding chr1:28089083 chr1:28089067 . . 0 hm6A_associated_SNPs_2507 0 0 1 1 28089049 28089070 mRNA hsa-miR-361-5p FAM76A miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7a XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7b XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7c XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7d XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7e XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7f XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294036 28294057 mRNA hsa-miR-98 XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7g XKR8 miRanda miRanda
14034 chr1 28294051 28294051 1 + T C rs4243821 28294064 + 28294044 28294084 41 CCCTGGCTACCTCTAAAATGACTGGTATAGGTGCTGCCCCA CCCTGGCCACCTCTAAAATGACTGGTATAGGTGCTGCCCCA < 41bp 1 0.407523705625499 1 0.954952597618103 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 XKR8 ENSG00000158156 UTR3 Human protein_coding chr1:28294064 chr1:28294051 . . 0 hm6A_associated_SNPs_2514 0 0 0 9 28294035 28294057 mRNA hsa-let-7i XKR8 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608584 28608604 mRNA hsa-miR-17 SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608584 28608604 mRNA hsa-miR-20a SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608584 28608604 mRNA hsa-miR-93 SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608584 28608604 mRNA hsa-miR-106a SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608588 28608611 mRNA hsa-miR-221 SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608591 28608611 mRNA hsa-miR-222 SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608584 28608604 mRNA hsa-miR-106b SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608584 28608604 mRNA hsa-miR-20b SESN2 miRanda miRanda
14034 chr1 28608594 28608594 1 + C T rs113975812 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCTAGGCACTTTCTG < 41bp 1 0.41043122631505 1 0.945159733295441 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608594 . . 0 hm6A_associated_SNPs_2526 0 0 1 9 28608583 28608604 mRNA hsa-miR-519d SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608584 28608604 mRNA hsa-miR-17 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608584 28608604 mRNA hsa-miR-20a SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608584 28608604 mRNA hsa-miR-93 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608584 28608604 mRNA hsa-miR-106a SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608588 28608611 mRNA hsa-miR-221 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608591 28608611 mRNA hsa-miR-222 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608584 28608604 mRNA hsa-miR-106b SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608584 28608604 mRNA hsa-miR-20b SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608586 + 28608566 28608606 41 CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTG CCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCATTTTCTG < 41bp 1 0.448701530645116 1 0.953782677650452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608586 chr1:28608600 . . 0 hm6A_associated_SNPs_2527 0 0 1 9 28608583 28608604 mRNA hsa-miR-519d SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608584 28608604 mRNA hsa-miR-17 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608584 28608604 mRNA hsa-miR-20a SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608584 28608604 mRNA hsa-miR-93 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608584 28608604 mRNA hsa-miR-106a SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608588 28608611 mRNA hsa-miR-221 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608591 28608611 mRNA hsa-miR-222 SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608584 28608604 mRNA hsa-miR-106b SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608584 28608604 mRNA hsa-miR-20b SESN2 miRanda miRanda
14034 chr1 28608600 28608600 1 + C T rs148860823 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCATTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT < 41bp 1 0.598273115098987 1 0.953829348087311 experiment 0.803453769802025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608600 . . 0 hm6A_associated_SNPs_2528 0 0 1 9 28608583 28608604 mRNA hsa-miR-519d SESN2 miRanda miRanda
14034 chr1 28608628 28608628 1 + G A rs116651280 28608616 + 28608596 28608636 41 GGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCT GGCACTTTCTGTAGCAAATGACTGTGAATTACAACTTCTCT < 41bp 1 0.539075160289299 1 0.957024455070496 experiment 0.921849679421402 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608616 chr1:28608628 . . 0 hm6A_associated_SNPs_2529 0 0 1 1 28608622 28608641 mRNA hsa-miR-31 SESN2 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823125 28823145 mRNA hsa-miR-302a PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823125 28823145 mRNA hsa-miR-302b PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823125 28823145 mRNA hsa-miR-302c PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823125 28823145 mRNA hsa-miR-302d PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823123 28823145 mRNA hsa-miR-372 PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823123 28823145 mRNA hsa-miR-373 PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823125 28823145 mRNA hsa-miR-520e PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823119 28823145 mRNA hsa-miR-520a-3p PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823120 28823145 mRNA hsa-miR-520b PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823119 28823145 mRNA hsa-miR-520c-3p PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823118 28823145 mRNA hsa-miR-520d-3p PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823120 + 28823100 28823140 41 CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGC CTGCTTCCTTCTCCAAAGTGACATATGGAGGGAAATTTAGC < 41bp 1 0.706475544823896 1 0.014262467622757 experiment 0.587048910352208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823120 chr1:28823134 . . 0 hm6A_associated_SNPs_2531 0 0 1 12 28823129 28823145 mRNA hsa-miR-302e PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823125 28823145 mRNA hsa-miR-302a PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823125 28823145 mRNA hsa-miR-302b PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823125 28823145 mRNA hsa-miR-302c PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823125 28823145 mRNA hsa-miR-302d PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823123 28823145 mRNA hsa-miR-372 PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823123 28823145 mRNA hsa-miR-373 PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823125 28823145 mRNA hsa-miR-520e PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823119 28823145 mRNA hsa-miR-520a-3p PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823120 28823145 mRNA hsa-miR-520b PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823119 28823145 mRNA hsa-miR-520c-3p PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823118 28823145 mRNA hsa-miR-520d-3p PHACTR4 miRanda miRanda
14034 chr1 28823134 28823134 1 + C A rs543390312 28823133 + 28823113 28823153 41 CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACA CAAAGTGACATATGGAGGGAAATTTAGCACTTCCCAGCACA Direct Loss 1 0.640418226069761 1 0.0124083161354065 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823133 chr1:28823134 . . 0 hm6A_associated_SNPs_2532 0 0 1 12 28823129 28823145 mRNA hsa-miR-302e PHACTR4 miRanda miRanda
14034 chr1 28823395 28823395 1 + G A rs568048554 28823388 + 28823368 28823408 41 CACACCCCTTCCCCTAGATGACTGCCTGTGCAGAGACACAG CACACCCCTTCCCCTAGATGACTGCCTATGCAGAGACACAG < 41bp 1 0.510398059610933 1 0.417436838150024 experiment 0.979203880778134 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823388 chr1:28823395 . . 0 hm6A_associated_SNPs_2533 0 0 1 3 28823389 28823416 mRNA hsa-miR-19a PHACTR4 miRanda miRanda
14034 chr1 28823395 28823395 1 + G A rs568048554 28823388 + 28823368 28823408 41 CACACCCCTTCCCCTAGATGACTGCCTGTGCAGAGACACAG CACACCCCTTCCCCTAGATGACTGCCTATGCAGAGACACAG < 41bp 1 0.510398059610933 1 0.417436838150024 experiment 0.979203880778134 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823388 chr1:28823395 . . 0 hm6A_associated_SNPs_2533 0 0 1 3 28823394 28823416 mRNA hsa-miR-19b PHACTR4 miRanda miRanda
14034 chr1 28823395 28823395 1 + G A rs568048554 28823388 + 28823368 28823408 41 CACACCCCTTCCCCTAGATGACTGCCTGTGCAGAGACACAG CACACCCCTTCCCCTAGATGACTGCCTATGCAGAGACACAG < 41bp 1 0.510398059610933 1 0.417436838150024 experiment 0.979203880778134 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28823388 chr1:28823395 . . 0 hm6A_associated_SNPs_2533 0 0 1 3 28823382 28823405 mRNA hsa-miR-431 PHACTR4 miRanda miRanda
14034 chr1 28826321 28826321 1 + G A rs143257742 28826334 + 28826314 28826354 41 TAACTGAGGGAAGAGAAGTGACAATTCCACTCAGTCTATTA TAACTGAAGGAAGAGAAGTGACAATTCCACTCAGTCTATTA < 41bp 1 0.261264449301314 1 0.0813789367675781 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28826334 chr1:28826321 . . 0 hm6A_associated_SNPs_2536 0 0 1 2 28826317 28826339 mRNA hsa-miR-25 PHACTR4 miRanda miRanda
14034 chr1 28826321 28826321 1 + G A rs143257742 28826334 + 28826314 28826354 41 TAACTGAGGGAAGAGAAGTGACAATTCCACTCAGTCTATTA TAACTGAAGGAAGAGAAGTGACAATTCCACTCAGTCTATTA < 41bp 1 0.261264449301314 1 0.0813789367675781 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 PHACTR4 ENSG00000204138 UTR3 Human protein_coding chr1:28826334 chr1:28826321 . . 0 hm6A_associated_SNPs_2536 0 0 1 2 28826317 28826339 mRNA hsa-miR-92a PHACTR4 miRanda miRanda
14034 chr1 28904163 28904163 1 + A T rs141370554 28904161 + 28904141 28904181 41 TGATGTAGCCAGGCCAAAGGACAAGCCAGGTTGCATGATGT TGATGTAGCCAGGCCAAAGGACTAGCCAGGTTGCATGATGT < 41bp 1 0.744547498084433 1 0.927504420280457 experiment 0.510905003831134 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 23 TRNAU1AP ENSG00000180098 UTR3 Human protein_coding chr1:28904161 chr1:28904163 . . 0 hm6A_associated_SNPs_2548 0 0 1 1 28904152 28904173 mRNA hsa-miR-490-3p TRNAU1AP miRanda miRanda
14034 chr1 28904164 28904164 1 + A G rs145215228 28904161 + 28904141 28904181 41 TGATGTAGCCAGGCCAAAGGACAAGCCAGGTTGCATGATGT TGATGTAGCCAGGCCAAAGGACAGGCCAGGTTGCATGATGT < 41bp 1 0.700894464244653 1 0.855487704277039 experiment 0.598211071510693 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 TRNAU1AP ENSG00000180098 UTR3 Human protein_coding chr1:28904161 chr1:28904164 . . 0 hm6A_associated_SNPs_2549 0 0 1 1 28904152 28904173 mRNA hsa-miR-490-3p TRNAU1AP miRanda miRanda
14034 chr1 29095950 29095950 1 + A C rs180728450 29095936 + 29095916 29095956 41 TATCCTTCCGAACTGGAAGAACATTTTTATGAAGAATTTTT TATCCTTCCGAACTGGAAGAACATTTTTATGAAGCATTTTT < 41bp 1 0.656968057693695 1 0.961180925369263 experiment 0.68606388461261 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 YTHDF2 ENSG00000198492 UTR3 Human protein_coding chr1:29095936 chr1:29095950 . . 0 hm6A_associated_SNPs_2553 0 0 1 2 29095930 29095951 mRNA hsa-miR-205 YTHDF2 miRanda miRanda
14034 chr1 29095950 29095950 1 + A C rs180728450 29095936 + 29095916 29095956 41 TATCCTTCCGAACTGGAAGAACATTTTTATGAAGAATTTTT TATCCTTCCGAACTGGAAGAACATTTTTATGAAGCATTTTT < 41bp 1 0.656968057693695 1 0.961180925369263 experiment 0.68606388461261 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 YTHDF2 ENSG00000198492 UTR3 Human protein_coding chr1:29095936 chr1:29095950 . . 0 hm6A_associated_SNPs_2553 0 0 1 2 29095943 29095966 mRNA hsa-miR-384 YTHDF2 miRanda miRanda
14034 chr1 29444193 29444193 1 + G A rs373427279 29444184 + 29444164 29444204 41 GGGCCAAAAGCTCTAATGGAACATTTTTAGTGGTGATTTGG GGGCCAAAAGCTCTAATGGAACATTTTTAATGGTGATTTGG < 41bp 1 0.665007006078173 1 0.824285089969635 experiment 0.669985987843654 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 EPB41 ENSG00000159023 UTR3 Human protein_coding chr1:29444184 chr1:29444193 . . 0 hm6A_associated_SNPs_2562 0 0 1 1 29444179 29444200 mRNA hsa-miR-197 EPB41 miRanda miRanda
14034 chr1 31837089 31837089 1 + T C rs12139997 31837078 + 31837058 31837098 41 GGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGA GGGGTGGTTGAGAGTAAGAAACCAGGAGCCTCGTGCCTTGA < 41bp 1 0.245381304556998 1 0.9411461353302 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 ZCCHC17 ENSG00000121766 UTR3 Human protein_coding chr1:31837078 chr1:31837089 . . 0 hm6A_associated_SNPs_2573 0 0 1 2 31837078 31837097 mRNA hsa-miR-124 ZCCHC17 miRanda miRanda
14034 chr1 31837089 31837089 1 + T C rs12139997 31837078 + 31837058 31837098 41 GGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGA GGGGTGGTTGAGAGTAAGAAACCAGGAGCCTCGTGCCTTGA < 41bp 1 0.245381304556998 1 0.9411461353302 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 ZCCHC17 ENSG00000121766 UTR3 Human protein_coding chr1:31837078 chr1:31837089 . . 0 hm6A_associated_SNPs_2573 0 0 1 2 31837075 31837097 mRNA hsa-miR-506 ZCCHC17 miRanda miRanda
14034 chr1 31837089 31837089 1 + T C rs12139997 31837100 + 31837080 31837120 41 CAGGAGCCTTGTGCCTTGAGACTCCTGGAAAGACTCAATAG CAGGAGCCTCGTGCCTTGAGACTCCTGGAAAGACTCAATAG < 41bp 1 0.620485791958354 1 0.892485499382019 experiment 0.759028416083291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 ZCCHC17 ENSG00000121766 UTR3 Human protein_coding chr1:31837100 chr1:31837089 . . 0 hm6A_associated_SNPs_2574 0 0 1 2 31837078 31837097 mRNA hsa-miR-124 ZCCHC17 miRanda miRanda
14034 chr1 31837089 31837089 1 + T C rs12139997 31837100 + 31837080 31837120 41 CAGGAGCCTTGTGCCTTGAGACTCCTGGAAAGACTCAATAG CAGGAGCCTCGTGCCTTGAGACTCCTGGAAAGACTCAATAG < 41bp 1 0.620485791958354 1 0.892485499382019 experiment 0.759028416083291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 ZCCHC17 ENSG00000121766 UTR3 Human protein_coding chr1:31837100 chr1:31837089 . . 0 hm6A_associated_SNPs_2574 0 0 1 2 31837075 31837097 mRNA hsa-miR-506 ZCCHC17 miRanda miRanda
14034 chr1 32508892 32508892 1 + A C rs186465477 32508894 + 32508874 32508914 41 TAATTGATATAAAAAAAAAAACAACAAAATTAGGCTTGTAA TAATTGATATAAAAAAAACAACAACAAAATTAGGCTTGTAA Direct Loss 1 0.565338693515092 1 0.0403715968132019 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 KHDRBS1 ENSG00000121774 UTR3 Human protein_coding chr1:32508894 chr1:32508892 . . 0 hm6A_associated_SNPs_2584 0 0 1 1 32508885 32508905 mRNA hsa-miR-590-3p KHDRBS1 miRanda miRanda
14034 chr1 32697063 32697063 1 + T C rs1137921 32697083 + 32697063 32697103 41 TCCTGAGCCACAAGAGCAAAACTCCGTCTCAAAAAAAAAAA CCCTGAGCCACAAGAGCAAAACTCCGTCTCAAAAAAAAAAA < 41bp 1 0.217877564662053 1 0.768589913845062 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 EIF3I ENSG00000084623 UTR3 Human protein_coding chr1:32697083 chr1:32697063 . . 0 hm6A_associated_SNPs_2600 0 0 1 1 32697051 32697072 mRNA hsa-miR-24 EIF3I miRanda miRanda
14034 chr1 32697071 32697071 1 + C A rs1137947 32697083 + 32697063 32697103 41 TCCTGAGCCACAAGAGCAAAACTCCGTCTCAAAAAAAAAAA TCCTGAGCAACAAGAGCAAAACTCCGTCTCAAAAAAAAAAA < 41bp 1 0.214903937847631 1 0.840837955474854 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 EIF3I ENSG00000084623 UTR3 Human protein_coding chr1:32697083 chr1:32697071 . . 0 hm6A_associated_SNPs_2601 0 0 1 1 32697051 32697072 mRNA hsa-miR-24 EIF3I miRanda miRanda
14034 chr1 33147143 33147143 1 - C T rs360510 33147126 - 33147106 33147146 41 AGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA AGTAAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA < 41bp 1 0.793524248157538 1 0.575097799301147 experiment 0.412951503684923 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 RBBP4;SYNC ENSG00000162520;ENSG00000162521 UTR3 Human other chr1:33147126 chr1:33147143 . . 0 hm6A_associated_SNPs_2614 0 0 0 4 33147130 33147154 mRNA hsa-miR-181a SYNC miRanda miRanda
14034 chr1 33147143 33147143 1 - C T rs360510 33147126 - 33147106 33147146 41 AGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA AGTAAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA < 41bp 1 0.793524248157538 1 0.575097799301147 experiment 0.412951503684923 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 RBBP4;SYNC ENSG00000162520;ENSG00000162521 UTR3 Human other chr1:33147126 chr1:33147143 . . 0 hm6A_associated_SNPs_2614 0 0 0 4 33147130 33147154 mRNA hsa-miR-181b SYNC miRanda miRanda
14034 chr1 33147143 33147143 1 - C T rs360510 33147126 - 33147106 33147146 41 AGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA AGTAAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA < 41bp 1 0.793524248157538 1 0.575097799301147 experiment 0.412951503684923 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 RBBP4;SYNC ENSG00000162520;ENSG00000162521 UTR3 Human other chr1:33147126 chr1:33147143 . . 0 hm6A_associated_SNPs_2614 0 0 0 4 33147130 33147154 mRNA hsa-miR-181c SYNC miRanda miRanda
14034 chr1 33147143 33147143 1 - C T rs360510 33147126 - 33147106 33147146 41 AGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA AGTAAAGGATGAATGTATGGACACATCTGGGAGTATTTTAA < 41bp 1 0.793524248157538 1 0.575097799301147 experiment 0.412951503684923 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 RBBP4;SYNC ENSG00000162520;ENSG00000162521 UTR3 Human other chr1:33147126 chr1:33147143 . . 0 hm6A_associated_SNPs_2614 0 0 0 4 33147130 33147154 mRNA hsa-miR-181d SYNC miRanda miRanda
14034 chr1 33147357 33147357 1 - T G rs6659926 33147344 - 33147324 33147364 41 ACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCT ACCAGACCAGAGTGCCAGAAACTTGGCAAGCAATTCATCCT < 41bp 1 0.625556647428137 1 0.478143513202667 experiment 0.748886705143726 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 RBBP4;SYNC ENSG00000162520;ENSG00000162521 UTR3 Human other chr1:33147344 chr1:33147357 . . 0 hm6A_associated_SNPs_2615 0 0 0 1 33147344 33147366 mRNA hsa-miR-544 SYNC miRanda miRanda
14034 chr1 33324245 33324245 1 + T C rs76675818 33324265 + 33324245 33324285 41 TTCCCACCATGGGGGTCTTGACAAAGCAGAGTAAAAATATG CTCCCACCATGGGGGTCTTGACAAAGCAGAGTAAAAATATG < 41bp 1 0.395129727195044 1 0.0838965773582458 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 S100PBP ENSG00000116497 UTR3 Human protein_coding chr1:33324265 chr1:33324245 . . 0 hm6A_associated_SNPs_2630 0 0 1 2 33324228 33324249 mRNA hsa-miR-1 S100PBP miRanda miRanda
14034 chr1 33324245 33324245 1 + T C rs76675818 33324265 + 33324245 33324285 41 TTCCCACCATGGGGGTCTTGACAAAGCAGAGTAAAAATATG CTCCCACCATGGGGGTCTTGACAAAGCAGAGTAAAAATATG < 41bp 1 0.395129727195044 1 0.0838965773582458 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 S100PBP ENSG00000116497 UTR3 Human protein_coding chr1:33324265 chr1:33324245 . . 0 hm6A_associated_SNPs_2630 0 0 1 2 33324228 33324249 mRNA hsa-miR-206 S100PBP miRanda miRanda
14034 chr1 33765946 33765946 1 + C T rs76620735 33765938 + 33765918 33765958 41 CACCCCCGGCCCTTTGTTTGACTTGCGTCGTCTGATACTCA CACCCCCGGCCCTTTGTTTGACTTGCGTTGTCTGATACTCA < 41bp 1 0.644685314042809 1 0.0519582033157349 experiment 0.710629371914382 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ZNF362 ENSG00000256142 ncRNA_exonic Human other chr1:33765938 chr1:33765946 . . 0 hm6A_associated_SNPs_2632 0 0 1 4 33765942 33765964 mRNA hsa-miR-200b ZNF362 miRanda miRanda
14034 chr1 33765946 33765946 1 + C T rs76620735 33765938 + 33765918 33765958 41 CACCCCCGGCCCTTTGTTTGACTTGCGTCGTCTGATACTCA CACCCCCGGCCCTTTGTTTGACTTGCGTTGTCTGATACTCA < 41bp 1 0.644685314042809 1 0.0519582033157349 experiment 0.710629371914382 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ZNF362 ENSG00000256142 ncRNA_exonic Human other chr1:33765938 chr1:33765946 . . 0 hm6A_associated_SNPs_2632 0 0 1 4 33765941 33765964 mRNA hsa-miR-200c ZNF362 miRanda miRanda
14034 chr1 33765946 33765946 1 + C T rs76620735 33765938 + 33765918 33765958 41 CACCCCCGGCCCTTTGTTTGACTTGCGTCGTCTGATACTCA CACCCCCGGCCCTTTGTTTGACTTGCGTTGTCTGATACTCA < 41bp 1 0.644685314042809 1 0.0519582033157349 experiment 0.710629371914382 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ZNF362 ENSG00000256142 ncRNA_exonic Human other chr1:33765938 chr1:33765946 . . 0 hm6A_associated_SNPs_2632 0 0 1 4 33765934 33765955 mRNA hsa-miR-361-5p ZNF362 miRanda miRanda
14034 chr1 33765946 33765946 1 + C T rs76620735 33765938 + 33765918 33765958 41 CACCCCCGGCCCTTTGTTTGACTTGCGTCGTCTGATACTCA CACCCCCGGCCCTTTGTTTGACTTGCGTTGTCTGATACTCA < 41bp 1 0.644685314042809 1 0.0519582033157349 experiment 0.710629371914382 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ZNF362 ENSG00000256142 ncRNA_exonic Human other chr1:33765938 chr1:33765946 . . 0 hm6A_associated_SNPs_2632 0 0 1 4 33765943 33765964 mRNA hsa-miR-429 ZNF362 miRanda miRanda
14034 chr1 35580950 35580950 1 + C T rs80091471 35580956 + 35580936 35580976 41 CAAAAGACACAGAACGATAAACAGTGAAGTCTCCTTCCCTC CAAAAGACACAGAATGATAAACAGTGAAGTCTCCTTCCCTC < 41bp 1 0.761709214135262 1 0.0201444029808044 experiment 0.476581571729476 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 ZMYM1 ENSG00000197056 UTR3 Human protein_coding chr1:35580956 chr1:35580950 . . 0 hm6A_associated_SNPs_2648 0 0 1 1 35580948 35580971 mRNA hsa-miR-28-5p ZMYM1 miRanda miRanda
14034 chr1 35886813 35886813 1 + G A rs550194976 35886805 + 35886785 35886825 41 ATAAAAGGCATTTAAGTAAAACTAAAATGAAAAAAGTAGGC ATAAAAGGCATTTAAGTAAAACTAAAATAAAAAAAGTAGGC < 41bp 1 0.153489337751621 1 0.243588775396347 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ZMYM4 ENSG00000146463 UTR3 Human protein_coding chr1:35886805 chr1:35886813 . . 0 hm6A_associated_SNPs_2651 0 0 1 1 35886795 35886814 mRNA hsa-miR-590-3p ZMYM4 miRanda miRanda
14034 chr1 36770184 36770184 1 + A T rs114408391 36770179 + 36770159 36770199 41 AGTGTTCACCTCAGTTTGGGACCAAACTGCTTGGATCTTTG AGTGTTCACCTCAGTTTGGGACCAATCTGCTTGGATCTTTG < 41bp 1 0.509152489189816 1 0.961002111434937 experiment 0.981695021620367 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 THRAP3 ENSG00000054118 UTR3 Human protein_coding chr1:36770179 chr1:36770184 . . 0 hm6A_associated_SNPs_2661 0 0 1 2 36770163 36770184 mRNA hsa-miR-133a THRAP3 miRanda miRanda
14034 chr1 36770184 36770184 1 + A T rs114408391 36770179 + 36770159 36770199 41 AGTGTTCACCTCAGTTTGGGACCAAACTGCTTGGATCTTTG AGTGTTCACCTCAGTTTGGGACCAATCTGCTTGGATCTTTG < 41bp 1 0.509152489189816 1 0.961002111434937 experiment 0.981695021620367 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 THRAP3 ENSG00000054118 UTR3 Human protein_coding chr1:36770179 chr1:36770184 . . 0 hm6A_associated_SNPs_2661 0 0 1 2 36770163 36770184 mRNA hsa-miR-133b THRAP3 miRanda miRanda
14034 chr1 38174583 38174583 1 + A C rs141712543 38174591 + 38174571 38174611 41 AGCAGTGACCTCAGTAGGGAACATGTCCGTCTACCCTCTCG AGCAGTGACCTCCGTAGGGAACATGTCCGTCTACCCTCTCG < 41bp 1 0.671627564713692 1 0.109609067440033 experiment 0.656744870572616 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174591 chr1:38174583 . . 0 hm6A_associated_SNPs_2665 0 0 1 1 38174579 38174599 mRNA hsa-miR-613 CDCA8 miRanda miRanda
14034 chr1 38174787 38174787 1 + A C rs61150145 38174770 + 38174750 38174790 41 TTTATCCCTGTTTACTGAAGACCAAATACTGGTTTGGAGAC TTTATCCCTGTTTACTGAAGACCAAATACTGGTTTGGCGAC < 41bp 1 0.415279600639758 1 0.0235619843006134 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174770 chr1:38174787 . . 0 hm6A_associated_SNPs_2666 0 0 1 1 38174772 38174796 mRNA hsa-miR-382 CDCA8 miRanda miRanda
14034 chr1 38174787 38174787 1 + A C rs61150145 38174789 + 38174769 38174809 41 GACCAAATACTGGTTTGGAGACAACTTCCATGTCTTGCTCT GACCAAATACTGGTTTGGCGACAACTTCCATGTCTTGCTCT Direct Loss 1 0.761933197297987 1 0.0707718133926392 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 19 CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174789 chr1:38174787 . . 0 hm6A_associated_SNPs_2667 0 0 1 1 38174772 38174796 mRNA hsa-miR-382 CDCA8 miRanda miRanda
14034 chr1 39470407 39470407 1 + G A rs532927177 39470416 + 39470396 39470436 41 AAACTGGAGACGGGCCATTGACACATGGACTCTGCCTGGGC AAACTGGAGACAGGCCATTGACACATGGACTCTGCCTGGGC < 41bp 1 0.74064300815044 1 0.809525966644287 experiment 0.518713983699121 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 12 AKIRIN1 ENSG00000174574 UTR3 Human protein_coding chr1:39470416 chr1:39470407 . . 0 hm6A_associated_SNPs_2672 0 0 1 1 39470391 39470413 mRNA hsa-miR-328 AKIRIN1 miRanda miRanda
14034 chr1 39470407 39470407 1 + G A rs532927177 39470424 + 39470404 39470444 41 GACGGGCCATTGACACATGGACTCTGCCTGGGCATGTTAGG GACAGGCCATTGACACATGGACTCTGCCTGGGCATGTTAGG < 41bp 1 0.779814152392998 1 0.896259546279907 experiment 0.440371695214003 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 AKIRIN1 ENSG00000174574 UTR3 Human protein_coding chr1:39470424 chr1:39470407 . . 0 hm6A_associated_SNPs_2673 0 0 1 1 39470391 39470413 mRNA hsa-miR-328 AKIRIN1 miRanda miRanda
14034 chr1 40537616 40537616 1 + A G rs112075420 40537596 + 40537576 40537616 41 CACTGGTTAATCTTTTTTTAACAATGAGCATGAAGGTAGCA CACTGGTTAATCTTTTTTTAACAATGAGCATGAAGGTAGCG < 41bp 1 0.622411910683042 1 0.773881912231445 experiment 0.755176178633917 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 CAP1 ENSG00000131236 UTR3 Human protein_coding chr1:40537596 chr1:40537616 . . 0 hm6A_associated_SNPs_2697 0 0 0 3 40537609 40537630 mRNA hsa-miR-362-3p CAP1 miRanda miRanda
14034 chr1 40537616 40537616 1 + A G rs112075420 40537596 + 40537576 40537616 41 CACTGGTTAATCTTTTTTTAACAATGAGCATGAAGGTAGCA CACTGGTTAATCTTTTTTTAACAATGAGCATGAAGGTAGCG < 41bp 1 0.622411910683042 1 0.773881912231445 experiment 0.755176178633917 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 CAP1 ENSG00000131236 UTR3 Human protein_coding chr1:40537596 chr1:40537616 . . 0 hm6A_associated_SNPs_2697 0 0 0 3 40537609 40537630 mRNA hsa-miR-329 CAP1 miRanda miRanda
14034 chr1 40537616 40537616 1 + A G rs112075420 40537596 + 40537576 40537616 41 CACTGGTTAATCTTTTTTTAACAATGAGCATGAAGGTAGCA CACTGGTTAATCTTTTTTTAACAATGAGCATGAAGGTAGCG < 41bp 1 0.622411910683042 1 0.773881912231445 experiment 0.755176178633917 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 CAP1 ENSG00000131236 UTR3 Human protein_coding chr1:40537596 chr1:40537616 . . 0 hm6A_associated_SNPs_2697 0 0 0 3 40537597 40537620 mRNA hsa-miR-544 CAP1 miRanda miRanda
14034 chr1 42925668 42925668 1 + A G rs139273454 42925653 + 42925633 42925673 41 GGCTCTTAGAGATGGTGAAAACTACAAAAAAAACCATGGCT GGCTCTTAGAGATGGTGAAAACTACAAAAAAAACCGTGGCT < 41bp 1 0.742624924840164 1 0.943048655986786 experiment 0.514750150319673 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 36 PPCS ENSG00000127125 UTR3 Human protein_coding chr1:42925653 chr1:42925668 . . 0 hm6A_associated_SNPs_2723 0 0 1 1 42925658 42925680 mRNA hsa-miR-340 PPCS miRanda miRanda
14034 chr1 42925668 42925668 1 + A G rs139273454 42925665 + 42925645 42925685 41 TGGTGAAAACTACAAAAAAAACCATGGCTTTCATATGGACA TGGTGAAAACTACAAAAAAAACCGTGGCTTTCATATGGACA < 41bp 1 0.704452344527056 1 0.962580323219299 experiment 0.591095310945888 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 PPCS ENSG00000127125 UTR3 Human protein_coding chr1:42925665 chr1:42925668 . . 0 hm6A_associated_SNPs_2724 0 0 1 1 42925658 42925680 mRNA hsa-miR-340 PPCS miRanda miRanda
14034 chr1 43916684 43916684 1 + C T rs144470687 43916671 + 43916651 43916691 41 TCAAGTCCCTTTGCTCTCGGACCCTGGGTTTCTCATCCTTT TCAAGTCCCTTTGCTCTCGGACCCTGGGTTTCTTATCCTTT < 41bp 1 0.467807664727609 1 0.750975549221039 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 HYI;SZT2 ENSG00000198198 UTR3 Human protein_coding chr1:43916671 chr1:43916684 . . 0 hm6A_associated_SNPs_2739 0 0 1 1 43916666 43916689 mRNA hsa-miR-185 KIAA0467 miRanda miRanda
14034 chr1 43916778 43916778 1 + G A rs550800195 43916772 + 43916752 43916792 41 GGGAGGGAAGCAGCAGAGAAACTGAAGTGTTAGACACTATG GGGAGGGAAGCAGCAGAGAAACTGAAATGTTAGACACTATG < 41bp 1 0.585597485444414 1 0.915453612804413 experiment 0.828805029111172 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 HYI;SZT2 ENSG00000198198 UTR3 Human protein_coding chr1:43916772 chr1:43916778 . . 0 hm6A_associated_SNPs_2741 0 0 0 1 43916767 43916787 mRNA hsa-miR-505 KIAA0467 miRanda miRanda
14034 chr1 44170316 44170316 1 + G A rs304302 44170336 + 44170316 44170356 41 GGGTCAACTATGCTGGCTGGACTGGCTGCCTTGTTCCTGGC AGGTCAACTATGCTGGCTGGACTGGCTGCCTTGTTCCTGGC < 41bp 1 0.679164593554585 1 0.903721213340759 experiment 0.641670812890831 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 KDM4A-AS1 ENSG00000236200 ncRNA_exonic Human antisense chr1:44170336 chr1:44170316 . . 0 hm6A_associated_SNPs_2755 0 0 1 1 44170311 44170332 mRNA hsa-miR-338-3p KDM4A miRanda miRanda
14034 chr1 45116562 45116562 1 + G A rs555190507 45116574 + 45116554 45116594 41 ACATACATGCACATACTCAAACATGCGTACACACACACACA ACATACATACACATACTCAAACATGCGTACACACACACACA < 41bp 1 0.626486942476466 1 0.900235772132874 experiment 0.747026115047068 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 RNF220 ENSG00000187147 UTR3 Human protein_coding chr1:45116574 chr1:45116562 . . 0 hm6A_associated_SNPs_2765 0 0 1 1 45116550 45116572 mRNA hsa-miR-496 RNF220 miRanda miRanda
14034 chr1 45116603 45116603 1 + C T rs79026532 45116609 + 45116589 45116629 41 CACACATTTACACACGCAGGACTCTGGAGCCAGAGTAGAGG CACACATTTACACATGCAGGACTCTGGAGCCAGAGTAGAGG < 41bp 1 0.657909640172413 1 0.910768270492554 experiment 0.684180719655174 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 RNF220 ENSG00000187147 UTR3 Human protein_coding chr1:45116609 chr1:45116603 . . 0 hm6A_associated_SNPs_2767 0 0 1 1 45116599 45116622 mRNA hsa-miR-149 RNF220 miRanda miRanda
14034 chr1 45794170 45794170 1 + A G rs72890567 45794179 + 45794159 45794199 41 AAATATGTAAGATACAAAGAACAATAAAAGAATTACACACT AAATATGTAAGGTACAAAGAACAATAAAAGAATTACACACT < 41bp 1 0.529010407442604 1 0.741925060749054 experiment 0.941979185114792 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 HPDL ENSG00000186603 UTR3 Human protein_coding chr1:45794179 chr1:45794170 . . 0 hm6A_associated_SNPs_2780 0 0 1 1 45794161 45794183 mRNA hsa-miR-375 HPDL miRanda miRanda
14034 chr1 46487682 46487682 1 + G A rs377326827 46487684 + 46487664 46487704 41 GAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACAT GAGGGCCACGCCAAAGAGAGACAAGGGATTAAATGTGACAT < 41bp 1 0.511819708770995 1 0.891783475875854 experiment 0.976360582458009 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 MAST2 ENSG00000086015 CDS Human protein_coding chr1:46487684 chr1:46487682 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_2790 0 0 1 2 46487682 46487702 mRNA hsa-miR-23a MAST2 miRanda miRanda
14034 chr1 46487682 46487682 1 + G A rs377326827 46487684 + 46487664 46487704 41 GAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACAT GAGGGCCACGCCAAAGAGAGACAAGGGATTAAATGTGACAT < 41bp 1 0.511819708770995 1 0.891783475875854 experiment 0.976360582458009 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 MAST2 ENSG00000086015 CDS Human protein_coding chr1:46487684 chr1:46487682 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_2790 0 0 1 2 46487682 46487702 mRNA hsa-miR-23b MAST2 miRanda miRanda
14034 chr1 47843869 47843869 1 + A G rs116147582 47843889 + 47843869 47843909 41 AACATACTTGCCATTAGAAAACAAAGTATTGCTAAGTACTA GACATACTTGCCATTAGAAAACAAAGTATTGCTAAGTACTA < 41bp 1 0.34268336477207 1 0.0205678045749664 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 CMPK1 ENSG00000162368 UTR3 Human protein_coding chr1:47843889 chr1:47843869 . . 0 hm6A_associated_SNPs_2811 0 0 1 2 47843860 47843881 mRNA hsa-miR-31 CMPK1 miRanda miRanda
14034 chr1 47843869 47843869 1 + A G rs116147582 47843889 + 47843869 47843909 41 AACATACTTGCCATTAGAAAACAAAGTATTGCTAAGTACTA GACATACTTGCCATTAGAAAACAAAGTATTGCTAAGTACTA < 41bp 1 0.34268336477207 1 0.0205678045749664 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 CMPK1 ENSG00000162368 UTR3 Human protein_coding chr1:47843889 chr1:47843869 . . 0 hm6A_associated_SNPs_2811 0 0 1 2 47843854 47843873 mRNA hsa-miR-653 CMPK1 miRanda miRanda
14034 chr1 47843881 47843881 1 + A T rs138974275 47843889 + 47843869 47843909 41 AACATACTTGCCATTAGAAAACAAAGTATTGCTAAGTACTA AACATACTTGCCTTTAGAAAACAAAGTATTGCTAAGTACTA < 41bp 1 0.322781228864924 1 0.0247644782066345 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 CMPK1 ENSG00000162368 UTR3 Human protein_coding chr1:47843889 chr1:47843881 . . 0 hm6A_associated_SNPs_2812 0 0 1 1 47843860 47843881 mRNA hsa-miR-31 CMPK1 miRanda miRanda
14034 chr1 51737270 51737270 1 + G A rs533326693 51737281 + 51737261 51737301 41 AGGAATTGTGTAAAGTGTTAACAGCAGCTGTATTTGTTTAA AGGAATTGTATAAAGTGTTAACAGCAGCTGTATTTGTTTAA < 41bp 1 0.713178732172167 1 0.100301653146744 experiment 0.573642535655666 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 RNF11 ENSG00000123091 UTR3 Human protein_coding chr1:51737281 chr1:51737270 . . 0 hm6A_associated_SNPs_2824 0 0 1 2 51737269 51737290 mRNA hsa-miR-22 RNF11 miRanda miRanda
14034 chr1 51737270 51737270 1 + G A rs533326693 51737281 + 51737261 51737301 41 AGGAATTGTGTAAAGTGTTAACAGCAGCTGTATTTGTTTAA AGGAATTGTATAAAGTGTTAACAGCAGCTGTATTTGTTTAA < 41bp 1 0.713178732172167 1 0.100301653146744 experiment 0.573642535655666 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 RNF11 ENSG00000123091 UTR3 Human protein_coding chr1:51737281 chr1:51737270 . . 0 hm6A_associated_SNPs_2824 0 0 1 2 51737268 51737289 mRNA hsa-miR-370 RNF11 miRanda miRanda
14034 chr1 52253506 52253506 1 + A G rs140616351 52253521 + 52253501 52253541 41 TAGGCATAATTCAGCAACAAACAATCTTCCTTTGGGAGAAA TAGGCGTAATTCAGCAACAAACAATCTTCCTTTGGGAGAAA < 41bp 1 0.759589737694524 1 0.458373457193375 experiment 0.480820524610952 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 6 OSBPL9 ENSG00000117859 UTR3 Human protein_coding chr1:52253521 chr1:52253506 . . 0 hm6A_associated_SNPs_2826 0 0 1 1 52253506 52253529 mRNA hsa-miR-382 OSBPL9 miRanda miRanda
14034 chr1 52883598 52883598 1 + A G rs527758110 52883578 + 52883558 52883598 41 AATGCAGAAGCAAAGGAAGGACTAAAAAGCCTCCACGGACA AATGCAGAAGCAAAGGAAGGACTAAAAAGCCTCCACGGACG < 41bp 1 0.398108265397713 1 0.893679857254028 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 PRPF38A ENSG00000134748 UTR3 Human protein_coding chr1:52883578 chr1:52883598 . . 0 hm6A_associated_SNPs_2830 0 0 1 1 52883595 52883616 mRNA hsa-miR-216b PRPF38A miRanda miRanda
14034 chr1 52883598 52883598 1 + A G rs527758110 52883596 + 52883576 52883616 41 GGACTAAAAAGCCTCCACGGACATCGATAATCAAGAGATTA GGACTAAAAAGCCTCCACGGACGTCGATAATCAAGAGATTA Direct Loss 1 0.276306476629157 1 0.855562150478363 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 PRPF38A ENSG00000134748 UTR3 Human protein_coding chr1:52883596 chr1:52883598 . . 0 hm6A_associated_SNPs_2831 0 0 1 1 52883595 52883616 mRNA hsa-miR-216b PRPF38A miRanda miRanda
14034 chr1 53288729 53288729 1 + C G rs183884128 53288735 + 53288715 53288755 41 GGTTTGTTAGTTCACTGATGACATTTTTTGACAAACATTTT GGTTTGTTAGTTCAGTGATGACATTTTTTGACAAACATTTT < 41bp 1 0.0984262088532699 1 0.0269703269004822 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 ZYG11B ENSG00000162378 UTR3 Human protein_coding chr1:53288735 chr1:53288729 . . 0 hm6A_associated_SNPs_2832 0 0 1 2 53288714 53288736 mRNA hsa-miR-27a ZYG11B miRanda miRanda
14034 chr1 53288729 53288729 1 + C G rs183884128 53288735 + 53288715 53288755 41 GGTTTGTTAGTTCACTGATGACATTTTTTGACAAACATTTT GGTTTGTTAGTTCAGTGATGACATTTTTTGACAAACATTTT < 41bp 1 0.0984262088532699 1 0.0269703269004822 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 ZYG11B ENSG00000162378 UTR3 Human protein_coding chr1:53288735 chr1:53288729 . . 0 hm6A_associated_SNPs_2832 0 0 1 2 53288714 53288736 mRNA hsa-miR-27b ZYG11B miRanda miRanda
14034 chr1 53289214 53289214 1 + C T rs80047585 53289232 + 53289212 53289252 41 TTCGAATGTTAATGTCTAAGACAAAGTTCAGAAAACGAGAT TTTGAATGTTAATGTCTAAGACAAAGTTCAGAAAACGAGAT < 41bp 1 0.0807071585140871 1 0.00635433197021484 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 ZYG11B ENSG00000162378 UTR3 Human protein_coding chr1:53289232 chr1:53289214 . . 0 hm6A_associated_SNPs_2833 0 0 1 1 53289201 53289222 mRNA hsa-miR-543 ZYG11B miRanda miRanda
14034 chr1 53292692 53292692 1 + C T rs78335417 53292695 + 53292675 53292715 41 CAAAAATTAAGAAATCCCTGACTTTTGTAGAATTCCCACTG CAAAAATTAAGAAATCCTTGACTTTTGTAGAATTCCCACTG < 41bp 1 0.0846898601213681 1 0.81543505191803 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 ZYG11B ENSG00000162378 UTR3 Human protein_coding chr1:53292695 chr1:53292692 . . 0 hm6A_associated_SNPs_2836 0 0 1 1 53292671 53292692 mRNA hsa-miR-876-5p ZYG11B miRanda miRanda
14034 chr1 53359868 53359868 1 + G A rs149655343 53359876 + 53359856 53359896 41 AGCTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGT AGCTTGTAGGGCATGGTGGGACTTAGGCATTTGCAGACAGT < 41bp 1 0.29504733631992 1 0.0697599053382874 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 13 ZYG11A ENSG00000203995 UTR3 Human protein_coding chr1:53359876 chr1:53359868 . . 0 hm6A_associated_SNPs_2839 0 0 1 1 53359868 53359891 mRNA hsa-miR-203 ZYG11A miRanda miRanda
14034 chr1 53359880 53359880 1 + A T rs111732953 53359876 + 53359856 53359896 41 AGCTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGT AGCTTGTAGGGCGTGGTGGGACTTTGGCATTTGCAGACAGT < 41bp 1 0.299024422616806 1 0.260442316532135 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 ZYG11A ENSG00000203995 UTR3 Human protein_coding chr1:53359876 chr1:53359880 . . 0 hm6A_associated_SNPs_2840 0 0 1 3 53359868 53359891 mRNA hsa-miR-203 ZYG11A miRanda miRanda
14034 chr1 53359880 53359880 1 + A T rs111732953 53359876 + 53359856 53359896 41 AGCTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGT AGCTTGTAGGGCGTGGTGGGACTTTGGCATTTGCAGACAGT < 41bp 1 0.299024422616806 1 0.260442316532135 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 ZYG11A ENSG00000203995 UTR3 Human protein_coding chr1:53359876 chr1:53359880 . . 0 hm6A_associated_SNPs_2840 0 0 1 3 53359880 53359900 mRNA hsa-miR-141 ZYG11A miRanda miRanda
14034 chr1 53359880 53359880 1 + A T rs111732953 53359876 + 53359856 53359896 41 AGCTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGT AGCTTGTAGGGCGTGGTGGGACTTTGGCATTTGCAGACAGT < 41bp 1 0.299024422616806 1 0.260442316532135 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 ZYG11A ENSG00000203995 UTR3 Human protein_coding chr1:53359876 chr1:53359880 . . 0 hm6A_associated_SNPs_2840 0 0 1 3 53359879 53359900 mRNA hsa-miR-200a ZYG11A miRanda miRanda
14034 chr1 54375907 54375907 1 + C A rs113019354 54375920 + 54375900 54375940 41 GCCAGTTCCCTGTTGAAGAAACAGTTCCCTGTTGAAGAAAG GCCAGTTACCTGTTGAAGAAACAGTTCCCTGTTGAAGAAAG < 41bp 1 0.164319751577025 1 0.837317705154419 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 DIO1 ENSG00000211452 UTR3 Human protein_coding chr1:54375920 chr1:54375907 . . 0 hm6A_associated_SNPs_2847 0 0 0 1 54375897 54375916 mRNA hsa-miR-421 DIO1 miRanda miRanda
14034 chr1 55207534 55207534 1 + T G rs77941984 55207545 + 55207525 55207565 41 CTGAACTTTTGTGGAGTTTGACACCTTAGAGAAGCTACCCC CTGAACTTTGGTGGAGTTTGACACCTTAGAGAAGCTACCCC < 41bp 1 0.664750721317117 1 0.965393304824829 experiment 0.670498557365767 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207545 chr1:55207534 . . 0 hm6A_associated_SNPs_2857 0 0 1 2 55207527 55207549 mRNA hsa-miR-19a TTC4 miRanda miRanda
14034 chr1 55207534 55207534 1 + T G rs77941984 55207545 + 55207525 55207565 41 CTGAACTTTTGTGGAGTTTGACACCTTAGAGAAGCTACCCC CTGAACTTTGGTGGAGTTTGACACCTTAGAGAAGCTACCCC < 41bp 1 0.664750721317117 1 0.965393304824829 experiment 0.670498557365767 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207545 chr1:55207534 . . 0 hm6A_associated_SNPs_2857 0 0 1 2 55207527 55207549 mRNA hsa-miR-19b TTC4 miRanda miRanda
14034 chr1 55207538 55207538 1 + G A rs17131750 55207545 + 55207525 55207565 41 CTGAACTTTTGTGGAGTTTGACACCTTAGAGAAGCTACCCC CTGAACTTTTGTGAAGTTTGACACCTTAGAGAAGCTACCCC < 41bp 1 0.67413701735886 1 0.958038687705994 experiment 0.651725965282279 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207545 chr1:55207538 . . 0 hm6A_associated_SNPs_2858 0 0 1 2 55207527 55207549 mRNA hsa-miR-19a TTC4 miRanda miRanda
14034 chr1 55207538 55207538 1 + G A rs17131750 55207545 + 55207525 55207565 41 CTGAACTTTTGTGGAGTTTGACACCTTAGAGAAGCTACCCC CTGAACTTTTGTGAAGTTTGACACCTTAGAGAAGCTACCCC < 41bp 1 0.67413701735886 1 0.958038687705994 experiment 0.651725965282279 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207545 chr1:55207538 . . 0 hm6A_associated_SNPs_2858 0 0 1 2 55207527 55207549 mRNA hsa-miR-19b TTC4 miRanda miRanda
14034 chr1 62917368 62917368 1 + T A rs564068851 62917373 + 62917353 62917393 41 AAATTTAACTTTTTTTAAAAACTGGGAGGTCAATAAAATTT AAATTTAACTTTTTTAAAAAACTGGGAGGTCAATAAAATTT < 41bp 1 0.180850285820455 1 0.927213668823242 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 USP1 ENSG00000162607 UTR3 Human protein_coding chr1:62917373 chr1:62917368 . . 0 hm6A_associated_SNPs_2882 0 0 1 4 62917365 62917385 mRNA hsa-miR-192 USP1 miRanda miRanda
14034 chr1 62917368 62917368 1 + T A rs564068851 62917373 + 62917353 62917393 41 AAATTTAACTTTTTTTAAAAACTGGGAGGTCAATAAAATTT AAATTTAACTTTTTTAAAAAACTGGGAGGTCAATAAAATTT < 41bp 1 0.180850285820455 1 0.927213668823242 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 USP1 ENSG00000162607 UTR3 Human protein_coding chr1:62917373 chr1:62917368 . . 0 hm6A_associated_SNPs_2882 0 0 1 4 62917365 62917385 mRNA hsa-miR-215 USP1 miRanda miRanda
14034 chr1 62917368 62917368 1 + T A rs564068851 62917373 + 62917353 62917393 41 AAATTTAACTTTTTTTAAAAACTGGGAGGTCAATAAAATTT AAATTTAACTTTTTTAAAAAACTGGGAGGTCAATAAAATTT < 41bp 1 0.180850285820455 1 0.927213668823242 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 USP1 ENSG00000162607 UTR3 Human protein_coding chr1:62917373 chr1:62917368 . . 0 hm6A_associated_SNPs_2882 0 0 1 4 62917357 62917379 mRNA hsa-miR-145 USP1 miRanda miRanda
14034 chr1 62917368 62917368 1 + T A rs564068851 62917373 + 62917353 62917393 41 AAATTTAACTTTTTTTAAAAACTGGGAGGTCAATAAAATTT AAATTTAACTTTTTTAAAAAACTGGGAGGTCAATAAAATTT < 41bp 1 0.180850285820455 1 0.927213668823242 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 USP1 ENSG00000162607 UTR3 Human protein_coding chr1:62917373 chr1:62917368 . . 0 hm6A_associated_SNPs_2882 0 0 1 4 62917360 62917381 mRNA hsa-miR-150 USP1 miRanda miRanda
14034 chr1 63836528 63836528 1 + T G rs116034504 63836534 + 63836514 63836554 41 CTAATTGCGAAGAATCGATAACATTTCAAGAAGTGATAACA CTAATTGCGAAGAAGCGATAACATTTCAAGAAGTGATAACA < 41bp 1 0.329625093798337 1 0.902730703353882 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 ALG6 ENSG00000088035 UTR5 Human protein_coding chr1:63836534 chr1:63836528 . . 0 hm6A_associated_SNPs_2885 0 0 1 1 63836521 63836542 mRNA hsa-miR-203 ALG6 miRanda miRanda
14034 chr1 63877667 63877667 1 + A G rs61755863 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTCTTTGCAGAAAGGGAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.554831599115589 1 0.0133360624313354 experiment 0.890336801768822 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877667 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_2886 2 0 0 3 63877657 63877678 mRNA hsa-miR-204 ALG6 miRanda miRanda
14034 chr1 63877667 63877667 1 + A G rs61755863 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTCTTTGCAGAAAGGGAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.554831599115589 1 0.0133360624313354 experiment 0.890336801768822 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877667 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_2886 2 0 0 3 63877657 63877678 mRNA hsa-miR-211 ALG6 miRanda miRanda
14034 chr1 63877667 63877667 1 + A G rs61755863 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTCTTTGCAGAAAGGGAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.554831599115589 1 0.0133360624313354 experiment 0.890336801768822 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877667 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_2886 2 0 0 3 63877646 63877667 mRNA hsa-miR-186 ALG6 miRanda miRanda
14034 chr1 64125400 64125400 1 + C G rs142912136 64125416 + 64125396 64125436 41 TCATCTGATTGAAGAGCATGACAGAAACAAAATGTATTCAC TCATGTGATTGAAGAGCATGACAGAAACAAAATGTATTCAC < 41bp 1 0.692065833121389 1 0.695285260677338 experiment 0.615868333757221 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 PGM1 ENSG00000079739 UTR3 Human protein_coding chr1:64125416 chr1:64125400 . . 0 hm6A_associated_SNPs_2891 0 0 1 2 64125400 64125422 mRNA hsa-miR-544 PGM1 miRanda miRanda
14034 chr1 64125400 64125400 1 + C G rs142912136 64125416 + 64125396 64125436 41 TCATCTGATTGAAGAGCATGACAGAAACAAAATGTATTCAC TCATGTGATTGAAGAGCATGACAGAAACAAAATGTATTCAC < 41bp 1 0.692065833121389 1 0.695285260677338 experiment 0.615868333757221 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 PGM1 ENSG00000079739 UTR3 Human protein_coding chr1:64125416 chr1:64125400 . . 0 hm6A_associated_SNPs_2891 0 0 1 2 64125387 64125408 mRNA hsa-miR-421 PGM1 miRanda miRanda
14034 chr1 65692657 65692657 1 + G A rs566070255 65692675 + 65692655 65692695 41 TGGTCTGACTTTATGGATTGACACTGTTCCTTTCTTTTATT TGATCTGACTTTATGGATTGACACTGTTCCTTTCTTTTATT < 41bp 1 0.269661204285923 1 0.65768176317215 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 AK4 ENSG00000162433 UTR3 Human protein_coding chr1:65692675 chr1:65692657 . . 0 hm6A_associated_SNPs_2905 0 0 0 2 65692656 65692680 mRNA hsa-miR-301a AK3L1 miRanda miRanda
14034 chr1 65692657 65692657 1 + G A rs566070255 65692675 + 65692655 65692695 41 TGGTCTGACTTTATGGATTGACACTGTTCCTTTCTTTTATT TGATCTGACTTTATGGATTGACACTGTTCCTTTCTTTTATT < 41bp 1 0.269661204285923 1 0.65768176317215 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 AK4 ENSG00000162433 UTR3 Human protein_coding chr1:65692675 chr1:65692657 . . 0 hm6A_associated_SNPs_2905 0 0 0 2 65692656 65692680 mRNA hsa-miR-301b AK3L1 miRanda miRanda
14034 chr1 70717138 70717138 1 + A G rs189466634 70717127 + 70717107 70717147 41 ATTAGGGTTTAAATACAGAAACAAGATTTCAAATAAAACTG ATTAGGGTTTAAATACAGAAACAAGATTTCAGATAAAACTG < 41bp 1 0.466669085144711 1 0.051779568195343 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRSF11 ENSG00000116754 UTR3 Human protein_coding chr1:70717127 chr1:70717138 . . 0 hm6A_associated_SNPs_2929 0 0 1 1 70717117 70717138 mRNA hsa-miR-203 SFRS11 miRanda miRanda
14034 chr1 70833424 70833424 1 + C T rs111833473 70833440 + 70833420 70833460 41 GGTTCCTGCCTTAACTGATGACATTCCACCATTGTGATTTG GGTTTCTGCCTTAACTGATGACATTCCACCATTGTGATTTG < 41bp 1 0.780615574686774 1 0.858778357505798 experiment 0.438768850626452 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 HHLA3 ENSG00000197568 UTR3 Human protein_coding chr1:70833440 chr1:70833424 . . 0 hm6A_associated_SNPs_2931 0 0 1 2 70833408 70833428 mRNA hsa-miR-873 HHLA3 miRanda miRanda
14034 chr1 70833424 70833424 1 + C T rs111833473 70833440 + 70833420 70833460 41 GGTTCCTGCCTTAACTGATGACATTCCACCATTGTGATTTG GGTTTCTGCCTTAACTGATGACATTCCACCATTGTGATTTG < 41bp 1 0.780615574686774 1 0.858778357505798 experiment 0.438768850626452 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 HHLA3 ENSG00000197568 UTR3 Human protein_coding chr1:70833440 chr1:70833424 . . 0 hm6A_associated_SNPs_2931 0 0 1 2 70833412 70833428 mRNA hsa-miR-873 HHLA3 miRanda miRanda
14034 chr1 70833451 70833451 1 + T C rs150671354 70833440 + 70833420 70833460 41 GGTTCCTGCCTTAACTGATGACATTCCACCATTGTGATTTG GGTTCCTGCCTTAACTGATGACATTCCACCACTGTGATTTG < 41bp 1 0.758357964767749 1 0.827134013175964 experiment 0.483284070464503 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 HHLA3 ENSG00000197568 UTR3 Human protein_coding chr1:70833440 chr1:70833451 . . 0 hm6A_associated_SNPs_2932 0 0 0 1 70833447 70833467 mRNA hsa-miR-873 HHLA3 miRanda miRanda
14034 chr1 70833460 70833460 1 + G C rs139838462 70833440 + 70833420 70833460 41 GGTTCCTGCCTTAACTGATGACATTCCACCATTGTGATTTG GGTTCCTGCCTTAACTGATGACATTCCACCATTGTGATTTC < 41bp 1 0.731329372128811 1 0.855489373207092 experiment 0.537341255742378 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 HHLA3 ENSG00000197568 UTR3 Human protein_coding chr1:70833440 chr1:70833460 . . 0 hm6A_associated_SNPs_2933 0 0 1 1 70833447 70833467 mRNA hsa-miR-873 HHLA3 miRanda miRanda
14034 chr1 75230867 75230867 1 + C T rs186324278 75230880 + 75230860 75230900 41 TAACAGACTTATTCCTGGAGACAGCATTTGAGGAGGAATTG TAACAGATTTATTCCTGGAGACAGCATTTGAGGAGGAATTG < 41bp 1 0.179052018094564 1 0.340714931488037 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 TYW3 ENSG00000162623 UTR3 Human protein_coding chr1:75230880 chr1:75230867 . . 0 hm6A_associated_SNPs_2940 0 0 1 1 75230848 75230870 mRNA hsa-miR-382 TYW3 miRanda miRanda
14034 chr1 77529358 77529358 1 + A C rs149522606 77529356 + 77529336 77529376 41 AAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACA AAAGCAGGCTGAAACTATGGACCTGATTTCTGAAGAGCACA < 41bp 1 0.0311941354343725 1 0.614397168159485 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 23 ST6GALNAC5 ENSG00000117069 UTR3 Human protein_coding chr1:77529356 chr1:77529358 . . 0 hm6A_associated_SNPs_2946 0 0 0 1 77529356 77529378 mRNA hsa-miR-455-5p ST6GALNAC5 miRanda miRanda
14034 chr1 77529367 77529367 1 + G A rs41292246 77529356 + 77529336 77529376 41 AAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACA AAAGCAGGCTGAAACTATGGACATGATTTCTAAAGAGCACA < 41bp 1 0.100299743319813 1 0.748463332653046 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 32 ST6GALNAC5 ENSG00000117069 UTR3 Human protein_coding chr1:77529356 chr1:77529367 . . 0 hm6A_associated_SNPs_2947 0 0 0 1 77529356 77529378 mRNA hsa-miR-455-5p ST6GALNAC5 miRanda miRanda
14034 chr1 78481954 78481954 1 + A G rs201576053 78481940 + 78481920 78481960 41 CCTGCCTCATAGAATGAAGAACTTTGTTACACATATTTTGA CCTGCCTCATAGAATGAAGAACTTTGTTACACATGTTTTGA < 41bp 1 0.795034688151921 1 0.985867321491241 experiment 0.409930623696158 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 DNAJB4 ENSG00000162616 UTR3 Human protein_coding chr1:78481940 chr1:78481954 . . 0 hm6A_associated_SNPs_2948 0 0 1 3 78481949 78481971 mRNA hsa-miR-148a DNAJB4 miRanda miRanda
14034 chr1 78481954 78481954 1 + A G rs201576053 78481940 + 78481920 78481960 41 CCTGCCTCATAGAATGAAGAACTTTGTTACACATATTTTGA CCTGCCTCATAGAATGAAGAACTTTGTTACACATGTTTTGA < 41bp 1 0.795034688151921 1 0.985867321491241 experiment 0.409930623696158 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 DNAJB4 ENSG00000162616 UTR3 Human protein_coding chr1:78481940 chr1:78481954 . . 0 hm6A_associated_SNPs_2948 0 0 1 3 78481950 78481971 mRNA hsa-miR-152 DNAJB4 miRanda miRanda
14034 chr1 78481954 78481954 1 + A G rs201576053 78481940 + 78481920 78481960 41 CCTGCCTCATAGAATGAAGAACTTTGTTACACATATTTTGA CCTGCCTCATAGAATGAAGAACTTTGTTACACATGTTTTGA < 41bp 1 0.795034688151921 1 0.985867321491241 experiment 0.409930623696158 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 DNAJB4 ENSG00000162616 UTR3 Human protein_coding chr1:78481940 chr1:78481954 . . 0 hm6A_associated_SNPs_2948 0 0 1 3 78481949 78481971 mRNA hsa-miR-148b DNAJB4 miRanda miRanda
14034 chr1 82456276 82456276 1 + G A rs200002945 82456281 + 82456261 82456301 41 ACTTACGGGGCAGCAGCAAGACTCACAACCTCGAGCTCACG ACTTACGGGGCAGCAACAAGACTCACAACCTCGAGCTCACG < 41bp 1 0.737216661917254 1 0.998823285102844 experiment 0.525566676165491 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 16 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456281 chr1:82456276 nonsynonymous SNV 0.947 0 hm6A_associated_SNPs_2953 0 0 1 1 82456264 82456283 mRNA hsa-miR-431 LPHN2 miRanda miRanda
14034 chr1 82456485 82456485 1 + G A rs148763084 82456491 + 82456471 82456511 41 AGAAAGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAA AGAAAGTGAAGTCCAAGGGAACTGACAGCTATGTCTCCCAA < 41bp 1 0.546603098318935 1 0.999558985233307 experiment 0.906793803362129 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456491 chr1:82456485 nonsynonymous SNV 0.966 2 hm6A_associated_SNPs_2955 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr1 82456485 82456485 1 + G A rs148763084 82456495 + 82456475 82456515 41 AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA AGTGAAGTCCAAGGGAACTGACAGCTATGTCTCCCAACTGA < 41bp 1 0.781125889580795 1 0.999582409858704 experiment 0.437748220838411 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456495 chr1:82456485 nonsynonymous SNV 0.966 2 hm6A_associated_SNPs_2956 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr1 82456501 82456501 1 + A G rs74098542 82456491 + 82456471 82456511 41 AGAAAGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAA AGAAAGTGAAGTCCGAGGGAACTGACAGCTGTGTCTCCCAA < 41bp 1 0.532215885706478 1 0.999346852302551 experiment 0.935568228587044 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456491 chr1:82456501 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_2957 0 0 1 1 82456495 82456517 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr1 82456501 82456501 1 + A G rs74098542 82456495 + 82456475 82456515 41 AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA AGTGAAGTCCGAGGGAACTGACAGCTGTGTCTCCCAACTGA < 41bp 1 0.778687555072548 1 0.999471783638 experiment 0.442624889854904 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456495 chr1:82456501 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_2958 0 0 1 1 82456495 82456517 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr1 82457422 82457422 1 + A G rs569818793 82457419 + 82457399 82457439 41 TTTCCTCAACTGTACAATGAACTATTCTCATGAAAAATGGC TTTCCTCAACTGTACAATGAACTGTTCTCATGAAAAATGGC < 41bp 1 0.159858453034219 1 0.956908285617828 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 ADGRL2 ENSG00000117114 UTR3 Human protein_coding chr1:82457419 chr1:82457422 . . 0 hm6A_associated_SNPs_2961 0 0 1 1 82457411 82457432 mRNA hsa-miR-433 LPHN2 miRanda miRanda
14034 chr1 84963253 84963253 1 + A G rs539454410 84963262 + 84963242 84963282 41 GGCATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAAT GGCATTTGCTGGTTTCATAAACCTTTCACGTCTGGACGAAT < 41bp 1 0.225835655501234 1 0.172269225120544 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 RPF1 ENSG00000117133 UTR3 Human protein_coding chr1:84963262 chr1:84963253 . . 0 hm6A_associated_SNPs_2965 0 0 1 1 84963249 84963270 mRNA hsa-miR-488 RPF1 miRanda miRanda
14034 chr1 93299193 93299193 1 + G A rs58263806 93299194 + 93299174 93299214 41 ACAGGATGATAGTTCGTGTGACAAACAGAGATATCATTTGT ACAGGATGATAGTTCGTGTAACAAACAGAGATATCATTTGT < 41bp 1 0.591169500764257 1 0.108925342559814 experiment 0.817660998471486 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 20 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299194 chr1:93299193 synonymous SNV . 0 hm6A_associated_SNPs_3002 1 0 1 1 93299172 93299195 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr1 93299193 93299193 1 + G A rs58263806 93299198 + 93299178 93299218 41 GATGATAGTTCGTGTGACAAACAGAGATATCATTTGTCAGG GATGATAGTTCGTGTAACAAACAGAGATATCATTTGTCAGG < 41bp 1 0.422261513613788 1 0.0771217346191406 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299198 chr1:93299193 synonymous SNV . 0 hm6A_associated_SNPs_3003 1 0 1 1 93299172 93299195 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr1 93300404 93300404 1 + T C rs113792800 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACGAACTGCCAAAATACGGTGTGAA < 41bp 1 0.235247229938178 1 0.714282155036926 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300404 synonymous SNV . 0 hm6A_associated_SNPs_3004 2 0 1 1 93300391 93300412 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr1 93300404 93300404 1 + T C rs113792800 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ACGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT < 41bp 1 0.682421869245328 1 0.230795204639435 experiment 0.635156261509344 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300404 synonymous SNV . 0 hm6A_associated_SNPs_3005 2 0 1 1 93300391 93300412 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr1 93604436 93604436 1 + G A rs369639137 93604427 + 93604407 93604447 41 AGTCCTTTAATTCTAACTGAACACCAGCAGTATTTTTAGAA AGTCCTTTAATTCTAACTGAACACCAGCAATATTTTTAGAA < 41bp 1 0.46862569180335 1 0.0923507511615753 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 MTF2 ENSG00000143033 UTR3 Human protein_coding chr1:93604427 chr1:93604436 . . 0 hm6A_associated_SNPs_3008 0 0 1 4 93604421 93604441 mRNA hsa-miR-200b MTF2 miRanda miRanda
14034 chr1 93604436 93604436 1 + G A rs369639137 93604427 + 93604407 93604447 41 AGTCCTTTAATTCTAACTGAACACCAGCAGTATTTTTAGAA AGTCCTTTAATTCTAACTGAACACCAGCAATATTTTTAGAA < 41bp 1 0.46862569180335 1 0.0923507511615753 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 MTF2 ENSG00000143033 UTR3 Human protein_coding chr1:93604427 chr1:93604436 . . 0 hm6A_associated_SNPs_3008 0 0 1 4 93604418 93604441 mRNA hsa-miR-200c MTF2 miRanda miRanda
14034 chr1 93604436 93604436 1 + G A rs369639137 93604427 + 93604407 93604447 41 AGTCCTTTAATTCTAACTGAACACCAGCAGTATTTTTAGAA AGTCCTTTAATTCTAACTGAACACCAGCAATATTTTTAGAA < 41bp 1 0.46862569180335 1 0.0923507511615753 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 MTF2 ENSG00000143033 UTR3 Human protein_coding chr1:93604427 chr1:93604436 . . 0 hm6A_associated_SNPs_3008 0 0 1 4 93604417 93604438 mRNA hsa-miR-370 MTF2 miRanda miRanda
14034 chr1 93604436 93604436 1 + G A rs369639137 93604427 + 93604407 93604447 41 AGTCCTTTAATTCTAACTGAACACCAGCAGTATTTTTAGAA AGTCCTTTAATTCTAACTGAACACCAGCAATATTTTTAGAA < 41bp 1 0.46862569180335 1 0.0923507511615753 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 MTF2 ENSG00000143033 UTR3 Human protein_coding chr1:93604427 chr1:93604436 . . 0 hm6A_associated_SNPs_3008 0 0 1 4 93604421 93604441 mRNA hsa-miR-429 MTF2 miRanda miRanda
14034 chr1 94983959 94983959 1 + G A rs141334643 94983943 + 94983923 94983963 41 TTTTTGCAGAATTAACTATAACAATCACTGGCTACCGAAGT TTTTTGCAGAATTAACTATAACAATCACTGGCTACCAAAGT < 41bp 1 0.442776502636923 1 0.193081587553024 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ABCD3 ENSG00000117528 UTR3 Human protein_coding chr1:94983943 chr1:94983959 . . 0 hm6A_associated_SNPs_3018 0 0 1 1 94983958 94983979 mRNA hsa-miR-101 ABCD3 miRanda miRanda
14034 chr1 94984178 94984178 1 + T G rs188149196 94984161 + 94984141 94984181 41 AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCTTGA AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCGTGA < 41bp 1 0.182281657225421 1 0.205539494752884 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 38 ABCD3 ENSG00000117528 UTR3 Human protein_coding chr1:94984161 chr1:94984178 . . 0 hm6A_associated_SNPs_3019 0 0 1 4 94984166 94984187 mRNA hsa-miR-26a ABCD3 miRanda miRanda
14034 chr1 94984178 94984178 1 + T G rs188149196 94984161 + 94984141 94984181 41 AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCTTGA AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCGTGA < 41bp 1 0.182281657225421 1 0.205539494752884 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 38 ABCD3 ENSG00000117528 UTR3 Human protein_coding chr1:94984161 chr1:94984178 . . 0 hm6A_associated_SNPs_3019 0 0 1 4 94984167 94984187 mRNA hsa-miR-26b ABCD3 miRanda miRanda
14034 chr1 94984178 94984178 1 + T G rs188149196 94984161 + 94984141 94984181 41 AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCTTGA AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCGTGA < 41bp 1 0.182281657225421 1 0.205539494752884 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 38 ABCD3 ENSG00000117528 UTR3 Human protein_coding chr1:94984161 chr1:94984178 . . 0 hm6A_associated_SNPs_3019 0 0 1 4 94984176 94984196 mRNA hsa-miR-599 ABCD3 miRanda miRanda
14034 chr1 94984178 94984178 1 + T G rs188149196 94984161 + 94984141 94984181 41 AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCTTGA AATTCAGCCTTGACTTGAAAACATAGATAGTTTAATCGTGA < 41bp 1 0.182281657225421 1 0.205539494752884 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 38 ABCD3 ENSG00000117528 UTR3 Human protein_coding chr1:94984161 chr1:94984178 . . 0 hm6A_associated_SNPs_3019 0 0 1 4 94984171 94984187 mRNA hsa-miR-1297 ABCD3 miRanda miRanda
14034 chr1 100548041 100548041 1 + T C rs184705621 100548049 + 100548029 100548069 41 AATTAAAAACTATATATGTAACTTCTTAGATATTAGCAAAT AATTAAAAACTACATATGTAACTTCTTAGATATTAGCAAAT < 41bp 1 0.522151367666046 1 0.698410451412201 experiment 0.955697264667908 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 MFSD14A ENSG00000241073 ncRNA_intronic Human antisense chr1:100548049 chr1:100548041 . . 0 hm6A_associated_SNPs_3033 0 0 1 1 100548028 100548049 mRNA hsa-miR-448 HIAT1 miRanda miRanda
14034 chr1 100548168 100548168 1 + T A rs6690579 100548165 + 100548145 100548185 41 TTGTGGACCTATTTGTTTTAACATTGTAAAATTTTGAGTCA TTGTGGACCTATTTGTTTTAACAATGTAAAATTTTGAGTCA < 41bp 1 0.734762397013291 1 0.137730002403259 experiment 0.530475205973418 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MFSD14A ENSG00000241073 ncRNA_intronic Human antisense chr1:100548165 chr1:100548168 . . 0 hm6A_associated_SNPs_3034 0 0 1 3 100548164 100548187 mRNA hsa-miR-149 HIAT1 miRanda miRanda
14034 chr1 100548168 100548168 1 + T A rs6690579 100548165 + 100548145 100548185 41 TTGTGGACCTATTTGTTTTAACATTGTAAAATTTTGAGTCA TTGTGGACCTATTTGTTTTAACAATGTAAAATTTTGAGTCA < 41bp 1 0.734762397013291 1 0.137730002403259 experiment 0.530475205973418 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MFSD14A ENSG00000241073 ncRNA_intronic Human antisense chr1:100548165 chr1:100548168 . . 0 hm6A_associated_SNPs_3034 0 0 1 3 100548164 100548183 mRNA hsa-miR-371-5p HIAT1 miRanda miRanda
14034 chr1 100548168 100548168 1 + T A rs6690579 100548165 + 100548145 100548185 41 TTGTGGACCTATTTGTTTTAACATTGTAAAATTTTGAGTCA TTGTGGACCTATTTGTTTTAACAATGTAAAATTTTGAGTCA < 41bp 1 0.734762397013291 1 0.137730002403259 experiment 0.530475205973418 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MFSD14A ENSG00000241073 ncRNA_intronic Human antisense chr1:100548165 chr1:100548168 . . 0 hm6A_associated_SNPs_3034 0 0 1 3 100548155 100548178 mRNA hsa-miR-590-3p HIAT1 miRanda miRanda
14034 chr1 100614827 100614827 1 + C A rs150051272 100614807 + 100614787 100614827 41 AGGGCCAATCTGAGAATTTGACTTATATGTGGACATTTTTC AGGGCCAATCTGAGAATTTGACTTATATGTGGACATTTTTA < 41bp 1 0.268055508292116 1 0.293344914913177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 TRMT13 ENSG00000122435 UTR3 Human protein_coding chr1:100614807 chr1:100614827 . . 0 hm6A_associated_SNPs_3037 0 0 1 1 100614825 100614849 mRNA hsa-miR-218 CCDC76 miRanda miRanda
14034 chr1 100614827 100614827 1 + C A rs150051272 100614819 + 100614799 100614839 41 AGAATTTGACTTATATGTGGACATTTTTCCCTACAGATCTG AGAATTTGACTTATATGTGGACATTTTTACCTACAGATCTG < 41bp 1 0.521795883444104 1 0.341198801994324 experiment 0.956408233111793 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 29 TRMT13 ENSG00000122435 UTR3 Human protein_coding chr1:100614819 chr1:100614827 . . 0 hm6A_associated_SNPs_3038 0 0 1 1 100614825 100614849 mRNA hsa-miR-218 CCDC76 miRanda miRanda
14034 chr1 107601616 107601616 1 + C T rs142601494 107601632 + 107601612 107601652 41 TTATCCTTGTAGCCAATAAAACATTGACATTCTCACGTTTT TTATTCTTGTAGCCAATAAAACATTGACATTCTCACGTTTT < 41bp 1 0.746637753383198 1 0.00762215256690979 experiment 0.506724493233604 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 PRMT6 ENSG00000198890 UTR3 Human protein_coding chr1:107601632 chr1:107601616 . . 0 hm6A_associated_SNPs_3046 0 0 1 1 107601606 107601630 mRNA hsa-miR-137 PRMT6 miRanda miRanda
14034 chr1 107601620 107601620 1 + G T rs537550111 107601632 + 107601612 107601652 41 TTATCCTTGTAGCCAATAAAACATTGACATTCTCACGTTTT TTATCCTTTTAGCCAATAAAACATTGACATTCTCACGTTTT < 41bp 1 0.711142417914839 1 0.00758722424507141 experiment 0.577715164170321 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 PRMT6 ENSG00000198890 UTR3 Human protein_coding chr1:107601632 chr1:107601620 . . 0 hm6A_associated_SNPs_3047 0 0 1 1 107601606 107601630 mRNA hsa-miR-137 PRMT6 miRanda miRanda
14034 chr1 109242956 109242956 1 + A G rs183758979 109242974 + 109242954 109242994 41 AAATTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTG AAGTTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTG < 41bp 1 0.31050180097031 1 0.0628825426101685 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 3 PRPF38B ENSG00000134186 UTR3 Human protein_coding chr1:109242974 chr1:109242956 . . 0 hm6A_associated_SNPs_3053 0 0 1 3 109242951 109242973 mRNA hsa-miR-137 PRPF38B miRanda miRanda
14034 chr1 109242956 109242956 1 + A G rs183758979 109242974 + 109242954 109242994 41 AAATTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTG AAGTTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTG < 41bp 1 0.31050180097031 1 0.0628825426101685 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 3 PRPF38B ENSG00000134186 UTR3 Human protein_coding chr1:109242974 chr1:109242956 . . 0 hm6A_associated_SNPs_3053 0 0 1 3 109242943 109242964 mRNA hsa-miR-381 PRPF38B miRanda miRanda
14034 chr1 109242956 109242956 1 + A G rs183758979 109242974 + 109242954 109242994 41 AAATTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTG AAGTTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTG < 41bp 1 0.31050180097031 1 0.0628825426101685 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 3 PRPF38B ENSG00000134186 UTR3 Human protein_coding chr1:109242974 chr1:109242956 . . 0 hm6A_associated_SNPs_3053 0 0 1 3 109242943 109242964 mRNA hsa-miR-300 PRPF38B miRanda miRanda
14034 chr1 109780654 109780654 1 + C T rs181895775 109780640 + 109780620 109780660 41 ACTGCGTAGCTGAGAGGGGAACAGTGCCATGTACCACACAG ACTGCGTAGCTGAGAGGGGAACAGTGCCATGTACTACACAG < 41bp 1 0.410256745998396 1 0.843530178070068 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 SARS ENSG00000031698 UTR3 Human protein_coding chr1:109780640 chr1:109780654 . . 0 hm6A_associated_SNPs_3065 0 0 1 3 109780644 109780666 mRNA hsa-miR-141 SARS miRanda miRanda
14034 chr1 109780654 109780654 1 + C T rs181895775 109780640 + 109780620 109780660 41 ACTGCGTAGCTGAGAGGGGAACAGTGCCATGTACCACACAG ACTGCGTAGCTGAGAGGGGAACAGTGCCATGTACTACACAG < 41bp 1 0.410256745998396 1 0.843530178070068 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 SARS ENSG00000031698 UTR3 Human protein_coding chr1:109780640 chr1:109780654 . . 0 hm6A_associated_SNPs_3065 0 0 1 3 109780644 109780666 mRNA hsa-miR-200a SARS miRanda miRanda
14034 chr1 109780654 109780654 1 + C T rs181895775 109780640 + 109780620 109780660 41 ACTGCGTAGCTGAGAGGGGAACAGTGCCATGTACCACACAG ACTGCGTAGCTGAGAGGGGAACAGTGCCATGTACTACACAG < 41bp 1 0.410256745998396 1 0.843530178070068 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 SARS ENSG00000031698 UTR3 Human protein_coding chr1:109780640 chr1:109780654 . . 0 hm6A_associated_SNPs_3065 0 0 1 3 109780650 109780670 mRNA hsa-miR-873 SARS miRanda miRanda
14034 chr1 110135742 110135742 1 + G A rs115879755 110135731 + 110135711 110135751 41 AGTCAGCTTCTTGGATACAGACACACCCAGGGCAGCTGCCA AGTCAGCTTCTTGGATACAGACACACCCAGGACAGCTGCCA < 41bp 1 0.370296105783293 1 0.933915019035339 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 GNAI3 ENSG00000065135 UTR3 Human protein_coding chr1:110135731 chr1:110135742 . . 0 hm6A_associated_SNPs_3076 0 0 1 1 110135728 110135751 mRNA hsa-miR-34a GNAI3 miRanda miRanda
14034 chr1 112003956 112003956 1 + G A rs191668877 112003939 + 112003919 112003959 41 TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGGGTT TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGAGTT < 41bp 1 0.742138677475129 1 0.28032249212265 experiment 0.515722645049742 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 ATP5F1 ENSG00000116459 UTR3 Human protein_coding chr1:112003939 chr1:112003956 . . 0 hm6A_associated_SNPs_3090 0 0 1 6 112003937 112003959 mRNA hsa-miR-10a ATP5F1 miRanda miRanda
14034 chr1 112003956 112003956 1 + G A rs191668877 112003939 + 112003919 112003959 41 TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGGGTT TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGAGTT < 41bp 1 0.742138677475129 1 0.28032249212265 experiment 0.515722645049742 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 ATP5F1 ENSG00000116459 UTR3 Human protein_coding chr1:112003939 chr1:112003956 . . 0 hm6A_associated_SNPs_3090 0 0 1 6 112003937 112003959 mRNA hsa-miR-10b ATP5F1 miRanda miRanda
14034 chr1 112003956 112003956 1 + G A rs191668877 112003939 + 112003919 112003959 41 TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGGGTT TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGAGTT < 41bp 1 0.742138677475129 1 0.28032249212265 experiment 0.515722645049742 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 ATP5F1 ENSG00000116459 UTR3 Human protein_coding chr1:112003939 chr1:112003956 . . 0 hm6A_associated_SNPs_3090 0 0 1 6 112003950 112003973 mRNA hsa-miR-381 ATP5F1 miRanda miRanda
14034 chr1 112003956 112003956 1 + G A rs191668877 112003939 + 112003919 112003959 41 TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGGGTT TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGAGTT < 41bp 1 0.742138677475129 1 0.28032249212265 experiment 0.515722645049742 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 ATP5F1 ENSG00000116459 UTR3 Human protein_coding chr1:112003939 chr1:112003956 . . 0 hm6A_associated_SNPs_3090 0 0 1 6 112003936 112003958 mRNA hsa-miR-339-5p ATP5F1 miRanda miRanda
14034 chr1 112003956 112003956 1 + G A rs191668877 112003939 + 112003919 112003959 41 TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGGGTT TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGAGTT < 41bp 1 0.742138677475129 1 0.28032249212265 experiment 0.515722645049742 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 ATP5F1 ENSG00000116459 UTR3 Human protein_coding chr1:112003939 chr1:112003956 . . 0 hm6A_associated_SNPs_3090 0 0 1 6 112003941 112003960 mRNA hsa-miR-504 ATP5F1 miRanda miRanda
14034 chr1 112003956 112003956 1 + G A rs191668877 112003939 + 112003919 112003959 41 TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGGGTT TACCATCTTGCAATAAAGTGACAATTGAATGAAACAGAGTT < 41bp 1 0.742138677475129 1 0.28032249212265 experiment 0.515722645049742 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 ATP5F1 ENSG00000116459 UTR3 Human protein_coding chr1:112003939 chr1:112003956 . . 0 hm6A_associated_SNPs_3090 0 0 1 6 112003950 112003973 mRNA hsa-miR-300 ATP5F1 miRanda miRanda
14034 chr1 113243293 113243293 1 + C T rs550656913 113243303 + 113243283 113243323 41 AATGACACATCAAGCTGCTAACAATTGGGGGAAGGGGAAGG AATGACACATTAAGCTGCTAACAATTGGGGGAAGGGGAAGG < 41bp 1 0.542557398855813 1 0.897047638893127 experiment 0.914885202288374 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 MOV10 ENSG00000155363 UTR3 Human protein_coding chr1:113243303 chr1:113243293 . . 0 hm6A_associated_SNPs_3098 0 0 1 6 113243281 113243302 mRNA hsa-miR-15a MOV10 miRanda miRanda
14034 chr1 113243293 113243293 1 + C T rs550656913 113243303 + 113243283 113243323 41 AATGACACATCAAGCTGCTAACAATTGGGGGAAGGGGAAGG AATGACACATTAAGCTGCTAACAATTGGGGGAAGGGGAAGG < 41bp 1 0.542557398855813 1 0.897047638893127 experiment 0.914885202288374 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 MOV10 ENSG00000155363 UTR3 Human protein_coding chr1:113243303 chr1:113243293 . . 0 hm6A_associated_SNPs_3098 0 0 1 6 113243281 113243302 mRNA hsa-miR-16 MOV10 miRanda miRanda
14034 chr1 113243293 113243293 1 + C T rs550656913 113243303 + 113243283 113243323 41 AATGACACATCAAGCTGCTAACAATTGGGGGAAGGGGAAGG AATGACACATTAAGCTGCTAACAATTGGGGGAAGGGGAAGG < 41bp 1 0.542557398855813 1 0.897047638893127 experiment 0.914885202288374 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 MOV10 ENSG00000155363 UTR3 Human protein_coding chr1:113243303 chr1:113243293 . . 0 hm6A_associated_SNPs_3098 0 0 1 6 113243281 113243302 mRNA hsa-miR-15b MOV10 miRanda miRanda
14034 chr1 113243293 113243293 1 + C T rs550656913 113243303 + 113243283 113243323 41 AATGACACATCAAGCTGCTAACAATTGGGGGAAGGGGAAGG AATGACACATTAAGCTGCTAACAATTGGGGGAAGGGGAAGG < 41bp 1 0.542557398855813 1 0.897047638893127 experiment 0.914885202288374 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 MOV10 ENSG00000155363 UTR3 Human protein_coding chr1:113243303 chr1:113243293 . . 0 hm6A_associated_SNPs_3098 0 0 1 6 113243282 113243302 mRNA hsa-miR-195 MOV10 miRanda miRanda
14034 chr1 113243293 113243293 1 + C T rs550656913 113243303 + 113243283 113243323 41 AATGACACATCAAGCTGCTAACAATTGGGGGAAGGGGAAGG AATGACACATTAAGCTGCTAACAATTGGGGGAAGGGGAAGG < 41bp 1 0.542557398855813 1 0.897047638893127 experiment 0.914885202288374 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 MOV10 ENSG00000155363 UTR3 Human protein_coding chr1:113243303 chr1:113243293 . . 0 hm6A_associated_SNPs_3098 0 0 1 6 113243282 113243302 mRNA hsa-miR-497 MOV10 miRanda miRanda
14034 chr1 113243293 113243293 1 + C T rs550656913 113243303 + 113243283 113243323 41 AATGACACATCAAGCTGCTAACAATTGGGGGAAGGGGAAGG AATGACACATTAAGCTGCTAACAATTGGGGGAAGGGGAAGG < 41bp 1 0.542557398855813 1 0.897047638893127 experiment 0.914885202288374 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 MOV10 ENSG00000155363 UTR3 Human protein_coding chr1:113243303 chr1:113243293 . . 0 hm6A_associated_SNPs_3098 0 0 1 6 113243280 113243302 mRNA hsa-miR-503 MOV10 miRanda miRanda
14034 chr1 114455314 114455314 1 + C T rs115123839 114455307 + 114455287 114455327 41 TTCTATTTTTAAAATTATGAACTATGGCGCTGCATGCTTCA TTCTATTTTTAAAATTATGAACTATGGTGCTGCATGCTTCA < 41bp 1 0.605927547730841 1 0.766457676887512 experiment 0.788144904538318 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114455307 chr1:114455314 . . 0 hm6A_associated_SNPs_3109 0 0 1 3 114455302 114455325 mRNA hsa-miR-15a DCLRE1B miRanda miRanda
14034 chr1 114455314 114455314 1 + C T rs115123839 114455307 + 114455287 114455327 41 TTCTATTTTTAAAATTATGAACTATGGCGCTGCATGCTTCA TTCTATTTTTAAAATTATGAACTATGGTGCTGCATGCTTCA < 41bp 1 0.605927547730841 1 0.766457676887512 experiment 0.788144904538318 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114455307 chr1:114455314 . . 0 hm6A_associated_SNPs_3109 0 0 1 3 114455302 114455325 mRNA hsa-miR-15b DCLRE1B miRanda miRanda
14034 chr1 114455314 114455314 1 + C T rs115123839 114455307 + 114455287 114455327 41 TTCTATTTTTAAAATTATGAACTATGGCGCTGCATGCTTCA TTCTATTTTTAAAATTATGAACTATGGTGCTGCATGCTTCA < 41bp 1 0.605927547730841 1 0.766457676887512 experiment 0.788144904538318 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114455307 chr1:114455314 . . 0 hm6A_associated_SNPs_3109 0 0 1 3 114455303 114455325 mRNA hsa-miR-497 DCLRE1B miRanda miRanda
14034 chr1 114455801 114455801 1 + C A rs41283518 114455819 + 114455799 114455839 41 GTCCTTCTGCTCATAACCTGACAAAATGCCAAACTAGTAAG GTACTTCTGCTCATAACCTGACAAAATGCCAAACTAGTAAG < 41bp 1 0.46383605946485 1 0.0548122227191925 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114455819 chr1:114455801 . . 0 hm6A_associated_SNPs_3110 0 0 1 1 114455797 114455818 mRNA hsa-miR-154 DCLRE1B miRanda miRanda
14034 chr1 114456390 114456390 1 + C A rs1054022 114456379 + 114456359 114456399 41 ATCTGTATATAACATAAGAAACTTTGAAAGTCAAAAAAACA ATCTGTATATAACATAAGAAACTTTGAAAGTAAAAAAAACA < 41bp 1 0.0235489519642904 1 0.0369182527065277 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114456379 chr1:114456390 . . 0 hm6A_associated_SNPs_3112 0 0 1 1 114456384 114456404 mRNA hsa-miR-129-5p DCLRE1B miRanda miRanda
14034 chr1 114456398 114456398 1 + C A rs3088041 114456379 + 114456359 114456399 41 ATCTGTATATAACATAAGAAACTTTGAAAGTCAAAAAAACA ATCTGTATATAACATAAGAAACTTTGAAAGTCAAAAAAAAA < 41bp 1 0.0275049473887148 1 0.036477267742157 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114456379 chr1:114456398 . . 0 hm6A_associated_SNPs_3113 0 0 1 1 114456384 114456404 mRNA hsa-miR-129-5p DCLRE1B miRanda miRanda
14034 chr1 117532372 117532372 1 + G T rs11836 117532382 + 117532362 117532402 41 CTGTTGAGATGTTTCATGGGACAGTAGAACTCTGACTCACC CTGTTGAGATTTTTCATGGGACAGTAGAACTCTGACTCACC < 41bp 1 0.32635288499825 1 0.985902547836304 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 PTGFRN ENSG00000134247 UTR3 Human protein_coding chr1:117532382 chr1:117532372 . . 0 hm6A_associated_SNPs_3139 0 0 1 3 117532350 117532374 mRNA hsa-miR-181a PTGFRN miRanda miRanda
14034 chr1 117532372 117532372 1 + G T rs11836 117532382 + 117532362 117532402 41 CTGTTGAGATGTTTCATGGGACAGTAGAACTCTGACTCACC CTGTTGAGATTTTTCATGGGACAGTAGAACTCTGACTCACC < 41bp 1 0.32635288499825 1 0.985902547836304 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 PTGFRN ENSG00000134247 UTR3 Human protein_coding chr1:117532382 chr1:117532372 . . 0 hm6A_associated_SNPs_3139 0 0 1 3 117532353 117532374 mRNA hsa-miR-181c PTGFRN miRanda miRanda
14034 chr1 117532372 117532372 1 + G T rs11836 117532382 + 117532362 117532402 41 CTGTTGAGATGTTTCATGGGACAGTAGAACTCTGACTCACC CTGTTGAGATTTTTCATGGGACAGTAGAACTCTGACTCACC < 41bp 1 0.32635288499825 1 0.985902547836304 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 PTGFRN ENSG00000134247 UTR3 Human protein_coding chr1:117532382 chr1:117532372 . . 0 hm6A_associated_SNPs_3139 0 0 1 3 117532357 117532377 mRNA hsa-miR-494 PTGFRN miRanda miRanda
14034 chr1 117532377 117532377 1 + A G rs150222246 117532382 + 117532362 117532402 41 CTGTTGAGATGTTTCATGGGACAGTAGAACTCTGACTCACC CTGTTGAGATGTTTCGTGGGACAGTAGAACTCTGACTCACC < 41bp 1 0.351752082493692 1 0.984268844127655 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 16 PTGFRN ENSG00000134247 UTR3 Human protein_coding chr1:117532382 chr1:117532377 . . 0 hm6A_associated_SNPs_3140 0 0 1 1 117532357 117532377 mRNA hsa-miR-494 PTGFRN miRanda miRanda
14034 chr1 117532829 117532829 1 + A G rs560791324 117532841 + 117532821 117532861 41 ATCTGCAGAATTTTCCGTAGACAAAGAAAGGATCTTGTGTA ATCTGCAGGATTTTCCGTAGACAAAGAAAGGATCTTGTGTA < 41bp 1 0.587475866852567 1 0.276432722806931 experiment 0.825048266294866 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 PTGFRN ENSG00000134247 UTR3 Human protein_coding chr1:117532841 chr1:117532829 . . 0 hm6A_associated_SNPs_3141 0 0 1 1 117532808 117532831 mRNA hsa-miR-544 PTGFRN miRanda miRanda
14034 chr1 118065701 118065701 1 + A G rs182087068 118065688 + 118065668 118065708 41 TGGACCTCTATGTCAACATGACAGGGTGAAACTATTCCCCC TGGACCTCTATGTCAACATGACAGGGTGAAACTGTTCCCCC < 41bp 1 0.79079162960552 1 0.816784858703613 experiment 0.41841674078896 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 MAN1A2 ENSG00000198162 UTR3 Human protein_coding chr1:118065688 chr1:118065701 . . 0 hm6A_associated_SNPs_3155 0 0 1 3 118065699 118065719 mRNA hsa-miR-212 MAN1A2 miRanda miRanda
14034 chr1 118065701 118065701 1 + A G rs182087068 118065688 + 118065668 118065708 41 TGGACCTCTATGTCAACATGACAGGGTGAAACTATTCCCCC TGGACCTCTATGTCAACATGACAGGGTGAAACTGTTCCCCC < 41bp 1 0.79079162960552 1 0.816784858703613 experiment 0.41841674078896 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 MAN1A2 ENSG00000198162 UTR3 Human protein_coding chr1:118065688 chr1:118065701 . . 0 hm6A_associated_SNPs_3155 0 0 1 3 118065696 118065719 mRNA hsa-miR-132 MAN1A2 miRanda miRanda
14034 chr1 118065701 118065701 1 + A G rs182087068 118065688 + 118065668 118065708 41 TGGACCTCTATGTCAACATGACAGGGTGAAACTATTCCCCC TGGACCTCTATGTCAACATGACAGGGTGAAACTGTTCCCCC < 41bp 1 0.79079162960552 1 0.816784858703613 experiment 0.41841674078896 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 MAN1A2 ENSG00000198162 UTR3 Human protein_coding chr1:118065688 chr1:118065701 . . 0 hm6A_associated_SNPs_3155 0 0 1 3 118065686 118065706 mRNA hsa-miR-613 MAN1A2 miRanda miRanda
14034 chr1 118065777 118065777 1 + T C rs550831198 118065765 + 118065745 118065785 41 ATTATTCCATTTTATACCTGACCAAAACATGTTCTGATATG ATTATTCCATTTTATACCTGACCAAAACATGTCCTGATATG < 41bp 1 0.699364148864713 1 0.804774403572083 experiment 0.601271702270575 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MAN1A2 ENSG00000198162 UTR3 Human protein_coding chr1:118065765 chr1:118065777 . . 0 hm6A_associated_SNPs_3156 0 0 1 1 118065763 118065784 mRNA hsa-miR-361-5p MAN1A2 miRanda miRanda
14034 chr1 118502426 118502426 1 + G A rs79121815 118502408 + 118502388 118502428 41 TTTCATTGGAGTTGAAATTAACATTTCAAAAGTTTTTCGTA TTTCATTGGAGTTGAAATTAACATTTCAAAAGTTTTTCATA < 41bp 1 0.619392611767627 1 0.49258080124855 experiment 0.761214776464746 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 WDR3 ENSG00000065183 UTR3 Human protein_coding chr1:118502408 chr1:118502426 . . 0 hm6A_associated_SNPs_3159 0 0 1 2 118502423 118502445 mRNA hsa-miR-346 WDR3 miRanda miRanda
14034 chr1 118502426 118502426 1 + G A rs79121815 118502408 + 118502388 118502428 41 TTTCATTGGAGTTGAAATTAACATTTCAAAAGTTTTTCGTA TTTCATTGGAGTTGAAATTAACATTTCAAAAGTTTTTCATA < 41bp 1 0.619392611767627 1 0.49258080124855 experiment 0.761214776464746 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 WDR3 ENSG00000065183 UTR3 Human protein_coding chr1:118502408 chr1:118502426 . . 0 hm6A_associated_SNPs_3159 0 0 1 2 118502426 118502449 mRNA hsa-miR-216b WDR3 miRanda miRanda
14034 chr1 120286803 120286803 1 + A G rs587687027 120286793 + 120286773 120286813 41 ACTGCTTACACTGCACTCTGACCCTGTAGTACAGCAATAAC ACTGCTTACACTGCACTCTGACCCTGTAGTGCAGCAATAAC < 41bp 1 0.259196048841202 1 0.72826486825943 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 PHGDH ENSG00000092621 UTR3 Human protein_coding chr1:120286793 chr1:120286803 . . 0 hm6A_associated_SNPs_3171 0 0 1 1 120286791 120286812 mRNA hsa-miR-137 PHGDH miRanda miRanda
14034 chr1 120286803 120286803 1 + A G rs587687027 120286812 + 120286792 120286832 41 GACCCTGTAGTACAGCAATAACCGTCTAATAAAGAGCCTAC GACCCTGTAGTGCAGCAATAACCGTCTAATAAAGAGCCTAC < 41bp 1 0.308206208601218 1 0.708486199378967 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 PHGDH ENSG00000092621 UTR3 Human protein_coding chr1:120286812 chr1:120286803 . . 0 hm6A_associated_SNPs_3172 0 0 1 1 120286791 120286812 mRNA hsa-miR-137 PHGDH miRanda miRanda
14034 chr1 145511212 145511212 1 + C A rs71664100 145511206 + 145511186 145511226 41 CTTTCTCAAGTACTATTCTAACATTGCGCTTTATAAGGGAT CTTTCTCAAGTACTATTCTAACATTGAGCTTTATAAGGGAT < 41bp 1 0.215837782487705 1 0.72671902179718 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 27 GNRHR2 ENSG00000211451 ncRNA_intronic Human transcribed_unitary_pseudogene chr1:145511206 chr1:145511212 . . 0 hm6A_associated_SNPs_3182 0 0 1 1 145511196 145511221 mRNA hsa-miR-340 RBM8A miRanda miRanda
14034 chr1 145512676 145512676 1 + A G rs587627379 145512664 + 145512644 145512684 41 TAGTTAGCAGTAGAGCCGAGACTCAGAAAAAAACAAAGTAA TAGTTAGCAGTAGAGCCGAGACTCAGAAAAAAGCAAAGTAA < 41bp 1 0.30391621641072 1 0.317653059959412 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 GNRHR2 ENSG00000211451 ncRNA_intronic Human transcribed_unitary_pseudogene chr1:145512664 chr1:145512676 . . 0 hm6A_associated_SNPs_3183 0 0 1 1 145512674 145512696 mRNA hsa-miR-346 RBM8A miRanda miRanda
14034 chr1 150117140 150117140 1 + G C rs151124746 150117149 + 150117129 150117169 41 AGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCT AGACTCCCAGACTTGTCCTAACAATAAGTCTGAGCCCATCT < 41bp 1 0.524272802087977 1 0.279506117105484 experiment 0.951454395824046 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 VPS45 ENSG00000136631 UTR3 Human protein_coding chr1:150117149 chr1:150117140 . . 0 hm6A_associated_SNPs_3199 0 0 1 2 150117117 150117141 mRNA hsa-miR-330-5p VPS45 miRanda miRanda
14034 chr1 150117140 150117140 1 + G C rs151124746 150117149 + 150117129 150117169 41 AGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCT AGACTCCCAGACTTGTCCTAACAATAAGTCTGAGCCCATCT < 41bp 1 0.524272802087977 1 0.279506117105484 experiment 0.951454395824046 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 VPS45 ENSG00000136631 UTR3 Human protein_coding chr1:150117149 chr1:150117140 . . 0 hm6A_associated_SNPs_3199 0 0 1 2 150117122 150117141 mRNA hsa-miR-326 VPS45 miRanda miRanda
14034 chr1 150280759 150280759 1 + A G rs587638233 150280763 + 150280743 150280783 41 ATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAA ATTACCATTCTCTGCAGTAAACTCAAATCACATGTCTGCAA < 41bp 1 0.344789136496995 1 0.954015731811523 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MRPS21 ENSG00000187145 UTR3 Human other chr1:150280763 chr1:150280759 . . 0 hm6A_associated_SNPs_3210 0 0 1 6 150280740 150280761 mRNA hsa-miR-25 MRPS21 miRanda miRanda
14034 chr1 150280759 150280759 1 + A G rs587638233 150280763 + 150280743 150280783 41 ATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAA ATTACCATTCTCTGCAGTAAACTCAAATCACATGTCTGCAA < 41bp 1 0.344789136496995 1 0.954015731811523 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MRPS21 ENSG00000187145 UTR3 Human other chr1:150280763 chr1:150280759 . . 0 hm6A_associated_SNPs_3210 0 0 1 6 150280740 150280761 mRNA hsa-miR-32 MRPS21 miRanda miRanda
14034 chr1 150280759 150280759 1 + A G rs587638233 150280763 + 150280743 150280783 41 ATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAA ATTACCATTCTCTGCAGTAAACTCAAATCACATGTCTGCAA < 41bp 1 0.344789136496995 1 0.954015731811523 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MRPS21 ENSG00000187145 UTR3 Human other chr1:150280763 chr1:150280759 . . 0 hm6A_associated_SNPs_3210 0 0 1 6 150280740 150280761 mRNA hsa-miR-92a MRPS21 miRanda miRanda
14034 chr1 150280759 150280759 1 + A G rs587638233 150280763 + 150280743 150280783 41 ATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAA ATTACCATTCTCTGCAGTAAACTCAAATCACATGTCTGCAA < 41bp 1 0.344789136496995 1 0.954015731811523 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MRPS21 ENSG00000187145 UTR3 Human other chr1:150280763 chr1:150280759 . . 0 hm6A_associated_SNPs_3210 0 0 1 6 150280740 150280761 mRNA hsa-miR-363 MRPS21 miRanda miRanda
14034 chr1 150280759 150280759 1 + A G rs587638233 150280763 + 150280743 150280783 41 ATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAA ATTACCATTCTCTGCAGTAAACTCAAATCACATGTCTGCAA < 41bp 1 0.344789136496995 1 0.954015731811523 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MRPS21 ENSG00000187145 UTR3 Human other chr1:150280763 chr1:150280759 . . 0 hm6A_associated_SNPs_3210 0 0 1 6 150280744 150280761 mRNA hsa-miR-367 MRPS21 miRanda miRanda
14034 chr1 150280759 150280759 1 + A G rs587638233 150280763 + 150280743 150280783 41 ATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAA ATTACCATTCTCTGCAGTAAACTCAAATCACATGTCTGCAA < 41bp 1 0.344789136496995 1 0.954015731811523 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MRPS21 ENSG00000187145 UTR3 Human other chr1:150280763 chr1:150280759 . . 0 hm6A_associated_SNPs_3210 0 0 1 6 150280740 150280761 mRNA hsa-miR-92b MRPS21 miRanda miRanda
14034 chr1 151007013 151007013 1 + G T rs148392030 151007021 + 151007001 151007041 41 GTGGGACAAAAAGAATTTAGACCCCAAAAGTGTCCTCGGCA GTGGGACAAAAATAATTTAGACCCCAAAAGTGTCCTCGGCA < 41bp 1 0.662499042249845 1 0.824933290481567 experiment 0.675001915500309 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 PRUNE1 ENSG00000143363 UTR3 Human protein_coding chr1:151007021 chr1:151007013 . . 0 hm6A_associated_SNPs_3222 0 0 1 1 151006992 151007013 mRNA hsa-miR-129-5p PRUNE miRanda miRanda
14034 chr1 151220950 151220950 1 + A G rs146229137 151220933 + 151220913 151220953 41 CAAGCCATTTTCAGATCAGAACTCCAGAAGTGTTGACAAGA CAAGCCATTTTCAGATCAGAACTCCAGAAGTGTTGACGAGA < 41bp 1 0.184451056062296 1 0.860194385051727 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 PIP5K1A ENSG00000143398 UTR3 Human protein_coding chr1:151220933 chr1:151220950 . . 0 hm6A_associated_SNPs_3226 0 0 1 1 151220929 151220950 mRNA hsa-miR-505 PIP5K1A miRanda miRanda
14034 chr1 151220950 151220950 1 + A G rs146229137 151220948 + 151220928 151220968 41 TCAGAACTCCAGAAGTGTTGACAAGATGCCTATTCGTAGAG TCAGAACTCCAGAAGTGTTGACGAGATGCCTATTCGTAGAG Direct Loss 1 0.22470018053109 1 0.716703414916992 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 PIP5K1A ENSG00000143398 UTR3 Human protein_coding chr1:151220948 chr1:151220950 . . 0 hm6A_associated_SNPs_3227 0 0 1 1 151220929 151220950 mRNA hsa-miR-505 PIP5K1A miRanda miRanda
14034 chr1 151263782 151263782 1 + A G rs10788803 151263776 + 151263756 151263796 41 CGGCTGGGGAGTTTTCATTAACATTAATATTTTGTTAATTC CGGCTGGGGAGTTTTCATTAACATTAGTATTTTGTTAATTC < 41bp 1 0.573749795183495 1 0.877115964889526 experiment 0.85250040963301 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 ZNF687 ENSG00000143373 UTR3 Human protein_coding chr1:151263776 chr1:151263782 . . 0 hm6A_associated_SNPs_3232 0 0 1 1 151263771 151263792 mRNA hsa-miR-495 ZNF687 miRanda miRanda
14034 chr1 151554521 151554521 1 + C G rs567616992 151554540 + 151554520 151554560 41 TCATCAGATTGGGAGAGGTGACAAGATTTGCCTCAGCCCTA TGATCAGATTGGGAGAGGTGACAAGATTTGCCTCAGCCCTA < 41bp 1 0.51974820310811 1 0.889677166938782 experiment 0.960503593783779 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 TUFT1 ENSG00000143367 UTR3 Human protein_coding chr1:151554540 chr1:151554521 . . 0 hm6A_associated_SNPs_3237 0 0 0 1 151554514 151554535 mRNA hsa-miR-150 TUFT1 miRanda miRanda
14034 chr1 153617935 153617935 1 + T C rs567635059 153617931 + 153617911 153617951 41 TTGATACTGTGTTGTATGAAACCCTTTTGTCCTTTGATTTG TTGATACTGTGTTGTATGAAACCCCTTTGTCCTTTGATTTG < 41bp 1 0.460484674635587 1 0.0697132647037506 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 CHTOP ENSG00000160679 UTR3 Human protein_coding chr1:153617931 chr1:153617935 . . 0 hm6A_associated_SNPs_3243 0 0 1 1 153617915 153617936 mRNA hsa-miR-296-3p C1orf77 miRanda miRanda
14034 chr1 153746134 153746134 1 + C T rs183385964 153746151 + 153746131 153746171 41 AAGCTAGGATGAGAGCAGAGACTCAGTGTGTGGGTGTCCCT AAGTTAGGATGAGAGCAGAGACTCAGTGTGTGGGTGTCCCT < 41bp 1 0.448668469807973 1 0.43271005153656 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 INTS3 ENSG00000143624 UTR3 Human protein_coding chr1:153746151 chr1:153746134 . . 0 hm6A_associated_SNPs_3248 0 0 1 2 153746114 153746136 mRNA hsa-miR-21 INTS3 miRanda miRanda
14034 chr1 153746134 153746134 1 + C T rs183385964 153746151 + 153746131 153746171 41 AAGCTAGGATGAGAGCAGAGACTCAGTGTGTGGGTGTCCCT AAGTTAGGATGAGAGCAGAGACTCAGTGTGTGGGTGTCCCT < 41bp 1 0.448668469807973 1 0.43271005153656 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 INTS3 ENSG00000143624 UTR3 Human protein_coding chr1:153746151 chr1:153746134 . . 0 hm6A_associated_SNPs_3248 0 0 1 2 153746115 153746136 mRNA hsa-miR-590-5p INTS3 miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951333 154951355 mRNA hsa-miR-17 CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951333 154951355 mRNA hsa-miR-20a CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951333 154951355 mRNA hsa-miR-93 CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951333 154951355 mRNA hsa-miR-106a CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951321 154951340 mRNA hsa-miR-124 CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951335 154951355 mRNA hsa-miR-106b CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951333 154951355 mRNA hsa-miR-20b CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951334 154951355 mRNA hsa-miR-519d CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951319 154951340 mRNA hsa-miR-506 CKS1B miRanda miRanda
14034 chr1 154951336 154951336 1 + C A rs576760340 154951322 + 154951302 154951342 41 TTCCTAACATCTTTCTGATAACATTATTATGTTGCCTTCTT TTCCTAACATCTTTCTGATAACATTATTATGTTGACTTCTT < 41bp 1 0.581682208835052 1 0.198939085006714 experiment 0.836635582329896 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951322 chr1:154951336 . . 0 hm6A_associated_SNPs_3260 0 0 0 10 154951329 154951350 mRNA hsa-miR-539 CKS1B miRanda miRanda
14034 chr1 154951652 154951652 1 + G A rs146096618 154951656 + 154951636 154951676 41 TATGTTTCAGTGTACTGGAAACTTTCCATTTTATTCAAGAA TATGTTTCAGTGTACTAGAAACTTTCCATTTTATTCAAGAA < 41bp 1 0.392818062312256 1 0.376173675060272 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951656 chr1:154951652 . . 0 hm6A_associated_SNPs_3261 0 0 1 1 154951635 154951654 mRNA hsa-miR-101 CKS1B miRanda miRanda
14034 chr1 155106550 155106550 1 + A G rs9297 155106535 + 155106515 155106555 41 TTCCACTTCTGCTGCTGCAAACCCCGTGAAGGTGTATGCCA TTCCACTTCTGCTGCTGCAAACCCCGTGAAGGTGTGTGCCA < 41bp 1 0.491740168907448 1 0.853756248950958 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 EFNA1 ENSG00000169242 UTR3 Human protein_coding chr1:155106535 chr1:155106550 . . 0 hm6A_associated_SNPs_3269 0 0 1 1 155106544 155106563 mRNA hsa-miR-199a-5p EFNA1 miRanda miRanda
14034 chr1 155584194 155584194 1 + G A rs564968560 155584197 + 155584177 155584217 41 TGCACTTTTTACATTTAGAAACACTGTGATTAGACCACAGA TGCACTTTTTACATTTAAAAACACTGTGATTAGACCACAGA < 41bp 1 0.787767791920471 1 0.914447128772736 experiment 0.424464416159058 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 18 MSTO2P ENSG00000203761 ncRNA_intronic Human unprocessed_pseudogene chr1:155584197 chr1:155584194 . . 0 hm6A_associated_SNPs_3283 0 0 0 3 155584184 155584206 mRNA hsa-miR-27a MSTO1 miRanda miRanda
14034 chr1 155584194 155584194 1 + G A rs564968560 155584197 + 155584177 155584217 41 TGCACTTTTTACATTTAGAAACACTGTGATTAGACCACAGA TGCACTTTTTACATTTAAAAACACTGTGATTAGACCACAGA < 41bp 1 0.787767791920471 1 0.914447128772736 experiment 0.424464416159058 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 18 MSTO2P ENSG00000203761 ncRNA_intronic Human unprocessed_pseudogene chr1:155584197 chr1:155584194 . . 0 hm6A_associated_SNPs_3283 0 0 0 3 155584184 155584206 mRNA hsa-miR-27b MSTO1 miRanda miRanda
14034 chr1 155584194 155584194 1 + G A rs564968560 155584197 + 155584177 155584217 41 TGCACTTTTTACATTTAGAAACACTGTGATTAGACCACAGA TGCACTTTTTACATTTAAAAACACTGTGATTAGACCACAGA < 41bp 1 0.787767791920471 1 0.914447128772736 experiment 0.424464416159058 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 18 MSTO2P ENSG00000203761 ncRNA_intronic Human unprocessed_pseudogene chr1:155584197 chr1:155584194 . . 0 hm6A_associated_SNPs_3283 0 0 0 3 155584185 155584205 mRNA hsa-miR-128 MSTO1 miRanda miRanda
14034 chr1 155708104 155708104 1 + C T rs559234648 155708084 + 155708064 155708104 41 GGACATCTGCTTTATGCTGGACCCAGTAAGATGAGGAAGTC GGACATCTGCTTTATGCTGGACCCAGTAAGATGAGGAAGTT < 41bp 1 0.543940924805551 1 0.850796461105347 experiment 0.912118150388898 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 41 DAP3 ENSG00000203761 ncRNA_intronic Human unprocessed_pseudogene chr1:155708084 chr1:155708104 . . 0 hm6A_associated_SNPs_3289 0 0 1 1 155708091 155708114 mRNA hsa-miR-346 DAP3 miRanda miRanda
14034 chr1 156181749 156181749 1 + C T rs76810986 156181754 + 156181734 156181774 41 ATTCTTCCACCTTGGCCAGAACAGGTTCTGAAAACCACTTC ATTCTTCCACCTTGGTCAGAACAGGTTCTGAAAACCACTTC < 41bp 1 0.607824539843029 1 0.109185248613358 experiment 0.784350920313942 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 SLC25A44 ENSG00000160785 UTR3 Human protein_coding chr1:156181754 chr1:156181749 . . 0 hm6A_associated_SNPs_3301 0 0 1 1 156181749 156181773 mRNA hsa-miR-140-5p SLC25A44 miRanda miRanda
14034 chr1 156181770 156181770 1 + A G rs2853641 156181754 + 156181734 156181774 41 ATTCTTCCACCTTGGCCAGAACAGGTTCTGAAAACCACTTC ATTCTTCCACCTTGGCCAGAACAGGTTCTGAAAACCGCTTC < 41bp 1 0.614540784856579 1 0.180361896753311 experiment 0.770918430286842 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 37 SLC25A44 ENSG00000160785 UTR3 Human protein_coding chr1:156181754 chr1:156181770 . . 0 hm6A_associated_SNPs_3302 0 0 1 1 156181749 156181773 mRNA hsa-miR-140-5p SLC25A44 miRanda miRanda
14034 chr1 156182496 156182496 1 + A C rs565300609 156182476 + 156182456 156182496 41 ACAAGGGAATGAAAAGGCAGACTCTCTGAACGTTTGATGAA ACAAGGGAATGAAAAGGCAGACTCTCTGAACGTTTGATGAC < 41bp 1 0.510825158320916 1 0.995216369628906 experiment 0.978349683358167 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 SLC25A44 ENSG00000160785 UTR3 Human protein_coding chr1:156182476 chr1:156182496 . . 0 hm6A_associated_SNPs_3303 0 0 1 1 156182485 156182508 mRNA hsa-miR-335 SLC25A44 miRanda miRanda
14034 chr1 156182496 156182496 1 + A C rs565300609 156182501 + 156182481 156182521 41 CTGAACGTTTGATGAAATGGACTCTTGTGAAAATTAACAGT CTGAACGTTTGATGACATGGACTCTTGTGAAAATTAACAGT < 41bp 1 0.759589605782457 1 0.99696284532547 experiment 0.480820788435087 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 SLC25A44 ENSG00000160785 UTR3 Human protein_coding chr1:156182501 chr1:156182496 . . 0 hm6A_associated_SNPs_3304 0 0 1 1 156182485 156182508 mRNA hsa-miR-335 SLC25A44 miRanda miRanda
14034 chr1 160113097 160113097 1 + T C rs569138964 160113088 + 160113068 160113108 41 TTGGAGATTACTAACTGTGGACAAAAGTTTATCTTTGCACA TTGGAGATTACTAACTGTGGACAAAAGTTCATCTTTGCACA < 41bp 1 0.171837957432214 1 0.35486227273941 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 30 ATP1A2 ENSG00000018625 UTR3 Human protein_coding chr1:160113088 chr1:160113097 . . 0 hm6A_associated_SNPs_3317 0 0 0 4 160113086 160113108 mRNA hsa-miR-19a ATP1A2 miRanda miRanda
14034 chr1 160113097 160113097 1 + T C rs569138964 160113088 + 160113068 160113108 41 TTGGAGATTACTAACTGTGGACAAAAGTTTATCTTTGCACA TTGGAGATTACTAACTGTGGACAAAAGTTCATCTTTGCACA < 41bp 1 0.171837957432214 1 0.35486227273941 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 30 ATP1A2 ENSG00000018625 UTR3 Human protein_coding chr1:160113088 chr1:160113097 . . 0 hm6A_associated_SNPs_3317 0 0 0 4 160113091 160113108 mRNA hsa-miR-19b ATP1A2 miRanda miRanda
14034 chr1 160113097 160113097 1 + T C rs569138964 160113088 + 160113068 160113108 41 TTGGAGATTACTAACTGTGGACAAAAGTTTATCTTTGCACA TTGGAGATTACTAACTGTGGACAAAAGTTCATCTTTGCACA < 41bp 1 0.171837957432214 1 0.35486227273941 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 30 ATP1A2 ENSG00000018625 UTR3 Human protein_coding chr1:160113088 chr1:160113097 . . 0 hm6A_associated_SNPs_3317 0 0 0 4 160113087 160113110 mRNA hsa-miR-182 ATP1A2 miRanda miRanda
14034 chr1 160113097 160113097 1 + T C rs569138964 160113088 + 160113068 160113108 41 TTGGAGATTACTAACTGTGGACAAAAGTTTATCTTTGCACA TTGGAGATTACTAACTGTGGACAAAAGTTCATCTTTGCACA < 41bp 1 0.171837957432214 1 0.35486227273941 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 30 ATP1A2 ENSG00000018625 UTR3 Human protein_coding chr1:160113088 chr1:160113097 . . 0 hm6A_associated_SNPs_3317 0 0 0 4 160113092 160113112 mRNA hsa-miR-219-5p ATP1A2 miRanda miRanda
14034 chr1 161332847 161332847 1 + A G rs114438179 161332832 + 161332812 161332852 41 GAGAAAATATATAGCTTTGGACACGAGGAAGATCTAGAAAA GAGAAAATATATAGCTTTGGACACGAGGAAGATCTGGAAAA < 41bp 1 0.600219599220704 1 0.12463054060936 experiment 0.799560801558592 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 SDHC ENSG00000143252 UTR3 Human protein_coding chr1:161332832 chr1:161332847 . . 0 hm6A_associated_SNPs_3338 1 0 1 2 161332841 161332863 mRNA hsa-miR-433 LOC642502 miRanda miRanda
14034 chr1 161332847 161332847 1 + A G rs114438179 161332832 + 161332812 161332852 41 GAGAAAATATATAGCTTTGGACACGAGGAAGATCTAGAAAA GAGAAAATATATAGCTTTGGACACGAGGAAGATCTGGAAAA < 41bp 1 0.600219599220704 1 0.12463054060936 experiment 0.799560801558592 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 SDHC ENSG00000143252 UTR3 Human protein_coding chr1:161332832 chr1:161332847 . . 0 hm6A_associated_SNPs_3338 1 0 1 2 161332841 161332863 mRNA hsa-miR-433 SDHC miRanda miRanda
14034 chr1 161647673 161647673 1 + G A rs142007051 161647679 + 161647659 161647699 41 ATGTTACAGGTTACGTGAGAACAATCATGTAAATCTATATG ATGTTACAGGTTACATGAGAACAATCATGTAAATCTATATG < 41bp 1 0.509072890873266 1 0.249527722597122 experiment 0.981854218253468 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 15 FCGR2B ENSG00000072694 UTR3 Human protein_coding chr1:161647679 chr1:161647673 . . 0 hm6A_associated_SNPs_3339 0 0 1 1 161647669 161647689 mRNA hsa-miR-433 FCGR2B miRanda miRanda
14034 chr1 161928771 161928771 1 + G A rs1136046 161928768 + 161928748 161928788 41 TGTGATGGTTTTGTGTTTAAACAGTCATCTTCTTTTAAATA TGTGATGGTTTTGTGTTTAAACAATCATCTTCTTTTAAATA < 41bp 1 0.639551508770916 1 0.285800695419312 experiment 0.720896982458167 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 ATF6 ENSG00000118217 UTR3 Human protein_coding chr1:161928768 chr1:161928771 . . 0 hm6A_associated_SNPs_3350 0 0 1 2 161928755 161928776 mRNA hsa-miR-134 ATF6 miRanda miRanda
14034 chr1 161928771 161928771 1 + G A rs1136046 161928768 + 161928748 161928788 41 TGTGATGGTTTTGTGTTTAAACAGTCATCTTCTTTTAAATA TGTGATGGTTTTGTGTTTAAACAATCATCTTCTTTTAAATA < 41bp 1 0.639551508770916 1 0.285800695419312 experiment 0.720896982458167 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 ATF6 ENSG00000118217 UTR3 Human protein_coding chr1:161928768 chr1:161928771 . . 0 hm6A_associated_SNPs_3350 0 0 1 2 161928762 161928783 mRNA hsa-miR-186 ATF6 miRanda miRanda
14034 chr1 163044300 163044300 1 + G A rs569249131 163044319 + 163044299 163044339 41 AGGAGCCAAGAGTTCAGCAGACTGTGCTTCCCTGGTCCCTC AAGAGCCAAGAGTTCAGCAGACTGTGCTTCCCTGGTCCCTC < 41bp 1 0.782548140372011 1 0.966784834861755 experiment 0.434903719255977 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 2 RGS4 ENSG00000117152 CDS Human protein_coding chr1:163044319 chr1:163044300 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_3360 0 0 0 1 163044285 163044307 mRNA hsa-miR-328 RGS4 miRanda miRanda
14034 chr1 163044301 163044301 1 + G C rs142250495 163044319 + 163044299 163044339 41 AGGAGCCAAGAGTTCAGCAGACTGTGCTTCCCTGGTCCCTC AGCAGCCAAGAGTTCAGCAGACTGTGCTTCCCTGGTCCCTC < 41bp 1 0.774463174463554 1 0.972949624061584 experiment 0.451073651072892 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 RGS4 ENSG00000117152 CDS Human protein_coding chr1:163044319 chr1:163044301 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_3361 0 0 0 1 163044285 163044307 mRNA hsa-miR-328 RGS4 miRanda miRanda
14034 chr1 165877146 165877146 1 + A G rs186355028 165877149 + 165877129 165877169 41 TGTACATACTGTTTCCTATGACATTACTGTATTTAAGAAAA TGTACATACTGTTTCCTGTGACATTACTGTATTTAAGAAAA < 41bp 1 0.759173521805647 1 0.986314058303833 experiment 0.481652956388706 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 UCK2 ENSG00000143179 UTR3 Human protein_coding chr1:165877149 chr1:165877146 . . 0 hm6A_associated_SNPs_3368 0 0 1 5 165877139 165877159 mRNA hsa-miR-101 UCK2 miRanda miRanda
14034 chr1 165877146 165877146 1 + A G rs186355028 165877149 + 165877129 165877169 41 TGTACATACTGTTTCCTATGACATTACTGTATTTAAGAAAA TGTACATACTGTTTCCTGTGACATTACTGTATTTAAGAAAA < 41bp 1 0.759173521805647 1 0.986314058303833 experiment 0.481652956388706 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 UCK2 ENSG00000143179 UTR3 Human protein_coding chr1:165877149 chr1:165877146 . . 0 hm6A_associated_SNPs_3368 0 0 1 5 165877143 165877161 mRNA hsa-miR-139-5p UCK2 miRanda miRanda
14034 chr1 165877146 165877146 1 + A G rs186355028 165877149 + 165877129 165877169 41 TGTACATACTGTTTCCTATGACATTACTGTATTTAAGAAAA TGTACATACTGTTTCCTGTGACATTACTGTATTTAAGAAAA < 41bp 1 0.759173521805647 1 0.986314058303833 experiment 0.481652956388706 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 UCK2 ENSG00000143179 UTR3 Human protein_coding chr1:165877149 chr1:165877146 . . 0 hm6A_associated_SNPs_3368 0 0 1 5 165877140 165877159 mRNA hsa-miR-144 UCK2 miRanda miRanda
14034 chr1 165877146 165877146 1 + A G rs186355028 165877149 + 165877129 165877169 41 TGTACATACTGTTTCCTATGACATTACTGTATTTAAGAAAA TGTACATACTGTTTCCTGTGACATTACTGTATTTAAGAAAA < 41bp 1 0.759173521805647 1 0.986314058303833 experiment 0.481652956388706 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 UCK2 ENSG00000143179 UTR3 Human protein_coding chr1:165877149 chr1:165877146 . . 0 hm6A_associated_SNPs_3368 0 0 1 5 165877130 165877150 mRNA hsa-miR-376a UCK2 miRanda miRanda
14034 chr1 165877146 165877146 1 + A G rs186355028 165877149 + 165877129 165877169 41 TGTACATACTGTTTCCTATGACATTACTGTATTTAAGAAAA TGTACATACTGTTTCCTGTGACATTACTGTATTTAAGAAAA < 41bp 1 0.759173521805647 1 0.986314058303833 experiment 0.481652956388706 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 UCK2 ENSG00000143179 UTR3 Human protein_coding chr1:165877149 chr1:165877146 . . 0 hm6A_associated_SNPs_3368 0 0 1 5 165877131 165877150 mRNA hsa-miR-376b UCK2 miRanda miRanda
14034 chr1 166823557 166823557 1 + C T rs147789881 166823556 + 166823536 166823576 41 CTGGGCTCATTCTTCCACTGACTTAATTATGATCTATGCCT CTGGGCTCATTCTTCCACTGATTTAATTATGATCTATGCCT Direct Loss 1 0.362470994567551 1 0.01834836602211 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 22 POGK ENSG00000143157 UTR3 Human protein_coding chr1:166823556 chr1:166823557 . . 0 hm6A_associated_SNPs_3374 0 0 1 1 166823540 166823560 mRNA hsa-miR-224 POGK miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550533 168550554 mRNA hsa-miR-148a XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550534 168550554 mRNA hsa-miR-152 XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550532 168550554 mRNA hsa-miR-302a XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550532 168550554 mRNA hsa-miR-302b XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550532 168550554 mRNA hsa-miR-302c XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550529 168550554 mRNA hsa-miR-302d XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550529 168550554 mRNA hsa-miR-372 XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550532 168550554 mRNA hsa-miR-373 XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550532 168550554 mRNA hsa-miR-148b XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550534 168550554 mRNA hsa-miR-520e XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550533 168550554 mRNA hsa-miR-520a-3p XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550535 168550554 mRNA hsa-miR-520b XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550534 168550554 mRNA hsa-miR-520c-3p XCL1 miRanda miRanda
14034 chr1 168550535 168550535 1 + A G rs1042882 168550520 + 168550500 168550540 41 TTCACTTTACACGCTCATGGACTGAGTTTATACTCACCTTT TTCACTTTACACGCTCATGGACTGAGTTTATACTCGCCTTT < 41bp 1 0.253731938311341 1 0.911473035812378 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 XCL1 ENSG00000143184 UTR3 Human protein_coding chr1:168550520 chr1:168550535 . . 0 hm6A_associated_SNPs_3391 0 0 1 14 168550534 168550554 mRNA hsa-miR-520d-3p XCL1 miRanda miRanda
14034 chr1 169101935 169101935 1 - C T rs1138486 169101921 - 169101901 169101941 41 TTGTCCGTTGTTTTAACCTGACTGAATACAAGATCAACAAG TTGTCCATTGTTTTAACCTGACTGAATACAAGATCAACAAG < 41bp 1 0.192517253580222 1 0.870993852615356 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 ATP1B1;NME7 ENSG00000143153;ENSG00000143156 UTR3 Human other chr1:169101921 chr1:169101935 . . 0 hm6A_associated_SNPs_3394 0 1 1 2 169101932 169101954 mRNA hsa-miR-191 NME7 miRanda miRanda
14034 chr1 169101935 169101935 1 - C T rs1138486 169101921 - 169101901 169101941 41 TTGTCCGTTGTTTTAACCTGACTGAATACAAGATCAACAAG TTGTCCATTGTTTTAACCTGACTGAATACAAGATCAACAAG < 41bp 1 0.192517253580222 1 0.870993852615356 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 ATP1B1;NME7 ENSG00000143153;ENSG00000143156 UTR3 Human other chr1:169101921 chr1:169101935 . . 0 hm6A_associated_SNPs_3394 0 1 1 2 169101922 169101943 mRNA hsa-miR-154 NME7 miRanda miRanda
14034 chr1 169773351 169773351 1 + G T rs143006454 169773352 + 169773332 169773372 41 CATGGACCCTTTAGTAGATGACAATGATGATATTTTGAATA CATGGACCCTTTAGTAGATTACAATGATGATATTTTGAATA Direct Loss 1 0.635042553216789 1 0.211050719022751 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 20 C1orf112 ENSG00000000460 CDS Human protein_coding chr1:169773352 chr1:169773351 nonsynonymous SNV 0.674 3 hm6A_associated_SNPs_3399 0 0 1 1 169773341 169773362 mRNA hsa-miR-23b C1orf112 miRanda miRanda
14034 chr1 171561017 171561017 1 + G A rs182877430 171561029 + 171561009 171561049 41 ATTGGGAGGGGGGCGGGAAAACATGGAGAATTAAGTCAGAT ATTGGGAGAGGGGCGGGAAAACATGGAGAATTAAGTCAGAT < 41bp 1 0.556139126707106 1 0.759561419487 experiment 0.887721746585787 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 PRRC2C ENSG00000117523 UTR3 Human protein_coding chr1:171561029 chr1:171561017 . . 0 hm6A_associated_SNPs_3415 0 0 1 2 171561013 171561036 mRNA hsa-miR-145 BAT2L2 miRanda miRanda
14034 chr1 171561017 171561017 1 + G A rs182877430 171561029 + 171561009 171561049 41 ATTGGGAGGGGGGCGGGAAAACATGGAGAATTAAGTCAGAT ATTGGGAGAGGGGCGGGAAAACATGGAGAATTAAGTCAGAT < 41bp 1 0.556139126707106 1 0.759561419487 experiment 0.887721746585787 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 PRRC2C ENSG00000117523 UTR3 Human protein_coding chr1:171561029 chr1:171561017 . . 0 hm6A_associated_SNPs_3415 0 0 1 2 171560995 171561017 mRNA hsa-miR-150 BAT2L2 miRanda miRanda
14034 chr1 173457376 173457376 1 + C T rs35364344 173457364 + 173457344 173457384 41 TGACTATCAATTTTTTTTTAACTGTCCTATCACGTCCTCTC TGACTATCAATTTTTTTTTAACTGTCCTATCATGTCCTCTC < 41bp 1 0.437506946484262 1 0.458703190088272 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 33 PRDX6 ENSG00000117592 UTR3 Human protein_coding chr1:173457364 chr1:173457376 . . 0 hm6A_associated_SNPs_3421 0 0 1 1 173457371 173457392 mRNA hsa-miR-542-3p PRDX6 miRanda miRanda
14034 chr1 173457377 173457377 1 + G A rs112926420 173457364 + 173457344 173457384 41 TGACTATCAATTTTTTTTTAACTGTCCTATCACGTCCTCTC TGACTATCAATTTTTTTTTAACTGTCCTATCACATCCTCTC < 41bp 1 0.441861350591656 1 0.496344000101089 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 PRDX6 ENSG00000117592 UTR3 Human protein_coding chr1:173457364 chr1:173457377 . . 0 hm6A_associated_SNPs_3422 0 0 1 1 173457371 173457392 mRNA hsa-miR-542-3p PRDX6 miRanda miRanda
14034 chr1 173755445 173755445 1 + T G rs41299593 173755441 + 173755421 173755461 41 ATCTTGGTTCTTTTATACAAACAATGTATCATTATCTTCAT ATCTTGGTTCTTTTATACAAACAAGGTATCATTATCTTCAT < 41bp 1 0.0853032294562881 1 0.0786091685295105 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 25 KLHL20 ENSG00000076321 UTR3 Human protein_coding chr1:173755441 chr1:173755445 . . 0 hm6A_associated_SNPs_3427 0 0 1 1 173755429 173755451 mRNA hsa-miR-221 KLHL20 miRanda miRanda
14034 chr1 174927212 174927212 1 + T G rs115619969 174927195 + 174927175 174927215 41 TGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTT TGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACGGTT < 41bp 1 0.277835128753647 1 0.940213322639465 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 RABGAP1L ENSG00000152061 UTR3 Human protein_coding chr1:174927195 chr1:174927212 . . 0 hm6A_associated_SNPs_3430 0 0 0 3 174927191 174927215 mRNA hsa-miR-181b RABGAP1L miRanda miRanda
14034 chr1 174927212 174927212 1 + T G rs115619969 174927195 + 174927175 174927215 41 TGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTT TGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACGGTT < 41bp 1 0.277835128753647 1 0.940213322639465 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 RABGAP1L ENSG00000152061 UTR3 Human protein_coding chr1:174927195 chr1:174927212 . . 0 hm6A_associated_SNPs_3430 0 0 0 3 174927207 174927227 mRNA hsa-miR-223 RABGAP1L miRanda miRanda
14034 chr1 174927212 174927212 1 + T G rs115619969 174927195 + 174927175 174927215 41 TGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTT TGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACGGTT < 41bp 1 0.277835128753647 1 0.940213322639465 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 RABGAP1L ENSG00000152061 UTR3 Human protein_coding chr1:174927195 chr1:174927212 . . 0 hm6A_associated_SNPs_3430 0 0 0 3 174927212 174927231 mRNA hsa-miR-599 RABGAP1L miRanda miRanda
14034 chr1 178444907 178444907 1 + G A rs12038910 178444890 + 178444870 178444910 41 TGAAAGATTTAATGCCCAAAACATTTGGACAGATTATGCAG TGAAAGATTTAATGCCCAAAACATTTGGACAGATTATACAG < 41bp 1 0.044847801178433 1 0.531148195266724 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 RASAL2 ENSG00000075391 UTR3 Human protein_coding chr1:178444890 chr1:178444907 . . 0 hm6A_associated_SNPs_3436 0 0 1 1 178444901 178444928 mRNA hsa-miR-490-3p RASAL2 miRanda miRanda
14034 chr1 178885791 178885791 1 + T C rs35017809 178885780 + 178885760 178885800 41 GAAAGGAAAACCAACATGAAACACCAAATAGTGTGTGTGAA GAAAGGAAAACCAACATGAAACACCAAATAGCGTGTGTGAA < 41bp 1 0.7627443659913 1 0.863568782806396 experiment 0.474511268017399 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 RALGPS2 ENSG00000116191 UTR3 Human protein_coding chr1:178885780 chr1:178885791 . . 0 hm6A_associated_SNPs_3438 0 0 1 2 178885776 178885798 mRNA hsa-miR-362-3p RALGPS2 miRanda miRanda
14034 chr1 178885791 178885791 1 + T C rs35017809 178885780 + 178885760 178885800 41 GAAAGGAAAACCAACATGAAACACCAAATAGTGTGTGTGAA GAAAGGAAAACCAACATGAAACACCAAATAGCGTGTGTGAA < 41bp 1 0.7627443659913 1 0.863568782806396 experiment 0.474511268017399 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 RALGPS2 ENSG00000116191 UTR3 Human protein_coding chr1:178885780 chr1:178885791 . . 0 hm6A_associated_SNPs_3438 0 0 1 2 178885781 178885800 mRNA hsa-miR-377 RALGPS2 miRanda miRanda
14034 chr1 178886266 178886266 1 + A C rs181567159 178886264 + 178886244 178886284 41 TTTTAAATAGGTTCCAGAAAACATGGTTGTTTCTAACTAGG TTTTAAATAGGTTCCAGAAAACCTGGTTGTTTCTAACTAGG < 41bp 1 0.0672393791560068 1 0.0243258476257324 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 RALGPS2 ENSG00000116191 UTR3 Human protein_coding chr1:178886264 chr1:178886266 . . 0 hm6A_associated_SNPs_3440 0 0 1 2 178886263 178886287 mRNA hsa-miR-10a RALGPS2 miRanda miRanda
14034 chr1 178886266 178886266 1 + A C rs181567159 178886264 + 178886244 178886284 41 TTTTAAATAGGTTCCAGAAAACATGGTTGTTTCTAACTAGG TTTTAAATAGGTTCCAGAAAACCTGGTTGTTTCTAACTAGG < 41bp 1 0.0672393791560068 1 0.0243258476257324 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 RALGPS2 ENSG00000116191 UTR3 Human protein_coding chr1:178886264 chr1:178886266 . . 0 hm6A_associated_SNPs_3440 0 0 1 2 178886263 178886287 mRNA hsa-miR-10b RALGPS2 miRanda miRanda
14034 chr1 178886268 178886268 1 + G A rs117639405 178886264 + 178886244 178886284 41 TTTTAAATAGGTTCCAGAAAACATGGTTGTTTCTAACTAGG TTTTAAATAGGTTCCAGAAAACATAGTTGTTTCTAACTAGG < 41bp 1 0.279889250035854 1 0.0221369564533234 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 RALGPS2 ENSG00000116191 UTR3 Human protein_coding chr1:178886264 chr1:178886268 . . 0 hm6A_associated_SNPs_3441 0 0 1 2 178886263 178886287 mRNA hsa-miR-10a RALGPS2 miRanda miRanda
14034 chr1 178886268 178886268 1 + G A rs117639405 178886264 + 178886244 178886284 41 TTTTAAATAGGTTCCAGAAAACATGGTTGTTTCTAACTAGG TTTTAAATAGGTTCCAGAAAACATAGTTGTTTCTAACTAGG < 41bp 1 0.279889250035854 1 0.0221369564533234 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 RALGPS2 ENSG00000116191 UTR3 Human protein_coding chr1:178886264 chr1:178886268 . . 0 hm6A_associated_SNPs_3441 0 0 1 2 178886263 178886287 mRNA hsa-miR-10b RALGPS2 miRanda miRanda
14034 chr1 179888022 179888022 1 + C T rs536906607 179888013 + 179887993 179888033 41 AGTCAAACATAGGTATATGAACTGTTAATCTTGGTGGATTC AGTCAAACATAGGTATATGAACTGTTAATTTTGGTGGATTC < 41bp 1 0.249994064963922 1 0.0223040282726288 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 TOR1AIP1 ENSG00000143337 UTR3 Human protein_coding chr1:179888013 chr1:179888022 . . 0 hm6A_associated_SNPs_3470 0 0 1 1 179888014 179888038 mRNA hsa-miR-191 TOR1AIP1 miRanda miRanda
14034 chr1 180080313 180080313 1 + C T rs16855289 180080296 + 180080276 180080316 41 GGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATCGAA GGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATTGAA < 41bp 1 0.718096366177123 1 0.853845059871674 experiment 0.563807267645753 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 38 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080296 chr1:180080313 . . 0 hm6A_associated_SNPs_3478 0 0 1 3 180080307 180080330 mRNA hsa-miR-25 CEP350 miRanda miRanda
14034 chr1 180080313 180080313 1 + C T rs16855289 180080296 + 180080276 180080316 41 GGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATCGAA GGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATTGAA < 41bp 1 0.718096366177123 1 0.853845059871674 experiment 0.563807267645753 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 38 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080296 chr1:180080313 . . 0 hm6A_associated_SNPs_3478 0 0 1 3 180080304 180080330 mRNA hsa-miR-96 CEP350 miRanda miRanda
14034 chr1 180080313 180080313 1 + C T rs16855289 180080296 + 180080276 180080316 41 GGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATCGAA GGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATTGAA < 41bp 1 0.718096366177123 1 0.853845059871674 experiment 0.563807267645753 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 38 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080296 chr1:180080313 . . 0 hm6A_associated_SNPs_3478 0 0 1 3 180080309 180080330 mRNA hsa-miR-1271 CEP350 miRanda miRanda
14034 chr1 180080759 180080759 1 + A C rs536460269 180080742 + 180080722 180080762 41 TAGTCTCTAAACAGTATTAAACCCTTAACCACTTCTAAAAT TAGTCTCTAAACAGTATTAAACCCTTAACCACTTCTACAAT < 41bp 1 0.32764981202895 1 0.0522449910640717 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080742 chr1:180080759 . . 0 hm6A_associated_SNPs_3479 0 0 1 3 180080750 180080772 mRNA hsa-miR-22 CEP350 miRanda miRanda
14034 chr1 180080759 180080759 1 + A C rs536460269 180080742 + 180080722 180080762 41 TAGTCTCTAAACAGTATTAAACCCTTAACCACTTCTAAAAT TAGTCTCTAAACAGTATTAAACCCTTAACCACTTCTACAAT < 41bp 1 0.32764981202895 1 0.0522449910640717 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080742 chr1:180080759 . . 0 hm6A_associated_SNPs_3479 0 0 1 3 180080759 180080785 mRNA hsa-miR-103 CEP350 miRanda miRanda
14034 chr1 180080759 180080759 1 + A C rs536460269 180080742 + 180080722 180080762 41 TAGTCTCTAAACAGTATTAAACCCTTAACCACTTCTAAAAT TAGTCTCTAAACAGTATTAAACCCTTAACCACTTCTACAAT < 41bp 1 0.32764981202895 1 0.0522449910640717 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080742 chr1:180080759 . . 0 hm6A_associated_SNPs_3479 0 0 1 3 180080759 180080785 mRNA hsa-miR-107 CEP350 miRanda miRanda
14034 chr1 180080759 180080759 1 + A C rs536460269 180080749 + 180080729 180080769 41 TAAACAGTATTAAACCCTTAACCACTTCTAAAATAGGCAAG TAAACAGTATTAAACCCTTAACCACTTCTACAATAGGCAAG < 41bp 1 0.249098023483983 1 0.00918060541152954 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080749 chr1:180080759 . . 0 hm6A_associated_SNPs_3480 0 0 1 3 180080750 180080772 mRNA hsa-miR-22 CEP350 miRanda miRanda
14034 chr1 180080759 180080759 1 + A C rs536460269 180080749 + 180080729 180080769 41 TAAACAGTATTAAACCCTTAACCACTTCTAAAATAGGCAAG TAAACAGTATTAAACCCTTAACCACTTCTACAATAGGCAAG < 41bp 1 0.249098023483983 1 0.00918060541152954 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080749 chr1:180080759 . . 0 hm6A_associated_SNPs_3480 0 0 1 3 180080759 180080785 mRNA hsa-miR-103 CEP350 miRanda miRanda
14034 chr1 180080759 180080759 1 + A C rs536460269 180080749 + 180080729 180080769 41 TAAACAGTATTAAACCCTTAACCACTTCTAAAATAGGCAAG TAAACAGTATTAAACCCTTAACCACTTCTACAATAGGCAAG < 41bp 1 0.249098023483983 1 0.00918060541152954 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180080749 chr1:180080759 . . 0 hm6A_associated_SNPs_3480 0 0 1 3 180080759 180080785 mRNA hsa-miR-107 CEP350 miRanda miRanda
14034 chr1 180081418 180081418 1 + A G rs191817895 180081422 + 180081402 180081442 41 TTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCA TTCATAGTCTTTGCACGGGAACCTGTGGTTTTAACAAACCA < 41bp 1 0.270142831024269 1 0.30322676897049 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180081422 chr1:180081418 . . 0 hm6A_associated_SNPs_3481 0 0 0 2 180081395 180081418 mRNA hsa-miR-19a CEP350 miRanda miRanda
14034 chr1 180081418 180081418 1 + A G rs191817895 180081422 + 180081402 180081442 41 TTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCA TTCATAGTCTTTGCACGGGAACCTGTGGTTTTAACAAACCA < 41bp 1 0.270142831024269 1 0.30322676897049 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 CEP350 ENSG00000135837 UTR3 Human protein_coding chr1:180081422 chr1:180081418 . . 0 hm6A_associated_SNPs_3481 0 0 0 2 180081395 180081418 mRNA hsa-miR-19b CEP350 miRanda miRanda
14034 chr1 180855012 180855012 1 + T G rs150835242 180855024 + 180855004 180855044 41 TAGAAAATTTTTATCAATTAACTGACAAATAGTTTCTTTTT TAGAAAATGTTTATCAATTAACTGACAAATAGTTTCTTTTT < 41bp 1 0.0621537636885461 1 0.12684640288353 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 XPR1 ENSG00000143324 UTR3 Human protein_coding chr1:180855024 chr1:180855012 . . 0 hm6A_associated_SNPs_3491 0 0 1 1 180855006 180855030 mRNA hsa-miR-223 XPR1 miRanda miRanda
14034 chr1 180855029 180855029 1 + C G rs79276843 180855024 + 180855004 180855044 41 TAGAAAATTTTTATCAATTAACTGACAAATAGTTTCTTTTT TAGAAAATTTTTATCAATTAACTGAGAAATAGTTTCTTTTT < 41bp 1 0.0627509365599186 1 0.129116535186768 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 XPR1 ENSG00000143324 UTR3 Human protein_coding chr1:180855024 chr1:180855029 . . 0 hm6A_associated_SNPs_3492 0 0 1 1 180855006 180855030 mRNA hsa-miR-223 XPR1 miRanda miRanda
14034 chr1 183111996 183111996 1 + C G rs112250010 183111993 + 183111973 183112013 41 TGAGGCCACAGAGTGCCTTGACACAAAGATTACATTTTTCA TGAGGCCACAGAGTGCCTTGACAGAAAGATTACATTTTTCA < 41bp 1 0.696444573274136 1 0.992570102214813 experiment 0.607110853451728 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 24 LAMC1 ENSG00000135862 UTR3 Human protein_coding chr1:183111993 chr1:183111996 . . 0 hm6A_associated_SNPs_3511 0 0 1 1 183111980 183111999 mRNA hsa-miR-599 LAMC1 miRanda miRanda
14034 chr1 183111996 183111996 1 + C G rs112250010 183112015 + 183111995 183112035 41 ACAAAGATTACATTTTTCAGACCCCCACTCCTCTGCTGCTG AGAAAGATTACATTTTTCAGACCCCCACTCCTCTGCTGCTG < 41bp 1 0.528045911952023 1 0.992261171340942 experiment 0.943908176095953 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 LAMC1 ENSG00000135862 UTR3 Human protein_coding chr1:183112015 chr1:183111996 . . 0 hm6A_associated_SNPs_3512 0 0 1 1 183111980 183111999 mRNA hsa-miR-599 LAMC1 miRanda miRanda
14034 chr1 183112612 183112612 1 + C G rs183701964 183112611 + 183112591 183112631 41 TTCTAGTATATTAATAATTGACTAGGAAGATGAACTTTTTT TTCTAGTATATTAATAATTGAGTAGGAAGATGAACTTTTTT Direct Loss 1 0.508256552414556 1 0.472211092710495 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 LAMC1 ENSG00000135862 UTR3 Human protein_coding chr1:183112611 chr1:183112612 . . 0 hm6A_associated_SNPs_3515 0 0 1 1 183112599 183112619 mRNA hsa-miR-384 LAMC1 miRanda miRanda
14034 chr1 183112612 183112612 1 + C G rs183701964 183112624 + 183112604 183112644 41 ATAATTGACTAGGAAGATGAACTTTTTTTCAGATCTTTGGG ATAATTGAGTAGGAAGATGAACTTTTTTTCAGATCTTTGGG < 41bp 1 0.572158042417972 1 0.881051242351532 experiment 0.855683915164056 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 LAMC1 ENSG00000135862 UTR3 Human protein_coding chr1:183112624 chr1:183112612 . . 0 hm6A_associated_SNPs_3516 0 0 1 1 183112599 183112619 mRNA hsa-miR-384 LAMC1 miRanda miRanda
14034 chr1 183212897 183212897 1 + T C rs6687880 183212913 + 183212893 183212933 41 CTTATTCTTTGAGTAATGTGACTAAAGGAAAAAACTTTGAC CTTACTCTTTGAGTAATGTGACTAAAGGAAAAAACTTTGAC < 41bp 1 0.253757914215246 1 0.563341379165649 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 LAMC2 ENSG00000058085 UTR3 Human protein_coding chr1:183212913 chr1:183212897 . . 0 hm6A_associated_SNPs_3519 1 0 0 3 183212893 183212914 mRNA hsa-miR-23a LAMC2 miRanda miRanda
14034 chr1 183212897 183212897 1 + T C rs6687880 183212913 + 183212893 183212933 41 CTTATTCTTTGAGTAATGTGACTAAAGGAAAAAACTTTGAC CTTACTCTTTGAGTAATGTGACTAAAGGAAAAAACTTTGAC < 41bp 1 0.253757914215246 1 0.563341379165649 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 LAMC2 ENSG00000058085 UTR3 Human protein_coding chr1:183212913 chr1:183212897 . . 0 hm6A_associated_SNPs_3519 1 0 0 3 183212893 183212914 mRNA hsa-miR-23b LAMC2 miRanda miRanda
14034 chr1 183212897 183212897 1 + T C rs6687880 183212913 + 183212893 183212933 41 CTTATTCTTTGAGTAATGTGACTAAAGGAAAAAACTTTGAC CTTACTCTTTGAGTAATGTGACTAAAGGAAAAAACTTTGAC < 41bp 1 0.253757914215246 1 0.563341379165649 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 LAMC2 ENSG00000058085 UTR3 Human protein_coding chr1:183212913 chr1:183212897 . . 0 hm6A_associated_SNPs_3519 1 0 0 3 183212882 183212903 mRNA hsa-miR-186 LAMC2 miRanda miRanda
14034 chr1 186390022 186390022 1 + G T rs145401556 186390042 + 186390022 186390062 41 GGAAGCACAATATATACCAAACATATATTTAAATAAAATCC TGAAGCACAATATATACCAAACATATATTTAAATAAAATCC < 41bp 1 0.430908287298276 1 0.0387088656425476 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 1 C1orf27 ENSG00000157181 UTR3 Human protein_coding chr1:186390042 chr1:186390022 . . 0 hm6A_associated_SNPs_3537 0 0 1 2 186390011 186390031 mRNA hsa-miR-218 C1orf27 miRanda miRanda
14034 chr1 186390022 186390022 1 + G T rs145401556 186390042 + 186390022 186390062 41 GGAAGCACAATATATACCAAACATATATTTAAATAAAATCC TGAAGCACAATATATACCAAACATATATTTAAATAAAATCC < 41bp 1 0.430908287298276 1 0.0387088656425476 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 1 C1orf27 ENSG00000157181 UTR3 Human protein_coding chr1:186390042 chr1:186390022 . . 0 hm6A_associated_SNPs_3537 0 0 1 2 186390022 186390044 mRNA hsa-miR-9 C1orf27 miRanda miRanda
14034 chr1 186390303 186390303 1 + A C rs8824 186390316 + 186390296 186390336 41 AGCACAAATTCAGTAAAGAGACTACAAAAGGATGATCTTCA AGCACAACTTCAGTAAAGAGACTACAAAAGGATGATCTTCA < 41bp 1 0.456843401027806 1 0.906976938247681 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 C1orf27 ENSG00000157181 UTR3 Human protein_coding chr1:186390316 chr1:186390303 . . 0 hm6A_associated_SNPs_3539 0 0 0 1 186390302 186390323 mRNA hsa-miR-599 C1orf27 miRanda miRanda
14034 chr1 186390315 186390315 1 + G T rs76453850 186390316 + 186390296 186390336 41 AGCACAAATTCAGTAAAGAGACTACAAAAGGATGATCTTCA AGCACAAATTCAGTAAAGATACTACAAAAGGATGATCTTCA Direct Loss 1 0.425066695759014 1 0.596085667610168 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 C1orf27 ENSG00000157181 UTR3 Human protein_coding chr1:186390316 chr1:186390315 . . 0 hm6A_associated_SNPs_3540 0 0 0 1 186390302 186390323 mRNA hsa-miR-599 C1orf27 miRanda miRanda
14034 chr1 192548461 192548461 1 + T A rs113090598 192548452 + 192548432 192548472 41 CAGGCTAATAGCCTAAAGTGACTGGTCCCTGGCTGAAGGGA CAGGCTAATAGCCTAAAGTGACTGGTCCCAGGCTGAAGGGA < 41bp 1 0.34849314187104 1 0.888242125511169 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 RGS1 ENSG00000090104 UTR3 Human protein_coding chr1:192548452 chr1:192548461 . . 0 hm6A_associated_SNPs_3542 0 0 0 2 192548453 192548473 mRNA hsa-miR-204 RGS1 miRanda miRanda
14034 chr1 192548461 192548461 1 + T A rs113090598 192548452 + 192548432 192548472 41 CAGGCTAATAGCCTAAAGTGACTGGTCCCTGGCTGAAGGGA CAGGCTAATAGCCTAAAGTGACTGGTCCCAGGCTGAAGGGA < 41bp 1 0.34849314187104 1 0.888242125511169 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 RGS1 ENSG00000090104 UTR3 Human protein_coding chr1:192548452 chr1:192548461 . . 0 hm6A_associated_SNPs_3542 0 0 0 2 192548453 192548473 mRNA hsa-miR-211 RGS1 miRanda miRanda
14034 chr1 197447140 197447140 1 + T C rs185292040 197447155 + 197447135 197447175 41 TTCCTTTGACCACCTTAAAAACTTTCACAGTGGTTCCGCTC TTCCTCTGACCACCTTAAAAACTTTCACAGTGGTTCCGCTC < 41bp 1 0.0432319301884192 1 0.963646769523621 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 CRB1 ENSG00000134376 UTR3 Human protein_coding chr1:197447155 chr1:197447140 . . 0 hm6A_associated_SNPs_3554 0 0 0 2 197447129 197447151 mRNA hsa-miR-18a CRB1 miRanda miRanda
14034 chr1 197447140 197447140 1 + T C rs185292040 197447155 + 197447135 197447175 41 TTCCTTTGACCACCTTAAAAACTTTCACAGTGGTTCCGCTC TTCCTCTGACCACCTTAAAAACTTTCACAGTGGTTCCGCTC < 41bp 1 0.0432319301884192 1 0.963646769523621 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 CRB1 ENSG00000134376 UTR3 Human protein_coding chr1:197447155 chr1:197447140 . . 0 hm6A_associated_SNPs_3554 0 0 0 2 197447129 197447151 mRNA hsa-miR-18b CRB1 miRanda miRanda
14034 chr1 198289177 198289177 1 + G A rs368728960 198289181 + 198289161 198289201 41 GATTCTTATGATAAATGTAGACACAAACTATTTGAGAAACA GATTCTTATGATAAATATAGACACAAACTATTTGAGAAACA < 41bp 1 0.272391187199737 1 0.900164186954498 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 17 NEK7 ENSG00000151414 UTR3 Human protein_coding chr1:198289181 chr1:198289177 . . 0 hm6A_associated_SNPs_3557 0 0 1 1 198289166 198289187 mRNA hsa-miR-599 NEK7 miRanda miRanda
14034 chr1 198290146 198290146 1 + A G rs116131984 198290150 + 198290130 198290170 41 GAGGAAGTCACTGTTAAAGGACTCTGTGCCATCTTACAACC GAGGAAGTCACTGTTAGAGGACTCTGTGCCATCTTACAACC < 41bp 1 0.243767984472718 1 0.989354610443115 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 17 NEK7 ENSG00000151414 UTR3 Human protein_coding chr1:198290150 chr1:198290146 . . 0 hm6A_associated_SNPs_3558 0 0 1 1 198290141 198290162 mRNA hsa-miR-183 NEK7 miRanda miRanda
14034 chr1 198290311 198290311 1 + A C rs542810948 198290303 + 198290283 198290323 41 ATGCTTTCAAGCATTTGTAAACTTAAAAAATGTATAAAGGG ATGCTTTCAAGCATTTGTAAACTTAAAACATGTATAAAGGG < 41bp 1 0.0686800618469571 1 0.751640558242798 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 NEK7 ENSG00000151414 UTR3 Human protein_coding chr1:198290303 chr1:198290311 . . 0 hm6A_associated_SNPs_3559 0 0 1 1 198290310 198290330 mRNA hsa-miR-129-5p NEK7 miRanda miRanda
14034 chr1 198290313 198290313 1 + T C rs560907442 198290303 + 198290283 198290323 41 ATGCTTTCAAGCATTTGTAAACTTAAAAAATGTATAAAGGG ATGCTTTCAAGCATTTGTAAACTTAAAAAACGTATAAAGGG < 41bp 1 0.0689735125958747 1 0.820721626281738 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 NEK7 ENSG00000151414 UTR3 Human protein_coding chr1:198290303 chr1:198290313 . . 0 hm6A_associated_SNPs_3560 0 0 1 1 198290310 198290330 mRNA hsa-miR-129-5p NEK7 miRanda miRanda
14034 chr1 200143660 200143660 1 + G A rs531645020 200143653 + 200143633 200143673 41 CACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGTATATT CACGGTCAGAAGAAAAACGGACAGAACAGTTCTTGTATATT < 41bp 1 0.164969169432148 1 0.98824018239975 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 28 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200143653 chr1:200143660 . . 0 hm6A_associated_SNPs_3563 0 0 0 3 200143651 200143671 mRNA hsa-miR-381 NR5A2 miRanda miRanda
14034 chr1 200143660 200143660 1 + G A rs531645020 200143653 + 200143633 200143673 41 CACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGTATATT CACGGTCAGAAGAAAAACGGACAGAACAGTTCTTGTATATT < 41bp 1 0.164969169432148 1 0.98824018239975 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 28 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200143653 chr1:200143660 . . 0 hm6A_associated_SNPs_3563 0 0 0 3 200143643 200143664 mRNA hsa-miR-451 NR5A2 miRanda miRanda
14034 chr1 200143660 200143660 1 + G A rs531645020 200143653 + 200143633 200143673 41 CACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGTATATT CACGGTCAGAAGAAAAACGGACAGAACAGTTCTTGTATATT < 41bp 1 0.164969169432148 1 0.98824018239975 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 28 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200143653 chr1:200143660 . . 0 hm6A_associated_SNPs_3563 0 0 0 3 200143649 200143671 mRNA hsa-miR-300 NR5A2 miRanda miRanda
14034 chr1 200143660 200143660 1 + G A rs531645020 200143677 + 200143657 200143697 41 AACGGTTCTTGTATATTTAAACTGATCTCCACTATGAAGAA AACAGTTCTTGTATATTTAAACTGATCTCCACTATGAAGAA < 41bp 1 0.0461735880305587 1 0.987356543540955 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 4 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200143677 chr1:200143660 . . 0 hm6A_associated_SNPs_3564 0 0 0 3 200143651 200143671 mRNA hsa-miR-381 NR5A2 miRanda miRanda
14034 chr1 200143660 200143660 1 + G A rs531645020 200143677 + 200143657 200143697 41 AACGGTTCTTGTATATTTAAACTGATCTCCACTATGAAGAA AACAGTTCTTGTATATTTAAACTGATCTCCACTATGAAGAA < 41bp 1 0.0461735880305587 1 0.987356543540955 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 4 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200143677 chr1:200143660 . . 0 hm6A_associated_SNPs_3564 0 0 0 3 200143643 200143664 mRNA hsa-miR-451 NR5A2 miRanda miRanda
14034 chr1 200143660 200143660 1 + G A rs531645020 200143677 + 200143657 200143697 41 AACGGTTCTTGTATATTTAAACTGATCTCCACTATGAAGAA AACAGTTCTTGTATATTTAAACTGATCTCCACTATGAAGAA < 41bp 1 0.0461735880305587 1 0.987356543540955 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 4 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200143677 chr1:200143660 . . 0 hm6A_associated_SNPs_3564 0 0 0 3 200143649 200143671 mRNA hsa-miR-300 NR5A2 miRanda miRanda
14034 chr1 200145533 200145533 1 + G A rs2246209 200145545 + 200145525 200145565 41 TTATCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGATCA TTATCTTCATGGCTCAAAGGACAATGCAAAATCGCCGATCA < 41bp 1 0.0935812353564475 1 0.818134963512421 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 9 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200145545 chr1:200145533 . . 0 hm6A_associated_SNPs_3565 0 0 1 2 200145533 200145553 mRNA hsa-miR-33a NR5A2 miRanda miRanda
14034 chr1 200145533 200145533 1 + G A rs2246209 200145545 + 200145525 200145565 41 TTATCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGATCA TTATCTTCATGGCTCAAAGGACAATGCAAAATCGCCGATCA < 41bp 1 0.0935812353564475 1 0.818134963512421 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 9 NR5A2 ENSG00000116833 UTR3 Human protein_coding chr1:200145545 chr1:200145533 . . 0 hm6A_associated_SNPs_3565 0 0 1 2 200145533 200145553 mRNA hsa-miR-33b NR5A2 miRanda miRanda
14034 chr1 200827806 200827806 1 + A G rs12733378 200827825 + 200827805 200827845 41 TATTATTCACTCAAGTATTAACATTCTCTATTAAATAAGAG TGTTATTCACTCAAGTATTAACATTCTCTATTAAATAAGAG < 41bp 1 0.439979062818585 1 0.281378418207169 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 CAMSAP2 ENSG00000118200 UTR3 Human protein_coding chr1:200827825 chr1:200827806 . . 0 hm6A_associated_SNPs_3572 0 0 1 1 200827801 200827824 mRNA hsa-miR-200b CAMSAP1L1 miRanda miRanda
14034 chr1 201938995 201938995 1 + C T rs7513 201939005 + 201938985 201939025 41 TGATCATCATCTCCTTGCGGACTTCTCTGCCTGGTTTTGTG TGATCATCATTTCCTTGCGGACTTCTCTGCCTGGTTTTGTG < 41bp 1 0.791226418499757 1 0.989038407802582 experiment 0.417547163000486 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 TIMM17A ENSG00000134375 UTR3 Human protein_coding chr1:201939005 chr1:201938995 . . 0 hm6A_associated_SNPs_3592 0 0 1 1 201938979 201938998 mRNA hsa-miR-143 TIMM17A miRanda miRanda
14034 chr1 201984670 201984670 1 + T C rs139865793 201984680 + 201984660 201984700 41 AGCCCTGGGGTTTGAAGCTGACTTTATAGCTGCAAGTGTAT AGCCCTGGGGCTTGAAGCTGACTTTATAGCTGCAAGTGTAT < 41bp 1 0.796352647519537 1 0.959879994392395 experiment 0.407294704960926 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 11 ELF3 ENSG00000249007 ncRNA_exonic Human sense_intronic chr1:201984680 chr1:201984670 . . 0 hm6A_associated_SNPs_3600 0 0 0 1 201984664 201984688 mRNA hsa-miR-340 ELF3 miRanda miRanda
14034 chr1 203277053 203277053 1 + G A rs12085417 203277054 + 203277034 203277074 41 TCAGGGGCATTCATGCCTGGACTTAAACAATACTATGTTAT TCAGGGGCATTCATGCCTGAACTTAAACAATACTATGTTAT < 41bp 1 0.348485270479075 1 0.250651955604553 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 20 BTG2 ENSG00000159388 UTR3 Human protein_coding chr1:203277054 chr1:203277053 . . 0 hm6A_associated_SNPs_3609 0 0 1 1 203277032 203277054 mRNA hsa-miR-338-3p BTG2 miRanda miRanda
14034 chr1 203277053 203277053 1 + G A rs12085417 203277060 + 203277040 203277080 41 GCATTCATGCCTGGACTTAAACAATACTATGTTATCTTTTC GCATTCATGCCTGAACTTAAACAATACTATGTTATCTTTTC < 41bp 1 0.266667153399205 1 0.0304338037967682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 BTG2 ENSG00000159388 UTR3 Human protein_coding chr1:203277060 chr1:203277053 . . 0 hm6A_associated_SNPs_3610 0 0 1 1 203277032 203277054 mRNA hsa-miR-338-3p BTG2 miRanda miRanda
14034 chr1 203822909 203822909 1 + T A rs140198290 203822928 + 203822908 203822948 41 ATTCTGCACAAGCAAAAATGACTGAAGTTTATGTATAGACA AATCTGCACAAGCAAAAATGACTGAAGTTTATGTATAGACA < 41bp 1 0.663411669435185 1 0.970355093479156 experiment 0.67317666112963 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 ZC3H11A ENSG00000058673 UTR3 Human protein_coding chr1:203822928 chr1:203822909 . . 0 hm6A_associated_SNPs_3622 0 0 1 2 203822895 203822917 mRNA hsa-miR-19a ZC3H11A miRanda miRanda
14034 chr1 203822909 203822909 1 + T A rs140198290 203822928 + 203822908 203822948 41 ATTCTGCACAAGCAAAAATGACTGAAGTTTATGTATAGACA AATCTGCACAAGCAAAAATGACTGAAGTTTATGTATAGACA < 41bp 1 0.663411669435185 1 0.970355093479156 experiment 0.67317666112963 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 ZC3H11A ENSG00000058673 UTR3 Human protein_coding chr1:203822928 chr1:203822909 . . 0 hm6A_associated_SNPs_3622 0 0 1 2 203822905 203822926 mRNA hsa-miR-129-5p ZC3H11A miRanda miRanda
14034 chr1 204519187 204519187 1 + C G rs4252745 204519200 + 204519180 204519220 41 AATGTTTCTGTCACCCCAAAACACTCCCTTCTGCCCCTCTT AATGTTTGTGTCACCCCAAAACACTCCCTTCTGCCCCTCTT < 41bp 1 0.474215859791546 1 0.000228703022003174 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 8 MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204519200 chr1:204519187 . . 0 hm6A_associated_SNPs_3631 0 0 1 3 204519186 204519207 mRNA hsa-miR-122 MDM4 miRanda miRanda
14034 chr1 204519187 204519187 1 + C G rs4252745 204519200 + 204519180 204519220 41 AATGTTTCTGTCACCCCAAAACACTCCCTTCTGCCCCTCTT AATGTTTGTGTCACCCCAAAACACTCCCTTCTGCCCCTCTT < 41bp 1 0.474215859791546 1 0.000228703022003174 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 8 MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204519200 chr1:204519187 . . 0 hm6A_associated_SNPs_3631 0 0 1 3 204519167 204519188 mRNA hsa-miR-494 MDM4 miRanda miRanda
14034 chr1 204519187 204519187 1 + C G rs4252745 204519200 + 204519180 204519220 41 AATGTTTCTGTCACCCCAAAACACTCCCTTCTGCCCCTCTT AATGTTTGTGTCACCCCAAAACACTCCCTTCTGCCCCTCTT < 41bp 1 0.474215859791546 1 0.000228703022003174 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 8 MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204519200 chr1:204519187 . . 0 hm6A_associated_SNPs_3631 0 0 1 3 204519173 204519194 mRNA hsa-miR-542-3p MDM4 miRanda miRanda
14034 chr1 206636939 206636939 1 + C A rs536674616 206636948 + 206636928 206636968 41 CTCTTTCAACCCTGTACATGACTCGTGTTCACCATCCCCTT CTCTTTCAACCATGTACATGACTCGTGTTCACCATCCCCTT < 41bp 1 0.45008443989639 1 0.769837021827698 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 SRGAP2 ENSG00000163486 UTR3 Human other chr1:206636948 chr1:206636939 . . 0 hm6A_associated_SNPs_3641 0 0 1 1 206636921 206636941 mRNA hsa-miR-296-3p SRGAP2 miRanda miRanda
14034 chr1 206906110 206906110 1 + C T rs57614552 206906102 + 206906082 206906122 41 CCACGGGAGGACAAGCAATAACTCTCTACAGGAATATATTT CCACGGGAGGACAAGCAATAACTCTCTATAGGAATATATTT < 41bp 1 0.783198596116846 1 0.993416547775269 experiment 0.433602807766307 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 29 MAPKAPK2 ENSG00000162889 UTR3 Human protein_coding chr1:206906102 chr1:206906110 . . 0 hm6A_associated_SNPs_3651 0 0 1 1 206906093 206906114 mRNA hsa-miR-486-5p MAPKAPK2 miRanda miRanda
14034 chr1 211547440 211547440 1 + T G rs536291154 211547426 + 211547406 211547446 41 GCAAATGGGCATTTATATAAACTTGTGATGTTTCTTGTCAG GCAAATGGGCATTTATATAAACTTGTGATGTTTCGTGTCAG < 41bp 1 0.403686394101116 1 0.328005373477936 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 TRAF5 ENSG00000082512 UTR3 Human protein_coding chr1:211547426 chr1:211547440 . . 0 hm6A_associated_SNPs_3662 0 0 1 2 211547434 211547458 mRNA hsa-miR-361-5p TRAF5 miRanda miRanda
14034 chr1 211547440 211547440 1 + T G rs536291154 211547426 + 211547406 211547446 41 GCAAATGGGCATTTATATAAACTTGTGATGTTTCTTGTCAG GCAAATGGGCATTTATATAAACTTGTGATGTTTCGTGTCAG < 41bp 1 0.403686394101116 1 0.328005373477936 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 TRAF5 ENSG00000082512 UTR3 Human protein_coding chr1:211547426 chr1:211547440 . . 0 hm6A_associated_SNPs_3662 0 0 1 2 211547420 211547440 mRNA hsa-miR-494 TRAF5 miRanda miRanda
14034 chr1 211605837 211605837 1 + C G rs112873809 211605828 + 211605808 211605848 41 ACTAAGTTCAGACTCATGAAACCAATCTTCAGATGCTCTGT ACTAAGTTCAGACTCATGAAACCAATCTTGAGATGCTCTGT < 41bp 1 0.0840681082736578 1 0.685163557529449 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 LINC00467 ENSG00000153363 ncRNA_exonic Human lincRNA chr1:211605828 chr1:211605837 . . 0 hm6A_associated_SNPs_3665 0 0 1 2 211605837 211605858 mRNA hsa-miR-299-3p C1orf97 miRanda miRanda
14034 chr1 211605837 211605837 1 + C G rs112873809 211605828 + 211605808 211605848 41 ACTAAGTTCAGACTCATGAAACCAATCTTCAGATGCTCTGT ACTAAGTTCAGACTCATGAAACCAATCTTGAGATGCTCTGT < 41bp 1 0.0840681082736578 1 0.685163557529449 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 LINC00467 ENSG00000153363 ncRNA_exonic Human lincRNA chr1:211605828 chr1:211605837 . . 0 hm6A_associated_SNPs_3665 0 0 1 2 211605833 211605854 lncRNA hsa-miR-299-5p LINC00467 miRanda starBase2
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277381 212277401 mRNA hsa-miR-23a DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277382 212277404 mRNA hsa-miR-25 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277383 212277404 mRNA hsa-miR-32 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277382 212277404 mRNA hsa-miR-92a DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277381 212277401 mRNA hsa-miR-23b DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277383 212277404 mRNA hsa-miR-363 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277383 212277404 mRNA hsa-miR-367 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277377 + 212277357 212277397 41 TTAATACAGAGAGTGTATAGACTGACTCTAAGTTAATAATG TTAATACAGAGAGTGTATAGACTGACTCTAATTTAATAATG < 41bp 1 0.210915834611121 1 0.831440687179565 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277377 chr1:212277388 . . 0 hm6A_associated_SNPs_3670 0 0 1 8 212277383 212277404 mRNA hsa-miR-92b DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277381 212277401 mRNA hsa-miR-23a DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277382 212277404 mRNA hsa-miR-25 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277383 212277404 mRNA hsa-miR-32 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277382 212277404 mRNA hsa-miR-92a DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277381 212277401 mRNA hsa-miR-23b DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277383 212277404 mRNA hsa-miR-363 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277383 212277404 mRNA hsa-miR-367 DTL miRanda miRanda
14034 chr1 212277388 212277388 1 + G T rs17018509 212277381 + 212277361 212277401 41 TACAGAGAGTGTATAGACTGACTCTAAGTTAATAATGTGCA TACAGAGAGTGTATAGACTGACTCTAATTTAATAATGTGCA < 41bp 1 0.225104498567862 1 0.778350949287415 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277381 chr1:212277388 . . 0 hm6A_associated_SNPs_3671 0 0 1 8 212277383 212277404 mRNA hsa-miR-92b DTL miRanda miRanda
14034 chr1 212277819 212277819 1 + A G rs569986988 212277838 + 212277818 212277858 41 TATTTGGTGTTTGTTTTTTGACTGTTGGGCTTTGGGAAGAT TGTTTGGTGTTTGTTTTTTGACTGTTGGGCTTTGGGAAGAT < 41bp 1 0.193419303945441 1 0.309206813573837 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 2 DTL ENSG00000143476 UTR3 Human protein_coding chr1:212277838 chr1:212277819 . . 0 hm6A_associated_SNPs_3672 0 0 1 1 212277812 212277833 mRNA hsa-miR-495 DTL miRanda miRanda
14034 chr1 212989356 212989356 1 + G A rs79978979 212989348 + 212989328 212989368 41 ACACTGATCTTAGATTTTTGACTTATGAGGCCAGTGGTTTA ACACTGATCTTAGATTTTTGACTTATGAAGCCAGTGGTTTA < 41bp 1 0.151957429671974 1 0.193068414926529 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TATDN3 ENSG00000203705 UTR3 Human protein_coding chr1:212989348 chr1:212989356 . . 0 hm6A_associated_SNPs_3677 0 0 1 2 212989342 212989363 mRNA hsa-miR-193a-3p TATDN3 miRanda miRanda
14034 chr1 212989356 212989356 1 + G A rs79978979 212989348 + 212989328 212989368 41 ACACTGATCTTAGATTTTTGACTTATGAGGCCAGTGGTTTA ACACTGATCTTAGATTTTTGACTTATGAAGCCAGTGGTTTA < 41bp 1 0.151957429671974 1 0.193068414926529 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TATDN3 ENSG00000203705 UTR3 Human protein_coding chr1:212989348 chr1:212989356 . . 0 hm6A_associated_SNPs_3677 0 0 1 2 212989342 212989363 mRNA hsa-miR-193b TATDN3 miRanda miRanda
14034 chr1 213446410 213446410 1 + A G rs546385830 213446425 + 213446405 213446445 41 AATACACTAAAAGTATATGAACAATGTCATCAATGAAACTT AATACGCTAAAAGTATATGAACAATGTCATCAATGAAACTT < 41bp 1 0.193105056374568 1 0.844742000102997 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 RPS6KC1 ENSG00000136643 UTR3 Human protein_coding chr1:213446425 chr1:213446410 . . 0 hm6A_associated_SNPs_3683 0 0 1 1 213446392 213446415 mRNA hsa-miR-142-3p RPS6KC1 miRanda miRanda
14034 chr1 214505469 214505469 1 + T C rs200825251 214505487 + 214505467 214505507 41 TGTCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT TGCCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT < 41bp 1 0.16134094092557 1 0.964638590812683 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214505487 chr1:214505469 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_3686 0 0 1 4 214505454 214505475 mRNA hsa-miR-15a SMYD2 miRanda miRanda
14034 chr1 214505469 214505469 1 + T C rs200825251 214505487 + 214505467 214505507 41 TGTCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT TGCCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT < 41bp 1 0.16134094092557 1 0.964638590812683 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214505487 chr1:214505469 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_3686 0 0 1 4 214505454 214505475 mRNA hsa-miR-15b SMYD2 miRanda miRanda
14034 chr1 214505469 214505469 1 + T C rs200825251 214505487 + 214505467 214505507 41 TGTCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT TGCCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT < 41bp 1 0.16134094092557 1 0.964638590812683 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214505487 chr1:214505469 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_3686 0 0 1 4 214505454 214505475 mRNA hsa-miR-424 SMYD2 miRanda miRanda
14034 chr1 214505469 214505469 1 + T C rs200825251 214505487 + 214505467 214505507 41 TGTCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT TGCCTGCTTGTACATGCAGGACTGGGAAGGAGCCCTGCAAT < 41bp 1 0.16134094092557 1 0.964638590812683 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214505487 chr1:214505469 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_3686 0 0 1 4 214505455 214505475 mRNA hsa-miR-497 SMYD2 miRanda miRanda
14034 chr1 214510266 214510266 1 + C T rs78080241 214510260 + 214510240 214510280 41 AAAATACTTCTTGCACTTAAACACTGCACATGCCGTACTTT AAAATACTTCTTGCACTTAAACACTGTACATGCCGTACTTT < 41bp 1 0.563365471725748 1 0.370187908411026 experiment 0.873269056548505 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 27 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510260 chr1:214510266 . . 0 hm6A_associated_SNPs_3687 0 0 1 2 214510251 214510274 mRNA hsa-miR-449a SMYD2 miRanda miRanda
14034 chr1 214510266 214510266 1 + C T rs78080241 214510260 + 214510240 214510280 41 AAAATACTTCTTGCACTTAAACACTGCACATGCCGTACTTT AAAATACTTCTTGCACTTAAACACTGTACATGCCGTACTTT < 41bp 1 0.563365471725748 1 0.370187908411026 experiment 0.873269056548505 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 27 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510260 chr1:214510266 . . 0 hm6A_associated_SNPs_3687 0 0 1 2 214510251 214510274 mRNA hsa-miR-449b SMYD2 miRanda miRanda
14034 chr1 214510274 214510274 1 + G A rs113803011 214510260 + 214510240 214510280 41 AAAATACTTCTTGCACTTAAACACTGCACATGCCGTACTTT AAAATACTTCTTGCACTTAAACACTGCACATGCCATACTTT < 41bp 1 0.569480844406437 1 0.241808444261551 experiment 0.861038311187126 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 35 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510260 chr1:214510274 . . 0 hm6A_associated_SNPs_3688 0 0 1 2 214510251 214510274 mRNA hsa-miR-449a SMYD2 miRanda miRanda
14034 chr1 214510274 214510274 1 + G A rs113803011 214510260 + 214510240 214510280 41 AAAATACTTCTTGCACTTAAACACTGCACATGCCGTACTTT AAAATACTTCTTGCACTTAAACACTGCACATGCCATACTTT < 41bp 1 0.569480844406437 1 0.241808444261551 experiment 0.861038311187126 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 35 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510260 chr1:214510274 . . 0 hm6A_associated_SNPs_3688 0 0 1 2 214510251 214510274 mRNA hsa-miR-449b SMYD2 miRanda miRanda
14034 chr1 214510306 214510306 1 + A T rs554234048 214510301 + 214510281 214510321 41 GAGGTTAGTCTGAATCTTGAACTTTAATACCAAATTAATTT GAGGTTAGTCTGAATCTTGAACTTTTATACCAAATTAATTT < 41bp 1 0.501842986384112 1 0.846616387367249 experiment 0.996314027231776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 26 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510301 chr1:214510306 . . 0 hm6A_associated_SNPs_3689 0 0 1 5 214510305 214510329 mRNA hsa-miR-181a SMYD2 miRanda miRanda
14034 chr1 214510306 214510306 1 + A T rs554234048 214510301 + 214510281 214510321 41 GAGGTTAGTCTGAATCTTGAACTTTAATACCAAATTAATTT GAGGTTAGTCTGAATCTTGAACTTTTATACCAAATTAATTT < 41bp 1 0.501842986384112 1 0.846616387367249 experiment 0.996314027231776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 26 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510301 chr1:214510306 . . 0 hm6A_associated_SNPs_3689 0 0 1 5 214510305 214510329 mRNA hsa-miR-181b SMYD2 miRanda miRanda
14034 chr1 214510306 214510306 1 + A T rs554234048 214510301 + 214510281 214510321 41 GAGGTTAGTCTGAATCTTGAACTTTAATACCAAATTAATTT GAGGTTAGTCTGAATCTTGAACTTTTATACCAAATTAATTT < 41bp 1 0.501842986384112 1 0.846616387367249 experiment 0.996314027231776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 26 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510301 chr1:214510306 . . 0 hm6A_associated_SNPs_3689 0 0 1 5 214510295 214510316 mRNA hsa-miR-9 SMYD2 miRanda miRanda
14034 chr1 214510306 214510306 1 + A T rs554234048 214510301 + 214510281 214510321 41 GAGGTTAGTCTGAATCTTGAACTTTAATACCAAATTAATTT GAGGTTAGTCTGAATCTTGAACTTTTATACCAAATTAATTT < 41bp 1 0.501842986384112 1 0.846616387367249 experiment 0.996314027231776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 26 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510301 chr1:214510306 . . 0 hm6A_associated_SNPs_3689 0 0 1 5 214510283 214510310 mRNA hsa-miR-340 SMYD2 miRanda miRanda
14034 chr1 214510306 214510306 1 + A T rs554234048 214510301 + 214510281 214510321 41 GAGGTTAGTCTGAATCTTGAACTTTAATACCAAATTAATTT GAGGTTAGTCTGAATCTTGAACTTTTATACCAAATTAATTT < 41bp 1 0.501842986384112 1 0.846616387367249 experiment 0.996314027231776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 26 SMYD2 ENSG00000143499 UTR3 Human protein_coding chr1:214510301 chr1:214510306 . . 0 hm6A_associated_SNPs_3689 0 0 1 5 214510305 214510329 mRNA hsa-miR-181d SMYD2 miRanda miRanda
14034 chr1 215794785 215794785 1 + A C rs77914839 215794802 + 215794782 215794822 41 ATCATGATAATTAAATTAAAACACTAGTTTGTTCACTTGTA ATCCTGATAATTAAATTAAAACACTAGTTTGTTCACTTGTA < 41bp 1 0.188691965121759 1 0.0899813771247864 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 KCTD3 ENSG00000136636 UTR3 Human protein_coding chr1:215794802 chr1:215794785 . . 0 hm6A_associated_SNPs_3719 0 0 1 1 215794768 215794789 mRNA hsa-miR-433 KCTD3 miRanda miRanda
14034 chr1 215794808 215794808 1 + G T rs3767251 215794802 + 215794782 215794822 41 ATCATGATAATTAAATTAAAACACTAGTTTGTTCACTTGTA ATCATGATAATTAAATTAAAACACTATTTTGTTCACTTGTA < 41bp 1 0.184552696256216 1 0.0877523422241211 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 KCTD3 ENSG00000136636 UTR3 Human protein_coding chr1:215794802 chr1:215794808 . . 0 hm6A_associated_SNPs_3720 0 0 1 1 215794795 215794815 mRNA hsa-miR-495 KCTD3 miRanda miRanda
14034 chr1 215794808 215794808 1 + G T rs3767251 215794825 + 215794805 215794845 41 CTAGTTTGTTCACTTGTAGGACTGCAGTTCTGAATTTTGGG CTATTTTGTTCACTTGTAGGACTGCAGTTCTGAATTTTGGG < 41bp 1 0.170632910553131 1 0.365292102098465 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 4 KCTD3 ENSG00000136636 UTR3 Human protein_coding chr1:215794825 chr1:215794808 . . 0 hm6A_associated_SNPs_3721 0 0 1 1 215794795 215794815 mRNA hsa-miR-495 KCTD3 miRanda miRanda
14034 chr1 218615298 218615298 1 + G A rs146035327 218615284 + 218615264 218615304 41 ACTCATGGATGGCTTAAGGAACTTGAACTCAAACGAGCCAG ACTCATGGATGGCTTAAGGAACTTGAACTCAAACAAGCCAG < 41bp 1 0.248178726978599 1 0.990135729312897 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 MIR548F3 ENSG00000092969 UTR3 Human protein_coding chr1:218615284 chr1:218615298 . . 0 hm6A_associated_SNPs_3726 0 0 0 1 218615282 218615305 mRNA hsa-miR-149 TGFB2 miRanda miRanda
14034 chr1 218615298 218615298 1 + G A rs146035327 218615290 + 218615270 218615310 41 GGATGGCTTAAGGAACTTGAACTCAAACGAGCCAGAAAAAA GGATGGCTTAAGGAACTTGAACTCAAACAAGCCAGAAAAAA < 41bp 1 0.240230872119737 1 0.988900423049927 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 MIR548F3 ENSG00000092969 UTR3 Human protein_coding chr1:218615290 chr1:218615298 . . 0 hm6A_associated_SNPs_3727 0 0 0 1 218615282 218615305 mRNA hsa-miR-149 TGFB2 miRanda miRanda
14034 chr1 220986848 220986848 1 + G C rs566571959 220986843 + 220986823 220986863 41 TTGAAGCATGGTGTTTCAGAACTGAGACCTCTACATTTTCT TTGAAGCATGGTGTTTCAGAACTGACACCTCTACATTTTCT < 41bp 1 0.631603074554047 1 0.941945672035217 experiment 0.736793850891905 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MARC1 ENSG00000186205 UTR3 Human protein_coding chr1:220986843 chr1:220986848 . . 0 hm6A_associated_SNPs_3744 0 0 1 1 220986845 220986866 mRNA hsa-miR-186 MOSC1 miRanda miRanda
14034 chr1 220987695 220987695 1 + G A rs547061532 220987679 + 220987659 220987699 41 TTGATTATATTGGGAAGTTGACTAAACTTGAAAAATGTTTT TTGATTATATTGGGAAGTTGACTAAACTTGAAAAATATTTT < 41bp 1 0.104252535598947 1 0.641377389431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 MARC1 ENSG00000186205 UTR3 Human protein_coding chr1:220987679 chr1:220987695 . . 0 hm6A_associated_SNPs_3747 0 0 1 3 220987692 220987711 mRNA hsa-miR-27a MOSC1 miRanda miRanda
14034 chr1 220987695 220987695 1 + G A rs547061532 220987679 + 220987659 220987699 41 TTGATTATATTGGGAAGTTGACTAAACTTGAAAAATGTTTT TTGATTATATTGGGAAGTTGACTAAACTTGAAAAATATTTT < 41bp 1 0.104252535598947 1 0.641377389431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 MARC1 ENSG00000186205 UTR3 Human protein_coding chr1:220987679 chr1:220987695 . . 0 hm6A_associated_SNPs_3747 0 0 1 3 220987692 220987711 mRNA hsa-miR-27b MOSC1 miRanda miRanda
14034 chr1 220987695 220987695 1 + G A rs547061532 220987679 + 220987659 220987699 41 TTGATTATATTGGGAAGTTGACTAAACTTGAAAAATGTTTT TTGATTATATTGGGAAGTTGACTAAACTTGAAAAATATTTT < 41bp 1 0.104252535598947 1 0.641377389431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 MARC1 ENSG00000186205 UTR3 Human protein_coding chr1:220987679 chr1:220987695 . . 0 hm6A_associated_SNPs_3747 0 0 1 3 220987690 220987710 mRNA hsa-miR-128 MOSC1 miRanda miRanda
14034 chr1 221058296 221058296 1 + G T rs142138538 221058311 + 221058291 221058331 41 ACTGTGAGGTGTTTGACTAAACTGTTTCTCTGACTCGCCCC ACTGTTAGGTGTTTGACTAAACTGTTTCTCTGACTCGCCCC < 41bp 1 0.39331603149364 1 0.951439023017883 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 HLX ENSG00000136630 UTR3 Human protein_coding chr1:221058311 chr1:221058296 . . 0 hm6A_associated_SNPs_3750 0 0 1 2 221058275 221058297 mRNA hsa-miR-128 HLX miRanda miRanda
14034 chr1 221058296 221058296 1 + G T rs142138538 221058311 + 221058291 221058331 41 ACTGTGAGGTGTTTGACTAAACTGTTTCTCTGACTCGCCCC ACTGTTAGGTGTTTGACTAAACTGTTTCTCTGACTCGCCCC < 41bp 1 0.39331603149364 1 0.951439023017883 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 HLX ENSG00000136630 UTR3 Human protein_coding chr1:221058311 chr1:221058296 . . 0 hm6A_associated_SNPs_3750 0 0 1 2 221058286 221058308 mRNA hsa-miR-505 HLX miRanda miRanda
14034 chr1 222906029 222906029 1 + A G rs147602368 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAGAAGGACA < 41bp 1 0.775072763094057 1 0.835027098655701 experiment 0.449854473811886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906029 synonymous SNV . 0 hm6A_associated_SNPs_3755 0 0 1 5 222906025 222906046 mRNA hsa-miR-29a C1orf58 miRanda miRanda
14034 chr1 222906029 222906029 1 + A G rs147602368 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAGAAGGACA < 41bp 1 0.775072763094057 1 0.835027098655701 experiment 0.449854473811886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906029 synonymous SNV . 0 hm6A_associated_SNPs_3755 0 0 1 5 222906024 222906046 mRNA hsa-miR-29b C1orf58 miRanda miRanda
14034 chr1 222906029 222906029 1 + A G rs147602368 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAGAAGGACA < 41bp 1 0.775072763094057 1 0.835027098655701 experiment 0.449854473811886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906029 synonymous SNV . 0 hm6A_associated_SNPs_3755 0 0 1 5 222906019 222906041 mRNA hsa-miR-199a-5p C1orf58 miRanda miRanda
14034 chr1 222906029 222906029 1 + A G rs147602368 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAGAAGGACA < 41bp 1 0.775072763094057 1 0.835027098655701 experiment 0.449854473811886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906029 synonymous SNV . 0 hm6A_associated_SNPs_3755 0 0 1 5 222906019 222906041 mRNA hsa-miR-199b-5p C1orf58 miRanda miRanda
14034 chr1 222906029 222906029 1 + A G rs147602368 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAGAAGGACA < 41bp 1 0.775072763094057 1 0.835027098655701 experiment 0.449854473811886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906029 synonymous SNV . 0 hm6A_associated_SNPs_3755 0 0 1 5 222906025 222906046 mRNA hsa-miR-29c C1orf58 miRanda miRanda
14034 chr1 223962919 223962919 1 + A C rs28370178 223962905 + 223962885 223962925 41 AAAATGCAGGGAGGTATTTAACAGCTGAGCAAAAACATTGA AAAATGCAGGGAGGTATTTAACAGCTGAGCAAAACCATTGA < 41bp 1 0.342521840871816 1 0.706884145736694 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 CAPN2 ENSG00000162909 UTR3 Human protein_coding chr1:223962905 chr1:223962919 . . 0 hm6A_associated_SNPs_3765 0 0 1 1 223962899 223962920 mRNA hsa-miR-129-5p CAPN2 miRanda miRanda
14034 chr1 224380389 224380389 1 + T A rs541547942 224380387 + 224380367 224380407 41 TCACTCACAGGAAACTTGTGACTTGTGTATTATCGTCATTG TCACTCACAGGAAACTTGTGACATGTGTATTATCGTCATTG < 41bp 1 0.596022852620028 1 0.234831362962723 experiment 0.807954294759944 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380387 chr1:224380389 . . 0 hm6A_associated_SNPs_3782 0 0 1 1 224380373 224380391 mRNA hsa-miR-224 DEGS1 miRanda miRanda
14034 chr1 224380400 224380400 1 + C T rs145159432 224380387 + 224380367 224380407 41 TCACTCACAGGAAACTTGTGACTTGTGTATTATCGTCATTG TCACTCACAGGAAACTTGTGACTTGTGTATTATTGTCATTG < 41bp 1 0.444007405371049 1 0.211367696523666 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380387 chr1:224380400 . . 0 hm6A_associated_SNPs_3783 0 0 1 6 224380399 224380420 mRNA hsa-miR-30a DEGS1 miRanda miRanda
14034 chr1 224380400 224380400 1 + C T rs145159432 224380387 + 224380367 224380407 41 TCACTCACAGGAAACTTGTGACTTGTGTATTATCGTCATTG TCACTCACAGGAAACTTGTGACTTGTGTATTATTGTCATTG < 41bp 1 0.444007405371049 1 0.211367696523666 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380387 chr1:224380400 . . 0 hm6A_associated_SNPs_3783 0 0 1 6 224380398 224380420 mRNA hsa-miR-30c DEGS1 miRanda miRanda
14034 chr1 224380400 224380400 1 + C T rs145159432 224380387 + 224380367 224380407 41 TCACTCACAGGAAACTTGTGACTTGTGTATTATCGTCATTG TCACTCACAGGAAACTTGTGACTTGTGTATTATTGTCATTG < 41bp 1 0.444007405371049 1 0.211367696523666 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380387 chr1:224380400 . . 0 hm6A_associated_SNPs_3783 0 0 1 6 224380399 224380420 mRNA hsa-miR-30d DEGS1 miRanda miRanda
14034 chr1 224380400 224380400 1 + C T rs145159432 224380387 + 224380367 224380407 41 TCACTCACAGGAAACTTGTGACTTGTGTATTATCGTCATTG TCACTCACAGGAAACTTGTGACTTGTGTATTATTGTCATTG < 41bp 1 0.444007405371049 1 0.211367696523666 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380387 chr1:224380400 . . 0 hm6A_associated_SNPs_3783 0 0 1 6 224380399 224380420 mRNA hsa-miR-30b DEGS1 miRanda miRanda
14034 chr1 224380400 224380400 1 + C T rs145159432 224380387 + 224380367 224380407 41 TCACTCACAGGAAACTTGTGACTTGTGTATTATCGTCATTG TCACTCACAGGAAACTTGTGACTTGTGTATTATTGTCATTG < 41bp 1 0.444007405371049 1 0.211367696523666 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380387 chr1:224380400 . . 0 hm6A_associated_SNPs_3783 0 0 1 6 224380399 224380420 mRNA hsa-miR-30e DEGS1 miRanda miRanda
14034 chr1 224380400 224380400 1 + C T rs145159432 224380387 + 224380367 224380407 41 TCACTCACAGGAAACTTGTGACTTGTGTATTATCGTCATTG TCACTCACAGGAAACTTGTGACTTGTGTATTATTGTCATTG < 41bp 1 0.444007405371049 1 0.211367696523666 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380387 chr1:224380400 . . 0 hm6A_associated_SNPs_3783 0 0 1 6 224380396 224380418 mRNA hsa-miR-494 DEGS1 miRanda miRanda
14034 chr1 224564448 224564448 1 + T G rs538977916 224564454 + 224564434 224564474 41 AAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAA AAATGCAAGCCATTGCATGGACATAGCAATATACAACCAAA < 41bp 1 0.382342828069639 1 0.807479441165924 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 CNIH4 ENSG00000143771 UTR3 Human protein_coding chr1:224564454 chr1:224564448 . . 0 hm6A_associated_SNPs_3787 0 0 1 1 224564443 224564465 mRNA hsa-miR-137 CNIH4 miRanda miRanda
14034 chr1 225977273 225977273 1 + C G rs12043546 225977272 + 225977252 225977292 41 TATTTACTTTTGGAAATTGAACAAGAAATGCATCTGTCTTA TATTTACTTTTGGAAATTGAAGAAGAAATGCATCTGTCTTA Direct Loss 1 0.598196002933892 1 0.756478250026703 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 22 SRP9 ENSG00000143742 UTR3 Human protein_coding chr1:225977272 chr1:225977273 . . 0 hm6A_associated_SNPs_3793 0 0 1 1 225977255 225977276 mRNA hsa-miR-375 SRP9 miRanda miRanda
14034 chr1 225977945 225977945 1 + T C rs191367978 225977929 + 225977909 225977949 41 TAACCAAGGTGTTAGGTGTGACTGTCACAACTGTTATGTTT TAACCAAGGTGTTAGGTGTGACTGTCACAACTGTTACGTTT < 41bp 1 0.228893248166256 1 0.481903970241547 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 SRP9 ENSG00000143742 UTR3 Human protein_coding chr1:225977929 chr1:225977945 . . 0 hm6A_associated_SNPs_3794 0 0 1 1 225977925 225977949 mRNA hsa-miR-495 SRP9 miRanda miRanda
14034 chr1 227842159 227842159 1 + T C rs151083594 227842157 + 227842137 227842177 41 CAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAG CAATTTGCACTTAGTGAAAGACCGGAGAACTGTGAATGAAG < 41bp 1 0.639754027845714 1 0.973293781280518 experiment 0.720491944308572 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842157 chr1:227842159 nonsynonymous SNV 0.011 0 hm6A_associated_SNPs_3803 0 0 1 4 227842152 227842172 mRNA hsa-miR-27a ZNF678 miRanda miRanda
14034 chr1 227842159 227842159 1 + T C rs151083594 227842157 + 227842137 227842177 41 CAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAG CAATTTGCACTTAGTGAAAGACCGGAGAACTGTGAATGAAG < 41bp 1 0.639754027845714 1 0.973293781280518 experiment 0.720491944308572 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842157 chr1:227842159 nonsynonymous SNV 0.011 0 hm6A_associated_SNPs_3803 0 0 1 4 227842159 227842177 mRNA hsa-miR-205 ZNF678 miRanda miRanda
14034 chr1 227842159 227842159 1 + T C rs151083594 227842157 + 227842137 227842177 41 CAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAG CAATTTGCACTTAGTGAAAGACCGGAGAACTGTGAATGAAG < 41bp 1 0.639754027845714 1 0.973293781280518 experiment 0.720491944308572 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842157 chr1:227842159 nonsynonymous SNV 0.011 0 hm6A_associated_SNPs_3803 0 0 1 4 227842152 227842172 mRNA hsa-miR-27b ZNF678 miRanda miRanda
14034 chr1 227842159 227842159 1 + T C rs151083594 227842157 + 227842137 227842177 41 CAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAG CAATTTGCACTTAGTGAAAGACCGGAGAACTGTGAATGAAG < 41bp 1 0.639754027845714 1 0.973293781280518 experiment 0.720491944308572 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842157 chr1:227842159 nonsynonymous SNV 0.011 0 hm6A_associated_SNPs_3803 0 0 1 4 227842150 227842172 mRNA hsa-miR-145 ZNF678 miRanda miRanda
14034 chr1 227919448 227919448 1 - G A rs117402061 227919435 - 227919415 227919455 41 TCCTCACCTGGGCCTGAGGGACTGTGCCTGCTGTGCACTCA TCCTCACTTGGGCCTGAGGGACTGTGCCTGCTGTGCACTCA < 41bp 1 0.753853112947053 1 0.880641937255859 experiment 0.492293774105894 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 SNAP47;JMJD4 ENSG00000081692 UTR3 Human protein_coding chr1:227919435 chr1:227919448 . . 0 hm6A_associated_SNPs_3811 0 0 1 1 227919445 227919465 mRNA hsa-miR-125a-3p JMJD4 miRanda miRanda
14034 chr1 228286881 228286881 1 + T C rs149161835 228286865 + 228286845 228286885 41 TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTATAGCT TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTACAGCT < 41bp 1 0.598134302040755 1 0.929357767105103 experiment 0.80373139591849 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 37 ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286865 chr1:228286881 . . 0 hm6A_associated_SNPs_3821 0 0 1 4 228286868 228286890 mRNA hsa-miR-155 ARF1 miRanda miRanda
14034 chr1 228286881 228286881 1 + T C rs149161835 228286865 + 228286845 228286885 41 TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTATAGCT TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTACAGCT < 41bp 1 0.598134302040755 1 0.929357767105103 experiment 0.80373139591849 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 37 ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286865 chr1:228286881 . . 0 hm6A_associated_SNPs_3821 0 0 1 4 228286862 228286883 mRNA hsa-miR-374a ARF1 miRanda miRanda
14034 chr1 228286881 228286881 1 + T C rs149161835 228286865 + 228286845 228286885 41 TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTATAGCT TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTACAGCT < 41bp 1 0.598134302040755 1 0.929357767105103 experiment 0.80373139591849 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 37 ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286865 chr1:228286881 . . 0 hm6A_associated_SNPs_3821 0 0 1 4 228286879 228286900 mRNA hsa-miR-590-3p ARF1 miRanda miRanda
14034 chr1 228286881 228286881 1 + T C rs149161835 228286865 + 228286845 228286885 41 TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTATAGCT TTCAGTTTTCATTTCGACAAACAAGCACTGTAATTACAGCT < 41bp 1 0.598134302040755 1 0.929357767105103 experiment 0.80373139591849 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 37 ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286865 chr1:228286881 . . 0 hm6A_associated_SNPs_3821 0 0 1 4 228286862 228286883 mRNA hsa-miR-374b ARF1 miRanda miRanda
14034 chr1 230398716 230398716 1 + C T rs151097882 230398698 + 230398678 230398718 41 AGATTGGAGCTTAGGAAGAAACTCAGCTGCAAGCCTTTCAA AGATTGGAGCTTAGGAAGAAACTCAGCTGCAAGCCTTTTAA < 41bp 1 0.24806070786368 1 0.0138735473155975 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230398698 chr1:230398716 synonymous SNV . 0 hm6A_associated_SNPs_3849 0 0 1 1 230398698 230398718 mRNA hsa-miR-488 GALNT2 miRanda miRanda
14034 chr1 230415293 230415293 1 + C T rs2273967 230415287 + 230415267 230415307 41 TTATTGATTATGTTTCTTAAACTTTCCGCGAAACTAATATA TTATTGATTATGTTTCTTAAACTTTCTGCGAAACTAATATA < 41bp 1 0.795011255315237 1 0.981275677680969 experiment 0.409977489369527 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415287 chr1:230415293 . . 0 hm6A_associated_SNPs_3851 0 0 1 2 230415289 230415311 mRNA hsa-miR-154 GALNT2 miRanda miRanda
14034 chr1 230415293 230415293 1 + C T rs2273967 230415287 + 230415267 230415307 41 TTATTGATTATGTTTCTTAAACTTTCCGCGAAACTAATATA TTATTGATTATGTTTCTTAAACTTTCTGCGAAACTAATATA < 41bp 1 0.795011255315237 1 0.981275677680969 experiment 0.409977489369527 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415287 chr1:230415293 . . 0 hm6A_associated_SNPs_3851 0 0 1 2 230415293 230415312 mRNA hsa-miR-202 GALNT2 miRanda miRanda
14034 chr1 230415293 230415293 1 + C T rs2273967 230415299 + 230415279 230415319 41 TTTCTTAAACTTTCCGCGAAACTAATATACCTCAGTATTCC TTTCTTAAACTTTCTGCGAAACTAATATACCTCAGTATTCC < 41bp 1 0.714221238192938 1 0.986948192119598 experiment 0.571557523614124 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415299 chr1:230415293 . . 0 hm6A_associated_SNPs_3852 0 0 1 2 230415289 230415311 mRNA hsa-miR-154 GALNT2 miRanda miRanda
14034 chr1 230415293 230415293 1 + C T rs2273967 230415299 + 230415279 230415319 41 TTTCTTAAACTTTCCGCGAAACTAATATACCTCAGTATTCC TTTCTTAAACTTTCTGCGAAACTAATATACCTCAGTATTCC < 41bp 1 0.714221238192938 1 0.986948192119598 experiment 0.571557523614124 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415299 chr1:230415293 . . 0 hm6A_associated_SNPs_3852 0 0 1 2 230415293 230415312 mRNA hsa-miR-202 GALNT2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829374 230829395 mRNA hsa-miR-30a COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829373 230829395 mRNA hsa-miR-30c COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829374 230829395 mRNA hsa-miR-30d COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829374 230829395 mRNA hsa-miR-30b COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829374 230829395 mRNA hsa-miR-30e COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829368 230829389 mRNA hsa-miR-374a COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829381 230829402 mRNA hsa-miR-375 COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829374 230829399 mRNA hsa-miR-544 COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829366 230829386 mRNA hsa-miR-411 COG2 miRanda miRanda
14034 chr1 230829381 230829381 1 + C T rs372711449 230829376 + 230829356 230829396 41 TAGTTTTTAAGACATTTGAAACTTTCTACTATAGTTTACAG TAGTTTTTAAGACATTTGAAACTTTTTACTATAGTTTACAG < 41bp 1 0.507030919980515 1 0.961498618125916 experiment 0.98593816003897 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 COG2 ENSG00000135775 UTR3 Human protein_coding chr1:230829376 chr1:230829381 . . 0 hm6A_associated_SNPs_3870 0 0 1 10 230829368 230829389 mRNA hsa-miR-374b COG2 miRanda miRanda
14034 chr1 231700674 231700674 1 + A C rs185754637 231700687 + 231700667 231700707 41 AGTTACTAATTCTTTTGAGAACTCCTAAGAGACCAATTTGT AGTTACTCATTCTTTTGAGAACTCCTAAGAGACCAATTTGT < 41bp 1 0.273028007416419 1 0.665834188461304 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 TSNAX-DISC1 ENSG00000116918 UTR3 Human protein_coding chr1:231700687 chr1:231700674 . . 0 hm6A_associated_SNPs_3875 0 0 1 1 231700661 231700682 mRNA hsa-miR-186 TSNAX miRanda miRanda
14034 chr1 231701971 231701971 1 + A G rs147330696 231701978 + 231701958 231701998 41 CCAAAGAAGATGTATTATGAACAATTCAGCAATAAGACAAT CCAAAGAAGATGTGTTATGAACAATTCAGCAATAAGACAAT < 41bp 1 0.427094710220644 1 0.940784931182861 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 TSNAX-DISC1 ENSG00000116918 UTR3 Human protein_coding chr1:231701978 chr1:231701971 . . 0 hm6A_associated_SNPs_3876 0 0 1 2 231701970 231701992 mRNA hsa-miR-137 TSNAX miRanda miRanda
14034 chr1 231701971 231701971 1 + A G rs147330696 231701978 + 231701958 231701998 41 CCAAAGAAGATGTATTATGAACAATTCAGCAATAAGACAAT CCAAAGAAGATGTGTTATGAACAATTCAGCAATAAGACAAT < 41bp 1 0.427094710220644 1 0.940784931182861 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 TSNAX-DISC1 ENSG00000116918 UTR3 Human protein_coding chr1:231701978 chr1:231701971 . . 0 hm6A_associated_SNPs_3876 0 0 1 2 231701969 231701991 mRNA hsa-miR-450a TSNAX miRanda miRanda
14034 chr1 233807174 233807174 1 + G A rs147325030 233807182 + 233807162 233807202 41 GTCCTTCTCCTCGATCACAGACCAGGCAGCTGGCATGAAAG GTCCTTCTCCTCAATCACAGACCAGGCAGCTGGCATGAAAG < 41bp 1 0.756644543917522 1 0.920302867889404 experiment 0.486710912164957 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807182 chr1:233807174 synonymous SNV . 0 hm6A_associated_SNPs_3887 0 0 1 1 233807172 233807193 mRNA hsa-miR-22 KCNK1 miRanda miRanda
14034 chr1 233807453 233807453 1 + G A rs545756872 233807442 + 233807422 233807462 41 AACAAAAAAAGACAAATGGAACAAAGAAGCTGTGACCCCAG AACAAAAAAAGACAAATGGAACAAAGAAGCTATGACCCCAG < 41bp 1 0.581065572614394 1 0.906787395477295 experiment 0.837868854771211 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 32 KCNK1 ENSG00000135750 UTR3 Human protein_coding chr1:233807442 chr1:233807453 . . 0 hm6A_associated_SNPs_3888 0 0 1 1 233807446 233807467 mRNA hsa-miR-370 KCNK1 miRanda miRanda
14034 chr1 235506385 235506385 1 + G A rs186382599 235506398 + 235506378 235506418 41 TTATTCCGTCAATAAAAAAGACTTGCTTCCAGGAATTTTTA TTATTCCATCAATAAAAAAGACTTGCTTCCAGGAATTTTTA < 41bp 1 0.672297949826702 1 0.618678689002991 experiment 0.655404100346597 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 GGPS1 ENSG00000152904 UTR3 Human protein_coding chr1:235506398 chr1:235506385 . . 0 hm6A_associated_SNPs_3893 0 0 1 2 235506369 235506388 mRNA hsa-miR-191 GGPS1 miRanda miRanda
14034 chr1 235506385 235506385 1 + G A rs186382599 235506398 + 235506378 235506418 41 TTATTCCGTCAATAAAAAAGACTTGCTTCCAGGAATTTTTA TTATTCCATCAATAAAAAAGACTTGCTTCCAGGAATTTTTA < 41bp 1 0.672297949826702 1 0.618678689002991 experiment 0.655404100346597 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 GGPS1 ENSG00000152904 UTR3 Human protein_coding chr1:235506398 chr1:235506385 . . 0 hm6A_associated_SNPs_3893 0 0 1 2 235506368 235506389 mRNA hsa-miR-184 GGPS1 miRanda miRanda
14034 chr1 235507346 235507346 1 + C G rs371654078 235507364 + 235507344 235507384 41 AACCAAAGGCTTAATATCAAACACTAATTAGCTTTTTAGTG AAGCAAAGGCTTAATATCAAACACTAATTAGCTTTTTAGTG < 41bp 1 0.149675649575699 1 0.00979062914848328 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 GGPS1 ENSG00000152904 UTR3 Human protein_coding chr1:235507364 chr1:235507346 . . 0 hm6A_associated_SNPs_3894 0 0 1 1 235507330 235507352 mRNA hsa-miR-9 GGPS1 miRanda miRanda
14034 chr1 235599710 235599710 1 + A G rs190849182 235599707 + 235599687 235599727 41 ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTCTGACAC ATTTTGAATTTCAGGTTAGAACAGTTAATCCTCTCTGACAC < 41bp 1 0.451073133149662 1 0.00548473000526428 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 TBCE ENSG00000116957 CDS Human protein_coding chr1:235599707 chr1:235599710 synonymous SNV . 0 hm6A_associated_SNPs_3896 0 0 1 3 235599710 235599731 mRNA hsa-miR-199a-5p TBCE miRanda miRanda
14034 chr1 235599710 235599710 1 + A G rs190849182 235599707 + 235599687 235599727 41 ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTCTGACAC ATTTTGAATTTCAGGTTAGAACAGTTAATCCTCTCTGACAC < 41bp 1 0.451073133149662 1 0.00548473000526428 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 TBCE ENSG00000116957 CDS Human protein_coding chr1:235599707 chr1:235599710 synonymous SNV . 0 hm6A_associated_SNPs_3896 0 0 1 3 235599708 235599731 mRNA hsa-miR-199b-5p TBCE miRanda miRanda
14034 chr1 235599710 235599710 1 + A G rs190849182 235599707 + 235599687 235599727 41 ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTCTGACAC ATTTTGAATTTCAGGTTAGAACAGTTAATCCTCTCTGACAC < 41bp 1 0.451073133149662 1 0.00548473000526428 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 TBCE ENSG00000116957 CDS Human protein_coding chr1:235599707 chr1:235599710 synonymous SNV . 0 hm6A_associated_SNPs_3896 0 0 1 3 235599710 235599732 mRNA hsa-miR-145 TBCE miRanda miRanda
14034 chr1 235612185 235612185 1 + A G rs78867315 235612202 + 235612182 235612222 41 TACAACTTGTCCTAAGTATAACAAGGGATGTATTTTTTGTT TACGACTTGTCCTAAGTATAACAAGGGATGTATTTTTTGTT < 41bp 1 0.504281908405441 1 0.128981232643127 experiment 0.991436183189119 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 4 B3GALNT2;TBCE ENSG00000116957 UTR3 Human protein_coding chr1:235612202 chr1:235612185 . . 0 hm6A_associated_SNPs_3898 1 0 1 1 235612169 235612190 mRNA hsa-miR-382 TBCE miRanda miRanda
14034 chr1 237066928 237066928 1 + C G rs115351376 237066921 + 237066901 237066941 41 TATTCTATGAAATGGAAGAAACAAGAACTAGACAGAGTCAC TATTCTATGAAATGGAAGAAACAAGAAGTAGACAGAGTCAC < 41bp 1 0.276241372039014 1 0.675786137580872 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 MTR ENSG00000116984 UTR3 Human protein_coding chr1:237066921 chr1:237066928 . . 0 hm6A_associated_SNPs_3932 0 0 1 1 237066923 237066944 mRNA hsa-miR-758 MTR miRanda miRanda
14034 chr1 237996734 237996734 1 + C A rs143228973 237996754 + 237996734 237996774 41 CTTTGTATGAAAACAAAAAGACTGCAAAAAATACACTTTCA ATTTGTATGAAAACAAAAAGACTGCAAAAAATACACTTTCA < 41bp 1 0.0386412555759358 1 0.989266514778137 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 RYR2 ENSG00000198626 UTR3 Human protein_coding chr1:237996754 chr1:237996734 . . 0 hm6A_associated_SNPs_3934 2 0 0 2 237996721 237996742 mRNA hsa-miR-381 RYR2 miRanda miRanda
14034 chr1 237996734 237996734 1 + C A rs143228973 237996754 + 237996734 237996774 41 CTTTGTATGAAAACAAAAAGACTGCAAAAAATACACTTTCA ATTTGTATGAAAACAAAAAGACTGCAAAAAATACACTTTCA < 41bp 1 0.0386412555759358 1 0.989266514778137 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 RYR2 ENSG00000198626 UTR3 Human protein_coding chr1:237996754 chr1:237996734 . . 0 hm6A_associated_SNPs_3934 2 0 0 2 237996721 237996742 mRNA hsa-miR-300 RYR2 miRanda miRanda
14034 chr1 241757182 241757182 1 - C T rs12405623 241757181 - 241757161 241757201 41 GACAAAGAGGAGTTTCAGAGACAACTTTGAATCCTTGTCAG GACAAAGAGGAGTTTCAGAAACAACTTTGAATCCTTGTCAG < 41bp 1 0.487018476816637 1 0.961013197898865 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 20 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757181 chr1:241757182 . . 0 hm6A_associated_SNPs_3941 0 0 1 1 241757174 241757195 mRNA hsa-miR-382 OPN3 miRanda miRanda
14034 chr1 241757182 241757182 1 - C T rs12405623 241757200 - 241757180 241757220 41 CGTTTTATATGTGCAGTATGACAAAGAGGAGTTTCAGAGAC CGTTTTATATGTGCAGTATGACAAAGAGGAGTTTCAGAAAC < 41bp 1 0.528739386908355 1 0.86280357837677 experiment 0.94252122618329 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757200 chr1:241757182 . . 0 hm6A_associated_SNPs_3942 0 0 1 1 241757174 241757195 mRNA hsa-miR-382 OPN3 miRanda miRanda
14034 chr1 241757333 241757333 1 - C T rs114951112 241757340 - 241757320 241757360 41 ACATGTGTGAAGTAGCTAGAACATACTGAATTTTTTTTGTA ACATGTGTGAAGTAGCTAGAACATACTAAATTTTTTTTGTA < 41bp 1 0.780215609757963 1 0.563854098320007 experiment 0.439568780484075 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757340 chr1:241757333 . . 0 hm6A_associated_SNPs_3943 0 0 1 2 241757315 241757335 mRNA hsa-miR-101 OPN3 miRanda miRanda
14034 chr1 241757333 241757333 1 - C T rs114951112 241757340 - 241757320 241757360 41 ACATGTGTGAAGTAGCTAGAACATACTGAATTTTTTTTGTA ACATGTGTGAAGTAGCTAGAACATACTAAATTTTTTTTGTA < 41bp 1 0.780215609757963 1 0.563854098320007 experiment 0.439568780484075 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757340 chr1:241757333 . . 0 hm6A_associated_SNPs_3943 0 0 1 2 241757331 241757350 mRNA hsa-miR-144 OPN3 miRanda miRanda
14034 chr1 241757366 241757366 1 - C T rs113897665 241757372 - 241757352 241757392 41 AATACCTTACTGTAAAAATAACTGTCGCGTACACATGTGTG AATACCTTACTGTAAAAATAACTGTCACGTACACATGTGTG < 41bp 1 0.536476008870232 1 0.981668770313263 experiment 0.927047982259535 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 27 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757372 chr1:241757366 . . 0 hm6A_associated_SNPs_3944 0 0 0 1 241757350 241757371 mRNA hsa-miR-377 OPN3 miRanda miRanda
14034 chr1 241757543 241757543 1 - T G rs555076820 241757556 - 241757536 241757576 41 CAGGAAGAGGTTGAACAAAAACAAATTCTTTTAATTCAACG CAGGAAGAGGTTGAACAAAAACAAATTCTTTTACTTCAACG < 41bp 1 0.659742584267506 1 0.985419929027557 experiment 0.680514831464988 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757556 chr1:241757543 . . 0 hm6A_associated_SNPs_3945 0 0 0 3 241757525 241757548 mRNA hsa-miR-30a OPN3 miRanda miRanda
14034 chr1 241757543 241757543 1 - T G rs555076820 241757556 - 241757536 241757576 41 CAGGAAGAGGTTGAACAAAAACAAATTCTTTTAATTCAACG CAGGAAGAGGTTGAACAAAAACAAATTCTTTTACTTCAACG < 41bp 1 0.659742584267506 1 0.985419929027557 experiment 0.680514831464988 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757556 chr1:241757543 . . 0 hm6A_associated_SNPs_3945 0 0 0 3 241757525 241757548 mRNA hsa-miR-30e OPN3 miRanda miRanda
14034 chr1 241757543 241757543 1 - T G rs555076820 241757556 - 241757536 241757576 41 CAGGAAGAGGTTGAACAAAAACAAATTCTTTTAATTCAACG CAGGAAGAGGTTGAACAAAAACAAATTCTTTTACTTCAACG < 41bp 1 0.659742584267506 1 0.985419929027557 experiment 0.680514831464988 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757556 chr1:241757543 . . 0 hm6A_associated_SNPs_3945 0 0 0 3 241757535 241757555 mRNA hsa-miR-653 OPN3 miRanda miRanda
14034 chr1 241757543 241757543 1 - T G rs555076820 241757562 - 241757542 241757582 41 GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTAAT GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTACT < 41bp 1 0.680302017916543 1 0.985869109630585 experiment 0.639395964166915 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757562 chr1:241757543 . . 0 hm6A_associated_SNPs_3946 0 0 0 3 241757525 241757548 mRNA hsa-miR-30a OPN3 miRanda miRanda
14034 chr1 241757543 241757543 1 - T G rs555076820 241757562 - 241757542 241757582 41 GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTAAT GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTACT < 41bp 1 0.680302017916543 1 0.985869109630585 experiment 0.639395964166915 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757562 chr1:241757543 . . 0 hm6A_associated_SNPs_3946 0 0 0 3 241757525 241757548 mRNA hsa-miR-30e OPN3 miRanda miRanda
14034 chr1 241757543 241757543 1 - T G rs555076820 241757562 - 241757542 241757582 41 GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTAAT GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTACT < 41bp 1 0.680302017916543 1 0.985869109630585 experiment 0.639395964166915 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757562 chr1:241757543 . . 0 hm6A_associated_SNPs_3946 0 0 0 3 241757535 241757555 mRNA hsa-miR-653 OPN3 miRanda miRanda
14034 chr1 241757549 241757549 1 - G T rs3765809 241757556 - 241757536 241757576 41 CAGGAAGAGGTTGAACAAAAACAAATTCTTTTAATTCAACG CAGGAAGAGGTTGAACAAAAACAAATTATTTTAATTCAACG < 41bp 1 0.659659814752972 1 0.983791470527649 experiment 0.680680370494056 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757556 chr1:241757549 . . 0 hm6A_associated_SNPs_3947 0 0 0 2 241757545 241757565 mRNA hsa-miR-186 OPN3 miRanda miRanda
14034 chr1 241757549 241757549 1 - G T rs3765809 241757556 - 241757536 241757576 41 CAGGAAGAGGTTGAACAAAAACAAATTCTTTTAATTCAACG CAGGAAGAGGTTGAACAAAAACAAATTATTTTAATTCAACG < 41bp 1 0.659659814752972 1 0.983791470527649 experiment 0.680680370494056 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757556 chr1:241757549 . . 0 hm6A_associated_SNPs_3947 0 0 0 2 241757535 241757555 mRNA hsa-miR-653 OPN3 miRanda miRanda
14034 chr1 241757549 241757549 1 - G T rs3765809 241757562 - 241757542 241757582 41 GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTAAT GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTATTTTAAT < 41bp 1 0.69394375591518 1 0.985862851142883 experiment 0.612112488169639 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757562 chr1:241757549 . . 0 hm6A_associated_SNPs_3948 0 0 0 2 241757545 241757565 mRNA hsa-miR-186 OPN3 miRanda miRanda
14034 chr1 241757549 241757549 1 - G T rs3765809 241757562 - 241757542 241757582 41 GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTCTTTTAAT GGGCCTCAGGAAGAGGTTGAACAAAAACAAATTATTTTAAT < 41bp 1 0.69394375591518 1 0.985862851142883 experiment 0.612112488169639 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 KMO;OPN3 ENSG00000054277;ENSG00000117009 UTR3 Human other chr1:241757562 chr1:241757549 . . 0 hm6A_associated_SNPs_3948 0 0 0 2 241757535 241757555 mRNA hsa-miR-653 OPN3 miRanda miRanda
14034 chr1 244869835 244869835 1 + G C rs574244758 244869855 + 244869835 244869875 41 GATATTCTTGGTAGTAACTGACAAGTATGTTGCACATGTAT CATATTCTTGGTAGTAACTGACAAGTATGTTGCACATGTAT < 41bp 1 0.702908925921014 1 0.0198524594306946 experiment 0.594182148157972 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 DESI2 ENSG00000121644 UTR3 Human protein_coding chr1:244869855 chr1:244869835 . . 0 hm6A_associated_SNPs_3964 0 0 1 1 244869832 244869857 mRNA hsa-miR-223 PPPDE1 miRanda miRanda
14034 chr1 244871049 244871049 1 + G A rs148130997 244871062 + 244871042 244871082 41 CTTCTTAGTGAATATCAGGAACATCCCATCTGTGCTTAACC CTTCTTAATGAATATCAGGAACATCCCATCTGTGCTTAACC < 41bp 1 0.195588142534267 1 0.0540724098682404 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 8 DESI2 ENSG00000121644 UTR3 Human protein_coding chr1:244871062 chr1:244871049 . . 0 hm6A_associated_SNPs_3966 0 0 1 1 244871047 244871068 mRNA hsa-miR-876-5p PPPDE1 miRanda miRanda
14034 chr1 245008168 245008168 1 + T C rs140206023 245008172 + 245008152 245008192 41 AATCAATAATCTGATATTTAACAAAATATGGACAGGCCACT AATCAATAATCTGATACTTAACAAAATATGGACAGGCCACT < 41bp 1 0.166724148231322 1 0.000351935625076294 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 17 COX20 ENSG00000188206 ncRNA_exonic Human other chr1:245008172 chr1:245008168 . . 0 hm6A_associated_SNPs_3968 0 0 1 1 245008147 245008168 mRNA hsa-miR-361-5p FAM36A miRanda miRanda
14034 chr1 245008168 245008168 1 + T C rs140206023 245008183 + 245008163 245008203 41 TGATATTTAACAAAATATGGACAGGCCACTTATGCTCAGTT TGATACTTAACAAAATATGGACAGGCCACTTATGCTCAGTT < 41bp 1 0.270449384765546 1 0.00211739540100098 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 6 COX20 ENSG00000188206 ncRNA_exonic Human other chr1:245008183 chr1:245008168 . . 0 hm6A_associated_SNPs_3969 0 0 1 1 245008147 245008168 mRNA hsa-miR-361-5p FAM36A miRanda miRanda
14034 chr1 246829322 246829322 1 + G A rs148894054 246829316 + 246829296 246829336 41 CCCCCTTCCCTCTGTTAGGAACCAAGGACATCAGAAATAGC CCCCCTTCCCTCTGTTAGGAACCAAGAACATCAGAAATAGC < 41bp 1 0.694372134523731 1 0.0828166306018829 experiment 0.611255730952538 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 CNST ENSG00000162852 UTR3 Human protein_coding chr1:246829316 chr1:246829322 . . 0 hm6A_associated_SNPs_3976 0 0 1 3 246829321 246829343 mRNA hsa-miR-93 CNST miRanda miRanda
14034 chr1 246829322 246829322 1 + G A rs148894054 246829316 + 246829296 246829336 41 CCCCCTTCCCTCTGTTAGGAACCAAGGACATCAGAAATAGC CCCCCTTCCCTCTGTTAGGAACCAAGAACATCAGAAATAGC < 41bp 1 0.694372134523731 1 0.0828166306018829 experiment 0.611255730952538 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 CNST ENSG00000162852 UTR3 Human protein_coding chr1:246829316 chr1:246829322 . . 0 hm6A_associated_SNPs_3976 0 0 1 3 246829314 246829342 mRNA hsa-miR-302a CNST miRanda miRanda
14034 chr1 246829322 246829322 1 + G A rs148894054 246829316 + 246829296 246829336 41 CCCCCTTCCCTCTGTTAGGAACCAAGGACATCAGAAATAGC CCCCCTTCCCTCTGTTAGGAACCAAGAACATCAGAAATAGC < 41bp 1 0.694372134523731 1 0.0828166306018829 experiment 0.611255730952538 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 CNST ENSG00000162852 UTR3 Human protein_coding chr1:246829316 chr1:246829322 . . 0 hm6A_associated_SNPs_3976 0 0 1 3 246829321 246829342 mRNA hsa-miR-520d-3p CNST miRanda miRanda
14034 chr1 246930648 246930648 1 + C G rs77003197 246930644 + 246930624 246930664 41 GTCATAACGTGCGTGAATTAACAGCTTCTCTATTTGATATT GTCATAACGTGCGTGAATTAACAGGTTCTCTATTTGATATT < 41bp 1 0.54623639465564 1 0.0123882591724396 experiment 0.907527210688721 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246930644 chr1:246930648 . . 0 hm6A_associated_SNPs_3979 0 0 1 6 246930631 246930654 mRNA hsa-miR-146a SCCPDH miRanda miRanda
14034 chr1 246930648 246930648 1 + C G rs77003197 246930644 + 246930624 246930664 41 GTCATAACGTGCGTGAATTAACAGCTTCTCTATTTGATATT GTCATAACGTGCGTGAATTAACAGGTTCTCTATTTGATATT < 41bp 1 0.54623639465564 1 0.0123882591724396 experiment 0.907527210688721 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246930644 chr1:246930648 . . 0 hm6A_associated_SNPs_3979 0 0 1 6 246930633 246930652 mRNA hsa-miR-320a SCCPDH miRanda miRanda
14034 chr1 246930648 246930648 1 + C G rs77003197 246930644 + 246930624 246930664 41 GTCATAACGTGCGTGAATTAACAGCTTCTCTATTTGATATT GTCATAACGTGCGTGAATTAACAGGTTCTCTATTTGATATT < 41bp 1 0.54623639465564 1 0.0123882591724396 experiment 0.907527210688721 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246930644 chr1:246930648 . . 0 hm6A_associated_SNPs_3979 0 0 1 6 246930629 246930654 mRNA hsa-miR-146b-5p SCCPDH miRanda miRanda
14034 chr1 246930648 246930648 1 + C G rs77003197 246930644 + 246930624 246930664 41 GTCATAACGTGCGTGAATTAACAGCTTCTCTATTTGATATT GTCATAACGTGCGTGAATTAACAGGTTCTCTATTTGATATT < 41bp 1 0.54623639465564 1 0.0123882591724396 experiment 0.907527210688721 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246930644 chr1:246930648 . . 0 hm6A_associated_SNPs_3979 0 0 1 6 246930633 246930652 mRNA hsa-miR-320b SCCPDH miRanda miRanda
14034 chr1 246930648 246930648 1 + C G rs77003197 246930644 + 246930624 246930664 41 GTCATAACGTGCGTGAATTAACAGCTTCTCTATTTGATATT GTCATAACGTGCGTGAATTAACAGGTTCTCTATTTGATATT < 41bp 1 0.54623639465564 1 0.0123882591724396 experiment 0.907527210688721 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246930644 chr1:246930648 . . 0 hm6A_associated_SNPs_3979 0 0 1 6 246930635 246930652 mRNA hsa-miR-320c SCCPDH miRanda miRanda
14034 chr1 246930648 246930648 1 + C G rs77003197 246930644 + 246930624 246930664 41 GTCATAACGTGCGTGAATTAACAGCTTCTCTATTTGATATT GTCATAACGTGCGTGAATTAACAGGTTCTCTATTTGATATT < 41bp 1 0.54623639465564 1 0.0123882591724396 experiment 0.907527210688721 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246930644 chr1:246930648 . . 0 hm6A_associated_SNPs_3979 0 0 1 6 246930636 246930652 mRNA hsa-miR-320d SCCPDH miRanda miRanda
14034 chr2 277995 277995 1 + A G rs6855 277999 + 277979 278019 41 AATTACATCCAGAAAGAAGGACACTTGTATGCTAGTCTATG AATTACATCCAGAAAGGAGGACACTTGTATGCTAGTCTATG < 41bp 1 0.553735602706156 1 0.277815461158752 experiment 0.892528794587689 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 ACP1 ENSG00000143727 UTR3 Human protein_coding chr2:277999 chr2:277995 . . 0 hm6A_associated_SNPs_3987 0 0 1 4 277987 278009 mRNA hsa-miR-381 ACP1 miRanda miRanda
14034 chr2 277995 277995 1 + A G rs6855 277999 + 277979 278019 41 AATTACATCCAGAAAGAAGGACACTTGTATGCTAGTCTATG AATTACATCCAGAAAGGAGGACACTTGTATGCTAGTCTATG < 41bp 1 0.553735602706156 1 0.277815461158752 experiment 0.892528794587689 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 ACP1 ENSG00000143727 UTR3 Human protein_coding chr2:277999 chr2:277995 . . 0 hm6A_associated_SNPs_3987 0 0 1 4 277982 278005 mRNA hsa-miR-520c-3p ACP1 miRanda miRanda
14034 chr2 277995 277995 1 + A G rs6855 277999 + 277979 278019 41 AATTACATCCAGAAAGAAGGACACTTGTATGCTAGTCTATG AATTACATCCAGAAAGGAGGACACTTGTATGCTAGTCTATG < 41bp 1 0.553735602706156 1 0.277815461158752 experiment 0.892528794587689 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 ACP1 ENSG00000143727 UTR3 Human protein_coding chr2:277999 chr2:277995 . . 0 hm6A_associated_SNPs_3987 0 0 1 4 277981 278005 mRNA hsa-miR-520d-3p ACP1 miRanda miRanda
14034 chr2 277995 277995 1 + A G rs6855 277999 + 277979 278019 41 AATTACATCCAGAAAGAAGGACACTTGTATGCTAGTCTATG AATTACATCCAGAAAGGAGGACACTTGTATGCTAGTCTATG < 41bp 1 0.553735602706156 1 0.277815461158752 experiment 0.892528794587689 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 ACP1 ENSG00000143727 UTR3 Human protein_coding chr2:277999 chr2:277995 . . 0 hm6A_associated_SNPs_3987 0 0 1 4 277987 278009 mRNA hsa-miR-300 ACP1 miRanda miRanda
14034 chr2 3483307 3483307 1 + A G rs138505799 3483325 + 3483305 3483345 41 ACATGGAGGAACTCAATAAAACTCCTGCTTCACTGGTGTCT ACGTGGAGGAACTCAATAAAACTCCTGCTTCACTGGTGTCT < 41bp 1 0.343528958975803 1 0.988672494888306 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 TRAPPC12 ENSG00000171853 UTR3 Human protein_coding chr2:3483325 chr2:3483307 . . 0 hm6A_associated_SNPs_3990 0 0 1 1 3483289 3483313 mRNA hsa-miR-136 TTC15 miRanda miRanda
14034 chr2 10923821 10923821 1 - C T rs6748808 10923805 - 10923785 10923825 41 AACAGAGATTTTACATGGAAACCGGGCTCAGTGAGAACTGA AACAAAGATTTTACATGGAAACCGGGCTCAGTGAGAACTGA < 41bp 1 0.0820001702712665 1 0.936019420623779 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 5 ATP6V1C2;PDIA6 ENSG00000143870;ENSG00000143882 UTR3 Human other chr2:10923805 chr2:10923821 . . 0 hm6A_associated_SNPs_4019 0 0 1 1 10923815 10923836 mRNA hsa-miR-216b PDIA6 miRanda miRanda
14034 chr2 10923991 10923991 1 - T C rs16856645 10923994 - 10923974 10924014 41 TAAAGAATAAAATATTTTGGACAATGCCGATAAATGTATGA TAAAGAATAAAATATTTTGGACAGTGCCGATAAATGTATGA < 41bp 1 0.666300708274229 1 0.978870749473572 experiment 0.667398583451542 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 ATP6V1C2;PDIA6 ENSG00000143870;ENSG00000143882 UTR3 Human other chr2:10923994 chr2:10923991 . . 0 hm6A_associated_SNPs_4020 0 0 1 2 10923986 10924006 mRNA hsa-miR-33a PDIA6 miRanda miRanda
14034 chr2 10923991 10923991 1 - T C rs16856645 10923994 - 10923974 10924014 41 TAAAGAATAAAATATTTTGGACAATGCCGATAAATGTATGA TAAAGAATAAAATATTTTGGACAGTGCCGATAAATGTATGA < 41bp 1 0.666300708274229 1 0.978870749473572 experiment 0.667398583451542 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 ATP6V1C2;PDIA6 ENSG00000143870;ENSG00000143882 UTR3 Human other chr2:10923994 chr2:10923991 . . 0 hm6A_associated_SNPs_4020 0 0 1 2 10923986 10924006 mRNA hsa-miR-33b PDIA6 miRanda miRanda
14034 chr2 10924003 10924003 1 - T C rs190113887 10923994 - 10923974 10924014 41 TAAAGAATAAAATATTTTGGACAATGCCGATAAATGTATGA TAAAGAATAAAGTATTTTGGACAATGCCGATAAATGTATGA < 41bp 1 0.751314758582496 1 0.978558480739594 experiment 0.497370482835009 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 ATP6V1C2;PDIA6 ENSG00000143870;ENSG00000143882 UTR3 Human other chr2:10923994 chr2:10924003 . . 0 hm6A_associated_SNPs_4021 0 0 1 3 10923986 10924006 mRNA hsa-miR-33a PDIA6 miRanda miRanda
14034 chr2 10924003 10924003 1 - T C rs190113887 10923994 - 10923974 10924014 41 TAAAGAATAAAATATTTTGGACAATGCCGATAAATGTATGA TAAAGAATAAAGTATTTTGGACAATGCCGATAAATGTATGA < 41bp 1 0.751314758582496 1 0.978558480739594 experiment 0.497370482835009 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 ATP6V1C2;PDIA6 ENSG00000143870;ENSG00000143882 UTR3 Human other chr2:10923994 chr2:10924003 . . 0 hm6A_associated_SNPs_4021 0 0 1 3 10924000 10924021 mRNA hsa-miR-590-3p PDIA6 miRanda miRanda
14034 chr2 10924003 10924003 1 - T C rs190113887 10923994 - 10923974 10924014 41 TAAAGAATAAAATATTTTGGACAATGCCGATAAATGTATGA TAAAGAATAAAGTATTTTGGACAATGCCGATAAATGTATGA < 41bp 1 0.751314758582496 1 0.978558480739594 experiment 0.497370482835009 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 ATP6V1C2;PDIA6 ENSG00000143870;ENSG00000143882 UTR3 Human other chr2:10923994 chr2:10924003 . . 0 hm6A_associated_SNPs_4021 0 0 1 3 10923986 10924006 mRNA hsa-miR-33b PDIA6 miRanda miRanda
14034 chr2 11318431 11318431 1 + C A rs190512080 11318411 + 11318391 11318431 41 ACTAGGGTTCACTTTCTGGGACTGATGTTTAATTGTAACAC ACTAGGGTTCACTTTCTGGGACTGATGTTTAATTGTAACAA < 41bp 1 0.35713797587002 1 0.965479731559753 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 41 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318411 chr2:11318431 . . 0 hm6A_associated_SNPs_4024 0 0 0 3 11318423 11318446 mRNA hsa-miR-10a PQLC3 miRanda miRanda
14034 chr2 11318431 11318431 1 + C A rs190512080 11318411 + 11318391 11318431 41 ACTAGGGTTCACTTTCTGGGACTGATGTTTAATTGTAACAC ACTAGGGTTCACTTTCTGGGACTGATGTTTAATTGTAACAA < 41bp 1 0.35713797587002 1 0.965479731559753 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 41 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318411 chr2:11318431 . . 0 hm6A_associated_SNPs_4024 0 0 0 3 11318424 11318446 mRNA hsa-miR-10b PQLC3 miRanda miRanda
14034 chr2 11318431 11318431 1 + C A rs190512080 11318411 + 11318391 11318431 41 ACTAGGGTTCACTTTCTGGGACTGATGTTTAATTGTAACAC ACTAGGGTTCACTTTCTGGGACTGATGTTTAATTGTAACAA < 41bp 1 0.35713797587002 1 0.965479731559753 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 41 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318411 chr2:11318431 . . 0 hm6A_associated_SNPs_4024 0 0 0 3 11318431 11318452 mRNA hsa-miR-506 PQLC3 miRanda miRanda
14034 chr2 11318590 11318590 1 + A G rs377190951 11318581 + 11318561 11318601 41 TGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGC TGTGCCTTAAGTAATTACTAACAAAAGGTGCTAGGATTAGC < 41bp 1 0.284607079306297 1 0.376660764217377 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318581 chr2:11318590 . . 0 hm6A_associated_SNPs_4025 0 0 1 3 11318586 11318608 mRNA hsa-miR-25 PQLC3 miRanda miRanda
14034 chr2 11318590 11318590 1 + A G rs377190951 11318581 + 11318561 11318601 41 TGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGC TGTGCCTTAAGTAATTACTAACAAAAGGTGCTAGGATTAGC < 41bp 1 0.284607079306297 1 0.376660764217377 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318581 chr2:11318590 . . 0 hm6A_associated_SNPs_4025 0 0 1 3 11318584 11318608 mRNA hsa-miR-92a PQLC3 miRanda miRanda
14034 chr2 11318590 11318590 1 + A G rs377190951 11318581 + 11318561 11318601 41 TGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGC TGTGCCTTAAGTAATTACTAACAAAAGGTGCTAGGATTAGC < 41bp 1 0.284607079306297 1 0.376660764217377 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318581 chr2:11318590 . . 0 hm6A_associated_SNPs_4025 0 0 1 3 11318584 11318608 mRNA hsa-miR-92b PQLC3 miRanda miRanda
14034 chr2 11318591 11318591 1 + C T rs146895154 11318581 + 11318561 11318601 41 TGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGC TGTGCCTTAAGTAATTACTAACAAAAGGTATTAGGATTAGC < 41bp 1 0.252436130602543 1 0.329832375049591 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318581 chr2:11318591 . . 0 hm6A_associated_SNPs_4026 0 0 1 3 11318586 11318608 mRNA hsa-miR-25 PQLC3 miRanda miRanda
14034 chr2 11318591 11318591 1 + C T rs146895154 11318581 + 11318561 11318601 41 TGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGC TGTGCCTTAAGTAATTACTAACAAAAGGTATTAGGATTAGC < 41bp 1 0.252436130602543 1 0.329832375049591 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318581 chr2:11318591 . . 0 hm6A_associated_SNPs_4026 0 0 1 3 11318584 11318608 mRNA hsa-miR-92a PQLC3 miRanda miRanda
14034 chr2 11318591 11318591 1 + C T rs146895154 11318581 + 11318561 11318601 41 TGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGC TGTGCCTTAAGTAATTACTAACAAAAGGTATTAGGATTAGC < 41bp 1 0.252436130602543 1 0.329832375049591 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318581 chr2:11318591 . . 0 hm6A_associated_SNPs_4026 0 0 1 3 11318584 11318608 mRNA hsa-miR-92b PQLC3 miRanda miRanda
14034 chr2 11965724 11965724 1 + T C rs541171524 11965710 + 11965690 11965730 41 CAACGCCTTAGATTAAAATGACAGTAAATATTACTAAGGCA CAACGCCTTAGATTAAAATGACAGTAAATATTACCAAGGCA < 41bp 1 0.4107848559851 1 0.106195509433746 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 LPIN1 ENSG00000134324 UTR3 Human protein_coding chr2:11965710 chr2:11965724 . . 0 hm6A_associated_SNPs_4032 0 0 1 3 11965714 11965736 mRNA hsa-miR-200b LPIN1 miRanda miRanda
14034 chr2 11965724 11965724 1 + T C rs541171524 11965710 + 11965690 11965730 41 CAACGCCTTAGATTAAAATGACAGTAAATATTACTAAGGCA CAACGCCTTAGATTAAAATGACAGTAAATATTACCAAGGCA < 41bp 1 0.4107848559851 1 0.106195509433746 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 LPIN1 ENSG00000134324 UTR3 Human protein_coding chr2:11965710 chr2:11965724 . . 0 hm6A_associated_SNPs_4032 0 0 1 3 11965713 11965736 mRNA hsa-miR-200c LPIN1 miRanda miRanda
14034 chr2 11965724 11965724 1 + T C rs541171524 11965710 + 11965690 11965730 41 CAACGCCTTAGATTAAAATGACAGTAAATATTACTAAGGCA CAACGCCTTAGATTAAAATGACAGTAAATATTACCAAGGCA < 41bp 1 0.4107848559851 1 0.106195509433746 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 LPIN1 ENSG00000134324 UTR3 Human protein_coding chr2:11965710 chr2:11965724 . . 0 hm6A_associated_SNPs_4032 0 0 1 3 11965714 11965736 mRNA hsa-miR-429 LPIN1 miRanda miRanda
14034 chr2 12881541 12881541 1 + G A rs565581962 12881542 + 12881522 12881562 41 AATATCCTGGTCAGGAAATGACATGTTAATGCTTTGCTCCC AATATCCTGGTCAGGAAATAACATGTTAATGCTTTGCTCCC < 41bp 1 0.751579770745758 1 0.0332402884960175 experiment 0.496840458508483 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 20 TRIB2 ENSG00000071575 UTR3 Human protein_coding chr2:12881542 chr2:12881541 . . 0 hm6A_associated_SNPs_4039 0 0 1 1 12881524 12881548 mRNA hsa-miR-181b TRIB2 miRanda miRanda
14034 chr2 12882431 12882431 1 + T C rs531296710 12882433 + 12882413 12882453 41 GTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTA GTCCTGTTTTTGGGTAGGCGACACGTGGACTCTAGTATGTA Direct Loss 1 0.484463468100906 1 0.712101399898529 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 19 TRIB2 ENSG00000071575 UTR3 Human protein_coding chr2:12882433 chr2:12882431 . . 0 hm6A_associated_SNPs_4041 0 0 1 1 12882420 12882441 mRNA hsa-miR-199a-5p TRIB2 miRanda miRanda
14034 chr2 17836883 17836883 1 + A C rs546427955 17836871 + 17836851 17836891 41 ATTTTAAAAGCATATATAAAACAAAACAAACAACCTGCCAC ATTTTAAAAGCATATATAAAACAAAACAAACACCCTGCCAC < 41bp 1 0.328940089983062 1 0.0558823645114899 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 33 VSNL1 ENSG00000163032 UTR3 Human protein_coding chr2:17836871 chr2:17836883 . . 0 hm6A_associated_SNPs_4044 0 0 1 4 17836877 17836899 mRNA hsa-miR-23a VSNL1 miRanda miRanda
14034 chr2 17836883 17836883 1 + A C rs546427955 17836871 + 17836851 17836891 41 ATTTTAAAAGCATATATAAAACAAAACAAACAACCTGCCAC ATTTTAAAAGCATATATAAAACAAAACAAACACCCTGCCAC < 41bp 1 0.328940089983062 1 0.0558823645114899 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 33 VSNL1 ENSG00000163032 UTR3 Human protein_coding chr2:17836871 chr2:17836883 . . 0 hm6A_associated_SNPs_4044 0 0 1 4 17836879 17836904 mRNA hsa-miR-181b VSNL1 miRanda miRanda
14034 chr2 17836883 17836883 1 + A C rs546427955 17836871 + 17836851 17836891 41 ATTTTAAAAGCATATATAAAACAAAACAAACAACCTGCCAC ATTTTAAAAGCATATATAAAACAAAACAAACACCCTGCCAC < 41bp 1 0.328940089983062 1 0.0558823645114899 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 33 VSNL1 ENSG00000163032 UTR3 Human protein_coding chr2:17836871 chr2:17836883 . . 0 hm6A_associated_SNPs_4044 0 0 1 4 17836877 17836899 mRNA hsa-miR-23b VSNL1 miRanda miRanda
14034 chr2 17836883 17836883 1 + A C rs546427955 17836871 + 17836851 17836891 41 ATTTTAAAAGCATATATAAAACAAAACAAACAACCTGCCAC ATTTTAAAAGCATATATAAAACAAAACAAACACCCTGCCAC < 41bp 1 0.328940089983062 1 0.0558823645114899 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 33 VSNL1 ENSG00000163032 UTR3 Human protein_coding chr2:17836871 chr2:17836883 . . 0 hm6A_associated_SNPs_4044 0 0 1 4 17836879 17836904 mRNA hsa-miR-181d VSNL1 miRanda miRanda
14034 chr2 17964997 17964997 1 + A G rs55775535 17964999 + 17964979 17965019 41 TTTTAAACCAGAGTGCCAAGACAATTCAATGGGAAAAGGAA TTTTAAACCAGAGTGCCAGGACAATTCAATGGGAAAAGGAA < 41bp 1 0.674962123065671 1 0.353967279195786 experiment 0.650075753868657 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 19 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17964999 chr2:17964997 . . 0 hm6A_associated_SNPs_4047 0 0 1 2 17964976 17964998 mRNA hsa-miR-96 GEN1 miRanda miRanda
14034 chr2 17964997 17964997 1 + A G rs55775535 17964999 + 17964979 17965019 41 TTTTAAACCAGAGTGCCAAGACAATTCAATGGGAAAAGGAA TTTTAAACCAGAGTGCCAGGACAATTCAATGGGAAAAGGAA < 41bp 1 0.674962123065671 1 0.353967279195786 experiment 0.650075753868657 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 19 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17964999 chr2:17964997 . . 0 hm6A_associated_SNPs_4047 0 0 1 2 17964976 17964998 mRNA hsa-miR-1271 GEN1 miRanda miRanda
14034 chr2 17965413 17965413 1 + A T rs149968443 17965396 + 17965376 17965416 41 ATCTTGGTGGTATATAAAGAACTCGTAACTCAATTATAAAA ATCTTGGTGGTATATAAAGAACTCGTAACTCAATTATTAAA < 41bp 1 0.48306801388197 1 0.800715565681458 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965396 chr2:17965413 . . 0 hm6A_associated_SNPs_4049 0 0 1 1 17965405 17965426 mRNA hsa-miR-382 GEN1 miRanda miRanda
14034 chr2 17965413 17965413 1 + A T rs149968443 17965419 + 17965399 17965439 41 CGTAACTCAATTATAAAAAGACAACTTTGAAATGGGCAAAA CGTAACTCAATTATTAAAAGACAACTTTGAAATGGGCAAAA < 41bp 1 0.650999758075105 1 0.489227414131165 experiment 0.69800048384979 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965419 chr2:17965413 . . 0 hm6A_associated_SNPs_4050 0 0 1 1 17965405 17965426 mRNA hsa-miR-382 GEN1 miRanda miRanda
14034 chr2 17965931 17965931 1 + G A rs300170 17965933 + 17965913 17965953 41 ATCATCTCAACTCTTTAAGGACTGTATTGCAATGTTTTGAA ATCATCTCAACTCTTTAAAGACTGTATTGCAATGTTTTGAA < 41bp 1 0.109059812162225 1 0.236721336841583 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965933 chr2:17965931 . . 0 hm6A_associated_SNPs_4052 0 0 1 3 17965925 17965948 mRNA hsa-miR-181a GEN1 miRanda miRanda
14034 chr2 17965931 17965931 1 + G A rs300170 17965933 + 17965913 17965953 41 ATCATCTCAACTCTTTAAGGACTGTATTGCAATGTTTTGAA ATCATCTCAACTCTTTAAAGACTGTATTGCAATGTTTTGAA < 41bp 1 0.109059812162225 1 0.236721336841583 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965933 chr2:17965931 . . 0 hm6A_associated_SNPs_4052 0 0 1 3 17965925 17965948 mRNA hsa-miR-181b GEN1 miRanda miRanda
14034 chr2 17965931 17965931 1 + G A rs300170 17965933 + 17965913 17965953 41 ATCATCTCAACTCTTTAAGGACTGTATTGCAATGTTTTGAA ATCATCTCAACTCTTTAAAGACTGTATTGCAATGTTTTGAA < 41bp 1 0.109059812162225 1 0.236721336841583 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965933 chr2:17965931 . . 0 hm6A_associated_SNPs_4052 0 0 1 3 17965925 17965948 mRNA hsa-miR-181d GEN1 miRanda miRanda
14034 chr2 17965944 17965944 1 + A C rs73218901 17965933 + 17965913 17965953 41 ATCATCTCAACTCTTTAAGGACTGTATTGCAATGTTTTGAA ATCATCTCAACTCTTTAAGGACTGTATTGCACTGTTTTGAA < 41bp 1 0.17143677915182 1 0.701689124107361 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965933 chr2:17965944 . . 0 hm6A_associated_SNPs_4053 0 0 1 3 17965925 17965948 mRNA hsa-miR-181a GEN1 miRanda miRanda
14034 chr2 17965944 17965944 1 + A C rs73218901 17965933 + 17965913 17965953 41 ATCATCTCAACTCTTTAAGGACTGTATTGCAATGTTTTGAA ATCATCTCAACTCTTTAAGGACTGTATTGCACTGTTTTGAA < 41bp 1 0.17143677915182 1 0.701689124107361 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965933 chr2:17965944 . . 0 hm6A_associated_SNPs_4053 0 0 1 3 17965925 17965948 mRNA hsa-miR-181b GEN1 miRanda miRanda
14034 chr2 17965944 17965944 1 + A C rs73218901 17965933 + 17965913 17965953 41 ATCATCTCAACTCTTTAAGGACTGTATTGCAATGTTTTGAA ATCATCTCAACTCTTTAAGGACTGTATTGCACTGTTTTGAA < 41bp 1 0.17143677915182 1 0.701689124107361 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 GEN1 ENSG00000178295 UTR3 Human protein_coding chr2:17965933 chr2:17965944 . . 0 hm6A_associated_SNPs_4053 0 0 1 3 17965925 17965948 mRNA hsa-miR-181d GEN1 miRanda miRanda
14034 chr2 18113868 18113868 1 + T C rs74861505 18113875 + 18113855 18113895 41 TACCTTTCAGCCATAGTTGGACATTCATTGCTGAATTCTGA TACCTTTCAGCCACAGTTGGACATTCATTGCTGAATTCTGA < 41bp 1 0.736050558247864 1 0.941875457763672 experiment 0.527898883504271 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 KCNS3 ENSG00000170745 UTR3 Human protein_coding chr2:18113875 chr2:18113868 . . 0 hm6A_associated_SNPs_4054 0 0 0 2 18113847 18113869 mRNA hsa-miR-135a KCNS3 miRanda miRanda
14034 chr2 18113868 18113868 1 + T C rs74861505 18113875 + 18113855 18113895 41 TACCTTTCAGCCATAGTTGGACATTCATTGCTGAATTCTGA TACCTTTCAGCCACAGTTGGACATTCATTGCTGAATTCTGA < 41bp 1 0.736050558247864 1 0.941875457763672 experiment 0.527898883504271 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 KCNS3 ENSG00000170745 UTR3 Human protein_coding chr2:18113875 chr2:18113868 . . 0 hm6A_associated_SNPs_4054 0 0 0 2 18113847 18113869 mRNA hsa-miR-135b KCNS3 miRanda miRanda
14034 chr2 23919740 23919740 1 + T C rs72796130 23919757 + 23919737 23919777 41 CCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAA CCACGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAA < 41bp 1 0.202167702411032 1 0.972553133964539 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23919757 chr2:23919740 . . 0 hm6A_associated_SNPs_4071 0 0 0 2 23919737 23919757 mRNA hsa-miR-330-5p KLHL29 miRanda miRanda
14034 chr2 23919740 23919740 1 + T C rs72796130 23919757 + 23919737 23919777 41 CCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAA CCACGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAA < 41bp 1 0.202167702411032 1 0.972553133964539 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23919757 chr2:23919740 . . 0 hm6A_associated_SNPs_4071 0 0 0 2 23919738 23919757 mRNA hsa-miR-326 KLHL29 miRanda miRanda
14034 chr2 23930990 23930990 1 + C T rs575921321 23930982 + 23930962 23931002 41 ACCATTTATAAGAGAAAAAGACAGGACACGCTTTCCATCGT ACCATTTATAAGAGAAAAAGACAGGACATGCTTTCCATCGT < 41bp 1 0.510676539231377 1 0.822712659835815 experiment 0.978646921537245 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23930982 chr2:23930990 . . 0 hm6A_associated_SNPs_4073 0 0 0 3 23930990 23931011 mRNA hsa-miR-200b KLHL29 miRanda miRanda
14034 chr2 23930990 23930990 1 + C T rs575921321 23930982 + 23930962 23931002 41 ACCATTTATAAGAGAAAAAGACAGGACACGCTTTCCATCGT ACCATTTATAAGAGAAAAAGACAGGACATGCTTTCCATCGT < 41bp 1 0.510676539231377 1 0.822712659835815 experiment 0.978646921537245 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23930982 chr2:23930990 . . 0 hm6A_associated_SNPs_4073 0 0 0 3 23930987 23931011 mRNA hsa-miR-200c KLHL29 miRanda miRanda
14034 chr2 23930990 23930990 1 + C T rs575921321 23930982 + 23930962 23931002 41 ACCATTTATAAGAGAAAAAGACAGGACACGCTTTCCATCGT ACCATTTATAAGAGAAAAAGACAGGACATGCTTTCCATCGT < 41bp 1 0.510676539231377 1 0.822712659835815 experiment 0.978646921537245 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23930982 chr2:23930990 . . 0 hm6A_associated_SNPs_4073 0 0 0 3 23930989 23931011 mRNA hsa-miR-429 KLHL29 miRanda miRanda
14034 chr2 23930991 23930991 1 + G A rs114116956 23930982 + 23930962 23931002 41 ACCATTTATAAGAGAAAAAGACAGGACACGCTTTCCATCGT ACCATTTATAAGAGAAAAAGACAGGACACACTTTCCATCGT < 41bp 1 0.55630764326378 1 0.823739469051361 experiment 0.887384713472439 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23930982 chr2:23930991 . . 0 hm6A_associated_SNPs_4074 0 0 0 3 23930990 23931011 mRNA hsa-miR-200b KLHL29 miRanda miRanda
14034 chr2 23930991 23930991 1 + G A rs114116956 23930982 + 23930962 23931002 41 ACCATTTATAAGAGAAAAAGACAGGACACGCTTTCCATCGT ACCATTTATAAGAGAAAAAGACAGGACACACTTTCCATCGT < 41bp 1 0.55630764326378 1 0.823739469051361 experiment 0.887384713472439 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23930982 chr2:23930991 . . 0 hm6A_associated_SNPs_4074 0 0 0 3 23930987 23931011 mRNA hsa-miR-200c KLHL29 miRanda miRanda
14034 chr2 23930991 23930991 1 + G A rs114116956 23930982 + 23930962 23931002 41 ACCATTTATAAGAGAAAAAGACAGGACACGCTTTCCATCGT ACCATTTATAAGAGAAAAAGACAGGACACACTTTCCATCGT < 41bp 1 0.55630764326378 1 0.823739469051361 experiment 0.887384713472439 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 KLHL29 ENSG00000119771 UTR3 Human protein_coding chr2:23930982 chr2:23930991 . . 0 hm6A_associated_SNPs_4074 0 0 0 3 23930989 23931011 mRNA hsa-miR-429 KLHL29 miRanda miRanda
14034 chr2 24286079 24286079 1 + A C rs77743612 24286075 + 24286055 24286095 41 TAGAGTGAAGGCAGGAAGGAACTCAAGGTGGCTGGAGATGG TAGAGTGAAGGCAGGAAGGAACTCCAGGTGGCTGGAGATGG < 41bp 1 0.568538325471313 1 0.369460940361023 experiment 0.862923349057374 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 FKBP1B ENSG00000119782;ENSG00000205639 UTR3 Human other chr2:24286075 chr2:24286079 . . 0 hm6A_associated_SNPs_4077 0 0 1 2 24286079 24286101 mRNA hsa-miR-29a FKBP1B miRanda miRanda
14034 chr2 24286079 24286079 1 + A C rs77743612 24286075 + 24286055 24286095 41 TAGAGTGAAGGCAGGAAGGAACTCAAGGTGGCTGGAGATGG TAGAGTGAAGGCAGGAAGGAACTCCAGGTGGCTGGAGATGG < 41bp 1 0.568538325471313 1 0.369460940361023 experiment 0.862923349057374 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 FKBP1B ENSG00000119782;ENSG00000205639 UTR3 Human other chr2:24286075 chr2:24286079 . . 0 hm6A_associated_SNPs_4077 0 0 1 2 24286078 24286101 mRNA hsa-miR-29b FKBP1B miRanda miRanda
14034 chr2 24991495 24991495 1 + G T rs182366285 24991497 + 24991477 24991517 41 TGAAAAAATACCAAGGCAGAACAGTTGGACAATCTATTTCT TGAAAAAATACCAAGGCATAACAGTTGGACAATCTATTTCT < 41bp 1 0.707986223551972 1 0.940454721450806 experiment 0.584027552896055 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 NCOA1 ENSG00000084676 UTR3 Human protein_coding chr2:24991497 chr2:24991495 . . 0 hm6A_associated_SNPs_4080 0 0 1 1 24991491 24991511 mRNA hsa-miR-219-5p NCOA1 miRanda miRanda
14034 chr2 24991498 24991498 1 + C T rs142380693 24991497 + 24991477 24991517 41 TGAAAAAATACCAAGGCAGAACAGTTGGACAATCTATTTCT TGAAAAAATACCAAGGCAGAATAGTTGGACAATCTATTTCT Direct Loss 1 0.794575832770553 1 0.927737355232239 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 NCOA1 ENSG00000084676 UTR3 Human protein_coding chr2:24991497 chr2:24991498 . . 0 hm6A_associated_SNPs_4081 0 0 1 1 24991491 24991511 mRNA hsa-miR-219-5p NCOA1 miRanda miRanda
14034 chr2 25042625 25042625 1 + C G rs1044040 25042609 + 25042589 25042629 41 CTAAGACCCCTATGCTGGGGACACTACAGGCACACACAGGA CTAAGACCCCTATGCTGGGGACACTACAGGCACACAGAGGA < 41bp 1 0.795065785480385 1 0.990378379821777 experiment 0.40986842903923 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 ADCY3;CENPO ENSG00000138031;ENSG00000138092 UTR3 Human other chr2:25042609 chr2:25042625 . . 0 hm6A_associated_SNPs_4087 0 0 0 1 25042620 25042642 mRNA hsa-miR-328 CENPO miRanda miRanda
14034 chr2 26359972 26359972 1 + G C rs563727242 26359969 + 26359949 26359989 41 AACACTGGGATTTTTGGATAACAGACTGACAGTTTTGCATA AACACTGGGATTTTTGGATAACACACTGACAGTTTTGCATA < 41bp 1 0.510813769520037 1 0.195919990539551 experiment 0.978372460959926 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 RAB10 ENSG00000084733 UTR3 Human protein_coding chr2:26359969 chr2:26359972 . . 0 hm6A_associated_SNPs_4098 0 0 1 3 26359968 26359989 mRNA hsa-miR-19a RAB10 miRanda miRanda
14034 chr2 26359972 26359972 1 + G C rs563727242 26359969 + 26359949 26359989 41 AACACTGGGATTTTTGGATAACAGACTGACAGTTTTGCATA AACACTGGGATTTTTGGATAACACACTGACAGTTTTGCATA < 41bp 1 0.510813769520037 1 0.195919990539551 experiment 0.978372460959926 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 RAB10 ENSG00000084733 UTR3 Human protein_coding chr2:26359969 chr2:26359972 . . 0 hm6A_associated_SNPs_4098 0 0 1 3 26359967 26359989 mRNA hsa-miR-19b RAB10 miRanda miRanda
14034 chr2 26359972 26359972 1 + G C rs563727242 26359969 + 26359949 26359989 41 AACACTGGGATTTTTGGATAACAGACTGACAGTTTTGCATA AACACTGGGATTTTTGGATAACACACTGACAGTTTTGCATA < 41bp 1 0.510813769520037 1 0.195919990539551 experiment 0.978372460959926 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 RAB10 ENSG00000084733 UTR3 Human protein_coding chr2:26359969 chr2:26359972 . . 0 hm6A_associated_SNPs_4098 0 0 1 3 26359954 26359979 mRNA hsa-miR-223 RAB10 miRanda miRanda
14034 chr2 26359972 26359972 1 + G C rs563727242 26359977 + 26359957 26359997 41 GATTTTTGGATAACAGACTGACAGTTTTGCATAATTATAAT GATTTTTGGATAACACACTGACAGTTTTGCATAATTATAAT < 41bp 1 0.657889729691727 1 0.222852438688278 experiment 0.684220540616546 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 RAB10 ENSG00000084733 UTR3 Human protein_coding chr2:26359977 chr2:26359972 . . 0 hm6A_associated_SNPs_4099 0 0 1 3 26359968 26359989 mRNA hsa-miR-19a RAB10 miRanda miRanda
14034 chr2 26359972 26359972 1 + G C rs563727242 26359977 + 26359957 26359997 41 GATTTTTGGATAACAGACTGACAGTTTTGCATAATTATAAT GATTTTTGGATAACACACTGACAGTTTTGCATAATTATAAT < 41bp 1 0.657889729691727 1 0.222852438688278 experiment 0.684220540616546 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 RAB10 ENSG00000084733 UTR3 Human protein_coding chr2:26359977 chr2:26359972 . . 0 hm6A_associated_SNPs_4099 0 0 1 3 26359967 26359989 mRNA hsa-miR-19b RAB10 miRanda miRanda
14034 chr2 26359972 26359972 1 + G C rs563727242 26359977 + 26359957 26359997 41 GATTTTTGGATAACAGACTGACAGTTTTGCATAATTATAAT GATTTTTGGATAACACACTGACAGTTTTGCATAATTATAAT < 41bp 1 0.657889729691727 1 0.222852438688278 experiment 0.684220540616546 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 RAB10 ENSG00000084733 UTR3 Human protein_coding chr2:26359977 chr2:26359972 . . 0 hm6A_associated_SNPs_4099 0 0 1 3 26359954 26359979 mRNA hsa-miR-223 RAB10 miRanda miRanda
14034 chr2 27264203 27264203 1 + A C rs529905061 27264205 + 27264185 27264225 41 ATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCACCT ATATAGCACCGCATTGGGCAACAGCAGCCTCACCTCCACCT Direct Loss 1 0.588031195050546 1 0.0508216917514801 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 19 TMEM214 ENSG00000119777 UTR3 Human protein_coding chr2:27264205 chr2:27264203 . . 0 hm6A_associated_SNPs_4122 0 0 1 2 27264199 27264221 mRNA hsa-let-7e TMEM214 miRanda miRanda
14034 chr2 27264203 27264203 1 + A C rs529905061 27264205 + 27264185 27264225 41 ATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCACCT ATATAGCACCGCATTGGGCAACAGCAGCCTCACCTCCACCT Direct Loss 1 0.588031195050546 1 0.0508216917514801 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 19 TMEM214 ENSG00000119777 UTR3 Human protein_coding chr2:27264205 chr2:27264203 . . 0 hm6A_associated_SNPs_4122 0 0 1 2 27264196 27264216 mRNA hsa-miR-485-5p TMEM214 miRanda miRanda
14034 chr2 27282361 27282361 1 + C T rs187145501 27282366 + 27282346 27282386 41 AGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAA AGATATACTGTTGGCTCAGGACCAAGGGGTGAATCAATAAA < 41bp 1 0.181210284626062 1 0.831453561782837 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 AGBL5 ENSG00000084693 UTR3 Human protein_coding chr2:27282366 chr2:27282361 . . 0 hm6A_associated_SNPs_4124 0 0 1 2 27282350 27282371 mRNA hsa-miR-133a AGBL5 miRanda miRanda
14034 chr2 27282361 27282361 1 + C T rs187145501 27282366 + 27282346 27282386 41 AGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAA AGATATACTGTTGGCTCAGGACCAAGGGGTGAATCAATAAA < 41bp 1 0.181210284626062 1 0.831453561782837 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 AGBL5 ENSG00000084693 UTR3 Human protein_coding chr2:27282366 chr2:27282361 . . 0 hm6A_associated_SNPs_4124 0 0 1 2 27282350 27282371 mRNA hsa-miR-133b AGBL5 miRanda miRanda
14034 chr2 27844601 27844601 1 + T A rs1881396 27844617 + 27844597 27844637 41 CTCCTCTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTG CTCCACTTGCCCTGTACAAAACTAAGAAACCTCTTTGGTTG < 41bp 1 0.466928495382822 1 0.0365800559520721 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 ZNF512 ENSG00000259080 ncRNA_intronic Human processed_transcript chr2:27844617 chr2:27844601 . . 0 hm6A_associated_SNPs_4141 0 1 1 1 27844588 27844608 mRNA hsa-miR-31 ZNF512 miRanda miRanda
14034 chr2 27873631 27873631 1 + T G rs144134591 27873651 + 27873631 27873671 41 TGTTGAAAAAAGTGGGCAAGACATGATTAATGAATCAGAAT GGTTGAAAAAAGTGGGCAAGACATGATTAATGAATCAGAAT < 41bp 1 0.57355748989338 1 0.0530866086483002 experiment 0.85288502021324 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 1 GPN1 ENSG00000198522 UTR3 Human protein_coding chr2:27873651 chr2:27873631 . . 0 hm6A_associated_SNPs_4142 0 0 1 1 27873614 27873635 mRNA hsa-miR-495 GPN1 miRanda miRanda
14034 chr2 29022849 29022849 1 + T A rs79934788 29022869 + 29022849 29022889 41 TTTGCTTTATACAGGAATTGACACTGATTTGGATTTGTGCA ATTGCTTTATACAGGAATTGACACTGATTTGGATTTGTGCA < 41bp 1 0.577183995274101 1 0.558646202087402 experiment 0.845632009451798 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 1 PPP1CB ENSG00000213639 UTR3 Human protein_coding chr2:29022869 chr2:29022849 . . 0 hm6A_associated_SNPs_4150 0 0 1 1 29022840 29022860 mRNA hsa-miR-340 PPP1CB miRanda miRanda
14034 chr2 29025568 29025568 1 + A G rs576329788 29025584 + 29025564 29025604 41 ACTAAGTGAAACTTAGTGTAACAATTTTGATCTGTTAAATT ACTAGGTGAAACTTAGTGTAACAATTTTGATCTGTTAAATT < 41bp 1 0.312972159734947 1 0.00256034731864929 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 PPP1CB ENSG00000213639 UTR3 Human protein_coding chr2:29025584 chr2:29025568 . . 0 hm6A_associated_SNPs_4153 0 0 1 1 29025550 29025573 mRNA hsa-miR-27a PPP1CB miRanda miRanda
14034 chr2 29170124 29170124 1 + G A rs538253184 29170137 + 29170117 29170157 41 ATATGAAGGGATAACTACAAACTGGAGTAAAAATGATGGTA ATATGAAAGGATAACTACAAACTGGAGTAAAAATGATGGTA < 41bp 1 0.725190818394234 1 0.965896606445312 experiment 0.549618363211531 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170137 chr2:29170124 . . 0 hm6A_associated_SNPs_4155 0 0 1 3 29170105 29170126 mRNA hsa-miR-205 WDR43 miRanda miRanda
14034 chr2 29170124 29170124 1 + G A rs538253184 29170137 + 29170117 29170157 41 ATATGAAGGGATAACTACAAACTGGAGTAAAAATGATGGTA ATATGAAAGGATAACTACAAACTGGAGTAAAAATGATGGTA < 41bp 1 0.725190818394234 1 0.965896606445312 experiment 0.549618363211531 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170137 chr2:29170124 . . 0 hm6A_associated_SNPs_4155 0 0 1 3 29170123 29170143 mRNA hsa-miR-145 WDR43 miRanda miRanda
14034 chr2 29170124 29170124 1 + G A rs538253184 29170137 + 29170117 29170157 41 ATATGAAGGGATAACTACAAACTGGAGTAAAAATGATGGTA ATATGAAAGGATAACTACAAACTGGAGTAAAAATGATGGTA < 41bp 1 0.725190818394234 1 0.965896606445312 experiment 0.549618363211531 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170137 chr2:29170124 . . 0 hm6A_associated_SNPs_4155 0 0 1 3 29170121 29170144 mRNA hsa-miR-136 WDR43 miRanda miRanda
14034 chr2 29170125 29170125 1 + G A rs188446761 29170137 + 29170117 29170157 41 ATATGAAGGGATAACTACAAACTGGAGTAAAAATGATGGTA ATATGAAGAGATAACTACAAACTGGAGTAAAAATGATGGTA < 41bp 1 0.699203892327007 1 0.964415788650513 experiment 0.601592215345986 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170137 chr2:29170125 . . 0 hm6A_associated_SNPs_4156 0 0 1 3 29170105 29170126 mRNA hsa-miR-205 WDR43 miRanda miRanda
14034 chr2 29170125 29170125 1 + G A rs188446761 29170137 + 29170117 29170157 41 ATATGAAGGGATAACTACAAACTGGAGTAAAAATGATGGTA ATATGAAGAGATAACTACAAACTGGAGTAAAAATGATGGTA < 41bp 1 0.699203892327007 1 0.964415788650513 experiment 0.601592215345986 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170137 chr2:29170125 . . 0 hm6A_associated_SNPs_4156 0 0 1 3 29170123 29170143 mRNA hsa-miR-145 WDR43 miRanda miRanda
14034 chr2 29170125 29170125 1 + G A rs188446761 29170137 + 29170117 29170157 41 ATATGAAGGGATAACTACAAACTGGAGTAAAAATGATGGTA ATATGAAGAGATAACTACAAACTGGAGTAAAAATGATGGTA < 41bp 1 0.699203892327007 1 0.964415788650513 experiment 0.601592215345986 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170137 chr2:29170125 . . 0 hm6A_associated_SNPs_4156 0 0 1 3 29170121 29170144 mRNA hsa-miR-136 WDR43 miRanda miRanda
14034 chr2 31489768 31489768 1 + C T rs150263934 31489781 + 31489761 31489801 41 AAGTTCTCGGGATTAGAAGGACAAGAGCACTCCCAGGCCCC AAGTTCTTGGGATTAGAAGGACAAGAGCACTCCCAGGCCCC < 41bp 1 0.553264411141056 1 0.704893946647644 experiment 0.893471177717887 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 8 EHD3 ENSG00000013016 UTR3 Human protein_coding chr2:31489781 chr2:31489768 . . 0 hm6A_associated_SNPs_4174 0 0 1 2 31489748 31489769 mRNA hsa-miR-146a EHD3 miRanda miRanda
14034 chr2 31489768 31489768 1 + C T rs150263934 31489781 + 31489761 31489801 41 AAGTTCTCGGGATTAGAAGGACAAGAGCACTCCCAGGCCCC AAGTTCTTGGGATTAGAAGGACAAGAGCACTCCCAGGCCCC < 41bp 1 0.553264411141056 1 0.704893946647644 experiment 0.893471177717887 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 8 EHD3 ENSG00000013016 UTR3 Human protein_coding chr2:31489781 chr2:31489768 . . 0 hm6A_associated_SNPs_4174 0 0 1 2 31489748 31489769 mRNA hsa-miR-146b-5p EHD3 miRanda miRanda
14034 chr2 32379663 32379663 1 + A G rs56272862 32379648 + 32379628 32379668 41 GAACGTCATCGGCTACAGAAACAGCCTAAGTTTACAGGACT GAACGTCATCGGCTACAGAAACAGCCTAAGTTTACGGGACT < 41bp 1 0.700391020634278 1 0.995630502700806 experiment 0.599217958731443 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 36 SPAST ENSG00000021574 UTR3 Human protein_coding chr2:32379648 chr2:32379663 . . 0 hm6A_associated_SNPs_4180 1 1 1 1 32379659 32379682 mRNA hsa-miR-499-5p SPAST miRanda miRanda
14034 chr2 32843085 32843085 1 + T C rs185482851 32843072 + 32843052 32843092 41 ATTATGTAATAGGTAATGAAACTGAAACTATACTATGCCCT ATTATGTAATAGGTAATGAAACTGAAACTATACCATGCCCT < 41bp 1 0.634169698056613 1 0.945154905319214 experiment 0.731660603886774 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 BIRC6 ENSG00000115760 UTR3 Human protein_coding chr2:32843072 chr2:32843085 . . 0 hm6A_associated_SNPs_4192 0 0 1 1 32843070 32843091 mRNA hsa-miR-153 BIRC6 miRanda miRanda
14034 chr2 33623743 33623743 1 + C T rs573637625 33623752 + 33623732 33623772 41 GAATTGCAAGTCCTCTGAAGACAATGAGAGGATTTAGGATG GAATTGCAAGTTCTCTGAAGACAATGAGAGGATTTAGGATG < 41bp 1 0.789063400471053 1 0.962960302829742 experiment 0.421873199057895 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 LTBP1 ENSG00000049323 UTR3 Human protein_coding chr2:33623752 chr2:33623743 . . 0 hm6A_associated_SNPs_4197 0 0 0 1 33623738 33623762 mRNA hsa-miR-136 LTBP1 miRanda miRanda
14034 chr2 36777891 36777891 1 + G A rs115601730 36777885 + 36777865 36777905 41 TACATTACAAAAATAGATTGACATCAGCCTGATTAGTATAA TACATTACAAAAATAGATTGACATCAACCTGATTAGTATAA < 41bp 1 0.181797357191981 1 0.517222285270691 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 CRIM1 ENSG00000150938 UTR3 Human protein_coding chr2:36777885 chr2:36777891 . . 0 hm6A_associated_SNPs_4200 0 0 1 1 36777875 36777896 mRNA hsa-miR-485-5p CRIM1 miRanda miRanda
14034 chr2 37323689 37323689 1 + C T rs141870518 37323677 + 37323657 37323697 41 TTTAAGGACACCAACAGGTAACTTCTTATTCCCCTCTTCAC TTTAAGGACACCAACAGGTAACTTCTTATTCCTCTCTTCAC < 41bp 1 0.0357145486453372 1 0.0588991343975067 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 GPATCH11 ENSG00000152133 UTR3 Human protein_coding chr2:37323677 chr2:37323689 . . 0 hm6A_associated_SNPs_4203 0 0 0 1 37323687 37323708 mRNA hsa-miR-375 CCDC75 miRanda miRanda
14034 chr2 38960996 38960996 1 + T C rs187174408 38960981 + 38960961 38961001 41 AGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCT AGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGCTGGCT < 41bp 1 0.767694754016086 1 0.497164696455002 experiment 0.464610491967828 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 GALM ENSG00000143891 UTR3 Human protein_coding chr2:38960981 chr2:38960996 . . 0 hm6A_associated_SNPs_4213 0 0 1 1 38960989 38961012 mRNA hsa-miR-185 GALM miRanda miRanda
14034 chr2 39944443 39944443 1 + G A rs201625949 39944438 + 39944418 39944458 41 GCGAGCGACTCCTGAGGGGAACAGCGCGGAGTTCAGGAGTC GCGAGCGACTCCTGAGGGGAACAGCACGGAGTTCAGGAGTC < 41bp 1 0.432607986058637 1 0.951055765151978 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 TMEM178A ENSG00000152154 UTR3 Human protein_coding chr2:39944438 chr2:39944443 . . 0 hm6A_associated_SNPs_4219 0 0 0 1 39944437 39944459 mRNA hsa-miR-504 TMEM178 miRanda miRanda
14034 chr2 39944451 39944451 1 + C G rs182711713 39944438 + 39944418 39944458 41 GCGAGCGACTCCTGAGGGGAACAGCGCGGAGTTCAGGAGTC GCGAGCGACTCCTGAGGGGAACAGCGCGGAGTTGAGGAGTC < 41bp 1 0.475645473792669 1 0.964900195598602 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 TMEM178A ENSG00000152154 UTR3 Human protein_coding chr2:39944438 chr2:39944451 . . 0 hm6A_associated_SNPs_4220 0 0 0 2 39944447 39944467 mRNA hsa-miR-218 TMEM178 miRanda miRanda
14034 chr2 39944451 39944451 1 + C G rs182711713 39944438 + 39944418 39944458 41 GCGAGCGACTCCTGAGGGGAACAGCGCGGAGTTCAGGAGTC GCGAGCGACTCCTGAGGGGAACAGCGCGGAGTTGAGGAGTC < 41bp 1 0.475645473792669 1 0.964900195598602 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 TMEM178A ENSG00000152154 UTR3 Human protein_coding chr2:39944438 chr2:39944451 . . 0 hm6A_associated_SNPs_4220 0 0 0 2 39944437 39944459 mRNA hsa-miR-504 TMEM178 miRanda miRanda
14034 chr2 42557775 42557775 1 + T C rs559604425 42557788 + 42557768 42557808 41 TTTTTTTTCCTGAAAAAGAAACCAGAAAAAAATGTACTCTT TTTTTTTCCCTGAAAAAGAAACCAGAAAAAAATGTACTCTT < 41bp 1 0.32210559212017 1 0.957933366298676 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 8 EML4 ENSG00000143924 UTR3 Human protein_coding chr2:42557788 chr2:42557775 . . 0 hm6A_associated_SNPs_4222 0 0 1 1 42557760 42557780 mRNA hsa-miR-873 EML4 miRanda miRanda
14034 chr2 46611910 46611910 1 + A G rs62137032 46611914 + 46611894 46611934 41 GCACACTATTTACAAGATGGACTTACCTGGCAGACTTGCCC GCACACTATTTACAAGGTGGACTTACCTGGCAGACTTGCCC < 41bp 1 0.680865297801118 1 0.983217239379883 experiment 0.638269404397764 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 17 EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46611914 chr2:46611910 . . 0 hm6A_associated_SNPs_4235 1 0 1 1 46611906 46611929 mRNA hsa-miR-346 EPAS1 miRanda miRanda
14034 chr2 46611910 46611910 1 + A G rs62137032 46611927 + 46611907 46611947 41 AAGATGGACTTACCTGGCAGACTTGCCCAGGTCACCAAGCA AAGGTGGACTTACCTGGCAGACTTGCCCAGGTCACCAAGCA < 41bp 1 0.568650569279217 1 0.917029082775116 experiment 0.862698861441566 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46611927 chr2:46611910 . . 0 hm6A_associated_SNPs_4236 1 0 1 1 46611906 46611929 mRNA hsa-miR-346 EPAS1 miRanda miRanda
14034 chr2 46612707 46612707 1 + G A rs546157125 46612700 + 46612680 46612720 41 TGCTCCCACGGCCTGTACGGACACTGTGGAAGGCCTCCCTC TGCTCCCACGGCCTGTACGGACACTGTAGAAGGCCTCCCTC < 41bp 1 0.379285671405743 1 0.940416514873505 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612700 chr2:46612707 . . 0 hm6A_associated_SNPs_4239 0 0 1 1 46612689 46612708 mRNA hsa-miR-128 EPAS1 miRanda miRanda
14034 chr2 47301417 47301417 1 + T C rs576245940 47301431 + 47301411 47301451 41 CCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGT CCACTCCCAGCACAGTACAGACTTCTGGATCTCTCTCAGGT < 41bp 1 0.37473040093537 1 0.739684879779816 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 TTC7A ENSG00000068724 UTR3 Human protein_coding chr2:47301431 chr2:47301417 . . 0 hm6A_associated_SNPs_4250 0 0 0 1 47301411 47301435 mRNA hsa-miR-382 TTC7A miRanda miRanda
14034 chr2 47613788 47613788 1 + G A rs77204711 47613796 + 47613776 47613816 41 AGAAGGGAAATAGCAAATGGACACAAATTACAAATGTGTGT AGAAGGGAAATAACAAATGGACACAAATTACAAATGTGTGT < 41bp 1 0.762485705073791 1 0.566363751888275 experiment 0.475028589852418 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47613796 chr2:47613788 . . 0 hm6A_associated_SNPs_4251 1 0 1 1 47613783 47613802 mRNA hsa-miR-599 EPCAM miRanda miRanda
14034 chr2 47614013 47614013 1 + G C rs189199539 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATCTGTAACATTCAAATGTGTGCATTAA < 41bp 1 0.450322945914396 1 0.0334360003471375 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614013 . . 0 hm6A_associated_SNPs_4252 1 0 1 4 47614001 47614025 mRNA hsa-miR-1 EPCAM miRanda miRanda
14034 chr2 47614013 47614013 1 + G C rs189199539 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATCTGTAACATTCAAATGTGTGCATTAA < 41bp 1 0.450322945914396 1 0.0334360003471375 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614013 . . 0 hm6A_associated_SNPs_4252 1 0 1 4 47614004 47614025 mRNA hsa-miR-206 EPCAM miRanda miRanda
14034 chr2 47614013 47614013 1 + G C rs189199539 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATCTGTAACATTCAAATGTGTGCATTAA < 41bp 1 0.450322945914396 1 0.0334360003471375 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614013 . . 0 hm6A_associated_SNPs_4252 1 0 1 4 47614013 47614034 mRNA hsa-miR-377 EPCAM miRanda miRanda
14034 chr2 47614013 47614013 1 + G C rs189199539 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATCTGTAACATTCAAATGTGTGCATTAA < 41bp 1 0.450322945914396 1 0.0334360003471375 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614013 . . 0 hm6A_associated_SNPs_4252 1 0 1 4 47614006 47614025 mRNA hsa-miR-613 EPCAM miRanda miRanda
14034 chr2 47614017 47614017 1 + A T rs11554292 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATGTGTTACATTCAAATGTGTGCATTAA Direct Loss 1 0.475754894760911 1 0.0410451591014862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614017 . . 0 hm6A_associated_SNPs_4253 1 0 1 5 47614001 47614025 mRNA hsa-miR-1 EPCAM miRanda miRanda
14034 chr2 47614017 47614017 1 + A T rs11554292 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATGTGTTACATTCAAATGTGTGCATTAA Direct Loss 1 0.475754894760911 1 0.0410451591014862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614017 . . 0 hm6A_associated_SNPs_4253 1 0 1 5 47614004 47614025 mRNA hsa-miR-206 EPCAM miRanda miRanda
14034 chr2 47614017 47614017 1 + A T rs11554292 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATGTGTTACATTCAAATGTGTGCATTAA Direct Loss 1 0.475754894760911 1 0.0410451591014862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614017 . . 0 hm6A_associated_SNPs_4253 1 0 1 5 47614016 47614038 mRNA hsa-miR-155 EPCAM miRanda miRanda
14034 chr2 47614017 47614017 1 + A T rs11554292 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATGTGTTACATTCAAATGTGTGCATTAA Direct Loss 1 0.475754894760911 1 0.0410451591014862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614017 . . 0 hm6A_associated_SNPs_4253 1 0 1 5 47614013 47614034 mRNA hsa-miR-377 EPCAM miRanda miRanda
14034 chr2 47614017 47614017 1 + A T rs11554292 47614018 + 47613998 47614038 41 GTTAAAATTATTTATGTGTAACATTCAAATGTGTGCATTAA GTTAAAATTATTTATGTGTTACATTCAAATGTGTGCATTAA Direct Loss 1 0.475754894760911 1 0.0410451591014862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47614018 chr2:47614017 . . 0 hm6A_associated_SNPs_4253 1 0 1 5 47614006 47614025 mRNA hsa-miR-613 EPCAM miRanda miRanda
14034 chr2 47710229 47710229 1 + T G rs17225053 47710242 + 47710222 47710262 41 AGTAATATTTTACTTTGAGGACATTTTCAAAGATTTTTATT AGTAATAGTTTACTTTGAGGACATTTTCAAAGATTTTTATT < 41bp 1 0.204847385075008 1 0.449997544288635 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 MSH2 ENSG00000095002 UTR3 Human protein_coding chr2:47710242 chr2:47710229 . . 0 hm6A_associated_SNPs_4257 1 0 1 1 47710222 47710241 mRNA hsa-miR-371-5p MSH2 miRanda miRanda
14034 chr2 47710239 47710239 1 + A T rs145007871 47710242 + 47710222 47710262 41 AGTAATATTTTACTTTGAGGACATTTTCAAAGATTTTTATT AGTAATATTTTACTTTGTGGACATTTTCAAAGATTTTTATT < 41bp 1 0.205809512634363 1 0.693116366863251 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 MSH2 ENSG00000095002 UTR3 Human protein_coding chr2:47710242 chr2:47710239 . . 0 hm6A_associated_SNPs_4258 0 0 1 1 47710222 47710241 mRNA hsa-miR-371-5p MSH2 miRanda miRanda
14034 chr2 54045839 54045839 1 + C A rs114372333 54045822 + 54045802 54045842 41 ACTCAGAATGGTTTACTCTAACAAAACACTGTGCTGTCTAT ACTCAGAATGGTTTACTCTAACAAAACACTGTGCTGTATAT < 41bp 1 0.44999175690209 1 0.000896960496902466 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 38 ERLEC1 ENSG00000068912 UTR3 Human protein_coding chr2:54045822 chr2:54045839 . . 0 hm6A_associated_SNPs_4268 0 0 1 1 54045819 54045845 mRNA hsa-miR-7 ERLEC1 miRanda miRanda
14034 chr2 54045839 54045839 1 + C A rs114372333 54045827 + 54045807 54045847 41 GAATGGTTTACTCTAACAAAACACTGTGCTGTCTATCCCTT GAATGGTTTACTCTAACAAAACACTGTGCTGTATATCCCTT < 41bp 1 0.343071594663102 1 0.00131890177726746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 ERLEC1 ENSG00000068912 UTR3 Human protein_coding chr2:54045827 chr2:54045839 . . 0 hm6A_associated_SNPs_4269 0 0 1 1 54045819 54045845 mRNA hsa-miR-7 ERLEC1 miRanda miRanda
14034 chr2 54532075 54532075 1 + A T rs184679426 54532086 + 54532066 54532106 41 CGTGCTACTAAAAATGTCTGACACTGAAATAATTTTACTCA CGTGCTACTTAAAATGTCTGACACTGAAATAATTTTACTCA < 41bp 1 0.347853245884625 1 0.0255583524703979 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 10 ACYP2 ENSG00000170634 UTR3 Human protein_coding chr2:54532086 chr2:54532075 . . 0 hm6A_associated_SNPs_4270 0 0 1 3 54532072 54532093 mRNA hsa-miR-199a-5p ACYP2 miRanda miRanda
14034 chr2 54532075 54532075 1 + A T rs184679426 54532086 + 54532066 54532106 41 CGTGCTACTAAAAATGTCTGACACTGAAATAATTTTACTCA CGTGCTACTTAAAATGTCTGACACTGAAATAATTTTACTCA < 41bp 1 0.347853245884625 1 0.0255583524703979 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 10 ACYP2 ENSG00000170634 UTR3 Human protein_coding chr2:54532086 chr2:54532075 . . 0 hm6A_associated_SNPs_4270 0 0 1 3 54532073 54532093 mRNA hsa-miR-199b-5p ACYP2 miRanda miRanda
14034 chr2 54532075 54532075 1 + A T rs184679426 54532086 + 54532066 54532106 41 CGTGCTACTAAAAATGTCTGACACTGAAATAATTTTACTCA CGTGCTACTTAAAATGTCTGACACTGAAATAATTTTACTCA < 41bp 1 0.347853245884625 1 0.0255583524703979 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 10 ACYP2 ENSG00000170634 UTR3 Human protein_coding chr2:54532086 chr2:54532075 . . 0 hm6A_associated_SNPs_4270 0 0 1 3 54532054 54532075 mRNA hsa-miR-411 ACYP2 miRanda miRanda
14034 chr2 54895890 54895890 1 + A G rs530604344 54895876 + 54895856 54895896 41 GGTGGGGGAAACACACCTAAACACTTTATCTCCAAGTTACA GGTGGGGGAAACACACCTAAACACTTTATCTCCAGGTTACA < 41bp 1 0.609018673069624 1 0.10335436463356 experiment 0.781962653860751 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 SPTBN1 ENSG00000115306 UTR3 Human protein_coding chr2:54895876 chr2:54895890 . . 0 hm6A_associated_SNPs_4295 0 0 1 1 54895888 54895907 mRNA hsa-miR-371-5p SPTBN1 miRanda miRanda
14034 chr2 55462714 55462714 1 + C A rs148807785 55462698 + 55462678 55462718 41 CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAAATGTA < 41bp 1 0.720763780003404 1 0.240257859230042 experiment 0.558472439993192 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 RPS27A ENSG00000143947 UTR3 Human protein_coding chr2:55462698 chr2:55462714 . . 0 hm6A_associated_SNPs_4298 0 0 1 2 55462700 55462720 mRNA hsa-miR-139-5p RPS27A miRanda miRanda
14034 chr2 55462714 55462714 1 + C A rs148807785 55462698 + 55462678 55462718 41 CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAAATGTA < 41bp 1 0.720763780003404 1 0.240257859230042 experiment 0.558472439993192 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 RPS27A ENSG00000143947 UTR3 Human protein_coding chr2:55462698 chr2:55462714 . . 0 hm6A_associated_SNPs_4298 0 0 1 2 55462712 55462737 mRNA hsa-miR-135a RPS27A miRanda miRanda
14034 chr2 55511532 55511532 1 + G A rs138047936 55511529 + 55511509 55511549 41 TTCTCACATTTGTGAAGATGACAGGACATGATCCCATAATA TTCTCACATTTGTGAAGATGACAAGACATGATCCCATAATA < 41bp 1 0.254155583528785 1 0.771826207637787 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRORSD1P ENSG00000162997 ncRNA_exonic Human transcribed_unitary_pseudogene chr2:55511529 chr2:55511532 . . 0 hm6A_associated_SNPs_4300 0 0 0 2 55511519 55511542 mRNA hsa-miR-190 PRDXDD1P miRanda miRanda
14034 chr2 55511532 55511532 1 + G A rs138047936 55511529 + 55511509 55511549 41 TTCTCACATTTGTGAAGATGACAGGACATGATCCCATAATA TTCTCACATTTGTGAAGATGACAAGACATGATCCCATAATA < 41bp 1 0.254155583528785 1 0.771826207637787 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRORSD1P ENSG00000162997 ncRNA_exonic Human transcribed_unitary_pseudogene chr2:55511529 chr2:55511532 . . 0 hm6A_associated_SNPs_4300 0 0 0 2 55511532 55511553 mRNA hsa-miR-496 PRDXDD1P miRanda miRanda
14034 chr2 61024423 61024423 1 + C T rs532190788 61024404 + 61024384 61024424 41 CGTGAAATAAGGTGAAAGTGACAGCCTTCAGTCTAATAACC CGTGAAATAAGGTGAAAGTGACAGCCTTCAGTCTAATAATC < 41bp 1 0.532587635224004 1 0.938982367515564 experiment 0.934824729551992 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 40 PAPOLG ENSG00000115421 UTR3 Human protein_coding chr2:61024404 chr2:61024423 . . 0 hm6A_associated_SNPs_4306 0 0 1 1 61024403 61024426 mRNA hsa-miR-154 PAPOLG miRanda miRanda
14034 chr2 61024423 61024423 1 + C T rs532190788 61024441 + 61024421 61024461 41 AACCTTGAAGTGGTTTTTGAACTGTCAAACTTTGACCTGTA AATCTTGAAGTGGTTTTTGAACTGTCAAACTTTGACCTGTA < 41bp 1 0.607480652239514 1 0.977195560932159 experiment 0.785038695520971 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 PAPOLG ENSG00000115421 UTR3 Human protein_coding chr2:61024441 chr2:61024423 . . 0 hm6A_associated_SNPs_4307 0 0 1 1 61024403 61024426 mRNA hsa-miR-154 PAPOLG miRanda miRanda
14034 chr2 61413594 61413594 1 + A T rs182249606 61413584 + 61413564 61413604 41 TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATG TTCCCCTCTCTTTTCAGTTAACAAATAAGATGATCATCATG < 41bp 1 0.414432583355688 1 0.811931490898132 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413584 chr2:61413594 nonsynonymous SNV 0.925 3 hm6A_associated_SNPs_4316 0 0 1 2 61413593 61413613 mRNA hsa-miR-136 AHSA2 miRanda miRanda
14034 chr2 61413594 61413594 1 + A T rs182249606 61413584 + 61413564 61413604 41 TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATG TTCCCCTCTCTTTTCAGTTAACAAATAAGATGATCATCATG < 41bp 1 0.414432583355688 1 0.811931490898132 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413584 chr2:61413594 nonsynonymous SNV 0.925 3 hm6A_associated_SNPs_4316 0 0 1 2 61413585 61413606 mRNA hsa-miR-433 AHSA2 miRanda miRanda
14034 chr2 63834283 63834283 1 + T C rs185518449 63834275 + 63834255 63834295 41 TTGGTACAGGTTTGTGAATGACAGTTTATCGTCATGCTGTT TTGGTACAGGTTTGTGAATGACAGTTTACCGTCATGCTGTT < 41bp 1 0.486652884216426 1 0.151098221540451 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 MDH1 ENSG00000014641 UTR3 Human protein_coding chr2:63834275 chr2:63834283 . . 0 hm6A_associated_SNPs_4328 0 0 1 1 63834283 63834306 mRNA hsa-miR-367 MDH1 miRanda miRanda
14034 chr2 65313795 65313795 1 + C T rs61758847 65313799 + 65313779 65313819 41 CATGGCATCACAGTATCTTGACATTTGTTTTGTGTCATTTA CATGGCATCACAGTATTTTGACATTTGTTTTGTGTCATTTA < 41bp 1 0.181800361582577 1 0.711863875389099 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 17 CEP68 ENSG00000011523 UTR3 Human protein_coding chr2:65313799 chr2:65313795 . . 0 hm6A_associated_SNPs_4343 0 0 1 1 65313795 65313817 mRNA hsa-miR-425 CEP68 miRanda miRanda
14034 chr2 65497826 65497826 1 + A G rs115509130 65497809 + 65497789 65497829 41 GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTATCG GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTGTCG < 41bp 1 0.377614378757441 1 0.752137184143066 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACTR2 ENSG00000138071 UTR3 Human protein_coding chr2:65497809 chr2:65497826 . . 0 hm6A_associated_SNPs_4354 0 0 1 4 65497822 65497846 mRNA hsa-miR-181a ACTR2 miRanda miRanda
14034 chr2 65497826 65497826 1 + A G rs115509130 65497809 + 65497789 65497829 41 GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTATCG GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTGTCG < 41bp 1 0.377614378757441 1 0.752137184143066 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACTR2 ENSG00000138071 UTR3 Human protein_coding chr2:65497809 chr2:65497826 . . 0 hm6A_associated_SNPs_4354 0 0 1 4 65497822 65497846 mRNA hsa-miR-181b ACTR2 miRanda miRanda
14034 chr2 65497826 65497826 1 + A G rs115509130 65497809 + 65497789 65497829 41 GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTATCG GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTGTCG < 41bp 1 0.377614378757441 1 0.752137184143066 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACTR2 ENSG00000138071 UTR3 Human protein_coding chr2:65497809 chr2:65497826 . . 0 hm6A_associated_SNPs_4354 0 0 1 4 65497825 65497846 mRNA hsa-miR-181c ACTR2 miRanda miRanda
14034 chr2 65497826 65497826 1 + A G rs115509130 65497809 + 65497789 65497829 41 GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTATCG GAATGGAATGGACTCTTAAAACAATGAAAGAGCATTTGTCG < 41bp 1 0.377614378757441 1 0.752137184143066 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACTR2 ENSG00000138071 UTR3 Human protein_coding chr2:65497809 chr2:65497826 . . 0 hm6A_associated_SNPs_4354 0 0 1 4 65497824 65497846 mRNA hsa-miR-181d ACTR2 miRanda miRanda
14034 chr2 66798878 66798878 1 + T C rs540456266 66798863 + 66798843 66798883 41 CTATATAAGACATTAAGAGAACAAAGAGTGAAATATTGTAA CTATATAAGACATTAAGAGAACAAAGAGTGAAATACTGTAA < 41bp 1 0.484222816991568 1 0.174978971481323 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 MEIS1 ENSG00000143995 UTR3 Human protein_coding chr2:66798863 chr2:66798878 . . 0 hm6A_associated_SNPs_4356 0 0 1 4 66798863 66798882 mRNA hsa-miR-144 MEIS1 miRanda miRanda
14034 chr2 66798878 66798878 1 + T C rs540456266 66798863 + 66798843 66798883 41 CTATATAAGACATTAAGAGAACAAAGAGTGAAATATTGTAA CTATATAAGACATTAAGAGAACAAAGAGTGAAATACTGTAA < 41bp 1 0.484222816991568 1 0.174978971481323 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 MEIS1 ENSG00000143995 UTR3 Human protein_coding chr2:66798863 chr2:66798878 . . 0 hm6A_associated_SNPs_4356 0 0 1 4 66798875 66798895 mRNA hsa-miR-374a MEIS1 miRanda miRanda
14034 chr2 66798878 66798878 1 + T C rs540456266 66798863 + 66798843 66798883 41 CTATATAAGACATTAAGAGAACAAAGAGTGAAATATTGTAA CTATATAAGACATTAAGAGAACAAAGAGTGAAATACTGTAA < 41bp 1 0.484222816991568 1 0.174978971481323 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 MEIS1 ENSG00000143995 UTR3 Human protein_coding chr2:66798863 chr2:66798878 . . 0 hm6A_associated_SNPs_4356 0 0 1 4 66798873 66798895 mRNA hsa-miR-340 MEIS1 miRanda miRanda
14034 chr2 66798878 66798878 1 + T C rs540456266 66798863 + 66798843 66798883 41 CTATATAAGACATTAAGAGAACAAAGAGTGAAATATTGTAA CTATATAAGACATTAAGAGAACAAAGAGTGAAATACTGTAA < 41bp 1 0.484222816991568 1 0.174978971481323 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 MEIS1 ENSG00000143995 UTR3 Human protein_coding chr2:66798863 chr2:66798878 . . 0 hm6A_associated_SNPs_4356 0 0 1 4 66798874 66798895 mRNA hsa-miR-374b MEIS1 miRanda miRanda
14034 chr2 67637196 67637196 1 + G A rs1569 67637200 + 67637180 67637220 41 AGTTGGAAGACTTCACGAAGACTGCTGATAACTATCTGTGA AGTTGGAAGACTTCACAAAGACTGCTGATAACTATCTGTGA < 41bp 1 0.697181348155973 1 0.97398841381073 experiment 0.605637303688053 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 17 ETAA1 ENSG00000143971 UTR3 Human protein_coding chr2:67637200 chr2:67637196 . . 0 hm6A_associated_SNPs_4369 0 0 0 2 67637186 67637207 mRNA hsa-miR-214 ETAA1 miRanda miRanda
14034 chr2 67637196 67637196 1 + G A rs1569 67637200 + 67637180 67637220 41 AGTTGGAAGACTTCACGAAGACTGCTGATAACTATCTGTGA AGTTGGAAGACTTCACAAAGACTGCTGATAACTATCTGTGA < 41bp 1 0.697181348155973 1 0.97398841381073 experiment 0.605637303688053 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 17 ETAA1 ENSG00000143971 UTR3 Human protein_coding chr2:67637200 chr2:67637196 . . 0 hm6A_associated_SNPs_4369 0 0 0 2 67637187 67637210 mRNA hsa-miR-361-5p ETAA1 miRanda miRanda
14034 chr2 68402351 68402351 1 + C A rs147836514 68402366 + 68402346 68402386 41 AAAAACCTCTCTGAATGATGACCCTTCCTTAATACTGGGTG AAAAAACTCTCTGAATGATGACCCTTCCTTAATACTGGGTG < 41bp 1 0.0526994802679862 1 0.0104953348636627 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 PNO1 ENSG00000115946 UTR3 Human protein_coding chr2:68402366 chr2:68402351 . . 0 hm6A_associated_SNPs_4370 0 0 1 1 68402346 68402367 mRNA hsa-miR-23a PNO1 miRanda miRanda
14034 chr2 68402360 68402360 1 + A G rs13003580 68402366 + 68402346 68402386 41 AAAAACCTCTCTGAATGATGACCCTTCCTTAATACTGGGTG AAAAACCTCTCTGAGTGATGACCCTTCCTTAATACTGGGTG < 41bp 1 0.0564117405808848 1 0.00182220339775085 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 PNO1 ENSG00000115946 UTR3 Human protein_coding chr2:68402366 chr2:68402360 . . 0 hm6A_associated_SNPs_4371 0 0 1 1 68402346 68402367 mRNA hsa-miR-23a PNO1 miRanda miRanda
14034 chr2 69053452 69053452 1 + A G rs548099210 69053434 + 69053414 69053454 41 TATTCTCTGAGAGGGAAAGGACATTTGAGGGAAACATCAAA TATTCTCTGAGAGGGAAAGGACATTTGAGGGAAACATCGAA < 41bp 1 0.5489255982815 1 0.960914731025696 experiment 0.902148803437001 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ARHGAP25 ENSG00000163219 UTR3 Human protein_coding chr2:69053434 chr2:69053452 . . 0 hm6A_associated_SNPs_4375 0 0 0 1 69053445 69053464 mRNA hsa-miR-491-5p ARHGAP25 miRanda miRanda
14034 chr2 69475954 69475954 1 + C G rs72903180 69475964 + 69475944 69475984 41 AGTTTGCAAACTATATAAAGACATATGCAGTAAAAAGTCTG AGTTTGCAAAGTATATAAAGACATATGCAGTAAAAAGTCTG < 41bp 1 0.147580173410576 1 0.17713275551796 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 ANTXR1 ENSG00000169604 UTR3 Human protein_coding chr2:69475964 chr2:69475954 . . 0 hm6A_associated_SNPs_4385 0 0 0 3 69475952 69475973 mRNA hsa-miR-33a ANTXR1 miRanda miRanda
14034 chr2 69475954 69475954 1 + C G rs72903180 69475964 + 69475944 69475984 41 AGTTTGCAAACTATATAAAGACATATGCAGTAAAAAGTCTG AGTTTGCAAAGTATATAAAGACATATGCAGTAAAAAGTCTG < 41bp 1 0.147580173410576 1 0.17713275551796 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 ANTXR1 ENSG00000169604 UTR3 Human protein_coding chr2:69475964 chr2:69475954 . . 0 hm6A_associated_SNPs_4385 0 0 0 3 69475954 69475975 mRNA hsa-miR-217 ANTXR1 miRanda miRanda
14034 chr2 69475954 69475954 1 + C G rs72903180 69475964 + 69475944 69475984 41 AGTTTGCAAACTATATAAAGACATATGCAGTAAAAAGTCTG AGTTTGCAAAGTATATAAAGACATATGCAGTAAAAAGTCTG < 41bp 1 0.147580173410576 1 0.17713275551796 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 ANTXR1 ENSG00000169604 UTR3 Human protein_coding chr2:69475964 chr2:69475954 . . 0 hm6A_associated_SNPs_4385 0 0 0 3 69475952 69475973 mRNA hsa-miR-448 ANTXR1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106202 mRNA hsa-miR-17 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106202 mRNA hsa-miR-20a GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106180 70106202 mRNA hsa-miR-93 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106202 mRNA hsa-miR-106a GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106183 70106202 mRNA hsa-miR-106b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106201 mRNA hsa-miR-302a GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106201 mRNA hsa-miR-302b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106201 mRNA hsa-miR-302c GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106201 mRNA hsa-miR-302d GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106179 70106201 mRNA hsa-miR-372 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106179 70106201 mRNA hsa-miR-373 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106202 mRNA hsa-miR-20b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106201 mRNA hsa-miR-520e GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106179 70106201 mRNA hsa-miR-520a-3p GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106201 mRNA hsa-miR-520b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106180 70106201 mRNA hsa-miR-520c-3p GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106181 70106202 mRNA hsa-miR-519d GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106180 70106201 mRNA hsa-miR-520d-3p GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106189 + 70106169 70106209 41 GAAGATTTCATCAGTTGGAAACAGTAGCACTTTGAAAACTT GAAGATTTCATCAGTTGGAAACAGTAACACTTTGAAAACTT < 41bp 1 0.783117631224179 1 0.887836456298828 experiment 0.433764737551642 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106189 chr2:70106195 . . 0 hm6A_associated_SNPs_4388 0 0 1 19 70106185 70106201 mRNA hsa-miR-302e GMCL1 miRanda miRanda
14034 chr2 71623282 71623282 1 + C A rs142316365 71623276 + 71623256 71623296 41 TTCTTGTTGTTTTAGCCAAAACTGGACAAGCCAAGGCATCT TTCTTGTTGTTTTAGCCAAAACTGGAAAAGCCAAGGCATCT < 41bp 1 0.0968388127735205 1 0.00784203410148621 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71623276 chr2:71623282 nonsynonymous SNV 0.972 0 hm6A_associated_SNPs_4401 0 0 1 2 71623280 71623301 mRNA hsa-miR-139-5p ZNF638 miRanda miRanda
14034 chr2 71623282 71623282 1 + C A rs142316365 71623276 + 71623256 71623296 41 TTCTTGTTGTTTTAGCCAAAACTGGACAAGCCAAGGCATCT TTCTTGTTGTTTTAGCCAAAACTGGAAAAGCCAAGGCATCT < 41bp 1 0.0968388127735205 1 0.00784203410148621 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71623276 chr2:71623282 nonsynonymous SNV 0.972 0 hm6A_associated_SNPs_4401 0 0 1 2 71623271 71623282 mRNA hsa-miR-145 ZNF638 miRanda miRanda
14034 chr2 71653685 71653685 1 + G A rs76058335 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAAGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC < 41bp 1 0.730720582551119 1 0.995957612991333 experiment 0.538558834897762 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 5 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653685 synonymous SNV . 0 hm6A_associated_SNPs_4403 0 0 1 2 71653666 71653689 mRNA hsa-miR-204 ZNF638 miRanda miRanda
14034 chr2 71653685 71653685 1 + G A rs76058335 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAAGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC < 41bp 1 0.730720582551119 1 0.995957612991333 experiment 0.538558834897762 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 5 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653685 synonymous SNV . 0 hm6A_associated_SNPs_4403 0 0 1 2 71653666 71653689 mRNA hsa-miR-211 ZNF638 miRanda miRanda
14034 chr2 71654450 71654450 1 + A G rs60163900 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAGAAGACAAAACTTGAATCCTTGTCCCAAGT < 41bp 1 0.712434916506069 1 0.993229627609253 experiment 0.575130166987863 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654450 synonymous SNV . 0 hm6A_associated_SNPs_4405 0 0 1 3 71654444 71654465 mRNA hsa-miR-26a ZNF638 miRanda miRanda
14034 chr2 71654450 71654450 1 + A G rs60163900 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAGAAGACAAAACTTGAATCCTTGTCCCAAGT < 41bp 1 0.712434916506069 1 0.993229627609253 experiment 0.575130166987863 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654450 synonymous SNV . 0 hm6A_associated_SNPs_4405 0 0 1 3 71654445 71654465 mRNA hsa-miR-26b ZNF638 miRanda miRanda
14034 chr2 71654450 71654450 1 + A G rs60163900 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAGAAGACAAAACTTGAATCCTTGTCCCAAGT < 41bp 1 0.712434916506069 1 0.993229627609253 experiment 0.575130166987863 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654450 synonymous SNV . 0 hm6A_associated_SNPs_4405 0 0 1 3 71654449 71654465 mRNA hsa-miR-1297 ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACGATGATTGAAAGACACTTA Direct Loss 1 0.780013373260343 1 0.981651544570923 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4406 0 0 1 5 71654519 71654539 mRNA hsa-miR-187 ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACGATGATTGAAAGACACTTA Direct Loss 1 0.780013373260343 1 0.981651544570923 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4406 0 0 1 5 71654518 71654540 mRNA hsa-miR-302a ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACGATGATTGAAAGACACTTA Direct Loss 1 0.780013373260343 1 0.981651544570923 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4406 0 0 1 5 71654511 71654540 mRNA hsa-miR-302b ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACGATGATTGAAAGACACTTA Direct Loss 1 0.780013373260343 1 0.981651544570923 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4406 0 0 1 5 71654516 71654540 mRNA hsa-miR-373 ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACGATGATTGAAAGACACTTA Direct Loss 1 0.780013373260343 1 0.981651544570923 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4406 0 0 1 5 71654519 71654540 mRNA hsa-miR-520d-3p ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACGATGATTGAAAGACACTTAACAGGTAGATACTT < 41bp 1 0.796329295309353 1 0.954381704330444 experiment 0.407341409381293 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4407 0 0 1 5 71654519 71654539 mRNA hsa-miR-187 ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACGATGATTGAAAGACACTTAACAGGTAGATACTT < 41bp 1 0.796329295309353 1 0.954381704330444 experiment 0.407341409381293 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4407 0 0 1 5 71654518 71654540 mRNA hsa-miR-302a ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACGATGATTGAAAGACACTTAACAGGTAGATACTT < 41bp 1 0.796329295309353 1 0.954381704330444 experiment 0.407341409381293 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4407 0 0 1 5 71654511 71654540 mRNA hsa-miR-302b ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACGATGATTGAAAGACACTTAACAGGTAGATACTT < 41bp 1 0.796329295309353 1 0.954381704330444 experiment 0.407341409381293 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4407 0 0 1 5 71654516 71654540 mRNA hsa-miR-373 ZNF638 miRanda miRanda
14034 chr2 71654522 71654522 1 + C G rs145701404 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACGATGATTGAAAGACACTTAACAGGTAGATACTT < 41bp 1 0.796329295309353 1 0.954381704330444 experiment 0.407341409381293 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654522 synonymous SNV . 0 hm6A_associated_SNPs_4407 0 0 1 5 71654519 71654540 mRNA hsa-miR-520d-3p ZNF638 miRanda miRanda
14034 chr2 73453298 73453298 1 + A C rs146478021 73453285 + 73453265 73453305 41 CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCC CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCCCTGAGCC < 41bp 1 0.724987481587012 1 0.90976494550705 experiment 0.550025036825977 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453285 chr2:73453298 . . 0 hm6A_associated_SNPs_4409 0 0 1 2 73453282 73453306 mRNA hsa-miR-24 SMYD5 miRanda miRanda
14034 chr2 73453298 73453298 1 + A C rs146478021 73453285 + 73453265 73453305 41 CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCC CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCCCTGAGCC < 41bp 1 0.724987481587012 1 0.90976494550705 experiment 0.550025036825977 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453285 chr2:73453298 . . 0 hm6A_associated_SNPs_4409 0 0 1 2 73453290 73453311 mRNA hsa-miR-488 SMYD5 miRanda miRanda
14034 chr2 73453305 73453305 1 + C G rs557353784 73453285 + 73453265 73453305 41 CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCC CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCG < 41bp 1 0.695817512027993 1 0.934232711791992 experiment 0.608364975944013 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453285 chr2:73453305 . . 0 hm6A_associated_SNPs_4410 0 0 1 2 73453282 73453306 mRNA hsa-miR-24 SMYD5 miRanda miRanda
14034 chr2 73453305 73453305 1 + C G rs557353784 73453285 + 73453265 73453305 41 CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCC CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCG < 41bp 1 0.695817512027993 1 0.934232711791992 experiment 0.608364975944013 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453285 chr2:73453305 . . 0 hm6A_associated_SNPs_4410 0 0 1 2 73453290 73453311 mRNA hsa-miR-488 SMYD5 miRanda miRanda
14034 chr2 73453728 73453728 1 + C T rs116190631 73453746 + 73453726 73453766 41 CTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT CTTGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT < 41bp 1 0.503015743888107 1 0.6912442445755 experiment 0.993968512223786 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453746 chr2:73453728 . . 0 hm6A_associated_SNPs_4411 0 0 1 2 73453717 73453736 mRNA hsa-miR-124 SMYD5 miRanda miRanda
14034 chr2 73453728 73453728 1 + C T rs116190631 73453746 + 73453726 73453766 41 CTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT CTTGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT < 41bp 1 0.503015743888107 1 0.6912442445755 experiment 0.993968512223786 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453746 chr2:73453728 . . 0 hm6A_associated_SNPs_4411 0 0 1 2 73453716 73453736 mRNA hsa-miR-506 SMYD5 miRanda miRanda
14034 chr2 73453729 73453729 1 + G A rs544546194 73453746 + 73453726 73453766 41 CTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT CTCATGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT < 41bp 1 0.518680073833459 1 0.671960711479187 experiment 0.962639852333083 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453746 chr2:73453729 . . 0 hm6A_associated_SNPs_4412 0 0 1 2 73453717 73453736 mRNA hsa-miR-124 SMYD5 miRanda miRanda
14034 chr2 73453729 73453729 1 + G A rs544546194 73453746 + 73453726 73453766 41 CTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT CTCATGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCT < 41bp 1 0.518680073833459 1 0.671960711479187 experiment 0.962639852333083 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453746 chr2:73453729 . . 0 hm6A_associated_SNPs_4412 0 0 1 2 73453716 73453736 mRNA hsa-miR-506 SMYD5 miRanda miRanda
14034 chr2 74441710 74441710 1 + A G rs114602496 74441719 + 74441699 74441739 41 TCCCAAGTGCTATTGCAATAACAGTTGATACTCATTTTAGG TCCCAAGTGCTGTTGCAATAACAGTTGATACTCATTTTAGG < 41bp 1 0.533299500439208 1 0.215814530849457 experiment 0.933400999121584 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 12 MTHFD2 ENSG00000065911 UTR3 Human protein_coding chr2:74441719 chr2:74441710 . . 0 hm6A_associated_SNPs_4437 0 0 1 5 74441696 74441718 mRNA hsa-miR-25 MTHFD2 miRanda miRanda
14034 chr2 74441710 74441710 1 + A G rs114602496 74441719 + 74441699 74441739 41 TCCCAAGTGCTATTGCAATAACAGTTGATACTCATTTTAGG TCCCAAGTGCTGTTGCAATAACAGTTGATACTCATTTTAGG < 41bp 1 0.533299500439208 1 0.215814530849457 experiment 0.933400999121584 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 12 MTHFD2 ENSG00000065911 UTR3 Human protein_coding chr2:74441719 chr2:74441710 . . 0 hm6A_associated_SNPs_4437 0 0 1 5 74441697 74441718 mRNA hsa-miR-32 MTHFD2 miRanda miRanda
14034 chr2 74441710 74441710 1 + A G rs114602496 74441719 + 74441699 74441739 41 TCCCAAGTGCTATTGCAATAACAGTTGATACTCATTTTAGG TCCCAAGTGCTGTTGCAATAACAGTTGATACTCATTTTAGG < 41bp 1 0.533299500439208 1 0.215814530849457 experiment 0.933400999121584 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 12 MTHFD2 ENSG00000065911 UTR3 Human protein_coding chr2:74441719 chr2:74441710 . . 0 hm6A_associated_SNPs_4437 0 0 1 5 74441697 74441719 mRNA hsa-miR-137 MTHFD2 miRanda miRanda
14034 chr2 74441710 74441710 1 + A G rs114602496 74441719 + 74441699 74441739 41 TCCCAAGTGCTATTGCAATAACAGTTGATACTCATTTTAGG TCCCAAGTGCTGTTGCAATAACAGTTGATACTCATTTTAGG < 41bp 1 0.533299500439208 1 0.215814530849457 experiment 0.933400999121584 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 12 MTHFD2 ENSG00000065911 UTR3 Human protein_coding chr2:74441719 chr2:74441710 . . 0 hm6A_associated_SNPs_4437 0 0 1 5 74441697 74441718 mRNA hsa-miR-363 MTHFD2 miRanda miRanda
14034 chr2 74441710 74441710 1 + A G rs114602496 74441719 + 74441699 74441739 41 TCCCAAGTGCTATTGCAATAACAGTTGATACTCATTTTAGG TCCCAAGTGCTGTTGCAATAACAGTTGATACTCATTTTAGG < 41bp 1 0.533299500439208 1 0.215814530849457 experiment 0.933400999121584 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 12 MTHFD2 ENSG00000065911 UTR3 Human protein_coding chr2:74441719 chr2:74441710 . . 0 hm6A_associated_SNPs_4437 0 0 1 5 74441697 74441718 mRNA hsa-miR-92b MTHFD2 miRanda miRanda
14034 chr2 74441903 74441903 1 + C T rs74334588 74441893 + 74441873 74441913 41 ACCAGATTTATCTAAGTAGAACTGAATTGGCTAGGAAAAAA ACCAGATTTATCTAAGTAGAACTGAATTGGTTAGGAAAAAA < 41bp 1 0.189291126353383 1 0.843932032585144 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 31 MTHFD2 ENSG00000065911 UTR3 Human protein_coding chr2:74441893 chr2:74441903 . . 0 hm6A_associated_SNPs_4438 0 0 1 1 74441888 74441910 mRNA hsa-miR-384 MTHFD2 miRanda miRanda
14034 chr2 74442078 74442078 1 + T C rs192990350 74442062 + 74442042 74442082 41 CCCCATTTTAGTTTTCTAGGACTGAAAGGATTCTTTTCTAC CCCCATTTTAGTTTTCTAGGACTGAAAGGATTCTTTCCTAC < 41bp 1 0.360728139809998 1 0.867218613624573 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MTHFD2 ENSG00000065911 UTR3 Human protein_coding chr2:74442062 chr2:74442078 . . 0 hm6A_associated_SNPs_4439 0 0 1 1 74442060 74442078 mRNA hsa-miR-186 MTHFD2 miRanda miRanda
14034 chr2 75118789 75118789 1 + G A rs116063235 75118777 + 75118757 75118797 41 ATGTTATCCACAAGCAATGGACCTTTGGGGAAGGGGGAGTT ATGTTATCCACAAGCAATGGACCTTTGGGGAAAGGGGAGTT < 41bp 1 0.752970497599776 1 0.944067597389221 experiment 0.494059004800448 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 HK2 ENSG00000159399 UTR3 Human protein_coding chr2:75118777 chr2:75118789 . . 0 hm6A_associated_SNPs_4448 0 0 1 1 75118788 75118809 mRNA hsa-miR-495 HK2 miRanda miRanda
14034 chr2 85282028 85282028 1 + C T rs150390899 85282044 + 85282024 85282064 41 CCTCCGGTGTTCTTCCGAGAACTGTGAAGTCCATGTTCATC CCTCTGGTGTTCTTCCGAGAACTGTGAAGTCCATGTTCATC < 41bp 1 0.385516173058309 1 0.937809586524963 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 5 KCMF1 ENSG00000176407 UTR3 Human protein_coding chr2:85282044 chr2:85282028 . . 0 hm6A_associated_SNPs_4454 0 0 1 1 85282028 85282051 mRNA hsa-miR-145 KCMF1 miRanda miRanda
14034 chr2 85584152 85584152 1 + C T rs137997966 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTTGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC < 41bp 1 0.4236945410261 1 0.909371733665466 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584152 . . 0 hm6A_associated_SNPs_4455 0 0 1 3 85584146 85584169 mRNA hsa-miR-204 ELMOD3 miRanda miRanda
14034 chr2 85584152 85584152 1 + C T rs137997966 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTTGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC < 41bp 1 0.4236945410261 1 0.909371733665466 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584152 . . 0 hm6A_associated_SNPs_4455 0 0 1 3 85584146 85584169 mRNA hsa-miR-211 ELMOD3 miRanda miRanda
14034 chr2 85584152 85584152 1 + C T rs137997966 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTTGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC < 41bp 1 0.4236945410261 1 0.909371733665466 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584152 . . 0 hm6A_associated_SNPs_4455 0 0 1 3 85584150 85584174 mRNA hsa-miR-132 ELMOD3 miRanda miRanda
14034 chr2 85584153 85584153 1 + G A rs149065631 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTCAGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC < 41bp 1 0.395666553835879 1 0.888186454772949 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584153 . . 0 hm6A_associated_SNPs_4456 0 0 1 3 85584146 85584169 mRNA hsa-miR-204 ELMOD3 miRanda miRanda
14034 chr2 85584153 85584153 1 + G A rs149065631 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTCAGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC < 41bp 1 0.395666553835879 1 0.888186454772949 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584153 . . 0 hm6A_associated_SNPs_4456 0 0 1 3 85584146 85584169 mRNA hsa-miR-211 ELMOD3 miRanda miRanda
14034 chr2 85584153 85584153 1 + G A rs149065631 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTCAGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC < 41bp 1 0.395666553835879 1 0.888186454772949 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584153 . . 0 hm6A_associated_SNPs_4456 0 0 1 3 85584150 85584174 mRNA hsa-miR-132 ELMOD3 miRanda miRanda
14034 chr2 85584171 85584171 1 + G A rs144581234 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTCGGATGGCACAAAGGGACTATTTTCTTACTCTTAGTC < 41bp 1 0.380464457427848 1 0.864638328552246 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584171 . . 0 hm6A_associated_SNPs_4457 0 0 1 2 85584154 85584174 mRNA hsa-miR-212 ELMOD3 miRanda miRanda
14034 chr2 85584171 85584171 1 + G A rs144581234 85584168 + 85584148 85584188 41 CCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTC CCCTCGGATGGCACAAAGGGACTATTTTCTTACTCTTAGTC < 41bp 1 0.380464457427848 1 0.864638328552246 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 ELMOD3 ENSG00000115459 UTR5 Human protein_coding chr2:85584168 chr2:85584171 . . 0 hm6A_associated_SNPs_4457 0 0 1 2 85584150 85584174 mRNA hsa-miR-132 ELMOD3 miRanda miRanda
14034 chr2 86439855 86439855 1 + C T rs370852770 86439839 + 86439819 86439859 41 GGACTGAAGTGGGATGGCTGACAGGCACATAACTTACGGGA GGACTGAAGTGGGATGGCTGACAGGCACATAACTTATGGGA < 41bp 1 0.62391709294169 1 0.852523624897003 experiment 0.75216581411662 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86439839 chr2:86439855 . . 0 hm6A_associated_SNPs_4479 0 0 1 2 86439843 86439866 mRNA hsa-miR-204 MRPL35 miRanda miRanda
14034 chr2 86439855 86439855 1 + C T rs370852770 86439839 + 86439819 86439859 41 GGACTGAAGTGGGATGGCTGACAGGCACATAACTTACGGGA GGACTGAAGTGGGATGGCTGACAGGCACATAACTTATGGGA < 41bp 1 0.62391709294169 1 0.852523624897003 experiment 0.75216581411662 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86439839 chr2:86439855 . . 0 hm6A_associated_SNPs_4479 0 0 1 2 86439845 86439866 mRNA hsa-miR-211 MRPL35 miRanda miRanda
14034 chr2 86439855 86439855 1 + C T rs370852770 86439850 + 86439830 86439870 41 GGATGGCTGACAGGCACATAACTTACGGGAAAGGGAATTTC GGATGGCTGACAGGCACATAACTTATGGGAAAGGGAATTTC < 41bp 1 0.493057313824465 1 0.824756860733032 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86439850 chr2:86439855 . . 0 hm6A_associated_SNPs_4480 0 0 1 2 86439843 86439866 mRNA hsa-miR-204 MRPL35 miRanda miRanda
14034 chr2 86439855 86439855 1 + C T rs370852770 86439850 + 86439830 86439870 41 GGATGGCTGACAGGCACATAACTTACGGGAAAGGGAATTTC GGATGGCTGACAGGCACATAACTTATGGGAAAGGGAATTTC < 41bp 1 0.493057313824465 1 0.824756860733032 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86439850 chr2:86439855 . . 0 hm6A_associated_SNPs_4480 0 0 1 2 86439845 86439866 mRNA hsa-miR-211 MRPL35 miRanda miRanda
14034 chr2 86440262 86440262 1 + C G rs193283037 86440274 + 86440254 86440294 41 GTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATCTA GTATTTCCGTGAGTCTTCTAACATATGAAAATTCATATCTA < 41bp 1 0.33649036732909 1 0.00321668386459351 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 9 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86440274 chr2:86440262 . . 0 hm6A_associated_SNPs_4481 0 0 1 2 86440260 86440281 mRNA hsa-miR-190 MRPL35 miRanda miRanda
14034 chr2 86440262 86440262 1 + C G rs193283037 86440274 + 86440254 86440294 41 GTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATCTA GTATTTCCGTGAGTCTTCTAACATATGAAAATTCATATCTA < 41bp 1 0.33649036732909 1 0.00321668386459351 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 9 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86440274 chr2:86440262 . . 0 hm6A_associated_SNPs_4481 0 0 1 2 86440260 86440281 mRNA hsa-miR-190b MRPL35 miRanda miRanda
14034 chr2 86440288 86440288 1 + A G rs77872016 86440274 + 86440254 86440294 41 GTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATCTA GTATTTCCCTGAGTCTTCTAACATATGAAAATTCGTATCTA < 41bp 1 0.321040505181125 1 0.00437059998512268 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86440274 chr2:86440288 . . 0 hm6A_associated_SNPs_4482 0 0 1 1 86440283 86440303 mRNA hsa-miR-653 MRPL35 miRanda miRanda
14034 chr2 86440292 86440292 1 + C T rs184783457 86440274 + 86440254 86440294 41 GTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATCTA GTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATTTA < 41bp 1 0.362120046142986 1 0.00327610969543457 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86440274 chr2:86440292 . . 0 hm6A_associated_SNPs_4483 0 0 1 2 86440290 86440311 mRNA hsa-miR-224 MRPL35 miRanda miRanda
14034 chr2 86440292 86440292 1 + C T rs184783457 86440274 + 86440254 86440294 41 GTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATCTA GTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATTTA < 41bp 1 0.362120046142986 1 0.00327610969543457 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86440274 chr2:86440292 . . 0 hm6A_associated_SNPs_4483 0 0 1 2 86440283 86440303 mRNA hsa-miR-653 MRPL35 miRanda miRanda
14034 chr2 86719418 86719418 1 + A G rs531680078 86719399 + 86719379 86719419 41 TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTAG TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTGG < 41bp 1 0.797029632490913 1 0.737525880336761 experiment 0.405940735018173 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 KDM3A ENSG00000115548 UTR3 Human protein_coding chr2:86719399 chr2:86719418 . . 0 hm6A_associated_SNPs_4486 0 0 1 4 86719398 86719421 mRNA hsa-miR-217 KDM3A miRanda miRanda
14034 chr2 86719418 86719418 1 + A G rs531680078 86719399 + 86719379 86719419 41 TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTAG TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTGG < 41bp 1 0.797029632490913 1 0.737525880336761 experiment 0.405940735018173 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 KDM3A ENSG00000115548 UTR3 Human protein_coding chr2:86719399 chr2:86719418 . . 0 hm6A_associated_SNPs_4486 0 0 1 4 86719400 86719421 mRNA hsa-miR-221 KDM3A miRanda miRanda
14034 chr2 86719418 86719418 1 + A G rs531680078 86719399 + 86719379 86719419 41 TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTAG TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTGG < 41bp 1 0.797029632490913 1 0.737525880336761 experiment 0.405940735018173 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 KDM3A ENSG00000115548 UTR3 Human protein_coding chr2:86719399 chr2:86719418 . . 0 hm6A_associated_SNPs_4486 0 0 1 4 86719397 86719421 mRNA hsa-miR-222 KDM3A miRanda miRanda
14034 chr2 86719418 86719418 1 + A G rs531680078 86719399 + 86719379 86719419 41 TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTAG TATATTTCTAGTGTTTACAGACAGTAAATGTGTATATGTGG < 41bp 1 0.797029632490913 1 0.737525880336761 experiment 0.405940735018173 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 KDM3A ENSG00000115548 UTR3 Human protein_coding chr2:86719399 chr2:86719418 . . 0 hm6A_associated_SNPs_4486 0 0 1 4 86719399 86719419 mRNA hsa-miR-448 KDM3A miRanda miRanda
14034 chr2 99204695 99204695 1 + G A rs149329520 99204685 + 99204665 99204705 41 TAAGACTTTATTAGAAGGTAACACCTGCAAGGTACCCCACA TAAGACTTTATTAGAAGGTAACACCTGCAAAGTACCCCACA < 41bp 1 0.19890118558619 1 0.0509286522865295 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 INPP4A ENSG00000040933 UTR3 Human protein_coding chr2:99204685 chr2:99204695 . . 0 hm6A_associated_SNPs_4527 0 0 0 1 99204686 99204707 mRNA hsa-miR-299-3p INPP4A miRanda miRanda
14034 chr2 100016066 100016066 1 + G A rs144790325 100016056 + 100016036 100016076 41 AAGAAACTTACACTGGTTTGACAGTGGTCAGTTACATGTCC AAGAAACTTACACTGGTTTGACAGTGGTCAATTACATGTCC < 41bp 1 0.783849421299015 1 0.8635094165802 experiment 0.432301157401971 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 31 EIF5B ENSG00000158417 UTR3 Human protein_coding chr2:100016056 chr2:100016066 . . 0 hm6A_associated_SNPs_4537 0 0 1 2 100016065 100016087 mRNA hsa-miR-206 EIF5B miRanda miRanda
14034 chr2 100016066 100016066 1 + G A rs144790325 100016056 + 100016036 100016076 41 AAGAAACTTACACTGGTTTGACAGTGGTCAGTTACATGTCC AAGAAACTTACACTGGTTTGACAGTGGTCAATTACATGTCC < 41bp 1 0.783849421299015 1 0.8635094165802 experiment 0.432301157401971 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 31 EIF5B ENSG00000158417 UTR3 Human protein_coding chr2:100016056 chr2:100016066 . . 0 hm6A_associated_SNPs_4537 0 0 1 2 100016060 100016081 mRNA hsa-miR-491-5p EIF5B miRanda miRanda
14034 chr2 100016487 100016487 1 + A G rs151139795 100016499 + 100016479 100016519 41 TCATCACAATTCTAAACCAAACTACCAATAAAGAAAACAGA TCATCACAGTTCTAAACCAAACTACCAATAAAGAAAACAGA < 41bp 1 0.309387001623835 1 0.0363001525402069 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 EIF5B ENSG00000158417 UTR3 Human protein_coding chr2:100016499 chr2:100016487 . . 0 hm6A_associated_SNPs_4538 0 0 1 2 100016483 100016506 mRNA hsa-miR-196a EIF5B miRanda miRanda
14034 chr2 100016487 100016487 1 + A G rs151139795 100016499 + 100016479 100016519 41 TCATCACAATTCTAAACCAAACTACCAATAAAGAAAACAGA TCATCACAGTTCTAAACCAAACTACCAATAAAGAAAACAGA < 41bp 1 0.309387001623835 1 0.0363001525402069 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 EIF5B ENSG00000158417 UTR3 Human protein_coding chr2:100016499 chr2:100016487 . . 0 hm6A_associated_SNPs_4538 0 0 1 2 100016483 100016506 mRNA hsa-miR-196b EIF5B miRanda miRanda
14034 chr2 101612786 101612786 1 + T C rs188597558 101612774 + 101612754 101612794 41 GCCCCTAAATAAAACACTGGACTATTTCCTGTTTACTTCAT GCCCCTAAATAAAACACTGGACTATTTCCTGTCTACTTCAT < 41bp 1 0.762778568229582 1 0.991134226322174 experiment 0.474442863540836 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 NPAS2 ENSG00000223947 ncRNA_intronic Human antisense chr2:101612774 chr2:101612786 . . 0 hm6A_associated_SNPs_4543 0 0 0 6 101612769 101612790 mRNA hsa-miR-30a NPAS2 miRanda miRanda
14034 chr2 101612786 101612786 1 + T C rs188597558 101612774 + 101612754 101612794 41 GCCCCTAAATAAAACACTGGACTATTTCCTGTTTACTTCAT GCCCCTAAATAAAACACTGGACTATTTCCTGTCTACTTCAT < 41bp 1 0.762778568229582 1 0.991134226322174 experiment 0.474442863540836 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 NPAS2 ENSG00000223947 ncRNA_intronic Human antisense chr2:101612774 chr2:101612786 . . 0 hm6A_associated_SNPs_4543 0 0 0 6 101612768 101612790 mRNA hsa-miR-30c NPAS2 miRanda miRanda
14034 chr2 101612786 101612786 1 + T C rs188597558 101612774 + 101612754 101612794 41 GCCCCTAAATAAAACACTGGACTATTTCCTGTTTACTTCAT GCCCCTAAATAAAACACTGGACTATTTCCTGTCTACTTCAT < 41bp 1 0.762778568229582 1 0.991134226322174 experiment 0.474442863540836 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 NPAS2 ENSG00000223947 ncRNA_intronic Human antisense chr2:101612774 chr2:101612786 . . 0 hm6A_associated_SNPs_4543 0 0 0 6 101612769 101612790 mRNA hsa-miR-30d NPAS2 miRanda miRanda
14034 chr2 101612786 101612786 1 + T C rs188597558 101612774 + 101612754 101612794 41 GCCCCTAAATAAAACACTGGACTATTTCCTGTTTACTTCAT GCCCCTAAATAAAACACTGGACTATTTCCTGTCTACTTCAT < 41bp 1 0.762778568229582 1 0.991134226322174 experiment 0.474442863540836 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 NPAS2 ENSG00000223947 ncRNA_intronic Human antisense chr2:101612774 chr2:101612786 . . 0 hm6A_associated_SNPs_4543 0 0 0 6 101612768 101612790 mRNA hsa-miR-30b NPAS2 miRanda miRanda
14034 chr2 101612786 101612786 1 + T C rs188597558 101612774 + 101612754 101612794 41 GCCCCTAAATAAAACACTGGACTATTTCCTGTTTACTTCAT GCCCCTAAATAAAACACTGGACTATTTCCTGTCTACTTCAT < 41bp 1 0.762778568229582 1 0.991134226322174 experiment 0.474442863540836 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 NPAS2 ENSG00000223947 ncRNA_intronic Human antisense chr2:101612774 chr2:101612786 . . 0 hm6A_associated_SNPs_4543 0 0 0 6 101612783 101612806 mRNA hsa-miR-130b NPAS2 miRanda miRanda
14034 chr2 101612786 101612786 1 + T C rs188597558 101612774 + 101612754 101612794 41 GCCCCTAAATAAAACACTGGACTATTTCCTGTTTACTTCAT GCCCCTAAATAAAACACTGGACTATTTCCTGTCTACTTCAT < 41bp 1 0.762778568229582 1 0.991134226322174 experiment 0.474442863540836 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 NPAS2 ENSG00000223947 ncRNA_intronic Human antisense chr2:101612774 chr2:101612786 . . 0 hm6A_associated_SNPs_4543 0 0 0 6 101612769 101612790 mRNA hsa-miR-30e NPAS2 miRanda miRanda
14034 chr2 101886031 101886031 1 + T C rs114901762 101886023 + 101886003 101886043 41 AAGTTTTGCTTTCTTGAATGACTTTTTCTGTGAGATGAATT AAGTTTTGCTTTCTTGAATGACTTTTTCCGTGAGATGAATT < 41bp 1 0.572604548269172 1 0.937971174716949 experiment 0.854790903461656 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 CNOT11 ENSG00000158435 UTR3 Human protein_coding chr2:101886023 chr2:101886031 . . 0 hm6A_associated_SNPs_4546 0 0 1 4 101886016 101886036 mRNA hsa-miR-27a C2orf29 miRanda miRanda
14034 chr2 101886031 101886031 1 + T C rs114901762 101886023 + 101886003 101886043 41 AAGTTTTGCTTTCTTGAATGACTTTTTCTGTGAGATGAATT AAGTTTTGCTTTCTTGAATGACTTTTTCCGTGAGATGAATT < 41bp 1 0.572604548269172 1 0.937971174716949 experiment 0.854790903461656 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 CNOT11 ENSG00000158435 UTR3 Human protein_coding chr2:101886023 chr2:101886031 . . 0 hm6A_associated_SNPs_4546 0 0 1 4 101886020 101886040 mRNA hsa-miR-216a C2orf29 miRanda miRanda
14034 chr2 101886031 101886031 1 + T C rs114901762 101886023 + 101886003 101886043 41 AAGTTTTGCTTTCTTGAATGACTTTTTCTGTGAGATGAATT AAGTTTTGCTTTCTTGAATGACTTTTTCCGTGAGATGAATT < 41bp 1 0.572604548269172 1 0.937971174716949 experiment 0.854790903461656 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 CNOT11 ENSG00000158435 UTR3 Human protein_coding chr2:101886023 chr2:101886031 . . 0 hm6A_associated_SNPs_4546 0 0 1 4 101886016 101886036 mRNA hsa-miR-27b C2orf29 miRanda miRanda
14034 chr2 101886031 101886031 1 + T C rs114901762 101886023 + 101886003 101886043 41 AAGTTTTGCTTTCTTGAATGACTTTTTCTGTGAGATGAATT AAGTTTTGCTTTCTTGAATGACTTTTTCCGTGAGATGAATT < 41bp 1 0.572604548269172 1 0.937971174716949 experiment 0.854790903461656 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 CNOT11 ENSG00000158435 UTR3 Human protein_coding chr2:101886023 chr2:101886031 . . 0 hm6A_associated_SNPs_4546 0 0 1 4 101886014 101886037 mRNA hsa-miR-342-3p C2orf29 miRanda miRanda
14034 chr2 102510659 102510659 1 + T G rs570713513 102510639 + 102510619 102510659 41 TGGCAAAATTACACAAGAAAACAGTATTGCAATGACACCAT TGGCAAAATTACACAAGAAAACAGTATTGCAATGACACCAG < 41bp 1 0.241856928230856 1 0.819972276687622 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 MAP4K4 ENSG00000071054;ENSG00000233404 UTR3 Human other chr2:102510639 chr2:102510659 . . 0 hm6A_associated_SNPs_4548 0 0 1 1 102510659 102510682 mRNA hsa-miR-181d MAP4K4 miRanda miRanda
14034 chr2 102796314 102796314 1 + T A rs200030219 102796321 + 102796301 102796341 41 TTTTCCAATAAAATTTTCAAACTTTGTACTGTTATCCTGAG TTTTCCAATAAAAATTTCAAACTTTGTACTGTTATCCTGAG < 41bp 1 0.0134546911616636 1 0.818889558315277 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 14 IL1R1 ENSG00000226925 ncRNA_intronic Human antisense chr2:102796321 chr2:102796314 . . 0 hm6A_associated_SNPs_4552 0 0 0 5 102796309 102796333 mRNA hsa-miR-101 IL1R1 miRanda miRanda
14034 chr2 102796314 102796314 1 + T A rs200030219 102796321 + 102796301 102796341 41 TTTTCCAATAAAATTTTCAAACTTTGTACTGTTATCCTGAG TTTTCCAATAAAAATTTCAAACTTTGTACTGTTATCCTGAG < 41bp 1 0.0134546911616636 1 0.818889558315277 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 14 IL1R1 ENSG00000226925 ncRNA_intronic Human antisense chr2:102796321 chr2:102796314 . . 0 hm6A_associated_SNPs_4552 0 0 0 5 102796314 102796333 mRNA hsa-miR-212 IL1R1 miRanda miRanda
14034 chr2 102796314 102796314 1 + T A rs200030219 102796321 + 102796301 102796341 41 TTTTCCAATAAAATTTTCAAACTTTGTACTGTTATCCTGAG TTTTCCAATAAAAATTTCAAACTTTGTACTGTTATCCTGAG < 41bp 1 0.0134546911616636 1 0.818889558315277 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 14 IL1R1 ENSG00000226925 ncRNA_intronic Human antisense chr2:102796321 chr2:102796314 . . 0 hm6A_associated_SNPs_4552 0 0 0 5 102796313 102796333 mRNA hsa-miR-132 IL1R1 miRanda miRanda
14034 chr2 102796314 102796314 1 + T A rs200030219 102796321 + 102796301 102796341 41 TTTTCCAATAAAATTTTCAAACTTTGTACTGTTATCCTGAG TTTTCCAATAAAAATTTCAAACTTTGTACTGTTATCCTGAG < 41bp 1 0.0134546911616636 1 0.818889558315277 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 14 IL1R1 ENSG00000226925 ncRNA_intronic Human antisense chr2:102796321 chr2:102796314 . . 0 hm6A_associated_SNPs_4552 0 0 0 5 102796314 102796333 mRNA hsa-miR-144 IL1R1 miRanda miRanda
14034 chr2 102796314 102796314 1 + T A rs200030219 102796321 + 102796301 102796341 41 TTTTCCAATAAAATTTTCAAACTTTGTACTGTTATCCTGAG TTTTCCAATAAAAATTTCAAACTTTGTACTGTTATCCTGAG < 41bp 1 0.0134546911616636 1 0.818889558315277 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 14 IL1R1 ENSG00000226925 ncRNA_intronic Human antisense chr2:102796321 chr2:102796314 . . 0 hm6A_associated_SNPs_4552 0 0 0 5 102796297 102796316 mRNA hsa-miR-590-3p IL1R1 miRanda miRanda
14034 chr2 102959976 102959976 1 + G A rs139756621 102959964 + 102959944 102959984 41 GTTCCAAGAGATCCATCAAGACAATGGGAATGGCCTGTGCC GTTCCAAGAGATCCATCAAGACAATGGGAATGACCTGTGCC < 41bp 1 0.280809196042488 1 0.904742777347565 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 33 IL1RL1 ENSG00000115602 UTR3 Human protein_coding chr2:102959964 chr2:102959976 . . 0 hm6A_associated_SNPs_4553 0 0 0 1 102959966 102959987 mRNA hsa-miR-183 IL1RL1 miRanda miRanda
14034 chr2 103068787 103068787 1 + G A rs7559479 103068798 + 103068778 103068818 41 GACAATGGAGTGGGATTGAGACTGTGGTTTAGAGCCTTTGA GACAATGGAATGGGATTGAGACTGTGGTTTAGAGCCTTTGA < 41bp 1 0.108588155230538 1 0.970688045024872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 IL18RAP ENSG00000115607 UTR3 Human protein_coding chr2:103068798 chr2:103068787 . . 0 hm6A_associated_SNPs_4558 0 1 0 1 103068766 103068788 mRNA hsa-miR-136 IL18RAP miRanda miRanda
14034 chr2 109125573 109125573 1 + T C rs192380834 109125561 + 109125541 109125581 41 ATGCATCTATTTCAGAGCTGACATGAAGAGTTTAGTTTTTT ATGCATCTATTTCAGAGCTGACATGAAGAGTTCAGTTTTTT < 41bp 1 0.434172276874202 1 0.826668679714203 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 GCC2-AS1 ENSG00000214184 ncRNA_intronic Human antisense chr2:109125561 chr2:109125573 . . 0 hm6A_associated_SNPs_4572 0 0 0 1 109125570 109125591 mRNA hsa-miR-340 GCC2 miRanda miRanda
14034 chr2 111924248 111924248 1 + G A rs145582217 111924251 + 111924231 111924271 41 TTTGTAAAAAGTGTCCTGTGACTTAACACAGAAACGCAATA TTTGTAAAAAGTGTCCTATGACTTAACACAGAAACGCAATA < 41bp 1 0.0738364169654307 1 0.722308039665222 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 BCL2L11 ENSG00000153094 UTR3 Human protein_coding chr2:111924251 chr2:111924248 . . 0 hm6A_associated_SNPs_4583 0 0 1 2 111924236 111924255 mRNA hsa-miR-224 BCL2L11 miRanda miRanda
14034 chr2 111924248 111924248 1 + G A rs145582217 111924251 + 111924231 111924271 41 TTTGTAAAAAGTGTCCTGTGACTTAACACAGAAACGCAATA TTTGTAAAAAGTGTCCTATGACTTAACACAGAAACGCAATA < 41bp 1 0.0738364169654307 1 0.722308039665222 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 BCL2L11 ENSG00000153094 UTR3 Human protein_coding chr2:111924251 chr2:111924248 . . 0 hm6A_associated_SNPs_4583 0 0 1 2 111924225 111924249 mRNA hsa-miR-873 BCL2L11 miRanda miRanda
14034 chr2 112945326 112945326 1 + A G rs74839038 112945341 + 112945321 112945361 41 TATGCACTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG TATGCGCTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG < 41bp 1 0.302138378364345 1 0.872200429439545 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 6 FBLN7 ENSG00000144152 UTR3 Human protein_coding chr2:112945341 chr2:112945326 . . 0 hm6A_associated_SNPs_4590 0 0 1 6 112945305 112945328 mRNA hsa-miR-19a FBLN7 miRanda miRanda
14034 chr2 112945326 112945326 1 + A G rs74839038 112945341 + 112945321 112945361 41 TATGCACTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG TATGCGCTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG < 41bp 1 0.302138378364345 1 0.872200429439545 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 6 FBLN7 ENSG00000144152 UTR3 Human protein_coding chr2:112945341 chr2:112945326 . . 0 hm6A_associated_SNPs_4590 0 0 1 6 112945305 112945328 mRNA hsa-miR-19b FBLN7 miRanda miRanda
14034 chr2 112945326 112945326 1 + A G rs74839038 112945341 + 112945321 112945361 41 TATGCACTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG TATGCGCTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG < 41bp 1 0.302138378364345 1 0.872200429439545 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 6 FBLN7 ENSG00000144152 UTR3 Human protein_coding chr2:112945341 chr2:112945326 . . 0 hm6A_associated_SNPs_4590 0 0 1 6 112945307 112945329 mRNA hsa-miR-301a FBLN7 miRanda miRanda
14034 chr2 112945326 112945326 1 + A G rs74839038 112945341 + 112945321 112945361 41 TATGCACTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG TATGCGCTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG < 41bp 1 0.302138378364345 1 0.872200429439545 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 6 FBLN7 ENSG00000144152 UTR3 Human protein_coding chr2:112945341 chr2:112945326 . . 0 hm6A_associated_SNPs_4590 0 0 1 6 112945309 112945329 mRNA hsa-miR-130b FBLN7 miRanda miRanda
14034 chr2 112945326 112945326 1 + A G rs74839038 112945341 + 112945321 112945361 41 TATGCACTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG TATGCGCTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG < 41bp 1 0.302138378364345 1 0.872200429439545 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 6 FBLN7 ENSG00000144152 UTR3 Human protein_coding chr2:112945341 chr2:112945326 . . 0 hm6A_associated_SNPs_4590 0 0 1 6 112945307 112945329 mRNA hsa-miR-454 FBLN7 miRanda miRanda
14034 chr2 112945326 112945326 1 + A G rs74839038 112945341 + 112945321 112945361 41 TATGCACTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG TATGCGCTAACTTTCTTAAAACTTTTTCATCCAGGGGATGG < 41bp 1 0.302138378364345 1 0.872200429439545 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 6 FBLN7 ENSG00000144152 UTR3 Human protein_coding chr2:112945341 chr2:112945326 . . 0 hm6A_associated_SNPs_4590 0 0 1 6 112945307 112945329 mRNA hsa-miR-301b FBLN7 miRanda miRanda
14034 chr2 113333483 113333483 1 + A G rs553100028 113333480 + 113333460 113333500 41 TGAATCTCTCTGGTAGATTAACTATTGACAATGATTTTCTG TGAATCTCTCTGGTAGATTAACTGTTGACAATGATTTTCTG < 41bp 1 0.642294893867583 1 0.859446227550507 experiment 0.715410212264834 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 POLR1B ENSG00000125630 UTR3 Human protein_coding chr2:113333480 chr2:113333483 . . 0 hm6A_associated_SNPs_4596 0 0 1 1 113333473 113333493 mRNA hsa-miR-219-5p POLR1B miRanda miRanda
14034 chr2 113334645 113334645 1 + G A rs527732074 113334646 + 113334626 113334666 41 TTTCTGCAAATATTCTGGTGACTTATCTTTGGCCATTATAA TTTCTGCAAATATTCTGGTAACTTATCTTTGGCCATTATAA < 41bp 1 0.0632542983135574 1 0.010520339012146 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 POLR1B ENSG00000125630 downstream Human protein_coding chr2:113334646 chr2:113334645 . . 0 hm6A_associated_SNPs_4599 0 0 1 1 113334628 113334650 mRNA hsa-miR-224 POLR1B miRanda miRanda
14034 chr2 113346480 113346480 1 + G A rs41278942 113346494 + 113346474 113346514 41 TCTGACGGCAGGAAAACTGGACATGAATGACTGCCCCCACG TCTGACAGCAGGAAAACTGGACATGAATGACTGCCCCCACG < 41bp 1 0.739277353248608 1 0.917174696922302 experiment 0.521445293502784 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 7 CHCHD5 ENSG00000125611 UTR3 Human protein_coding chr2:113346494 chr2:113346480 . . 0 hm6A_associated_SNPs_4600 0 0 1 1 113346473 113346495 mRNA hsa-miR-145 CHCHD5 miRanda miRanda
14034 chr2 113420693 113420693 1 + C G rs143019736 113420685 + 113420665 113420705 41 GAAGAATGATTACAGTGTTAACAGAAGACTGACAAGAGTCT GAAGAATGATTACAGTGTTAACAGAAGAGTGACAAGAGTCT < 41bp 1 0.601302438450215 1 0.590457022190094 experiment 0.79739512309957 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 29 SLC20A1 ENSG00000144136 UTR3 Human protein_coding chr2:113420685 chr2:113420693 . . 0 hm6A_associated_SNPs_4609 0 0 1 1 113420678 113420698 mRNA hsa-miR-223 SLC20A1 miRanda miRanda
14034 chr2 113420693 113420693 1 + C G rs143019736 113420692 + 113420672 113420712 41 GATTACAGTGTTAACAGAAGACTGACAAGAGTCTTTTTATT GATTACAGTGTTAACAGAAGAGTGACAAGAGTCTTTTTATT Direct Loss 1 0.711191887283479 1 0.664566040039062 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 SLC20A1 ENSG00000144136 UTR3 Human protein_coding chr2:113420692 chr2:113420693 . . 0 hm6A_associated_SNPs_4610 0 0 1 1 113420678 113420698 mRNA hsa-miR-223 SLC20A1 miRanda miRanda
14034 chr2 113890610 113890610 1 + C T rs4252041 113890601 + 113890581 113890621 41 CACAACAACCTGGTCACAGGACTCTGCCTCCTCTTCAACTG CACAACAACCTGGTCACAGGACTCTGCCTTCTCTTCAACTG < 41bp 1 0.0661400261848424 1 0.995567560195923 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 IL1RN ENSG00000136689 UTR3 Human protein_coding chr2:113890601 chr2:113890610 . . 0 hm6A_associated_SNPs_4616 1 0 0 1 113890603 113890624 mRNA hsa-miR-223 IL1RN miRanda miRanda
14034 chr2 113959358 113959358 1 + G A rs45540547 113959341 + 113959321 113959361 41 ATTTCCTAGACTTGCTGAGAACTCAGCACTTGTTTGAGAAC ATTTCCTAGACTTGCTGAGAACTCAGCACTTGTTTGAAAAC < 41bp 1 0.261332260169417 1 0.830849528312683 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 38 PSD4 ENSG00000125637 UTR3 Human protein_coding chr2:113959341 chr2:113959358 . . 0 hm6A_associated_SNPs_4623 0 0 1 1 113959339 113959359 mRNA hsa-miR-371-5p PSD4 miRanda miRanda
14034 chr2 114715533 114715533 1 + G A rs6642 114715516 + 114715496 114715536 41 TCAAAAAATAGCCTCATGAGACTTGGCATACACACTCGTGG TCAAAAAATAGCCTCATGAGACTTGGCATACACACTCATGG < 41bp 1 0.30000140720096 1 0.13894110918045 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 ACTR3 ENSG00000115091 UTR3 Human protein_coding chr2:114715516 chr2:114715533 . . 0 hm6A_associated_SNPs_4631 0 0 1 1 114715524 114715547 mRNA hsa-miR-191 ACTR3 miRanda miRanda
14034 chr2 118589101 118589101 1 + G A rs142680143 118589084 + 118589064 118589104 41 CATTTGGTAACATAACAAAGACTTTCATACAAAGAACGATG CATTTGGTAACATAACAAAGACTTTCATACAAAGAACAATG < 41bp 1 0.252356502364303 1 0.974479556083679 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 DDX18 ENSG00000088205 UTR3 Human protein_coding chr2:118589084 chr2:118589101 . . 0 hm6A_associated_SNPs_4639 0 0 1 1 118589091 118589113 mRNA hsa-miR-28-5p DDX18 miRanda miRanda
14034 chr2 118865998 118865998 1 + C T rs189296218 118865978 + 118865958 118865998 41 ATATACCAACAAAACTTCAGACTGTAAAATTGCCAGGATGC ATATACCAACAAAACTTCAGACTGTAAAATTGCCAGGATGT < 41bp 1 0.783502068885467 1 0.948322534561157 experiment 0.432995862229065 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 INSIG2 ENSG00000125629 UTR3 Human protein_coding chr2:118865978 chr2:118865998 . . 0 hm6A_associated_SNPs_4643 0 0 1 1 118865979 118866002 mRNA hsa-miR-217 INSIG2 miRanda miRanda
14034 chr2 120021014 120021014 1 + G A rs140893688 120021007 + 120020987 120021027 41 TGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTT TGGTGGTGCAAAGTGGTATAACTGTGTACAAATAGGAGGTT < 41bp 1 0.730184637461541 1 0.889817357063293 experiment 0.539630725076917 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 STEAP3 ENSG00000115107 UTR3 Human protein_coding chr2:120021007 chr2:120021014 . . 0 hm6A_associated_SNPs_4651 0 0 1 1 120021013 120021032 mRNA hsa-miR-371-5p STEAP3 miRanda miRanda
14034 chr2 120021737 120021737 1 + G A rs140786063 120021746 + 120021726 120021766 41 TGGCGATGAGCGTCCTTTAAACCACTGTGCCTTCTCACCCT TGGCGATGAGCATCCTTTAAACCACTGTGCCTTCTCACCCT < 41bp 1 0.226814925578707 1 0.532337546348572 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 STEAP3 ENSG00000115107 UTR3 Human protein_coding chr2:120021746 chr2:120021737 . . 0 hm6A_associated_SNPs_4653 0 0 1 2 120021735 120021755 mRNA hsa-miR-128 STEAP3 miRanda miRanda
14034 chr2 120021737 120021737 1 + G A rs140786063 120021746 + 120021726 120021766 41 TGGCGATGAGCGTCCTTTAAACCACTGTGCCTTCTCACCCT TGGCGATGAGCATCCTTTAAACCACTGTGCCTTCTCACCCT < 41bp 1 0.226814925578707 1 0.532337546348572 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 STEAP3 ENSG00000115107 UTR3 Human protein_coding chr2:120021746 chr2:120021737 . . 0 hm6A_associated_SNPs_4653 0 0 1 2 120021731 120021752 mRNA hsa-miR-140-5p STEAP3 miRanda miRanda
14034 chr2 120022977 120022977 1 + G A rs3731602 120022970 + 120022950 120022990 41 GGGCTGTGTACTGGGCCCTGACTGTGCGTCCACTGCTGTCT GGGCTGTGTACTGGGCCCTGACTGTGCATCCACTGCTGTCT < 41bp 1 0.47850760955765 1 0.507901072502136 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 28 STEAP3 ENSG00000115107 UTR3 Human protein_coding chr2:120022970 chr2:120022977 . . 0 hm6A_associated_SNPs_4656 0 0 1 1 120022970 120022994 mRNA hsa-miR-7 STEAP3 miRanda miRanda
14034 chr2 120130054 120130054 1 + C A rs8192508 120130036 + 120130016 120130056 41 CTGCTCACCATACGGCTCTAACAGATTAGGGGCTAAAACGA CTGCTCACCATACGGCTCTAACAGATTAGGGGCTAAAAAGA < 41bp 1 0.401690766981529 1 0.583806216716766 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 39 DBI ENSG00000155368 UTR3 Human protein_coding chr2:120130036 chr2:120130054 . . 0 hm6A_associated_SNPs_4657 0 0 1 1 120130044 120130065 mRNA hsa-miR-223 DBI miRanda miRanda
14034 chr2 120130054 120130054 1 + C A rs8192508 120130063 + 120130043 120130083 41 AGGGGCTAAAACGATTACTGACTTTCCTTGAGTAGTTTTTA AGGGGCTAAAAAGATTACTGACTTTCCTTGAGTAGTTTTTA < 41bp 1 0.282779710258714 1 0.841004490852356 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 12 DBI ENSG00000155368 UTR3 Human protein_coding chr2:120130063 chr2:120130054 . . 0 hm6A_associated_SNPs_4658 0 0 1 1 120130044 120130065 mRNA hsa-miR-223 DBI miRanda miRanda
14034 chr2 120130074 120130074 1 + G A rs112513030 120130063 + 120130043 120130083 41 AGGGGCTAAAACGATTACTGACTTTCCTTGAGTAGTTTTTA AGGGGCTAAAACGATTACTGACTTTCCTTGAATAGTTTTTA < 41bp 1 0.288984379500513 1 0.877491772174835 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 DBI ENSG00000155368 UTR3 Human protein_coding chr2:120130063 chr2:120130074 . . 0 hm6A_associated_SNPs_4659 0 0 1 1 120130072 120130094 mRNA hsa-miR-876-5p DBI miRanda miRanda
14034 chr2 121052264 121052264 1 + G T rs564573867 121052278 + 121052258 121052298 41 TTTTTTGAATAAAAAAGCAGACAAATAGACTTTCTCGGGAT TTTTTTTAATAAAAAAGCAGACAAATAGACTTTCTCGGGAT < 41bp 1 0.170246505216836 1 0.797574818134308 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 RALB ENSG00000144118 UTR3 Human protein_coding chr2:121052278 chr2:121052264 . . 0 hm6A_associated_SNPs_4670 0 0 1 1 121052258 121052280 mRNA hsa-miR-346 RALB miRanda miRanda
14034 chr2 121052268 121052268 1 + A T rs1137385 121052278 + 121052258 121052298 41 TTTTTTGAATAAAAAAGCAGACAAATAGACTTTCTCGGGAT TTTTTTGAATTAAAAAGCAGACAAATAGACTTTCTCGGGAT < 41bp 1 0.176636206267785 1 0.766600906848907 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 11 RALB ENSG00000144118 UTR3 Human protein_coding chr2:121052278 chr2:121052268 . . 0 hm6A_associated_SNPs_4671 0 0 1 1 121052258 121052280 mRNA hsa-miR-346 RALB miRanda miRanda
14034 chr2 127443680 127443680 1 + G A rs28387190 127443670 + 127443650 127443690 41 ATGGGCCGGGAAATGTAAAGACCAGCCCACGCAGGAAAAAA ATGGGCCGGGAAATGTAAAGACCAGCCCACACAGGAAAAAA < 41bp 1 0.0593008644533978 1 0.980805993080139 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 31 GYPC ENSG00000136732 intronic Human protein_coding chr2:127443670 chr2:127443680 . . 0 hm6A_associated_SNPs_4675 0 0 0 1 127443663 127443685 mRNA hsa-miR-370 GYPC miRanda miRanda
14034 chr2 128459970 128459970 1 + C G rs13431323 128459978 + 128459958 128459998 41 ACTTGGCACACGCTCTGAAAACTGAGATTTTGTCATTGAAC ACTTGGCACACGGTCTGAAAACTGAGATTTTGTCATTGAAC < 41bp 1 0.793977777735397 1 0.998320698738098 experiment 0.412044444529206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 13 SFT2D3 ENSG00000136709;ENSG00000173349 UTR3 Human other chr2:128459978 chr2:128459970 . . 0 hm6A_associated_SNPs_4678 0 0 1 2 128459965 128459987 mRNA hsa-miR-216a SFT2D3 miRanda miRanda
14034 chr2 128459970 128459970 1 + C G rs13431323 128459978 + 128459958 128459998 41 ACTTGGCACACGCTCTGAAAACTGAGATTTTGTCATTGAAC ACTTGGCACACGGTCTGAAAACTGAGATTTTGTCATTGAAC < 41bp 1 0.793977777735397 1 0.998320698738098 experiment 0.412044444529206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 13 SFT2D3 ENSG00000136709;ENSG00000173349 UTR3 Human other chr2:128459978 chr2:128459970 . . 0 hm6A_associated_SNPs_4678 0 0 1 2 128459962 128459985 mRNA hsa-miR-145 SFT2D3 miRanda miRanda
14034 chr2 128460699 128460699 1 + A G rs184208687 128460691 + 128460671 128460711 41 TGCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAA TGCCAGAAGGTATGAGCCTAACATTCTGGTGAGTCCAGAAA < 41bp 1 0.210194459839914 1 0.910534977912903 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 29 SFT2D3 ENSG00000136709;ENSG00000173349 UTR3 Human other chr2:128460691 chr2:128460699 . . 0 hm6A_associated_SNPs_4679 0 0 1 2 128460692 128460709 mRNA hsa-miR-378 SFT2D3 miRanda miRanda
14034 chr2 128460699 128460699 1 + A G rs184208687 128460691 + 128460671 128460711 41 TGCCAGAAGGTATGAGCCTAACATTCTGATGAGTCCAGAAA TGCCAGAAGGTATGAGCCTAACATTCTGGTGAGTCCAGAAA < 41bp 1 0.210194459839914 1 0.910534977912903 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 29 SFT2D3 ENSG00000136709;ENSG00000173349 UTR3 Human other chr2:128460691 chr2:128460699 . . 0 hm6A_associated_SNPs_4679 0 0 1 2 128460691 128460709 mRNA hsa-miR-422a SFT2D3 miRanda miRanda
14034 chr2 128948822 128948822 1 + A G rs533152840 128948811 + 128948791 128948831 41 GGTAATATATTGATGTGCAGACTTTTAAGAAATCTTAGTCT GGTAATATATTGATGTGCAGACTTTTAAGAAGTCTTAGTCT < 41bp 1 0.58708310799633 1 0.304388582706451 experiment 0.825833784007341 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 UGGT1 ENSG00000136731 UTR3 Human protein_coding chr2:128948811 chr2:128948822 . . 0 hm6A_associated_SNPs_4685 0 0 1 1 128948814 128948834 mRNA hsa-miR-499-5p UGGT1 miRanda miRanda
14034 chr2 128948831 128948831 1 + T A rs181300233 128948811 + 128948791 128948831 41 GGTAATATATTGATGTGCAGACTTTTAAGAAATCTTAGTCT GGTAATATATTGATGTGCAGACTTTTAAGAAATCTTAGTCA < 41bp 1 0.623919452701029 1 0.348981261253357 experiment 0.752161094597942 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 UGGT1 ENSG00000136731 UTR3 Human protein_coding chr2:128948811 chr2:128948831 . . 0 hm6A_associated_SNPs_4686 0 0 1 1 128948814 128948834 mRNA hsa-miR-499-5p UGGT1 miRanda miRanda
14034 chr2 130739859 130739859 1 + T A rs182966748 130739878 + 130739858 130739898 41 ATTGCTGTGTAAGCTAATAAACACATTTGTAAATACATTGT AATGCTGTGTAAGCTAATAAACACATTTGTAAATACATTGT < 41bp 1 0.23031486872898 1 0.00853762030601501 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 RAB6C ENSG00000222014 UTR3 Human protein_coding chr2:130739878 chr2:130739859 . . 0 hm6A_associated_SNPs_4687 0 0 0 1 130739842 130739861 mRNA hsa-miR-216a RAB6C miRanda miRanda
14034 chr2 131104117 131104117 1 + A G rs116215643 131104099 + 131104079 131104119 41 TCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACT TCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAGCT < 41bp 1 0.693850102276077 1 0.967961430549622 experiment 0.612299795447846 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 IMP4 ENSG00000136718 UTR3 Human protein_coding chr2:131104099 chr2:131104117 . . 0 hm6A_associated_SNPs_4692 0 0 1 1 131104106 131104125 mRNA hsa-miR-542-3p IMP4 miRanda miRanda
14034 chr2 131104117 131104117 1 + A G rs116215643 131104103 + 131104083 131104123 41 GATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGTCA GATGGGGCTGTCATAGACAGACCCACCAGTAGGAGCTGTCA < 41bp 1 0.297867730782644 1 0.942500352859497 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 IMP4 ENSG00000136718 UTR3 Human protein_coding chr2:131104103 chr2:131104117 . . 0 hm6A_associated_SNPs_4693 0 0 1 1 131104106 131104125 mRNA hsa-miR-542-3p IMP4 miRanda miRanda
14034 chr2 131905009 131905009 1 + C T rs570527857 131905017 + 131904997 131905037 41 TTGGTAGGCATACTTGGAGAACATATCCCACATTAGGAATT TTGGTAGGCATATTTGGAGAACATATCCCACATTAGGAATT < 41bp 1 0.390832662853632 1 0.00721630454063416 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131905017 chr2:131905009 . . 0 hm6A_associated_SNPs_4707 0 0 1 3 131905004 131905024 mRNA hsa-miR-190 PLEKHB2 miRanda miRanda
14034 chr2 131905009 131905009 1 + C T rs570527857 131905017 + 131904997 131905037 41 TTGGTAGGCATACTTGGAGAACATATCCCACATTAGGAATT TTGGTAGGCATATTTGGAGAACATATCCCACATTAGGAATT < 41bp 1 0.390832662853632 1 0.00721630454063416 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131905017 chr2:131905009 . . 0 hm6A_associated_SNPs_4707 0 0 1 3 131905008 131905030 mRNA hsa-miR-299-3p PLEKHB2 miRanda miRanda
14034 chr2 131905009 131905009 1 + C T rs570527857 131905017 + 131904997 131905037 41 TTGGTAGGCATACTTGGAGAACATATCCCACATTAGGAATT TTGGTAGGCATATTTGGAGAACATATCCCACATTAGGAATT < 41bp 1 0.390832662853632 1 0.00721630454063416 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131905017 chr2:131905009 . . 0 hm6A_associated_SNPs_4707 0 0 1 3 131905004 131905024 mRNA hsa-miR-190b PLEKHB2 miRanda miRanda
14034 chr2 135210561 135210561 1 + C A rs77355111 135210542 + 135210522 135210562 41 CCAAGTTTTTATAGCAAAAGACCAAATTAGCTGTAGAGTCT CCAAGTTTTTATAGCAAAAGACCAAATTAGCTGTAGAGTAT < 41bp 1 0.0729583569495078 1 0.00184041261672974 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 40 MGAT5 ENSG00000152127 UTR3 Human protein_coding chr2:135210542 chr2:135210561 . . 0 hm6A_associated_SNPs_4718 0 0 1 1 135210553 135210574 mRNA hsa-miR-544 LOC151162 miRanda miRanda
14034 chr2 135927343 135927343 1 + G A rs11558414 135927348 + 135927328 135927368 41 AGCCCCCCCGTGTGAGGATGACATCACCACATTTCTAGTTT AGCCCCCCCGTGTGAAGATGACATCACCACATTTCTAGTTT < 41bp 1 0.368205696302997 1 0.0496866703033447 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 RAB3GAP1 ENSG00000115839 UTR3 Human protein_coding chr2:135927348 chr2:135927343 . . 0 hm6A_associated_SNPs_4726 0 0 1 1 135927339 135927360 mRNA hsa-miR-299-3p RAB3GAP1 miRanda miRanda
14034 chr2 135927346 135927346 1 + T C rs116237324 135927348 + 135927328 135927368 41 AGCCCCCCCGTGTGAGGATGACATCACCACATTTCTAGTTT AGCCCCCCCGTGTGAGGACGACATCACCACATTTCTAGTTT Direct Loss 1 0.410011168148456 1 0.0518762767314911 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 RAB3GAP1 ENSG00000115839 UTR3 Human protein_coding chr2:135927348 chr2:135927346 . . 0 hm6A_associated_SNPs_4727 1 0 1 1 135927339 135927360 mRNA hsa-miR-299-3p RAB3GAP1 miRanda miRanda
14034 chr2 139328891 139328891 1 + G T rs13404361 139328874 + 139328854 139328894 41 CTATATTTCTAACCACAGTGACTTCAGTAAAAATACCGTAT CTATATTTCTAACCACAGTGACTTCAGTAAAAATACCTTAT < 41bp 1 0.124340854452683 1 0.0729431509971619 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SPOPL ENSG00000241772 ncRNA_intronic Human 3prime_overlapping_ncRNA chr2:139328874 chr2:139328891 . . 0 hm6A_associated_SNPs_4737 0 0 1 1 139328887 139328908 mRNA hsa-miR-203 SPOPL miRanda miRanda
14034 chr2 139328891 139328891 1 + G T rs13404361 139328900 + 139328880 139328920 41 GTAAAAATACCGTATAATGAACATTTCAGCTTCTTCTTACT GTAAAAATACCTTATAATGAACATTTCAGCTTCTTCTTACT < 41bp 1 0.389540378905474 1 0.135660082101822 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 SPOPL ENSG00000241772 ncRNA_intronic Human 3prime_overlapping_ncRNA chr2:139328900 chr2:139328891 . . 0 hm6A_associated_SNPs_4738 0 0 1 1 139328887 139328908 mRNA hsa-miR-203 SPOPL miRanda miRanda
14034 chr2 149544749 149544749 1 + A T rs576814500 149544767 + 149544747 149544787 41 TAACTGGCTTTAAAACTGTAACACATCACATAAAAGATACT TATCTGGCTTTAAAACTGTAACACATCACATAAAAGATACT < 41bp 1 0.408323076494946 1 0.00925678014755249 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 EPC2 ENSG00000135999 UTR3 Human protein_coding chr2:149544767 chr2:149544749 . . 0 hm6A_associated_SNPs_4748 0 0 1 3 149544747 149544768 mRNA hsa-miR-139-5p EPC2 miRanda miRanda
14034 chr2 149544749 149544749 1 + A T rs576814500 149544767 + 149544747 149544787 41 TAACTGGCTTTAAAACTGTAACACATCACATAAAAGATACT TATCTGGCTTTAAAACTGTAACACATCACATAAAAGATACT < 41bp 1 0.408323076494946 1 0.00925678014755249 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 EPC2 ENSG00000135999 UTR3 Human protein_coding chr2:149544767 chr2:149544749 . . 0 hm6A_associated_SNPs_4748 0 0 1 3 149544737 149544755 mRNA hsa-miR-223 EPC2 miRanda miRanda
14034 chr2 149544749 149544749 1 + A T rs576814500 149544767 + 149544747 149544787 41 TAACTGGCTTTAAAACTGTAACACATCACATAAAAGATACT TATCTGGCTTTAAAACTGTAACACATCACATAAAAGATACT < 41bp 1 0.408323076494946 1 0.00925678014755249 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 EPC2 ENSG00000135999 UTR3 Human protein_coding chr2:149544767 chr2:149544749 . . 0 hm6A_associated_SNPs_4748 0 0 1 3 149544733 149544755 mRNA hsa-miR-145 EPC2 miRanda miRanda
14034 chr2 153504449 153504449 1 + T G rs367975208 153504463 + 153504443 153504483 41 ACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATG ACAGGGGGTGCGTGAATGAAACTGCCCACATGAACTTTATG < 41bp 1 0.693243374727753 1 0.853350162506104 experiment 0.613513250544494 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 FMNL2 ENSG00000157827 UTR3 Human protein_coding chr2:153504463 chr2:153504449 . . 0 hm6A_associated_SNPs_4758 0 0 1 2 153504428 153504450 mRNA hsa-miR-10a FMNL2 miRanda miRanda
14034 chr2 153504449 153504449 1 + T G rs367975208 153504463 + 153504443 153504483 41 ACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATG ACAGGGGGTGCGTGAATGAAACTGCCCACATGAACTTTATG < 41bp 1 0.693243374727753 1 0.853350162506104 experiment 0.613513250544494 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 FMNL2 ENSG00000157827 UTR3 Human protein_coding chr2:153504463 chr2:153504449 . . 0 hm6A_associated_SNPs_4758 0 0 1 2 153504428 153504450 mRNA hsa-miR-10b FMNL2 miRanda miRanda
14034 chr2 153504606 153504606 1 + A G rs60853545 153504592 + 153504572 153504612 41 TCTCCTTTCAACCCTTGTTAACAAGTGCCTAAAAATGGAAG TCTCCTTTCAACCCTTGTTAACAAGTGCCTAAAAGTGGAAG < 41bp 1 0.70689535051939 1 0.708895564079285 experiment 0.586209298961219 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 35 FMNL2 ENSG00000157827 UTR3 Human protein_coding chr2:153504592 chr2:153504606 . . 0 hm6A_associated_SNPs_4759 0 0 1 1 153504603 153504623 mRNA hsa-miR-488 FMNL2 miRanda miRanda
14034 chr2 159537868 159537868 1 + A G rs3142 159537877 + 159537857 159537897 41 TTCCTCGCCTCATTCATAGGACACTTCACTGCCATTTTCTA TTCCTCGCCTCGTTCATAGGACACTTCACTGCCATTTTCTA < 41bp 1 0.6274935955405 1 0.939569294452667 experiment 0.745012808919 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 PKP4-AS1 ENSG00000204380 ncRNA_intronic Human antisense chr2:159537877 chr2:159537868 . . 0 hm6A_associated_SNPs_4771 0 0 0 1 159537868 159537890 mRNA hsa-miR-34c-5p PKP4 miRanda miRanda
14034 chr2 160087535 160087535 1 + T G rs3821301 160087524 + 160087504 160087544 41 TTATAGAGTCAAATGTGTGAACCTTAAGAAATCCCCATTTG TTATAGAGTCAAATGTGTGAACCTTAAGAAAGCCCCATTTG < 41bp 1 0.751325642752556 1 0.969583988189697 experiment 0.497348714494887 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TANC1 ENSG00000115183 UTR3 Human protein_coding chr2:160087524 chr2:160087535 . . 0 hm6A_associated_SNPs_4775 0 0 0 2 160087524 160087538 mRNA hsa-miR-876-5p TANC1 miRanda miRanda
14034 chr2 160087535 160087535 1 + T G rs3821301 160087524 + 160087504 160087544 41 TTATAGAGTCAAATGTGTGAACCTTAAGAAATCCCCATTTG TTATAGAGTCAAATGTGTGAACCTTAAGAAAGCCCCATTTG < 41bp 1 0.751325642752556 1 0.969583988189697 experiment 0.497348714494887 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TANC1 ENSG00000115183 UTR3 Human protein_coding chr2:160087524 chr2:160087535 . . 0 hm6A_associated_SNPs_4775 0 0 0 2 160087518 160087538 mRNA hsa-miR-876-5p TANC1 miRanda miRanda
14034 chr2 160604452 160604452 1 + C T rs11555185 160604432 + 160604412 160604452 41 AATTGCCTTCTGAACATCAGACCATACTAAGTTCTAGGGAC AATTGCCTTCTGAACATCAGACCATACTAAGTTCTAGGGAT < 41bp 1 0.558103135960831 1 0.873962879180908 experiment 0.883793728078338 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604432 chr2:160604452 synonymous SNV . 0 hm6A_associated_SNPs_4777 0 0 1 1 160604445 160604467 mRNA hsa-miR-186 MARCH7 miRanda miRanda
14034 chr2 160604452 160604452 1 + C T rs11555185 160604451 + 160604431 160604471 41 GACCATACTAAGTTCTAGGGACTCCAGAAATTCTTTAAGAT GACCATACTAAGTTCTAGGGATTCCAGAAATTCTTTAAGAT Direct Loss 1 0.73984792796302 1 0.897577226161957 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604451 chr2:160604452 synonymous SNV . 0 hm6A_associated_SNPs_4778 0 0 1 1 160604445 160604467 mRNA hsa-miR-186 MARCH7 miRanda miRanda
14034 chr2 160604605 160604605 1 + A G rs149522969 160604596 + 160604576 160604616 41 AGGGTTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGA AGGGTTGTTTCATCTCAAAGACCATTTCAGGAATCTTCTGA < 41bp 1 0.576010084947548 1 0.939341843128204 experiment 0.847979830104904 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604596 chr2:160604605 synonymous SNV . 0 hm6A_associated_SNPs_4779 0 0 1 2 160604583 160604605 mRNA hsa-miR-203 MARCH7 miRanda miRanda
14034 chr2 160604605 160604605 1 + A G rs149522969 160604596 + 160604576 160604616 41 AGGGTTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGA AGGGTTGTTTCATCTCAAAGACCATTTCAGGAATCTTCTGA < 41bp 1 0.576010084947548 1 0.939341843128204 experiment 0.847979830104904 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604596 chr2:160604605 synonymous SNV . 0 hm6A_associated_SNPs_4779 0 0 1 2 160604604 160604626 mRNA hsa-miR-205 MARCH7 miRanda miRanda
14034 chr2 160624245 160624245 1 + A G rs553672138 160624238 + 160624218 160624258 41 TTGCTAGTGAGAAAAGTGGGACAAAATATACTTTTGAAATA TTGCTAGTGAGAAAAGTGGGACAAAATGTACTTTTGAAATA < 41bp 1 0.770475124877553 1 0.737231850624084 experiment 0.459049750244894 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 MARCH7 ENSG00000136536 UTR3 Human protein_coding chr2:160624238 chr2:160624245 . . 0 hm6A_associated_SNPs_4782 0 0 1 1 160624244 160624264 mRNA hsa-miR-590-3p MARCH7 miRanda miRanda
14034 chr2 160624842 160624842 1 + G A rs75255070 160624828 + 160624808 160624848 41 TACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGA TACCTTTGGAGAACAGATGAACATTATTCACCATAAATGGA < 41bp 1 0.590724518369009 1 0.781281352043152 experiment 0.818550963261982 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 35 MARCH7 ENSG00000136536 UTR3 Human protein_coding chr2:160624828 chr2:160624842 . . 0 hm6A_associated_SNPs_4783 0 0 1 1 160624839 160624859 mRNA hsa-miR-144 MARCH7 miRanda miRanda
14034 chr2 169721496 169721496 1 + A G rs375031439 169721487 + 169721467 169721507 41 CTACAAAGGCATAAAACAAGACTCTGAACATACTACCTTCA CTACAAAGGCATAAAACAAGACTCTGAACGTACTACCTTCA < 41bp 1 0.553834712406843 1 0.812219142913818 experiment 0.892330575186314 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 30 NOSTRIN ENSG00000163072 UTR3 Human protein_coding chr2:169721487 chr2:169721496 . . 0 hm6A_associated_SNPs_4792 0 0 0 3 169721481 169721505 mRNA hsa-miR-196a NOSTRIN miRanda miRanda
14034 chr2 169721496 169721496 1 + A G rs375031439 169721487 + 169721467 169721507 41 CTACAAAGGCATAAAACAAGACTCTGAACATACTACCTTCA CTACAAAGGCATAAAACAAGACTCTGAACGTACTACCTTCA < 41bp 1 0.553834712406843 1 0.812219142913818 experiment 0.892330575186314 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 30 NOSTRIN ENSG00000163072 UTR3 Human protein_coding chr2:169721487 chr2:169721496 . . 0 hm6A_associated_SNPs_4792 0 0 0 3 169721493 169721514 mRNA hsa-miR-122 NOSTRIN miRanda miRanda
14034 chr2 169721496 169721496 1 + A G rs375031439 169721487 + 169721467 169721507 41 CTACAAAGGCATAAAACAAGACTCTGAACATACTACCTTCA CTACAAAGGCATAAAACAAGACTCTGAACGTACTACCTTCA < 41bp 1 0.553834712406843 1 0.812219142913818 experiment 0.892330575186314 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 30 NOSTRIN ENSG00000163072 UTR3 Human protein_coding chr2:169721487 chr2:169721496 . . 0 hm6A_associated_SNPs_4792 0 0 0 3 169721481 169721505 mRNA hsa-miR-196b NOSTRIN miRanda miRanda
14034 chr2 170494067 170494067 1 + G A rs74263912 170494047 + 170494027 170494067 41 CGGATGAGTGAGTTATATAAACTTACTTCCATTCTGTTTCG CGGATGAGTGAGTTATATAAACTTACTTCCATTCTGTTTCA < 41bp 1 0.685308366221523 1 0.964884579181671 experiment 0.629383267556953 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 PPIG ENSG00000138398 UTR3 Human protein_coding chr2:170494047 chr2:170494067 . . 0 hm6A_associated_SNPs_4798 0 0 1 1 170494065 170494083 mRNA hsa-miR-371-5p PPIG miRanda miRanda
14034 chr2 170494067 170494067 1 + G A rs74263912 170494085 + 170494065 170494105 41 TCGGATTTTAAGTTTGAGAGACTTGCTAATGAATCTCCTTT TCAGATTTTAAGTTTGAGAGACTTGCTAATGAATCTCCTTT < 41bp 1 0.508947880287472 1 0.95991051197052 experiment 0.982104239425057 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 3 PPIG ENSG00000138398 UTR3 Human protein_coding chr2:170494085 chr2:170494067 . . 0 hm6A_associated_SNPs_4799 0 0 1 1 170494065 170494083 mRNA hsa-miR-371-5p PPIG miRanda miRanda
14034 chr2 170668549 170668549 1 + T G rs370462850 170668535 + 170668515 170668555 41 ATGAGAATGTATTAGTACAAACTAACTAATAAAATATATAC ATGAGAATGTATTAGTACAAACTAACTAATAAAAGATATAC < 41bp 1 0.121830531030184 1 0.560780346393585 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 35 SSB ENSG00000138382;ENSG00000138385 UTR3 Human other chr2:170668535 chr2:170668549 . . 0 hm6A_associated_SNPs_4810 0 0 1 2 170668540 170668559 mRNA hsa-miR-144 SSB miRanda miRanda
14034 chr2 170668549 170668549 1 + T G rs370462850 170668535 + 170668515 170668555 41 ATGAGAATGTATTAGTACAAACTAACTAATAAAATATATAC ATGAGAATGTATTAGTACAAACTAACTAATAAAAGATATAC < 41bp 1 0.121830531030184 1 0.560780346393585 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 35 SSB ENSG00000138382;ENSG00000138385 UTR3 Human other chr2:170668535 chr2:170668549 . . 0 hm6A_associated_SNPs_4810 0 0 1 2 170668531 170668551 mRNA hsa-miR-590-3p SSB miRanda miRanda
14034 chr2 170865403 170865403 1 + C G rs149011538 170865417 + 170865397 170865437 41 CAAGACCCCGGGCTCACCAGACAATGATTTTCTCTTTATGT CAAGACGCCGGGCTCACCAGACAATGATTTTCTCTTTATGT < 41bp 1 0.740687612223632 1 0.259713232517242 experiment 0.518624775552736 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170865417 chr2:170865403 synonymous SNV . 0 hm6A_associated_SNPs_4812 0 0 1 1 170865381 170865403 mRNA hsa-miR-431 UBR3 miRanda miRanda
14034 chr2 170938564 170938564 1 + T C rs17635525 170938549 + 170938529 170938569 41 TTTTTTTTAATATCTGGAGAACATTAATAACAAGTTAAATT TTTTTTTTAATATCTGGAGAACATTAATAACAAGTCAAATT < 41bp 1 0.370571243578602 1 0.784863948822021 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 36 UBR3 ENSG00000144357 UTR3 Human protein_coding chr2:170938549 chr2:170938564 . . 0 hm6A_associated_SNPs_4814 0 0 1 1 170938556 170938577 mRNA hsa-miR-186 UBR3 miRanda miRanda
14034 chr2 170939757 170939757 1 + C G rs541282861 170939756 + 170939736 170939776 41 TTACAAGAGTATAAAAATGGACATTAAATCATGGCCTTGCA TTACAAGAGTATAAAAATGGAGATTAAATCATGGCCTTGCA Direct Loss 1 0.284621238277216 1 0.413110554218292 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 22 UBR3 ENSG00000144357 UTR3 Human protein_coding chr2:170939756 chr2:170939757 . . 0 hm6A_associated_SNPs_4815 0 0 1 1 170939737 170939758 mRNA hsa-miR-136 UBR3 miRanda miRanda
14034 chr2 171822786 171822786 1 + G A rs566141249 171822773 + 171822753 171822793 41 TAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTG TAAATAATTCCAAGGGGAAAACTAAACGAGGACATGGGTTG < 41bp 1 0.783197607935946 1 0.981724977493286 experiment 0.433604784128109 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 GORASP2 ENSG00000115806 UTR3 Human protein_coding chr2:171822773 chr2:171822786 . . 0 hm6A_associated_SNPs_4818 0 0 1 1 171822786 171822808 mRNA hsa-miR-490-3p GORASP2 miRanda miRanda
14034 chr2 171823068 171823068 1 + C G rs137885402 171823077 + 171823057 171823097 41 AATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATT AATGCAGACCAGCTCACTAAACTGTAAACGGTAAAGAGATT < 41bp 1 0.719416785974984 1 0.871483325958252 experiment 0.561166428050031 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 GORASP2 ENSG00000115806 UTR3 Human protein_coding chr2:171823077 chr2:171823068 . . 0 hm6A_associated_SNPs_4819 0 0 1 1 171823067 171823090 mRNA hsa-miR-451 GORASP2 miRanda miRanda
14034 chr2 171823071 171823071 1 + C T rs566403339 171823077 + 171823057 171823097 41 AATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATT AATGCAGACCACCTTACTAAACTGTAAACGGTAAAGAGATT < 41bp 1 0.714967757313506 1 0.908323287963867 experiment 0.570064485372989 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 GORASP2 ENSG00000115806 UTR3 Human protein_coding chr2:171823077 chr2:171823071 . . 0 hm6A_associated_SNPs_4820 0 0 1 1 171823067 171823090 mRNA hsa-miR-451 GORASP2 miRanda miRanda
14034 chr2 172340399 172340399 1 + G A rs16859404 172340395 + 172340375 172340415 41 ACCAGATTTGTTCGGCATGAACTTGTGCCAAATTTCCTCCA ACCAGATTTGTTCGGCATGAACTTATGCCAAATTTCCTCCA < 41bp 1 0.178584366799015 1 0.00467699766159058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 DCAF17 ENSG00000115827 UTR3 Human protein_coding chr2:172340395 chr2:172340399 . . 0 hm6A_associated_SNPs_4823 0 0 0 2 172340384 172340406 mRNA hsa-miR-96 DCAF17 miRanda miRanda
14034 chr2 172340399 172340399 1 + G A rs16859404 172340395 + 172340375 172340415 41 ACCAGATTTGTTCGGCATGAACTTGTGCCAAATTTCCTCCA ACCAGATTTGTTCGGCATGAACTTATGCCAAATTTCCTCCA < 41bp 1 0.178584366799015 1 0.00467699766159058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 DCAF17 ENSG00000115827 UTR3 Human protein_coding chr2:172340395 chr2:172340399 . . 0 hm6A_associated_SNPs_4823 0 0 0 2 172340384 172340406 mRNA hsa-miR-1271 DCAF17 miRanda miRanda
14034 chr2 172411496 172411496 1 + A G rs6759970 172411500 + 172411480 172411520 41 GTATTGATTGAGGCCTATGAACTGACCTGAATTGGAAAGGA GTATTGATTGAGGCCTGTGAACTGACCTGAATTGGAAAGGA < 41bp 1 0.374449879932729 1 0.150954008102417 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 17 CYBRD1 ENSG00000071967 UTR3 Human protein_coding chr2:172411500 chr2:172411496 . . 0 hm6A_associated_SNPs_4824 0 0 1 1 172411485 172411506 mRNA hsa-miR-223 CYBRD1 miRanda miRanda
14034 chr2 172945550 172945550 1 + T G rs190130720 172945546 + 172945526 172945566 41 ACAGTGATCTTTGTATCTGAACTTTGCACGTCTGCCGAAAA ACAGTGATCTTTGTATCTGAACTTGGCACGTCTGCCGAAAA < 41bp 1 0.722560047129629 1 0.992250204086304 experiment 0.554879905740742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 METAP1D ENSG00000172878 UTR3 Human protein_coding chr2:172945546 chr2:172945550 . . 0 hm6A_associated_SNPs_4831 0 0 0 2 172945530 172945555 mRNA hsa-miR-19a MAP1D miRanda miRanda
14034 chr2 172945550 172945550 1 + T G rs190130720 172945546 + 172945526 172945566 41 ACAGTGATCTTTGTATCTGAACTTTGCACGTCTGCCGAAAA ACAGTGATCTTTGTATCTGAACTTGGCACGTCTGCCGAAAA < 41bp 1 0.722560047129629 1 0.992250204086304 experiment 0.554879905740742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 METAP1D ENSG00000172878 UTR3 Human protein_coding chr2:172945546 chr2:172945550 . . 0 hm6A_associated_SNPs_4831 0 0 0 2 172945530 172945555 mRNA hsa-miR-19b MAP1D miRanda miRanda
14034 chr2 172945582 172945582 1 + C A rs553979497 172945581 + 172945561 172945601 41 CGAAAAATCCGAACCTGTTGACTGGGATTTTTAAGAATCCG CGAAAAATCCGAACCTGTTGAATGGGATTTTTAAGAATCCG Direct Loss 1 0.742732300674615 1 0.990619540214539 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 22 METAP1D ENSG00000172878 UTR3 Human protein_coding chr2:172945581 chr2:172945582 . . 0 hm6A_associated_SNPs_4832 0 0 0 1 172945560 172945582 mRNA hsa-miR-421 MAP1D miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369199 + 173369179 173369219 41 TTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCT TTGGAATGGATTTTTCTTTAACTGCTGTAATTTAACTTTCT < 41bp 1 0.644163245082881 1 0.797364711761475 experiment 0.711673509834238 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369199 chr2:173369204 . . 0 hm6A_associated_SNPs_4839 0 0 1 4 173369184 173369205 mRNA hsa-miR-34a ITGA6 miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369199 + 173369179 173369219 41 TTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCT TTGGAATGGATTTTTCTTTAACTGCTGTAATTTAACTTTCT < 41bp 1 0.644163245082881 1 0.797364711761475 experiment 0.711673509834238 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369199 chr2:173369204 . . 0 hm6A_associated_SNPs_4839 0 0 1 4 173369183 173369205 mRNA hsa-miR-34c-5p ITGA6 miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369199 + 173369179 173369219 41 TTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCT TTGGAATGGATTTTTCTTTAACTGCTGTAATTTAACTTTCT < 41bp 1 0.644163245082881 1 0.797364711761475 experiment 0.711673509834238 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369199 chr2:173369204 . . 0 hm6A_associated_SNPs_4839 0 0 1 4 173369184 173369205 mRNA hsa-miR-449a ITGA6 miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369199 + 173369179 173369219 41 TTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCT TTGGAATGGATTTTTCTTTAACTGCTGTAATTTAACTTTCT < 41bp 1 0.644163245082881 1 0.797364711761475 experiment 0.711673509834238 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369199 chr2:173369204 . . 0 hm6A_associated_SNPs_4839 0 0 1 4 173369184 173369205 mRNA hsa-miR-449b ITGA6 miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369213 + 173369193 173369233 41 TCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATT TCTTTAACTGCTGTAATTTAACTTTCTGGGTTGCCTTTATT < 41bp 1 0.695570496327187 1 0.731494009494781 experiment 0.608859007345625 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369213 chr2:173369204 . . 0 hm6A_associated_SNPs_4840 0 0 1 4 173369184 173369205 mRNA hsa-miR-34a ITGA6 miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369213 + 173369193 173369233 41 TCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATT TCTTTAACTGCTGTAATTTAACTTTCTGGGTTGCCTTTATT < 41bp 1 0.695570496327187 1 0.731494009494781 experiment 0.608859007345625 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369213 chr2:173369204 . . 0 hm6A_associated_SNPs_4840 0 0 1 4 173369183 173369205 mRNA hsa-miR-34c-5p ITGA6 miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369213 + 173369193 173369233 41 TCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATT TCTTTAACTGCTGTAATTTAACTTTCTGGGTTGCCTTTATT < 41bp 1 0.695570496327187 1 0.731494009494781 experiment 0.608859007345625 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369213 chr2:173369204 . . 0 hm6A_associated_SNPs_4840 0 0 1 4 173369184 173369205 mRNA hsa-miR-449a ITGA6 miRanda miRanda
14034 chr2 173369204 173369204 1 + C T rs114499545 173369213 + 173369193 173369233 41 TCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATT TCTTTAACTGCTGTAATTTAACTTTCTGGGTTGCCTTTATT < 41bp 1 0.695570496327187 1 0.731494009494781 experiment 0.608859007345625 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369213 chr2:173369204 . . 0 hm6A_associated_SNPs_4840 0 0 1 4 173369184 173369205 mRNA hsa-miR-449b ITGA6 miRanda miRanda
14034 chr2 173369401 173369401 1 + C T rs538089281 173369414 + 173369394 173369434 41 TAGCTGTCCCACATCACAAGACTATGCCATTGGGGTAGTTG TAGCTGTTCCACATCACAAGACTATGCCATTGGGGTAGTTG < 41bp 1 0.765311316939931 1 0.925835728645325 experiment 0.469377366120137 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369414 chr2:173369401 . . 0 hm6A_associated_SNPs_4843 0 0 1 1 173369387 173369408 mRNA hsa-miR-299-3p ITGA6 miRanda miRanda
14034 chr2 173370968 173370968 1 + A G rs140058200 173370961 + 173370941 173370981 41 GCATTGTATATGTGAAGCAAACTCTAAAATTATAAATGACA GCATTGTATATGTGAAGCAAACTCTAAGATTATAAATGACA < 41bp 1 0.0617711865236407 1 0.77786111831665 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 28 ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173370961 chr2:173370968 . . 0 hm6A_associated_SNPs_4845 0 0 1 1 173370953 173370972 mRNA hsa-miR-590-3p ITGA6 miRanda miRanda
14034 chr2 173431636 173431636 1 + C T rs371229404 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCTGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.220434514978681 1 0.834853172302246 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431636 synonymous SNV . 0 hm6A_associated_SNPs_4846 0 0 1 4 173431630 173431651 mRNA hsa-miR-26a PDK1 miRanda miRanda
14034 chr2 173431636 173431636 1 + C T rs371229404 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCTGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.220434514978681 1 0.834853172302246 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431636 synonymous SNV . 0 hm6A_associated_SNPs_4846 0 0 1 4 173431628 173431651 mRNA hsa-miR-26b PDK1 miRanda miRanda
14034 chr2 173431636 173431636 1 + C T rs371229404 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCTGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.220434514978681 1 0.834853172302246 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431636 synonymous SNV . 0 hm6A_associated_SNPs_4846 0 0 1 4 173431615 173431636 mRNA hsa-miR-185 PDK1 miRanda miRanda
14034 chr2 173431636 173431636 1 + C T rs371229404 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCTGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.220434514978681 1 0.834853172302246 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431636 synonymous SNV . 0 hm6A_associated_SNPs_4846 0 0 1 4 173431635 173431651 mRNA hsa-miR-1297 PDK1 miRanda miRanda
14034 chr2 173463514 173463514 1 + A G rs77515302 173463504 + 173463484 173463524 41 TGTATGGCAATAAACTGAAAACATGGATCAACCCTTCTTTT TGTATGGCAATAAACTGAAAACATGGATCAGCCCTTCTTTT < 41bp 1 0.333685728723857 1 0.735301673412323 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 PDK1 ENSG00000152256 UTR3 Human protein_coding chr2:173463504 chr2:173463514 . . 0 hm6A_associated_SNPs_4847 0 0 1 1 173463499 173463519 mRNA hsa-miR-296-3p PDK1 miRanda miRanda
14034 chr2 174233381 174233381 1 + A T rs572258045 174233379 + 174233359 174233399 41 TTTAGCAGTTTGTTAACCTGACATCTCTGCCAGTCTAGTTT TTTAGCAGTTTGTTAACCTGACTTCTCTGCCAGTCTAGTTT < 41bp 1 0.198266278063416 1 0.293261021375656 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 CDCA7 ENSG00000144354 UTR3 Human protein_coding chr2:174233379 chr2:174233381 . . 0 hm6A_associated_SNPs_4856 0 0 1 1 174233369 174233390 mRNA hsa-miR-31 CDCA7 miRanda miRanda
14034 chr2 176959778 176959778 1 + A G rs542428021 176959782 + 176959762 176959802 41 AATAATCCGCCCCCCAATGAACTTCAGAAGTGCCATTCTGA AATAATCCGCCCCCCAGTGAACTTCAGAAGTGCCATTCTGA < 41bp 1 0.123469088525075 1 0.960519731044769 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 17 HOXD13 ENSG00000128714 UTR3 Human protein_coding chr2:176959782 chr2:176959778 . . 0 hm6A_associated_SNPs_4865 0 0 1 1 176959777 176959798 mRNA hsa-miR-183 HOXD13 miRanda miRanda
14034 chr2 176960065 176960065 1 + T G rs550052701 176960075 + 176960055 176960095 41 GTATCAATATTGAAATGAAGACAATCTTTCCAACTTTGGGT GTATCAATATGGAAATGAAGACAATCTTTCCAACTTTGGGT < 41bp 1 0.143324498490105 1 0.495093911886215 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 HOXD13 ENSG00000128714 UTR3 Human protein_coding chr2:176960075 chr2:176960065 . . 0 hm6A_associated_SNPs_4866 0 0 1 1 176960060 176960081 mRNA hsa-miR-219-5p HOXD13 miRanda miRanda
14034 chr2 178086305 178086305 1 + T C rs149786420 178086325 + 178086305 178086345 41 TATTAGCTTAGCTCTTGTGAACAGTGTGGAAAAGTAAGCCA CATTAGCTTAGCTCTTGTGAACAGTGTGGAAAAGTAAGCCA < 41bp 1 0.47238260183974 1 0.213695555925369 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 1 HNRNPA3 ENSG00000170144 UTR3 Human protein_coding chr2:178086325 chr2:178086305 . . 0 hm6A_associated_SNPs_4880 0 0 0 1 178086301 178086322 mRNA hsa-miR-335 HNRNPA3 miRanda miRanda
14034 chr2 178087779 178087779 1 + T A rs8334 178087770 + 178087750 178087790 41 TGCTGCCCCAAAAGGGCTTAACAATTTAGTCGGATAGTTTA TGCTGCCCCAAAAGGGCTTAACAATTTAGACGGATAGTTTA < 41bp 1 0.202762032743562 1 0.651200234889984 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 HNRNPA3 ENSG00000170144 UTR3 Human protein_coding chr2:178087770 chr2:178087779 . . 0 hm6A_associated_SNPs_4886 0 0 1 5 178087772 178087792 mRNA hsa-miR-30a HNRNPA3 miRanda miRanda
14034 chr2 178087779 178087779 1 + T A rs8334 178087770 + 178087750 178087790 41 TGCTGCCCCAAAAGGGCTTAACAATTTAGTCGGATAGTTTA TGCTGCCCCAAAAGGGCTTAACAATTTAGACGGATAGTTTA < 41bp 1 0.202762032743562 1 0.651200234889984 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 HNRNPA3 ENSG00000170144 UTR3 Human protein_coding chr2:178087770 chr2:178087779 . . 0 hm6A_associated_SNPs_4886 0 0 1 5 178087769 178087792 mRNA hsa-miR-30c HNRNPA3 miRanda miRanda
14034 chr2 178087779 178087779 1 + T A rs8334 178087770 + 178087750 178087790 41 TGCTGCCCCAAAAGGGCTTAACAATTTAGTCGGATAGTTTA TGCTGCCCCAAAAGGGCTTAACAATTTAGACGGATAGTTTA < 41bp 1 0.202762032743562 1 0.651200234889984 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 HNRNPA3 ENSG00000170144 UTR3 Human protein_coding chr2:178087770 chr2:178087779 . . 0 hm6A_associated_SNPs_4886 0 0 1 5 178087772 178087792 mRNA hsa-miR-30d HNRNPA3 miRanda miRanda
14034 chr2 178087779 178087779 1 + T A rs8334 178087770 + 178087750 178087790 41 TGCTGCCCCAAAAGGGCTTAACAATTTAGTCGGATAGTTTA TGCTGCCCCAAAAGGGCTTAACAATTTAGACGGATAGTTTA < 41bp 1 0.202762032743562 1 0.651200234889984 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 HNRNPA3 ENSG00000170144 UTR3 Human protein_coding chr2:178087770 chr2:178087779 . . 0 hm6A_associated_SNPs_4886 0 0 1 5 178087770 178087792 mRNA hsa-miR-30b HNRNPA3 miRanda miRanda
14034 chr2 178087779 178087779 1 + T A rs8334 178087770 + 178087750 178087790 41 TGCTGCCCCAAAAGGGCTTAACAATTTAGTCGGATAGTTTA TGCTGCCCCAAAAGGGCTTAACAATTTAGACGGATAGTTTA < 41bp 1 0.202762032743562 1 0.651200234889984 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 HNRNPA3 ENSG00000170144 UTR3 Human protein_coding chr2:178087770 chr2:178087779 . . 0 hm6A_associated_SNPs_4886 0 0 1 5 178087772 178087792 mRNA hsa-miR-30e HNRNPA3 miRanda miRanda
14034 chr2 178406185 178406185 1 + C A rs115216884 178406165 + 178406145 178406185 41 ATGGGGCTGGGTTTGGTTGAACTTCCATTCTGTATAAATGC ATGGGGCTGGGTTTGGTTGAACTTCCATTCTGTATAAATGA < 41bp 1 0.0447279190800182 1 0.203089654445648 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406165 chr2:178406185 . . 0 hm6A_associated_SNPs_4892 1 0 1 1 178406169 178406191 mRNA hsa-miR-544 AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406293 + 178406273 178406313 41 ATATCTTAAAAAACACTCAGACAGGAGTTAAGGACAGCTTT ATATCTTAAAAAACACTCAGACAGGAGTTAAAGACAGCTTT < 41bp 1 0.131362258322247 1 0.315859854221344 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406293 chr2:178406304 . . 0 hm6A_associated_SNPs_4893 1 0 1 4 178406293 178406314 mRNA hsa-miR-320a AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406293 + 178406273 178406313 41 ATATCTTAAAAAACACTCAGACAGGAGTTAAGGACAGCTTT ATATCTTAAAAAACACTCAGACAGGAGTTAAAGACAGCTTT < 41bp 1 0.131362258322247 1 0.315859854221344 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406293 chr2:178406304 . . 0 hm6A_associated_SNPs_4893 1 0 1 4 178406293 178406314 mRNA hsa-miR-320b AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406293 + 178406273 178406313 41 ATATCTTAAAAAACACTCAGACAGGAGTTAAGGACAGCTTT ATATCTTAAAAAACACTCAGACAGGAGTTAAAGACAGCTTT < 41bp 1 0.131362258322247 1 0.315859854221344 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406293 chr2:178406304 . . 0 hm6A_associated_SNPs_4893 1 0 1 4 178406295 178406314 mRNA hsa-miR-320c AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406293 + 178406273 178406313 41 ATATCTTAAAAAACACTCAGACAGGAGTTAAGGACAGCTTT ATATCTTAAAAAACACTCAGACAGGAGTTAAAGACAGCTTT < 41bp 1 0.131362258322247 1 0.315859854221344 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406293 chr2:178406304 . . 0 hm6A_associated_SNPs_4893 1 0 1 4 178406296 178406314 mRNA hsa-miR-320d AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406306 + 178406286 178406326 41 CACTCAGACAGGAGTTAAGGACAGCTTTAATAATTTTTTTG CACTCAGACAGGAGTTAAAGACAGCTTTAATAATTTTTTTG < 41bp 1 0.172767901969166 1 0.106629133224487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 19 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406306 chr2:178406304 . . 0 hm6A_associated_SNPs_4894 1 0 1 4 178406293 178406314 mRNA hsa-miR-320a AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406306 + 178406286 178406326 41 CACTCAGACAGGAGTTAAGGACAGCTTTAATAATTTTTTTG CACTCAGACAGGAGTTAAAGACAGCTTTAATAATTTTTTTG < 41bp 1 0.172767901969166 1 0.106629133224487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 19 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406306 chr2:178406304 . . 0 hm6A_associated_SNPs_4894 1 0 1 4 178406293 178406314 mRNA hsa-miR-320b AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406306 + 178406286 178406326 41 CACTCAGACAGGAGTTAAGGACAGCTTTAATAATTTTTTTG CACTCAGACAGGAGTTAAAGACAGCTTTAATAATTTTTTTG < 41bp 1 0.172767901969166 1 0.106629133224487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 19 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406306 chr2:178406304 . . 0 hm6A_associated_SNPs_4894 1 0 1 4 178406295 178406314 mRNA hsa-miR-320c AGPS miRanda miRanda
14034 chr2 178406304 178406304 1 + G A rs190466352 178406306 + 178406286 178406326 41 CACTCAGACAGGAGTTAAGGACAGCTTTAATAATTTTTTTG CACTCAGACAGGAGTTAAAGACAGCTTTAATAATTTTTTTG < 41bp 1 0.172767901969166 1 0.106629133224487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 19 AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178406306 chr2:178406304 . . 0 hm6A_associated_SNPs_4894 1 0 1 4 178406296 178406314 mRNA hsa-miR-320d AGPS miRanda miRanda
14034 chr2 179369404 179369404 1 + A C rs559433428 179369402 + 179369382 179369422 41 CACTTACACTAGAGAAATAAACAACTTTCAATGGAAGAGAA CACTTACACTAGAGAAATAAACCACTTTCAATGGAAGAGAA < 41bp 1 0.0840219722766705 1 0.562859773635864 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 MIR548N ENSG00000116095 UTR3 Human protein_coding chr2:179369402 chr2:179369404 . . 0 hm6A_associated_SNPs_4898 0 0 0 2 179369388 179369409 mRNA hsa-miR-382 PLEKHA3 miRanda miRanda
14034 chr2 179369404 179369404 1 + A C rs559433428 179369402 + 179369382 179369422 41 CACTTACACTAGAGAAATAAACAACTTTCAATGGAAGAGAA CACTTACACTAGAGAAATAAACCACTTTCAATGGAAGAGAA < 41bp 1 0.0840219722766705 1 0.562859773635864 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 MIR548N ENSG00000116095 UTR3 Human protein_coding chr2:179369402 chr2:179369404 . . 0 hm6A_associated_SNPs_4898 0 0 0 2 179369388 179369412 mRNA hsa-miR-488 PLEKHA3 miRanda miRanda
14034 chr2 182794444 182794444 1 + G A rs530366965 182794454 + 182794434 182794474 41 TTAAAAAGACGTACATAGAAACTTAGGCACTTTGCTATTTC TTAAAAAGACATACATAGAAACTTAGGCACTTTGCTATTTC < 41bp 1 0.325208762049845 1 0.547536730766296 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182794454 chr2:182794444 . . 0 hm6A_associated_SNPs_4910 0 0 1 1 182794440 182794467 mRNA hsa-miR-93 SSFA2 miRanda miRanda
14034 chr2 182794594 182794594 1 + T C rs559092692 182794581 + 182794561 182794601 41 ATTAATTTTAAAACTTGAAGACTTCCAGACTTATCCAACTT ATTAATTTTAAAACTTGAAGACTTCCAGACTTACCCAACTT < 41bp 1 0.454779025852176 1 0.73923534154892 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182794581 chr2:182794594 . . 0 hm6A_associated_SNPs_4911 0 0 1 2 182794581 182794602 mRNA hsa-miR-382 SSFA2 miRanda miRanda
14034 chr2 182794594 182794594 1 + T C rs559092692 182794581 + 182794561 182794601 41 ATTAATTTTAAAACTTGAAGACTTCCAGACTTATCCAACTT ATTAATTTTAAAACTTGAAGACTTCCAGACTTACCCAACTT < 41bp 1 0.454779025852176 1 0.73923534154892 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182794581 chr2:182794594 . . 0 hm6A_associated_SNPs_4911 0 0 1 2 182794592 182794616 mRNA hsa-miR-190b SSFA2 miRanda miRanda
14034 chr2 182794594 182794594 1 + T C rs559092692 182794589 + 182794569 182794609 41 TAAAACTTGAAGACTTCCAGACTTATCCAACTTATAAATAA TAAAACTTGAAGACTTCCAGACTTACCCAACTTATAAATAA < 41bp 1 0.509936080061159 1 0.725158512592316 experiment 0.980127839877682 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 26 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182794589 chr2:182794594 . . 0 hm6A_associated_SNPs_4912 0 0 1 2 182794581 182794602 mRNA hsa-miR-382 SSFA2 miRanda miRanda
14034 chr2 182794594 182794594 1 + T C rs559092692 182794589 + 182794569 182794609 41 TAAAACTTGAAGACTTCCAGACTTATCCAACTTATAAATAA TAAAACTTGAAGACTTCCAGACTTACCCAACTTATAAATAA < 41bp 1 0.509936080061159 1 0.725158512592316 experiment 0.980127839877682 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 26 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182794589 chr2:182794594 . . 0 hm6A_associated_SNPs_4912 0 0 1 2 182794592 182794616 mRNA hsa-miR-190b SSFA2 miRanda miRanda
14034 chr2 182794594 182794594 1 + T C rs559092692 182794609 + 182794589 182794629 41 ACTTATCCAACTTATAAATAACATATTTCTTCAGACTAACA ACTTACCCAACTTATAAATAACATATTTCTTCAGACTAACA < 41bp 1 0.536933105222248 1 0.710175216197968 experiment 0.926133789555503 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182794609 chr2:182794594 . . 0 hm6A_associated_SNPs_4913 0 0 1 2 182794581 182794602 mRNA hsa-miR-382 SSFA2 miRanda miRanda
14034 chr2 182794594 182794594 1 + T C rs559092692 182794609 + 182794589 182794629 41 ACTTATCCAACTTATAAATAACATATTTCTTCAGACTAACA ACTTACCCAACTTATAAATAACATATTTCTTCAGACTAACA < 41bp 1 0.536933105222248 1 0.710175216197968 experiment 0.926133789555503 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182794609 chr2:182794594 . . 0 hm6A_associated_SNPs_4913 0 0 1 2 182794592 182794616 mRNA hsa-miR-190b SSFA2 miRanda miRanda
14034 chr2 182795429 182795429 1 + T C rs372090461 182795440 + 182795420 182795460 41 TAAAATATATATATATTAAAACAATAAAGTATTTATTTTGC TAAAATATACATATATTAAAACAATAAAGTATTTATTTTGC < 41bp 1 0.106187009928129 1 0.0199773013591766 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 10 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182795440 chr2:182795429 . . 0 hm6A_associated_SNPs_4914 0 0 1 1 182795424 182795446 mRNA hsa-miR-137 SSFA2 miRanda miRanda
14034 chr2 182795448 182795448 1 + G T rs188440272 182795440 + 182795420 182795460 41 TAAAATATATATATATTAAAACAATAAAGTATTTATTTTGC TAAAATATATATATATTAAAACAATAAATTATTTATTTTGC < 41bp 1 0.0970395312796769 1 0.0127395391464233 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 29 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182795440 chr2:182795448 . . 0 hm6A_associated_SNPs_4915 0 0 1 4 182795442 182795462 mRNA hsa-miR-31 SSFA2 miRanda miRanda
14034 chr2 182795448 182795448 1 + G T rs188440272 182795440 + 182795420 182795460 41 TAAAATATATATATATTAAAACAATAAAGTATTTATTTTGC TAAAATATATATATATTAAAACAATAAATTATTTATTTTGC < 41bp 1 0.0970395312796769 1 0.0127395391464233 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 29 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182795440 chr2:182795448 . . 0 hm6A_associated_SNPs_4915 0 0 1 4 182795432 182795453 mRNA hsa-miR-200b SSFA2 miRanda miRanda
14034 chr2 182795448 182795448 1 + G T rs188440272 182795440 + 182795420 182795460 41 TAAAATATATATATATTAAAACAATAAAGTATTTATTTTGC TAAAATATATATATATTAAAACAATAAATTATTTATTTTGC < 41bp 1 0.0970395312796769 1 0.0127395391464233 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 29 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182795440 chr2:182795448 . . 0 hm6A_associated_SNPs_4915 0 0 1 4 182795431 182795453 mRNA hsa-miR-200c SSFA2 miRanda miRanda
14034 chr2 182795448 182795448 1 + G T rs188440272 182795440 + 182795420 182795460 41 TAAAATATATATATATTAAAACAATAAAGTATTTATTTTGC TAAAATATATATATATTAAAACAATAAATTATTTATTTTGC < 41bp 1 0.0970395312796769 1 0.0127395391464233 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 29 SSFA2 ENSG00000138434 UTR3 Human protein_coding chr2:182795440 chr2:182795448 . . 0 hm6A_associated_SNPs_4915 0 0 1 4 182795432 182795453 mRNA hsa-miR-429 SSFA2 miRanda miRanda
14034 chr2 183641949 183641949 1 + A G rs554802404 183641957 + 183641937 183641977 41 TTTATGATGGGAATGAATGAACATTATCTTAGACTTGCAGT TTTATGATGGGAGTGAATGAACATTATCTTAGACTTGCAGT < 41bp 1 0.701371045709263 1 0.860776543617249 experiment 0.597257908581473 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 13 DNAJC10 ENSG00000077232 UTR3 Human protein_coding chr2:183641957 chr2:183641949 . . 0 hm6A_associated_SNPs_4916 0 0 1 1 183641944 183641965 mRNA hsa-miR-190 DNAJC10 miRanda miRanda
14034 chr2 183641949 183641949 1 + A G rs554802404 183641969 + 183641949 183641989 41 ATGAATGAACATTATCTTAGACTTGCAGTTGTACTGCCAGA GTGAATGAACATTATCTTAGACTTGCAGTTGTACTGCCAGA < 41bp 1 0.510799740293134 1 0.693491637706757 experiment 0.978400519413731 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 1 DNAJC10 ENSG00000077232 UTR3 Human protein_coding chr2:183641969 chr2:183641949 . . 0 hm6A_associated_SNPs_4917 0 0 1 1 183641944 183641965 mRNA hsa-miR-190 DNAJC10 miRanda miRanda
14034 chr2 183960477 183960477 1 + C T rs35941903 183960467 + 183960447 183960487 41 TTCCCTTTTTTGGAGAGTAGACTAGCAAAACTCCCTTTTTT TTCCCTTTTTTGGAGAGTAGACTAGCAAAATTCCCTTTTTT < 41bp 1 0.0934408019702416 1 0.87516713142395 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 31 DUSP19 ENSG00000224643 ncRNA_intronic Human antisense chr2:183960467 chr2:183960477 . . 0 hm6A_associated_SNPs_4921 0 0 1 1 183960476 183960496 mRNA hsa-miR-31 DUSP19 miRanda miRanda
14034 chr2 187373912 187373912 1 + C T rs187360153 187373911 + 187373891 187373931 41 CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGTA CACTGTACTTCATAAAGGAAATTGCGTATGCAGATTCAGTA Direct Loss 1 0.241208616050319 1 0.833111226558685 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373911 chr2:187373912 . . 0 hm6A_associated_SNPs_4925 0 0 1 3 187373911 187373934 mRNA hsa-miR-200b ZC3H15 miRanda miRanda
14034 chr2 187373912 187373912 1 + C T rs187360153 187373911 + 187373891 187373931 41 CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGTA CACTGTACTTCATAAAGGAAATTGCGTATGCAGATTCAGTA Direct Loss 1 0.241208616050319 1 0.833111226558685 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373911 chr2:187373912 . . 0 hm6A_associated_SNPs_4925 0 0 1 3 187373912 187373934 mRNA hsa-miR-200c ZC3H15 miRanda miRanda
14034 chr2 187373912 187373912 1 + C T rs187360153 187373911 + 187373891 187373931 41 CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGTA CACTGTACTTCATAAAGGAAATTGCGTATGCAGATTCAGTA Direct Loss 1 0.241208616050319 1 0.833111226558685 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373911 chr2:187373912 . . 0 hm6A_associated_SNPs_4925 0 0 1 3 187373910 187373934 mRNA hsa-miR-429 ZC3H15 miRanda miRanda
14034 chr2 187373930 187373930 1 + T C rs145698165 187373911 + 187373891 187373931 41 CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGTA CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGCA < 41bp 1 0.24017073311232 1 0.892637491226196 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373911 chr2:187373930 . . 0 hm6A_associated_SNPs_4926 0 0 1 3 187373911 187373934 mRNA hsa-miR-200b ZC3H15 miRanda miRanda
14034 chr2 187373930 187373930 1 + T C rs145698165 187373911 + 187373891 187373931 41 CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGTA CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGCA < 41bp 1 0.24017073311232 1 0.892637491226196 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373911 chr2:187373930 . . 0 hm6A_associated_SNPs_4926 0 0 1 3 187373912 187373934 mRNA hsa-miR-200c ZC3H15 miRanda miRanda
14034 chr2 187373930 187373930 1 + T C rs145698165 187373911 + 187373891 187373931 41 CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGTA CACTGTACTTCATAAAGGAAACTGCGTATGCAGATTCAGCA < 41bp 1 0.24017073311232 1 0.892637491226196 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373911 chr2:187373930 . . 0 hm6A_associated_SNPs_4926 0 0 1 3 187373910 187373934 mRNA hsa-miR-429 ZC3H15 miRanda miRanda
14034 chr2 187373930 187373930 1 + T C rs145698165 187373946 + 187373926 187373966 41 TCAGTATTGTGTATCTTTGGACAATTAGATGGACATTTAAA TCAGCATTGTGTATCTTTGGACAATTAGATGGACATTTAAA < 41bp 1 0.722629436364371 1 0.937258958816528 experiment 0.554741127271259 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 5 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373946 chr2:187373930 . . 0 hm6A_associated_SNPs_4927 0 0 1 3 187373911 187373934 mRNA hsa-miR-200b ZC3H15 miRanda miRanda
14034 chr2 187373930 187373930 1 + T C rs145698165 187373946 + 187373926 187373966 41 TCAGTATTGTGTATCTTTGGACAATTAGATGGACATTTAAA TCAGCATTGTGTATCTTTGGACAATTAGATGGACATTTAAA < 41bp 1 0.722629436364371 1 0.937258958816528 experiment 0.554741127271259 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 5 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373946 chr2:187373930 . . 0 hm6A_associated_SNPs_4927 0 0 1 3 187373912 187373934 mRNA hsa-miR-200c ZC3H15 miRanda miRanda
14034 chr2 187373930 187373930 1 + T C rs145698165 187373946 + 187373926 187373966 41 TCAGTATTGTGTATCTTTGGACAATTAGATGGACATTTAAA TCAGCATTGTGTATCTTTGGACAATTAGATGGACATTTAAA < 41bp 1 0.722629436364371 1 0.937258958816528 experiment 0.554741127271259 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 5 ZC3H15 ENSG00000065548 UTR3 Human protein_coding chr2:187373946 chr2:187373930 . . 0 hm6A_associated_SNPs_4927 0 0 1 3 187373910 187373934 mRNA hsa-miR-429 ZC3H15 miRanda miRanda
14034 chr2 187628334 187628334 1 + T G rs181382415 187628342 + 187628322 187628362 41 TTTTTACAAATCTGAAAAAAACAATCTATGACTTTGGTTTA TTTTTACAAATCGGAAAAAAACAATCTATGACTTTGGTTTA < 41bp 1 0.0760725298381912 1 0.865022420883179 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 FAM171B ENSG00000144369 UTR3 Human protein_coding chr2:187628342 chr2:187628334 . . 0 hm6A_associated_SNPs_4940 0 0 1 2 187628333 187628353 mRNA hsa-miR-376a FAM171B miRanda miRanda
14034 chr2 187628334 187628334 1 + T G rs181382415 187628342 + 187628322 187628362 41 TTTTTACAAATCTGAAAAAAACAATCTATGACTTTGGTTTA TTTTTACAAATCGGAAAAAAACAATCTATGACTTTGGTTTA < 41bp 1 0.0760725298381912 1 0.865022420883179 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 FAM171B ENSG00000144369 UTR3 Human protein_coding chr2:187628342 chr2:187628334 . . 0 hm6A_associated_SNPs_4940 0 0 1 2 187628332 187628353 mRNA hsa-miR-376b FAM171B miRanda miRanda
14034 chr2 190340239 190340239 1 + T C rs116332901 190340256 + 190340236 190340276 41 AAATAAGATAATAAATATTAACAAACTTTGCTTTTTTAAAA AAACAAGATAATAAATATTAACAAACTTTGCTTTTTTAAAA < 41bp 1 0.115518188428997 1 0.63360732793808 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 WDR75 ENSG00000115368 UTR3 Human protein_coding chr2:190340256 chr2:190340239 . . 0 hm6A_associated_SNPs_4942 0 0 1 1 190340224 190340245 mRNA hsa-miR-590-5p WDR75 miRanda miRanda
14034 chr2 190719298 190719298 1 + A G rs534500725 190719278 + 190719258 190719298 41 TTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGA TTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGG < 41bp 1 0.72718282598931 1 0.969814419746399 experiment 0.54563434802138 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190719278 chr2:190719298 nonsynonymous SNV 0.173 1 hm6A_associated_SNPs_4946 0 0 0 2 190719298 190719319 mRNA hsa-miR-203 PMS1 miRanda miRanda
14034 chr2 190719298 190719298 1 + A G rs534500725 190719278 + 190719258 190719298 41 TTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGA TTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGG < 41bp 1 0.72718282598931 1 0.969814419746399 experiment 0.54563434802138 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190719278 chr2:190719298 nonsynonymous SNV 0.173 1 hm6A_associated_SNPs_4946 0 0 0 2 190719288 190719309 mRNA hsa-miR-203 PMS1 miRanda miRanda
14034 chr2 190719298 190719298 1 + A G rs534500725 190719311 + 190719291 190719331 41 CACTAAGAATGCATTTCAGGACATTTCAATGAGTAATGTAT CACTAAGGATGCATTTCAGGACATTTCAATGAGTAATGTAT < 41bp 1 0.728307707120825 1 0.912278652191162 experiment 0.54338458575835 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190719311 chr2:190719298 nonsynonymous SNV 0.173 1 hm6A_associated_SNPs_4947 0 0 0 2 190719298 190719319 mRNA hsa-miR-203 PMS1 miRanda miRanda
14034 chr2 190719298 190719298 1 + A G rs534500725 190719311 + 190719291 190719331 41 CACTAAGAATGCATTTCAGGACATTTCAATGAGTAATGTAT CACTAAGGATGCATTTCAGGACATTTCAATGAGTAATGTAT < 41bp 1 0.728307707120825 1 0.912278652191162 experiment 0.54338458575835 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190719311 chr2:190719298 nonsynonymous SNV 0.173 1 hm6A_associated_SNPs_4947 0 0 0 2 190719288 190719309 mRNA hsa-miR-203 PMS1 miRanda miRanda
14034 chr2 191827908 191827908 1 + C T rs16833113 191827896 + 191827876 191827916 41 TGGGAAAAAATAGAAATAAAACAATCTCCCTCCATAATGTG TGGGAAAAAATAGAAATAAAACAATCTCCCTCTATAATGTG < 41bp 1 0.517501518037076 1 0.540810585021973 experiment 0.964996963925848 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 GLS ENSG00000115419 UTR3 Human protein_coding chr2:191827896 chr2:191827908 . . 0 hm6A_associated_SNPs_4955 0 0 1 4 191827897 191827918 mRNA hsa-miR-23a GLS miRanda miRanda
14034 chr2 191827908 191827908 1 + C T rs16833113 191827896 + 191827876 191827916 41 TGGGAAAAAATAGAAATAAAACAATCTCCCTCCATAATGTG TGGGAAAAAATAGAAATAAAACAATCTCCCTCTATAATGTG < 41bp 1 0.517501518037076 1 0.540810585021973 experiment 0.964996963925848 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 GLS ENSG00000115419 UTR3 Human protein_coding chr2:191827896 chr2:191827908 . . 0 hm6A_associated_SNPs_4955 0 0 1 4 191827897 191827918 mRNA hsa-miR-23b GLS miRanda miRanda
14034 chr2 191827908 191827908 1 + C T rs16833113 191827896 + 191827876 191827916 41 TGGGAAAAAATAGAAATAAAACAATCTCCCTCCATAATGTG TGGGAAAAAATAGAAATAAAACAATCTCCCTCTATAATGTG < 41bp 1 0.517501518037076 1 0.540810585021973 experiment 0.964996963925848 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 GLS ENSG00000115419 UTR3 Human protein_coding chr2:191827896 chr2:191827908 . . 0 hm6A_associated_SNPs_4955 0 0 1 4 191827903 191827924 mRNA hsa-miR-137 GLS miRanda miRanda
14034 chr2 191827908 191827908 1 + C T rs16833113 191827896 + 191827876 191827916 41 TGGGAAAAAATAGAAATAAAACAATCTCCCTCCATAATGTG TGGGAAAAAATAGAAATAAAACAATCTCCCTCTATAATGTG < 41bp 1 0.517501518037076 1 0.540810585021973 experiment 0.964996963925848 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 GLS ENSG00000115419 UTR3 Human protein_coding chr2:191827896 chr2:191827908 . . 0 hm6A_associated_SNPs_4955 0 0 1 4 191827897 191827919 mRNA hsa-miR-342-3p GLS miRanda miRanda
14034 chr2 191828392 191828392 1 + C T rs558439962 191828404 + 191828384 191828424 41 AGTCCAGCCTCTCTTCTCAGACATTTAGCTATCTGCCTCTT AGTCCAGCTTCTCTTCTCAGACATTTAGCTATCTGCCTCTT < 41bp 1 0.220390027668216 1 0.0432637929916382 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 GLS ENSG00000115419 UTR3 Human protein_coding chr2:191828404 chr2:191828392 . . 0 hm6A_associated_SNPs_4956 0 0 1 1 191828375 191828395 mRNA hsa-miR-485-5p GLS miRanda miRanda
14034 chr2 192288909 192288909 1 + A G rs146399276 192288900 + 192288880 192288920 41 GAGCAGGATTGTAGAAACTAACAGTGTCTATTTTCATGTCT GAGCAGGATTGTAGAAACTAACAGTGTCTGTTTTCATGTCT < 41bp 1 0.416834539528155 1 0.00481069087982178 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 30 MYO1B ENSG00000128641 UTR3 Human protein_coding chr2:192288900 chr2:192288909 . . 0 hm6A_associated_SNPs_4959 0 0 1 1 192288907 192288930 mRNA hsa-miR-494 MYO1B miRanda miRanda
14034 chr2 196601182 196601182 1 + G A rs551719785 196601194 + 196601174 196601214 41 CAACCAGTGTAGCTGCTGTAACAATCTATCTTATTGTTCAA CAACCAGTATAGCTGCTGTAACAATCTATCTTATTGTTCAA < 41bp 1 0.215595348892478 1 0.00993847846984863 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196601194 chr2:196601182 . . 0 hm6A_associated_SNPs_4964 0 0 1 2 196601171 196601191 mRNA hsa-miR-15b SLC39A10 miRanda miRanda
14034 chr2 196601182 196601182 1 + G A rs551719785 196601194 + 196601174 196601214 41 CAACCAGTGTAGCTGCTGTAACAATCTATCTTATTGTTCAA CAACCAGTATAGCTGCTGTAACAATCTATCTTATTGTTCAA < 41bp 1 0.215595348892478 1 0.00993847846984863 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196601194 chr2:196601182 . . 0 hm6A_associated_SNPs_4964 0 0 1 2 196601172 196601191 mRNA hsa-miR-497 SLC39A10 miRanda miRanda
14034 chr2 196602205 196602205 1 + C T rs531875101 196602204 + 196602184 196602224 41 TTTTTTCCATTAACAAACAAACAAGTCAGTGGCTTAAATGT TTTTTTCCATTAACAAACAAATAAGTCAGTGGCTTAAATGT Direct Loss 1 0.468832289065664 1 0.00150805711746216 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196602204 chr2:196602205 . . 0 hm6A_associated_SNPs_4966 0 0 1 2 196602204 196602227 mRNA hsa-miR-23a SLC39A10 miRanda miRanda
14034 chr2 196602205 196602205 1 + C T rs531875101 196602204 + 196602184 196602224 41 TTTTTTCCATTAACAAACAAACAAGTCAGTGGCTTAAATGT TTTTTTCCATTAACAAACAAATAAGTCAGTGGCTTAAATGT Direct Loss 1 0.468832289065664 1 0.00150805711746216 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196602204 chr2:196602205 . . 0 hm6A_associated_SNPs_4966 0 0 1 2 196602204 196602227 mRNA hsa-miR-23b SLC39A10 miRanda miRanda
14034 chr2 196602206 196602206 1 + A C rs552059177 196602204 + 196602184 196602224 41 TTTTTTCCATTAACAAACAAACAAGTCAGTGGCTTAAATGT TTTTTTCCATTAACAAACAAACCAGTCAGTGGCTTAAATGT < 41bp 1 0.12473453195229 1 0.00175908207893372 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196602204 chr2:196602206 . . 0 hm6A_associated_SNPs_4967 0 0 1 2 196602204 196602227 mRNA hsa-miR-23a SLC39A10 miRanda miRanda
14034 chr2 196602206 196602206 1 + A C rs552059177 196602204 + 196602184 196602224 41 TTTTTTCCATTAACAAACAAACAAGTCAGTGGCTTAAATGT TTTTTTCCATTAACAAACAAACCAGTCAGTGGCTTAAATGT < 41bp 1 0.12473453195229 1 0.00175908207893372 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 SLC39A10 ENSG00000196950 UTR3 Human protein_coding chr2:196602204 chr2:196602206 . . 0 hm6A_associated_SNPs_4967 0 0 1 2 196602204 196602227 mRNA hsa-miR-23b SLC39A10 miRanda miRanda
14034 chr2 197521851 197521851 1 + G A rs146046280 197521855 + 197521835 197521875 41 CTCTGAAGATTGCCTCGCAGACAAAGGTTTGAGTCTAAGAG CTCTGAAGATTGCCTCACAGACAAAGGTTTGAGTCTAAGAG < 41bp 1 0.249525187557579 1 0.975109457969666 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 17 CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197521855 chr2:197521851 synonymous SNV . 0 hm6A_associated_SNPs_4969 0 0 1 1 197521835 197521857 mRNA hsa-miR-346 CCDC150 miRanda miRanda
14034 chr2 197597443 197597443 1 + T C rs6744752 197597436 + 197597416 197597456 41 CTGAGTTTATCACTTTATGAACTCTTATATCAGTACAAAAC CTGAGTTTATCACTTTATGAACTCTTACATCAGTACAAAAC < 41bp 1 0.22687577160775 1 0.925727427005768 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 CCDC150 ENSG00000144395 UTR3 Human protein_coding chr2:197597436 chr2:197597443 . . 0 hm6A_associated_SNPs_4971 0 0 0 3 197597441 197597462 mRNA hsa-miR-196a CCDC150 miRanda miRanda
14034 chr2 197597443 197597443 1 + T C rs6744752 197597436 + 197597416 197597456 41 CTGAGTTTATCACTTTATGAACTCTTATATCAGTACAAAAC CTGAGTTTATCACTTTATGAACTCTTACATCAGTACAAAAC < 41bp 1 0.22687577160775 1 0.925727427005768 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 CCDC150 ENSG00000144395 UTR3 Human protein_coding chr2:197597436 chr2:197597443 . . 0 hm6A_associated_SNPs_4971 0 0 0 3 197597441 197597462 mRNA hsa-miR-196b CCDC150 miRanda miRanda
14034 chr2 197597443 197597443 1 + T C rs6744752 197597436 + 197597416 197597456 41 CTGAGTTTATCACTTTATGAACTCTTATATCAGTACAAAAC CTGAGTTTATCACTTTATGAACTCTTACATCAGTACAAAAC < 41bp 1 0.22687577160775 1 0.925727427005768 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 CCDC150 ENSG00000144395 UTR3 Human protein_coding chr2:197597436 chr2:197597443 . . 0 hm6A_associated_SNPs_4971 0 0 0 3 197597426 197597446 mRNA hsa-miR-410 CCDC150 miRanda miRanda
14034 chr2 198368085 198368085 1 + T C rs549741484 198368088 + 198368068 198368108 41 ATATTTCTCTTTTATAATAAACTAATGATAACTAATGACAT ATATTTCTCTTTTATAACAAACTAATGATAACTAATGACAT < 41bp 1 0.210713620152737 1 0.24866908788681 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 HSPE1 ENSG00000115541 UTR3 Human protein_coding chr2:198368088 chr2:198368085 . . 0 hm6A_associated_SNPs_4972 0 0 1 1 198368071 198368091 mRNA hsa-miR-590-5p HSPE1 miRanda miRanda
14034 chr2 200828565 200828565 1 + A G rs199836821 200828582 + 200828562 200828602 41 TTTAGCAGTTGCTGTGAAAAACTAAGGAAGAAAAATTTTGG TTTGGCAGTTGCTGTGAAAAACTAAGGAAGAAAAATTTTGG < 41bp 1 0.423318869764985 1 0.308046162128448 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 MAIP1 ENSG00000162972 UTR3 Human protein_coding chr2:200828582 chr2:200828565 . . 0 hm6A_associated_SNPs_4978 0 0 1 2 200828556 200828579 mRNA hsa-miR-27a C2orf47 miRanda miRanda
14034 chr2 200828565 200828565 1 + A G rs199836821 200828582 + 200828562 200828602 41 TTTAGCAGTTGCTGTGAAAAACTAAGGAAGAAAAATTTTGG TTTGGCAGTTGCTGTGAAAAACTAAGGAAGAAAAATTTTGG < 41bp 1 0.423318869764985 1 0.308046162128448 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 MAIP1 ENSG00000162972 UTR3 Human protein_coding chr2:200828582 chr2:200828565 . . 0 hm6A_associated_SNPs_4978 0 0 1 2 200828556 200828579 mRNA hsa-miR-27b C2orf47 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687915 + 201687895 201687935 41 GGCTTAGAGTATTTGCTATAACAAATGAAGTGCAATGACAA GGCTTAGAGTATTTGCTGTAACAAATGAAGTGCAATGACAA < 41bp 1 0.44676549529283 1 0.0504006445407867 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687915 chr2:201687912 . . 0 hm6A_associated_SNPs_4989 0 0 0 6 201687910 201687931 mRNA hsa-miR-25 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687915 + 201687895 201687935 41 GGCTTAGAGTATTTGCTATAACAAATGAAGTGCAATGACAA GGCTTAGAGTATTTGCTGTAACAAATGAAGTGCAATGACAA < 41bp 1 0.44676549529283 1 0.0504006445407867 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687915 chr2:201687912 . . 0 hm6A_associated_SNPs_4989 0 0 0 6 201687911 201687931 mRNA hsa-miR-32 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687915 + 201687895 201687935 41 GGCTTAGAGTATTTGCTATAACAAATGAAGTGCAATGACAA GGCTTAGAGTATTTGCTGTAACAAATGAAGTGCAATGACAA < 41bp 1 0.44676549529283 1 0.0504006445407867 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687915 chr2:201687912 . . 0 hm6A_associated_SNPs_4989 0 0 0 6 201687910 201687931 mRNA hsa-miR-92a BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687915 + 201687895 201687935 41 GGCTTAGAGTATTTGCTATAACAAATGAAGTGCAATGACAA GGCTTAGAGTATTTGCTGTAACAAATGAAGTGCAATGACAA < 41bp 1 0.44676549529283 1 0.0504006445407867 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687915 chr2:201687912 . . 0 hm6A_associated_SNPs_4989 0 0 0 6 201687910 201687931 mRNA hsa-miR-363 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687915 + 201687895 201687935 41 GGCTTAGAGTATTTGCTATAACAAATGAAGTGCAATGACAA GGCTTAGAGTATTTGCTGTAACAAATGAAGTGCAATGACAA < 41bp 1 0.44676549529283 1 0.0504006445407867 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687915 chr2:201687912 . . 0 hm6A_associated_SNPs_4989 0 0 0 6 201687910 201687931 mRNA hsa-miR-367 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687915 + 201687895 201687935 41 GGCTTAGAGTATTTGCTATAACAAATGAAGTGCAATGACAA GGCTTAGAGTATTTGCTGTAACAAATGAAGTGCAATGACAA < 41bp 1 0.44676549529283 1 0.0504006445407867 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687915 chr2:201687912 . . 0 hm6A_associated_SNPs_4989 0 0 0 6 201687909 201687931 mRNA hsa-miR-92b BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687932 + 201687912 201687952 41 ATAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG GTAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG < 41bp 1 0.502277996130746 1 0.0601073503494263 experiment 0.995444007738508 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687932 chr2:201687912 . . 0 hm6A_associated_SNPs_4990 0 0 0 6 201687910 201687931 mRNA hsa-miR-25 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687932 + 201687912 201687952 41 ATAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG GTAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG < 41bp 1 0.502277996130746 1 0.0601073503494263 experiment 0.995444007738508 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687932 chr2:201687912 . . 0 hm6A_associated_SNPs_4990 0 0 0 6 201687911 201687931 mRNA hsa-miR-32 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687932 + 201687912 201687952 41 ATAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG GTAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG < 41bp 1 0.502277996130746 1 0.0601073503494263 experiment 0.995444007738508 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687932 chr2:201687912 . . 0 hm6A_associated_SNPs_4990 0 0 0 6 201687910 201687931 mRNA hsa-miR-92a BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687932 + 201687912 201687952 41 ATAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG GTAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG < 41bp 1 0.502277996130746 1 0.0601073503494263 experiment 0.995444007738508 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687932 chr2:201687912 . . 0 hm6A_associated_SNPs_4990 0 0 0 6 201687910 201687931 mRNA hsa-miR-363 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687932 + 201687912 201687952 41 ATAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG GTAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG < 41bp 1 0.502277996130746 1 0.0601073503494263 experiment 0.995444007738508 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687932 chr2:201687912 . . 0 hm6A_associated_SNPs_4990 0 0 0 6 201687910 201687931 mRNA hsa-miR-367 BZW1 miRanda miRanda
14034 chr2 201687912 201687912 1 + A G rs528644496 201687932 + 201687912 201687952 41 ATAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG GTAACAAATGAAGTGCAATGACAATTATATATTCCTACTCG < 41bp 1 0.502277996130746 1 0.0601073503494263 experiment 0.995444007738508 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 BZW1 ENSG00000082153 UTR3 Human protein_coding chr2:201687932 chr2:201687912 . . 0 hm6A_associated_SNPs_4990 0 0 0 6 201687909 201687931 mRNA hsa-miR-92b BZW1 miRanda miRanda
14034 chr2 201768584 201768584 1 + C T rs79365698 201768569 + 201768549 201768589 41 TCTATCGCTCGTAAGGTAAAACTGTAATATAACTACCATAT TCTATCGCTCGTAAGGTAAAACTGTAATATAACTATCATAT < 41bp 1 0.543679201405384 1 0.0589442849159241 experiment 0.912641597189233 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NIF3L1 ENSG00000196290 UTR3 Human protein_coding chr2:201768569 chr2:201768584 . . 0 hm6A_associated_SNPs_4994 0 0 1 3 201768568 201768587 mRNA hsa-miR-196a NIF3L1 miRanda miRanda
14034 chr2 201768584 201768584 1 + C T rs79365698 201768569 + 201768549 201768589 41 TCTATCGCTCGTAAGGTAAAACTGTAATATAACTACCATAT TCTATCGCTCGTAAGGTAAAACTGTAATATAACTATCATAT < 41bp 1 0.543679201405384 1 0.0589442849159241 experiment 0.912641597189233 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NIF3L1 ENSG00000196290 UTR3 Human protein_coding chr2:201768569 chr2:201768584 . . 0 hm6A_associated_SNPs_4994 0 0 1 3 201768565 201768587 mRNA hsa-miR-196b NIF3L1 miRanda miRanda
14034 chr2 201768584 201768584 1 + C T rs79365698 201768569 + 201768549 201768589 41 TCTATCGCTCGTAAGGTAAAACTGTAATATAACTACCATAT TCTATCGCTCGTAAGGTAAAACTGTAATATAACTATCATAT < 41bp 1 0.543679201405384 1 0.0589442849159241 experiment 0.912641597189233 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NIF3L1 ENSG00000196290 UTR3 Human protein_coding chr2:201768569 chr2:201768584 . . 0 hm6A_associated_SNPs_4994 0 0 1 3 201768584 201768605 mRNA hsa-miR-543 NIF3L1 miRanda miRanda
14034 chr2 201768584 201768584 1 + C T rs79365698 201768596 + 201768576 201768616 41 TATAACTACCATATTAAATAACAAATGTTCATTATAAACTC TATAACTATCATATTAAATAACAAATGTTCATTATAAACTC < 41bp 1 0.473165083296247 1 0.0180177688598633 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 NIF3L1 ENSG00000196290 UTR3 Human protein_coding chr2:201768596 chr2:201768584 . . 0 hm6A_associated_SNPs_4995 0 0 1 3 201768568 201768587 mRNA hsa-miR-196a NIF3L1 miRanda miRanda
14034 chr2 201768584 201768584 1 + C T rs79365698 201768596 + 201768576 201768616 41 TATAACTACCATATTAAATAACAAATGTTCATTATAAACTC TATAACTATCATATTAAATAACAAATGTTCATTATAAACTC < 41bp 1 0.473165083296247 1 0.0180177688598633 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 NIF3L1 ENSG00000196290 UTR3 Human protein_coding chr2:201768596 chr2:201768584 . . 0 hm6A_associated_SNPs_4995 0 0 1 3 201768565 201768587 mRNA hsa-miR-196b NIF3L1 miRanda miRanda
14034 chr2 201768584 201768584 1 + C T rs79365698 201768596 + 201768576 201768616 41 TATAACTACCATATTAAATAACAAATGTTCATTATAAACTC TATAACTATCATATTAAATAACAAATGTTCATTATAAACTC < 41bp 1 0.473165083296247 1 0.0180177688598633 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 NIF3L1 ENSG00000196290 UTR3 Human protein_coding chr2:201768596 chr2:201768584 . . 0 hm6A_associated_SNPs_4995 0 0 1 3 201768584 201768605 mRNA hsa-miR-543 NIF3L1 miRanda miRanda
14034 chr2 201994540 201994540 1 + C T rs10931931 201994533 + 201994513 201994553 41 TGCCTGCTGGCTTTCTGTTGACTGGCCCGGAGCTGTACTGC TGCCTGCTGGCTTTCTGTTGACTGGCCTGGAGCTGTACTGC < 41bp 1 0.481537555076011 1 0.959647834300995 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 28 CFLAR ENSG00000003402 UTR5 Human protein_coding chr2:201994533 chr2:201994540 . . 0 hm6A_associated_SNPs_4996 0 0 1 1 201994539 201994559 mRNA hsa-miR-431 CFLAR miRanda miRanda
14034 chr2 201994540 201994540 1 + C T rs10931931 201994557 + 201994537 201994577 41 GCCCGGAGCTGTACTGCAAGACCCTTGTGAGCTTCCCTAGT GCCTGGAGCTGTACTGCAAGACCCTTGTGAGCTTCCCTAGT < 41bp 1 0.396459266641726 1 0.926923155784607 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 4 CFLAR ENSG00000003402 UTR5 Human protein_coding chr2:201994557 chr2:201994540 . . 0 hm6A_associated_SNPs_4997 0 0 1 1 201994539 201994559 mRNA hsa-miR-431 CFLAR miRanda miRanda
14034 chr2 202025441 202025441 1 + T C rs11892476 202025437 + 202025417 202025457 41 AAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGGCC AAAGATGTTTTTTATTCAGAACTACGTGGTGTCAGAGGGCC < 41bp 1 0.614653621151188 1 0.956162214279175 experiment 0.770692757697623 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 CFLAR ENSG00000003402 CDS Human protein_coding chr2:202025437 chr2:202025441 synonymous SNV . 0 hm6A_associated_SNPs_4998 0 0 1 1 202025438 202025459 mRNA hsa-miR-328 CFLAR miRanda miRanda
14034 chr2 202028582 202028582 1 + C T rs201662663 202028588 + 202028568 202028608 41 CTCCTGGATCTTCACATTGAACTCAATGGCTACATGTATGA CTCCTGGATCTTCATATTGAACTCAATGGCTACATGTATGA < 41bp 1 0.52259083683432 1 0.773476123809814 experiment 0.954818326331359 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 CFLAR ENSG00000003402 CDS Human protein_coding chr2:202028588 chr2:202028582 nonsynonymous SNV . 0 hm6A_associated_SNPs_4999 0 0 1 1 202028582 202028603 mRNA hsa-miR-455-5p CFLAR miRanda miRanda
14034 chr2 202149864 202149864 1 + G A rs549753655 202149853 + 202149833 202149873 41 AGAAAGGTATACCTGTTGAGACTGATTCAGAGGAGCAACCC AGAAAGGTATACCTGTTGAGACTGATTCAGAAGAGCAACCC < 41bp 1 0.756619003972859 1 0.975671291351318 experiment 0.486761992054282 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149853 chr2:202149864 synonymous SNV . 0 hm6A_associated_SNPs_5010 0 0 1 1 202149854 202149875 mRNA hsa-miR-296-3p CASP8 miRanda miRanda
14034 chr2 202344913 202344913 1 + T C rs114200871 202344932 + 202344912 202344952 41 TTTTATGTCCTATATACTTGACACTTTCTCCTTGCTGCTTT TCTTATGTCCTATATACTTGACACTTTCTCCTTGCTGCTTT < 41bp 1 0.751917958886395 1 0.0534815192222595 experiment 0.49616408222721 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 STRADB ENSG00000082146 UTR3 Human protein_coding chr2:202344932 chr2:202344913 . . 0 hm6A_associated_SNPs_5011 0 0 1 2 202344913 202344933 mRNA hsa-miR-26a STRADB miRanda miRanda
14034 chr2 202344913 202344913 1 + T C rs114200871 202344932 + 202344912 202344952 41 TTTTATGTCCTATATACTTGACACTTTCTCCTTGCTGCTTT TCTTATGTCCTATATACTTGACACTTTCTCCTTGCTGCTTT < 41bp 1 0.751917958886395 1 0.0534815192222595 experiment 0.49616408222721 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 STRADB ENSG00000082146 UTR3 Human protein_coding chr2:202344932 chr2:202344913 . . 0 hm6A_associated_SNPs_5011 0 0 1 2 202344907 202344928 mRNA hsa-miR-340 STRADB miRanda miRanda
14034 chr2 204295687 204295687 1 + C T rs536159106 204295676 + 204295656 204295696 41 GTGACCTTTCTGCATTAAGAACTGTTTTTATCTTTTACTAC GTGACCTTTCTGCATTAAGAACTGTTTTTATTTTTTACTAC < 41bp 1 0.096408021283807 1 0.279295325279236 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ABI2 ENSG00000138443 UTR3 Human protein_coding chr2:204295676 chr2:204295687 . . 0 hm6A_associated_SNPs_5028 0 0 1 2 204295678 204295699 mRNA hsa-miR-196a ABI2 miRanda miRanda
14034 chr2 204295687 204295687 1 + C T rs536159106 204295676 + 204295656 204295696 41 GTGACCTTTCTGCATTAAGAACTGTTTTTATCTTTTACTAC GTGACCTTTCTGCATTAAGAACTGTTTTTATTTTTTACTAC < 41bp 1 0.096408021283807 1 0.279295325279236 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ABI2 ENSG00000138443 UTR3 Human protein_coding chr2:204295676 chr2:204295687 . . 0 hm6A_associated_SNPs_5028 0 0 1 2 204295678 204295699 mRNA hsa-miR-196b ABI2 miRanda miRanda
14034 chr2 204296382 204296382 1 + G C rs139978101 204296383 + 204296363 204296403 41 TTTAAGTTTACTTTGTGCTGACCTTTGTTCCTGTTTTGAGA TTTAAGTTTACTTTGTGCTCACCTTTGTTCCTGTTTTGAGA Direct Loss 1 0.0197084518457253 1 0.0416478514671326 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ABI2 ENSG00000138443 UTR3 Human protein_coding chr2:204296383 chr2:204296382 . . 0 hm6A_associated_SNPs_5029 0 0 1 3 204296377 204296398 mRNA hsa-miR-191 ABI2 miRanda miRanda
14034 chr2 204296382 204296382 1 + G C rs139978101 204296383 + 204296363 204296403 41 TTTAAGTTTACTTTGTGCTGACCTTTGTTCCTGTTTTGAGA TTTAAGTTTACTTTGTGCTCACCTTTGTTCCTGTTTTGAGA Direct Loss 1 0.0197084518457253 1 0.0416478514671326 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ABI2 ENSG00000138443 UTR3 Human protein_coding chr2:204296383 chr2:204296382 . . 0 hm6A_associated_SNPs_5029 0 0 1 3 204296362 204296384 mRNA hsa-miR-377 ABI2 miRanda miRanda
14034 chr2 204296382 204296382 1 + G C rs139978101 204296383 + 204296363 204296403 41 TTTAAGTTTACTTTGTGCTGACCTTTGTTCCTGTTTTGAGA TTTAAGTTTACTTTGTGCTCACCTTTGTTCCTGTTTTGAGA Direct Loss 1 0.0197084518457253 1 0.0416478514671326 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ABI2 ENSG00000138443 UTR3 Human protein_coding chr2:204296383 chr2:204296382 . . 0 hm6A_associated_SNPs_5029 0 0 1 3 204296376 204296396 mRNA hsa-miR-873 ABI2 miRanda miRanda
14034 chr2 204599811 204599811 1 + A C rs80306002 204599804 + 204599784 204599824 41 AATATCAAGATCATTTTGAGACTCTGAAATGAAGTAAAAGA AATATCAAGATCATTTTGAGACTCTGACATGAAGTAAAAGA < 41bp 1 0.182398542898177 1 0.828028440475464 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 CD28 ENSG00000178562 UTR3 Human protein_coding chr2:204599804 chr2:204599811 . . 0 hm6A_associated_SNPs_5030 0 0 0 1 204599808 204599829 mRNA hsa-miR-216b CD28 miRanda miRanda
14034 chr2 208618778 208618778 1 + A G rs114285153 208618760 + 208618740 208618780 41 ACAATAGTTTAAATTTTTAGACTTTAAAGACACTAACCATA ACAATAGTTTAAATTTTTAGACTTTAAAGACACTAACCGTA < 41bp 1 0.777444430917058 1 0.800426363945007 experiment 0.445111138165883 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 CCNYL1 ENSG00000272851 ncRNA_exonic Human antisense chr2:208618760 chr2:208618778 . . 0 hm6A_associated_SNPs_5054 0 0 0 1 208618775 208618796 mRNA hsa-miR-494 CCNYL1 miRanda miRanda
14034 chr2 211543089 211543089 1 + C G rs10932349 211543086 + 211543066 211543106 41 TAAGATACTCTATTTTTAAAACACTATCTGCAAACTCAGGA TAAGATACTCTATTTTTAAAACAGTATCTGCAAACTCAGGA < 41bp 1 0.103463243938398 1 0.130438059568405 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 CPS1 ENSG00000021826 UTR3 Human protein_coding chr2:211543086 chr2:211543089 . . 0 hm6A_associated_SNPs_5070 1 0 1 3 211543073 211543094 mRNA hsa-miR-190 CPS1 miRanda miRanda
14034 chr2 211543089 211543089 1 + C G rs10932349 211543086 + 211543066 211543106 41 TAAGATACTCTATTTTTAAAACACTATCTGCAAACTCAGGA TAAGATACTCTATTTTTAAAACAGTATCTGCAAACTCAGGA < 41bp 1 0.103463243938398 1 0.130438059568405 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 CPS1 ENSG00000021826 UTR3 Human protein_coding chr2:211543086 chr2:211543089 . . 0 hm6A_associated_SNPs_5070 1 0 1 3 211543078 211543100 mRNA hsa-miR-450a CPS1 miRanda miRanda
14034 chr2 211543089 211543089 1 + C G rs10932349 211543086 + 211543066 211543106 41 TAAGATACTCTATTTTTAAAACACTATCTGCAAACTCAGGA TAAGATACTCTATTTTTAAAACAGTATCTGCAAACTCAGGA < 41bp 1 0.103463243938398 1 0.130438059568405 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 CPS1 ENSG00000021826 UTR3 Human protein_coding chr2:211543086 chr2:211543089 . . 0 hm6A_associated_SNPs_5070 1 0 1 3 211543072 211543094 mRNA hsa-miR-190b CPS1 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182195 214182215 mRNA hsa-miR-23a SPAG16 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182191 214182213 mRNA hsa-miR-181a SPAG16 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182191 214182213 mRNA hsa-miR-181b SPAG16 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182192 214182213 mRNA hsa-miR-181c SPAG16 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182195 214182215 mRNA hsa-miR-23b SPAG16 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182194 214182216 mRNA hsa-miR-342-3p SPAG16 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182191 214182213 mRNA hsa-miR-181d SPAG16 miRanda miRanda
14034 chr2 214182204 214182204 1 + A G rs541133841 214182185 + 214182165 214182205 41 CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTAA CAGAGCCTTAATTTTTGAAAACTGAATTTTTCTAGTTGTGA < 41bp 1 0.0412929330862209 1 0.287063419818878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182185 chr2:214182204 . . 0 hm6A_associated_SNPs_5072 0 0 1 8 214182193 214182214 mRNA hsa-miR-543 SPAG16 miRanda miRanda
14034 chr2 214182561 214182561 1 + C T rs1127380 214182550 + 214182530 214182570 41 TGTAGGTTCGTCAGTTGTTAACAAATGTATCCCTCTGTTGG TGTAGGTTCGTCAGTTGTTAACAAATGTATCTCTCTGTTGG < 41bp 1 0.0726669615908105 1 0.274546325206757 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182550 chr2:214182561 . . 0 hm6A_associated_SNPs_5073 0 0 1 1 214182557 214182579 mRNA hsa-miR-365 SPAG16 miRanda miRanda
14034 chr2 214182686 214182686 1 + T C rs115029005 214182666 + 214182646 214182686 41 AATTTTGCTATGAACTTAAAACTGCTCTAAAAATAAAGTTT AATTTTGCTATGAACTTAAAACTGCTCTAAAAATAAAGTTC < 41bp 1 0.038821337850532 1 0.403755158185959 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SPAG16 ENSG00000144451 UTR3 Human protein_coding chr2:214182666 chr2:214182686 . . 0 hm6A_associated_SNPs_5074 0 0 1 1 214182673 214182693 mRNA hsa-miR-374a SPAG16 miRanda miRanda
14034 chr2 217070652 217070652 1 + C A rs6941 217070657 + 217070637 217070677 41 GAACCTTTAGAAACTCAAAAACTGAGAAATTTACTACAGTA GAACCTTTAGAAACTAAAAAACTGAGAAATTTACTACAGTA < 41bp 1 0.176692674525152 1 0.186185032129288 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 16 XRCC5 ENSG00000079246 UTR3 Human protein_coding chr2:217070657 chr2:217070652 . . 0 hm6A_associated_SNPs_5084 0 0 1 1 217070642 217070663 mRNA hsa-miR-223 XRCC5 miRanda miRanda
14034 chr2 217070661 217070661 1 + A G rs4987040 217070657 + 217070637 217070677 41 GAACCTTTAGAAACTCAAAAACTGAGAAATTTACTACAGTA GAACCTTTAGAAACTCAAAAACTGGGAAATTTACTACAGTA < 41bp 1 0.168573987315575 1 0.140759944915771 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 25 XRCC5 ENSG00000079246 UTR3 Human protein_coding chr2:217070657 chr2:217070661 . . 0 hm6A_associated_SNPs_5085 0 0 1 2 217070642 217070663 mRNA hsa-miR-223 XRCC5 miRanda miRanda
14034 chr2 217070661 217070661 1 + A G rs4987040 217070657 + 217070637 217070677 41 GAACCTTTAGAAACTCAAAAACTGAGAAATTTACTACAGTA GAACCTTTAGAAACTCAAAAACTGGGAAATTTACTACAGTA < 41bp 1 0.168573987315575 1 0.140759944915771 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 25 XRCC5 ENSG00000079246 UTR3 Human protein_coding chr2:217070657 chr2:217070661 . . 0 hm6A_associated_SNPs_5085 0 0 1 2 217070661 217070681 mRNA hsa-miR-141 XRCC5 miRanda miRanda
14034 chr2 217070736 217070736 1 + G A rs4987041 217070747 + 217070727 217070767 41 GAAAGTTTCGTTATATTAAAACACTTAGGTAACTTTTCGGT GAAAGTTTCATTATATTAAAACACTTAGGTAACTTTTCGGT < 41bp 1 0.311023027367482 1 0.000816583633422852 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 10 XRCC5 ENSG00000079246 UTR3 Human protein_coding chr2:217070747 chr2:217070736 . . 0 hm6A_associated_SNPs_5086 0 0 1 1 217070723 217070743 mRNA hsa-miR-410 XRCC5 miRanda miRanda
14034 chr2 219118818 219118818 1 + A G rs73086112 219118811 + 219118791 219118831 41 AACGAGCTGTGCTTGCAAAGACTTCATAGTTCCCAAGAATT AACGAGCTGTGCTTGCAAAGACTTCATGGTTCCCAAGAATT < 41bp 1 0.740516484774617 1 0.921097815036774 experiment 0.518967030450767 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 ARPC2 ENSG00000163466 UTR3 Human protein_coding chr2:219118811 chr2:219118818 . . 0 hm6A_associated_SNPs_5096 0 0 1 2 219118805 219118827 mRNA hsa-miR-182 ARPC2 miRanda miRanda
14034 chr2 219118818 219118818 1 + A G rs73086112 219118811 + 219118791 219118831 41 AACGAGCTGTGCTTGCAAAGACTTCATAGTTCCCAAGAATT AACGAGCTGTGCTTGCAAAGACTTCATGGTTCCCAAGAATT < 41bp 1 0.740516484774617 1 0.921097815036774 experiment 0.518967030450767 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 ARPC2 ENSG00000163466 UTR3 Human protein_coding chr2:219118811 chr2:219118818 . . 0 hm6A_associated_SNPs_5096 0 0 1 2 219118802 219118825 mRNA hsa-miR-146a ARPC2 miRanda miRanda
14034 chr2 220101301 220101301 1 + A G rs73077099 220101283 + 220101263 220101303 41 TTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAA TTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCGAA < 41bp 1 0.556924056106245 1 0.899417996406555 experiment 0.886151887787509 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 39 ANKZF1 ENSG00000163516 UTR3 Human protein_coding chr2:220101283 chr2:220101301 . . 0 hm6A_associated_SNPs_5119 0 0 1 2 220101288 220101311 mRNA hsa-miR-339-5p ANKZF1 miRanda miRanda
14034 chr2 220101301 220101301 1 + A G rs73077099 220101283 + 220101263 220101303 41 TTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAA TTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCGAA < 41bp 1 0.556924056106245 1 0.899417996406555 experiment 0.886151887787509 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 39 ANKZF1 ENSG00000163516 UTR3 Human protein_coding chr2:220101283 chr2:220101301 . . 0 hm6A_associated_SNPs_5119 0 0 1 2 220101299 220101321 mRNA hsa-miR-875-5p ANKZF1 miRanda miRanda
14034 chr2 220113555 220113555 1 + C T rs148942163 220113567 + 220113547 220113587 41 TGAGCTCACATAGTGTTCTGACTCCAAATCTGGGAGCAGGA TGAGCTCATATAGTGTTCTGACTCCAAATCTGGGAGCAGGA < 41bp 1 0.368020556913955 1 0.241444289684296 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 9 STK16 ENSG00000115661 UTR3 Human protein_coding chr2:220113567 chr2:220113555 . . 0 hm6A_associated_SNPs_5121 0 0 1 1 220113550 220113571 mRNA hsa-miR-383 STK16 miRanda miRanda
14034 chr2 223806490 223806490 1 + C T rs541141828 223806478 + 223806458 223806498 41 AACTCCATTCCTCATATTAAACTATTACTTCTCATGACGTC AACTCCATTCCTCATATTAAACTATTACTTCTTATGACGTC < 41bp 1 0.753250443643242 1 0.88201892375946 experiment 0.493499112713516 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 ACSL3 ENSG00000123983 UTR3 Human protein_coding chr2:223806478 chr2:223806490 . . 0 hm6A_associated_SNPs_5125 0 0 1 1 223806474 223806495 mRNA hsa-miR-433 ACSL3 miRanda miRanda
14034 chr2 223806490 223806490 1 + C T rs541141828 223806509 + 223806489 223806529 41 TCATGACGTCACCATTTTTAACTGACAGGATTAGTAAAACA TTATGACGTCACCATTTTTAACTGACAGGATTAGTAAAACA < 41bp 1 0.460539502195501 1 0.942194581031799 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 ACSL3 ENSG00000123983 UTR3 Human protein_coding chr2:223806509 chr2:223806490 . . 0 hm6A_associated_SNPs_5126 0 0 1 1 223806474 223806495 mRNA hsa-miR-433 ACSL3 miRanda miRanda
14034 chr2 228177138 228177138 1 + G C rs112338364 228177120 + 228177100 228177140 41 AAGGCCTGATGGAACACAGAACTGAACTGAGGTTCATGGAT AAGGCCTGATGGAACACAGAACTGAACTGAGGTTCATGCAT < 41bp 1 0.146220671447671 1 0.94953978061676 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 LOC654841 ENSG00000236432 ncRNA_intronic Human antisense chr2:228177120 chr2:228177138 . . 0 hm6A_associated_SNPs_5130 0 0 0 2 228177135 228177155 mRNA hsa-miR-212 COL4A3 miRanda miRanda
14034 chr2 228177138 228177138 1 + G C rs112338364 228177120 + 228177100 228177140 41 AAGGCCTGATGGAACACAGAACTGAACTGAGGTTCATGGAT AAGGCCTGATGGAACACAGAACTGAACTGAGGTTCATGCAT < 41bp 1 0.146220671447671 1 0.94953978061676 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 LOC654841 ENSG00000236432 ncRNA_intronic Human antisense chr2:228177120 chr2:228177138 . . 0 hm6A_associated_SNPs_5130 0 0 0 2 228177130 228177155 mRNA hsa-miR-132 COL4A3 miRanda miRanda
14034 chr2 228222271 228222271 1 + G A rs1127399 228222258 + 228222238 228222278 41 TTAAGCAGTTTTGTTAATAGACATTTTTGCATCGACACTTC TTAAGCAGTTTTGTTAATAGACATTTTTGCATCAACACTTC < 41bp 1 0.527264368284288 1 0.883991122245789 experiment 0.945471263431424 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 MFF ENSG00000168958 UTR3 Human protein_coding chr2:228222258 chr2:228222271 . . 0 hm6A_associated_SNPs_5133 0 0 1 1 228222263 228222283 mRNA hsa-miR-653 MFF miRanda miRanda
14034 chr2 231683690 231683690 1 + T C rs115143121 231683675 + 231683655 231683695 41 CTGTGCTACGGGAGTTCTGAACATGGCTGGGTTCATGAAGG CTGTGCTACGGGAGTTCTGAACATGGCTGGGTTCACGAAGG < 41bp 1 0.66250859915268 1 0.935644865036011 experiment 0.67498280169464 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 CAB39 ENSG00000135932 UTR3 Human protein_coding chr2:231683675 chr2:231683690 . . 0 hm6A_associated_SNPs_5144 0 0 1 1 231683672 231683696 mRNA hsa-miR-205 CAB39 miRanda miRanda
14034 chr2 231684286 231684286 1 + G C rs561900584 231684299 + 231684279 231684319 41 ATACTGAGTTTTTGCAAAAAACAATGAATGCTCATATGTAA ATACTGACTTTTTGCAAAAAACAATGAATGCTCATATGTAA < 41bp 1 0.719999019682858 1 0.409003138542175 experiment 0.560001960634283 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 CAB39 ENSG00000135932 UTR3 Human protein_coding chr2:231684299 chr2:231684286 . . 0 hm6A_associated_SNPs_5149 0 0 1 3 231684274 231684296 mRNA hsa-miR-19a CAB39 miRanda miRanda
14034 chr2 231684286 231684286 1 + G C rs561900584 231684299 + 231684279 231684319 41 ATACTGAGTTTTTGCAAAAAACAATGAATGCTCATATGTAA ATACTGACTTTTTGCAAAAAACAATGAATGCTCATATGTAA < 41bp 1 0.719999019682858 1 0.409003138542175 experiment 0.560001960634283 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 CAB39 ENSG00000135932 UTR3 Human protein_coding chr2:231684299 chr2:231684286 . . 0 hm6A_associated_SNPs_5149 0 0 1 3 231684274 231684296 mRNA hsa-miR-19b CAB39 miRanda miRanda
14034 chr2 231684286 231684286 1 + G C rs561900584 231684299 + 231684279 231684319 41 ATACTGAGTTTTTGCAAAAAACAATGAATGCTCATATGTAA ATACTGACTTTTTGCAAAAAACAATGAATGCTCATATGTAA < 41bp 1 0.719999019682858 1 0.409003138542175 experiment 0.560001960634283 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 CAB39 ENSG00000135932 UTR3 Human protein_coding chr2:231684299 chr2:231684286 . . 0 hm6A_associated_SNPs_5149 0 0 1 3 231684279 231684299 mRNA hsa-miR-129-5p CAB39 miRanda miRanda
14034 chr2 231912584 231912584 1 + A G rs115019221 231912568 + 231912548 231912588 41 CTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCC CTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACGTGCC < 41bp 1 0.180117989155943 1 0.341014444828033 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 37 C2orf72 ENSG00000204128 UTR3 Human protein_coding chr2:231912568 chr2:231912584 . . 0 hm6A_associated_SNPs_5152 0 0 0 1 231912566 231912589 mRNA hsa-miR-34c-5p C2orf72 miRanda miRanda
14034 chr2 232156083 232156083 1 + A C rs146650763 232156076 + 232156056 232156096 41 ATACTTCTAGGGAATGGAAGACATCCTACGCTGCTTCATCA ATACTTCTAGGGAATGGAAGACATCCTCCGCTGCTTCATCA < 41bp 1 0.354858205921684 1 0.616503477096558 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 28 ARMC9 ENSG00000135931 CDS Human protein_coding chr2:232156076 chr2:232156083 synonymous SNV . 0 hm6A_associated_SNPs_5157 0 0 0 1 232156067 232156091 mRNA hsa-miR-503 ARMC9 miRanda miRanda
14034 chr2 232156084 232156084 1 + C T rs148296188 232156076 + 232156056 232156096 41 ATACTTCTAGGGAATGGAAGACATCCTACGCTGCTTCATCA ATACTTCTAGGGAATGGAAGACATCCTATGCTGCTTCATCA < 41bp 1 0.329815301338414 1 0.486406087875366 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 29 ARMC9 ENSG00000135931 CDS Human protein_coding chr2:232156076 chr2:232156084 nonsynonymous SNV 0.939 2 hm6A_associated_SNPs_5158 0 0 0 1 232156067 232156091 mRNA hsa-miR-503 ARMC9 miRanda miRanda
14034 chr2 232577933 232577933 1 + C A rs186289669 232577936 + 232577916 232577956 41 CGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACCA CGTTCTCTGTCCTACTTATGACTTTACTTGTGGTGTGACCA < 41bp 1 0.564746078422333 1 0.979944050312042 experiment 0.870507843155334 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 PTMA ENSG00000187514 UTR3 Human protein_coding chr2:232577936 chr2:232577933 . . 0 hm6A_associated_SNPs_5161 0 0 1 3 232577932 232577954 mRNA hsa-miR-377 PTMA miRanda miRanda
14034 chr2 232577933 232577933 1 + C A rs186289669 232577936 + 232577916 232577956 41 CGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACCA CGTTCTCTGTCCTACTTATGACTTTACTTGTGGTGTGACCA < 41bp 1 0.564746078422333 1 0.979944050312042 experiment 0.870507843155334 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 PTMA ENSG00000187514 UTR3 Human protein_coding chr2:232577936 chr2:232577933 . . 0 hm6A_associated_SNPs_5161 0 0 1 3 232577933 232577955 mRNA hsa-miR-342-3p PTMA miRanda miRanda
14034 chr2 232577933 232577933 1 + C A rs186289669 232577936 + 232577916 232577956 41 CGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACCA CGTTCTCTGTCCTACTTATGACTTTACTTGTGGTGTGACCA < 41bp 1 0.564746078422333 1 0.979944050312042 experiment 0.870507843155334 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 PTMA ENSG00000187514 UTR3 Human protein_coding chr2:232577936 chr2:232577933 . . 0 hm6A_associated_SNPs_5161 0 0 1 3 232577932 232577954 mRNA hsa-miR-329 PTMA miRanda miRanda
14034 chr2 232577933 232577933 1 + C A rs186289669 232577953 + 232577933 232577973 41 CTGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCA ATGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCA < 41bp 1 0.20282064373447 1 0.947444200515747 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 PTMA ENSG00000187514 UTR3 Human protein_coding chr2:232577953 chr2:232577933 . . 0 hm6A_associated_SNPs_5162 0 0 1 3 232577932 232577954 mRNA hsa-miR-377 PTMA miRanda miRanda
14034 chr2 232577933 232577933 1 + C A rs186289669 232577953 + 232577933 232577973 41 CTGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCA ATGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCA < 41bp 1 0.20282064373447 1 0.947444200515747 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 PTMA ENSG00000187514 UTR3 Human protein_coding chr2:232577953 chr2:232577933 . . 0 hm6A_associated_SNPs_5162 0 0 1 3 232577933 232577955 mRNA hsa-miR-342-3p PTMA miRanda miRanda
14034 chr2 232577933 232577933 1 + C A rs186289669 232577953 + 232577933 232577973 41 CTGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCA ATGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCA < 41bp 1 0.20282064373447 1 0.947444200515747 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 PTMA ENSG00000187514 UTR3 Human protein_coding chr2:232577953 chr2:232577933 . . 0 hm6A_associated_SNPs_5162 0 0 1 3 232577932 232577954 mRNA hsa-miR-329 PTMA miRanda miRanda
14034 chr2 233201405 233201405 1 + G A rs558913651 233201401 + 233201381 233201421 41 CCCGCCACACTGGCTTTAGGACCTGTTGACACGGAGGGGGG CCCGCCACACTGGCTTTAGGACCTATTGACACGGAGGGGGG < 41bp 1 0.663619850753314 1 0.959003686904907 experiment 0.672760298493372 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 DIS3L2 ENSG00000144535 UTR3 Human protein_coding chr2:233201401 chr2:233201405 . . 0 hm6A_associated_SNPs_5164 0 0 1 1 233201390 233201411 mRNA hsa-miR-505 DIS3L2 miRanda miRanda
14034 chr2 233201405 233201405 1 + G A rs558913651 233201409 + 233201389 233201429 41 ACTGGCTTTAGGACCTGTTGACACGGAGGGGGGTTTTTAAT ACTGGCTTTAGGACCTATTGACACGGAGGGGGGTTTTTAAT < 41bp 1 0.575477330529504 1 0.953874945640564 experiment 0.849045338940992 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 DIS3L2 ENSG00000144535 UTR3 Human protein_coding chr2:233201409 chr2:233201405 . . 0 hm6A_associated_SNPs_5165 0 0 1 1 233201390 233201411 mRNA hsa-miR-505 DIS3L2 miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324166 + 233324146 233324186 41 TGCGGCTGCCTGCACCCCAGACAATAAAGGGACCAAAACCA TGCGGCTGCCTGCACCCCAGACAATAAAGGAACCAAAACCA < 41bp 1 0.315702109644316 1 0.990772902965546 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324166 chr2:233324176 . . 0 hm6A_associated_SNPs_5174 0 0 1 4 233324157 233324178 mRNA hsa-miR-204 ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324166 + 233324146 233324186 41 TGCGGCTGCCTGCACCCCAGACAATAAAGGGACCAAAACCA TGCGGCTGCCTGCACCCCAGACAATAAAGGAACCAAAACCA < 41bp 1 0.315702109644316 1 0.990772902965546 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324166 chr2:233324176 . . 0 hm6A_associated_SNPs_5174 0 0 1 4 233324157 233324178 mRNA hsa-miR-211 ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324166 + 233324146 233324186 41 TGCGGCTGCCTGCACCCCAGACAATAAAGGGACCAAAACCA TGCGGCTGCCTGCACCCCAGACAATAAAGGAACCAAAACCA < 41bp 1 0.315702109644316 1 0.990772902965546 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324166 chr2:233324176 . . 0 hm6A_associated_SNPs_5174 0 0 1 4 233324161 233324182 mRNA hsa-miR-133a ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324166 + 233324146 233324186 41 TGCGGCTGCCTGCACCCCAGACAATAAAGGGACCAAAACCA TGCGGCTGCCTGCACCCCAGACAATAAAGGAACCAAAACCA < 41bp 1 0.315702109644316 1 0.990772902965546 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324166 chr2:233324176 . . 0 hm6A_associated_SNPs_5174 0 0 1 4 233324161 233324182 mRNA hsa-miR-133b ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324177 + 233324157 233324197 41 GCACCCCAGACAATAAAGGGACCAAAACCACCCAACCCCCA GCACCCCAGACAATAAAGGAACCAAAACCACCCAACCCCCA < 41bp 1 0.236144471143488 1 0.989715039730072 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324177 chr2:233324176 . . 0 hm6A_associated_SNPs_5175 0 0 1 4 233324157 233324178 mRNA hsa-miR-204 ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324177 + 233324157 233324197 41 GCACCCCAGACAATAAAGGGACCAAAACCACCCAACCCCCA GCACCCCAGACAATAAAGGAACCAAAACCACCCAACCCCCA < 41bp 1 0.236144471143488 1 0.989715039730072 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324177 chr2:233324176 . . 0 hm6A_associated_SNPs_5175 0 0 1 4 233324157 233324178 mRNA hsa-miR-211 ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324177 + 233324157 233324197 41 GCACCCCAGACAATAAAGGGACCAAAACCACCCAACCCCCA GCACCCCAGACAATAAAGGAACCAAAACCACCCAACCCCCA < 41bp 1 0.236144471143488 1 0.989715039730072 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324177 chr2:233324176 . . 0 hm6A_associated_SNPs_5175 0 0 1 4 233324161 233324182 mRNA hsa-miR-133a ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324177 + 233324157 233324197 41 GCACCCCAGACAATAAAGGGACCAAAACCACCCAACCCCCA GCACCCCAGACAATAAAGGAACCAAAACCACCCAACCCCCA < 41bp 1 0.236144471143488 1 0.989715039730072 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324177 chr2:233324176 . . 0 hm6A_associated_SNPs_5175 0 0 1 4 233324161 233324182 mRNA hsa-miR-133b ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324183 + 233324163 233324203 41 CAGACAATAAAGGGACCAAAACCACCCAACCCCCACCCTGC CAGACAATAAAGGAACCAAAACCACCCAACCCCCACCCTGC < 41bp 1 0.137605273400799 1 0.98954176902771 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324183 chr2:233324176 . . 0 hm6A_associated_SNPs_5176 0 0 1 4 233324157 233324178 mRNA hsa-miR-204 ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324183 + 233324163 233324203 41 CAGACAATAAAGGGACCAAAACCACCCAACCCCCACCCTGC CAGACAATAAAGGAACCAAAACCACCCAACCCCCACCCTGC < 41bp 1 0.137605273400799 1 0.98954176902771 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324183 chr2:233324176 . . 0 hm6A_associated_SNPs_5176 0 0 1 4 233324157 233324178 mRNA hsa-miR-211 ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324183 + 233324163 233324203 41 CAGACAATAAAGGGACCAAAACCACCCAACCCCCACCCTGC CAGACAATAAAGGAACCAAAACCACCCAACCCCCACCCTGC < 41bp 1 0.137605273400799 1 0.98954176902771 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324183 chr2:233324176 . . 0 hm6A_associated_SNPs_5176 0 0 1 4 233324161 233324182 mRNA hsa-miR-133a ALPI miRanda miRanda
14034 chr2 233324176 233324176 1 + G A rs111855173 233324183 + 233324163 233324203 41 CAGACAATAAAGGGACCAAAACCACCCAACCCCCACCCTGC CAGACAATAAAGGAACCAAAACCACCCAACCCCCACCCTGC < 41bp 1 0.137605273400799 1 0.98954176902771 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324183 chr2:233324176 . . 0 hm6A_associated_SNPs_5176 0 0 1 4 233324161 233324182 mRNA hsa-miR-133b ALPI miRanda miRanda
14034 chr2 233446198 233446198 1 + T G rs372307848 233446200 + 233446180 233446220 41 GCTGTGTTACTGATGTGATGACTGTCCAGGATTTTGTATCA GCTGTGTTACTGATGTGAGGACTGTCCAGGATTTTGTATCA < 41bp 1 0.627861454774326 1 0.858956754207611 experiment 0.744277090451347 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 EIF4E2 ENSG00000237126 ncRNA_intronic Human antisense chr2:233446200 chr2:233446198 . . 0 hm6A_associated_SNPs_5183 0 0 1 1 233446174 233446198 mRNA hsa-miR-377 EIF4E2 miRanda miRanda
14034 chr2 233568186 233568186 1 + G T rs79556858 233568179 + 233568159 233568199 41 GCTCAAATCTCCTGCTGTGAACCAGCAGAATTTTTGAACAG GCTCAAATCTCCTGCTGTGAACCAGCATAATTTTTGAACAG < 41bp 1 0.0908488808250277 1 0.0130132436752319 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 28 GIGYF2 ENSG00000204120 UTR5 Human protein_coding chr2:233568179 chr2:233568186 . . 0 hm6A_associated_SNPs_5186 0 0 1 1 233568182 233568199 mRNA hsa-miR-490-3p GIGYF2 miRanda miRanda
14034 chr2 233568191 233568191 1 + T A rs115114309 233568179 + 233568159 233568199 41 GCTCAAATCTCCTGCTGTGAACCAGCAGAATTTTTGAACAG GCTCAAATCTCCTGCTGTGAACCAGCAGAATTATTGAACAG < 41bp 1 0.104403838193577 1 0.0214710533618927 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 33 GIGYF2 ENSG00000204120 UTR5 Human protein_coding chr2:233568179 chr2:233568191 . . 0 hm6A_associated_SNPs_5187 0 0 1 1 233568182 233568199 mRNA hsa-miR-490-3p GIGYF2 miRanda miRanda
14034 chr2 233721684 233721684 1 + A C rs6731064 233721685 + 233721665 233721705 41 ACTCTGCAACAAATCACAGAACCGATCATCTCAGGCTTTTT ACTCTGCAACAAATCACAGCACCGATCATCTCAGGCTTTTT Direct Loss 1 0.775262083461249 1 0.84967303276062 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 GIGYF2 ENSG00000204120 UTR3 Human protein_coding chr2:233721685 chr2:233721684 . . 0 hm6A_associated_SNPs_5188 0 0 1 4 233721675 233721697 mRNA hsa-miR-143 GIGYF2 miRanda miRanda
14034 chr2 233721684 233721684 1 + A C rs6731064 233721685 + 233721665 233721705 41 ACTCTGCAACAAATCACAGAACCGATCATCTCAGGCTTTTT ACTCTGCAACAAATCACAGCACCGATCATCTCAGGCTTTTT Direct Loss 1 0.775262083461249 1 0.84967303276062 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 GIGYF2 ENSG00000204120 UTR3 Human protein_coding chr2:233721685 chr2:233721684 . . 0 hm6A_associated_SNPs_5188 0 0 1 4 233721682 233721704 mRNA hsa-miR-320a GIGYF2 miRanda miRanda
14034 chr2 233721684 233721684 1 + A C rs6731064 233721685 + 233721665 233721705 41 ACTCTGCAACAAATCACAGAACCGATCATCTCAGGCTTTTT ACTCTGCAACAAATCACAGCACCGATCATCTCAGGCTTTTT Direct Loss 1 0.775262083461249 1 0.84967303276062 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 GIGYF2 ENSG00000204120 UTR3 Human protein_coding chr2:233721685 chr2:233721684 . . 0 hm6A_associated_SNPs_5188 0 0 1 4 233721682 233721704 mRNA hsa-miR-320b GIGYF2 miRanda miRanda
14034 chr2 233721684 233721684 1 + A C rs6731064 233721685 + 233721665 233721705 41 ACTCTGCAACAAATCACAGAACCGATCATCTCAGGCTTTTT ACTCTGCAACAAATCACAGCACCGATCATCTCAGGCTTTTT Direct Loss 1 0.775262083461249 1 0.84967303276062 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 GIGYF2 ENSG00000204120 UTR3 Human protein_coding chr2:233721685 chr2:233721684 . . 0 hm6A_associated_SNPs_5188 0 0 1 4 233721684 233721704 mRNA hsa-miR-320c GIGYF2 miRanda miRanda
14034 chr2 234115521 234115521 1 + T C rs562544167 234115527 + 234115507 234115547 41 CAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTGAGG CAGAGTTCACTGCCCGTGAGACTTAGCACCAAGTGCTGAGG < 41bp 1 0.51471948998021 1 0.782795965671539 experiment 0.97056102003958 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 15 INPP5D ENSG00000168918 UTR3 Human protein_coding chr2:234115527 chr2:234115521 . . 0 hm6A_associated_SNPs_5195 0 0 1 4 234115499 234115521 mRNA hsa-miR-34a INPP5D miRanda miRanda
14034 chr2 234115521 234115521 1 + T C rs562544167 234115527 + 234115507 234115547 41 CAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTGAGG CAGAGTTCACTGCCCGTGAGACTTAGCACCAAGTGCTGAGG < 41bp 1 0.51471948998021 1 0.782795965671539 experiment 0.97056102003958 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 15 INPP5D ENSG00000168918 UTR3 Human protein_coding chr2:234115527 chr2:234115521 . . 0 hm6A_associated_SNPs_5195 0 0 1 4 234115500 234115521 mRNA hsa-miR-34c-5p INPP5D miRanda miRanda
14034 chr2 234115521 234115521 1 + T C rs562544167 234115527 + 234115507 234115547 41 CAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTGAGG CAGAGTTCACTGCCCGTGAGACTTAGCACCAAGTGCTGAGG < 41bp 1 0.51471948998021 1 0.782795965671539 experiment 0.97056102003958 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 15 INPP5D ENSG00000168918 UTR3 Human protein_coding chr2:234115527 chr2:234115521 . . 0 hm6A_associated_SNPs_5195 0 0 1 4 234115498 234115521 mRNA hsa-miR-449a INPP5D miRanda miRanda
14034 chr2 234115521 234115521 1 + T C rs562544167 234115527 + 234115507 234115547 41 CAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTGAGG CAGAGTTCACTGCCCGTGAGACTTAGCACCAAGTGCTGAGG < 41bp 1 0.51471948998021 1 0.782795965671539 experiment 0.97056102003958 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 15 INPP5D ENSG00000168918 UTR3 Human protein_coding chr2:234115527 chr2:234115521 . . 0 hm6A_associated_SNPs_5195 0 0 1 4 234115498 234115521 mRNA hsa-miR-449b INPP5D miRanda miRanda
14034 chr2 234115739 234115739 1 + A G rs14243 234115730 + 234115710 234115750 41 ATAATGGCCACATGGATCGAACACTCATGATGTGCCAAGTG ATAATGGCCACATGGATCGAACACTCATGGTGTGCCAAGTG < 41bp 1 0.544549805668478 1 0.917457938194275 experiment 0.910900388663044 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 INPP5D ENSG00000168918 UTR3 Human protein_coding chr2:234115730 chr2:234115739 . . 0 hm6A_associated_SNPs_5198 0 0 0 2 234115726 234115748 mRNA hsa-miR-96 INPP5D miRanda miRanda
14034 chr2 234115739 234115739 1 + A G rs14243 234115730 + 234115710 234115750 41 ATAATGGCCACATGGATCGAACACTCATGATGTGCCAAGTG ATAATGGCCACATGGATCGAACACTCATGGTGTGCCAAGTG < 41bp 1 0.544549805668478 1 0.917457938194275 experiment 0.910900388663044 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 INPP5D ENSG00000168918 UTR3 Human protein_coding chr2:234115730 chr2:234115739 . . 0 hm6A_associated_SNPs_5198 0 0 0 2 234115727 234115748 mRNA hsa-miR-1271 INPP5D miRanda miRanda
14034 chr2 234203256 234203256 1 + A G rs370820742 234203254 + 234203234 234203274 41 TCAGGTTCTTGCCTTGGGAAACACTACTAGCTCTGACCTTC TCAGGTTCTTGCCTTGGGAAACGCTACTAGCTCTGACCTTC Direct Loss 1 0.444672473353228 1 0.803737938404083 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ATG16L1 ENSG00000085978 UTR3 Human protein_coding chr2:234203254 chr2:234203256 . . 0 hm6A_associated_SNPs_5200 0 0 1 1 234203239 234203261 mRNA hsa-miR-142-3p ATG16L1 miRanda miRanda
14034 chr2 235963693 235963693 1 + A G rs75556478 235963688 + 235963668 235963708 41 TGACTCACATAAAATCAGGAACTTGACACAGTGTTGCATTA TGACTCACATAAAATCAGGAACTTGGCACAGTGTTGCATTA < 41bp 1 0.597780066872215 1 0.918913602828979 experiment 0.804439866255569 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 SH3BP4 ENSG00000130147 UTR3 Human protein_coding chr2:235963688 chr2:235963693 . . 0 hm6A_associated_SNPs_5215 0 0 1 2 235963685 235963703 mRNA hsa-miR-141 SH3BP4 miRanda miRanda
14034 chr2 235963693 235963693 1 + A G rs75556478 235963688 + 235963668 235963708 41 TGACTCACATAAAATCAGGAACTTGACACAGTGTTGCATTA TGACTCACATAAAATCAGGAACTTGGCACAGTGTTGCATTA < 41bp 1 0.597780066872215 1 0.918913602828979 experiment 0.804439866255569 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 SH3BP4 ENSG00000130147 UTR3 Human protein_coding chr2:235963688 chr2:235963693 . . 0 hm6A_associated_SNPs_5215 0 0 1 2 235963679 235963703 mRNA hsa-miR-200a SH3BP4 miRanda miRanda
14034 chr2 235963693 235963693 1 + A G rs75556478 235963712 + 235963692 235963732 41 GACACAGTGTTGCATTAATAACTTTAGGGTGCAGACATGCT GGCACAGTGTTGCATTAATAACTTTAGGGTGCAGACATGCT < 41bp 1 0.562534437863074 1 0.833595037460327 experiment 0.874931124273852 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 SH3BP4 ENSG00000130147 UTR3 Human protein_coding chr2:235963712 chr2:235963693 . . 0 hm6A_associated_SNPs_5216 0 0 1 2 235963685 235963703 mRNA hsa-miR-141 SH3BP4 miRanda miRanda
14034 chr2 235963693 235963693 1 + A G rs75556478 235963712 + 235963692 235963732 41 GACACAGTGTTGCATTAATAACTTTAGGGTGCAGACATGCT GGCACAGTGTTGCATTAATAACTTTAGGGTGCAGACATGCT < 41bp 1 0.562534437863074 1 0.833595037460327 experiment 0.874931124273852 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 SH3BP4 ENSG00000130147 UTR3 Human protein_coding chr2:235963712 chr2:235963693 . . 0 hm6A_associated_SNPs_5216 0 0 1 2 235963679 235963703 mRNA hsa-miR-200a SH3BP4 miRanda miRanda
14034 chr2 238672931 238672931 1 + C A rs528525874 238672930 + 238672910 238672950 41 TCTACTGCTTTAAGTTATAGACTGTTACTTGTAGATTTCCA TCTACTGCTTTAAGTTATAGAATGTTACTTGTAGATTTCCA Direct Loss 1 0.754600536386087 1 0.127217292785645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238672930 chr2:238672931 . . 0 hm6A_associated_SNPs_5230 0 0 1 4 238672916 238672936 mRNA hsa-miR-212 LRRFIP1 miRanda miRanda
14034 chr2 238672931 238672931 1 + C A rs528525874 238672930 + 238672910 238672950 41 TCTACTGCTTTAAGTTATAGACTGTTACTTGTAGATTTCCA TCTACTGCTTTAAGTTATAGAATGTTACTTGTAGATTTCCA Direct Loss 1 0.754600536386087 1 0.127217292785645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238672930 chr2:238672931 . . 0 hm6A_associated_SNPs_5230 0 0 1 4 238672924 238672947 mRNA hsa-miR-216a LRRFIP1 miRanda miRanda
14034 chr2 238672931 238672931 1 + C A rs528525874 238672930 + 238672910 238672950 41 TCTACTGCTTTAAGTTATAGACTGTTACTTGTAGATTTCCA TCTACTGCTTTAAGTTATAGAATGTTACTTGTAGATTTCCA Direct Loss 1 0.754600536386087 1 0.127217292785645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238672930 chr2:238672931 . . 0 hm6A_associated_SNPs_5230 0 0 1 4 238672915 238672936 mRNA hsa-miR-132 LRRFIP1 miRanda miRanda
14034 chr2 238672931 238672931 1 + C A rs528525874 238672930 + 238672910 238672950 41 TCTACTGCTTTAAGTTATAGACTGTTACTTGTAGATTTCCA TCTACTGCTTTAAGTTATAGAATGTTACTTGTAGATTTCCA Direct Loss 1 0.754600536386087 1 0.127217292785645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238672930 chr2:238672931 . . 0 hm6A_associated_SNPs_5230 0 0 1 4 238672913 238672938 mRNA hsa-miR-194 LRRFIP1 miRanda miRanda
14034 chr2 238672938 238672938 1 + T C rs56151225 238672930 + 238672910 238672950 41 TCTACTGCTTTAAGTTATAGACTGTTACTTGTAGATTTCCA TCTACTGCTTTAAGTTATAGACTGTTACCTGTAGATTTCCA < 41bp 1 0.78338878156001 1 0.749099254608154 experiment 0.433222436879981 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238672930 chr2:238672938 . . 0 hm6A_associated_SNPs_5231 0 0 1 2 238672924 238672947 mRNA hsa-miR-216a LRRFIP1 miRanda miRanda
14034 chr2 238672938 238672938 1 + T C rs56151225 238672930 + 238672910 238672950 41 TCTACTGCTTTAAGTTATAGACTGTTACTTGTAGATTTCCA TCTACTGCTTTAAGTTATAGACTGTTACCTGTAGATTTCCA < 41bp 1 0.78338878156001 1 0.749099254608154 experiment 0.433222436879981 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238672930 chr2:238672938 . . 0 hm6A_associated_SNPs_5231 0 0 1 2 238672913 238672938 mRNA hsa-miR-194 LRRFIP1 miRanda miRanda
14034 chr2 238688669 238688669 1 + C A rs533789710 238688657 + 238688637 238688677 41 CTACGCTTTTCATACACAAAACACTGTGGAACCACAAGCCA CTACGCTTTTCATACACAAAACACTGTGGAACAACAAGCCA < 41bp 1 0.503680141600354 1 0.988860487937927 experiment 0.992639716799291 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 33 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688657 chr2:238688669 . . 0 hm6A_associated_SNPs_5238 0 0 0 3 238688655 238688679 mRNA hsa-miR-135a LRRFIP1 miRanda miRanda
14034 chr2 238688669 238688669 1 + C A rs533789710 238688657 + 238688637 238688677 41 CTACGCTTTTCATACACAAAACACTGTGGAACCACAAGCCA CTACGCTTTTCATACACAAAACACTGTGGAACAACAAGCCA < 41bp 1 0.503680141600354 1 0.988860487937927 experiment 0.992639716799291 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 33 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688657 chr2:238688669 . . 0 hm6A_associated_SNPs_5238 0 0 0 3 238688653 238688675 mRNA hsa-miR-9 LRRFIP1 miRanda miRanda
14034 chr2 238688669 238688669 1 + C A rs533789710 238688657 + 238688637 238688677 41 CTACGCTTTTCATACACAAAACACTGTGGAACCACAAGCCA CTACGCTTTTCATACACAAAACACTGTGGAACAACAAGCCA < 41bp 1 0.503680141600354 1 0.988860487937927 experiment 0.992639716799291 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 33 LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688657 chr2:238688669 . . 0 hm6A_associated_SNPs_5238 0 0 0 3 238688655 238688679 mRNA hsa-miR-135b LRRFIP1 miRanda miRanda
14034 chr2 241570481 241570481 1 + C T rs35230312 241570480 + 241570460 241570500 41 TCTCTTGGGAAGAGAGAGGGACAGGGACAAGGGCAAGAGGA TCTCTTGGGAAGAGAGAGGGATAGGGACAAGGGCAAGAGGA Direct Loss 1 0.289583781449515 1 0.881259143352509 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 GPR35 ENSG00000178623 UTR3 Human protein_coding chr2:241570480 chr2:241570481 . . 0 hm6A_associated_SNPs_5259 0 0 1 1 241570464 241570486 mRNA hsa-miR-339-5p GPR35 miRanda miRanda
14034 chr2 242031634 242031634 1 + G A rs141551386 242031648 + 242031628 242031668 41 GTCGACGAGCCATCCTATGGACTAGTTAACACTAAGGTGGA GTCGACAAGCCATCCTATGGACTAGTTAACACTAAGGTGGA < 41bp 1 0.281370586864241 1 0.997559547424316 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 SNED1 ENSG00000162804 UTR3 Human protein_coding chr2:242031648 chr2:242031634 . . 0 hm6A_associated_SNPs_5265 0 0 0 1 242031634 242031655 mRNA hsa-miR-132 SNED1 miRanda miRanda
14034 chr2 242031643 242031643 1 + T C rs375671405 242031648 + 242031628 242031668 41 GTCGACGAGCCATCCTATGGACTAGTTAACACTAAGGTGGA GTCGACGAGCCATCCCATGGACTAGTTAACACTAAGGTGGA < 41bp 1 0.306585950773924 1 0.997590959072113 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 SNED1 ENSG00000162804 UTR3 Human protein_coding chr2:242031648 chr2:242031643 . . 0 hm6A_associated_SNPs_5266 0 0 0 1 242031634 242031655 mRNA hsa-miR-132 SNED1 miRanda miRanda
14034 chr2 242031644 242031644 1 + A G rs541570994 242031648 + 242031628 242031668 41 GTCGACGAGCCATCCTATGGACTAGTTAACACTAAGGTGGA GTCGACGAGCCATCCTGTGGACTAGTTAACACTAAGGTGGA < 41bp 1 0.218917993714742 1 0.995934844017029 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 SNED1 ENSG00000162804 UTR3 Human protein_coding chr2:242031648 chr2:242031644 . . 0 hm6A_associated_SNPs_5267 0 0 0 1 242031634 242031655 mRNA hsa-miR-132 SNED1 miRanda miRanda
14034 chr2 242033394 242033394 1 + C A rs78834190 242033380 + 242033360 242033400 41 TGCTAATGAAACCGGGATGGACTGATCATCTAACCAAGTGC TGCTAATGAAACCGGGATGGACTGATCATCTAACAAAGTGC < 41bp 1 0.290164747628905 1 0.991661608219147 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 SNED1 ENSG00000162804 UTR3 Human protein_coding chr2:242033380 chr2:242033394 . . 0 hm6A_associated_SNPs_5269 0 0 0 1 242033391 242033413 mRNA hsa-miR-216a SNED1 miRanda miRanda
14034 chr2 242122330 242122330 1 + A G rs77561672 242122346 + 242122326 242122366 41 CACTATATCAACAGTCACAAACCCAATGGCAATAAAGGCAC CACTGTATCAACAGTCACAAACCCAATGGCAATAAAGGCAC < 41bp 1 0.22219926972955 1 0.991007566452026 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 PPP1R7 ENSG00000115685 UTR3 Human protein_coding chr2:242122346 chr2:242122330 . . 0 hm6A_associated_SNPs_5273 0 0 1 2 242122324 242122344 mRNA hsa-miR-134 PPP1R7 miRanda miRanda
14034 chr2 242122330 242122330 1 + A G rs77561672 242122346 + 242122326 242122366 41 CACTATATCAACAGTCACAAACCCAATGGCAATAAAGGCAC CACTGTATCAACAGTCACAAACCCAATGGCAATAAAGGCAC < 41bp 1 0.22219926972955 1 0.991007566452026 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 PPP1R7 ENSG00000115685 UTR3 Human protein_coding chr2:242122346 chr2:242122330 . . 0 hm6A_associated_SNPs_5273 0 0 1 2 242122323 242122346 mRNA hsa-miR-758 PPP1R7 miRanda miRanda
14034 chr3 3189193 3189193 1 + T A rs147986219 3189211 + 3189191 3189231 41 GTTTTTCACCAAAGCCAGTGACTCTTTTGGCCTCATTATTC GTATTTCACCAAAGCCAGTGACTCTTTTGGCCTCATTATTC < 41bp 1 0.723754438567386 1 0.973443508148193 experiment 0.552491122865228 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 TRNT1 ENSG00000072756 CDS Human protein_coding chr3:3189211 chr3:3189193 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_5275 0 0 1 1 3189184 3189205 mRNA hsa-miR-9 TRNT1 miRanda miRanda
14034 chr3 3190240 3190240 1 + T C rs12107469 3190228 + 3190208 3190248 41 GAAATAACAGGGTTACCTTAACAATGACTGTCTATGATGTG GAAATAACAGGGTTACCTTAACAATGACTGTCCATGATGTG < 41bp 1 0.541013563891515 1 0.645058274269104 experiment 0.917972872216971 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 TRNT1 ENSG00000072756 UTR3 Human protein_coding chr3:3190228 chr3:3190240 . . 0 hm6A_associated_SNPs_5279 0 0 1 2 3190225 3190245 mRNA hsa-miR-376a TRNT1 miRanda miRanda
14034 chr3 3190240 3190240 1 + T C rs12107469 3190228 + 3190208 3190248 41 GAAATAACAGGGTTACCTTAACAATGACTGTCTATGATGTG GAAATAACAGGGTTACCTTAACAATGACTGTCCATGATGTG < 41bp 1 0.541013563891515 1 0.645058274269104 experiment 0.917972872216971 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 TRNT1 ENSG00000072756 UTR3 Human protein_coding chr3:3190228 chr3:3190240 . . 0 hm6A_associated_SNPs_5279 0 0 1 2 3190224 3190245 mRNA hsa-miR-376b TRNT1 miRanda miRanda
14034 chr3 3190306 3190306 1 + A G rs547246408 3190302 + 3190282 3190322 41 GCTTAAAAAAGAAATAATTGACCAAGTAAGTTTGCATAAAA GCTTAAAAAAGAAATAATTGACCAGGTAAGTTTGCATAAAA < 41bp 1 0.213683892197946 1 0.100066095590591 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 TRNT1 ENSG00000072756 UTR3 Human protein_coding chr3:3190302 chr3:3190306 . . 0 hm6A_associated_SNPs_5281 0 0 1 2 3190286 3190307 mRNA hsa-miR-133a TRNT1 miRanda miRanda
14034 chr3 3190306 3190306 1 + A G rs547246408 3190302 + 3190282 3190322 41 GCTTAAAAAAGAAATAATTGACCAAGTAAGTTTGCATAAAA GCTTAAAAAAGAAATAATTGACCAGGTAAGTTTGCATAAAA < 41bp 1 0.213683892197946 1 0.100066095590591 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 25 TRNT1 ENSG00000072756 UTR3 Human protein_coding chr3:3190302 chr3:3190306 . . 0 hm6A_associated_SNPs_5281 0 0 1 2 3190286 3190307 mRNA hsa-miR-133b TRNT1 miRanda miRanda
14034 chr3 5221295 5221295 1 + T G rs551622386 5221277 + 5221257 5221297 41 GAATGTCAGTCTTTGTTCAAACATCTGTTTGTTCTATCTCC GAATGTCAGTCTTTGTTCAAACATCTGTTTGTTCTATCGCC < 41bp 1 0.519228766472671 1 0.0831713378429413 experiment 0.961542467054658 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 ARL8B ENSG00000233912 ncRNA_intronic Human antisense chr3:5221277 chr3:5221295 . . 0 hm6A_associated_SNPs_5294 0 0 1 2 5221294 5221319 mRNA hsa-miR-15a ARL8B miRanda miRanda
14034 chr3 5221295 5221295 1 + T G rs551622386 5221277 + 5221257 5221297 41 GAATGTCAGTCTTTGTTCAAACATCTGTTTGTTCTATCTCC GAATGTCAGTCTTTGTTCAAACATCTGTTTGTTCTATCGCC < 41bp 1 0.519228766472671 1 0.0831713378429413 experiment 0.961542467054658 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 ARL8B ENSG00000233912 ncRNA_intronic Human antisense chr3:5221277 chr3:5221295 . . 0 hm6A_associated_SNPs_5294 0 0 1 2 5221294 5221319 mRNA hsa-miR-16 ARL8B miRanda miRanda
14034 chr3 9935263 9935263 1 + A G rs279543 9935260 + 9935240 9935280 41 TGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAACAAAT TGGTTGGCTAGAACTGGGTGACCGACAGCTATGAAACAAAT < 41bp 1 0.521155499899264 1 0.888494074344635 experiment 0.957689000201473 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 JAGN1 ENSG00000171135 UTR3 Human protein_coding chr3:9935260 chr3:9935263 . . 0 hm6A_associated_SNPs_5313 0 0 1 2 9935245 9935268 mRNA hsa-miR-9 JAGN1 miRanda miRanda
14034 chr3 9935263 9935263 1 + A G rs279543 9935260 + 9935240 9935280 41 TGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAACAAAT TGGTTGGCTAGAACTGGGTGACCGACAGCTATGAAACAAAT < 41bp 1 0.521155499899264 1 0.888494074344635 experiment 0.957689000201473 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 JAGN1 ENSG00000171135 UTR3 Human protein_coding chr3:9935260 chr3:9935263 . . 0 hm6A_associated_SNPs_5313 0 0 1 2 9935241 9935265 mRNA hsa-miR-1271 JAGN1 miRanda miRanda
14034 chr3 9935263 9935263 1 + A G rs279543 9935275 + 9935255 9935295 41 GGGTGACCAACAGCTATGAAACAAATTTCAGCTGTTTGAAG GGGTGACCGACAGCTATGAAACAAATTTCAGCTGTTTGAAG < 41bp 1 0.702459200177574 1 0.797447443008423 experiment 0.595081599644851 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 JAGN1 ENSG00000171135 UTR3 Human protein_coding chr3:9935275 chr3:9935263 . . 0 hm6A_associated_SNPs_5314 0 0 1 2 9935245 9935268 mRNA hsa-miR-9 JAGN1 miRanda miRanda
14034 chr3 9935263 9935263 1 + A G rs279543 9935275 + 9935255 9935295 41 GGGTGACCAACAGCTATGAAACAAATTTCAGCTGTTTGAAG GGGTGACCGACAGCTATGAAACAAATTTCAGCTGTTTGAAG < 41bp 1 0.702459200177574 1 0.797447443008423 experiment 0.595081599644851 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 JAGN1 ENSG00000171135 UTR3 Human protein_coding chr3:9935275 chr3:9935263 . . 0 hm6A_associated_SNPs_5314 0 0 1 2 9935241 9935265 mRNA hsa-miR-1271 JAGN1 miRanda miRanda
14034 chr3 10168375 10168375 1 + C A rs190197748 10168364 + 10168344 10168384 41 CCTTTGCACTGCTTCTGTGAACAGTCTTTGTCTCCTCCCCA CCTTTGCACTGCTTCTGTGAACAGTCTTTGTATCCTCCCCA < 41bp 1 0.530186915191916 1 0.0740298926830292 experiment 0.939626169616168 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 32 BRK1 ENSG00000254999 UTR3 Human protein_coding chr3:10168364 chr3:10168375 . . 0 hm6A_associated_SNPs_5322 0 0 1 1 10168365 10168386 mRNA hsa-miR-491-5p C3orf10 miRanda miRanda
14034 chr3 10192469 10192469 1 + A G rs182781943 10192482 + 10192462 10192502 41 TTTGATTATAGTATTAATGGACAAATAAGTTTTTGCTAAAT TTTGATTGTAGTATTAATGGACAAATAAGTTTTTGCTAAAT < 41bp 1 0.471027149143551 1 0.249729126691818 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192482 chr3:10192469 . . 0 hm6A_associated_SNPs_5331 1 0 1 1 10192463 10192484 mRNA hsa-miR-136 VHL miRanda miRanda
14034 chr3 10192472 10192472 1 + G A rs7629500 10192482 + 10192462 10192502 41 TTTGATTATAGTATTAATGGACAAATAAGTTTTTGCTAAAT TTTGATTATAATATTAATGGACAAATAAGTTTTTGCTAAAT < 41bp 1 0.512398090464355 1 0.307738125324249 experiment 0.97520381907129 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 11 VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192482 chr3:10192472 . . 0 hm6A_associated_SNPs_5332 1 0 1 1 10192463 10192484 mRNA hsa-miR-136 VHL miRanda miRanda
14034 chr3 10321423 10321423 1 + G C rs186131246 10321424 + 10321404 10321444 41 CTGGATAACTCTTCAGTTTGACTGTCACTGTTCTGGTGTCA CTGGATAACTCTTCAGTTTCACTGTCACTGTTCTGGTGTCA Direct Loss 1 0.653534437110268 1 0.159709930419922 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 TATDN2 ENSG00000157014;ENSG00000272410 UTR3 Human other chr3:10321424 chr3:10321423 . . 0 hm6A_associated_SNPs_5336 0 0 1 2 10321415 10321435 mRNA hsa-miR-101 TATDN2 miRanda miRanda
14034 chr3 10321423 10321423 1 + G C rs186131246 10321424 + 10321404 10321444 41 CTGGATAACTCTTCAGTTTGACTGTCACTGTTCTGGTGTCA CTGGATAACTCTTCAGTTTCACTGTCACTGTTCTGGTGTCA Direct Loss 1 0.653534437110268 1 0.159709930419922 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 TATDN2 ENSG00000157014;ENSG00000272410 UTR3 Human other chr3:10321424 chr3:10321423 . . 0 hm6A_associated_SNPs_5336 0 0 1 2 10321414 10321432 mRNA hsa-miR-542-3p TATDN2 miRanda miRanda
14034 chr3 10322620 10322620 1 + A G rs533884318 10322636 + 10322616 10322656 41 GAGGAGGAAAAGCGGAGATGACATGGAAGTCTCCAAGCCTG GAGGGGGAAAAGCGGAGATGACATGGAAGTCTCCAAGCCTG < 41bp 1 0.521284668511292 1 0.852652192115784 experiment 0.957430662977416 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 TATDN2 ENSG00000157014 UTR3 Human protein_coding chr3:10322636 chr3:10322620 . . 0 hm6A_associated_SNPs_5340 0 0 1 2 10322611 10322632 mRNA hsa-miR-204 TATDN2 miRanda miRanda
14034 chr3 10322620 10322620 1 + A G rs533884318 10322636 + 10322616 10322656 41 GAGGAGGAAAAGCGGAGATGACATGGAAGTCTCCAAGCCTG GAGGGGGAAAAGCGGAGATGACATGGAAGTCTCCAAGCCTG < 41bp 1 0.521284668511292 1 0.852652192115784 experiment 0.957430662977416 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 TATDN2 ENSG00000157014 UTR3 Human protein_coding chr3:10322636 chr3:10322620 . . 0 hm6A_associated_SNPs_5340 0 0 1 2 10322611 10322632 mRNA hsa-miR-211 TATDN2 miRanda miRanda
14034 chr3 10334478 10334478 1 + C A rs61084491 10334481 + 10334461 10334501 41 CCCCAAACAGAAAAATCCTAACTGTGGTGACCAGGTACCTC CCCCAAACAGAAAAATCATAACTGTGGTGACCAGGTACCTC < 41bp 1 0.0976833063841861 1 0.957960486412048 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 18 GHRLOS ENSG00000240288 ncRNA_exonic Human antisense chr3:10334481 chr3:10334478 . . 0 hm6A_associated_SNPs_5343 0 0 1 1 10334470 10334491 mRNA hsa-miR-197 GHRLOS miRanda miRanda
14034 chr3 11598715 11598715 1 + T C rs543804662 11598732 + 11598712 11598752 41 AAATAATAAATGCAGTAATAACAGTATAAAGTCAGAGGAAT AAACAATAAATGCAGTAATAACAGTATAAAGTCAGAGGAAT < 41bp 1 0.175489750003749 1 0.0732949674129486 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control 4 ATG7;VGLL4 ENSG00000144560;ENSG00000197548 UTR3 Human other chr3:11598732 chr3:11598715 . . 0 hm6A_associated_SNPs_5349 0 0 0 2 11598706 11598728 mRNA hsa-miR-217 ATG7 miRanda miRanda
14034 chr3 11598715 11598715 1 + T C rs543804662 11598732 + 11598712 11598752 41 AAATAATAAATGCAGTAATAACAGTATAAAGTCAGAGGAAT AAACAATAAATGCAGTAATAACAGTATAAAGTCAGAGGAAT < 41bp 1 0.175489750003749 1 0.0732949674129486 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control 4 ATG7;VGLL4 ENSG00000144560;ENSG00000197548 UTR3 Human other chr3:11598732 chr3:11598715 . . 0 hm6A_associated_SNPs_5349 0 0 0 2 11598694 11598717 mRNA hsa-miR-137 ATG7 miRanda miRanda
14034 chr3 14184219 14184219 1 + T C rs79741000 14184233 + 14184213 14184253 41 TTACAATGGATGCTTTTGAAACAAGTATCAGCAAAAGGATT TTACAACGGATGCTTTTGAAACAAGTATCAGCAAAAGGATT < 41bp 1 0.680491094112055 1 0.937139093875885 experiment 0.639017811775891 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 TMEM43 ENSG00000170876 UTR3 Human protein_coding chr3:14184233 chr3:14184219 . . 0 hm6A_associated_SNPs_5362 2 0 1 2 14184199 14184227 mRNA hsa-miR-29b TMEM43 miRanda miRanda
14034 chr3 14184219 14184219 1 + T C rs79741000 14184233 + 14184213 14184253 41 TTACAATGGATGCTTTTGAAACAAGTATCAGCAAAAGGATT TTACAACGGATGCTTTTGAAACAAGTATCAGCAAAAGGATT < 41bp 1 0.680491094112055 1 0.937139093875885 experiment 0.639017811775891 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 TMEM43 ENSG00000170876 UTR3 Human protein_coding chr3:14184233 chr3:14184219 . . 0 hm6A_associated_SNPs_5362 2 0 1 2 14184205 14184227 mRNA hsa-miR-29c TMEM43 miRanda miRanda
14034 chr3 14712721 14712721 1 + T C rs17040093 14712719 + 14712699 14712739 41 TGATCTTTCAAAGCACGCTGACTTGGGTTTGTACTTTGACA TGATCTTTCAAAGCACGCTGACCTGGGTTTGTACTTTGACA < 41bp 1 0.782427340164089 1 0.651609063148499 experiment 0.435145319671821 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 CCDC174 ENSG00000154781 UTR3 Human protein_coding chr3:14712719 chr3:14712721 . . 0 hm6A_associated_SNPs_5371 0 0 1 1 14712713 14712738 mRNA hsa-miR-26a C3orf19 miRanda miRanda
14034 chr3 15090244 15090244 1 - G A rs185962062 15090228 - 15090208 15090248 41 TTTACAAGATAATCCGTAGAACAGAGAGACTGTAGAAAAAT TTTATAAGATAATCCGTAGAACAGAGAGACTGTAGAAAAAT < 41bp 1 0.456908138605524 1 0.256717473268509 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 5 MRPS25;NR2C2 ENSG00000131368 UTR3 Human protein_coding chr3:15090228 chr3:15090244 . . 0 hm6A_associated_SNPs_5378 0 0 1 1 15090233 15090254 mRNA hsa-miR-876-5p MRPS25 miRanda miRanda
14034 chr3 15297340 15297340 1 - G A rs528628971 15297353 - 15297333 15297373 41 AGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG AGGTTCACAGCCTTTGTGGAACATTCCGTATAATGGCATTG < 41bp 1 0.444397899133581 1 0.429671764373779 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 SH3BP5-AS1 ENSG00000224660 ncRNA_exonic Human antisense chr3:15297353 chr3:15297340 . . 0 hm6A_associated_SNPs_5381 0 0 1 1 15297321 15297343 mRNA hsa-miR-137 SH3BP5 miRanda miRanda
14034 chr3 16269634 16269634 1 + A T rs6777322 16269646 + 16269626 16269666 41 TTCAAGAGATCTAGGAAAAGACATTTTCATGTTAATGAGAA TTCAAGAGTTCTAGGAAAAGACATTTTCATGTTAATGAGAA < 41bp 1 0.255805072549298 1 0.212498307228088 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 9 GALNT15 ENSG00000255701 ncRNA_exonic Human other chr3:16269646 chr3:16269634 . . 0 hm6A_associated_SNPs_5407 0 0 0 1 16269625 16269643 mRNA hsa-miR-384 GALNTL2 miRanda miRanda
14034 chr3 19992405 19992405 1 + C T rs111819761 19992389 + 19992369 19992409 41 GGGACTTATTTCAAATTTGGACATGGCTAGTCGAGGCGCAA GGGACTTATTTCAAATTTGGACATGGCTAGTCGAGGTGCAA < 41bp 1 0.758968854938352 1 0.920468032360077 experiment 0.482062290123295 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 37 RAB5A ENSG00000144566 CDS Human protein_coding chr3:19992389 chr3:19992405 synonymous SNV . 0 hm6A_associated_SNPs_5412 0 0 1 1 19992390 19992413 mRNA hsa-miR-375 RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026392 20026413 mRNA hsa-miR-25 RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026392 20026413 mRNA hsa-miR-32 RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026392 20026413 mRNA hsa-miR-92a RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026392 20026414 mRNA hsa-miR-137 RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026392 20026413 mRNA hsa-miR-363 RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026392 20026413 mRNA hsa-miR-367 RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026408 20026430 mRNA hsa-miR-382 RAB5A miRanda miRanda
14034 chr3 20026409 20026409 1 + C G rs8682 20026422 + 20026402 20026442 41 AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT AGTATTGGAATATGTTAGTAACAATCTTGCAGCCTTCCTTT < 41bp 1 0.660512034770025 1 0.0176203548908234 experiment 0.678975930459951 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 RAB5A ENSG00000144566 UTR3 Human protein_coding chr3:20026422 chr3:20026409 . . 0 hm6A_associated_SNPs_5416 0 0 1 8 20026392 20026413 mRNA hsa-miR-92b RAB5A miRanda miRanda
14034 chr3 23631917 23631917 1 + G A rs77732326 23631937 + 23631917 23631957 41 GCAGAAGACTGTTGGATTGAACAAAATAATATGTATTTTGA ACAGAAGACTGTTGGATTGAACAAAATAATATGTATTTTGA < 41bp 1 0.638431587659913 1 0.588211715221405 experiment 0.723136824680174 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 MIR548AC ENSG00000182247 UTR3 Human protein_coding chr3:23631937 chr3:23631917 . . 0 hm6A_associated_SNPs_5418 0 0 1 3 23631910 23631930 mRNA hsa-miR-212 UBE2E2 miRanda miRanda
14034 chr3 23631917 23631917 1 + G A rs77732326 23631937 + 23631917 23631957 41 GCAGAAGACTGTTGGATTGAACAAAATAATATGTATTTTGA ACAGAAGACTGTTGGATTGAACAAAATAATATGTATTTTGA < 41bp 1 0.638431587659913 1 0.588211715221405 experiment 0.723136824680174 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 MIR548AC ENSG00000182247 UTR3 Human protein_coding chr3:23631937 chr3:23631917 . . 0 hm6A_associated_SNPs_5418 0 0 1 3 23631909 23631930 mRNA hsa-miR-132 UBE2E2 miRanda miRanda
14034 chr3 23631917 23631917 1 + G A rs77732326 23631937 + 23631917 23631957 41 GCAGAAGACTGTTGGATTGAACAAAATAATATGTATTTTGA ACAGAAGACTGTTGGATTGAACAAAATAATATGTATTTTGA < 41bp 1 0.638431587659913 1 0.588211715221405 experiment 0.723136824680174 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 MIR548AC ENSG00000182247 UTR3 Human protein_coding chr3:23631937 chr3:23631917 . . 0 hm6A_associated_SNPs_5418 0 0 1 3 23631911 23631932 mRNA hsa-miR-421 UBE2E2 miRanda miRanda
14034 chr3 23962118 23962118 1 + G T rs555873785 23962119 + 23962099 23962139 41 TTTAAATTCTGACTTTGCTGACTTAATTTAAATGCTCGTTC TTTAAATTCTGACTTTGCTTACTTAATTTAAATGCTCGTTC Direct Loss 1 0.0442320626877566 1 0.00928601622581482 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 20 RPL15 ENSG00000174748 UTR3 Human protein_coding chr3:23962119 chr3:23962118 . . 0 hm6A_associated_SNPs_5426 0 0 1 2 23962099 23962122 mRNA hsa-miR-15b RPL15 miRanda miRanda
14034 chr3 23962118 23962118 1 + G T rs555873785 23962119 + 23962099 23962139 41 TTTAAATTCTGACTTTGCTGACTTAATTTAAATGCTCGTTC TTTAAATTCTGACTTTGCTTACTTAATTTAAATGCTCGTTC Direct Loss 1 0.0442320626877566 1 0.00928601622581482 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 20 RPL15 ENSG00000174748 UTR3 Human protein_coding chr3:23962119 chr3:23962118 . . 0 hm6A_associated_SNPs_5426 0 0 1 2 23962099 23962122 mRNA hsa-miR-424 RPL15 miRanda miRanda
14034 chr3 24020251 24020251 1 + G A rs148098215 24020243 + 24020223 24020263 41 CACTTCTTTTTTCCTAAATAACACTACAGGGATTTTGTCAT CACTTCTTTTTTCCTAAATAACACTACAAGGATTTTGTCAT < 41bp 1 0.293780191125091 1 0.197378695011139 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 NR1D2 ENSG00000174738 UTR3 Human protein_coding chr3:24020243 chr3:24020251 . . 0 hm6A_associated_SNPs_5429 0 0 1 1 24020242 24020264 mRNA hsa-miR-425 NR1D2 miRanda miRanda
14034 chr3 24020947 24020947 1 + C G rs375847872 24020954 + 24020934 24020974 41 TTTGCATAAGCCTCTTTATAACATGTATCTTTAAAACAATT TTTGCATAAGCCTGTTTATAACATGTATCTTTAAAACAATT < 41bp 1 0.16477903523757 1 0.127130299806595 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 NR1D2 ENSG00000174738 UTR3 Human protein_coding chr3:24020954 chr3:24020947 . . 0 hm6A_associated_SNPs_5430 0 0 1 1 24020933 24020954 mRNA hsa-miR-340 NR1D2 miRanda miRanda
14034 chr3 24021864 24021864 1 + C T rs71324123 24021877 + 24021857 24021897 41 TAGGAAACTGTTACCTATAAACAAAGATTGACTGGATTCGA TAGGAAATTGTTACCTATAAACAAAGATTGACTGGATTCGA < 41bp 1 0.408023554199351 1 0.829944789409637 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 NR1D2 ENSG00000174738 UTR3 Human protein_coding chr3:24021877 chr3:24021864 . . 0 hm6A_associated_SNPs_5432 0 0 1 1 24021850 24021871 mRNA hsa-miR-194 NR1D2 miRanda miRanda
14034 chr3 24021936 24021936 1 + T C rs79977932 24021933 + 24021913 24021953 41 TTGAAGCTATTCTGGAACTAACATGGAAAAATGAAATGGCT TTGAAGCTATTCTGGAACTAACACGGAAAAATGAAATGGCT < 41bp 1 0.398779869876974 1 0.722087383270264 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 NR1D2 ENSG00000174738 UTR3 Human protein_coding chr3:24021933 chr3:24021936 . . 0 hm6A_associated_SNPs_5434 0 0 1 1 24021916 24021940 mRNA hsa-miR-145 NR1D2 miRanda miRanda
14034 chr3 28361171 28361171 1 + T G rs138266251 28361190 + 28361170 28361210 41 TTATAGTCCTTAAATAATGGACTCAAGCATATATGTTTGCT TGATAGTCCTTAAATAATGGACTCAAGCATATATGTTTGCT < 41bp 1 0.415065734637539 1 0.971641600131989 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 CMC1 ENSG00000187118 UTR3 Human protein_coding chr3:28361190 chr3:28361171 . . 0 hm6A_associated_SNPs_5441 0 0 1 1 28361160 28361182 mRNA hsa-miR-499-5p CMC1 miRanda miRanda
14034 chr3 32207808 32207808 1 + C G rs78129605 32207816 + 32207796 32207836 41 TTAAATTTTAACCAGCATTAACATGGTAGAGTGGAGGAGTG TTAAATTTTAACGAGCATTAACATGGTAGAGTGGAGGAGTG < 41bp 1 0.206206663581929 1 0.015809029340744 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 GPD1L ENSG00000152642 UTR3 Human protein_coding chr3:32207816 chr3:32207808 . . 0 hm6A_associated_SNPs_5448 1 0 1 1 32207794 32207816 mRNA hsa-miR-155 GPD1L miRanda miRanda
14034 chr3 32209150 32209150 1 + C T rs113069721 32209162 + 32209142 32209182 41 ACTTGATACGTGTTAAATGAACATATGAATGTAATTTATAT ACTTGATATGTGTTAAATGAACATATGAATGTAATTTATAT < 41bp 1 0.0978357112912255 1 0.049274206161499 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 9 GPD1L ENSG00000152642 UTR3 Human protein_coding chr3:32209162 chr3:32209150 . . 0 hm6A_associated_SNPs_5450 0 0 1 1 32209132 32209155 mRNA hsa-miR-144 GPD1L miRanda miRanda
14034 chr3 32411696 32411696 1 + A C rs17029321 32411708 + 32411688 32411728 41 CATAGATCATATTTTCTTAGACAATGTTTAAATAGATAAAT CATAGATCCTATTTTCTTAGACAATGTTTAAATAGATAAAT < 41bp 1 0.397755227609073 1 0.0391938388347626 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 CMTM8 ENSG00000170293 UTR3 Human protein_coding chr3:32411708 chr3:32411696 . . 0 hm6A_associated_SNPs_5453 0 0 1 5 32411695 32411714 mRNA hsa-miR-219-5p CMTM8 miRanda miRanda
14034 chr3 32411696 32411696 1 + A C rs17029321 32411708 + 32411688 32411728 41 CATAGATCATATTTTCTTAGACAATGTTTAAATAGATAAAT CATAGATCCTATTTTCTTAGACAATGTTTAAATAGATAAAT < 41bp 1 0.397755227609073 1 0.0391938388347626 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 CMTM8 ENSG00000170293 UTR3 Human protein_coding chr3:32411708 chr3:32411696 . . 0 hm6A_associated_SNPs_5453 0 0 1 5 32411694 32411716 mRNA hsa-miR-141 CMTM8 miRanda miRanda
14034 chr3 32411696 32411696 1 + A C rs17029321 32411708 + 32411688 32411728 41 CATAGATCATATTTTCTTAGACAATGTTTAAATAGATAAAT CATAGATCCTATTTTCTTAGACAATGTTTAAATAGATAAAT < 41bp 1 0.397755227609073 1 0.0391938388347626 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 CMTM8 ENSG00000170293 UTR3 Human protein_coding chr3:32411708 chr3:32411696 . . 0 hm6A_associated_SNPs_5453 0 0 1 5 32411696 32411716 mRNA hsa-miR-200a CMTM8 miRanda miRanda
14034 chr3 32411696 32411696 1 + A C rs17029321 32411708 + 32411688 32411728 41 CATAGATCATATTTTCTTAGACAATGTTTAAATAGATAAAT CATAGATCCTATTTTCTTAGACAATGTTTAAATAGATAAAT < 41bp 1 0.397755227609073 1 0.0391938388347626 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 CMTM8 ENSG00000170293 UTR3 Human protein_coding chr3:32411708 chr3:32411696 . . 0 hm6A_associated_SNPs_5453 0 0 1 5 32411696 32411718 mRNA hsa-miR-494 CMTM8 miRanda miRanda
14034 chr3 32411696 32411696 1 + A C rs17029321 32411708 + 32411688 32411728 41 CATAGATCATATTTTCTTAGACAATGTTTAAATAGATAAAT CATAGATCCTATTTTCTTAGACAATGTTTAAATAGATAAAT < 41bp 1 0.397755227609073 1 0.0391938388347626 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 CMTM8 ENSG00000170293 UTR3 Human protein_coding chr3:32411708 chr3:32411696 . . 0 hm6A_associated_SNPs_5453 0 0 1 5 32411695 32411716 mRNA hsa-miR-543 CMTM8 miRanda miRanda
14034 chr3 33183947 33183947 1 + G A rs145383822 33183959 + 33183939 33183979 41 AGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGA AGCCCACAACAACCAAAGAGACTTCCTCTTGGCGTTCAGGA < 41bp 1 0.75535380277805 1 0.973180890083313 experiment 0.4892923944439 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 CRTAP ENSG00000170275 UTR3 Human protein_coding chr3:33183959 chr3:33183947 . . 0 hm6A_associated_SNPs_5455 0 0 1 1 33183941 33183957 mRNA hsa-miR-9 CRTAP miRanda miRanda
14034 chr3 37408191 37408191 1 + G A rs115578020 37408211 + 37408191 37408231 41 GGCAGTGTCATCTCTGAGAAACAGATAAATAAAGTTTATTT AGCAGTGTCATCTCTGAGAAACAGATAAATAAAGTTTATTT < 41bp 1 0.0666736556129485 1 0.00655087828636169 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 GOLGA4 ENSG00000144674 UTR3 Human protein_coding chr3:37408211 chr3:37408191 . . 0 hm6A_associated_SNPs_5473 0 0 1 2 37408186 37408205 mRNA hsa-miR-143 GOLGA4 miRanda miRanda
14034 chr3 37408191 37408191 1 + G A rs115578020 37408211 + 37408191 37408231 41 GGCAGTGTCATCTCTGAGAAACAGATAAATAAAGTTTATTT AGCAGTGTCATCTCTGAGAAACAGATAAATAAAGTTTATTT < 41bp 1 0.0666736556129485 1 0.00655087828636169 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 GOLGA4 ENSG00000144674 UTR3 Human protein_coding chr3:37408211 chr3:37408191 . . 0 hm6A_associated_SNPs_5473 0 0 1 2 37408180 37408202 mRNA hsa-miR-425 GOLGA4 miRanda miRanda
14034 chr3 37408216 37408216 1 + T A rs116813806 37408211 + 37408191 37408231 41 GGCAGTGTCATCTCTGAGAAACAGATAAATAAAGTTTATTT GGCAGTGTCATCTCTGAGAAACAGAAAAATAAAGTTTATTT < 41bp 1 0.0781109457145733 1 0.0109531581401825 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 GOLGA4 ENSG00000144674 UTR3 Human protein_coding chr3:37408211 chr3:37408216 . . 0 hm6A_associated_SNPs_5474 0 0 1 1 37408213 37408234 mRNA hsa-miR-30e GOLGA4 miRanda miRanda
14034 chr3 38456275 38456275 1 + C A rs554014470 38456279 + 38456259 38456299 41 GAAAAGCTAAGAGAAGCAAAACAAACAAAGCAATATTAAAG GAAAAGCTAAGAGAAGAAAAACAAACAAAGCAATATTAAAG < 41bp 1 0.0288029397053647 1 0.12833845615387 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 17 XYLB ENSG00000093217 UTR3 Human protein_coding chr3:38456279 chr3:38456275 . . 0 hm6A_associated_SNPs_5486 0 0 1 1 38456272 38456294 mRNA hsa-miR-137 XYLB miRanda miRanda
14034 chr3 38565753 38565753 1 + A G rs146039478 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATGCAGGGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.791173304466919 1 0.98753297328949 experiment 0.417653391066163 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 14 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565753 nonsynonymous SNV 0.295 0 hm6A_associated_SNPs_5489 0 0 1 3 38565732 38565754 mRNA hsa-miR-217 EXOG miRanda miRanda
14034 chr3 38565753 38565753 1 + A G rs146039478 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATGCAGGGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.791173304466919 1 0.98753297328949 experiment 0.417653391066163 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 14 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565753 nonsynonymous SNV 0.295 0 hm6A_associated_SNPs_5489 0 0 1 3 38565736 38565755 mRNA hsa-miR-544 EXOG miRanda miRanda
14034 chr3 38565753 38565753 1 + A G rs146039478 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATGCAGGGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.791173304466919 1 0.98753297328949 experiment 0.417653391066163 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 14 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565753 nonsynonymous SNV 0.295 0 hm6A_associated_SNPs_5489 0 0 1 3 38565737 38565758 mRNA hsa-miR-216b EXOG miRanda miRanda
14034 chr3 39135548 39135548 1 + C T rs181850993 39135539 + 39135519 39135559 41 TTGGCAGAGGAGAAAATTGAACTTTTGTGCCAGGACCAGGT TTGGCAGAGGAGAAAATTGAACTTTTGTGTCAGGACCAGGT < 41bp 1 0.200415972291419 1 0.968588769435883 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 WDR48 ENSG00000114742 CDS Human protein_coding chr3:39135539 chr3:39135548 synonymous SNV . 0 hm6A_associated_SNPs_5493 0 0 1 1 39135540 39135557 mRNA hsa-miR-490-3p WDR48 miRanda miRanda
14034 chr3 39135551 39135551 1 + G A rs17852414 39135539 + 39135519 39135559 41 TTGGCAGAGGAGAAAATTGAACTTTTGTGCCAGGACCAGGT TTGGCAGAGGAGAAAATTGAACTTTTGTGCCAAGACCAGGT < 41bp 1 0.227967111557301 1 0.978627920150757 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 WDR48 ENSG00000114742 CDS Human protein_coding chr3:39135539 chr3:39135551 synonymous SNV . 0 hm6A_associated_SNPs_5494 0 0 1 1 39135540 39135557 mRNA hsa-miR-490-3p WDR48 miRanda miRanda
14034 chr3 39136472 39136472 1 + G A rs115828848 39136473 + 39136453 39136493 41 AGCAGAAGAGCCCCAAGCAGACTATGTCTTTCAAGATGTAC AGCAGAAGAGCCCCAAGCAAACTATGTCTTTCAAGATGTAC < 41bp 1 0.570973990217334 1 0.992899954319 experiment 0.858052019565332 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39136473 chr3:39136472 . . 0 hm6A_associated_SNPs_5495 0 0 1 1 39136462 39136484 mRNA hsa-miR-186 WDR48 miRanda miRanda
14034 chr3 39137243 39137243 1 + A G rs568431045 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA GTCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA < 41bp 1 0.578434274736131 1 0.169867396354675 experiment 0.843131450527737 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137243 . . 0 hm6A_associated_SNPs_5498 0 0 1 3 39137240 39137260 mRNA hsa-miR-212 WDR48 miRanda miRanda
14034 chr3 39137243 39137243 1 + A G rs568431045 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA GTCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA < 41bp 1 0.578434274736131 1 0.169867396354675 experiment 0.843131450527737 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137243 . . 0 hm6A_associated_SNPs_5498 0 0 1 3 39137240 39137260 mRNA hsa-miR-128 WDR48 miRanda miRanda
14034 chr3 39137243 39137243 1 + A G rs568431045 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA GTCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA < 41bp 1 0.578434274736131 1 0.169867396354675 experiment 0.843131450527737 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137243 . . 0 hm6A_associated_SNPs_5498 0 0 1 3 39137239 39137260 mRNA hsa-miR-132 WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137256 39137278 mRNA hsa-miR-17 WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137256 39137278 mRNA hsa-miR-20a WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137256 39137278 mRNA hsa-miR-93 WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137256 39137278 mRNA hsa-miR-106a WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137258 39137278 mRNA hsa-miR-106b WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137256 39137278 mRNA hsa-miR-20b WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137258 39137280 mRNA hsa-miR-488 WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137263 + 39137243 39137283 41 ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTCATAGA ATCTTCTTTTCACTGTTCTAACAATCTAACACTTTAATAGA < 41bp 1 0.574989324432757 1 0.24241903424263 experiment 0.850021351134486 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 36 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137263 chr3:39137278 . . 0 hm6A_associated_SNPs_5499 0 0 1 8 39137257 39137278 mRNA hsa-miR-519d WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137256 39137278 mRNA hsa-miR-17 WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137256 39137278 mRNA hsa-miR-20a WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137256 39137278 mRNA hsa-miR-93 WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137256 39137278 mRNA hsa-miR-106a WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137258 39137278 mRNA hsa-miR-106b WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137256 39137278 mRNA hsa-miR-20b WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137258 39137280 mRNA hsa-miR-488 WDR48 miRanda miRanda
14034 chr3 39137278 39137278 1 + C A rs1053489 39137271 + 39137251 39137291 41 TTCACTGTTCTAACAATCTAACACTTTCATAGAATCATTTG TTCACTGTTCTAACAATCTAACACTTTAATAGAATCATTTG < 41bp 1 0.524073576138353 1 0.275875568389893 experiment 0.951852847723294 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137271 chr3:39137278 . . 0 hm6A_associated_SNPs_5500 0 0 1 8 39137257 39137278 mRNA hsa-miR-519d WDR48 miRanda miRanda
14034 chr3 39438560 39438560 1 + G A rs189387075 39438562 + 39438542 39438582 41 CAGAGGCTCTGGAGAACGGGACAGTGGCTTTCTAGCCTCTG CAGAGGCTCTGGAGAACGAGACAGTGGCTTTCTAGCCTCTG < 41bp 1 0.719986299822516 1 0.62570458650589 experiment 0.560027400354969 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 SLC25A38 ENSG00000144659 UTR3 Human protein_coding chr3:39438562 chr3:39438560 . . 0 hm6A_associated_SNPs_5506 0 0 1 3 39438558 39438581 mRNA hsa-let-7b SLC25A38 miRanda miRanda
14034 chr3 39438560 39438560 1 + G A rs189387075 39438562 + 39438542 39438582 41 CAGAGGCTCTGGAGAACGGGACAGTGGCTTTCTAGCCTCTG CAGAGGCTCTGGAGAACGAGACAGTGGCTTTCTAGCCTCTG < 41bp 1 0.719986299822516 1 0.62570458650589 experiment 0.560027400354969 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 SLC25A38 ENSG00000144659 UTR3 Human protein_coding chr3:39438562 chr3:39438560 . . 0 hm6A_associated_SNPs_5506 0 0 1 3 39438559 39438581 mRNA hsa-let-7d SLC25A38 miRanda miRanda
14034 chr3 39438560 39438560 1 + G A rs189387075 39438562 + 39438542 39438582 41 CAGAGGCTCTGGAGAACGGGACAGTGGCTTTCTAGCCTCTG CAGAGGCTCTGGAGAACGAGACAGTGGCTTTCTAGCCTCTG < 41bp 1 0.719986299822516 1 0.62570458650589 experiment 0.560027400354969 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 SLC25A38 ENSG00000144659 UTR3 Human protein_coding chr3:39438562 chr3:39438560 . . 0 hm6A_associated_SNPs_5506 0 0 1 3 39438559 39438581 mRNA hsa-let-7e SLC25A38 miRanda miRanda
14034 chr3 39556193 39556193 1 + A G rs816493 39556204 + 39556184 39556224 41 CTGAACCCAATTATGATGGGACAGGGTTGGGCATTGACTTC CTGAACCCAGTTATGATGGGACAGGGTTGGGCATTGACTTC < 41bp 1 0.0744828893322003 1 0.000247567892074585 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 10 MOBP ENSG00000168314 UTR3 Human protein_coding chr3:39556204 chr3:39556193 . . 0 hm6A_associated_SNPs_5508 0 0 0 1 39556187 39556210 mRNA hsa-miR-339-5p MOBP miRanda miRanda
14034 chr3 39556209 39556209 1 + G A rs78358313 39556204 + 39556184 39556224 41 CTGAACCCAATTATGATGGGACAGGGTTGGGCATTGACTTC CTGAACCCAATTATGATGGGACAGGATTGGGCATTGACTTC < 41bp 1 0.0864803607515592 1 0.000824809074401855 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 MOBP ENSG00000168314 UTR3 Human protein_coding chr3:39556204 chr3:39556209 . . 0 hm6A_associated_SNPs_5509 0 0 0 2 39556203 39556219 mRNA hsa-miR-365 MOBP miRanda miRanda
14034 chr3 39556209 39556209 1 + G A rs78358313 39556204 + 39556184 39556224 41 CTGAACCCAATTATGATGGGACAGGGTTGGGCATTGACTTC CTGAACCCAATTATGATGGGACAGGATTGGGCATTGACTTC < 41bp 1 0.0864803607515592 1 0.000824809074401855 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 MOBP ENSG00000168314 UTR3 Human protein_coding chr3:39556204 chr3:39556209 . . 0 hm6A_associated_SNPs_5509 0 0 0 2 39556187 39556210 mRNA hsa-miR-339-5p MOBP miRanda miRanda
14034 chr3 40353582 40353582 1 + T G rs11541151 40353598 + 40353578 40353618 41 TGATTCCCTGCAGTAAACGGACTTTTCATTTATTTAATCAT TGATGCCCTGCAGTAAACGGACTTTTCATTTATTTAATCAT < 41bp 1 0.787139311701411 1 0.851719915866852 experiment 0.425721376597178 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 EIF1B ENSG00000114784 UTR3 Human protein_coding chr3:40353598 chr3:40353582 . . 0 hm6A_associated_SNPs_5511 0 0 1 1 40353573 40353592 mRNA hsa-miR-217 EIF1B miRanda miRanda
14034 chr3 40503848 40503848 1 + A G rs545919871 40503846 + 40503826 40503866 41 TGATAGTAGGATTATAATAAACATTAAATAATCAGTTCCTT TGATAGTAGGATTATAATAAACGTTAAATAATCAGTTCCTT Direct Loss 1 0.0751463499177412 1 0.135093837976456 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 RPL14 ENSG00000188846 UTR3 Human protein_coding chr3:40503846 chr3:40503848 . . 0 hm6A_associated_SNPs_5512 0 0 1 2 40503830 40503852 mRNA hsa-miR-155 RPL14 miRanda miRanda
14034 chr3 40503848 40503848 1 + A G rs545919871 40503846 + 40503826 40503866 41 TGATAGTAGGATTATAATAAACATTAAATAATCAGTTCCTT TGATAGTAGGATTATAATAAACGTTAAATAATCAGTTCCTT Direct Loss 1 0.0751463499177412 1 0.135093837976456 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 RPL14 ENSG00000188846 UTR3 Human protein_coding chr3:40503846 chr3:40503848 . . 0 hm6A_associated_SNPs_5512 0 0 1 2 40503831 40503851 mRNA hsa-miR-590-3p RPL14 miRanda miRanda
14034 chr3 42578509 42578509 1 + G A rs342511 42578511 + 42578491 42578531 41 CAGCGAATGCTAGGTCTCGGACTAAGCCTACCTGCTCTCCA CAGCGAATGCTAGGTCTCAGACTAAGCCTACCTGCTCTCCA < 41bp 1 0.142472719893339 1 0.922947466373444 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 VIPR1 ENSG00000114812 UTR3 Human protein_coding chr3:42578511 chr3:42578509 . . 0 hm6A_associated_SNPs_5526 0 0 0 1 42578489 42578511 mRNA hsa-miR-615-3p VIPR1 miRanda miRanda
14034 chr3 42578743 42578743 1 + C G rs117754996 42578735 + 42578715 42578755 41 GCTACACATACAGGATTTGAACTCAGATCTGTCTGATAGGA GCTACACATACAGGATTTGAACTCAGATGTGTCTGATAGGA < 41bp 1 0.12332671124943 1 0.936612248420715 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 VIPR1 ENSG00000114812 UTR3 Human protein_coding chr3:42578735 chr3:42578743 . . 0 hm6A_associated_SNPs_5527 0 0 0 3 42578737 42578762 mRNA hsa-miR-23a VIPR1 miRanda miRanda
14034 chr3 42578743 42578743 1 + C G rs117754996 42578735 + 42578715 42578755 41 GCTACACATACAGGATTTGAACTCAGATCTGTCTGATAGGA GCTACACATACAGGATTTGAACTCAGATGTGTCTGATAGGA < 41bp 1 0.12332671124943 1 0.936612248420715 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 VIPR1 ENSG00000114812 UTR3 Human protein_coding chr3:42578735 chr3:42578743 . . 0 hm6A_associated_SNPs_5527 0 0 0 3 42578742 42578762 mRNA hsa-miR-23b VIPR1 miRanda miRanda
14034 chr3 42578743 42578743 1 + C G rs117754996 42578735 + 42578715 42578755 41 GCTACACATACAGGATTTGAACTCAGATCTGTCTGATAGGA GCTACACATACAGGATTTGAACTCAGATGTGTCTGATAGGA < 41bp 1 0.12332671124943 1 0.936612248420715 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 VIPR1 ENSG00000114812 UTR3 Human protein_coding chr3:42578735 chr3:42578743 . . 0 hm6A_associated_SNPs_5527 0 0 0 3 42578729 42578753 mRNA hsa-miR-361-5p VIPR1 miRanda miRanda
14034 chr3 42636287 42636287 1 + T A rs574606229 42636274 + 42636254 42636294 41 ACTTGGAGCATGTTTGGATAACAAAGACATCACTGGGATGT ACTTGGAGCATGTTTGGATAACAAAGACATCACAGGGATGT < 41bp 1 0.602633514943277 1 0.759410262107849 experiment 0.794732970113445 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 34 SS18L2 ENSG00000008324 UTR3 Human protein_coding chr3:42636274 chr3:42636287 . . 0 hm6A_associated_SNPs_5528 0 0 1 1 42636285 42636306 mRNA hsa-miR-411 SS18L2 miRanda miRanda
14034 chr3 42636287 42636287 1 + T A rs574606229 42636280 + 42636260 42636300 41 AGCATGTTTGGATAACAAAGACATCACTGGGATGTTCAAGT AGCATGTTTGGATAACAAAGACATCACAGGGATGTTCAAGT < 41bp 1 0.691960567412279 1 0.79131817817688 experiment 0.616078865175442 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 SS18L2 ENSG00000008324 UTR3 Human protein_coding chr3:42636280 chr3:42636287 . . 0 hm6A_associated_SNPs_5529 0 0 1 1 42636285 42636306 mRNA hsa-miR-411 SS18L2 miRanda miRanda
14034 chr3 42636364 42636364 1 + C G rs114819777 42636368 + 42636348 42636388 41 AGGAATTGGTGAGATTCCTGACTTGATACCTTGCTAAATGG AGGAATTGGTGAGATTGCTGACTTGATACCTTGCTAAATGG < 41bp 1 0.359859752303241 1 0.825075685977936 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 SS18L2 ENSG00000008324 UTR3 Human protein_coding chr3:42636368 chr3:42636364 . . 0 hm6A_associated_SNPs_5530 0 0 1 2 42636344 42636364 mRNA hsa-miR-216a SS18L2 miRanda miRanda
14034 chr3 42636364 42636364 1 + C G rs114819777 42636368 + 42636348 42636388 41 AGGAATTGGTGAGATTCCTGACTTGATACCTTGCTAAATGG AGGAATTGGTGAGATTGCTGACTTGATACCTTGCTAAATGG < 41bp 1 0.359859752303241 1 0.825075685977936 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 SS18L2 ENSG00000008324 UTR3 Human protein_coding chr3:42636368 chr3:42636364 . . 0 hm6A_associated_SNPs_5530 0 0 1 2 42636347 42636368 mRNA hsa-miR-873 SS18L2 miRanda miRanda
14034 chr3 43391284 43391284 1 + C T rs549763413 43391283 + 43391263 43391303 41 GTGGCATTCTATCTTGTAGGACACTGTATATTGCAAATTGC GTGGCATTCTATCTTGTAGGATACTGTATATTGCAAATTGC Direct Loss 1 0.289668203115402 1 0.062422126531601 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 SNRK-AS1 ENSG00000234617 ncRNA_exonic Human antisense chr3:43391283 chr3:43391284 . . 0 hm6A_associated_SNPs_5545 0 0 1 1 43391278 43391298 mRNA hsa-miR-448 SNRK miRanda miRanda
14034 chr3 43392395 43392395 1 + G C rs552339773 43392410 + 43392390 43392430 41 TATCTGTATTTAAAGATGTGACAATCTTGACACCAATTTTA TATCTCTATTTAAAGATGTGACAATCTTGACACCAATTTTA < 41bp 1 0.387316134024228 1 0.0662938356399536 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 6 SNRK-AS1 ENSG00000234617 ncRNA_intronic Human antisense chr3:43392410 chr3:43392395 . . 0 hm6A_associated_SNPs_5547 0 0 1 1 43392393 43392415 mRNA hsa-miR-32 SNRK miRanda miRanda
14034 chr3 44450735 44450735 1 + T C rs114573423 44450742 + 44450722 44450762 41 AAATTTTGTTTTCTAGTGTAACAAATGTTTCCCATAAGATT AAATTTTGTTTTCCAGTGTAACAAATGTTTCCCATAAGATT < 41bp 1 0.211486674248777 1 0.22129288315773 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 TCAIM ENSG00000179152 UTR3 Human protein_coding chr3:44450742 chr3:44450735 . . 0 hm6A_associated_SNPs_5553 0 0 1 1 44450727 44450753 mRNA hsa-miR-494 C3orf23 miRanda miRanda
14034 chr3 45589485 45589485 1 + A G rs75907288 45589479 + 45589459 45589499 41 CAATGTGCCAGCCACTTGGAACTGCTAACTGAGCCTCCAGA CAATGTGCCAGCCACTTGGAACTGCTGACTGAGCCTCCAGA < 41bp 1 0.754709122569953 1 0.981665253639221 experiment 0.490581754860094 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 LARS2 ENSG00000011376 UTR3 Human protein_coding chr3:45589479 chr3:45589485 . . 0 hm6A_associated_SNPs_5566 0 0 0 1 45589474 45589494 mRNA hsa-miR-24 LARS2 miRanda miRanda
14034 chr3 45589485 45589485 1 + A G rs75907288 45589486 + 45589466 45589506 41 CCAGCCACTTGGAACTGCTAACTGAGCCTCCAGATGGTAGT CCAGCCACTTGGAACTGCTGACTGAGCCTCCAGATGGTAGT < 41bp 1 0.694396824221142 1 0.96600079536438 experiment 0.611206351557716 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 LARS2 ENSG00000011376 UTR3 Human protein_coding chr3:45589486 chr3:45589485 . . 0 hm6A_associated_SNPs_5567 0 0 0 1 45589474 45589494 mRNA hsa-miR-24 LARS2 miRanda miRanda
14034 chr3 45722723 45722723 1 + T C rs189315911 45722708 + 45722688 45722728 41 AAATTATGCAAAGTATTGTGACAAAACTGCATCAATTTGTT AAATTATGCAAAGTATTGTGACAAAACTGCATCAACTTGTT < 41bp 1 0.170607084170985 1 0.051818311214447 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 36 LIMD1-AS1 ENSG00000230530 ncRNA_intronic Human antisense chr3:45722708 chr3:45722723 . . 0 hm6A_associated_SNPs_5578 0 0 1 1 45722708 45722732 mRNA hsa-miR-505 LIMD1 miRanda miRanda
14034 chr3 45722723 45722723 1 + T C rs189315911 45722730 + 45722710 45722750 41 AAAACTGCATCAATTTGTTGACTATTAAAGTGCTCCTTGAA AAAACTGCATCAACTTGTTGACTATTAAAGTGCTCCTTGAA < 41bp 1 0.0874921064756535 1 0.0607349872589111 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 LIMD1-AS1 ENSG00000230530 ncRNA_intronic Human antisense chr3:45722730 chr3:45722723 . . 0 hm6A_associated_SNPs_5579 0 0 1 1 45722708 45722732 mRNA hsa-miR-505 LIMD1 miRanda miRanda
14034 chr3 45785296 45785296 1 + A G rs181892652 45785305 + 45785285 45785325 41 GTGCTCCATGCAGGATGATGACAGAATTGATCTGATGTTAC GTGCTCCATGCGGGATGATGACAGAATTGATCTGATGTTAC < 41bp 1 0.644795654006448 1 0.654379069805145 experiment 0.710408691987104 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SACM1L ENSG00000211456 UTR3 Human protein_coding chr3:45785305 chr3:45785296 . . 0 hm6A_associated_SNPs_5580 0 0 1 1 45785277 45785299 mRNA hsa-miR-370 SACM1L miRanda miRanda
14034 chr3 45786483 45786483 1 + A G rs557305095 45786495 + 45786475 45786515 41 TCATCACTATCTTTTATAAAACATTAATATAAGTCGTTACT TCATCACTGTCTTTTATAAAACATTAATATAAGTCGTTACT < 41bp 1 0.438477562889189 1 0.633827686309814 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SACM1L ENSG00000211456 UTR3 Human protein_coding chr3:45786495 chr3:45786483 . . 0 hm6A_associated_SNPs_5581 0 0 1 1 45786473 45786493 mRNA hsa-miR-340 SACM1L miRanda miRanda
14034 chr3 48312229 48312229 1 + A G rs1045482 48312234 + 48312214 48312254 41 GATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAAT GATGCTAGAGAGGAAGAAGGACTTGGAGAGAGAGAAGGAAT < 41bp 1 0.349966539692306 1 0.874694585800171 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 16 ZNF589 ENSG00000164048 UTR3 Human protein_coding chr3:48312234 chr3:48312229 . . 0 hm6A_associated_SNPs_5608 0 0 1 1 48312221 48312244 mRNA hsa-miR-150 ZNF589 miRanda miRanda
14034 chr3 48312235 48312235 1 + C T rs190320310 48312234 + 48312214 48312254 41 GATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAAT GATGCTAGAGAGGAAAAAGGATTTGGAGAGAGAGAAGGAAT Direct Loss 1 0.379365653690111 1 0.36515998840332 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 ZNF589 ENSG00000164048 UTR3 Human protein_coding chr3:48312234 chr3:48312235 . . 0 hm6A_associated_SNPs_5609 0 0 1 1 48312221 48312244 mRNA hsa-miR-150 ZNF589 miRanda miRanda
14034 chr3 49044498 49044498 1 + A T rs555518775 49044509 + 49044489 49044529 41 ATGTTATTTATTGTGTACTGACTCCATCTGCCCCGTCAAAT ATGTTATTTTTTGTGTACTGACTCCATCTGCCCCGTCAAAT < 41bp 1 0.619929061632618 1 0.948083519935608 experiment 0.760141876734765 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 10 WDR6;P4HTM ENSG00000178252;ENSG00000178467 UTR5;UTR3 Human other chr3:49044509 chr3:49044498 . . 0 hm6A_associated_SNPs_5618 0 0 1 1 49044498 49044521 mRNA hsa-miR-34c-5p P4HTM miRanda miRanda
14034 chr3 49571740 49571740 1 + C T rs79290785 49571732 + 49571712 49571752 41 TGATGCTCTTTCCTCACTTGACCTTGGCCGCTTTGTCCTAA TGATGCTCTTTCCTCACTTGACCTTGGCTGCTTTGTCCTAA < 41bp 1 0.393746170425605 1 0.792381584644318 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 DAG1 ENSG00000173402 UTR3 Human protein_coding chr3:49571732 chr3:49571740 . . 0 hm6A_associated_SNPs_5627 0 0 1 1 49571739 49571761 mRNA hsa-miR-134 DAG1 miRanda miRanda
14034 chr3 49571740 49571740 1 + C T rs79290785 49571752 + 49571732 49571772 41 ACCTTGGCCGCTTTGTCCTAACAGTCCACAGTCCTGCCCCG ACCTTGGCTGCTTTGTCCTAACAGTCCACAGTCCTGCCCCG < 41bp 1 0.640683160902975 1 0.741651833057404 experiment 0.71863367819405 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 DAG1 ENSG00000173402 UTR3 Human protein_coding chr3:49571752 chr3:49571740 . . 0 hm6A_associated_SNPs_5628 0 0 1 1 49571739 49571761 mRNA hsa-miR-134 DAG1 miRanda miRanda
14034 chr3 49720887 49720887 1 + C T rs73834009 49720875 + 49720855 49720895 41 GGAGGCTTTCTGGGCTCTGGACTCCACGGATGCGTGGGCAG GGAGGCTTTCTGGGCTCTGGACTCCACGGATGTGTGGGCAG < 41bp 1 0.429229389370968 1 0.653415083885193 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 APEH ENSG00000164062 UTR3 Human protein_coding chr3:49720875 chr3:49720887 . . 0 hm6A_associated_SNPs_5638 0 0 1 1 49720869 49720892 mRNA hsa-miR-338-3p APEH miRanda miRanda
14034 chr3 50257710 50257710 1 + C T rs587760569 50257716 + 50257696 50257736 41 GGAGGAGAAAGACGCGATTAACACTGTGGCATTCAGCCAGG GGAGGAGAAAGACGTGATTAACACTGTGGCATTCAGCCAGG < 41bp 1 0.172284757567195 1 0.813322424888611 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50257716 chr3:50257710 . . 0 hm6A_associated_SNPs_5642 0 0 0 1 50257701 50257724 mRNA hsa-miR-128 SLC38A3 miRanda miRanda
14034 chr3 50686198 50686198 1 + A C rs11130254 50686191 + 50686171 50686211 41 TATTCCCGACCCAAAGGGTGACTTTTCATCTGAACTTAAGG TATTCCCGACCCAAAGGGTGACTTTTCCTCTGAACTTAAGG < 41bp 1 0.392360221104189 1 0.159525573253632 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 MAPKAPK3 ENSG00000114738 UTR3 Human protein_coding chr3:50686191 chr3:50686198 . . 0 hm6A_associated_SNPs_5648 0 0 1 1 50686197 50686218 mRNA hsa-miR-150 MAPKAPK3 miRanda miRanda
14034 chr3 50686198 50686198 1 + A C rs11130254 50686204 + 50686184 50686224 41 AAGGGTGACTTTTCATCTGAACTTAAGGTGGGAGATATTTT AAGGGTGACTTTTCCTCTGAACTTAAGGTGGGAGATATTTT < 41bp 1 0.559804206551718 1 0.319371849298477 experiment 0.880391586896564 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 15 MAPKAPK3 ENSG00000114738 UTR3 Human protein_coding chr3:50686204 chr3:50686198 . . 0 hm6A_associated_SNPs_5649 0 0 1 1 50686197 50686218 mRNA hsa-miR-150 MAPKAPK3 miRanda miRanda
14034 chr3 55108400 55108400 1 + T C rs191950513 55108387 + 55108367 55108407 41 TTAAACTGTGCGTGATATAAACTCTTAAAGATATGTTGACA TTAAACTGTGCGTGATATAAACTCTTAAAGATACGTTGACA < 41bp 1 0.112812449991229 1 0.936021387577057 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 CACNA2D3 ENSG00000157445 UTR3 Human protein_coding chr3:55108387 chr3:55108400 . . 0 hm6A_associated_SNPs_5681 0 0 0 3 55108392 55108412 mRNA hsa-miR-129-5p CACNA2D3 miRanda miRanda
14034 chr3 55108400 55108400 1 + T C rs191950513 55108387 + 55108367 55108407 41 TTAAACTGTGCGTGATATAAACTCTTAAAGATATGTTGACA TTAAACTGTGCGTGATATAAACTCTTAAAGATACGTTGACA < 41bp 1 0.112812449991229 1 0.936021387577057 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 CACNA2D3 ENSG00000157445 UTR3 Human protein_coding chr3:55108387 chr3:55108400 . . 0 hm6A_associated_SNPs_5681 0 0 0 3 55108382 55108407 mRNA hsa-miR-505 CACNA2D3 miRanda miRanda
14034 chr3 55108400 55108400 1 + T C rs191950513 55108387 + 55108367 55108407 41 TTAAACTGTGCGTGATATAAACTCTTAAAGATATGTTGACA TTAAACTGTGCGTGATATAAACTCTTAAAGATACGTTGACA < 41bp 1 0.112812449991229 1 0.936021387577057 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 CACNA2D3 ENSG00000157445 UTR3 Human protein_coding chr3:55108387 chr3:55108400 . . 0 hm6A_associated_SNPs_5681 0 0 0 3 55108383 55108406 mRNA hsa-miR-421 CACNA2D3 miRanda miRanda
14034 chr3 56628031 56628031 1 + G A rs7637449 56628041 + 56628021 56628061 41 CGAGACAGACGACGACAAAAACAATTAGAGCATCAGGTATT CGAGACAGACAACGACAAAAACAATTAGAGCATCAGGTATT < 41bp 1 0.54001362571177 1 0.505007028579712 experiment 0.919972748576461 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56628041 chr3:56628031 nonsynonymous SNV 0.578 3 hm6A_associated_SNPs_5682 0 0 1 1 56628019 56628042 mRNA hsa-miR-129-5p CCDC66 miRanda miRanda
14034 chr3 56647648 56647648 1 + G A rs190038122 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCACAGGAAGAAACAACTGGAGGAAGAGCAAAG < 41bp 1 0.577076015326032 1 0.707953691482544 experiment 0.845847969347935 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647648 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_5685 0 0 1 2 56647646 56647666 mRNA hsa-miR-199b-5p CCDC66 miRanda miRanda
14034 chr3 56647648 56647648 1 + G A rs190038122 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCACAGGAAGAAACAACTGGAGGAAGAGCAAAG < 41bp 1 0.577076015326032 1 0.707953691482544 experiment 0.845847969347935 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647648 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_5685 0 0 1 2 56647644 56647667 mRNA hsa-miR-145 CCDC66 miRanda miRanda
14034 chr3 56647662 56647662 1 + C T rs62637707 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCGCAGGAAGAAACAATTGGAGGAAGAGCAAAG < 41bp 1 0.648469171609576 1 0.700599431991577 experiment 0.703061656780848 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647662 synonymous SNV . 0 hm6A_associated_SNPs_5686 0 0 1 2 56647646 56647666 mRNA hsa-miR-199b-5p CCDC66 miRanda miRanda
14034 chr3 56647662 56647662 1 + C T rs62637707 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCGCAGGAAGAAACAATTGGAGGAAGAGCAAAG < 41bp 1 0.648469171609576 1 0.700599431991577 experiment 0.703061656780848 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647662 synonymous SNV . 0 hm6A_associated_SNPs_5686 0 0 1 2 56647644 56647667 mRNA hsa-miR-145 CCDC66 miRanda miRanda
14034 chr3 57305787 57305787 1 + G A rs532971945 57305772 + 57305752 57305792 41 GGCAGACTTAGGGATGCTGGACAGACCTGTAGTTCGTTTTA GGCAGACTTAGGGATGCTGGACAGACCTGTAGTTCATTTTA < 41bp 1 0.257623825960126 1 0.0546146333217621 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 LOC105377102 ENSG00000157500 UTR3 Human protein_coding chr3:57305772 chr3:57305787 . . 0 hm6A_associated_SNPs_5693 0 0 1 1 57305780 57305804 mRNA hsa-miR-203 APPL1 miRanda miRanda
14034 chr3 57546547 57546547 1 + G A rs139987987 57546536 + 57546516 57546556 41 AGTTATAGGTGACCTTAGAGACCTAAGGTGAGAGACTTGAC AGTTATAGGTGACCTTAGAGACCTAAGGTGAAAGACTTGAC < 41bp 1 0.466829714054219 1 0.0179649293422699 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 PDE12 ENSG00000174840 UTR3 Human protein_coding chr3:57546536 chr3:57546547 . . 0 hm6A_associated_SNPs_5694 0 0 1 2 57546537 57546563 mRNA hsa-miR-199a-5p PDE12 miRanda miRanda
14034 chr3 57546547 57546547 1 + G A rs139987987 57546536 + 57546516 57546556 41 AGTTATAGGTGACCTTAGAGACCTAAGGTGAGAGACTTGAC AGTTATAGGTGACCTTAGAGACCTAAGGTGAAAGACTTGAC < 41bp 1 0.466829714054219 1 0.0179649293422699 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 PDE12 ENSG00000174840 UTR3 Human protein_coding chr3:57546536 chr3:57546547 . . 0 hm6A_associated_SNPs_5694 0 0 1 2 57546540 57546563 mRNA hsa-miR-199b-5p PDE12 miRanda miRanda
14034 chr3 57546547 57546547 1 + G A rs139987987 57546555 + 57546535 57546575 41 GACCTAAGGTGAGAGACTTGACACATGGAAGGAGTAACATT GACCTAAGGTGAAAGACTTGACACATGGAAGGAGTAACATT < 41bp 1 0.764108800184904 1 0.00481194257736206 experiment 0.471782399630192 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 PDE12 ENSG00000174840 UTR3 Human protein_coding chr3:57546555 chr3:57546547 . . 0 hm6A_associated_SNPs_5695 0 0 1 2 57546537 57546563 mRNA hsa-miR-199a-5p PDE12 miRanda miRanda
14034 chr3 57546547 57546547 1 + G A rs139987987 57546555 + 57546535 57546575 41 GACCTAAGGTGAGAGACTTGACACATGGAAGGAGTAACATT GACCTAAGGTGAAAGACTTGACACATGGAAGGAGTAACATT < 41bp 1 0.764108800184904 1 0.00481194257736206 experiment 0.471782399630192 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 PDE12 ENSG00000174840 UTR3 Human protein_coding chr3:57546555 chr3:57546547 . . 0 hm6A_associated_SNPs_5695 0 0 1 2 57546540 57546563 mRNA hsa-miR-199b-5p PDE12 miRanda miRanda
14034 chr3 57913714 57913714 1 + A G rs1057719 57913708 + 57913688 57913728 41 AAAATACGTTTGGAAAATAAACTGTTATGGTGATAATTTGG AAAATACGTTTGGAAAATAAACTGTTGTGGTGATAATTTGG < 41bp 1 0.376438527548012 1 0.970708727836609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 SLMAP ENSG00000163681 UTR3 Human protein_coding chr3:57913708 chr3:57913714 . . 0 hm6A_associated_SNPs_5699 0 0 1 3 57913700 57913721 mRNA hsa-miR-197 SLMAP miRanda miRanda
14034 chr3 57913714 57913714 1 + A G rs1057719 57913708 + 57913688 57913728 41 AAAATACGTTTGGAAAATAAACTGTTATGGTGATAATTTGG AAAATACGTTTGGAAAATAAACTGTTGTGGTGATAATTTGG < 41bp 1 0.376438527548012 1 0.970708727836609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 SLMAP ENSG00000163681 UTR3 Human protein_coding chr3:57913708 chr3:57913714 . . 0 hm6A_associated_SNPs_5699 0 0 1 3 57913694 57913714 mRNA hsa-miR-212 SLMAP miRanda miRanda
14034 chr3 57913714 57913714 1 + A G rs1057719 57913708 + 57913688 57913728 41 AAAATACGTTTGGAAAATAAACTGTTATGGTGATAATTTGG AAAATACGTTTGGAAAATAAACTGTTGTGGTGATAATTTGG < 41bp 1 0.376438527548012 1 0.970708727836609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 SLMAP ENSG00000163681 UTR3 Human protein_coding chr3:57913708 chr3:57913714 . . 0 hm6A_associated_SNPs_5699 0 0 1 3 57913693 57913714 mRNA hsa-miR-132 SLMAP miRanda miRanda
14034 chr3 58279672 58279672 1 + C T rs11706920 58279660 + 58279640 58279680 41 GGTTCCCCAGAGCTTTGGGGACCACGCGAAAACCTCCAAGA GGTTCCCCAGAGCTTTGGGGACCACGCGAAAATCTCCAAGA < 41bp 1 0.568483726950475 1 0.946405291557312 experiment 0.86303254609905 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 ABHD6 ENSG00000163686 UTR3 Human protein_coding chr3:58279660 chr3:58279672 . . 0 hm6A_associated_SNPs_5714 0 0 1 1 58279672 58279693 mRNA hsa-miR-758 ABHD6 miRanda miRanda
14034 chr3 58304793 58304793 1 + C G rs144693526 58304781 + 58304761 58304801 41 GATAGATTTGCATTTGGATAACAAATCCCTACCTATAGCCA GATAGATTTGCATTTGGATAACAAATCCCTACGTATAGCCA < 41bp 1 0.512775295366263 1 0.0114414691925049 experiment 0.974449409267474 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 HTD2;RPP14 ENSG00000163684 UTR3 Human protein_coding chr3:58304781 chr3:58304793 . . 0 hm6A_associated_SNPs_5715 0 0 1 6 58304793 58304816 mRNA hsa-miR-302a RPP14 miRanda miRanda
14034 chr3 58304793 58304793 1 + C G rs144693526 58304781 + 58304761 58304801 41 GATAGATTTGCATTTGGATAACAAATCCCTACCTATAGCCA GATAGATTTGCATTTGGATAACAAATCCCTACGTATAGCCA < 41bp 1 0.512775295366263 1 0.0114414691925049 experiment 0.974449409267474 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 HTD2;RPP14 ENSG00000163684 UTR3 Human protein_coding chr3:58304781 chr3:58304793 . . 0 hm6A_associated_SNPs_5715 0 0 1 6 58304793 58304816 mRNA hsa-miR-302b RPP14 miRanda miRanda
14034 chr3 58304793 58304793 1 + C G rs144693526 58304781 + 58304761 58304801 41 GATAGATTTGCATTTGGATAACAAATCCCTACCTATAGCCA GATAGATTTGCATTTGGATAACAAATCCCTACGTATAGCCA < 41bp 1 0.512775295366263 1 0.0114414691925049 experiment 0.974449409267474 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 HTD2;RPP14 ENSG00000163684 UTR3 Human protein_coding chr3:58304781 chr3:58304793 . . 0 hm6A_associated_SNPs_5715 0 0 1 6 58304793 58304816 mRNA hsa-miR-302c RPP14 miRanda miRanda
14034 chr3 58304793 58304793 1 + C G rs144693526 58304781 + 58304761 58304801 41 GATAGATTTGCATTTGGATAACAAATCCCTACCTATAGCCA GATAGATTTGCATTTGGATAACAAATCCCTACGTATAGCCA < 41bp 1 0.512775295366263 1 0.0114414691925049 experiment 0.974449409267474 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 HTD2;RPP14 ENSG00000163684 UTR3 Human protein_coding chr3:58304781 chr3:58304793 . . 0 hm6A_associated_SNPs_5715 0 0 1 6 58304793 58304816 mRNA hsa-miR-302d RPP14 miRanda miRanda
14034 chr3 58304793 58304793 1 + C G rs144693526 58304781 + 58304761 58304801 41 GATAGATTTGCATTTGGATAACAAATCCCTACCTATAGCCA GATAGATTTGCATTTGGATAACAAATCCCTACGTATAGCCA < 41bp 1 0.512775295366263 1 0.0114414691925049 experiment 0.974449409267474 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 HTD2;RPP14 ENSG00000163684 UTR3 Human protein_coding chr3:58304781 chr3:58304793 . . 0 hm6A_associated_SNPs_5715 0 0 1 6 58304793 58304816 mRNA hsa-miR-372 RPP14 miRanda miRanda
14034 chr3 58304793 58304793 1 + C G rs144693526 58304781 + 58304761 58304801 41 GATAGATTTGCATTTGGATAACAAATCCCTACCTATAGCCA GATAGATTTGCATTTGGATAACAAATCCCTACGTATAGCCA < 41bp 1 0.512775295366263 1 0.0114414691925049 experiment 0.974449409267474 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 HTD2;RPP14 ENSG00000163684 UTR3 Human protein_coding chr3:58304781 chr3:58304793 . . 0 hm6A_associated_SNPs_5715 0 0 1 6 58304793 58304816 mRNA hsa-miR-373 RPP14 miRanda miRanda
14034 chr3 69153935 69153935 1 + A T rs11128112 69153929 + 69153909 69153949 41 AGCATGCATGTATAGGCCGAACTATTATCAGCTCTGATGTT AGCATGCATGTATAGGCCGAACTATTTTCAGCTCTGATGTT < 41bp 1 0.764657625287924 1 0.989732801914215 experiment 0.470684749424151 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 ARL6IP5 ENSG00000144746 UTR3 Human protein_coding chr3:69153929 chr3:69153935 . . 0 hm6A_associated_SNPs_5739 0 0 1 1 69153929 69153952 mRNA hsa-miR-494 ARL6IP5 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114927 73114948 mRNA hsa-miR-25 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114931 73114948 mRNA hsa-miR-32 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114927 73114948 mRNA hsa-miR-92a PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114935 73114957 mRNA hsa-miR-136 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114927 73114948 mRNA hsa-miR-363 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114920 73114948 mRNA hsa-miR-367 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114926 73114947 mRNA hsa-miR-377 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114927 73114948 mRNA hsa-miR-92b PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114923 + 73114903 73114943 41 TACATACAGTTCTGGTTTTAACACTGTATAAAACTTTTGTG TACATACAGTTCTGGTTTTAACACTGTATAAAGCTTTTGTG < 41bp 1 0.789161723445825 1 0.987589836120605 experiment 0.42167655310835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114923 chr3:73114935 . . 0 hm6A_associated_SNPs_5752 0 0 1 9 73114933 73114954 mRNA hsa-miR-590-3p PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114927 73114948 mRNA hsa-miR-25 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114931 73114948 mRNA hsa-miR-32 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114927 73114948 mRNA hsa-miR-92a PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114935 73114957 mRNA hsa-miR-136 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114927 73114948 mRNA hsa-miR-363 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114920 73114948 mRNA hsa-miR-367 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114926 73114947 mRNA hsa-miR-377 PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114927 73114948 mRNA hsa-miR-92b PPP4R2 miRanda miRanda
14034 chr3 73114935 73114935 1 + A G rs147486232 73114955 + 73114935 73114975 41 ACTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA GCTTTTGTGTAATAAAATGGACCTTTAGTTTTACAAGAGAA < 41bp 1 0.651313377138017 1 0.992282629013062 experiment 0.697373245723966 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 PPP4R2 ENSG00000163605 UTR3 Human protein_coding chr3:73114955 chr3:73114935 . . 0 hm6A_associated_SNPs_5753 0 0 1 9 73114933 73114954 mRNA hsa-miR-590-3p PPP4R2 miRanda miRanda
14034 chr3 87303716 87303716 1 + C A rs185167991 87303728 + 87303708 87303748 41 AATATGTACTCTTATTTTAGACACGCCTCTGTTAAAACAGA AATATGTAATCTTATTTTAGACACGCCTCTGTTAAAACAGA < 41bp 1 0.354942834982664 1 0.436891078948975 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 9 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87303728 chr3:87303716 . . 0 hm6A_associated_SNPs_5756 0 0 1 1 87303712 87303733 mRNA hsa-miR-187 CHMP2B miRanda miRanda
14034 chr3 87304560 87304560 1 + C T rs11426 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTATGTTCTTGTTTA < 41bp 1 0.0847161676515926 1 0.142375975847244 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304560 . . 0 hm6A_associated_SNPs_5759 1 0 1 5 87304552 87304573 mRNA hsa-miR-30a CHMP2B miRanda miRanda
14034 chr3 87304560 87304560 1 + C T rs11426 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTATGTTCTTGTTTA < 41bp 1 0.0847161676515926 1 0.142375975847244 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304560 . . 0 hm6A_associated_SNPs_5759 1 0 1 5 87304551 87304573 mRNA hsa-miR-30c CHMP2B miRanda miRanda
14034 chr3 87304560 87304560 1 + C T rs11426 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTATGTTCTTGTTTA < 41bp 1 0.0847161676515926 1 0.142375975847244 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304560 . . 0 hm6A_associated_SNPs_5759 1 0 1 5 87304552 87304573 mRNA hsa-miR-30d CHMP2B miRanda miRanda
14034 chr3 87304560 87304560 1 + C T rs11426 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTATGTTCTTGTTTA < 41bp 1 0.0847161676515926 1 0.142375975847244 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304560 . . 0 hm6A_associated_SNPs_5759 1 0 1 5 87304552 87304573 mRNA hsa-miR-30b CHMP2B miRanda miRanda
14034 chr3 87304560 87304560 1 + C T rs11426 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTATGTTCTTGTTTA < 41bp 1 0.0847161676515926 1 0.142375975847244 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304560 . . 0 hm6A_associated_SNPs_5759 1 0 1 5 87304552 87304573 mRNA hsa-miR-30e CHMP2B miRanda miRanda
14034 chr3 87304561 87304561 1 + G A rs1060241 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTACATTCTTGTTTA < 41bp 1 0.083064083366141 1 0.243593573570251 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304561 . . 0 hm6A_associated_SNPs_5760 2 0 1 6 87304552 87304573 mRNA hsa-miR-30a CHMP2B miRanda miRanda
14034 chr3 87304561 87304561 1 + G A rs1060241 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTACATTCTTGTTTA < 41bp 1 0.083064083366141 1 0.243593573570251 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304561 . . 0 hm6A_associated_SNPs_5760 2 0 1 6 87304551 87304573 mRNA hsa-miR-30c CHMP2B miRanda miRanda
14034 chr3 87304561 87304561 1 + G A rs1060241 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTACATTCTTGTTTA < 41bp 1 0.083064083366141 1 0.243593573570251 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304561 . . 0 hm6A_associated_SNPs_5760 2 0 1 6 87304552 87304573 mRNA hsa-miR-30d CHMP2B miRanda miRanda
14034 chr3 87304561 87304561 1 + G A rs1060241 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTACATTCTTGTTTA < 41bp 1 0.083064083366141 1 0.243593573570251 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304561 . . 0 hm6A_associated_SNPs_5760 2 0 1 6 87304552 87304573 mRNA hsa-miR-30b CHMP2B miRanda miRanda
14034 chr3 87304561 87304561 1 + G A rs1060241 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTACATTCTTGTTTA < 41bp 1 0.083064083366141 1 0.243593573570251 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304561 . . 0 hm6A_associated_SNPs_5760 2 0 1 6 87304561 87304582 mRNA hsa-miR-150 CHMP2B miRanda miRanda
14034 chr3 87304561 87304561 1 + G A rs1060241 87304551 + 87304531 87304571 41 GTACATAATAATGCCATCTAACTTATTTACGTTCTTGTTTA GTACATAATAATGCCATCTAACTTATTTACATTCTTGTTTA < 41bp 1 0.083064083366141 1 0.243593573570251 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 CHMP2B ENSG00000083937 UTR3 Human protein_coding chr3:87304551 chr3:87304561 . . 0 hm6A_associated_SNPs_5760 2 0 1 6 87304552 87304573 mRNA hsa-miR-30e CHMP2B miRanda miRanda
14034 chr3 88206077 88206077 1 + T G rs145577723 88206075 + 88206055 88206095 41 CACTTTAGATCTTACAGCTAACTGTGTGCCTTAGAAACCAG CACTTTAGATCTTACAGCTAACGGTGTGCCTTAGAAACCAG Direct Loss 1 0.61180652452352 1 0.248128890991211 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 C3orf38 ENSG00000179021 UTR3 Human protein_coding chr3:88206075 chr3:88206077 . . 0 hm6A_associated_SNPs_5762 0 0 1 2 88206068 88206087 mRNA hsa-miR-124 C3orf38 miRanda miRanda
14034 chr3 88206077 88206077 1 + T G rs145577723 88206075 + 88206055 88206095 41 CACTTTAGATCTTACAGCTAACTGTGTGCCTTAGAAACCAG CACTTTAGATCTTACAGCTAACGGTGTGCCTTAGAAACCAG Direct Loss 1 0.61180652452352 1 0.248128890991211 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 C3orf38 ENSG00000179021 UTR3 Human protein_coding chr3:88206075 chr3:88206077 . . 0 hm6A_associated_SNPs_5762 0 0 1 2 88206067 88206087 mRNA hsa-miR-506 C3orf38 miRanda miRanda
14034 chr3 89530956 89530956 1 + G A rs73139148 89530968 + 89530948 89530988 41 TTTGTACAGGAACTGCATTGACTTTCAGTAAACATAAAGCC TTTGTACAAGAACTGCATTGACTTTCAGTAAACATAAAGCC < 41bp 1 0.0282130109546687 1 0.876962780952454 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 EPHA3 ENSG00000044524 UTR3 Human protein_coding chr3:89530968 chr3:89530956 . . 0 hm6A_associated_SNPs_5767 0 0 1 1 89530935 89530958 mRNA hsa-miR-486-5p EPHA3 miRanda miRanda
14034 chr3 100043904 100043904 1 + T C rs73862445 100043913 + 100043893 100043933 41 TGATATAACTCTCCCCTAAAACTGTTGTAATTGCATTTTTT TGATATAACTCCCCCCTAAAACTGTTGTAATTGCATTTTTT < 41bp 1 0.236991781081585 1 0.00275176763534546 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 TBC1D23 ENSG00000036054 UTR3 Human protein_coding chr3:100043913 chr3:100043904 . . 0 hm6A_associated_SNPs_5786 0 0 1 4 100043899 100043919 mRNA hsa-miR-212 TBC1D23 miRanda miRanda
14034 chr3 100043904 100043904 1 + T C rs73862445 100043913 + 100043893 100043933 41 TGATATAACTCTCCCCTAAAACTGTTGTAATTGCATTTTTT TGATATAACTCCCCCCTAAAACTGTTGTAATTGCATTTTTT < 41bp 1 0.236991781081585 1 0.00275176763534546 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 TBC1D23 ENSG00000036054 UTR3 Human protein_coding chr3:100043913 chr3:100043904 . . 0 hm6A_associated_SNPs_5786 0 0 1 4 100043898 100043919 mRNA hsa-miR-132 TBC1D23 miRanda miRanda
14034 chr3 100043904 100043904 1 + T C rs73862445 100043913 + 100043893 100043933 41 TGATATAACTCTCCCCTAAAACTGTTGTAATTGCATTTTTT TGATATAACTCCCCCCTAAAACTGTTGTAATTGCATTTTTT < 41bp 1 0.236991781081585 1 0.00275176763534546 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 TBC1D23 ENSG00000036054 UTR3 Human protein_coding chr3:100043913 chr3:100043904 . . 0 hm6A_associated_SNPs_5786 0 0 1 4 100043886 100043907 mRNA hsa-miR-185 TBC1D23 miRanda miRanda
14034 chr3 100043904 100043904 1 + T C rs73862445 100043913 + 100043893 100043933 41 TGATATAACTCTCCCCTAAAACTGTTGTAATTGCATTTTTT TGATATAACTCCCCCCTAAAACTGTTGTAATTGCATTTTTT < 41bp 1 0.236991781081585 1 0.00275176763534546 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 TBC1D23 ENSG00000036054 UTR3 Human protein_coding chr3:100043913 chr3:100043904 . . 0 hm6A_associated_SNPs_5786 0 0 1 4 100043900 100043921 mRNA hsa-miR-421 TBC1D23 miRanda miRanda
14034 chr3 100120481 100120481 1 + C G rs146388224 100120480 + 100120460 100120500 41 GAAACCAACGGATTAGAAGGACTTTTAAAGATGTGTGAGGA GAAACCAACGGATTAGAAGGAGTTTTAAAGATGTGTGAGGA Direct Loss 1 0.374390133895317 1 0.986464977264404 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 LNP1 ENSG00000206535 UTR5 Human protein_coding chr3:100120480 chr3:100120481 . . 0 hm6A_associated_SNPs_5789 0 0 1 2 100120477 100120498 mRNA hsa-miR-377 LNP1 miRanda miRanda
14034 chr3 100120481 100120481 1 + C G rs146388224 100120480 + 100120460 100120500 41 GAAACCAACGGATTAGAAGGACTTTTAAAGATGTGTGAGGA GAAACCAACGGATTAGAAGGAGTTTTAAAGATGTGTGAGGA Direct Loss 1 0.374390133895317 1 0.986464977264404 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 LNP1 ENSG00000206535 UTR5 Human protein_coding chr3:100120480 chr3:100120481 . . 0 hm6A_associated_SNPs_5789 0 0 1 2 100120477 100120499 mRNA hsa-miR-342-3p LNP1 miRanda miRanda
14034 chr3 101284940 101284940 1 + T C rs72948069 101284955 + 101284935 101284975 41 GTTAATGTATTTCTTCCCAAACAATTCATTTTTCTCTTCTA GTTAACGTATTTCTTCCCAAACAATTCATTTTTCTCTTCTA < 41bp 1 0.449425097028781 1 0.279676288366318 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 TRMT10C ENSG00000174173 UTR3 Human protein_coding chr3:101284955 chr3:101284940 . . 0 hm6A_associated_SNPs_5800 0 0 1 1 101284930 101284952 mRNA hsa-miR-7 RG9MTD1 miRanda miRanda
14034 chr3 101285020 101285020 1 + A G rs140769983 101285036 + 101285016 101285056 41 CCCAATTAAATATCTGCAGAACTTTGGGATTATACTTTGTT CCCAGTTAAATATCTGCAGAACTTTGGGATTATACTTTGTT < 41bp 1 0.438776813071536 1 0.729218125343323 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 TRMT10C ENSG00000174173 UTR3 Human protein_coding chr3:101285036 chr3:101285020 . . 0 hm6A_associated_SNPs_5801 0 0 1 1 101285014 101285037 mRNA hsa-miR-544 RG9MTD1 miRanda miRanda
14034 chr3 101312800 101312800 1 + T A rs11556582 101312808 + 101312788 101312828 41 ATGAACTTTTTTTAAATGTGACAGTTAAACACATCTTTAAA ATGAACTTTTTTAAAATGTGACAGTTAAACACATCTTTAAA < 41bp 1 0.452371570672292 1 0.724915266036987 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 PCNP ENSG00000081154 UTR3 Human protein_coding chr3:101312808 chr3:101312800 . . 0 hm6A_associated_SNPs_5805 0 0 1 2 101312789 101312809 mRNA hsa-miR-23a PCNP miRanda miRanda
14034 chr3 101312800 101312800 1 + T A rs11556582 101312808 + 101312788 101312828 41 ATGAACTTTTTTTAAATGTGACAGTTAAACACATCTTTAAA ATGAACTTTTTTAAAATGTGACAGTTAAACACATCTTTAAA < 41bp 1 0.452371570672292 1 0.724915266036987 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 PCNP ENSG00000081154 UTR3 Human protein_coding chr3:101312808 chr3:101312800 . . 0 hm6A_associated_SNPs_5805 0 0 1 2 101312789 101312809 mRNA hsa-miR-23b PCNP miRanda miRanda
14034 chr3 101543843 101543843 1 + T A rs3911414 101543854 + 101543834 101543874 41 TTAAAAAAATTTTTTTTTTAACAACTTTTAAGTTCAGGGGT TTAAAAAAAATTTTTTTTTAACAACTTTTAAGTTCAGGGGT < 41bp 1 0.0817168398845164 1 0.000250011682510376 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 NXPE3 ENSG00000144815 UTR3 Human protein_coding chr3:101543854 chr3:101543843 . . 0 hm6A_associated_SNPs_5813 0 0 1 1 101543840 101543861 mRNA hsa-miR-382 FAM55C miRanda miRanda
14034 chr3 101543844 101543844 1 + T A rs562676110 101543854 + 101543834 101543874 41 TTAAAAAAATTTTTTTTTTAACAACTTTTAAGTTCAGGGGT TTAAAAAAATATTTTTTTTAACAACTTTTAAGTTCAGGGGT < 41bp 1 0.0783960374349461 1 0.000227481126785278 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 NXPE3 ENSG00000144815 UTR3 Human protein_coding chr3:101543854 chr3:101543844 . . 0 hm6A_associated_SNPs_5814 0 0 1 1 101543840 101543861 mRNA hsa-miR-382 FAM55C miRanda miRanda
14034 chr3 105294534 105294534 1 + A G rs6790496 105294552 + 105294532 105294572 41 CCAGATATGGGCTACTTGTGACTAGACTTTTAAACTTTGCT CCGGATATGGGCTACTTGTGACTAGACTTTTAAACTTTGCT < 41bp 1 0.234786258436487 1 0.798841655254364 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ALCAM ENSG00000170017 UTR3 Human protein_coding chr3:105294552 chr3:105294534 . . 0 hm6A_associated_SNPs_5819 0 0 1 2 105294532 105294553 mRNA hsa-miR-27a ALCAM miRanda miRanda
14034 chr3 105294534 105294534 1 + A G rs6790496 105294552 + 105294532 105294572 41 CCAGATATGGGCTACTTGTGACTAGACTTTTAAACTTTGCT CCGGATATGGGCTACTTGTGACTAGACTTTTAAACTTTGCT < 41bp 1 0.234786258436487 1 0.798841655254364 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ALCAM ENSG00000170017 UTR3 Human protein_coding chr3:105294552 chr3:105294534 . . 0 hm6A_associated_SNPs_5819 0 0 1 2 105294532 105294553 mRNA hsa-miR-27b ALCAM miRanda miRanda
14034 chr3 105294716 105294716 1 + T C rs143315036 105294728 + 105294708 105294748 41 AACTGGTGTTTGTTTCTTAGACTCATGAAATAAAAAATTAT AACTGGTGCTTGTTTCTTAGACTCATGAAATAAAAAATTAT < 41bp 1 0.18693001874944 1 0.653225362300873 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ALCAM ENSG00000170017 UTR3 Human protein_coding chr3:105294728 chr3:105294716 . . 0 hm6A_associated_SNPs_5821 0 0 1 2 105294715 105294736 mRNA hsa-miR-433 ALCAM miRanda miRanda
14034 chr3 105294716 105294716 1 + T C rs143315036 105294728 + 105294708 105294748 41 AACTGGTGTTTGTTTCTTAGACTCATGAAATAAAAAATTAT AACTGGTGCTTGTTTCTTAGACTCATGAAATAAAAAATTAT < 41bp 1 0.18693001874944 1 0.653225362300873 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ALCAM ENSG00000170017 UTR3 Human protein_coding chr3:105294728 chr3:105294716 . . 0 hm6A_associated_SNPs_5821 0 0 1 2 105294700 105294722 mRNA hsa-miR-495 ALCAM miRanda miRanda
14034 chr3 105295191 105295191 1 + C T rs181019943 105295188 + 105295168 105295208 41 AGAAATTCTAAAATTTTTAAACACCTGCTCTCCACAATAAA AGAAATTCTAAAATTTTTAAACATCTGCTCTCCACAATAAA < 41bp 1 0.31161455754421 1 0.433914721012115 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 ALCAM ENSG00000170017 UTR3 Human protein_coding chr3:105295188 chr3:105295191 . . 0 hm6A_associated_SNPs_5822 0 0 1 2 105295174 105295195 mRNA hsa-miR-125a-3p ALCAM miRanda miRanda
14034 chr3 105295191 105295191 1 + C T rs181019943 105295188 + 105295168 105295208 41 AGAAATTCTAAAATTTTTAAACACCTGCTCTCCACAATAAA AGAAATTCTAAAATTTTTAAACATCTGCTCTCCACAATAAA < 41bp 1 0.31161455754421 1 0.433914721012115 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 ALCAM ENSG00000170017 UTR3 Human protein_coding chr3:105295188 chr3:105295191 . . 0 hm6A_associated_SNPs_5822 0 0 1 2 105295180 105295201 mRNA hsa-miR-185 ALCAM miRanda miRanda
14034 chr3 107525089 107525089 1 + G A rs184703038 107525083 + 107525063 107525103 41 TGTGGCAAATATTTTCCCAGACAGGGGAAGAGTCCTGCAGA TGTGGCAAATATTTTCCCAGACAGGGAAAGAGTCCTGCAGA < 41bp 1 0.596748609522632 1 0.00794664025306702 experiment 0.806502780954737 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 27 BBX ENSG00000114439 UTR3 Human protein_coding chr3:107525083 chr3:107525089 . . 0 hm6A_associated_SNPs_5828 0 0 1 1 107525067 107525089 mRNA hsa-miR-339-5p BBX miRanda miRanda
14034 chr3 111693679 111693679 1 + A T rs3749300 111693684 + 111693664 111693704 41 TATAGGAACATTTCTAATAAACTGTTTTTAATCAGTTGTCG TATAGGAACATTTCTTATAAACTGTTTTTAATCAGTTGTCG < 41bp 1 0.313868127713429 1 0.980339169502258 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 PHLDB2 ENSG00000144824 UTR3 Human protein_coding chr3:111693684 chr3:111693679 . . 0 hm6A_associated_SNPs_5851 0 0 1 1 111693658 111693679 mRNA hsa-miR-203 PHLDB2 miRanda miRanda
14034 chr3 111694183 111694183 1 + G A rs73852799 111694200 + 111694180 111694220 41 CAGGCATTCTGTCATGTTGAACAATTTTAAATAAAGAGAAT CAGACATTCTGTCATGTTGAACAATTTTAAATAAAGAGAAT < 41bp 1 0.168234512086078 1 0.80732786655426 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 PHLDB2 ENSG00000144824 UTR3 Human protein_coding chr3:111694200 chr3:111694183 . . 0 hm6A_associated_SNPs_5853 0 0 1 1 111694178 111694200 mRNA hsa-miR-421 PHLDB2 miRanda miRanda
14034 chr3 111694858 111694858 1 + A G rs143265105 111694849 + 111694829 111694869 41 TTTTACTTGAACAGTGAAGGACAAAAATCATGATTGTGGAA TTTTACTTGAACAGTGAAGGACAAAAATCGTGATTGTGGAA < 41bp 1 0.590212091279477 1 0.906681954860687 experiment 0.819575817441046 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 PHLDB2 ENSG00000144824 UTR3 Human protein_coding chr3:111694849 chr3:111694858 . . 0 hm6A_associated_SNPs_5854 0 0 1 1 111694841 111694862 mRNA hsa-miR-433 PHLDB2 miRanda miRanda
14034 chr3 111695170 111695170 1 + G A rs79303007 111695177 + 111695157 111695197 41 GGATGAATTAATCGCAAATGACAGTTGTAGAAACTATGTAA GGATGAATTAATCACAAATGACAGTTGTAGAAACTATGTAA < 41bp 1 0.0961621528168 1 0.733654379844666 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 PHLDB2 ENSG00000144824 UTR3 Human protein_coding chr3:111695177 chr3:111695170 . . 0 hm6A_associated_SNPs_5855 0 0 1 2 111695159 111695182 mRNA hsa-miR-217 PHLDB2 miRanda miRanda
14034 chr3 111695170 111695170 1 + G A rs79303007 111695177 + 111695157 111695197 41 GGATGAATTAATCGCAAATGACAGTTGTAGAAACTATGTAA GGATGAATTAATCACAAATGACAGTTGTAGAAACTATGTAA < 41bp 1 0.0961621528168 1 0.733654379844666 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 PHLDB2 ENSG00000144824 UTR3 Human protein_coding chr3:111695177 chr3:111695170 . . 0 hm6A_associated_SNPs_5855 0 0 1 2 111695154 111695175 mRNA hsa-miR-450a PHLDB2 miRanda miRanda
14034 chr3 111836355 111836355 1 + T C rs16859233 111836366 + 111836346 111836386 41 CTCCATTTATATTTTTATAAACTTCCATTAGAGAATCATTA CTCCATTTACATTTTTATAAACTTCCATTAGAGAATCATTA < 41bp 1 0.0295050073959934 1 0.201121777296066 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 C3orf52 ENSG00000114529 UTR3 Human protein_coding chr3:111836366 chr3:111836355 . . 0 hm6A_associated_SNPs_5857 0 0 1 1 111836341 111836365 mRNA hsa-miR-340 C3orf52 miRanda miRanda
14034 chr3 112714075 112714075 1 + G A rs201459759 112714079 + 112714059 112714099 41 AGCACCTGAAGATTTTGTTGACATGGTAGAGACCTATCTAA AGCACCTGAAGATTTTATTGACATGGTAGAGACCTATCTAA < 41bp 1 0.792822891611406 1 0.127767264842987 experiment 0.414354216777188 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112714079 chr3:112714075 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_5863 0 0 1 1 112714056 112714081 mRNA hsa-miR-505 GTPBP8 miRanda miRanda
14034 chr3 112719907 112719907 1 + T C rs73857317 112719921 + 112719901 112719941 41 AAAACCTGTGCCTTCTCGAAACAAGAATTTGTGCCTGAGGT AAAACCCGTGCCTTCTCGAAACAAGAATTTGTGCCTGAGGT < 41bp 1 0.762879114700494 1 0.902098536491394 experiment 0.474241770599012 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 GTPBP8 ENSG00000163607 UTR3 Human protein_coding chr3:112719921 chr3:112719907 . . 0 hm6A_associated_SNPs_5864 0 0 1 2 112719897 112719915 mRNA hsa-miR-124 GTPBP8 miRanda miRanda
14034 chr3 112719907 112719907 1 + T C rs73857317 112719921 + 112719901 112719941 41 AAAACCTGTGCCTTCTCGAAACAAGAATTTGTGCCTGAGGT AAAACCCGTGCCTTCTCGAAACAAGAATTTGTGCCTGAGGT < 41bp 1 0.762879114700494 1 0.902098536491394 experiment 0.474241770599012 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 GTPBP8 ENSG00000163607 UTR3 Human protein_coding chr3:112719921 chr3:112719907 . . 0 hm6A_associated_SNPs_5864 0 0 1 2 112719894 112719915 mRNA hsa-miR-506 GTPBP8 miRanda miRanda
14034 chr3 112720015 112720015 1 + A C rs144857604 112720011 + 112719991 112720031 41 TAGCTGATTCCCCTATTTTAACAAACTGACAAGAGCACATC TAGCTGATTCCCCTATTTTAACAACCTGACAAGAGCACATC < 41bp 1 0.657851929142885 1 0.834705829620361 experiment 0.684296141714229 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 GTPBP8 ENSG00000163607 UTR3 Human protein_coding chr3:112720011 chr3:112720015 . . 0 hm6A_associated_SNPs_5865 0 0 1 1 112719999 112720021 mRNA hsa-miR-223 GTPBP8 miRanda miRanda
14034 chr3 112720015 112720015 1 + A C rs144857604 112720019 + 112719999 112720039 41 TCCCCTATTTTAACAAACTGACAAGAGCACATCCATAAAAT TCCCCTATTTTAACAACCTGACAAGAGCACATCCATAAAAT < 41bp 1 0.615387815202007 1 0.834007084369659 experiment 0.769224369595987 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 GTPBP8 ENSG00000163607 UTR3 Human protein_coding chr3:112720019 chr3:112720015 . . 0 hm6A_associated_SNPs_5866 0 0 1 1 112719999 112720021 mRNA hsa-miR-223 GTPBP8 miRanda miRanda
14034 chr3 113347380 113347380 1 + C G rs11923085 113347373 + 113347353 113347393 41 AAACAGGAAAAGCTCTTTTAACAGCAGCAGGAACAAGAGAA AAACAGGAAAAGCTCTTTTAACAGCAGGAGGAACAAGAGAA < 41bp 1 0.142603581424659 1 0.921048521995544 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 SIDT1 ENSG00000072858 UTR3 Human protein_coding chr3:113347373 chr3:113347380 . . 0 hm6A_associated_SNPs_5867 0 0 0 1 113347363 113347384 mRNA hsa-miR-370 SIDT1 miRanda miRanda
14034 chr3 113347380 113347380 1 + C G rs11923085 113347385 + 113347365 113347405 41 CTCTTTTAACAGCAGCAGGAACAAGAGAAATGACTAACCAT CTCTTTTAACAGCAGGAGGAACAAGAGAAATGACTAACCAT < 41bp 1 0.201464140174303 1 0.915807604789734 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 SIDT1 ENSG00000072858 UTR3 Human protein_coding chr3:113347385 chr3:113347380 . . 0 hm6A_associated_SNPs_5868 0 0 0 1 113347363 113347384 mRNA hsa-miR-370 SIDT1 miRanda miRanda
14034 chr3 113681222 113681222 1 + G A rs78267260 113681233 + 113681213 113681253 41 AGACTGAACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGC AGACTGAACAGTTAGTGAAGACAAATGTCTTAAGAGGCTGC < 41bp 1 0.337357658867147 1 0.443929821252823 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 ZDHHC23 ENSG00000184307 UTR3 Human protein_coding chr3:113681233 chr3:113681222 . . 0 hm6A_associated_SNPs_5874 0 0 1 1 113681201 113681226 mRNA hsa-miR-451 ZDHHC23 miRanda miRanda
14034 chr3 113804979 113804979 1 + G A rs1872575 113804980 + 113804960 113805000 41 ATTGAACTGTGACCTTTAAGACTTCTAGACTAATTCTTTTA ATTGAACTGTGACCTTTAAAACTTCTAGACTAATTCTTTTA < 41bp 1 0.658006060296309 1 0.92439329624176 experiment 0.683987879407381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 20 QTRT2 ENSG00000151576 UTR3 Human protein_coding chr3:113804980 chr3:113804979 . . 0 hm6A_associated_SNPs_5876 0 0 1 1 113804978 113804999 mRNA hsa-miR-186 QTRTD1 miRanda miRanda
14034 chr3 113804979 113804979 1 + G A rs1872575 113804988 + 113804968 113805008 41 GTGACCTTTAAGACTTCTAGACTAATTCTTTTAGTTGATAG GTGACCTTTAAAACTTCTAGACTAATTCTTTTAGTTGATAG < 41bp 1 0.782632520972337 1 0.889130115509033 experiment 0.434734958055325 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 QTRT2 ENSG00000151576 UTR3 Human protein_coding chr3:113804988 chr3:113804979 . . 0 hm6A_associated_SNPs_5877 0 0 1 1 113804978 113804999 mRNA hsa-miR-186 QTRTD1 miRanda miRanda
14034 chr3 113806921 113806921 1 + A T rs373303306 113806907 + 113806887 113806927 41 GCAAGGGGTACTTATGGAAAACAGTTTTCCAAAGATCTGAT GCAAGGGGTACTTATGGAAAACAGTTTTCCAAAGTTCTGAT < 41bp 1 0.489851279686747 1 0.0518873631954193 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 QTRT2 ENSG00000151576 UTR3 Human protein_coding chr3:113806907 chr3:113806921 . . 0 hm6A_associated_SNPs_5880 0 0 1 1 113806918 113806941 mRNA hsa-miR-181a QTRTD1 miRanda miRanda
14034 chr3 119212998 119212998 1 + T G rs16829878 119213009 + 119212989 119213029 41 GTTTATGCCTGTATTATATGACATCACTGTAGTTGCTTGAC GTTTATGCCGGTATTATATGACATCACTGTAGTTGCTTGAC < 41bp 1 0.186759076147671 1 0.0129774212837219 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 10 POGLUT1 ENSG00000163389 UTR3 Human protein_coding chr3:119213009 chr3:119212998 . . 0 hm6A_associated_SNPs_5885 0 0 1 2 119212988 119213007 mRNA hsa-miR-374a KTELC1 miRanda miRanda
14034 chr3 119212998 119212998 1 + T G rs16829878 119213009 + 119212989 119213029 41 GTTTATGCCTGTATTATATGACATCACTGTAGTTGCTTGAC GTTTATGCCGGTATTATATGACATCACTGTAGTTGCTTGAC < 41bp 1 0.186759076147671 1 0.0129774212837219 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 10 POGLUT1 ENSG00000163389 UTR3 Human protein_coding chr3:119213009 chr3:119212998 . . 0 hm6A_associated_SNPs_5885 0 0 1 2 119212986 119213007 mRNA hsa-miR-374b KTELC1 miRanda miRanda
14034 chr3 119242778 119242778 1 + T C rs13532 119242762 + 119242742 119242782 41 GTCTTTTTCTTTTCTTTTTAACTAAGAATGGGGCTGTTGTA GTCTTTTTCTTTTCTTTTTAACTAAGAATGGGGCTGCTGTA < 41bp 1 0.469720440737334 1 0.208342522382736 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 TIMMDC1 ENSG00000113845 UTR3 Human protein_coding chr3:119242762 chr3:119242778 . . 0 hm6A_associated_SNPs_5887 0 0 1 3 119242762 119242784 mRNA hsa-miR-30c C3orf1 miRanda miRanda
14034 chr3 119242778 119242778 1 + T C rs13532 119242762 + 119242742 119242782 41 GTCTTTTTCTTTTCTTTTTAACTAAGAATGGGGCTGTTGTA GTCTTTTTCTTTTCTTTTTAACTAAGAATGGGGCTGCTGTA < 41bp 1 0.469720440737334 1 0.208342522382736 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 TIMMDC1 ENSG00000113845 UTR3 Human protein_coding chr3:119242762 chr3:119242778 . . 0 hm6A_associated_SNPs_5887 0 0 1 3 119242762 119242784 mRNA hsa-miR-30d C3orf1 miRanda miRanda
14034 chr3 119242778 119242778 1 + T C rs13532 119242762 + 119242742 119242782 41 GTCTTTTTCTTTTCTTTTTAACTAAGAATGGGGCTGTTGTA GTCTTTTTCTTTTCTTTTTAACTAAGAATGGGGCTGCTGTA < 41bp 1 0.469720440737334 1 0.208342522382736 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 TIMMDC1 ENSG00000113845 UTR3 Human protein_coding chr3:119242762 chr3:119242778 . . 0 hm6A_associated_SNPs_5887 0 0 1 3 119242761 119242784 mRNA hsa-miR-30b C3orf1 miRanda miRanda
14034 chr3 122447596 122447596 1 + C A rs7648262 122447615 + 122447595 122447635 41 CCCTTTCATAATGGAAATGAACTTATTATCTTGAGAGCAAA CACTTTCATAATGGAAATGAACTTATTATCTTGAGAGCAAA < 41bp 1 0.325476269199479 1 0.806116044521332 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 PARP14 ENSG00000173193 UTR3 Human protein_coding chr3:122447615 chr3:122447596 . . 0 hm6A_associated_SNPs_5900 0 0 0 1 122447583 122447603 mRNA hsa-miR-488 PARP14 miRanda miRanda
14034 chr3 122447601 122447601 1 + C A rs73856281 122447615 + 122447595 122447635 41 CCCTTTCATAATGGAAATGAACTTATTATCTTGAGAGCAAA CCCTTTAATAATGGAAATGAACTTATTATCTTGAGAGCAAA < 41bp 1 0.332183279508964 1 0.832335352897644 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 PARP14 ENSG00000173193 UTR3 Human protein_coding chr3:122447615 chr3:122447601 . . 0 hm6A_associated_SNPs_5901 0 0 0 1 122447583 122447603 mRNA hsa-miR-488 PARP14 miRanda miRanda
14034 chr3 122821306 122821306 1 + C T rs374370091 122821314 + 122821294 122821334 41 AGTTGACCTGAGCCCGAAGGACAAAAAGGTTGAATTATTCC AGTTGACCTGAGTCCGAAGGACAAAAAGGTTGAATTATTCC < 41bp 1 0.709532267206331 1 0.648415744304657 experiment 0.580935465587339 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122821314 chr3:122821306 synonymous SNV . 0 hm6A_associated_SNPs_5903 0 0 1 1 122821287 122821308 mRNA hsa-miR-24 PDIA5 miRanda miRanda
14034 chr3 122821308 122821308 1 + C G rs377598783 122821314 + 122821294 122821334 41 AGTTGACCTGAGCCCGAAGGACAAAAAGGTTGAATTATTCC AGTTGACCTGAGCCGGAAGGACAAAAAGGTTGAATTATTCC < 41bp 1 0.692823739249478 1 0.732121646404266 experiment 0.614352521501044 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 15 PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122821314 chr3:122821308 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_5904 0 0 1 1 122821287 122821308 mRNA hsa-miR-24 PDIA5 miRanda miRanda
14034 chr3 122991021 122991021 1 + A C rs1137138 122991009 + 122990989 122991029 41 GTTTATGTTTTAAATAAATGACTGTGATAAATATCAGATTA GTTTATGTTTTAAATAAATGACTGTGATAAATCTCAGATTA < 41bp 1 0.376476695984417 1 0.979386806488037 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 SEC22A ENSG00000121542 UTR3 Human protein_coding chr3:122991009 chr3:122991021 . . 0 hm6A_associated_SNPs_5906 0 0 1 3 122991019 122991041 mRNA hsa-miR-18a SEC22A miRanda miRanda
14034 chr3 122991021 122991021 1 + A C rs1137138 122991009 + 122990989 122991029 41 GTTTATGTTTTAAATAAATGACTGTGATAAATATCAGATTA GTTTATGTTTTAAATAAATGACTGTGATAAATCTCAGATTA < 41bp 1 0.376476695984417 1 0.979386806488037 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 SEC22A ENSG00000121542 UTR3 Human protein_coding chr3:122991009 chr3:122991021 . . 0 hm6A_associated_SNPs_5906 0 0 1 3 122991015 122991037 mRNA hsa-miR-19a SEC22A miRanda miRanda
14034 chr3 122991021 122991021 1 + A C rs1137138 122991009 + 122990989 122991029 41 GTTTATGTTTTAAATAAATGACTGTGATAAATATCAGATTA GTTTATGTTTTAAATAAATGACTGTGATAAATCTCAGATTA < 41bp 1 0.376476695984417 1 0.979386806488037 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 SEC22A ENSG00000121542 UTR3 Human protein_coding chr3:122991009 chr3:122991021 . . 0 hm6A_associated_SNPs_5906 0 0 1 3 122991015 122991037 mRNA hsa-miR-19b SEC22A miRanda miRanda
14034 chr3 124462959 124462959 1 + A G rs3772810 124462967 + 124462947 124462987 41 TTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCT TTTTCAGATACAGTGTGAAGACATTGAAGATATGTGGTCCT < 41bp 1 0.595922797527088 1 0.805047631263733 experiment 0.808154404945824 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 UMPS ENSG00000114491 UTR3 Human protein_coding chr3:124462967 chr3:124462959 . . 0 hm6A_associated_SNPs_5909 1 0 1 2 124462945 124462965 mRNA hsa-miR-23a UMPS miRanda miRanda
14034 chr3 124462959 124462959 1 + A G rs3772810 124462967 + 124462947 124462987 41 TTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCT TTTTCAGATACAGTGTGAAGACATTGAAGATATGTGGTCCT < 41bp 1 0.595922797527088 1 0.805047631263733 experiment 0.808154404945824 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 UMPS ENSG00000114491 UTR3 Human protein_coding chr3:124462967 chr3:124462959 . . 0 hm6A_associated_SNPs_5909 1 0 1 2 124462945 124462965 mRNA hsa-miR-23b UMPS miRanda miRanda
14034 chr3 127340764 127340764 1 + A C rs116343860 127340767 + 127340747 127340787 41 GTCTGGCTGCACCTGGCATGACTGTTTGTTTCTCCAAGCCT GTCTGGCTGCACCTGGCCTGACTGTTTGTTTCTCCAAGCCT < 41bp 1 0.738834923938262 1 0.940484642982483 experiment 0.522330152123476 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MCM2 ENSG00000073111 UTR3 Human protein_coding chr3:127340767 chr3:127340764 . . 0 hm6A_associated_SNPs_5921 0 0 1 3 127340751 127340773 mRNA hsa-miR-212 MCM2 miRanda miRanda
14034 chr3 127340764 127340764 1 + A C rs116343860 127340767 + 127340747 127340787 41 GTCTGGCTGCACCTGGCATGACTGTTTGTTTCTCCAAGCCT GTCTGGCTGCACCTGGCCTGACTGTTTGTTTCTCCAAGCCT < 41bp 1 0.738834923938262 1 0.940484642982483 experiment 0.522330152123476 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MCM2 ENSG00000073111 UTR3 Human protein_coding chr3:127340767 chr3:127340764 . . 0 hm6A_associated_SNPs_5921 0 0 1 3 127340755 127340773 mRNA hsa-miR-132 MCM2 miRanda miRanda
14034 chr3 127340764 127340764 1 + A C rs116343860 127340767 + 127340747 127340787 41 GTCTGGCTGCACCTGGCATGACTGTTTGTTTCTCCAAGCCT GTCTGGCTGCACCTGGCCTGACTGTTTGTTTCTCCAAGCCT < 41bp 1 0.738834923938262 1 0.940484642982483 experiment 0.522330152123476 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MCM2 ENSG00000073111 UTR3 Human protein_coding chr3:127340767 chr3:127340764 . . 0 hm6A_associated_SNPs_5921 0 0 1 3 127340755 127340777 mRNA hsa-miR-495 MCM2 miRanda miRanda
14034 chr3 127788633 127788633 1 + C G rs560436975 127788652 + 127788632 127788672 41 TCCACTGTGTAAAGTGCTAGACATTTTCCAATTTAAAATTT TGCACTGTGTAAAGTGCTAGACATTTTCCAATTTAAAATTT < 41bp 1 0.727449889621326 1 0.963238716125488 experiment 0.545100220757347 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 SEC61A1 ENSG00000058262 UTR3 Human protein_coding chr3:127788652 chr3:127788633 . . 0 hm6A_associated_SNPs_5938 0 0 1 1 127788621 127788641 mRNA hsa-miR-128 SEC61A1 miRanda miRanda
14034 chr3 127789373 127789373 1 + A G rs534143695 127789371 + 127789351 127789391 41 GACATTGTGGTAGCTATCAGACATGGACAGAAACTGACTTA GACATTGTGGTAGCTATCAGACGTGGACAGAAACTGACTTA Direct Loss 1 0.540882036982307 1 0.938246250152588 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 SEC61A1 ENSG00000058262 UTR3 Human protein_coding chr3:127789371 chr3:127789373 . . 0 hm6A_associated_SNPs_5943 0 0 1 1 127789366 127789389 mRNA hsa-miR-223 SEC61A1 miRanda miRanda
14034 chr3 127789373 127789373 1 + A G rs534143695 127789377 + 127789357 127789397 41 GTGGTAGCTATCAGACATGGACAGAAACTGACTTAGTGCTC GTGGTAGCTATCAGACGTGGACAGAAACTGACTTAGTGCTC < 41bp 1 0.69113914848278 1 0.96991103887558 experiment 0.617721703034439 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 SEC61A1 ENSG00000058262 UTR3 Human protein_coding chr3:127789377 chr3:127789373 . . 0 hm6A_associated_SNPs_5944 0 0 1 1 127789366 127789389 mRNA hsa-miR-223 SEC61A1 miRanda miRanda
14034 chr3 127789373 127789373 1 + A G rs534143695 127789383 + 127789363 127789403 41 GCTATCAGACATGGACAGAAACTGACTTAGTGCTCACAAGC GCTATCAGACGTGGACAGAAACTGACTTAGTGCTCACAAGC < 41bp 1 0.479218331257711 1 0.943216383457184 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 SEC61A1 ENSG00000058262 UTR3 Human protein_coding chr3:127789383 chr3:127789373 . . 0 hm6A_associated_SNPs_5945 0 0 1 1 127789366 127789389 mRNA hsa-miR-223 SEC61A1 miRanda miRanda
14034 chr3 127789373 127789373 1 + A G rs534143695 127789387 + 127789367 127789407 41 TCAGACATGGACAGAAACTGACTTAGTGCTCACAAGCCCCT TCAGACGTGGACAGAAACTGACTTAGTGCTCACAAGCCCCT < 41bp 1 0.639141812295012 1 0.926473617553711 experiment 0.721716375409977 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 7 SEC61A1 ENSG00000058262 UTR3 Human protein_coding chr3:127789387 chr3:127789373 . . 0 hm6A_associated_SNPs_5946 0 0 1 1 127789366 127789389 mRNA hsa-miR-223 SEC61A1 miRanda miRanda
14034 chr3 128533624 128533624 1 + T C rs147938224 128533628 + 128533608 128533648 41 CGCAATGCCAATAAAATTGAACAAGAACAATGATCATCTGC CGCAATGCCAATAAAACTGAACAAGAACAATGATCATCTGC < 41bp 1 0.425851202789965 1 0.655372858047485 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 17 RAB7A ENSG00000075785 UTR3 Human protein_coding chr3:128533628 chr3:128533624 . . 0 hm6A_associated_SNPs_5959 0 0 1 1 128533604 128533626 mRNA hsa-miR-590-3p RAB7A miRanda miRanda
14034 chr3 132396072 132396072 1 + C T rs557842029 132396075 + 132396055 132396095 41 TAAATTATATTCTGCACCGAACAAGGAACAGAAATTATTGC TAAATTATATTCTGCACTGAACAAGGAACAGAAATTATTGC < 41bp 1 0.487376960147078 1 0.1176797747612 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 NPHP3-ACAD11 ENSG00000081307 UTR3 Human protein_coding chr3:132396075 chr3:132396072 . . 0 hm6A_associated_SNPs_5981 0 0 1 2 132396049 132396072 mRNA hsa-miR-19a UBA5 miRanda miRanda
14034 chr3 132396072 132396072 1 + C T rs557842029 132396075 + 132396055 132396095 41 TAAATTATATTCTGCACCGAACAAGGAACAGAAATTATTGC TAAATTATATTCTGCACTGAACAAGGAACAGAAATTATTGC < 41bp 1 0.487376960147078 1 0.1176797747612 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 NPHP3-ACAD11 ENSG00000081307 UTR3 Human protein_coding chr3:132396075 chr3:132396072 . . 0 hm6A_associated_SNPs_5981 0 0 1 2 132396057 132396079 mRNA hsa-miR-375 UBA5 miRanda miRanda
14034 chr3 133306938 133306938 1 + C A rs201232734 133306921 + 133306901 133306941 41 TTGCTAACCCTTCTGAGGTAACTAGACTGCAGCTAACCACC TTGCTAACCCTTCTGAGGTAACTAGACTGCAGCTAACAACC < 41bp 1 0.633333683096403 1 0.900178372859955 experiment 0.733332633807195 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133306921 chr3:133306938 . . 0 hm6A_associated_SNPs_5984 0 0 1 1 133306925 133306950 mRNA hsa-miR-9 CDV3 miRanda miRanda
14034 chr3 133306938 133306938 1 + C A rs201232734 133306926 + 133306906 133306946 41 AACCCTTCTGAGGTAACTAGACTGCAGCTAACCACCACCAA AACCCTTCTGAGGTAACTAGACTGCAGCTAACAACCACCAA < 41bp 1 0.758037457829641 1 0.968367278575897 experiment 0.483925084340717 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 33 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133306926 chr3:133306938 . . 0 hm6A_associated_SNPs_5985 0 0 1 1 133306925 133306950 mRNA hsa-miR-9 CDV3 miRanda miRanda
14034 chr3 133307020 133307020 1 + A G rs574319565 133307011 + 133306991 133307031 41 GCAGACCACTCGATTTCATGACCGGCCCTATTGCACTATGG GCAGACCACTCGATTTCATGACCGGCCCTGTTGCACTATGG < 41bp 1 0.298420490447291 1 0.968095123767853 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133307011 chr3:133307020 . . 0 hm6A_associated_SNPs_5986 0 0 1 5 133307007 133307028 mRNA hsa-miR-130a CDV3 miRanda miRanda
14034 chr3 133307020 133307020 1 + A G rs574319565 133307011 + 133306991 133307031 41 GCAGACCACTCGATTTCATGACCGGCCCTATTGCACTATGG GCAGACCACTCGATTTCATGACCGGCCCTGTTGCACTATGG < 41bp 1 0.298420490447291 1 0.968095123767853 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133307011 chr3:133307020 . . 0 hm6A_associated_SNPs_5986 0 0 1 5 133307005 133307028 mRNA hsa-miR-301a CDV3 miRanda miRanda
14034 chr3 133307020 133307020 1 + A G rs574319565 133307011 + 133306991 133307031 41 GCAGACCACTCGATTTCATGACCGGCCCTATTGCACTATGG GCAGACCACTCGATTTCATGACCGGCCCTGTTGCACTATGG < 41bp 1 0.298420490447291 1 0.968095123767853 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133307011 chr3:133307020 . . 0 hm6A_associated_SNPs_5986 0 0 1 5 133307007 133307028 mRNA hsa-miR-130b CDV3 miRanda miRanda
14034 chr3 133307020 133307020 1 + A G rs574319565 133307011 + 133306991 133307031 41 GCAGACCACTCGATTTCATGACCGGCCCTATTGCACTATGG GCAGACCACTCGATTTCATGACCGGCCCTGTTGCACTATGG < 41bp 1 0.298420490447291 1 0.968095123767853 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133307011 chr3:133307020 . . 0 hm6A_associated_SNPs_5986 0 0 1 5 133307006 133307028 mRNA hsa-miR-454 CDV3 miRanda miRanda
14034 chr3 133307020 133307020 1 + A G rs574319565 133307011 + 133306991 133307031 41 GCAGACCACTCGATTTCATGACCGGCCCTATTGCACTATGG GCAGACCACTCGATTTCATGACCGGCCCTGTTGCACTATGG < 41bp 1 0.298420490447291 1 0.968095123767853 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133307011 chr3:133307020 . . 0 hm6A_associated_SNPs_5986 0 0 1 5 133307005 133307028 mRNA hsa-miR-301b CDV3 miRanda miRanda
14034 chr3 133308781 133308781 1 + G C rs78606932 133308778 + 133308758 133308798 41 AAAAATCTCTTCATCGTTGAACTGTGCATTTTCCCTGCATT AAAAATCTCTTCATCGTTGAACTCTGCATTTTCCCTGCATT < 41bp 1 0.342293219324872 1 0.947919368743896 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133308778 chr3:133308781 . . 0 hm6A_associated_SNPs_5992 0 0 1 1 133308761 133308783 mRNA hsa-miR-181a CDV3 miRanda miRanda
14034 chr3 133538738 133538738 1 + A G rs576103900 133538735 + 133538715 133538755 41 AACATTTCTTTGTTCTGGAAACAAAGTACTGTTGAAACCAG AACATTTCTTTGTTCTGGAAACAGAGTACTGTTGAAACCAG < 41bp 1 0.501353334111955 1 0.0486858189105988 experiment 0.99729333177609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133538735 chr3:133538738 . . 0 hm6A_associated_SNPs_6000 0 0 1 2 133538727 133538747 mRNA hsa-miR-101 SRPRB miRanda miRanda
14034 chr3 133538738 133538738 1 + A G rs576103900 133538735 + 133538715 133538755 41 AACATTTCTTTGTTCTGGAAACAAAGTACTGTTGAAACCAG AACATTTCTTTGTTCTGGAAACAGAGTACTGTTGAAACCAG < 41bp 1 0.501353334111955 1 0.0486858189105988 experiment 0.99729333177609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133538735 chr3:133538738 . . 0 hm6A_associated_SNPs_6000 0 0 1 2 133538727 133538750 mRNA hsa-miR-421 SRPRB miRanda miRanda
14034 chr3 133539175 133539175 1 + T C rs113943912 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATCAGCTCAGTGACTTGTCCACACTCGTCTTAG < 41bp 1 0.328065128551548 1 0.153038620948792 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539175 . . 0 hm6A_associated_SNPs_6001 0 0 1 1 133539167 133539189 mRNA hsa-miR-224 SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539184 133539205 mRNA hsa-miR-208a SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539188 133539211 mRNA hsa-miR-302a SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539189 133539211 mRNA hsa-miR-302b SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539189 133539211 mRNA hsa-miR-302c SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539189 133539211 mRNA hsa-miR-302d SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539189 133539211 mRNA hsa-miR-372 SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539186 133539211 mRNA hsa-miR-373 SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539191 133539211 mRNA hsa-miR-520e SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539190 133539211 mRNA hsa-miR-520a-3p SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539191 133539211 mRNA hsa-miR-520b SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539190 133539211 mRNA hsa-miR-520c-3p SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539190 133539211 mRNA hsa-miR-520d-3p SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539184 133539205 mRNA hsa-miR-208b SRPRB miRanda miRanda
14034 chr3 133539196 133539196 1 + C T rs59518639 133539185 + 133539165 133539205 41 TATTCTTCATTAGCTCAGTGACTTGTCCACACTCGTCTTAG TATTCTTCATTAGCTCAGTGACTTGTCCACATTCGTCTTAG < 41bp 1 0.284794349038478 1 0.106285095214844 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539185 chr3:133539196 . . 0 hm6A_associated_SNPs_6002 0 0 1 14 133539195 133539211 mRNA hsa-miR-302e SRPRB miRanda miRanda
14034 chr3 139065804 139065804 1 + A G rs141901815 139065815 + 139065795 139065835 41 CAGGCTTGAACTTGCAGAAGACTTTTAAGCCAGCTATACAA CAGGCTTGAGCTTGCAGAAGACTTTTAAGCCAGCTATACAA < 41bp 1 0.742859203070201 1 0.865080595016479 experiment 0.514281593859598 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065815 chr3:139065804 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_6012 0 0 1 1 139065792 139065814 mRNA hsa-miR-544 MRPS22 miRanda miRanda
14034 chr3 140286479 140286479 1 + C T rs16850550 140286467 + 140286447 140286487 41 AGGCAAGAATTAGGGCCTTGACAGAATTTCCACGAAGCTCT AGGCAAGAATTAGGGCCTTGACAGAATTTCCATGAAGCTCT < 41bp 1 0.0373298527563678 1 0.106956630945206 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 33 CLSTN2 ENSG00000158258 UTR3 Human protein_coding chr3:140286467 chr3:140286479 . . 0 hm6A_associated_SNPs_6015 0 0 0 1 140286478 140286503 mRNA hsa-miR-495 CLSTN2 miRanda miRanda
14034 chr3 140696799 140696799 1 + C A rs9829128 140696813 + 140696793 140696833 41 TGGTCACGTATTAGGCAGAAACAGTGTTCATAACATTTTTC TGGTCAAGTATTAGGCAGAAACAGTGTTCATAACATTTTTC < 41bp 1 0.213311760895836 1 0.255028605461121 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 SLC25A36 ENSG00000114120 UTR3 Human protein_coding chr3:140696813 chr3:140696799 . . 0 hm6A_associated_SNPs_6021 0 0 1 2 140696798 140696821 mRNA hsa-miR-141 SLC25A36 miRanda miRanda
14034 chr3 140696799 140696799 1 + C A rs9829128 140696813 + 140696793 140696833 41 TGGTCACGTATTAGGCAGAAACAGTGTTCATAACATTTTTC TGGTCAAGTATTAGGCAGAAACAGTGTTCATAACATTTTTC < 41bp 1 0.213311760895836 1 0.255028605461121 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 SLC25A36 ENSG00000114120 UTR3 Human protein_coding chr3:140696813 chr3:140696799 . . 0 hm6A_associated_SNPs_6021 0 0 1 2 140696797 140696821 mRNA hsa-miR-200a SLC25A36 miRanda miRanda
14034 chr3 140698140 140698140 1 + A G rs186711703 140698133 + 140698113 140698153 41 GCTCTATTACTGGGTTACAGACATTTCAGCATTTTTAGGTT GCTCTATTACTGGGTTACAGACATTTCGGCATTTTTAGGTT < 41bp 1 0.331809754564125 1 0.0106416046619415 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 SLC25A36 ENSG00000114120 UTR3 Human protein_coding chr3:140698133 chr3:140698140 . . 0 hm6A_associated_SNPs_6026 0 0 1 1 140698120 140698141 mRNA hsa-miR-203 SLC25A36 miRanda miRanda
14034 chr3 141165812 141165812 1 + T C rs544163159 141165822 + 141165802 141165842 41 TGGGGGTCTATTCCAGACAGACTTAAGGGCTCAAGTGGAAC TGGGGGTCTACTCCAGACAGACTTAAGGGCTCAAGTGGAAC < 41bp 1 0.425222890161541 1 0.720463216304779 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 ZBTB38 ENSG00000177311 UTR3 Human protein_coding chr3:141165822 chr3:141165812 . . 0 hm6A_associated_SNPs_6031 0 0 1 1 141165804 141165826 mRNA hsa-miR-382 ZBTB38 miRanda miRanda
14034 chr3 141166528 141166528 1 + A G rs61744772 141166538 + 141166518 141166558 41 GTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAG GTGAAGAAGTGGCTCAAAGGACTCCGGTTTCTGTCTACAAG < 41bp 1 0.544951119059857 1 0.962698817253113 experiment 0.910097761880285 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 ZBTB38 ENSG00000177311 UTR3 Human protein_coding chr3:141166538 chr3:141166528 . . 0 hm6A_associated_SNPs_6034 0 0 1 1 141166523 141166544 mRNA hsa-miR-127-3p ZBTB38 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459971 148459992 mRNA hsa-miR-155 AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459946 148459973 mRNA hsa-miR-302a AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459946 148459973 mRNA hsa-miR-302b AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459951 148459973 mRNA hsa-miR-302c AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459951 148459973 mRNA hsa-miR-302d AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459951 148459973 mRNA hsa-miR-372 AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459951 148459973 mRNA hsa-miR-373 AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459953 148459973 mRNA hsa-miR-520e AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459952 148459973 mRNA hsa-miR-520a-3p AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459953 148459973 mRNA hsa-miR-520b AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459952 148459973 mRNA hsa-miR-520c-3p AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459952 148459973 mRNA hsa-miR-520d-3p AGTR1 miRanda miRanda
14034 chr3 148459972 148459972 1 + T G rs5185 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTGCA < 41bp 1 0.11142839991463 1 0.947881877422333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459972 . . 0 hm6A_associated_SNPs_6053 1 0 0 13 148459957 148459973 mRNA hsa-miR-302e AGTR1 miRanda miRanda
14034 chr3 148459974 148459974 1 + A G rs370981786 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCG < 41bp 1 0.115230054196018 1 0.959700882434845 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 41 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459974 . . 0 hm6A_associated_SNPs_6054 0 0 0 2 148459971 148459992 mRNA hsa-miR-155 AGTR1 miRanda miRanda
14034 chr3 148459974 148459974 1 + A G rs370981786 148459954 + 148459934 148459974 41 GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCA GTGAAAGAAGGAGCAAGAGAACATTCCTCTGCAGCACTTCG < 41bp 1 0.115230054196018 1 0.959700882434845 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 41 AGTR1 ENSG00000144891 UTR3 Human protein_coding chr3:148459954 chr3:148459974 . . 0 hm6A_associated_SNPs_6054 0 0 0 2 148459973 148459999 mRNA hsa-miR-520d-3p AGTR1 miRanda miRanda
14034 chr3 148745236 148745236 1 + A C rs3347 148745224 + 148745204 148745244 41 CACTGCTGAGTGATTCATAAACATATCAACCAATAGCATTA CACTGCTGAGTGATTCATAAACATATCAACCACTAGCATTA < 41bp 1 0.334406517067782 1 0.0136623978614807 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 GYG1 ENSG00000163754 UTR3 Human protein_coding chr3:148745224 chr3:148745236 . . 0 hm6A_associated_SNPs_6057 0 0 1 1 148745222 148745245 mRNA hsa-miR-155 GYG1 miRanda miRanda
14034 chr3 148880653 148880653 1 + A G rs370137287 148880651 + 148880631 148880671 41 CTGACACCACACCATTGCGAACATCGGAGGATCTGGTAAGA CTGACACCACACCATTGCGAACGTCGGAGGATCTGGTAAGA Direct Loss 1 0.201878776635748 1 0.455148100852966 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148880651 chr3:148880653 synonymous SNV . 0 hm6A_associated_SNPs_6060 0 0 1 1 148880649 148880665 mRNA hsa-miR-361-5p HPS3 miRanda miRanda
14034 chr3 148890420 148890420 1 - A T rs188137938 148890414 - 148890394 148890434 41 AAATTCTGGACCAGTTAGTGACATTCTTTCAAGCATACTTG AAATTCTGGACCAGATAGTGACATTCTTTCAAGCATACTTG < 41bp 1 0.377112447217834 1 0.875410437583923 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 CP;HPS3 ENSG00000047457;ENSG00000163755 UTR3 Human other chr3:148890414 chr3:148890420 . . 0 hm6A_associated_SNPs_6062 2 0 0 1 148890405 148890427 mRNA hsa-miR-186 CP miRanda miRanda
14034 chr3 150346979 150346979 1 + G A rs542979967 150346982 + 150346962 150347002 41 TGTGATAGCTTCAAGGTGGAACATACTGTAATCTCCAGATG TGTGATAGCTTCAAGGTAGAACATACTGTAATCTCCAGATG < 41bp 1 0.130179966151763 1 0.00222289562225342 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 SELENOT ENSG00000198843 UTR3 Human protein_coding chr3:150346982 chr3:150346979 . . 0 hm6A_associated_SNPs_6071 0 0 1 1 150346972 150346991 mRNA hsa-miR-144 SELT miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGTACATCACGCAACT < 41bp 1 0.18294166342311 1 0.97848379611969 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502073 . . 0 hm6A_associated_SNPs_6077 0 0 0 5 151502056 151502079 mRNA hsa-miR-17 LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGTACATCACGCAACT < 41bp 1 0.18294166342311 1 0.97848379611969 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502073 . . 0 hm6A_associated_SNPs_6077 0 0 0 5 151502056 151502079 mRNA hsa-miR-20a LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGTACATCACGCAACT < 41bp 1 0.18294166342311 1 0.97848379611969 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502073 . . 0 hm6A_associated_SNPs_6077 0 0 0 5 151502056 151502079 mRNA hsa-miR-93 LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGTACATCACGCAACT < 41bp 1 0.18294166342311 1 0.97848379611969 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502073 . . 0 hm6A_associated_SNPs_6077 0 0 0 5 151502056 151502079 mRNA hsa-miR-106a LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGTACATCACGCAACT < 41bp 1 0.18294166342311 1 0.97848379611969 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502073 . . 0 hm6A_associated_SNPs_6077 0 0 0 5 151502056 151502079 mRNA hsa-miR-20b LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCAACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0720822683530233 1 0.946379899978638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502073 . . 0 hm6A_associated_SNPs_6078 0 0 0 5 151502056 151502079 mRNA hsa-miR-17 LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCAACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0720822683530233 1 0.946379899978638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502073 . . 0 hm6A_associated_SNPs_6078 0 0 0 5 151502056 151502079 mRNA hsa-miR-20a LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCAACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0720822683530233 1 0.946379899978638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502073 . . 0 hm6A_associated_SNPs_6078 0 0 0 5 151502056 151502079 mRNA hsa-miR-93 LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCAACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0720822683530233 1 0.946379899978638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502073 . . 0 hm6A_associated_SNPs_6078 0 0 0 5 151502056 151502079 mRNA hsa-miR-106a LOC201651 miRanda miRanda
14034 chr3 151502073 151502073 1 + G A rs116729252 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCAACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0720822683530233 1 0.946379899978638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 12 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502073 . . 0 hm6A_associated_SNPs_6078 0 0 0 5 151502056 151502079 mRNA hsa-miR-20b LOC201651 miRanda miRanda
14034 chr3 151502077 151502077 1 + T G rs1401967 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCGACTGTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.061251517247103 1 0.951607227325439 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502077 . . 0 hm6A_associated_SNPs_6079 0 0 0 5 151502056 151502079 mRNA hsa-miR-17 LOC201651 miRanda miRanda
14034 chr3 151502077 151502077 1 + T G rs1401967 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCGACTGTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.061251517247103 1 0.951607227325439 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502077 . . 0 hm6A_associated_SNPs_6079 0 0 0 5 151502056 151502079 mRNA hsa-miR-20a LOC201651 miRanda miRanda
14034 chr3 151502077 151502077 1 + T G rs1401967 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCGACTGTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.061251517247103 1 0.951607227325439 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502077 . . 0 hm6A_associated_SNPs_6079 0 0 0 5 151502056 151502079 mRNA hsa-miR-93 LOC201651 miRanda miRanda
14034 chr3 151502077 151502077 1 + T G rs1401967 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCGACTGTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.061251517247103 1 0.951607227325439 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502077 . . 0 hm6A_associated_SNPs_6079 0 0 0 5 151502056 151502079 mRNA hsa-miR-106a LOC201651 miRanda miRanda
14034 chr3 151502077 151502077 1 + T G rs1401967 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GTACATCACGCGACTGTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.061251517247103 1 0.951607227325439 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502077 . . 0 hm6A_associated_SNPs_6079 0 0 0 5 151502056 151502079 mRNA hsa-miR-20b LOC201651 miRanda miRanda
14034 chr3 152017872 152017872 1 + G A rs180834822 152017876 + 152017856 152017896 41 GGGAAAAGTATTTTGAGGGGACATTTTCATCATCAGTTCAG GGGAAAAGTATTTTGAAGGGACATTTTCATCATCAGTTCAG < 41bp 1 0.336977178269331 1 0.91341507434845 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 MBNL1 ENSG00000152601 UTR5 Human protein_coding chr3:152017876 chr3:152017872 . . 0 hm6A_associated_SNPs_6080 0 0 1 1 152017859 152017881 mRNA hsa-miR-365 MBNL1 miRanda miRanda
14034 chr3 152018077 152018077 1 + C T rs185894411 152018058 + 152018038 152018078 41 GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACACG GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACATG < 41bp 1 0.548347203508881 1 0.898362636566162 experiment 0.903305592982238 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018058 chr3:152018077 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_6081 0 0 1 3 152018073 152018095 mRNA hsa-miR-19a MBNL1 miRanda miRanda
14034 chr3 152018077 152018077 1 + C T rs185894411 152018058 + 152018038 152018078 41 GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACACG GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACATG < 41bp 1 0.548347203508881 1 0.898362636566162 experiment 0.903305592982238 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018058 chr3:152018077 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_6081 0 0 1 3 152018073 152018095 mRNA hsa-miR-19b MBNL1 miRanda miRanda
14034 chr3 152018077 152018077 1 + C T rs185894411 152018058 + 152018038 152018078 41 GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACACG GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACATG < 41bp 1 0.548347203508881 1 0.898362636566162 experiment 0.903305592982238 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018058 chr3:152018077 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_6081 0 0 1 3 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr3 152018077 152018077 1 + C T rs185894411 152018074 + 152018054 152018094 41 GGGGACTTGCTCACGGCCAGACACGGAATGTAAATTTGCAC GGGGACTTGCTCACGGCCAGACATGGAATGTAAATTTGCAC < 41bp 1 0.762660278204609 1 0.843908190727234 experiment 0.474679443590782 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 24 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018074 chr3:152018077 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_6082 0 0 1 3 152018073 152018095 mRNA hsa-miR-19a MBNL1 miRanda miRanda
14034 chr3 152018077 152018077 1 + C T rs185894411 152018074 + 152018054 152018094 41 GGGGACTTGCTCACGGCCAGACACGGAATGTAAATTTGCAC GGGGACTTGCTCACGGCCAGACATGGAATGTAAATTTGCAC < 41bp 1 0.762660278204609 1 0.843908190727234 experiment 0.474679443590782 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 24 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018074 chr3:152018077 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_6082 0 0 1 3 152018073 152018095 mRNA hsa-miR-19b MBNL1 miRanda miRanda
14034 chr3 152018077 152018077 1 + C T rs185894411 152018074 + 152018054 152018094 41 GGGGACTTGCTCACGGCCAGACACGGAATGTAAATTTGCAC GGGGACTTGCTCACGGCCAGACATGGAATGTAAATTTGCAC < 41bp 1 0.762660278204609 1 0.843908190727234 experiment 0.474679443590782 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 24 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018074 chr3:152018077 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_6082 0 0 1 3 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr3 152881527 152881527 1 + G A rs114982917 152881533 + 152881513 152881553 41 ATGGAAGGAAGTCCGGGAGAACCATATGAAGGAGCAGGAGG ATGGAAGGAAGTCCAGGAGAACCATATGAAGGAGCAGGAGG < 41bp 1 0.514095249359336 1 0.98811799287796 experiment 0.971809501281328 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 RAP2B ENSG00000181467 UTR3 Human protein_coding chr3:152881533 chr3:152881527 . . 0 hm6A_associated_SNPs_6093 0 0 1 1 152881519 152881545 mRNA hsa-miR-205 RAP2B miRanda miRanda
14034 chr3 154899844 154899844 1 + G A rs7610758 154899828 + 154899808 154899848 41 GTAGCCAGCACCTGTAAGAAACAGAGCAGTACCAGCGCTCT GTAGCCAGCACCTGTAAGAAACAGAGCAGTACCAGCACTCT < 41bp 1 0.038037116258781 1 0.0320447981357574 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 37 MME ENSG00000240666 ncRNA_intronic Human antisense chr3:154899828 chr3:154899844 . . 0 hm6A_associated_SNPs_6098 0 0 0 1 154899844 154899869 mRNA hsa-miR-454 MME miRanda miRanda
14034 chr3 158369983 158369983 1 + A G rs115984741 158369981 + 158369961 158370001 41 TGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCT TGTGTTGCCAATTCAGATGAACGGCTTGGTGAGATGTTTCT Direct Loss 1 0.349304681335896 1 0.649382889270782 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 23 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158369981 chr3:158369983 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_6102 0 0 1 2 158369981 158370001 mRNA hsa-miR-494 GFM1 miRanda miRanda
14034 chr3 158369983 158369983 1 + A G rs115984741 158369981 + 158369961 158370001 41 TGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCT TGTGTTGCCAATTCAGATGAACGGCTTGGTGAGATGTTTCT Direct Loss 1 0.349304681335896 1 0.649382889270782 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 23 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158369981 chr3:158369983 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_6102 0 0 1 2 158369977 158369999 mRNA hsa-miR-543 GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409250 158409272 mRNA hsa-miR-26a GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409251 158409272 mRNA hsa-miR-26b GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409251 158409272 mRNA hsa-miR-27a GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409257 158409272 mRNA hsa-miR-27a GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409259 158409282 mRNA hsa-miR-223 GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409251 158409272 mRNA hsa-miR-27b GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409257 158409272 mRNA hsa-miR-27b GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409257 158409273 mRNA hsa-miR-342-3p GFM1 miRanda miRanda
14034 chr3 158409262 158409262 1 + C T rs1047355 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAAGGAAAAGCCAAGAACTAACTTTGTTTACTGTGAGTTGA < 41bp 1 0.773382044702648 1 0.859737396240234 experiment 0.453235910594705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 GFM1 ENSG00000168827 UTR3 Human protein_coding chr3:158409256 chr3:158409262 . . 0 hm6A_associated_SNPs_6103 1 0 1 9 158409257 158409278 mRNA hsa-miR-505 GFM1 miRanda miRanda
14034 chr3 158547026 158547026 1 + C T rs113683331 158547025 + 158547005 158547045 41 GGTTAGAAAATTGCTGTGGAACATCCAGGTGAACTTCAGGA GGTTAGAAAATTGCTGTGGAATATCCAGGTGAACTTCAGGA Direct Loss 1 0.380600884795733 1 0.162596434354782 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 MFSD1 ENSG00000118855 UTR3 Human protein_coding chr3:158547025 chr3:158547026 . . 0 hm6A_associated_SNPs_6104 0 0 1 1 158547019 158547041 mRNA hsa-miR-224 MFSD1 miRanda miRanda
14034 chr3 158547026 158547026 1 + C T rs113683331 158547037 + 158547017 158547057 41 GCTGTGGAACATCCAGGTGAACTTCAGGAAAGACAGTGAAA GCTGTGGAATATCCAGGTGAACTTCAGGAAAGACAGTGAAA < 41bp 1 0.465157922011431 1 0.612367033958435 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MFSD1 ENSG00000118855 UTR3 Human protein_coding chr3:158547037 chr3:158547026 . . 0 hm6A_associated_SNPs_6105 0 0 1 1 158547019 158547041 mRNA hsa-miR-224 MFSD1 miRanda miRanda
14034 chr3 160152014 160152014 1 + A G rs77573017 160152011 + 160151991 160152031 41 CACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACC CACTTAGCTTGCCAGTTGAGACAGTCACCACAGTTATTACC < 41bp 1 0.301586369588504 1 0.341895282268524 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 24 SMC4 ENSG00000113810;ENSG00000213186 UTR3 Human other chr3:160152011 chr3:160152014 . . 0 hm6A_associated_SNPs_6116 0 0 1 1 160151995 160152017 mRNA hsa-miR-219-5p SMC4 miRanda miRanda
14034 chr3 160395906 160395906 1 + C G rs16831340 160395895 + 160395875 160395915 41 ATATTTATTTTCAGCCAGGAACTTTAGCAAACTGTGGCAAT ATATTTATTTTCAGCCAGGAACTTTAGCAAAGTGTGGCAAT < 41bp 1 0.0572401012387506 1 0.984682321548462 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 ARL14 ENSG00000179674 UTR3 Human protein_coding chr3:160395895 chr3:160395906 . . 0 hm6A_associated_SNPs_6120 0 0 0 1 160395891 160395916 mRNA hsa-miR-32 ARL14 miRanda miRanda
14034 chr3 160395906 160395906 1 + C G rs16831340 160395905 + 160395885 160395925 41 TCAGCCAGGAACTTTAGCAAACTGTGGCAATGATCACTGGG TCAGCCAGGAACTTTAGCAAAGTGTGGCAATGATCACTGGG Direct Loss 1 0.0300802006880168 1 0.973779439926147 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ARL14 ENSG00000179674 UTR3 Human protein_coding chr3:160395905 chr3:160395906 . . 0 hm6A_associated_SNPs_6121 0 0 0 1 160395891 160395916 mRNA hsa-miR-32 ARL14 miRanda miRanda
14034 chr3 170022758 170022758 1 + T C rs138385075 170022771 + 170022751 170022791 41 TACTCTCTTTCCTTCAAATAACATAAGTCTGAAAGCAATGA TACTCTCCTTCCTTCAAATAACATAAGTCTGAAAGCAATGA < 41bp 1 0.0970769448539594 1 0.0451671779155731 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 PRKCI ENSG00000163558 UTR3 Human protein_coding chr3:170022771 chr3:170022758 . . 0 hm6A_associated_SNPs_6139 0 0 1 1 170022739 170022758 mRNA hsa-miR-202 PRKCI miRanda miRanda
14034 chr3 172115267 172115267 1 + C T rs569866127 172115276 + 172115256 172115296 41 AATGAAGTAAACCCAACAAAACTAGAGGTATGAATTAATGC AATGAAGTAAATCCAACAAAACTAGAGGTATGAATTAATGC < 41bp 1 0.463397516116776 1 0.894854605197906 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 12 FNDC3B ENSG00000075420 UTR3 Human protein_coding chr3:172115276 chr3:172115267 . . 0 hm6A_associated_SNPs_6147 0 0 1 1 172115266 172115287 mRNA hsa-miR-875-5p FNDC3B miRanda miRanda
14034 chr3 172115902 172115902 1 + G A rs12897 172115886 + 172115866 172115906 41 CTGTATTTCTTATAATTTTAACACTATGAGCTGCCTGTATA CTGTATTTCTTATAATTTTAACACTATGAGCTGCCTATATA < 41bp 1 0.357229862468723 1 0.0718647539615631 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 FNDC3B ENSG00000075420 UTR3 Human protein_coding chr3:172115886 chr3:172115902 . . 0 hm6A_associated_SNPs_6149 0 1 1 1 172115880 172115902 mRNA hsa-miR-28-5p FNDC3B miRanda miRanda
14034 chr3 172538065 172538065 1 + C T rs76864072 172538064 + 172538044 172538084 41 TAAATTATAGAAATGTATAGACACCTCATACTCAAATAAGA TAAATTATAGAAATGTATAGATACCTCATACTCAAATAAGA Direct Loss 1 0.77885606824274 1 0.648509502410889 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 22 ECT2 ENSG00000114346 UTR3 Human protein_coding chr3:172538064 chr3:172538065 . . 0 hm6A_associated_SNPs_6152 0 0 1 1 172538056 172538077 mRNA hsa-miR-496 ECT2 miRanda miRanda
14034 chr3 173999206 173999206 1 + T G rs189988268 173999224 + 173999204 173999244 41 TGTGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA TGGGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA < 41bp 1 0.201905350989661 1 0.977678179740906 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 NLGN1 ENSG00000169760 UTR3 Human protein_coding chr3:173999224 chr3:173999206 . . 0 hm6A_associated_SNPs_6155 0 0 0 4 173999189 173999209 mRNA hsa-miR-23a NLGN1 miRanda miRanda
14034 chr3 173999206 173999206 1 + T G rs189988268 173999224 + 173999204 173999244 41 TGTGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA TGGGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA < 41bp 1 0.201905350989661 1 0.977678179740906 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 NLGN1 ENSG00000169760 UTR3 Human protein_coding chr3:173999224 chr3:173999206 . . 0 hm6A_associated_SNPs_6155 0 0 0 4 173999189 173999209 mRNA hsa-miR-23b NLGN1 miRanda miRanda
14034 chr3 173999206 173999206 1 + T G rs189988268 173999224 + 173999204 173999244 41 TGTGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA TGGGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA < 41bp 1 0.201905350989661 1 0.977678179740906 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 NLGN1 ENSG00000169760 UTR3 Human protein_coding chr3:173999224 chr3:173999206 . . 0 hm6A_associated_SNPs_6155 0 0 0 4 173999196 173999220 mRNA hsa-miR-190 NLGN1 miRanda miRanda
14034 chr3 173999206 173999206 1 + T G rs189988268 173999224 + 173999204 173999244 41 TGTGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA TGGGAATATACATATCAAGAACTTTGGGGGTTTTGAAAAAA < 41bp 1 0.201905350989661 1 0.977678179740906 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 NLGN1 ENSG00000169760 UTR3 Human protein_coding chr3:173999224 chr3:173999206 . . 0 hm6A_associated_SNPs_6155 0 0 0 4 173999203 173999220 mRNA hsa-miR-190b NLGN1 miRanda miRanda
14034 chr3 179052473 179052473 1 + C T rs78092037 179052489 + 179052469 179052509 41 ATTTCATGAATTGAAAAGAAACAAATGTATTGAAGAAGTGA ATTTTATGAATTGAAAAGAAACAAATGTATTGAAGAAGTGA < 41bp 1 0.45512578999656 1 0.0219644010066986 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 ZNF639 ENSG00000121864 UTR3 Human protein_coding chr3:179052489 chr3:179052473 . . 0 hm6A_associated_SNPs_6157 0 0 1 1 179052457 179052478 mRNA hsa-miR-433 ZNF639 miRanda miRanda
14034 chr3 179110627 179110627 1 + C T rs540245365 179110607 + 179110587 179110627 41 GTCTGAATTTTGAATGATAAACAGTGATGTTTTAAAAAAGC GTCTGAATTTTGAATGATAAACAGTGATGTTTTAAAAAAGT < 41bp 1 0.300553921189742 1 0.0163112580776215 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 41 MFN1 ENSG00000171109 UTR3 Human protein_coding chr3:179110607 chr3:179110627 . . 0 hm6A_associated_SNPs_6160 0 0 1 1 179110627 179110649 mRNA hsa-miR-365 MFN1 miRanda miRanda
14034 chr3 179502067 179502067 1 + C T rs568611709 179502073 + 179502053 179502093 41 TTAAAGAGCACGATCAGTTGACACCTTCTGAAATAGAACTG TTAAAGAGCACGATTAGTTGACACCTTCTGAAATAGAACTG < 41bp 1 0.320260830731898 1 0.894918024539948 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 USP13 ENSG00000058056 UTR3 Human protein_coding chr3:179502073 chr3:179502067 . . 0 hm6A_associated_SNPs_6162 0 0 1 1 179502054 179502080 mRNA hsa-miR-18b USP13 miRanda miRanda
14034 chr3 181431403 181431403 1 + G A rs181132204 181431413 + 181431393 181431433 41 TGGGGAGGGCGGGGGAATGGACCTTGTATAGATCTGGAGGA TGGGGAGGGCAGGGGAATGGACCTTGTATAGATCTGGAGGA < 41bp 1 0.555499557624514 1 0.990336716175079 experiment 0.889000884750973 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 11 SOX2-OT ENSG00000242808 ncRNA_intronic Human sense_overlapping chr3:181431413 chr3:181431403 . . 0 hm6A_associated_SNPs_6169 0 0 0 2 181431401 181431422 mRNA hsa-miR-381 SOX2 miRanda miRanda
14034 chr3 181431403 181431403 1 + G A rs181132204 181431413 + 181431393 181431433 41 TGGGGAGGGCGGGGGAATGGACCTTGTATAGATCTGGAGGA TGGGGAGGGCAGGGGAATGGACCTTGTATAGATCTGGAGGA < 41bp 1 0.555499557624514 1 0.990336716175079 experiment 0.889000884750973 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 11 SOX2-OT ENSG00000242808 ncRNA_intronic Human sense_overlapping chr3:181431413 chr3:181431403 . . 0 hm6A_associated_SNPs_6169 0 0 0 2 181431402 181431422 mRNA hsa-miR-300 SOX2 miRanda miRanda
14034 chr3 181431415 181431415 1 + C T rs564871416 181431413 + 181431393 181431433 41 TGGGGAGGGCGGGGGAATGGACCTTGTATAGATCTGGAGGA TGGGGAGGGCGGGGGAATGGACTTTGTATAGATCTGGAGGA < 41bp 1 0.79796099144185 1 0.997042536735535 experiment 0.404078017116299 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 SOX2-OT ENSG00000242808 ncRNA_intronic Human sense_overlapping chr3:181431413 chr3:181431415 . . 0 hm6A_associated_SNPs_6170 0 0 0 2 181431401 181431422 mRNA hsa-miR-381 SOX2 miRanda miRanda
14034 chr3 181431415 181431415 1 + C T rs564871416 181431413 + 181431393 181431433 41 TGGGGAGGGCGGGGGAATGGACCTTGTATAGATCTGGAGGA TGGGGAGGGCGGGGGAATGGACTTTGTATAGATCTGGAGGA < 41bp 1 0.79796099144185 1 0.997042536735535 experiment 0.404078017116299 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 SOX2-OT ENSG00000242808 ncRNA_intronic Human sense_overlapping chr3:181431413 chr3:181431415 . . 0 hm6A_associated_SNPs_6170 0 0 0 2 181431402 181431422 mRNA hsa-miR-300 SOX2 miRanda miRanda
14034 chr3 181457561 181457561 1 + C A rs186640755 181457575 + 181457555 181457595 41 ACAGTTCGAGTTCATCATAGACAATGAGCTGGCACCACAGT ACAGTTAGAGTTCATCATAGACAATGAGCTGGCACCACAGT < 41bp 1 0.544570152646807 1 0.770104587078094 experiment 0.910859694706387 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 7 SOX2-OT ENSG00000242808 ncRNA_exonic Human sense_overlapping chr3:181457575 chr3:181457561 . . 0 hm6A_associated_SNPs_6171 0 0 0 1 181457554 181457576 mRNA hsa-miR-433 SOX2OT miRanda miRanda
14034 chr3 183862859 183862859 1 + T C rs14955 183862841 + 183862821 183862861 41 TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCTGG TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCCGG < 41bp 1 0.60856363780524 1 0.958267331123352 experiment 0.78287272438952 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 EIF2B5 ENSG00000145191 UTR3 Human protein_coding chr3:183862841 chr3:183862859 . . 0 hm6A_associated_SNPs_6189 1 0 1 4 183862855 183862874 mRNA hsa-miR-200b EIF2B5 miRanda miRanda
14034 chr3 183862859 183862859 1 + T C rs14955 183862841 + 183862821 183862861 41 TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCTGG TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCCGG < 41bp 1 0.60856363780524 1 0.958267331123352 experiment 0.78287272438952 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 EIF2B5 ENSG00000145191 UTR3 Human protein_coding chr3:183862841 chr3:183862859 . . 0 hm6A_associated_SNPs_6189 1 0 1 4 183862857 183862878 mRNA hsa-miR-186 EIF2B5 miRanda miRanda
14034 chr3 183862859 183862859 1 + T C rs14955 183862841 + 183862821 183862861 41 TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCTGG TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCCGG < 41bp 1 0.60856363780524 1 0.958267331123352 experiment 0.78287272438952 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 EIF2B5 ENSG00000145191 UTR3 Human protein_coding chr3:183862841 chr3:183862859 . . 0 hm6A_associated_SNPs_6189 1 0 1 4 183862852 183862874 mRNA hsa-miR-200c EIF2B5 miRanda miRanda
14034 chr3 183862859 183862859 1 + T C rs14955 183862841 + 183862821 183862861 41 TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCTGG TGACCACCATCCAGGCTGAGACTGAAAGGAGCAGAGGCCGG < 41bp 1 0.60856363780524 1 0.958267331123352 experiment 0.78287272438952 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 EIF2B5 ENSG00000145191 UTR3 Human protein_coding chr3:183862841 chr3:183862859 . . 0 hm6A_associated_SNPs_6189 1 0 1 4 183862854 183862874 mRNA hsa-miR-429 EIF2B5 miRanda miRanda
14034 chr3 183901554 183901554 1 + A G rs114970633 183901566 + 183901546 183901586 41 CCAAGCACATTACAAGTGGGACCGGTGGAGCAGCCCCTGGG CCAAGCACGTTACAAGTGGGACCGGTGGAGCAGCCCCTGGG < 41bp 1 0.719726646123959 1 0.527717411518097 experiment 0.560546707752083 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 9 AP2M1 ENSG00000161203 UTR3 Human protein_coding chr3:183901566 chr3:183901554 . . 0 hm6A_associated_SNPs_6192 0 0 1 1 183901534 183901555 mRNA hsa-miR-218 AP2M1 miRanda miRanda
14034 chr3 183901843 183901843 1 + C T rs117568608 183901839 + 183901819 183901859 41 CTTCATTTTGTACACGTGTGACTTCGTCCAGTTACAAACCC CTTCATTTTGTACACGTGTGACTTTGTCCAGTTACAAACCC < 41bp 1 0.642491054379008 1 0.0424490571022034 experiment 0.715017891241984 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 AP2M1 ENSG00000161203 UTR3 Human protein_coding chr3:183901839 chr3:183901843 . . 0 hm6A_associated_SNPs_6193 0 0 1 3 183901823 183901843 mRNA hsa-miR-224 AP2M1 miRanda miRanda
14034 chr3 183901843 183901843 1 + C T rs117568608 183901839 + 183901819 183901859 41 CTTCATTTTGTACACGTGTGACTTCGTCCAGTTACAAACCC CTTCATTTTGTACACGTGTGACTTTGTCCAGTTACAAACCC < 41bp 1 0.642491054379008 1 0.0424490571022034 experiment 0.715017891241984 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 AP2M1 ENSG00000161203 UTR3 Human protein_coding chr3:183901839 chr3:183901843 . . 0 hm6A_associated_SNPs_6193 0 0 1 3 183901832 183901850 mRNA hsa-miR-378 AP2M1 miRanda miRanda
14034 chr3 183901843 183901843 1 + C T rs117568608 183901839 + 183901819 183901859 41 CTTCATTTTGTACACGTGTGACTTCGTCCAGTTACAAACCC CTTCATTTTGTACACGTGTGACTTTGTCCAGTTACAAACCC < 41bp 1 0.642491054379008 1 0.0424490571022034 experiment 0.715017891241984 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 AP2M1 ENSG00000161203 UTR3 Human protein_coding chr3:183901839 chr3:183901843 . . 0 hm6A_associated_SNPs_6193 0 0 1 3 183901831 183901850 mRNA hsa-miR-422a AP2M1 miRanda miRanda
14034 chr3 184026703 184026703 1 + C T rs6845 184026699 + 184026679 184026719 41 GTGACCACCAGGGGCTCTGAACTGCAGCTGATGTTATCAGC GTGACCACCAGGGGCTCTGAACTGTAGCTGATGTTATCAGC < 41bp 1 0.770763046482757 1 0.936276197433472 experiment 0.458473907034486 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 PSMD2 ENSG00000175166 UTR3 Human protein_coding chr3:184026699 chr3:184026703 . . 0 hm6A_associated_SNPs_6199 0 0 1 3 184026687 184026709 mRNA hsa-miR-148a PSMD2 miRanda miRanda
14034 chr3 184026703 184026703 1 + C T rs6845 184026699 + 184026679 184026719 41 GTGACCACCAGGGGCTCTGAACTGCAGCTGATGTTATCAGC GTGACCACCAGGGGCTCTGAACTGTAGCTGATGTTATCAGC < 41bp 1 0.770763046482757 1 0.936276197433472 experiment 0.458473907034486 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 PSMD2 ENSG00000175166 UTR3 Human protein_coding chr3:184026699 chr3:184026703 . . 0 hm6A_associated_SNPs_6199 0 0 1 3 184026701 184026723 mRNA hsa-miR-370 PSMD2 miRanda miRanda
14034 chr3 184026703 184026703 1 + C T rs6845 184026699 + 184026679 184026719 41 GTGACCACCAGGGGCTCTGAACTGCAGCTGATGTTATCAGC GTGACCACCAGGGGCTCTGAACTGTAGCTGATGTTATCAGC < 41bp 1 0.770763046482757 1 0.936276197433472 experiment 0.458473907034486 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 PSMD2 ENSG00000175166 UTR3 Human protein_coding chr3:184026699 chr3:184026703 . . 0 hm6A_associated_SNPs_6199 0 0 1 3 184026687 184026709 mRNA hsa-miR-148b PSMD2 miRanda miRanda
14034 chr3 184086052 184086052 1 + T A rs41543313 184086042 + 184086022 184086062 41 CCTGCATGGATTCGAGGTGGACTCCAGAGTTTATCTCCTGA CCTGCATGGATTCGAGGTGGACTCCAGAGTATATCTCCTGA < 41bp 1 0.744761939542709 1 0.974831819534302 experiment 0.510476120914582 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 POLR2H ENSG00000163882 CDS Human protein_coding chr3:184086042 chr3:184086052 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_6209 0 0 1 1 184086031 184086053 mRNA hsa-miR-490-3p POLR2H miRanda miRanda
14034 chr3 185348402 185348402 1 + C T rs3087964 185348395 + 185348375 185348415 41 GTTGTGGTCACCTTAAAGAGACTTCCCCTTCTGGAAATGTG GTTGTGGTCACCTTAAAGAGACTTCCCTTTCTGGAAATGTG < 41bp 1 0.625251432667341 1 0.98541784286499 experiment 0.749497134665319 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 SENP2 ENSG00000163904 UTR3 Human protein_coding chr3:185348395 chr3:185348402 . . 0 hm6A_associated_SNPs_6216 0 0 1 1 185348400 185348420 mRNA hsa-miR-197 SENP2 miRanda miRanda
14034 chr3 185348402 185348402 1 + C T rs3087964 185348419 + 185348399 185348439 41 CCCCTTCTGGAAATGTGGTGACTTGGCTTAGTCTTCAAACT CCCTTTCTGGAAATGTGGTGACTTGGCTTAGTCTTCAAACT < 41bp 1 0.675488076722696 1 0.965311765670776 experiment 0.649023846554609 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 SENP2 ENSG00000163904 UTR3 Human protein_coding chr3:185348419 chr3:185348402 . . 0 hm6A_associated_SNPs_6217 0 0 1 1 185348400 185348420 mRNA hsa-miR-197 SENP2 miRanda miRanda
14034 chr3 186303375 186303375 1 + G A rs181135600 186303386 + 186303366 186303406 41 TTTGCATTCGGAAAAGAATGACCAGCAAAAGGTTTACTAAT TTTGCATTCAGAAAAGAATGACCAGCAAAAGGTTTACTAAT < 41bp 1 0.34380832525232 1 0.0328375995159149 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303386 chr3:186303375 . . 0 hm6A_associated_SNPs_6222 0 0 1 1 186303370 186303392 mRNA hsa-miR-138 DNAJB11 miRanda miRanda
14034 chr3 186303385 186303385 1 + G A rs73059440 186303386 + 186303366 186303406 41 TTTGCATTCGGAAAAGAATGACCAGCAAAAGGTTTACTAAT TTTGCATTCGGAAAAGAATAACCAGCAAAAGGTTTACTAAT < 41bp 1 0.272356955930037 1 0.0315122604370117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303386 chr3:186303385 . . 0 hm6A_associated_SNPs_6223 0 0 1 6 186303382 186303403 mRNA hsa-miR-30a DNAJB11 miRanda miRanda
14034 chr3 186303385 186303385 1 + G A rs73059440 186303386 + 186303366 186303406 41 TTTGCATTCGGAAAAGAATGACCAGCAAAAGGTTTACTAAT TTTGCATTCGGAAAAGAATAACCAGCAAAAGGTTTACTAAT < 41bp 1 0.272356955930037 1 0.0315122604370117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303386 chr3:186303385 . . 0 hm6A_associated_SNPs_6223 0 0 1 6 186303381 186303403 mRNA hsa-miR-30c DNAJB11 miRanda miRanda
14034 chr3 186303385 186303385 1 + G A rs73059440 186303386 + 186303366 186303406 41 TTTGCATTCGGAAAAGAATGACCAGCAAAAGGTTTACTAAT TTTGCATTCGGAAAAGAATAACCAGCAAAAGGTTTACTAAT < 41bp 1 0.272356955930037 1 0.0315122604370117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303386 chr3:186303385 . . 0 hm6A_associated_SNPs_6223 0 0 1 6 186303382 186303403 mRNA hsa-miR-30d DNAJB11 miRanda miRanda
14034 chr3 186303385 186303385 1 + G A rs73059440 186303386 + 186303366 186303406 41 TTTGCATTCGGAAAAGAATGACCAGCAAAAGGTTTACTAAT TTTGCATTCGGAAAAGAATAACCAGCAAAAGGTTTACTAAT < 41bp 1 0.272356955930037 1 0.0315122604370117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303386 chr3:186303385 . . 0 hm6A_associated_SNPs_6223 0 0 1 6 186303382 186303403 mRNA hsa-miR-30b DNAJB11 miRanda miRanda
14034 chr3 186303385 186303385 1 + G A rs73059440 186303386 + 186303366 186303406 41 TTTGCATTCGGAAAAGAATGACCAGCAAAAGGTTTACTAAT TTTGCATTCGGAAAAGAATAACCAGCAAAAGGTTTACTAAT < 41bp 1 0.272356955930037 1 0.0315122604370117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303386 chr3:186303385 . . 0 hm6A_associated_SNPs_6223 0 0 1 6 186303370 186303392 mRNA hsa-miR-138 DNAJB11 miRanda miRanda
14034 chr3 186303385 186303385 1 + G A rs73059440 186303386 + 186303366 186303406 41 TTTGCATTCGGAAAAGAATGACCAGCAAAAGGTTTACTAAT TTTGCATTCGGAAAAGAATAACCAGCAAAAGGTTTACTAAT < 41bp 1 0.272356955930037 1 0.0315122604370117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303386 chr3:186303385 . . 0 hm6A_associated_SNPs_6223 0 0 1 6 186303384 186303403 mRNA hsa-miR-30e DNAJB11 miRanda miRanda
14034 chr3 186506806 186506806 1 + T C rs549907426 186506824 + 186506804 186506844 41 ACTATAACCTTGATAAGTAAACAGCAGCTGGTGGTTAACAA ACCATAACCTTGATAAGTAAACAGCAGCTGGTGGTTAACAA < 41bp 1 0.413591295608858 1 0.908024549484253 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 3 EIF4A2 ENSG00000156976 intronic Human protein_coding chr3:186506824 chr3:186506806 . . 0 hm6A_associated_SNPs_6237 0 0 1 1 186506793 186506814 mRNA hsa-miR-154 EIF4A2 miRanda miRanda
14034 chr3 188608011 188608011 1 + T C rs77691226 188608025 + 188608005 188608045 41 ATGAGCTGCTAGTCTGAATAACATTCCCTGACTTAGGGAAA ATGAGCCGCTAGTCTGAATAACATTCCCTGACTTAGGGAAA < 41bp 1 0.328358055590844 1 0.0144981443881989 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 7 LPP ENSG00000145012 UTR3 Human protein_coding chr3:188608025 chr3:188608011 . . 0 hm6A_associated_SNPs_6257 0 0 1 2 188608011 188608032 mRNA hsa-miR-1 LPP miRanda miRanda
14034 chr3 188608011 188608011 1 + T C rs77691226 188608025 + 188608005 188608045 41 ATGAGCTGCTAGTCTGAATAACATTCCCTGACTTAGGGAAA ATGAGCCGCTAGTCTGAATAACATTCCCTGACTTAGGGAAA < 41bp 1 0.328358055590844 1 0.0144981443881989 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 7 LPP ENSG00000145012 UTR3 Human protein_coding chr3:188608025 chr3:188608011 . . 0 hm6A_associated_SNPs_6257 0 0 1 2 188608011 188608032 mRNA hsa-miR-206 LPP miRanda miRanda
14034 chr3 188608027 188608027 1 + A G rs143646241 188608025 + 188608005 188608045 41 ATGAGCTGCTAGTCTGAATAACATTCCCTGACTTAGGGAAA ATGAGCTGCTAGTCTGAATAACGTTCCCTGACTTAGGGAAA Direct Loss 1 0.209345925379313 1 0.00851088762283325 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 LPP ENSG00000145012 UTR3 Human protein_coding chr3:188608025 chr3:188608027 . . 0 hm6A_associated_SNPs_6258 0 0 1 3 188608011 188608032 mRNA hsa-miR-1 LPP miRanda miRanda
14034 chr3 188608027 188608027 1 + A G rs143646241 188608025 + 188608005 188608045 41 ATGAGCTGCTAGTCTGAATAACATTCCCTGACTTAGGGAAA ATGAGCTGCTAGTCTGAATAACGTTCCCTGACTTAGGGAAA Direct Loss 1 0.209345925379313 1 0.00851088762283325 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 LPP ENSG00000145012 UTR3 Human protein_coding chr3:188608025 chr3:188608027 . . 0 hm6A_associated_SNPs_6258 0 0 1 3 188608011 188608032 mRNA hsa-miR-206 LPP miRanda miRanda
14034 chr3 188608027 188608027 1 + A G rs143646241 188608025 + 188608005 188608045 41 ATGAGCTGCTAGTCTGAATAACATTCCCTGACTTAGGGAAA ATGAGCTGCTAGTCTGAATAACGTTCCCTGACTTAGGGAAA Direct Loss 1 0.209345925379313 1 0.00851088762283325 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 LPP ENSG00000145012 UTR3 Human protein_coding chr3:188608025 chr3:188608027 . . 0 hm6A_associated_SNPs_6258 0 0 1 3 188608014 188608032 mRNA hsa-miR-613 LPP miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856188 193856211 mRNA hsa-miR-93 HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856187 193856210 mRNA hsa-miR-148a HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856188 193856209 mRNA hsa-miR-130a HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856188 193856210 mRNA hsa-miR-152 HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856187 193856209 mRNA hsa-miR-301a HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856188 193856209 mRNA hsa-miR-130b HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856198 193856219 mRNA hsa-miR-381 HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856187 193856210 mRNA hsa-miR-148b HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856202 193856223 mRNA hsa-miR-410 HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856187 193856209 mRNA hsa-miR-454 HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856198 193856219 mRNA hsa-miR-300 HES1 miRanda miRanda
14034 chr3 193856203 193856203 1 + T C rs11541817 193856199 + 193856179 193856219 41 AGAGCTGTATTAAGTGACTGACCATGCACTATATTTGTATA AGAGCTGTATTAAGTGACTGACCACGCACTATATTTGTATA < 41bp 1 0.391888357621624 1 0.977906405925751 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 HES1 ENSG00000114315 UTR3 Human protein_coding chr3:193856199 chr3:193856203 . . 0 hm6A_associated_SNPs_6266 0 0 1 12 193856187 193856209 mRNA hsa-miR-301b HES1 miRanda miRanda
14034 chr3 196311191 196311191 1 + A G rs192655234 196311174 + 196311154 196311194 41 ACTTTGGTTTACCTTGGAAAACCTTTGGACGGATGACAGTG ACTTTGGTTTACCTTGGAAAACCTTTGGACGGATGACGGTG < 41bp 1 0.620862010044767 1 0.937323153018951 experiment 0.758275979910465 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 FBXO45 ENSG00000174013 UTR3 Human protein_coding chr3:196311174 chr3:196311191 . . 0 hm6A_associated_SNPs_6275 0 0 1 1 196311190 196311210 mRNA hsa-miR-377 FBXO45 miRanda miRanda
14034 chr3 196311191 196311191 1 + A G rs192655234 196311189 + 196311169 196311209 41 GGAAAACCTTTGGACGGATGACAGTGGCTTTCTTGTGATGA GGAAAACCTTTGGACGGATGACGGTGGCTTTCTTGTGATGA Direct Loss 1 0.745661332695786 1 0.912838280200958 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 FBXO45 ENSG00000174013 UTR3 Human protein_coding chr3:196311189 chr3:196311191 . . 0 hm6A_associated_SNPs_6276 0 0 1 1 196311190 196311210 mRNA hsa-miR-377 FBXO45 miRanda miRanda
14034 chr3 196313689 196313689 1 + A C rs569513081 196313690 + 196313670 196313710 41 GGTCATAAGGATTTTTAAAAACTTTCTGGTCATTTCAATAT GGTCATAAGGATTTTTAAACACTTTCTGGTCATTTCAATAT Direct Loss 1 0.18080621720298 1 0.856183052062988 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 FBXO45 ENSG00000174013 UTR3 Human protein_coding chr3:196313690 chr3:196313689 . . 0 hm6A_associated_SNPs_6281 0 0 1 1 196313686 196313707 mRNA hsa-miR-203 FBXO45 miRanda miRanda
14034 chr3 196388822 196388822 1 + T A rs149399559 196388824 + 196388804 196388844 41 GGTAAAATATTTATTAAGTGACTTTTTCAGAAATAAAAGGC GGTAAAATATTTATTAAGAGACTTTTTCAGAAATAAAAGGC < 41bp 1 0.0336391735549601 1 0.992168724536896 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 19 NRROS ENSG00000174004 UTR3 Human protein_coding chr3:196388824 chr3:196388822 . . 0 hm6A_associated_SNPs_6289 0 0 0 1 196388807 196388828 mRNA hsa-miR-224 LRRC33 miRanda miRanda
14034 chr3 196449372 196449372 1 + G A rs377629523 196449373 + 196449353 196449393 41 AAACAGGACATTCCTGCAGGACTTTATGTGGATCCGTATGA AAACAGGACATTCCTGCAGAACTTTATGTGGATCCGTATGA < 41bp 1 0.521860051355701 1 0.873245477676392 experiment 0.956279897288598 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 PIGX ENSG00000163964 CDS Human protein_coding chr3:196449373 chr3:196449372 nonsynonymous SNV 0.962 4 hm6A_associated_SNPs_6290 0 0 1 1 196449368 196449389 mRNA hsa-miR-127-3p PIGX miRanda miRanda
14034 chr3 196462247 196462247 1 + G C rs114034131 196462229 + 196462209 196462249 41 TAGGGCAAGCATGTTCCAAAACAGAAGACATCAAACCAGGG TAGGGCAAGCATGTTCCAAAACAGAAGACATCAAACCACGG < 41bp 1 0.131323016736299 1 0.00314581394195557 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 PIGX ENSG00000163964 UTR3 Human protein_coding chr3:196462229 chr3:196462247 . . 0 hm6A_associated_SNPs_6291 0 0 1 2 196462234 196462255 mRNA hsa-miR-362-3p PIGX miRanda miRanda
14034 chr3 196462247 196462247 1 + G C rs114034131 196462229 + 196462209 196462249 41 TAGGGCAAGCATGTTCCAAAACAGAAGACATCAAACCAGGG TAGGGCAAGCATGTTCCAAAACAGAAGACATCAAACCACGG < 41bp 1 0.131323016736299 1 0.00314581394195557 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 PIGX ENSG00000163964 UTR3 Human protein_coding chr3:196462229 chr3:196462247 . . 0 hm6A_associated_SNPs_6291 0 0 1 2 196462232 196462255 mRNA hsa-miR-329 PIGX miRanda miRanda
14034 chr3 196462247 196462247 1 + G C rs114034131 196462236 + 196462216 196462256 41 AGCATGTTCCAAAACAGAAGACATCAAACCAGGGTGTGTTG AGCATGTTCCAAAACAGAAGACATCAAACCACGGTGTGTTG < 41bp 1 0.167591768828379 1 0.00425449013710022 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 32 PIGX ENSG00000163964 UTR3 Human protein_coding chr3:196462236 chr3:196462247 . . 0 hm6A_associated_SNPs_6292 0 0 1 2 196462234 196462255 mRNA hsa-miR-362-3p PIGX miRanda miRanda
14034 chr3 196462247 196462247 1 + G C rs114034131 196462236 + 196462216 196462256 41 AGCATGTTCCAAAACAGAAGACATCAAACCAGGGTGTGTTG AGCATGTTCCAAAACAGAAGACATCAAACCACGGTGTGTTG < 41bp 1 0.167591768828379 1 0.00425449013710022 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 32 PIGX ENSG00000163964 UTR3 Human protein_coding chr3:196462236 chr3:196462247 . . 0 hm6A_associated_SNPs_6292 0 0 1 2 196462232 196462255 mRNA hsa-miR-329 PIGX miRanda miRanda
14034 chr3 196462247 196462247 1 + G C rs114034131 196462243 + 196462223 196462263 41 TCCAAAACAGAAGACATCAAACCAGGGTGTGTTGGCATTAT TCCAAAACAGAAGACATCAAACCACGGTGTGTTGGCATTAT < 41bp 1 0.039110198045046 1 0.00241070985794067 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 PIGX ENSG00000163964 UTR3 Human protein_coding chr3:196462243 chr3:196462247 . . 0 hm6A_associated_SNPs_6293 0 0 1 2 196462234 196462255 mRNA hsa-miR-362-3p PIGX miRanda miRanda
14034 chr3 196462247 196462247 1 + G C rs114034131 196462243 + 196462223 196462263 41 TCCAAAACAGAAGACATCAAACCAGGGTGTGTTGGCATTAT TCCAAAACAGAAGACATCAAACCACGGTGTGTTGGCATTAT < 41bp 1 0.039110198045046 1 0.00241070985794067 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 PIGX ENSG00000163964 UTR3 Human protein_coding chr3:196462243 chr3:196462247 . . 0 hm6A_associated_SNPs_6293 0 0 1 2 196462232 196462255 mRNA hsa-miR-329 PIGX miRanda miRanda
14034 chr3 196661070 196661070 1 + C G rs150674559 196661090 + 196661070 196661110 41 CATAGCACTGAATCTGAGTAACAGTCATCCTGGATTTATAG GATAGCACTGAATCTGAGTAACAGTCATCCTGGATTTATAG < 41bp 1 0.236686606341857 1 0.653156995773315 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 1 SENP5 ENSG00000119231 UTR3 Human protein_coding chr3:196661090 chr3:196661070 . . 0 hm6A_associated_SNPs_6305 0 0 1 1 196661058 196661080 mRNA hsa-miR-152 SENP5 miRanda miRanda
14034 chr3 196670280 196670280 1 + C T rs146231238 196670271 + 196670251 196670291 41 GGGACGATATGGATGAAAAGACAACCCTACAGCTGCCAAAT GGGACGATATGGATGAAAAGACAACCCTATAGCTGCCAAAT < 41bp 1 0.470250649959921 1 0.974427103996277 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 NCBP2-AS2 ENSG00000270170 ncRNA_exonic Human protein_coding chr3:196670271 chr3:196670280 . . 0 hm6A_associated_SNPs_6310 0 0 1 3 196670263 196670288 mRNA hsa-miR-34c-5p LOC152217 miRanda miRanda
14034 chr3 196670280 196670280 1 + C T rs146231238 196670271 + 196670251 196670291 41 GGGACGATATGGATGAAAAGACAACCCTACAGCTGCCAAAT GGGACGATATGGATGAAAAGACAACCCTATAGCTGCCAAAT < 41bp 1 0.470250649959921 1 0.974427103996277 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 NCBP2-AS2 ENSG00000270170 ncRNA_exonic Human protein_coding chr3:196670271 chr3:196670280 . . 0 hm6A_associated_SNPs_6310 0 0 1 3 196670266 196670288 mRNA hsa-miR-449a LOC152217 miRanda miRanda
14034 chr3 196670280 196670280 1 + C T rs146231238 196670271 + 196670251 196670291 41 GGGACGATATGGATGAAAAGACAACCCTACAGCTGCCAAAT GGGACGATATGGATGAAAAGACAACCCTATAGCTGCCAAAT < 41bp 1 0.470250649959921 1 0.974427103996277 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 NCBP2-AS2 ENSG00000270170 ncRNA_exonic Human protein_coding chr3:196670271 chr3:196670280 . . 0 hm6A_associated_SNPs_6310 0 0 1 3 196670266 196670288 mRNA hsa-miR-449b LOC152217 miRanda miRanda
14034 chr3 197508684 197508684 1 + A G rs141529189 197508682 + 197508662 197508702 41 TGTTTTTTTCTTTTCTCTAGACAGGGATGACGTTGAATGAG TGTTTTTTTCTTTTCTCTAGACGGGGATGACGTTGAATGAG Direct Loss 1 0.547740720223753 1 0.182506054639816 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 FYTTD1 ENSG00000122068 CDS Human protein_coding chr3:197508682 chr3:197508684 synonymous SNV . 0 hm6A_associated_SNPs_6311 0 0 1 1 197508682 197508688 mRNA hsa-miR-339-5p FYTTD1 miRanda miRanda
14034 chr3 197598379 197598379 1 + G C rs548366915 197598393 + 197598373 197598413 41 ACATTTGTTAAGCACAGTGGACAGACATTTCTTAAGCATTG ACATTTCTTAAGCACAGTGGACAGACATTTCTTAAGCATTG < 41bp 1 0.0856509203657439 1 0.796709775924683 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 LRCH3 ENSG00000186001 UTR3 Human protein_coding chr3:197598393 chr3:197598379 . . 0 hm6A_associated_SNPs_6318 0 0 1 1 197598370 197598389 mRNA hsa-miR-218 LRCH3 miRanda miRanda
14034 chr3 197598386 197598386 1 + A G rs74857069 197598393 + 197598373 197598413 41 ACATTTGTTAAGCACAGTGGACAGACATTTCTTAAGCATTG ACATTTGTTAAGCGCAGTGGACAGACATTTCTTAAGCATTG < 41bp 1 0.0800888010186377 1 0.747290074825287 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 LRCH3 ENSG00000186001 UTR3 Human protein_coding chr3:197598393 chr3:197598386 . . 0 hm6A_associated_SNPs_6319 0 0 1 1 197598370 197598389 mRNA hsa-miR-218 LRCH3 miRanda miRanda
14034 chr3 197682658 197682658 1 + C A rs10022 197682645 + 197682625 197682665 41 TGTACCCCTCAAGGATTTAAACTAACGAAAAATCAATAAAT TGTACCCCTCAAGGATTTAAACTAACGAAAAATAAATAAAT < 41bp 1 0.3921007639995 1 0.0218755602836609 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 34 RPL35A ENSG00000182899 UTR3 Human protein_coding chr3:197682645 chr3:197682658 . . 0 hm6A_associated_SNPs_6321 1 0 1 2 197682652 197682674 mRNA hsa-miR-23a RPL35A miRanda miRanda
14034 chr3 197682658 197682658 1 + C A rs10022 197682645 + 197682625 197682665 41 TGTACCCCTCAAGGATTTAAACTAACGAAAAATCAATAAAT TGTACCCCTCAAGGATTTAAACTAACGAAAAATAAATAAAT < 41bp 1 0.3921007639995 1 0.0218755602836609 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 34 RPL35A ENSG00000182899 UTR3 Human protein_coding chr3:197682645 chr3:197682658 . . 0 hm6A_associated_SNPs_6321 1 0 1 2 197682654 197682674 mRNA hsa-miR-23b RPL35A miRanda miRanda
14034 chr3 197766876 197766876 1 + A G rs189619388 197766893 + 197766873 197766913 41 ACAACTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC ACAGCTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC < 41bp 1 0.0718836205772649 1 0.636968612670898 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 4 LMLN ENSG00000185621 UTR3 Human protein_coding chr3:197766893 chr3:197766876 . . 0 hm6A_associated_SNPs_6322 0 0 0 5 197766860 197766883 mRNA hsa-miR-23a LMLN miRanda miRanda
14034 chr3 197766876 197766876 1 + A G rs189619388 197766893 + 197766873 197766913 41 ACAACTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC ACAGCTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC < 41bp 1 0.0718836205772649 1 0.636968612670898 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 4 LMLN ENSG00000185621 UTR3 Human protein_coding chr3:197766893 chr3:197766876 . . 0 hm6A_associated_SNPs_6322 0 0 0 5 197766861 197766883 mRNA hsa-miR-27a LMLN miRanda miRanda
14034 chr3 197766876 197766876 1 + A G rs189619388 197766893 + 197766873 197766913 41 ACAACTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC ACAGCTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC < 41bp 1 0.0718836205772649 1 0.636968612670898 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 4 LMLN ENSG00000185621 UTR3 Human protein_coding chr3:197766893 chr3:197766876 . . 0 hm6A_associated_SNPs_6322 0 0 0 5 197766860 197766883 mRNA hsa-miR-23b LMLN miRanda miRanda
14034 chr3 197766876 197766876 1 + A G rs189619388 197766893 + 197766873 197766913 41 ACAACTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC ACAGCTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC < 41bp 1 0.0718836205772649 1 0.636968612670898 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 4 LMLN ENSG00000185621 UTR3 Human protein_coding chr3:197766893 chr3:197766876 . . 0 hm6A_associated_SNPs_6322 0 0 0 5 197766861 197766883 mRNA hsa-miR-27b LMLN miRanda miRanda
14034 chr3 197766876 197766876 1 + A G rs189619388 197766893 + 197766873 197766913 41 ACAACTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC ACAGCTGTGAAACAACAAAAACACAACTATTCCTTTGTGAC < 41bp 1 0.0718836205772649 1 0.636968612670898 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 4 LMLN ENSG00000185621 UTR3 Human protein_coding chr3:197766893 chr3:197766876 . . 0 hm6A_associated_SNPs_6322 0 0 0 5 197766860 197766883 mRNA hsa-miR-145 LMLN miRanda miRanda
14034 chr4 760309 760309 1 + T C rs80327149 760322 + 760302 760342 41 ATGTCTTTTCATGGTGAATGACAATATTTATGTTGCCTTTA ATGTCTTCTCATGGTGAATGACAATATTTATGTTGCCTTTA < 41bp 1 0.756652211905619 1 0.862484216690063 experiment 0.486695576188762 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 8 PCGF3 ENSG00000249592 ncRNA_intronic Human antisense chr4:760322 chr4:760309 . . 0 hm6A_associated_SNPs_6335 0 0 1 2 760298 760319 mRNA hsa-miR-197 PCGF3 miRanda miRanda
14034 chr4 760309 760309 1 + T C rs80327149 760322 + 760302 760342 41 ATGTCTTTTCATGGTGAATGACAATATTTATGTTGCCTTTA ATGTCTTCTCATGGTGAATGACAATATTTATGTTGCCTTTA < 41bp 1 0.756652211905619 1 0.862484216690063 experiment 0.486695576188762 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 8 PCGF3 ENSG00000249592 ncRNA_intronic Human antisense chr4:760322 chr4:760309 . . 0 hm6A_associated_SNPs_6335 0 0 1 2 760309 760328 mRNA hsa-miR-219-5p PCGF3 miRanda miRanda
14034 chr4 1246251 1246251 1 + C G rs561652106 1246231 + 1246211 1246251 41 AATTTTTTAACAATAAAATGACCAGCAAGTAAACTTGAAAC AATTTTTTAACAATAAAATGACCAGCAAGTAAACTTGAAAG < 41bp 1 0.165960952630797 1 0.780811667442322 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1246231 chr4:1246251 . . 0 hm6A_associated_SNPs_6353 0 0 1 1 1246239 1246262 mRNA hsa-miR-136 C4orf42 miRanda miRanda
14034 chr4 1246251 1246251 1 + C G rs561652106 1246243 + 1246223 1246263 41 ATAAAATGACCAGCAAGTAAACTTGAAACAAAAATGGACAA ATAAAATGACCAGCAAGTAAACTTGAAAGAAAAATGGACAA < 41bp 1 0.111343226080645 1 0.671938538551331 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1246243 chr4:1246251 . . 0 hm6A_associated_SNPs_6354 0 0 1 1 1246239 1246262 mRNA hsa-miR-136 C4orf42 miRanda miRanda
14034 chr4 1246251 1246251 1 + C G rs561652106 1246250 + 1246230 1246270 41 GACCAGCAAGTAAACTTGAAACAAAAATGGACAAATATCTA GACCAGCAAGTAAACTTGAAAGAAAAATGGACAAATATCTA Direct Loss 1 0.229571184562155 1 0.695127487182617 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1246250 chr4:1246251 . . 0 hm6A_associated_SNPs_6355 0 0 1 1 1246239 1246262 mRNA hsa-miR-136 C4orf42 miRanda miRanda
14034 chr4 1246251 1246251 1 + C G rs561652106 1246260 + 1246240 1246280 41 TAAACTTGAAACAAAAATGGACAAATATCTAAAATATTTTT TAAACTTGAAAGAAAAATGGACAAATATCTAAAATATTTTT < 41bp 1 0.260249877932744 1 0.856774091720581 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1246260 chr4:1246251 . . 0 hm6A_associated_SNPs_6356 0 0 1 1 1246239 1246262 mRNA hsa-miR-136 C4orf42 miRanda miRanda
14034 chr4 1941667 1941667 1 + G A rs189946613 1941669 + 1941649 1941689 41 AACTCAGATTCATGAAATGGACAAACAGTGCACTATGTTAG AACTCAGATTCATGAAATAGACAAACAGTGCACTATGTTAG < 41bp 1 0.0377763083400333 1 0.011848509311676 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1941669 chr4:1941667 . . 0 hm6A_associated_SNPs_6379 0 0 1 1 1941660 1941682 mRNA hsa-miR-134 WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982961 + 1982941 1982981 41 GTTAAACTAATGAGCAAGTAACACTAACTTTGAATGTCTCT GTTAAACTAATGAGCAAGTAACACTAACTTTGCATGTCTCT < 41bp 1 0.194181461813845 1 0.779096722602844 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 33 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982961 chr4:1982973 . . 0 hm6A_associated_SNPs_6385 1 0 1 4 1982956 1982978 mRNA hsa-miR-181a WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982961 + 1982941 1982981 41 GTTAAACTAATGAGCAAGTAACACTAACTTTGAATGTCTCT GTTAAACTAATGAGCAAGTAACACTAACTTTGCATGTCTCT < 41bp 1 0.194181461813845 1 0.779096722602844 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 33 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982961 chr4:1982973 . . 0 hm6A_associated_SNPs_6385 1 0 1 4 1982953 1982978 mRNA hsa-miR-181b WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982961 + 1982941 1982981 41 GTTAAACTAATGAGCAAGTAACACTAACTTTGAATGTCTCT GTTAAACTAATGAGCAAGTAACACTAACTTTGCATGTCTCT < 41bp 1 0.194181461813845 1 0.779096722602844 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 33 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982961 chr4:1982973 . . 0 hm6A_associated_SNPs_6385 1 0 1 4 1982959 1982978 mRNA hsa-miR-181c WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982961 + 1982941 1982981 41 GTTAAACTAATGAGCAAGTAACACTAACTTTGAATGTCTCT GTTAAACTAATGAGCAAGTAACACTAACTTTGCATGTCTCT < 41bp 1 0.194181461813845 1 0.779096722602844 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 33 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982961 chr4:1982973 . . 0 hm6A_associated_SNPs_6385 1 0 1 4 1982956 1982978 mRNA hsa-miR-181d WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982967 + 1982947 1982987 41 CTAATGAGCAAGTAACACTAACTTTGAATGTCTCTACAATA CTAATGAGCAAGTAACACTAACTTTGCATGTCTCTACAATA < 41bp 1 0.261911128156243 1 0.889897644519806 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 27 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982967 chr4:1982973 . . 0 hm6A_associated_SNPs_6386 1 0 1 4 1982956 1982978 mRNA hsa-miR-181a WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982967 + 1982947 1982987 41 CTAATGAGCAAGTAACACTAACTTTGAATGTCTCTACAATA CTAATGAGCAAGTAACACTAACTTTGCATGTCTCTACAATA < 41bp 1 0.261911128156243 1 0.889897644519806 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 27 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982967 chr4:1982973 . . 0 hm6A_associated_SNPs_6386 1 0 1 4 1982953 1982978 mRNA hsa-miR-181b WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982967 + 1982947 1982987 41 CTAATGAGCAAGTAACACTAACTTTGAATGTCTCTACAATA CTAATGAGCAAGTAACACTAACTTTGCATGTCTCTACAATA < 41bp 1 0.261911128156243 1 0.889897644519806 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 27 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982967 chr4:1982973 . . 0 hm6A_associated_SNPs_6386 1 0 1 4 1982959 1982978 mRNA hsa-miR-181c WHSC1 miRanda miRanda
14034 chr4 1982973 1982973 1 + A C rs146115430 1982967 + 1982947 1982987 41 CTAATGAGCAAGTAACACTAACTTTGAATGTCTCTACAATA CTAATGAGCAAGTAACACTAACTTTGCATGTCTCTACAATA < 41bp 1 0.261911128156243 1 0.889897644519806 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 27 NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1982967 chr4:1982973 . . 0 hm6A_associated_SNPs_6386 1 0 1 4 1982956 1982978 mRNA hsa-miR-181d WHSC1 miRanda miRanda
14034 chr4 2517291 2517291 1 + C T rs143675922 2517287 + 2517267 2517307 41 TCCACTCATAAAATATGGTAACACCCATTTTAAAATTTAAG TCCACTCATAAAATATGGTAACACTCATTTTAAAATTTAAG < 41bp 1 0.523631951821981 1 0.83720326423645 experiment 0.952736096356038 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 RNF4 ENSG00000063978 UTR3 Human protein_coding chr4:2517287 chr4:2517291 . . 0 hm6A_associated_SNPs_6396 0 0 1 1 2517284 2517304 mRNA hsa-miR-590-3p RNF4 miRanda miRanda
14034 chr4 3770069 3770069 1 + G C rs7434444 3770070 + 3770050 3770090 41 AAGCAAGGAGCCCCCCAAAGACACTACCACTCCCCATCCCC AAGCAAGGAGCCCCCCAAACACACTACCACTCCCCATCCCC Direct Loss 1 0.783201637409139 1 0.449462980031967 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 20 ADRA2C ENSG00000184160 UTR3 Human protein_coding chr4:3770070 chr4:3770069 . . 0 hm6A_associated_SNPs_6435 0 0 1 1 3770055 3770077 mRNA hsa-miR-142-3p ADRA2C miRanda miRanda
14034 chr4 5814412 5814412 1 + T C rs371788560 5814402 + 5814382 5814422 41 TCCTTTGATGGAGGTTAGGGACTGTCACCCTCAGCACTGTG TCCTTTGATGGAGGTTAGGGACTGTCACCCCCAGCACTGTG < 41bp 1 0.591828641665074 1 0.997430682182312 experiment 0.816342716669853 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 EVC ENSG00000072840 UTR3 Human protein_coding chr4:5814402 chr4:5814412 . . 0 hm6A_associated_SNPs_6443 2 0 1 3 5814405 5814424 mRNA hsa-miR-27a EVC miRanda miRanda
14034 chr4 5814412 5814412 1 + T C rs371788560 5814402 + 5814382 5814422 41 TCCTTTGATGGAGGTTAGGGACTGTCACCCTCAGCACTGTG TCCTTTGATGGAGGTTAGGGACTGTCACCCCCAGCACTGTG < 41bp 1 0.591828641665074 1 0.997430682182312 experiment 0.816342716669853 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 EVC ENSG00000072840 UTR3 Human protein_coding chr4:5814402 chr4:5814412 . . 0 hm6A_associated_SNPs_6443 2 0 1 3 5814405 5814424 mRNA hsa-miR-27b EVC miRanda miRanda
14034 chr4 5814412 5814412 1 + T C rs371788560 5814402 + 5814382 5814422 41 TCCTTTGATGGAGGTTAGGGACTGTCACCCTCAGCACTGTG TCCTTTGATGGAGGTTAGGGACTGTCACCCCCAGCACTGTG < 41bp 1 0.591828641665074 1 0.997430682182312 experiment 0.816342716669853 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 EVC ENSG00000072840 UTR3 Human protein_coding chr4:5814402 chr4:5814412 . . 0 hm6A_associated_SNPs_6443 2 0 1 3 5814403 5814423 mRNA hsa-miR-128 EVC miRanda miRanda
14034 chr4 5814412 5814412 1 + T C rs371788560 5814424 + 5814404 5814444 41 TGTCACCCTCAGCACTGTGAACATACCGGGCGAGATCATTC TGTCACCCCCAGCACTGTGAACATACCGGGCGAGATCATTC < 41bp 1 0.724971332506536 1 0.987443268299103 experiment 0.550057334986929 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 EVC ENSG00000072840 UTR3 Human protein_coding chr4:5814424 chr4:5814412 . . 0 hm6A_associated_SNPs_6444 2 0 1 3 5814405 5814424 mRNA hsa-miR-27a EVC miRanda miRanda
14034 chr4 5814412 5814412 1 + T C rs371788560 5814424 + 5814404 5814444 41 TGTCACCCTCAGCACTGTGAACATACCGGGCGAGATCATTC TGTCACCCCCAGCACTGTGAACATACCGGGCGAGATCATTC < 41bp 1 0.724971332506536 1 0.987443268299103 experiment 0.550057334986929 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 EVC ENSG00000072840 UTR3 Human protein_coding chr4:5814424 chr4:5814412 . . 0 hm6A_associated_SNPs_6444 2 0 1 3 5814405 5814424 mRNA hsa-miR-27b EVC miRanda miRanda
14034 chr4 5814412 5814412 1 + T C rs371788560 5814424 + 5814404 5814444 41 TGTCACCCTCAGCACTGTGAACATACCGGGCGAGATCATTC TGTCACCCCCAGCACTGTGAACATACCGGGCGAGATCATTC < 41bp 1 0.724971332506536 1 0.987443268299103 experiment 0.550057334986929 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 EVC ENSG00000072840 UTR3 Human protein_coding chr4:5814424 chr4:5814412 . . 0 hm6A_associated_SNPs_6444 2 0 1 3 5814403 5814423 mRNA hsa-miR-128 EVC miRanda miRanda
14034 chr4 6304344 6304344 1 + G A rs1046320 6304348 + 6304328 6304368 41 ACCATGTGTAGATTGCGTGGACCCCGACAAAGGGAAGGCTG ACCATGTGTAGATTGCATGGACCCCGACAAAGGGAAGGCTG < 41bp 1 0.741814999186349 1 0.990005135536194 experiment 0.516370001627303 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304348 chr4:6304344 . . 0 hm6A_associated_SNPs_6454 2 0 1 2 6304340 6304363 mRNA hsa-miR-204 WFS1 miRanda miRanda
14034 chr4 6304344 6304344 1 + G A rs1046320 6304348 + 6304328 6304368 41 ACCATGTGTAGATTGCGTGGACCCCGACAAAGGGAAGGCTG ACCATGTGTAGATTGCATGGACCCCGACAAAGGGAAGGCTG < 41bp 1 0.741814999186349 1 0.990005135536194 experiment 0.516370001627303 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304348 chr4:6304344 . . 0 hm6A_associated_SNPs_6454 2 0 1 2 6304342 6304363 mRNA hsa-miR-211 WFS1 miRanda miRanda
14034 chr4 6304436 6304436 1 + T C rs60985011 6304451 + 6304431 6304471 41 GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA GAGCCCGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA < 41bp 1 0.675527759844207 1 0.944441318511963 experiment 0.648944480311586 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304451 chr4:6304436 . . 0 hm6A_associated_SNPs_6455 2 0 1 2 6304413 6304436 mRNA hsa-miR-24 WFS1 miRanda miRanda
14034 chr4 6304436 6304436 1 + T C rs60985011 6304451 + 6304431 6304471 41 GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA GAGCCCGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA < 41bp 1 0.675527759844207 1 0.944441318511963 experiment 0.648944480311586 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304451 chr4:6304436 . . 0 hm6A_associated_SNPs_6455 2 0 1 2 6304436 6304459 mRNA hsa-miR-10a WFS1 miRanda miRanda
14034 chr4 6304437 6304437 1 + G C rs80055761 6304451 + 6304431 6304471 41 GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA GAGCCTCACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA < 41bp 1 0.669726287286627 1 0.929446339607239 experiment 0.660547425426747 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304451 chr4:6304437 . . 0 hm6A_associated_SNPs_6456 2 0 1 1 6304436 6304459 mRNA hsa-miR-10a WFS1 miRanda miRanda
14034 chr4 6304448 6304448 1 + G A rs1046322 6304451 + 6304431 6304471 41 GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA GAGCCTGACCTTTCTGAATGACATGGGTGTGCCAGGCTAGA < 41bp 1 0.730352869285515 1 0.957057297229767 experiment 0.539294261428969 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304451 chr4:6304448 . . 0 hm6A_associated_SNPs_6457 2 0 1 1 6304436 6304459 mRNA hsa-miR-10a WFS1 miRanda miRanda
14034 chr4 6304458 6304458 1 + T G rs571223325 6304451 + 6304431 6304471 41 GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA GAGCCTGACCTTTCTGAGTGACATGGGGGTGCCAGGCTAGA < 41bp 1 0.705142656680125 1 0.937878966331482 experiment 0.58971468663975 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304451 chr4:6304458 . . 0 hm6A_associated_SNPs_6458 0 0 1 2 6304436 6304459 mRNA hsa-miR-10a WFS1 miRanda miRanda
14034 chr4 6304458 6304458 1 + T G rs571223325 6304451 + 6304431 6304471 41 GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA GAGCCTGACCTTTCTGAGTGACATGGGGGTGCCAGGCTAGA < 41bp 1 0.705142656680125 1 0.937878966331482 experiment 0.58971468663975 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304451 chr4:6304458 . . 0 hm6A_associated_SNPs_6458 0 0 1 2 6304449 6304473 mRNA hsa-miR-346 WFS1 miRanda miRanda
14034 chr4 6304458 6304458 1 + T G rs571223325 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGGGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG < 41bp 1 0.644484918377064 1 0.90069180727005 experiment 0.711030163245872 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304458 . . 0 hm6A_associated_SNPs_6459 0 0 1 2 6304436 6304459 mRNA hsa-miR-10a WFS1 miRanda miRanda
14034 chr4 6304458 6304458 1 + T G rs571223325 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGGGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG < 41bp 1 0.644484918377064 1 0.90069180727005 experiment 0.711030163245872 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304458 . . 0 hm6A_associated_SNPs_6459 0 0 1 2 6304449 6304473 mRNA hsa-miR-346 WFS1 miRanda miRanda
14034 chr4 6304469 6304469 1 + A G rs1046325 6304451 + 6304431 6304471 41 GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTAGA GAGCCTGACCTTTCTGAGTGACATGGGTGTGCCAGGCTGGA < 41bp 1 0.687476143108589 1 0.965812802314758 experiment 0.625047713782823 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304451 chr4:6304469 . . 0 hm6A_associated_SNPs_6460 2 0 1 1 6304449 6304473 mRNA hsa-miR-346 WFS1 miRanda miRanda
14034 chr4 6304469 6304469 1 + A G rs1046325 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTGGACTAGGAGGTTCCGGTGTCTG < 41bp 1 0.769410656455956 1 0.962639272212982 experiment 0.461178687088089 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304469 . . 0 hm6A_associated_SNPs_6461 2 0 1 1 6304449 6304473 mRNA hsa-miR-346 WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304504 mRNA hsa-miR-17 WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304504 mRNA hsa-miR-20a WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304482 6304504 mRNA hsa-miR-93 WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304504 mRNA hsa-miR-106a WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304503 mRNA hsa-miR-302a WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304503 mRNA hsa-miR-302b WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304503 mRNA hsa-miR-302c WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304503 mRNA hsa-miR-302d WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304477 6304503 mRNA hsa-miR-372 WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304477 6304503 mRNA hsa-miR-373 WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304479 6304504 mRNA hsa-miR-20b WFS1 miRanda miRanda
14034 chr4 6304483 6304483 1 + C G rs56072224 6304471 + 6304451 6304491 41 ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGTCTG ACATGGGTGTGCCAGGCTAGACTAGGAGGTTCGGGTGTCTG < 41bp 1 0.642649118717275 1 0.89563000202179 experiment 0.714701762565449 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304471 chr4:6304483 . . 0 hm6A_associated_SNPs_6462 0 0 1 12 6304482 6304503 mRNA hsa-miR-520d-3p WFS1 miRanda miRanda
14034 chr4 6304832 6304832 1 + T C rs71528901 6304850 + 6304830 6304870 41 TCTTGCCTGAATCCATCAGGACTTGGGAAACAGAGAACCCT TCCTGCCTGAATCCATCAGGACTTGGGAAACAGAGAACCCT < 41bp 1 0.705460796095828 1 0.930732607841492 experiment 0.589078407808344 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304850 chr4:6304832 . . 0 hm6A_associated_SNPs_6463 2 0 1 1 6304817 6304837 mRNA hsa-miR-31 WFS1 miRanda miRanda
14034 chr4 6643773 6643773 1 + T C rs72616123 6643783 + 6643763 6643803 41 GCTTTGCTATTTCTTGTGTGACCTGATAGCTCCCTGGAACT GCTTTGCTATCTCTTGTGTGACCTGATAGCTCCCTGGAACT < 41bp 1 0.247033975973793 1 0.881981611251831 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6643783 chr4:6643773 . . 0 hm6A_associated_SNPs_6469 0 0 1 1 6643762 6643784 mRNA hsa-miR-377 MRFAP1 miRanda miRanda
14034 chr4 6643778 6643778 1 + G A rs111368780 6643783 + 6643763 6643803 41 GCTTTGCTATTTCTTGTGTGACCTGATAGCTCCCTGGAACT GCTTTGCTATTTCTTATGTGACCTGATAGCTCCCTGGAACT < 41bp 1 0.251159489544372 1 0.866775393486023 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6643783 chr4:6643778 . . 0 hm6A_associated_SNPs_6470 0 0 1 1 6643762 6643784 mRNA hsa-miR-377 MRFAP1 miRanda miRanda
14034 chr4 6644105 6644105 1 + C G rs550403434 6644122 + 6644102 6644142 41 TGTCTGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTATT TGTGTGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTATT < 41bp 1 0.353572964896252 1 0.941377758979797 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 4 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644122 chr4:6644105 . . 0 hm6A_associated_SNPs_6472 0 0 1 1 6644098 6644119 mRNA hsa-miR-495 MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644122 + 6644102 6644142 41 TGTCTGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTATT TGTCTGGTGAGTTTGTTTGGACAGCCTAACTCAGCTTTATT < 41bp 1 0.33261749297381 1 0.948535799980164 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644122 chr4:6644125 . . 0 hm6A_associated_SNPs_6473 0 0 1 4 6644119 6644140 mRNA hsa-miR-320a MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644122 + 6644102 6644142 41 TGTCTGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTATT TGTCTGGTGAGTTTGTTTGGACAGCCTAACTCAGCTTTATT < 41bp 1 0.33261749297381 1 0.948535799980164 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644122 chr4:6644125 . . 0 hm6A_associated_SNPs_6473 0 0 1 4 6644119 6644140 mRNA hsa-miR-320b MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644122 + 6644102 6644142 41 TGTCTGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTATT TGTCTGGTGAGTTTGTTTGGACAGCCTAACTCAGCTTTATT < 41bp 1 0.33261749297381 1 0.948535799980164 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644122 chr4:6644125 . . 0 hm6A_associated_SNPs_6473 0 0 1 4 6644121 6644140 mRNA hsa-miR-320c MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644122 + 6644102 6644142 41 TGTCTGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTATT TGTCTGGTGAGTTTGTTTGGACAGCCTAACTCAGCTTTATT < 41bp 1 0.33261749297381 1 0.948535799980164 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644122 chr4:6644125 . . 0 hm6A_associated_SNPs_6473 0 0 1 4 6644122 6644140 mRNA hsa-miR-320d MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644145 + 6644125 6644165 41 ACCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG GCCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG < 41bp 1 0.328798019928991 1 0.949352443218231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644145 chr4:6644125 . . 0 hm6A_associated_SNPs_6474 0 0 1 4 6644119 6644140 mRNA hsa-miR-320a MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644145 + 6644125 6644165 41 ACCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG GCCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG < 41bp 1 0.328798019928991 1 0.949352443218231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644145 chr4:6644125 . . 0 hm6A_associated_SNPs_6474 0 0 1 4 6644119 6644140 mRNA hsa-miR-320b MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644145 + 6644125 6644165 41 ACCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG GCCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG < 41bp 1 0.328798019928991 1 0.949352443218231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644145 chr4:6644125 . . 0 hm6A_associated_SNPs_6474 0 0 1 4 6644121 6644140 mRNA hsa-miR-320c MRFAP1 miRanda miRanda
14034 chr4 6644125 6644125 1 + A G rs535325295 6644145 + 6644125 6644165 41 ACCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG GCCTAACTCAGCTTTATTTGACATGGAACCTAAAATAGAAG < 41bp 1 0.328798019928991 1 0.949352443218231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644145 chr4:6644125 . . 0 hm6A_associated_SNPs_6474 0 0 1 4 6644122 6644140 mRNA hsa-miR-320d MRFAP1 miRanda miRanda
14034 chr4 6644292 6644292 1 + T C rs559047901 6644272 + 6644252 6644292 41 CCTTGAGGGGCTTGGGGATGACAGTATGGAACTGTCTGCAT CCTTGAGGGGCTTGGGGATGACAGTATGGAACTGTCTGCAC < 41bp 1 0.390216371391882 1 0.969739139080048 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644272 chr4:6644292 . . 0 hm6A_associated_SNPs_6479 0 0 1 1 6644287 6644309 mRNA hsa-miR-145 MRFAP1 miRanda miRanda
14034 chr4 6644292 6644292 1 + T C rs559047901 6644282 + 6644262 6644302 41 CTTGGGGATGACAGTATGGAACTGTCTGCATTGGACCCTAA CTTGGGGATGACAGTATGGAACTGTCTGCACTGGACCCTAA < 41bp 1 0.434122398405946 1 0.98987865447998 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 31 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644282 chr4:6644292 . . 0 hm6A_associated_SNPs_6480 0 0 1 1 6644287 6644309 mRNA hsa-miR-145 MRFAP1 miRanda miRanda
14034 chr4 6644292 6644292 1 + T C rs559047901 6644296 + 6644276 6644316 41 TATGGAACTGTCTGCATTGGACCCTAAACTGGACTAGAAGA TATGGAACTGTCTGCACTGGACCCTAAACTGGACTAGAAGA < 41bp 1 0.188236244542213 1 0.977918565273285 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644296 chr4:6644292 . . 0 hm6A_associated_SNPs_6481 0 0 1 1 6644287 6644309 mRNA hsa-miR-145 MRFAP1 miRanda miRanda
14034 chr4 6644292 6644292 1 + T C rs559047901 6644303 + 6644283 6644323 41 CTGTCTGCATTGGACCCTAAACTGGACTAGAAGAGGCATCT CTGTCTGCACTGGACCCTAAACTGGACTAGAAGAGGCATCT < 41bp 1 0.175394828817269 1 0.966645002365112 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644303 chr4:6644292 . . 0 hm6A_associated_SNPs_6482 0 0 1 1 6644287 6644309 mRNA hsa-miR-145 MRFAP1 miRanda miRanda
14034 chr4 6644292 6644292 1 + T C rs559047901 6644308 + 6644288 6644328 41 TGCATTGGACCCTAAACTGGACTAGAAGAGGCATCTTCAAG TGCACTGGACCCTAAACTGGACTAGAAGAGGCATCTTCAAG < 41bp 1 0.362408351756621 1 0.971727252006531 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644308 chr4:6644292 . . 0 hm6A_associated_SNPs_6483 0 0 1 1 6644287 6644309 mRNA hsa-miR-145 MRFAP1 miRanda miRanda
14034 chr4 6676937 6676937 1 + G A rs182865838 6676934 + 6676914 6676954 41 GCGCATTCAGTTTGGAAAAGACAGCTTTTCATTAATGTCCC GCGCATTCAGTTTGGAAAAGACAACTTTTCATTAATGTCCC < 41bp 1 0.319957063301519 1 0.946495056152344 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 LOC93622 ENSG00000170846 ncRNA_exonic Human lincRNA chr4:6676934 chr4:6676937 . . 0 hm6A_associated_SNPs_6488 0 0 1 4 6676921 6676942 mRNA hsa-miR-320a LOC93622 miRanda miRanda
14034 chr4 6676937 6676937 1 + G A rs182865838 6676934 + 6676914 6676954 41 GCGCATTCAGTTTGGAAAAGACAGCTTTTCATTAATGTCCC GCGCATTCAGTTTGGAAAAGACAACTTTTCATTAATGTCCC < 41bp 1 0.319957063301519 1 0.946495056152344 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 LOC93622 ENSG00000170846 ncRNA_exonic Human lincRNA chr4:6676934 chr4:6676937 . . 0 hm6A_associated_SNPs_6488 0 0 1 4 6676921 6676942 mRNA hsa-miR-320b LOC93622 miRanda miRanda
14034 chr4 6676937 6676937 1 + G A rs182865838 6676934 + 6676914 6676954 41 GCGCATTCAGTTTGGAAAAGACAGCTTTTCATTAATGTCCC GCGCATTCAGTTTGGAAAAGACAACTTTTCATTAATGTCCC < 41bp 1 0.319957063301519 1 0.946495056152344 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 LOC93622 ENSG00000170846 ncRNA_exonic Human lincRNA chr4:6676934 chr4:6676937 . . 0 hm6A_associated_SNPs_6488 0 0 1 4 6676923 6676942 mRNA hsa-miR-320c LOC93622 miRanda miRanda
14034 chr4 6676937 6676937 1 + G A rs182865838 6676934 + 6676914 6676954 41 GCGCATTCAGTTTGGAAAAGACAGCTTTTCATTAATGTCCC GCGCATTCAGTTTGGAAAAGACAACTTTTCATTAATGTCCC < 41bp 1 0.319957063301519 1 0.946495056152344 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 LOC93622 ENSG00000170846 ncRNA_exonic Human lincRNA chr4:6676934 chr4:6676937 . . 0 hm6A_associated_SNPs_6488 0 0 1 4 6676924 6676942 mRNA hsa-miR-320d LOC93622 miRanda miRanda
14034 chr4 6677118 6677118 1 + C G rs150862619 6677132 + 6677112 6677152 41 AGAGTTCTGCAAGTGAGAAGACACTACATGGTTGCAGCTGC AGAGTTGTGCAAGTGAGAAGACACTACATGGTTGCAGCTGC < 41bp 1 0.350675789659568 1 0.931036770343781 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 LOC93622 ENSG00000170846 ncRNA_exonic Human lincRNA chr4:6677132 chr4:6677118 . . 0 hm6A_associated_SNPs_6491 0 0 1 1 6677116 6677139 mRNA hsa-miR-142-3p LOC93622 miRanda miRanda
14034 chr4 6677430 6677430 1 + A G rs11553058 6677448 + 6677428 6677468 41 CTAGGTACATGTGTTTGCTGACTTTGGGGTAAACAACTTTG CTGGGTACATGTGTTTGCTGACTTTGGGGTAAACAACTTTG < 41bp 1 0.510676491822461 1 0.922372937202454 experiment 0.978647016355078 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 3 LOC93622 ENSG00000170846 ncRNA_exonic Human lincRNA chr4:6677448 chr4:6677430 . . 0 hm6A_associated_SNPs_6492 0 0 1 2 6677427 6677451 mRNA hsa-miR-15b LOC93622 miRanda miRanda
14034 chr4 6677430 6677430 1 + A G rs11553058 6677448 + 6677428 6677468 41 CTAGGTACATGTGTTTGCTGACTTTGGGGTAAACAACTTTG CTGGGTACATGTGTTTGCTGACTTTGGGGTAAACAACTTTG < 41bp 1 0.510676491822461 1 0.922372937202454 experiment 0.978647016355078 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 3 LOC93622 ENSG00000170846 ncRNA_exonic Human lincRNA chr4:6677448 chr4:6677430 . . 0 hm6A_associated_SNPs_6492 0 0 1 2 6677428 6677451 mRNA hsa-miR-424 LOC93622 miRanda miRanda
14034 chr4 6718752 6718752 1 + T C rs142588366 6718759 + 6718739 6718779 41 ATTCAGTGTAGAATGTATAGACTTTATGTCTTCCAAGTTTA ATTCAGTGTAGAACGTATAGACTTTATGTCTTCCAAGTTTA < 41bp 1 0.537685262763998 1 0.992458820343018 experiment 0.924629474472004 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 BLOC1S4 ENSG00000186222 UTR3 Human protein_coding chr4:6718759 chr4:6718752 . . 0 hm6A_associated_SNPs_6499 0 0 1 1 6718750 6718773 mRNA hsa-miR-7 CNO miRanda miRanda
14034 chr4 6718775 6718775 1 + G T rs3172604 6718759 + 6718739 6718779 41 ATTCAGTGTAGAATGTATAGACTTTATGTCTTCCAAGTTTA ATTCAGTGTAGAATGTATAGACTTTATGTCTTCCAATTTTA < 41bp 1 0.52382824834226 1 0.991472840309143 experiment 0.952343503315479 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 37 BLOC1S4 ENSG00000186222 UTR3 Human protein_coding chr4:6718759 chr4:6718775 . . 0 hm6A_associated_SNPs_6500 0 0 1 3 6718774 6718796 mRNA hsa-miR-10a CNO miRanda miRanda
14034 chr4 6718775 6718775 1 + G T rs3172604 6718759 + 6718739 6718779 41 ATTCAGTGTAGAATGTATAGACTTTATGTCTTCCAAGTTTA ATTCAGTGTAGAATGTATAGACTTTATGTCTTCCAATTTTA < 41bp 1 0.52382824834226 1 0.991472840309143 experiment 0.952343503315479 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 37 BLOC1S4 ENSG00000186222 UTR3 Human protein_coding chr4:6718759 chr4:6718775 . . 0 hm6A_associated_SNPs_6500 0 0 1 3 6718774 6718796 mRNA hsa-miR-10b CNO miRanda miRanda
14034 chr4 6718775 6718775 1 + G T rs3172604 6718759 + 6718739 6718779 41 ATTCAGTGTAGAATGTATAGACTTTATGTCTTCCAAGTTTA ATTCAGTGTAGAATGTATAGACTTTATGTCTTCCAATTTTA < 41bp 1 0.52382824834226 1 0.991472840309143 experiment 0.952343503315479 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 37 BLOC1S4 ENSG00000186222 UTR3 Human protein_coding chr4:6718759 chr4:6718775 . . 0 hm6A_associated_SNPs_6500 0 0 1 3 6718772 6718795 mRNA hsa-miR-339-5p CNO miRanda miRanda
14034 chr4 6718775 6718775 1 + G T rs3172604 6718789 + 6718769 6718809 41 TTCCAAGTTTAAAAAAAGAGACAGGGTCTTGGTATGTTGCC TTCCAATTTTAAAAAAAGAGACAGGGTCTTGGTATGTTGCC < 41bp 1 0.427286110302143 1 0.986194908618927 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 BLOC1S4 ENSG00000186222 UTR3 Human protein_coding chr4:6718789 chr4:6718775 . . 0 hm6A_associated_SNPs_6501 0 0 1 3 6718774 6718796 mRNA hsa-miR-10a CNO miRanda miRanda
14034 chr4 6718775 6718775 1 + G T rs3172604 6718789 + 6718769 6718809 41 TTCCAAGTTTAAAAAAAGAGACAGGGTCTTGGTATGTTGCC TTCCAATTTTAAAAAAAGAGACAGGGTCTTGGTATGTTGCC < 41bp 1 0.427286110302143 1 0.986194908618927 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 BLOC1S4 ENSG00000186222 UTR3 Human protein_coding chr4:6718789 chr4:6718775 . . 0 hm6A_associated_SNPs_6501 0 0 1 3 6718774 6718796 mRNA hsa-miR-10b CNO miRanda miRanda
14034 chr4 6718775 6718775 1 + G T rs3172604 6718789 + 6718769 6718809 41 TTCCAAGTTTAAAAAAAGAGACAGGGTCTTGGTATGTTGCC TTCCAATTTTAAAAAAAGAGACAGGGTCTTGGTATGTTGCC < 41bp 1 0.427286110302143 1 0.986194908618927 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 BLOC1S4 ENSG00000186222 UTR3 Human protein_coding chr4:6718789 chr4:6718775 . . 0 hm6A_associated_SNPs_6501 0 0 1 3 6718772 6718795 mRNA hsa-miR-339-5p CNO miRanda miRanda
14034 chr4 6884145 6884145 1 + A G rs542260155 6884165 + 6884145 6884185 41 AAATCTATGATTTGCTTTGAACATTTGGGTTTTGTTGCCTT GAATCTATGATTTGCTTTGAACATTTGGGTTTTGTTGCCTT < 41bp 1 0.524321090433043 1 0.186713755130768 experiment 0.951357819133914 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 KIAA0232 ENSG00000170871 UTR3 Human protein_coding chr4:6884165 chr4:6884145 . . 0 hm6A_associated_SNPs_6506 0 0 1 2 6884134 6884155 mRNA hsa-miR-376a KIAA0232 miRanda miRanda
14034 chr4 6884145 6884145 1 + A G rs542260155 6884165 + 6884145 6884185 41 AAATCTATGATTTGCTTTGAACATTTGGGTTTTGTTGCCTT GAATCTATGATTTGCTTTGAACATTTGGGTTTTGTTGCCTT < 41bp 1 0.524321090433043 1 0.186713755130768 experiment 0.951357819133914 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 KIAA0232 ENSG00000170871 UTR3 Human protein_coding chr4:6884165 chr4:6884145 . . 0 hm6A_associated_SNPs_6506 0 0 1 2 6884133 6884155 mRNA hsa-miR-376b KIAA0232 miRanda miRanda
14034 chr4 7058565 7058565 1 + A C rs554710132 7058545 + 7058525 7058565 41 CTTATGCTGTCTACCACTGAACAGTGATGGAGATGGTGCTA CTTATGCTGTCTACCACTGAACAGTGATGGAGATGGTGCTC < 41bp 1 0.388422939468981 1 0.951726913452148 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 TADA2B ENSG00000173011 UTR3 Human protein_coding chr4:7058545 chr4:7058565 . . 0 hm6A_associated_SNPs_6521 0 0 1 3 7058545 7058565 mRNA hsa-miR-29a TADA2B miRanda miRanda
14034 chr4 7058565 7058565 1 + A C rs554710132 7058545 + 7058525 7058565 41 CTTATGCTGTCTACCACTGAACAGTGATGGAGATGGTGCTA CTTATGCTGTCTACCACTGAACAGTGATGGAGATGGTGCTC < 41bp 1 0.388422939468981 1 0.951726913452148 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 TADA2B ENSG00000173011 UTR3 Human protein_coding chr4:7058545 chr4:7058565 . . 0 hm6A_associated_SNPs_6521 0 0 1 3 7058544 7058565 mRNA hsa-miR-29b TADA2B miRanda miRanda
14034 chr4 7058565 7058565 1 + A C rs554710132 7058545 + 7058525 7058565 41 CTTATGCTGTCTACCACTGAACAGTGATGGAGATGGTGCTA CTTATGCTGTCTACCACTGAACAGTGATGGAGATGGTGCTC < 41bp 1 0.388422939468981 1 0.951726913452148 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 TADA2B ENSG00000173011 UTR3 Human protein_coding chr4:7058545 chr4:7058565 . . 0 hm6A_associated_SNPs_6521 0 0 1 3 7058545 7058565 mRNA hsa-miR-29c TADA2B miRanda miRanda
14034 chr4 15688681 15688681 1 + T C rs1053112 15688698 + 15688678 15688718 41 ATCTGGAATTGTGAATAGTGACAATATTGAGAAAAATACTG ATCCGGAATTGTGAATAGTGACAATATTGAGAAAAATACTG < 41bp 1 0.796134163752473 1 0.940289676189423 experiment 0.407731672495053 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 4 FAM200B ENSG00000237765 CDS Human protein_coding chr4:15688698 chr4:15688681 synonymous SNV . 0 hm6A_associated_SNPs_6532 0 0 1 2 15688681 15688703 mRNA hsa-miR-25 FAM200B miRanda miRanda
14034 chr4 15688681 15688681 1 + T C rs1053112 15688698 + 15688678 15688718 41 ATCTGGAATTGTGAATAGTGACAATATTGAGAAAAATACTG ATCCGGAATTGTGAATAGTGACAATATTGAGAAAAATACTG < 41bp 1 0.796134163752473 1 0.940289676189423 experiment 0.407731672495053 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 4 FAM200B ENSG00000237765 CDS Human protein_coding chr4:15688698 chr4:15688681 synonymous SNV . 0 hm6A_associated_SNPs_6532 0 0 1 2 15688680 15688703 mRNA hsa-miR-367 FAM200B miRanda miRanda
14034 chr4 17609535 17609535 1 + G T rs77958531 17609531 + 17609511 17609551 41 TCAGATTTGTGATGCTAGGAACATGAGCAAACTGAAAATTA TCAGATTTGTGATGCTAGGAACATTAGCAAACTGAAAATTA < 41bp 1 0.573326323070314 1 0.0442920327186584 experiment 0.853347353859371 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 LAP3 ENSG00000249502 ncRNA_intronic Human antisense chr4:17609531 chr4:17609535 . . 0 hm6A_associated_SNPs_6537 0 0 1 1 17609531 17609551 mRNA hsa-miR-590-3p LAP3 miRanda miRanda
14034 chr4 17609535 17609535 1 + G T rs77958531 17609541 + 17609521 17609561 41 GATGCTAGGAACATGAGCAAACTGAAAATTACTATGCACTT GATGCTAGGAACATTAGCAAACTGAAAATTACTATGCACTT < 41bp 1 0.175912932050277 1 0.081603467464447 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 LAP3 ENSG00000249502 ncRNA_intronic Human antisense chr4:17609541 chr4:17609535 . . 0 hm6A_associated_SNPs_6538 0 0 1 1 17609531 17609551 mRNA hsa-miR-590-3p LAP3 miRanda miRanda
14034 chr4 17625658 17625658 1 + A G rs555 17625667 + 17625647 17625687 41 TTGTCTTTAGCAAAGTTTAGACTGTGAATATGATGACACAG TTGTCTTTAGCGAAGTTTAGACTGTGAATATGATGACACAG < 41bp 1 0.437826528836066 1 0.971662521362305 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625667 chr4:17625658 . . 0 hm6A_associated_SNPs_6541 0 0 1 5 17625656 17625674 mRNA hsa-miR-27a MED28 miRanda miRanda
14034 chr4 17625658 17625658 1 + A G rs555 17625667 + 17625647 17625687 41 TTGTCTTTAGCAAAGTTTAGACTGTGAATATGATGACACAG TTGTCTTTAGCGAAGTTTAGACTGTGAATATGATGACACAG < 41bp 1 0.437826528836066 1 0.971662521362305 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625667 chr4:17625658 . . 0 hm6A_associated_SNPs_6541 0 0 1 5 17625653 17625673 mRNA hsa-miR-212 MED28 miRanda miRanda
14034 chr4 17625658 17625658 1 + A G rs555 17625667 + 17625647 17625687 41 TTGTCTTTAGCAAAGTTTAGACTGTGAATATGATGACACAG TTGTCTTTAGCGAAGTTTAGACTGTGAATATGATGACACAG < 41bp 1 0.437826528836066 1 0.971662521362305 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625667 chr4:17625658 . . 0 hm6A_associated_SNPs_6541 0 0 1 5 17625656 17625674 mRNA hsa-miR-27b MED28 miRanda miRanda
14034 chr4 17625658 17625658 1 + A G rs555 17625667 + 17625647 17625687 41 TTGTCTTTAGCAAAGTTTAGACTGTGAATATGATGACACAG TTGTCTTTAGCGAAGTTTAGACTGTGAATATGATGACACAG < 41bp 1 0.437826528836066 1 0.971662521362305 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625667 chr4:17625658 . . 0 hm6A_associated_SNPs_6541 0 0 1 5 17625653 17625673 mRNA hsa-miR-128 MED28 miRanda miRanda
14034 chr4 17625658 17625658 1 + A G rs555 17625667 + 17625647 17625687 41 TTGTCTTTAGCAAAGTTTAGACTGTGAATATGATGACACAG TTGTCTTTAGCGAAGTTTAGACTGTGAATATGATGACACAG < 41bp 1 0.437826528836066 1 0.971662521362305 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625667 chr4:17625658 . . 0 hm6A_associated_SNPs_6541 0 0 1 5 17625653 17625673 mRNA hsa-miR-132 MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625878 17625902 mRNA hsa-let-7a MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625878 17625902 mRNA hsa-let-7b MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625878 17625902 mRNA hsa-let-7c MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625878 17625902 mRNA hsa-let-7d MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625878 17625902 mRNA hsa-let-7e MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625881 17625902 mRNA hsa-let-7f MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625878 17625902 mRNA hsa-miR-98 MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625880 17625901 mRNA hsa-miR-196a MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625875 17625902 mRNA hsa-let-7g MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625881 17625902 mRNA hsa-let-7i MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625880 17625901 mRNA hsa-miR-196b MED28 miRanda miRanda
14034 chr4 17625895 17625895 1 + C T rs7684560 17625887 + 17625867 17625907 41 TAAATTTGCTCTGTTTTAAGACTTTGAACTACCTCAAGAAG TAAATTTGCTCTGTTTTAAGACTTTGAATTACCTCAAGAAG < 41bp 1 0.440035689052449 1 0.751983046531677 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625887 chr4:17625895 . . 0 hm6A_associated_SNPs_6543 0 0 1 12 17625883 17625902 mRNA hsa-miR-202 MED28 miRanda miRanda
14034 chr4 17845470 17845470 1 + C T rs59037741 17845464 + 17845444 17845484 41 GAGGACACATTTAACAAGTAACATTTCTAGGGAAAATGAAG GAGGACACATTTAACAAGTAACATTTTTAGGGAAAATGAAG < 41bp 1 0.195719289460719 1 0.945566654205322 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 LCORL;NCAPG ENSG00000109805;ENSG00000178177 UTR3 Human other chr4:17845464 chr4:17845470 . . 0 hm6A_associated_SNPs_6546 0 0 1 1 17845463 17845486 mRNA hsa-miR-205 NCAPG miRanda miRanda
14034 chr4 20620683 20620683 1 + G A rs1379659 20620690 + 20620670 20620710 41 ATACTTCTTGACCGTGTGGGACTAATGAATGCTTCATAGTG ATACTTCTTGACCATGTGGGACTAATGAATGCTTCATAGTG < 41bp 1 0.201787665601291 1 0.980817317962646 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 SLIT2 ENSG00000145147 UTR3 Human protein_coding chr4:20620690 chr4:20620683 . . 0 hm6A_associated_SNPs_6553 0 1 1 4 20620680 20620702 mRNA hsa-miR-181a SLIT2 miRanda miRanda
14034 chr4 20620683 20620683 1 + G A rs1379659 20620690 + 20620670 20620710 41 ATACTTCTTGACCGTGTGGGACTAATGAATGCTTCATAGTG ATACTTCTTGACCATGTGGGACTAATGAATGCTTCATAGTG < 41bp 1 0.201787665601291 1 0.980817317962646 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 SLIT2 ENSG00000145147 UTR3 Human protein_coding chr4:20620690 chr4:20620683 . . 0 hm6A_associated_SNPs_6553 0 1 1 4 20620679 20620702 mRNA hsa-miR-181b SLIT2 miRanda miRanda
14034 chr4 20620683 20620683 1 + G A rs1379659 20620690 + 20620670 20620710 41 ATACTTCTTGACCGTGTGGGACTAATGAATGCTTCATAGTG ATACTTCTTGACCATGTGGGACTAATGAATGCTTCATAGTG < 41bp 1 0.201787665601291 1 0.980817317962646 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 SLIT2 ENSG00000145147 UTR3 Human protein_coding chr4:20620690 chr4:20620683 . . 0 hm6A_associated_SNPs_6553 0 1 1 4 20620676 20620702 mRNA hsa-miR-181c SLIT2 miRanda miRanda
14034 chr4 20620683 20620683 1 + G A rs1379659 20620690 + 20620670 20620710 41 ATACTTCTTGACCGTGTGGGACTAATGAATGCTTCATAGTG ATACTTCTTGACCATGTGGGACTAATGAATGCTTCATAGTG < 41bp 1 0.201787665601291 1 0.980817317962646 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 SLIT2 ENSG00000145147 UTR3 Human protein_coding chr4:20620690 chr4:20620683 . . 0 hm6A_associated_SNPs_6553 0 1 1 4 20620679 20620702 mRNA hsa-miR-181d SLIT2 miRanda miRanda
14034 chr4 25280345 25280345 1 + C A rs1046023 25280325 + 25280305 25280345 41 ACTACTATCTTTAGATATAAACACTAGTAATTAAAATGTGC ACTACTATCTTTAGATATAAACACTAGTAATTAAAATGTGA < 41bp 1 0.255922600582598 1 0.922623038291931 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 PI4K2B ENSG00000038210 UTR3 Human protein_coding chr4:25280325 chr4:25280345 . . 0 hm6A_associated_SNPs_6557 0 0 1 2 25280330 25280349 mRNA hsa-miR-124 PI4K2B miRanda miRanda
14034 chr4 25280345 25280345 1 + C A rs1046023 25280325 + 25280305 25280345 41 ACTACTATCTTTAGATATAAACACTAGTAATTAAAATGTGC ACTACTATCTTTAGATATAAACACTAGTAATTAAAATGTGA < 41bp 1 0.255922600582598 1 0.922623038291931 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 PI4K2B ENSG00000038210 UTR3 Human protein_coding chr4:25280325 chr4:25280345 . . 0 hm6A_associated_SNPs_6557 0 0 1 2 25280330 25280349 mRNA hsa-miR-506 PI4K2B miRanda miRanda
14034 chr4 26433022 26433022 1 + G A rs367624709 26433003 + 26432983 26433023 41 ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGT ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTAT < 41bp 1 0.554126415290603 1 0.888283848762512 experiment 0.891747169418794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433003 chr4:26433022 . . 0 hm6A_associated_SNPs_6567 0 0 1 7 26433008 26433031 mRNA hsa-miR-21 RBPJ miRanda miRanda
14034 chr4 26433022 26433022 1 + G A rs367624709 26433003 + 26432983 26433023 41 ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGT ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTAT < 41bp 1 0.554126415290603 1 0.888283848762512 experiment 0.891747169418794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433003 chr4:26433022 . . 0 hm6A_associated_SNPs_6567 0 0 1 7 26433012 26433033 mRNA hsa-miR-320a RBPJ miRanda miRanda
14034 chr4 26433022 26433022 1 + G A rs367624709 26433003 + 26432983 26433023 41 ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGT ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTAT < 41bp 1 0.554126415290603 1 0.888283848762512 experiment 0.891747169418794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433003 chr4:26433022 . . 0 hm6A_associated_SNPs_6567 0 0 1 7 26433007 26433031 mRNA hsa-miR-590-5p RBPJ miRanda miRanda
14034 chr4 26433022 26433022 1 + G A rs367624709 26433003 + 26432983 26433023 41 ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGT ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTAT < 41bp 1 0.554126415290603 1 0.888283848762512 experiment 0.891747169418794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433003 chr4:26433022 . . 0 hm6A_associated_SNPs_6567 0 0 1 7 26433012 26433033 mRNA hsa-miR-320b RBPJ miRanda miRanda
14034 chr4 26433022 26433022 1 + G A rs367624709 26433003 + 26432983 26433023 41 ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGT ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTAT < 41bp 1 0.554126415290603 1 0.888283848762512 experiment 0.891747169418794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433003 chr4:26433022 . . 0 hm6A_associated_SNPs_6567 0 0 1 7 26433014 26433033 mRNA hsa-miR-320c RBPJ miRanda miRanda
14034 chr4 26433022 26433022 1 + G A rs367624709 26433003 + 26432983 26433023 41 ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGT ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTAT < 41bp 1 0.554126415290603 1 0.888283848762512 experiment 0.891747169418794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433003 chr4:26433022 . . 0 hm6A_associated_SNPs_6567 0 0 1 7 26433005 26433026 mRNA hsa-miR-300 RBPJ miRanda miRanda
14034 chr4 26433022 26433022 1 + G A rs367624709 26433003 + 26432983 26433023 41 ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGT ATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTAT < 41bp 1 0.554126415290603 1 0.888283848762512 experiment 0.891747169418794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433003 chr4:26433022 . . 0 hm6A_associated_SNPs_6567 0 0 1 7 26433015 26433033 mRNA hsa-miR-320d RBPJ miRanda miRanda
14034 chr4 26435077 26435077 1 + C T rs115663572 26435066 + 26435046 26435086 41 AAAAGAGATACTTTTGAAGAACAAACTATTCCTTACCCATT AAAAGAGATACTTTTGAAGAACAAACTATTCTTTACCCATT < 41bp 1 0.313477035082359 1 0.387574076652527 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26435066 chr4:26435077 . . 0 hm6A_associated_SNPs_6572 0 0 1 1 26435058 26435078 mRNA hsa-miR-613 RBPJ miRanda miRanda
14034 chr4 26435593 26435593 1 + C T rs7684740 26435613 + 26435593 26435633 41 CATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT TATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT < 41bp 1 0.12182517811142 1 0.132156848907471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26435613 chr4:26435593 . . 0 hm6A_associated_SNPs_6573 0 0 1 4 26435587 26435607 mRNA hsa-miR-217 RBPJ miRanda miRanda
14034 chr4 26435593 26435593 1 + C T rs7684740 26435613 + 26435593 26435633 41 CATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT TATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT < 41bp 1 0.12182517811142 1 0.132156848907471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26435613 chr4:26435593 . . 0 hm6A_associated_SNPs_6573 0 0 1 4 26435584 26435605 mRNA hsa-miR-153 RBPJ miRanda miRanda
14034 chr4 26435593 26435593 1 + C T rs7684740 26435613 + 26435593 26435633 41 CATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT TATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT < 41bp 1 0.12182517811142 1 0.132156848907471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26435613 chr4:26435593 . . 0 hm6A_associated_SNPs_6573 0 0 1 4 26435575 26435598 mRNA hsa-miR-376a RBPJ miRanda miRanda
14034 chr4 26435593 26435593 1 + C T rs7684740 26435613 + 26435593 26435633 41 CATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT TATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT < 41bp 1 0.12182517811142 1 0.132156848907471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26435613 chr4:26435593 . . 0 hm6A_associated_SNPs_6573 0 0 1 4 26435574 26435598 mRNA hsa-miR-376b RBPJ miRanda miRanda
14034 chr4 26435627 26435627 1 + G C rs10005515 26435613 + 26435593 26435633 41 CATGACTATGCAGTTTCTAAACATACACATAGAAGCTGAGT CATGACTATGCAGTTTCTAAACATACACATAGAACCTGAGT < 41bp 1 0.13201745189041 1 0.104092180728912 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 35 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26435613 chr4:26435627 . . 0 hm6A_associated_SNPs_6574 0 0 1 1 26435621 26435642 mRNA hsa-miR-383 RBPJ miRanda miRanda
14034 chr4 26436155 26436155 1 + G C rs532525385 26436171 + 26436151 26436191 41 TGTGGGATGGATGGTTAGAAACAATAATATATTAGGGTTTC TGTGCGATGGATGGTTAGAAACAATAATATATTAGGGTTTC < 41bp 1 0.325376346378779 1 0.488891303539276 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26436171 chr4:26436155 . . 0 hm6A_associated_SNPs_6576 0 0 1 1 26436139 26436161 mRNA hsa-miR-324-5p RBPJ miRanda miRanda
14034 chr4 38945279 38945279 1 + A G rs555479927 38945273 + 38945253 38945293 41 CTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTAC CTCTGTGCGCCTGGCCACAGACATCCGTTTGAGGACACTAC < 41bp 1 0.667341085695935 1 0.95185375213623 experiment 0.665317828608129 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945273 chr4:38945279 . . 0 hm6A_associated_SNPs_6590 0 0 1 1 38945272 38945294 mRNA hsa-miR-142-3p FAM114A1 miRanda miRanda
14034 chr4 38945279 38945279 1 + A G rs555479927 38945287 + 38945267 38945307 41 CCACAGACATCCATTTGAGGACACTACAAGCAATTTTGCAC CCACAGACATCCGTTTGAGGACACTACAAGCAATTTTGCAC < 41bp 1 0.792071061950084 1 0.950528562068939 experiment 0.415857876099832 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945287 chr4:38945279 . . 0 hm6A_associated_SNPs_6591 0 0 1 1 38945272 38945294 mRNA hsa-miR-142-3p FAM114A1 miRanda miRanda
14034 chr4 41700107 41700107 1 + T C rs7674006 41700094 + 41700074 41700114 41 TTAGGAGTCTTCAATAAGAGACTTAACATGAGGTATATGGA TTAGGAGTCTTCAATAAGAGACTTAACATGAGGCATATGGA < 41bp 1 0.677841908246001 1 0.0801256597042084 experiment 0.644316183507999 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 LIMCH1 ENSG00000064042 UTR3 Human protein_coding chr4:41700094 chr4:41700107 . . 0 hm6A_associated_SNPs_6622 0 0 1 1 41700090 41700110 mRNA hsa-miR-875-5p LIMCH1 miRanda miRanda
14034 chr4 42088285 42088285 1 + A G rs569661491 42088303 + 42088283 42088323 41 GTAAAGAGCAACTCAGCAGGACACAGAACTAAAACTACTAC GTGAAGAGCAACTCAGCAGGACACAGAACTAAAACTACTAC < 41bp 1 0.761923695170804 1 0.968157052993774 experiment 0.476152609658391 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 3 SLC30A9 ENSG00000014824 UTR3 Human protein_coding chr4:42088303 chr4:42088285 . . 0 hm6A_associated_SNPs_6633 0 0 1 1 42088282 42088303 mRNA hsa-miR-370 SLC30A9 miRanda miRanda
14034 chr4 44682716 44682716 1 + A G rs115253144 44682725 + 44682705 44682745 41 TTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTT TTATAGGGACAGTTGATAAAACAAAGAATAATAAGCAGGTT < 41bp 1 0.594424826630256 1 0.436320126056671 experiment 0.811150346739487 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44682725 chr4:44682716 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_6634 0 0 0 1 44682711 44682731 mRNA hsa-miR-9 GUF1 miRanda miRanda
14034 chr4 44691336 44691336 1 + A G rs201208012 44691333 + 44691313 44691353 41 TCTAGACCAATCTGAATATAACAATCTGAAGAGTGCTATAG TCTAGACCAATCTGAATATAACAGTCTGAAGAGTGCTATAG < 41bp 1 0.597580165982177 1 0.142026454210281 experiment 0.804839668035647 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44691333 chr4:44691336 nonsynonymous SNV 0.992 1 hm6A_associated_SNPs_6635 0 0 1 1 44691319 44691339 mRNA hsa-miR-219-5p GUF1 miRanda miRanda
14034 chr4 48424157 48424157 1 + C G rs142036147 48424156 + 48424136 48424176 41 ACCCTTCACCAGGCTAAAAAACAACTTTTATATGCAGACTG ACCCTTCACCAGGCTAAAAAAGAACTTTTATATGCAGACTG Direct Loss 1 0.782952967726041 1 0.986104607582092 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 SLAIN2 ENSG00000109171 UTR3 Human protein_coding chr4:48424156 chr4:48424157 . . 0 hm6A_associated_SNPs_6637 0 0 1 2 48424136 48424163 mRNA hsa-miR-382 SLAIN2 miRanda miRanda
14034 chr4 48424157 48424157 1 + C G rs142036147 48424156 + 48424136 48424176 41 ACCCTTCACCAGGCTAAAAAACAACTTTTATATGCAGACTG ACCCTTCACCAGGCTAAAAAAGAACTTTTATATGCAGACTG Direct Loss 1 0.782952967726041 1 0.986104607582092 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 SLAIN2 ENSG00000109171 UTR3 Human protein_coding chr4:48424156 chr4:48424157 . . 0 hm6A_associated_SNPs_6637 0 0 1 2 48424151 48424172 mRNA hsa-miR-448 SLAIN2 miRanda miRanda
14034 chr4 52779768 52779768 1 + C A rs191084956 52779752 + 52779732 52779772 41 AGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGA AGACAAACAGATGTCCTAGGACTTTATGCATAGCAGAGAGA < 41bp 1 0.790093638039419 1 0.947577714920044 experiment 0.419812723921161 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 37 DCUN1D4 ENSG00000109184 UTR3 Human protein_coding chr4:52779752 chr4:52779768 . . 0 hm6A_associated_SNPs_6640 0 0 1 1 52779765 52779786 mRNA hsa-miR-194 DCUN1D4 miRanda miRanda
14034 chr4 52779864 52779864 1 + C T rs373532376 52779871 + 52779851 52779891 41 ACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTG ACTGTTTCCCTTTTGCAGGGACATGTTGGTGTTTGCTATTG < 41bp 1 0.695061629653032 1 0.780191957950592 experiment 0.609876740693937 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 DCUN1D4 ENSG00000109184 UTR3 Human protein_coding chr4:52779871 chr4:52779864 . . 0 hm6A_associated_SNPs_6641 0 0 1 1 52779853 52779874 mRNA hsa-miR-874 DCUN1D4 miRanda miRanda
14034 chr4 52961365 52961365 1 + C T rs190223936 52961380 + 52961360 52961400 41 CACTACGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA CACTATGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA < 41bp 1 0.32226335243898 1 0.90971827507019 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 SPATA18 ENSG00000163071 UTR3 Human protein_coding chr4:52961380 chr4:52961365 . . 0 hm6A_associated_SNPs_6643 0 0 1 5 52961347 52961370 mRNA hsa-let-7b SPATA18 miRanda miRanda
14034 chr4 52961365 52961365 1 + C T rs190223936 52961380 + 52961360 52961400 41 CACTACGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA CACTATGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA < 41bp 1 0.32226335243898 1 0.90971827507019 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 SPATA18 ENSG00000163071 UTR3 Human protein_coding chr4:52961380 chr4:52961365 . . 0 hm6A_associated_SNPs_6643 0 0 1 5 52961347 52961370 mRNA hsa-let-7c SPATA18 miRanda miRanda
14034 chr4 52961365 52961365 1 + C T rs190223936 52961380 + 52961360 52961400 41 CACTACGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA CACTATGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA < 41bp 1 0.32226335243898 1 0.90971827507019 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 SPATA18 ENSG00000163071 UTR3 Human protein_coding chr4:52961380 chr4:52961365 . . 0 hm6A_associated_SNPs_6643 0 0 1 5 52961348 52961370 mRNA hsa-let-7g SPATA18 miRanda miRanda
14034 chr4 52961365 52961365 1 + C T rs190223936 52961380 + 52961360 52961400 41 CACTACGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA CACTATGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA < 41bp 1 0.32226335243898 1 0.90971827507019 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 SPATA18 ENSG00000163071 UTR3 Human protein_coding chr4:52961380 chr4:52961365 . . 0 hm6A_associated_SNPs_6643 0 0 1 5 52961348 52961370 mRNA hsa-let-7i SPATA18 miRanda miRanda
14034 chr4 52961365 52961365 1 + C T rs190223936 52961380 + 52961360 52961400 41 CACTACGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA CACTATGCTCTTTTATGGGAACTGTGTGAACTGAAGTGGAA < 41bp 1 0.32226335243898 1 0.90971827507019 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 SPATA18 ENSG00000163071 UTR3 Human protein_coding chr4:52961380 chr4:52961365 . . 0 hm6A_associated_SNPs_6643 0 0 1 5 52961344 52961366 mRNA hsa-miR-142-3p SPATA18 miRanda miRanda
14034 chr4 53580194 53580194 1 + A G rs10033218 53580195 + 53580175 53580215 41 GTGGTAAAGTTAATTGACTAACAACCCCAGGGTCTCTCTCC GTGGTAAAGTTAATTGACTGACAACCCCAGGGTCTCTCTCC < 41bp 1 0.0986863429807648 1 0.0408875048160553 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 20 DANCR ENSG00000226950 ncRNA_exonic Human processed_transcript chr4:53580195 chr4:53580194 . . 0 hm6A_associated_SNPs_6645 0 0 1 1 53580188 53580209 mRNA hsa-miR-504 KIAA0114 miRanda miRanda
14034 chr4 55161445 55161445 1 + G A rs148697831 55161426 + 55161406 55161446 41 CTCTTCAGACCTGGTGGAAGACAGCTTCCTGTAACTGGCGG CTCTTCAGACCTGGTGGAAGACAGCTTCCTGTAACTGGCAG < 41bp 1 0.183207974660648 1 0.998653054237366 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 40 PDGFRA ENSG00000134853 UTR3 Human protein_coding chr4:55161426 chr4:55161445 . . 0 hm6A_associated_SNPs_6647 0 0 0 1 55161444 55161467 mRNA hsa-miR-491-5p PDGFRA miRanda miRanda
14034 chr4 56897728 56897728 1 + C T rs73817313 56897722 + 56897702 56897742 41 TGTATATTTTCATATATATGACAGAACAAGAATATGTATTA TGTATATTTTCATATATATGACAGAATAAGAATATGTATTA < 41bp 1 0.104656953685275 1 0.0377815961837769 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CEP135 ENSG00000174799 UTR3 Human protein_coding chr4:56897722 chr4:56897728 . . 0 hm6A_associated_SNPs_6655 0 0 1 1 56897705 56897728 mRNA hsa-miR-544 CEP135 miRanda miRanda
14034 chr4 56898216 56898216 1 + A G rs185339943 56898206 + 56898186 56898226 41 TAACACAAATTCAAAAGCAAACTAAAAGCTATATGCAGAGT TAACACAAATTCAAAAGCAAACTAAAAGCTGTATGCAGAGT < 41bp 1 0.0873596323922132 1 0.476949095726013 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 CEP135 ENSG00000174799 UTR3 Human protein_coding chr4:56898206 chr4:56898216 . . 0 hm6A_associated_SNPs_6656 0 0 0 1 56898202 56898223 mRNA hsa-miR-448 CEP135 miRanda miRanda
14034 chr4 57194121 57194121 1 + G C rs146789707 57194110 + 57194090 57194130 41 CTCCAAAATAATGTTTAGAAACTGAACTGGTGGTGTTCATT CTCCAAAATAATGTTTAGAAACTGAACTGGTCGTGTTCATT < 41bp 1 0.631891867318458 1 0.894477963447571 experiment 0.736216265363083 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 KIAA1211 ENSG00000109265 UTR3 Human protein_coding chr4:57194110 chr4:57194121 . . 0 hm6A_associated_SNPs_6657 0 0 0 2 57194107 57194130 mRNA hsa-miR-425 KIAA1211 miRanda miRanda
14034 chr4 57194121 57194121 1 + G C rs146789707 57194110 + 57194090 57194130 41 CTCCAAAATAATGTTTAGAAACTGAACTGGTGGTGTTCATT CTCCAAAATAATGTTTAGAAACTGAACTGGTCGTGTTCATT < 41bp 1 0.631891867318458 1 0.894477963447571 experiment 0.736216265363083 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 KIAA1211 ENSG00000109265 UTR3 Human protein_coding chr4:57194110 chr4:57194121 . . 0 hm6A_associated_SNPs_6657 0 0 0 2 57194104 57194126 mRNA hsa-miR-329 KIAA1211 miRanda miRanda
14034 chr4 57194121 57194121 1 + G C rs146789707 57194115 + 57194095 57194135 41 AAATAATGTTTAGAAACTGAACTGGTGGTGTTCATTGTAAA AAATAATGTTTAGAAACTGAACTGGTCGTGTTCATTGTAAA < 41bp 1 0.65315444666698 1 0.891903579235077 experiment 0.69369110666604 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 KIAA1211 ENSG00000109265 UTR3 Human protein_coding chr4:57194115 chr4:57194121 . . 0 hm6A_associated_SNPs_6658 0 0 0 2 57194107 57194130 mRNA hsa-miR-425 KIAA1211 miRanda miRanda
14034 chr4 57194121 57194121 1 + G C rs146789707 57194115 + 57194095 57194135 41 AAATAATGTTTAGAAACTGAACTGGTGGTGTTCATTGTAAA AAATAATGTTTAGAAACTGAACTGGTCGTGTTCATTGTAAA < 41bp 1 0.65315444666698 1 0.891903579235077 experiment 0.69369110666604 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 KIAA1211 ENSG00000109265 UTR3 Human protein_coding chr4:57194115 chr4:57194121 . . 0 hm6A_associated_SNPs_6658 0 0 0 2 57194104 57194126 mRNA hsa-miR-329 KIAA1211 miRanda miRanda
14034 chr4 57368807 57368807 1 + C T rs10518 57368804 + 57368784 57368824 41 TGTAAGAAGTTCACTCTTAGACCCAGTGTTCTGAGGTCACA TGTAAGAAGTTCACTCTTAGACCTAGTGTTCTGAGGTCACA < 41bp 1 0.118174583865784 1 0.569375336170197 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368804 chr4:57368807 . . 0 hm6A_associated_SNPs_6666 1 0 1 2 57368791 57368814 mRNA hsa-miR-141 SRP72 miRanda miRanda
14034 chr4 57368807 57368807 1 + C T rs10518 57368804 + 57368784 57368824 41 TGTAAGAAGTTCACTCTTAGACCCAGTGTTCTGAGGTCACA TGTAAGAAGTTCACTCTTAGACCTAGTGTTCTGAGGTCACA < 41bp 1 0.118174583865784 1 0.569375336170197 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368804 chr4:57368807 . . 0 hm6A_associated_SNPs_6666 1 0 1 2 57368791 57368814 mRNA hsa-miR-200a SRP72 miRanda miRanda
14034 chr4 57368852 57368852 1 + A G rs372552302 57368834 + 57368814 57368854 41 CTGAGGTCACATGGGTTTGGACTGTCTCAATCAGAAAGATT CTGAGGTCACATGGGTTTGGACTGTCTCAATCAGAAAGGTT < 41bp 1 0.379233349297695 1 0.950299620628357 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368834 chr4:57368852 . . 0 hm6A_associated_SNPs_6667 0 0 1 2 57368845 57368865 mRNA hsa-miR-212 SRP72 miRanda miRanda
14034 chr4 57368852 57368852 1 + A G rs372552302 57368834 + 57368814 57368854 41 CTGAGGTCACATGGGTTTGGACTGTCTCAATCAGAAAGATT CTGAGGTCACATGGGTTTGGACTGTCTCAATCAGAAAGGTT < 41bp 1 0.379233349297695 1 0.950299620628357 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368834 chr4:57368852 . . 0 hm6A_associated_SNPs_6667 0 0 1 2 57368844 57368865 mRNA hsa-miR-132 SRP72 miRanda miRanda
14034 chr4 57368852 57368852 1 + A G rs372552302 57368872 + 57368852 57368892 41 ATTAATGACTGTTATCAAGAACATGAACATTGGCTTCCTCC GTTAATGACTGTTATCAAGAACATGAACATTGGCTTCCTCC < 41bp 1 0.436795990144564 1 0.873191952705383 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368872 chr4:57368852 . . 0 hm6A_associated_SNPs_6668 0 0 1 2 57368845 57368865 mRNA hsa-miR-212 SRP72 miRanda miRanda
14034 chr4 57368852 57368852 1 + A G rs372552302 57368872 + 57368852 57368892 41 ATTAATGACTGTTATCAAGAACATGAACATTGGCTTCCTCC GTTAATGACTGTTATCAAGAACATGAACATTGGCTTCCTCC < 41bp 1 0.436795990144564 1 0.873191952705383 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368872 chr4:57368852 . . 0 hm6A_associated_SNPs_6668 0 0 1 2 57368844 57368865 mRNA hsa-miR-132 SRP72 miRanda miRanda
14034 chr4 57368857 57368857 1 + T A rs555106618 57368872 + 57368852 57368892 41 ATTAATGACTGTTATCAAGAACATGAACATTGGCTTCCTCC ATTAAAGACTGTTATCAAGAACATGAACATTGGCTTCCTCC < 41bp 1 0.454842284645616 1 0.945138990879059 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 6 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368872 chr4:57368857 . . 0 hm6A_associated_SNPs_6669 0 0 1 2 57368845 57368865 mRNA hsa-miR-212 SRP72 miRanda miRanda
14034 chr4 57368857 57368857 1 + T A rs555106618 57368872 + 57368852 57368892 41 ATTAATGACTGTTATCAAGAACATGAACATTGGCTTCCTCC ATTAAAGACTGTTATCAAGAACATGAACATTGGCTTCCTCC < 41bp 1 0.454842284645616 1 0.945138990879059 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 6 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368872 chr4:57368857 . . 0 hm6A_associated_SNPs_6669 0 0 1 2 57368844 57368865 mRNA hsa-miR-132 SRP72 miRanda miRanda
14034 chr4 57369244 57369244 1 + C T rs147504491 57369253 + 57369233 57369273 41 ATAAAGTGCTGCTGTGTTTGACTCTGAACATACTACCAAAA ATAAAGTGCTGTTGTGTTTGACTCTGAACATACTACCAAAA < 41bp 1 0.277802086315545 1 0.80036473274231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57369253 chr4:57369244 . . 0 hm6A_associated_SNPs_6670 0 0 1 6 57369225 57369246 mRNA hsa-miR-15a SRP72 miRanda miRanda
14034 chr4 57369244 57369244 1 + C T rs147504491 57369253 + 57369233 57369273 41 ATAAAGTGCTGCTGTGTTTGACTCTGAACATACTACCAAAA ATAAAGTGCTGTTGTGTTTGACTCTGAACATACTACCAAAA < 41bp 1 0.277802086315545 1 0.80036473274231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57369253 chr4:57369244 . . 0 hm6A_associated_SNPs_6670 0 0 1 6 57369225 57369246 mRNA hsa-miR-16 SRP72 miRanda miRanda
14034 chr4 57369244 57369244 1 + C T rs147504491 57369253 + 57369233 57369273 41 ATAAAGTGCTGCTGTGTTTGACTCTGAACATACTACCAAAA ATAAAGTGCTGTTGTGTTTGACTCTGAACATACTACCAAAA < 41bp 1 0.277802086315545 1 0.80036473274231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57369253 chr4:57369244 . . 0 hm6A_associated_SNPs_6670 0 0 1 6 57369225 57369246 mRNA hsa-miR-15b SRP72 miRanda miRanda
14034 chr4 57369244 57369244 1 + C T rs147504491 57369253 + 57369233 57369273 41 ATAAAGTGCTGCTGTGTTTGACTCTGAACATACTACCAAAA ATAAAGTGCTGTTGTGTTTGACTCTGAACATACTACCAAAA < 41bp 1 0.277802086315545 1 0.80036473274231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57369253 chr4:57369244 . . 0 hm6A_associated_SNPs_6670 0 0 1 6 57369226 57369246 mRNA hsa-miR-195 SRP72 miRanda miRanda
14034 chr4 57369244 57369244 1 + C T rs147504491 57369253 + 57369233 57369273 41 ATAAAGTGCTGCTGTGTTTGACTCTGAACATACTACCAAAA ATAAAGTGCTGTTGTGTTTGACTCTGAACATACTACCAAAA < 41bp 1 0.277802086315545 1 0.80036473274231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57369253 chr4:57369244 . . 0 hm6A_associated_SNPs_6670 0 0 1 6 57369225 57369246 mRNA hsa-miR-424 SRP72 miRanda miRanda
14034 chr4 57369244 57369244 1 + C T rs147504491 57369253 + 57369233 57369273 41 ATAAAGTGCTGCTGTGTTTGACTCTGAACATACTACCAAAA ATAAAGTGCTGTTGTGTTTGACTCTGAACATACTACCAAAA < 41bp 1 0.277802086315545 1 0.80036473274231 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57369253 chr4:57369244 . . 0 hm6A_associated_SNPs_6670 0 0 1 6 57369226 57369246 mRNA hsa-miR-497 SRP72 miRanda miRanda
14034 chr4 57897231 57897231 1 + A G rs538634804 57897228 + 57897208 57897248 41 TGTGTGGCTTTTTAAAAATGACAAATATGTACTGTGTTGTG TGTGTGGCTTTTTAAAAATGACAGATATGTACTGTGTTGTG < 41bp 1 0.486436945809797 1 0.107607871294022 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 POLR2B ENSG00000047315;ENSG00000163453 UTR3 Human other chr4:57897228 chr4:57897231 . . 0 hm6A_associated_SNPs_6677 0 0 1 3 57897222 57897243 mRNA hsa-miR-101 POLR2B miRanda miRanda
14034 chr4 57897231 57897231 1 + A G rs538634804 57897228 + 57897208 57897248 41 TGTGTGGCTTTTTAAAAATGACAAATATGTACTGTGTTGTG TGTGTGGCTTTTTAAAAATGACAGATATGTACTGTGTTGTG < 41bp 1 0.486436945809797 1 0.107607871294022 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 POLR2B ENSG00000047315;ENSG00000163453 UTR3 Human other chr4:57897228 chr4:57897231 . . 0 hm6A_associated_SNPs_6677 0 0 1 3 57897225 57897243 mRNA hsa-miR-144 POLR2B miRanda miRanda
14034 chr4 57897231 57897231 1 + A G rs538634804 57897228 + 57897208 57897248 41 TGTGTGGCTTTTTAAAAATGACAAATATGTACTGTGTTGTG TGTGTGGCTTTTTAAAAATGACAGATATGTACTGTGTTGTG < 41bp 1 0.486436945809797 1 0.107607871294022 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 POLR2B ENSG00000047315;ENSG00000163453 UTR3 Human other chr4:57897228 chr4:57897231 . . 0 hm6A_associated_SNPs_6677 0 0 1 3 57897227 57897250 mRNA hsa-miR-377 POLR2B miRanda miRanda
14034 chr4 62936638 62936638 1 + G A rs534180291 62936656 + 62936636 62936676 41 CAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACT CAAAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACT < 41bp 1 0.0615341852025301 1 0.990073263645172 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 ADGRL3 ENSG00000150471 UTR3 Human protein_coding chr4:62936656 chr4:62936638 . . 0 hm6A_associated_SNPs_6679 0 0 0 1 62936627 62936639 mRNA hsa-miR-599 LPHN3 miRanda miRanda
14034 chr4 62936639 62936639 1 + A C rs185254827 62936656 + 62936636 62936676 41 CAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACT CAGCAATTGGAACCAACAAAACTGCTAACACCTTGTTGACT < 41bp 1 0.0703509959804343 1 0.992682099342346 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 ADGRL3 ENSG00000150471 UTR3 Human protein_coding chr4:62936656 chr4:62936639 . . 0 hm6A_associated_SNPs_6680 0 0 0 1 62936627 62936639 mRNA hsa-miR-599 LPHN3 miRanda miRanda
14034 chr4 71556139 71556139 1 + A G rs187936171 71556155 + 71556135 71556175 41 ATAAAGAGAATGCATCTTTGACAGTTATCTTATTTGTAAGG ATAAGGAGAATGCATCTTTGACAGTTATCTTATTTGTAAGG < 41bp 1 0.471891085042852 1 0.139488935470581 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 UTP3 ENSG00000132467 UTR3 Human protein_coding chr4:71556155 chr4:71556139 . . 0 hm6A_associated_SNPs_6686 0 0 1 1 71556131 71556154 mRNA hsa-miR-519d UTP3 miRanda miRanda
14034 chr4 75252179 75252179 1 + A C rs1017732 75252159 + 75252139 75252179 41 AGGAAAATAAACAGACAAAAACAAGTAAATATATATGGTCA AGGAAAATAAACAGACAAAAACAAGTAAATATATATGGTCC < 41bp 1 0.0196722218904085 1 0.000859886407852173 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 EREG ENSG00000124882 UTR3 Human protein_coding chr4:75252159 chr4:75252179 . . 0 hm6A_associated_SNPs_6707 0 0 0 3 75252159 75252180 mRNA hsa-miR-192 EREG miRanda miRanda
14034 chr4 75252179 75252179 1 + A C rs1017732 75252159 + 75252139 75252179 41 AGGAAAATAAACAGACAAAAACAAGTAAATATATATGGTCA AGGAAAATAAACAGACAAAAACAAGTAAATATATATGGTCC < 41bp 1 0.0196722218904085 1 0.000859886407852173 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 EREG ENSG00000124882 UTR3 Human protein_coding chr4:75252159 chr4:75252179 . . 0 hm6A_associated_SNPs_6707 0 0 0 3 75252159 75252180 mRNA hsa-miR-215 EREG miRanda miRanda
14034 chr4 75252179 75252179 1 + A C rs1017732 75252159 + 75252139 75252179 41 AGGAAAATAAACAGACAAAAACAAGTAAATATATATGGTCA AGGAAAATAAACAGACAAAAACAAGTAAATATATATGGTCC < 41bp 1 0.0196722218904085 1 0.000859886407852173 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 EREG ENSG00000124882 UTR3 Human protein_coding chr4:75252159 chr4:75252179 . . 0 hm6A_associated_SNPs_6707 0 0 0 3 75252176 75252199 mRNA hsa-miR-374a EREG miRanda miRanda
14034 chr4 75253323 75253323 1 + A G rs72859385 75253337 + 75253317 75253357 41 GTGAGGATGGTGCTGAGTAAACATAAAAACTGATTTGCTCT GTGAGGGTGGTGCTGAGTAAACATAAAAACTGATTTGCTCT < 41bp 1 0.0276311262686359 1 0.000118464231491089 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 EREG ENSG00000124882 UTR3 Human protein_coding chr4:75253337 chr4:75253323 . . 0 hm6A_associated_SNPs_6708 0 0 0 3 75253310 75253331 mRNA hsa-miR-29a EREG miRanda miRanda
14034 chr4 75253323 75253323 1 + A G rs72859385 75253337 + 75253317 75253357 41 GTGAGGATGGTGCTGAGTAAACATAAAAACTGATTTGCTCT GTGAGGGTGGTGCTGAGTAAACATAAAAACTGATTTGCTCT < 41bp 1 0.0276311262686359 1 0.000118464231491089 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 EREG ENSG00000124882 UTR3 Human protein_coding chr4:75253337 chr4:75253323 . . 0 hm6A_associated_SNPs_6708 0 0 0 3 75253309 75253331 mRNA hsa-miR-29b EREG miRanda miRanda
14034 chr4 75253323 75253323 1 + A G rs72859385 75253337 + 75253317 75253357 41 GTGAGGATGGTGCTGAGTAAACATAAAAACTGATTTGCTCT GTGAGGGTGGTGCTGAGTAAACATAAAAACTGATTTGCTCT < 41bp 1 0.0276311262686359 1 0.000118464231491089 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 EREG ENSG00000124882 UTR3 Human protein_coding chr4:75253337 chr4:75253323 . . 0 hm6A_associated_SNPs_6708 0 0 0 3 75253310 75253331 mRNA hsa-miR-29c EREG miRanda miRanda
14034 chr4 76442052 76442052 1 + G A rs34942800 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCAG < 41bp 1 0.455847675549484 1 0.413754165172577 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 40 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442052 nonsynonymous SNV 0.979 1 hm6A_associated_SNPs_6718 0 0 1 1 76442043 76442064 mRNA hsa-miR-150 THAP6 miRanda miRanda
14034 chr4 76453125 76453125 1 + C A rs564146701 76453107 + 76453087 76453127 41 ACCAGAATAGCTTTAAAAAGACAAAAAGGATCGTAGATCTG ACCAGAATAGCTTTAAAAAGACAAAAAGGATCGTAGATATG < 41bp 1 0.11853150840818 1 0.0857333540916443 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 THAP6 ENSG00000174796 UTR3 Human protein_coding chr4:76453107 chr4:76453125 . . 0 hm6A_associated_SNPs_6719 0 0 1 2 76453121 76453149 mRNA hsa-miR-29b THAP6 miRanda miRanda
14034 chr4 76453125 76453125 1 + C A rs564146701 76453107 + 76453087 76453127 41 ACCAGAATAGCTTTAAAAAGACAAAAAGGATCGTAGATCTG ACCAGAATAGCTTTAAAAAGACAAAAAGGATCGTAGATATG < 41bp 1 0.11853150840818 1 0.0857333540916443 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 THAP6 ENSG00000174796 UTR3 Human protein_coding chr4:76453107 chr4:76453125 . . 0 hm6A_associated_SNPs_6719 0 0 1 2 76453122 76453149 mRNA hsa-miR-29c THAP6 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734555 + 76734535 76734575 41 ATTTAGAAACCAGGTGGAAAACATTCACTATTAAGACTATT ATTTAGAAGCCAGGTGGAAAACATTCACTATTAAGACTATT < 41bp 1 0.644305954653526 1 0.994530439376831 experiment 0.711388090692947 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 9 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734555 chr4:76734543 . . 0 hm6A_associated_SNPs_6724 0 0 1 4 76734541 76734562 mRNA hsa-miR-1 USO1 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734555 + 76734535 76734575 41 ATTTAGAAACCAGGTGGAAAACATTCACTATTAAGACTATT ATTTAGAAGCCAGGTGGAAAACATTCACTATTAAGACTATT < 41bp 1 0.644305954653526 1 0.994530439376831 experiment 0.711388090692947 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 9 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734555 chr4:76734543 . . 0 hm6A_associated_SNPs_6724 0 0 1 4 76734541 76734562 mRNA hsa-miR-206 USO1 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734555 + 76734535 76734575 41 ATTTAGAAACCAGGTGGAAAACATTCACTATTAAGACTATT ATTTAGAAGCCAGGTGGAAAACATTCACTATTAAGACTATT < 41bp 1 0.644305954653526 1 0.994530439376831 experiment 0.711388090692947 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 9 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734555 chr4:76734543 . . 0 hm6A_associated_SNPs_6724 0 0 1 4 76734530 76734551 mRNA hsa-miR-490-3p USO1 miRanda miRanda
14034 chr4 76734543 76734543 1 + A G rs544003160 76734555 + 76734535 76734575 41 ATTTAGAAACCAGGTGGAAAACATTCACTATTAAGACTATT ATTTAGAAGCCAGGTGGAAAACATTCACTATTAAGACTATT < 41bp 1 0.644305954653526 1 0.994530439376831 experiment 0.711388090692947 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 9 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734555 chr4:76734543 . . 0 hm6A_associated_SNPs_6724 0 0 1 4 76734543 76734562 mRNA hsa-miR-613 USO1 miRanda miRanda
14034 chr4 76734651 76734651 1 + T C rs184457340 76734664 + 76734644 76734684 41 TTTTATTTAAATCCATCTGAACTGTCCCAAAATGTAATTTG TTTTATTCAAATCCATCTGAACTGTCCCAAAATGTAATTTG < 41bp 1 0.422826313725278 1 0.980337500572205 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734664 chr4:76734651 . . 0 hm6A_associated_SNPs_6725 0 0 1 1 76734637 76734658 mRNA hsa-miR-876-5p USO1 miRanda miRanda
14034 chr4 76734727 76734727 1 + T C rs13131442 76734732 + 76734712 76734752 41 CCATTTTAAGGCATGTGGTGACAATGCTATTTGCCTTAGTT CCATTTTAAGGCATGCGGTGACAATGCTATTTGCCTTAGTT < 41bp 1 0.718639773623726 1 0.864702820777893 experiment 0.562720452752548 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734732 chr4:76734727 . . 0 hm6A_associated_SNPs_6726 0 0 1 3 76734720 76734740 mRNA hsa-miR-33a USO1 miRanda miRanda
14034 chr4 76734727 76734727 1 + T C rs13131442 76734732 + 76734712 76734752 41 CCATTTTAAGGCATGTGGTGACAATGCTATTTGCCTTAGTT CCATTTTAAGGCATGCGGTGACAATGCTATTTGCCTTAGTT < 41bp 1 0.718639773623726 1 0.864702820777893 experiment 0.562720452752548 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734732 chr4:76734727 . . 0 hm6A_associated_SNPs_6726 0 0 1 3 76734712 76734733 mRNA hsa-miR-197 USO1 miRanda miRanda
14034 chr4 76734727 76734727 1 + T C rs13131442 76734732 + 76734712 76734752 41 CCATTTTAAGGCATGTGGTGACAATGCTATTTGCCTTAGTT CCATTTTAAGGCATGCGGTGACAATGCTATTTGCCTTAGTT < 41bp 1 0.718639773623726 1 0.864702820777893 experiment 0.562720452752548 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76734732 chr4:76734727 . . 0 hm6A_associated_SNPs_6726 0 0 1 3 76734721 76734740 mRNA hsa-miR-33b USO1 miRanda miRanda
14034 chr4 77700405 77700405 1 + A G rs190744440 77700418 + 77700398 77700438 41 CAGTACAAACCACTGTTTGAACTATCTGGGTTATTGGTGTT CAGTACAGACCACTGTTTGAACTATCTGGGTTATTGGTGTT < 41bp 1 0.727567123200668 1 0.946653366088867 experiment 0.544865753598663 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 SHROOM3 ENSG00000224218 ncRNA_intronic Human antisense chr4:77700418 chr4:77700405 . . 0 hm6A_associated_SNPs_6733 0 0 1 1 77700390 77700412 mRNA hsa-miR-140-5p SHROOM3 miRanda miRanda
14034 chr4 77700427 77700427 1 + G A rs573466721 77700418 + 77700398 77700438 41 CAGTACAAACCACTGTTTGAACTATCTGGGTTATTGGTGTT CAGTACAAACCACTGTTTGAACTATCTGGATTATTGGTGTT < 41bp 1 0.714878801516469 1 0.961429178714752 experiment 0.570242396967062 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 SHROOM3 ENSG00000224218 ncRNA_intronic Human antisense chr4:77700418 chr4:77700427 . . 0 hm6A_associated_SNPs_6734 0 0 1 1 77700427 77700447 mRNA hsa-miR-873 SHROOM3 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087284 78087306 mRNA hsa-miR-17 CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087284 78087306 mRNA hsa-miR-20a CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087284 78087306 mRNA hsa-miR-93 CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087284 78087306 mRNA hsa-miR-106a CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087282 78087304 mRNA hsa-miR-130a CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087286 78087306 mRNA hsa-miR-106b CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087275 78087304 mRNA hsa-miR-301a CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087282 78087304 mRNA hsa-miR-130b CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087284 78087306 mRNA hsa-miR-20b CCNG2 miRanda miRanda
14034 chr4 78087295 78087295 1 + A G rs549177951 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACGTTGGCACTTTATTTTTCT Direct Loss 1 0.559570879254051 1 0.0238928496837616 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087295 . . 0 hm6A_associated_SNPs_6749 0 0 1 10 78087285 78087306 mRNA hsa-miR-519d CCNG2 miRanda miRanda
14034 chr4 78087306 78087306 1 + A G rs4150094 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACATTGGCACTTTGTTTTTCT < 41bp 1 0.683800540396201 1 0.0338941514492035 experiment 0.632398919207597 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087306 . . 0 hm6A_associated_SNPs_6750 0 0 1 7 78087284 78087306 mRNA hsa-miR-17 CCNG2 miRanda miRanda
14034 chr4 78087306 78087306 1 + A G rs4150094 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACATTGGCACTTTGTTTTTCT < 41bp 1 0.683800540396201 1 0.0338941514492035 experiment 0.632398919207597 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087306 . . 0 hm6A_associated_SNPs_6750 0 0 1 7 78087284 78087306 mRNA hsa-miR-20a CCNG2 miRanda miRanda
14034 chr4 78087306 78087306 1 + A G rs4150094 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACATTGGCACTTTGTTTTTCT < 41bp 1 0.683800540396201 1 0.0338941514492035 experiment 0.632398919207597 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087306 . . 0 hm6A_associated_SNPs_6750 0 0 1 7 78087284 78087306 mRNA hsa-miR-93 CCNG2 miRanda miRanda
14034 chr4 78087306 78087306 1 + A G rs4150094 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACATTGGCACTTTGTTTTTCT < 41bp 1 0.683800540396201 1 0.0338941514492035 experiment 0.632398919207597 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087306 . . 0 hm6A_associated_SNPs_6750 0 0 1 7 78087284 78087306 mRNA hsa-miR-106a CCNG2 miRanda miRanda
14034 chr4 78087306 78087306 1 + A G rs4150094 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACATTGGCACTTTGTTTTTCT < 41bp 1 0.683800540396201 1 0.0338941514492035 experiment 0.632398919207597 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087306 . . 0 hm6A_associated_SNPs_6750 0 0 1 7 78087286 78087306 mRNA hsa-miR-106b CCNG2 miRanda miRanda
14034 chr4 78087306 78087306 1 + A G rs4150094 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACATTGGCACTTTGTTTTTCT < 41bp 1 0.683800540396201 1 0.0338941514492035 experiment 0.632398919207597 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087306 . . 0 hm6A_associated_SNPs_6750 0 0 1 7 78087284 78087306 mRNA hsa-miR-20b CCNG2 miRanda miRanda
14034 chr4 78087306 78087306 1 + A G rs4150094 78087293 + 78087273 78087313 41 AACCATTAACAGTACTTTAGACATTGGCACTTTATTTTTCT AACCATTAACAGTACTTTAGACATTGGCACTTTGTTTTTCT < 41bp 1 0.683800540396201 1 0.0338941514492035 experiment 0.632398919207597 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087293 chr4:78087306 . . 0 hm6A_associated_SNPs_6750 0 0 1 7 78087285 78087306 mRNA hsa-miR-519d CCNG2 miRanda miRanda
14034 chr4 78087664 78087664 1 + A G rs562969490 78087645 + 78087625 78087665 41 ATTTGGGAATTATAATATTGACATTTCTGTGATTTTTATAT ATTTGGGAATTATAATATTGACATTTCTGTGATTTTTATGT < 41bp 1 0.544789070405758 1 0.270860850811005 experiment 0.910421859188484 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087645 chr4:78087664 . . 0 hm6A_associated_SNPs_6752 0 0 1 1 78087660 78087679 mRNA hsa-miR-499-5p CCNG2 miRanda miRanda
14034 chr4 79780760 79780760 1 + G A rs117063609 79780763 + 79780743 79780783 41 ATGCTTGAACCAGATCCGGAACATAGACCTGATATATTTCA ATGCTTGAACCAGATCCAGAACATAGACCTGATATATTTCA < 41bp 1 0.557802363464993 1 0.129528939723969 experiment 0.884395273070014 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 BMP2K ENSG00000138756 CDS Human protein_coding chr4:79780763 chr4:79780760 synonymous SNV . 0 hm6A_associated_SNPs_6761 0 0 1 1 79780756 79780777 mRNA hsa-miR-361-5p BMP2K miRanda miRanda
14034 chr4 84526197 84526197 1 + A T rs185813917 84526185 + 84526165 84526205 41 AAATGATGGCATCACTGTGGACTGAATGAAATATTTGTATA AAATGATGGCATCACTGTGGACTGAATGAAATTTTTGTATA < 41bp 1 0.345253080562356 1 0.959791362285614 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 GPAT3 ENSG00000138678 UTR3 Human protein_coding chr4:84526185 chr4:84526197 . . 0 hm6A_associated_SNPs_6767 0 0 1 2 84526184 84526205 mRNA hsa-miR-381 AGPAT9 miRanda miRanda
14034 chr4 84526197 84526197 1 + A T rs185813917 84526185 + 84526165 84526205 41 AAATGATGGCATCACTGTGGACTGAATGAAATATTTGTATA AAATGATGGCATCACTGTGGACTGAATGAAATTTTTGTATA < 41bp 1 0.345253080562356 1 0.959791362285614 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 GPAT3 ENSG00000138678 UTR3 Human protein_coding chr4:84526185 chr4:84526197 . . 0 hm6A_associated_SNPs_6767 0 0 1 2 84526184 84526205 mRNA hsa-miR-300 AGPAT9 miRanda miRanda
14034 chr4 85569994 85569994 1 + C T rs147423192 85569993 + 85569973 85570013 41 TTACTGTGAATATTTAACAAACACTTACTTGATCTATGTTA TTACTGTGAATATTTAACAAATACTTACTTGATCTATGTTA Direct Loss 1 0.263435889530235 1 0.404473185539246 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 CDS1 ENSG00000163624 UTR3 Human protein_coding chr4:85569993 chr4:85569994 . . 0 hm6A_associated_SNPs_6768 0 0 1 4 85569984 85570005 mRNA hsa-miR-26a CDS1 miRanda miRanda
14034 chr4 85569994 85569994 1 + C T rs147423192 85569993 + 85569973 85570013 41 TTACTGTGAATATTTAACAAACACTTACTTGATCTATGTTA TTACTGTGAATATTTAACAAATACTTACTTGATCTATGTTA Direct Loss 1 0.263435889530235 1 0.404473185539246 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 CDS1 ENSG00000163624 UTR3 Human protein_coding chr4:85569993 chr4:85569994 . . 0 hm6A_associated_SNPs_6768 0 0 1 4 85569985 85570005 mRNA hsa-miR-26b CDS1 miRanda miRanda
14034 chr4 85569994 85569994 1 + C T rs147423192 85569993 + 85569973 85570013 41 TTACTGTGAATATTTAACAAACACTTACTTGATCTATGTTA TTACTGTGAATATTTAACAAATACTTACTTGATCTATGTTA Direct Loss 1 0.263435889530235 1 0.404473185539246 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 CDS1 ENSG00000163624 UTR3 Human protein_coding chr4:85569993 chr4:85569994 . . 0 hm6A_associated_SNPs_6768 0 0 1 4 85569992 85570012 mRNA hsa-miR-376c CDS1 miRanda miRanda
14034 chr4 85569994 85569994 1 + C T rs147423192 85569993 + 85569973 85570013 41 TTACTGTGAATATTTAACAAACACTTACTTGATCTATGTTA TTACTGTGAATATTTAACAAATACTTACTTGATCTATGTTA Direct Loss 1 0.263435889530235 1 0.404473185539246 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 CDS1 ENSG00000163624 UTR3 Human protein_coding chr4:85569993 chr4:85569994 . . 0 hm6A_associated_SNPs_6768 0 0 1 4 85569989 85570005 mRNA hsa-miR-1297 CDS1 miRanda miRanda
14034 chr4 87736101 87736101 1 + C T rs568088613 87736110 + 87736090 87736130 41 CAGTATTTAAGCTTTAAATGACAGTAATATTGGCATAGAAA CAGTATTTAAGTTTTAAATGACAGTAATATTGGCATAGAAA < 41bp 1 0.213035296319856 1 0.0473440289497375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 PTPN13 ENSG00000163629 UTR3 Human protein_coding chr4:87736110 chr4:87736101 . . 0 hm6A_associated_SNPs_6778 0 0 1 6 87736083 87736103 mRNA hsa-miR-21 PTPN13 miRanda miRanda
14034 chr4 87736101 87736101 1 + C T rs568088613 87736110 + 87736090 87736130 41 CAGTATTTAAGCTTTAAATGACAGTAATATTGGCATAGAAA CAGTATTTAAGTTTTAAATGACAGTAATATTGGCATAGAAA < 41bp 1 0.213035296319856 1 0.0473440289497375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 PTPN13 ENSG00000163629 UTR3 Human protein_coding chr4:87736110 chr4:87736101 . . 0 hm6A_associated_SNPs_6778 0 0 1 6 87736084 87736105 mRNA hsa-miR-320a PTPN13 miRanda miRanda
14034 chr4 87736101 87736101 1 + C T rs568088613 87736110 + 87736090 87736130 41 CAGTATTTAAGCTTTAAATGACAGTAATATTGGCATAGAAA CAGTATTTAAGTTTTAAATGACAGTAATATTGGCATAGAAA < 41bp 1 0.213035296319856 1 0.0473440289497375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 PTPN13 ENSG00000163629 UTR3 Human protein_coding chr4:87736110 chr4:87736101 . . 0 hm6A_associated_SNPs_6778 0 0 1 6 87736082 87736103 mRNA hsa-miR-590-5p PTPN13 miRanda miRanda
14034 chr4 87736101 87736101 1 + C T rs568088613 87736110 + 87736090 87736130 41 CAGTATTTAAGCTTTAAATGACAGTAATATTGGCATAGAAA CAGTATTTAAGTTTTAAATGACAGTAATATTGGCATAGAAA < 41bp 1 0.213035296319856 1 0.0473440289497375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 PTPN13 ENSG00000163629 UTR3 Human protein_coding chr4:87736110 chr4:87736101 . . 0 hm6A_associated_SNPs_6778 0 0 1 6 87736084 87736105 mRNA hsa-miR-320b PTPN13 miRanda miRanda
14034 chr4 87736101 87736101 1 + C T rs568088613 87736110 + 87736090 87736130 41 CAGTATTTAAGCTTTAAATGACAGTAATATTGGCATAGAAA CAGTATTTAAGTTTTAAATGACAGTAATATTGGCATAGAAA < 41bp 1 0.213035296319856 1 0.0473440289497375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 PTPN13 ENSG00000163629 UTR3 Human protein_coding chr4:87736110 chr4:87736101 . . 0 hm6A_associated_SNPs_6778 0 0 1 6 87736086 87736105 mRNA hsa-miR-320c PTPN13 miRanda miRanda
14034 chr4 87736101 87736101 1 + C T rs568088613 87736110 + 87736090 87736130 41 CAGTATTTAAGCTTTAAATGACAGTAATATTGGCATAGAAA CAGTATTTAAGTTTTAAATGACAGTAATATTGGCATAGAAA < 41bp 1 0.213035296319856 1 0.0473440289497375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 PTPN13 ENSG00000163629 UTR3 Human protein_coding chr4:87736110 chr4:87736101 . . 0 hm6A_associated_SNPs_6778 0 0 1 6 87736087 87736105 mRNA hsa-miR-320d PTPN13 miRanda miRanda
14034 chr4 88057383 88057383 1 + A C rs3733375 88057377 + 88057357 88057397 41 CTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTC CTTCTAATGGCCATCTGTAAACCATACGTAATGAAGGACTC < 41bp 1 0.469011128441587 1 0.927183032035828 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 AFF1 ENSG00000172493 UTR3 Human protein_coding chr4:88057377 chr4:88057383 . . 0 hm6A_associated_SNPs_6784 0 0 1 1 88057373 88057394 mRNA hsa-miR-205 AFF1 miRanda miRanda
14034 chr4 88062114 88062114 1 + A G rs145339105 88062096 + 88062076 88062116 41 GAGGATTAATTGCTGTTTAAACAAAAATGTAATTGTTCATC GAGGATTAATTGCTGTTTAAACAAAAATGTAATTGTTCGTC < 41bp 1 0.291476470338604 1 0.870839357376099 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AFF1 ENSG00000172493 UTR3 Human protein_coding chr4:88062096 chr4:88062114 . . 0 hm6A_associated_SNPs_6787 0 0 0 1 88062108 88062129 mRNA hsa-miR-186 AFF1 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358065 89358088 mRNA hsa-miR-15a HERC6 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358066 89358088 mRNA hsa-miR-16 HERC6 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358065 89358087 mRNA hsa-miR-103 HERC6 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358065 89358087 mRNA hsa-miR-107 HERC6 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358065 89358088 mRNA hsa-miR-15b HERC6 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358067 89358088 mRNA hsa-miR-195 HERC6 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358069 89358088 mRNA hsa-miR-424 HERC6 miRanda miRanda
14034 chr4 89358080 89358080 1 + A C rs77703113 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGCTGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.570445717895505 1 0.0430623888969421 experiment 0.859108564208989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358080 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_6796 0 0 0 8 89358066 89358088 mRNA hsa-miR-497 HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358065 89358088 mRNA hsa-miR-15a HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358066 89358088 mRNA hsa-miR-16 HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358065 89358087 mRNA hsa-miR-103 HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358065 89358087 mRNA hsa-miR-107 HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358065 89358088 mRNA hsa-miR-15b HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358067 89358088 mRNA hsa-miR-195 HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358069 89358088 mRNA hsa-miR-424 HERC6 miRanda miRanda
14034 chr4 89358083 89358083 1 + C A rs143485545 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGATGATGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.529494987800277 1 0.0371655225753784 experiment 0.941010024399446 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358083 nonsynonymous SNV 0.035 0 hm6A_associated_SNPs_6797 0 0 0 8 89358066 89358088 mRNA hsa-miR-497 HERC6 miRanda miRanda
14034 chr4 95587259 95587259 1 + A C rs11550270 95587249 + 95587229 95587269 41 AAGGTGATTTTATAGTCGAGACAGAGCCCTAGGTCCTTCCT AAGGTGATTTTATAGTCGAGACAGAGCCCTCGGTCCTTCCT < 41bp 1 0.149604931215451 1 0.0518159866333008 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 31 PDLIM5 ENSG00000163110 UTR3 Human protein_coding chr4:95587249 chr4:95587259 . . 0 hm6A_associated_SNPs_6803 0 0 1 1 95587246 95587269 mRNA hsa-miR-7 PDLIM5 miRanda miRanda
14034 chr4 99983636 99983636 1 + A G rs115916853 99983634 + 99983614 99983654 41 TAGGAGTGTATCCAGTGAAGACATATCAAATCACAAAGTCA TAGGAGTGTATCCAGTGAAGACGTATCAAATCACAAAGTCA Direct Loss 1 0.295963869688482 1 0.419956535100937 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 METAP1 ENSG00000164024 UTR3 Human protein_coding chr4:99983634 chr4:99983636 . . 0 hm6A_associated_SNPs_6804 0 0 1 2 99983614 99983641 mRNA hsa-miR-190 METAP1 miRanda miRanda
14034 chr4 99983636 99983636 1 + A G rs115916853 99983634 + 99983614 99983654 41 TAGGAGTGTATCCAGTGAAGACATATCAAATCACAAAGTCA TAGGAGTGTATCCAGTGAAGACGTATCAAATCACAAAGTCA Direct Loss 1 0.295963869688482 1 0.419956535100937 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 METAP1 ENSG00000164024 UTR3 Human protein_coding chr4:99983634 chr4:99983636 . . 0 hm6A_associated_SNPs_6804 0 0 1 2 99983622 99983641 mRNA hsa-miR-190b METAP1 miRanda miRanda
14034 chr4 100789416 100789416 1 + G A rs4699768 100789429 + 100789409 100789449 41 GCAGCAGGCTTCAAATGAAAACCGACTAAGGATTTTCTTTC GCAGCAGACTTCAAATGAAAACCGACTAAGGATTTTCTTTC < 41bp 1 0.0646000026877187 1 0.711856544017792 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 DAPP1 ENSG00000070190 UTR3 Human protein_coding chr4:100789429 chr4:100789416 . . 0 hm6A_associated_SNPs_6805 0 0 1 1 100789395 100789417 mRNA hsa-miR-370 DAPP1 miRanda miRanda
14034 chr4 100789498 100789498 1 + C T rs183386949 100789481 + 100789461 100789501 41 AGAAGCAGATGCTGATTGGGACCCATATACCACGTTGCTGA AGAAGCAGATGCTGATTGGGACCCATATACCACGTTGTTGA < 41bp 1 0.172088996961103 1 0.894406676292419 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 DAPP1 ENSG00000070190 UTR3 Human protein_coding chr4:100789481 chr4:100789498 . . 0 hm6A_associated_SNPs_6807 0 0 0 3 100789480 100789504 mRNA hsa-miR-16 DAPP1 miRanda miRanda
14034 chr4 100789498 100789498 1 + C T rs183386949 100789481 + 100789461 100789501 41 AGAAGCAGATGCTGATTGGGACCCATATACCACGTTGCTGA AGAAGCAGATGCTGATTGGGACCCATATACCACGTTGTTGA < 41bp 1 0.172088996961103 1 0.894406676292419 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 DAPP1 ENSG00000070190 UTR3 Human protein_coding chr4:100789481 chr4:100789498 . . 0 hm6A_associated_SNPs_6807 0 0 0 3 100789484 100789504 mRNA hsa-miR-15b DAPP1 miRanda miRanda
14034 chr4 100789498 100789498 1 + C T rs183386949 100789481 + 100789461 100789501 41 AGAAGCAGATGCTGATTGGGACCCATATACCACGTTGCTGA AGAAGCAGATGCTGATTGGGACCCATATACCACGTTGTTGA < 41bp 1 0.172088996961103 1 0.894406676292419 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 DAPP1 ENSG00000070190 UTR3 Human protein_coding chr4:100789481 chr4:100789498 . . 0 hm6A_associated_SNPs_6807 0 0 0 3 100789485 100789504 mRNA hsa-miR-497 DAPP1 miRanda miRanda
14034 chr4 103537774 103537774 1 + G A rs4648143 103537759 + 103537739 103537779 41 AGGCAAAATTTAGCCTGCTGACAATTTCCCACACCGTGTAA AGGCAAAATTTAGCCTGCTGACAATTTCCCACACCATGTAA < 41bp 1 0.787376055774317 1 0.655785799026489 experiment 0.425247888451366 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 NFKB1 ENSG00000109320 UTR3 Human protein_coding chr4:103537759 chr4:103537774 . . 0 hm6A_associated_SNPs_6809 0 0 1 1 103537765 103537787 mRNA hsa-miR-9 NFKB1 miRanda miRanda
14034 chr4 106155185 106155185 1 + C G rs12498609 106155183 + 106155163 106155203 41 CCTCCCATTTGCCAGACAGAACCTCTGGCTACAAAGCTCCA CCTCCCATTTGCCAGACAGAACGTCTGGCTACAAAGCTCCA Direct Loss 1 0.693265917246569 1 0.420673906803131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 TET2 ENSG00000168769 CDS Human protein_coding chr4:106155183 chr4:106155185 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_6811 1 0 0 2 106155183 106155205 mRNA hsa-miR-378 TET2 miRanda miRanda
14034 chr4 106155185 106155185 1 + C G rs12498609 106155183 + 106155163 106155203 41 CCTCCCATTTGCCAGACAGAACCTCTGGCTACAAAGCTCCA CCTCCCATTTGCCAGACAGAACGTCTGGCTACAAAGCTCCA Direct Loss 1 0.693265917246569 1 0.420673906803131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 TET2 ENSG00000168769 CDS Human protein_coding chr4:106155183 chr4:106155185 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_6811 1 0 0 2 106155182 106155205 mRNA hsa-miR-422a TET2 miRanda miRanda
14034 chr4 106155199 106155199 1 + C T rs111948941 106155183 + 106155163 106155203 41 CCTCCCATTTGCCAGACAGAACCTCTGGCTACAAAGCTCCA CCTCCCATTTGCCAGACAGAACCTCTGGCTACAAAGTTCCA < 41bp 1 0.538315994853956 1 0.484585970640182 experiment 0.923368010292088 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TET2 ENSG00000168769 CDS Human protein_coding chr4:106155183 chr4:106155199 nonsynonymous SNV 0.979 1 hm6A_associated_SNPs_6812 1 0 0 2 106155183 106155205 mRNA hsa-miR-378 TET2 miRanda miRanda
14034 chr4 106155199 106155199 1 + C T rs111948941 106155183 + 106155163 106155203 41 CCTCCCATTTGCCAGACAGAACCTCTGGCTACAAAGCTCCA CCTCCCATTTGCCAGACAGAACCTCTGGCTACAAAGTTCCA < 41bp 1 0.538315994853956 1 0.484585970640182 experiment 0.923368010292088 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TET2 ENSG00000168769 CDS Human protein_coding chr4:106155183 chr4:106155199 nonsynonymous SNV 0.979 1 hm6A_associated_SNPs_6812 1 0 0 2 106155182 106155205 mRNA hsa-miR-422a TET2 miRanda miRanda
14034 chr4 108835337 108835337 1 + G A rs147485413 108835338 + 108835318 108835358 41 TCTATTAAGAAGTGCTCTTGACTTCAACACCCAAACACTGA TCTATTAAGAAGTGCTCTTAACTTCAACACCCAAACACTGA < 41bp 1 0.134406418858057 1 0.48904824256897 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 LOC101929595 ENSG00000245293 ncRNA_intronic Human antisense chr4:108835338 chr4:108835337 . . 0 hm6A_associated_SNPs_6820 0 0 1 2 108835310 108835338 mRNA hsa-miR-335 SGMS2 miRanda miRanda
14034 chr4 108835337 108835337 1 + G A rs147485413 108835338 + 108835318 108835358 41 TCTATTAAGAAGTGCTCTTGACTTCAACACCCAAACACTGA TCTATTAAGAAGTGCTCTTAACTTCAACACCCAAACACTGA < 41bp 1 0.134406418858057 1 0.48904824256897 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 LOC101929595 ENSG00000245293 ncRNA_intronic Human antisense chr4:108835338 chr4:108835337 . . 0 hm6A_associated_SNPs_6820 0 0 1 2 108835318 108835337 mRNA hsa-miR-506 SGMS2 miRanda miRanda
14034 chr4 110461261 110461261 1 + T C rs35440731 110461275 + 110461255 110461295 41 TTTATATGAATTACTTTTTAACAAGGAATGTTTCTTATTCA TTTATACGAATTACTTTTTAACAAGGAATGTTTCTTATTCA < 41bp 1 0.314442202915839 1 0.720412135124207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 SEC24B ENSG00000138802 UTR3 Human protein_coding chr4:110461275 chr4:110461261 . . 0 hm6A_associated_SNPs_6821 0 0 1 4 110461243 110461264 mRNA hsa-miR-376a SEC24B miRanda miRanda
14034 chr4 110461261 110461261 1 + T C rs35440731 110461275 + 110461255 110461295 41 TTTATATGAATTACTTTTTAACAAGGAATGTTTCTTATTCA TTTATACGAATTACTTTTTAACAAGGAATGTTTCTTATTCA < 41bp 1 0.314442202915839 1 0.720412135124207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 SEC24B ENSG00000138802 UTR3 Human protein_coding chr4:110461275 chr4:110461261 . . 0 hm6A_associated_SNPs_6821 0 0 1 4 110461240 110461261 mRNA hsa-miR-340 SEC24B miRanda miRanda
14034 chr4 110461261 110461261 1 + T C rs35440731 110461275 + 110461255 110461295 41 TTTATATGAATTACTTTTTAACAAGGAATGTTTCTTATTCA TTTATACGAATTACTTTTTAACAAGGAATGTTTCTTATTCA < 41bp 1 0.314442202915839 1 0.720412135124207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 SEC24B ENSG00000138802 UTR3 Human protein_coding chr4:110461275 chr4:110461261 . . 0 hm6A_associated_SNPs_6821 0 0 1 4 110461243 110461262 mRNA hsa-miR-410 SEC24B miRanda miRanda
14034 chr4 110461261 110461261 1 + T C rs35440731 110461275 + 110461255 110461295 41 TTTATATGAATTACTTTTTAACAAGGAATGTTTCTTATTCA TTTATACGAATTACTTTTTAACAAGGAATGTTTCTTATTCA < 41bp 1 0.314442202915839 1 0.720412135124207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 SEC24B ENSG00000138802 UTR3 Human protein_coding chr4:110461275 chr4:110461261 . . 0 hm6A_associated_SNPs_6821 0 0 1 4 110461242 110461264 mRNA hsa-miR-376b SEC24B miRanda miRanda
14034 chr4 113190410 113190410 1 + A C rs188510949 113190397 + 113190377 113190417 41 GATGTTAGATTTTACACAGAACATATTCTCTGCATGATTTC GATGTTAGATTTTACACAGAACATATTCTCTGCCTGATTTC < 41bp 1 0.128748167125681 1 0.238795608282089 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 AP1AR ENSG00000138660 UTR3 Human protein_coding chr4:113190397 chr4:113190410 . . 0 hm6A_associated_SNPs_6827 0 0 1 1 113190397 113190418 mRNA hsa-miR-494 AP1AR miRanda miRanda
14034 chr4 113578609 113578609 1 + C T rs1129065 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTTAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.219838532139563 1 0.109849095344543 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578609 . . 0 hm6A_associated_SNPs_6837 0 0 1 5 113578598 113578619 mRNA hsa-miR-381 LARP7 miRanda miRanda
14034 chr4 113578609 113578609 1 + C T rs1129065 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTTAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.219838532139563 1 0.109849095344543 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578609 . . 0 hm6A_associated_SNPs_6837 0 0 1 5 113578594 113578615 mRNA hsa-miR-382 LARP7 miRanda miRanda
14034 chr4 113578609 113578609 1 + C T rs1129065 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTTAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.219838532139563 1 0.109849095344543 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578609 . . 0 hm6A_associated_SNPs_6837 0 0 1 5 113578607 113578627 mRNA hsa-miR-590-5p LARP7 miRanda miRanda
14034 chr4 113578609 113578609 1 + C T rs1129065 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTTAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.219838532139563 1 0.109849095344543 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578609 . . 0 hm6A_associated_SNPs_6837 0 0 1 5 113578598 113578619 mRNA hsa-miR-300 LARP7 miRanda miRanda
14034 chr4 113578609 113578609 1 + C T rs1129065 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTTAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.219838532139563 1 0.109849095344543 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578609 . . 0 hm6A_associated_SNPs_6837 0 0 1 5 113578590 113578610 mRNA hsa-miR-873 LARP7 miRanda miRanda
14034 chr4 113578612 113578612 1 + C T rs115594791 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTCAATTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.19592542587262 1 0.107463032007217 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578612 . . 0 hm6A_associated_SNPs_6838 0 0 1 4 113578598 113578619 mRNA hsa-miR-381 LARP7 miRanda miRanda
14034 chr4 113578612 113578612 1 + C T rs115594791 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTCAATTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.19592542587262 1 0.107463032007217 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578612 . . 0 hm6A_associated_SNPs_6838 0 0 1 4 113578594 113578615 mRNA hsa-miR-382 LARP7 miRanda miRanda
14034 chr4 113578612 113578612 1 + C T rs115594791 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTCAATTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.19592542587262 1 0.107463032007217 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578612 . . 0 hm6A_associated_SNPs_6838 0 0 1 4 113578607 113578627 mRNA hsa-miR-590-5p LARP7 miRanda miRanda
14034 chr4 113578612 113578612 1 + C T rs115594791 113578624 + 113578604 113578644 41 TTCCTCAACTTGTAAATAAGACTTTTTTCTAGAGACAAATA TTCCTCAATTTGTAAATAAGACTTTTTTCTAGAGACAAATA < 41bp 1 0.19592542587262 1 0.107463032007217 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 LARP7 ENSG00000174720 UTR3 Human protein_coding chr4:113578624 chr4:113578612 . . 0 hm6A_associated_SNPs_6838 0 0 1 4 113578598 113578619 mRNA hsa-miR-300 LARP7 miRanda miRanda
14034 chr4 114303709 114303709 1 + T C rs550075007 114303726 + 114303706 114303746 41 CTGTAGATAATTCATTGGAAACAAGATTTACCCACTACATA CTGCAGATAATTCATTGGAAACAAGATTTACCCACTACATA < 41bp 1 0.0377908714108005 1 0.0757157802581787 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 ANK2 ENSG00000145362 UTR3 Human protein_coding chr4:114303726 chr4:114303709 . . 0 hm6A_associated_SNPs_6841 0 0 0 4 114303686 114303709 mRNA hsa-miR-148a ANK2 miRanda miRanda
14034 chr4 114303709 114303709 1 + T C rs550075007 114303726 + 114303706 114303746 41 CTGTAGATAATTCATTGGAAACAAGATTTACCCACTACATA CTGCAGATAATTCATTGGAAACAAGATTTACCCACTACATA < 41bp 1 0.0377908714108005 1 0.0757157802581787 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 ANK2 ENSG00000145362 UTR3 Human protein_coding chr4:114303726 chr4:114303709 . . 0 hm6A_associated_SNPs_6841 0 0 0 4 114303692 114303712 mRNA hsa-miR-139-5p ANK2 miRanda miRanda
14034 chr4 114303709 114303709 1 + T C rs550075007 114303726 + 114303706 114303746 41 CTGTAGATAATTCATTGGAAACAAGATTTACCCACTACATA CTGCAGATAATTCATTGGAAACAAGATTTACCCACTACATA < 41bp 1 0.0377908714108005 1 0.0757157802581787 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 ANK2 ENSG00000145362 UTR3 Human protein_coding chr4:114303726 chr4:114303709 . . 0 hm6A_associated_SNPs_6841 0 0 0 4 114303687 114303709 mRNA hsa-miR-152 ANK2 miRanda miRanda
14034 chr4 114303709 114303709 1 + T C rs550075007 114303726 + 114303706 114303746 41 CTGTAGATAATTCATTGGAAACAAGATTTACCCACTACATA CTGCAGATAATTCATTGGAAACAAGATTTACCCACTACATA < 41bp 1 0.0377908714108005 1 0.0757157802581787 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 ANK2 ENSG00000145362 UTR3 Human protein_coding chr4:114303726 chr4:114303709 . . 0 hm6A_associated_SNPs_6841 0 0 0 4 114303686 114303709 mRNA hsa-miR-148b ANK2 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631542 119631562 mRNA hsa-miR-17 METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631542 119631562 mRNA hsa-miR-20a METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631542 119631562 mRNA hsa-miR-93 METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631542 119631562 mRNA hsa-miR-106a METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631540 119631560 mRNA hsa-miR-130a METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631536 119631560 mRNA hsa-miR-301a METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631540 119631560 mRNA hsa-miR-130b METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631542 119631562 mRNA hsa-miR-20b METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631541 119631562 mRNA hsa-miR-519d METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631538 119631560 mRNA hsa-miR-454 METTL14 miRanda miRanda
14034 chr4 119631542 119631542 1 + T C rs536459723 119631540 + 119631520 119631560 41 GTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTT GTGGGAGACTTAACTTTAGAACCCACTTCCAGCTTGCACTT < 41bp 1 0.369066170237292 1 0.634987592697144 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 23 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631540 chr4:119631542 . . 0 hm6A_associated_SNPs_6852 0 0 1 11 119631536 119631560 mRNA hsa-miR-301b METTL14 miRanda miRanda
14034 chr4 119631992 119631992 1 + A T rs1064034 119631979 + 119631959 119631999 41 AATACTGAAGAAATTAAGAGACTTTGAACAAAAACTCTTCC AATACTGAAGAAATTAAGAGACTTTGAACAAAATCTCTTCC < 41bp 1 0.486026227792397 1 0.860234260559082 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 METTL14 ENSG00000145388 UTR3 Human protein_coding chr4:119631979 chr4:119631992 . . 0 hm6A_associated_SNPs_6854 0 0 1 1 119631983 119632000 mRNA hsa-miR-7 METTL14 miRanda miRanda
14034 chr4 122738036 122738036 1 + T C rs143489679 122738040 + 122738020 122738060 41 GTTGTATATCTGTATATATAACTATTAAAAGGGATATTTAT GTTGTATATCTGTATACATAACTATTAAAAGGGATATTTAT < 41bp 1 0.384543937210348 1 0.687839329242706 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 CCNA2;EXOSC9 ENSG00000123737;ENSG00000145386 UTR3 Human other chr4:122738040 chr4:122738036 . . 0 hm6A_associated_SNPs_6862 0 0 1 2 122738033 122738054 mRNA hsa-miR-204 EXOSC9 miRanda miRanda
14034 chr4 122738036 122738036 1 + T C rs143489679 122738040 + 122738020 122738060 41 GTTGTATATCTGTATATATAACTATTAAAAGGGATATTTAT GTTGTATATCTGTATACATAACTATTAAAAGGGATATTTAT < 41bp 1 0.384543937210348 1 0.687839329242706 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 CCNA2;EXOSC9 ENSG00000123737;ENSG00000145386 UTR3 Human other chr4:122738040 chr4:122738036 . . 0 hm6A_associated_SNPs_6862 0 0 1 2 122738034 122738054 mRNA hsa-miR-211 EXOSC9 miRanda miRanda
14034 chr4 122738132 122738132 1 - T C rs3217779 122738139 - 122738119 122738159 41 TATTTTAAAGCACATTAAAAACAAAAAACTATTTTTAAAAT TATTTTAAAGCACATTAAAAACAAAAAGCTATTTTTAAAAT < 41bp 1 0.505099463943017 1 0.0208920538425446 experiment 0.989801072113966 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 CCNA2;EXOSC9 ENSG00000123737;ENSG00000145386 UTR3 Human other chr4:122738139 chr4:122738132 . . 0 hm6A_associated_SNPs_6864 0 0 1 2 122738132 122738152 mRNA hsa-miR-129-5p CCNA2 miRanda miRanda
14034 chr4 122738132 122738132 1 - T C rs3217779 122738139 - 122738119 122738159 41 TATTTTAAAGCACATTAAAAACAAAAAACTATTTTTAAAAT TATTTTAAAGCACATTAAAAACAAAAAGCTATTTTTAAAAT < 41bp 1 0.505099463943017 1 0.0208920538425446 experiment 0.989801072113966 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 CCNA2;EXOSC9 ENSG00000123737;ENSG00000145386 UTR3 Human other chr4:122738139 chr4:122738132 . . 0 hm6A_associated_SNPs_6864 0 0 1 2 122738111 122738132 mRNA hsa-miR-214 CCNA2 miRanda miRanda
14034 chr4 128627938 128627938 1 + G A rs548278763 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAGAAGAACACTTTTTGGTGACTATTCCTTAAAGACACGCA < 41bp 1 0.622614638042323 1 0.921024024486542 experiment 0.754770723915353 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627938 synonymous SNV . 0 hm6A_associated_SNPs_6876 0 0 1 1 128627932 128627957 mRNA hsa-miR-206 INTU miRanda miRanda
14034 chr4 128627967 128627967 1 + G A rs78533412 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACACA < 41bp 1 0.620740190104986 1 0.921847820281982 experiment 0.758519619790028 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627967 nonsynonymous SNV 0.009 1 hm6A_associated_SNPs_6877 0 0 1 2 128627962 128627984 mRNA hsa-miR-7 INTU miRanda miRanda
14034 chr4 128627967 128627967 1 + G A rs78533412 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACACA < 41bp 1 0.620740190104986 1 0.921847820281982 experiment 0.758519619790028 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627967 nonsynonymous SNV 0.009 1 hm6A_associated_SNPs_6877 0 0 1 2 128627947 128627968 mRNA hsa-miR-187 INTU miRanda miRanda
14034 chr4 128627967 128627967 1 + G A rs78533412 128627963 + 128627943 128627983 41 TTGGTGACTATTCCTTAAAGACACGCAAGCCTAGTCCTTCC TTGGTGACTATTCCTTAAAGACACACAAGCCTAGTCCTTCC < 41bp 1 0.795507751262237 1 0.871247172355652 experiment 0.408984497475527 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 INTU ENSG00000164066 CDS Human protein_coding chr4:128627963 chr4:128627967 nonsynonymous SNV 0.009 1 hm6A_associated_SNPs_6878 0 0 1 2 128627962 128627984 mRNA hsa-miR-7 INTU miRanda miRanda
14034 chr4 128627967 128627967 1 + G A rs78533412 128627963 + 128627943 128627983 41 TTGGTGACTATTCCTTAAAGACACGCAAGCCTAGTCCTTCC TTGGTGACTATTCCTTAAAGACACACAAGCCTAGTCCTTCC < 41bp 1 0.795507751262237 1 0.871247172355652 experiment 0.408984497475527 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 INTU ENSG00000164066 CDS Human protein_coding chr4:128627963 chr4:128627967 nonsynonymous SNV 0.009 1 hm6A_associated_SNPs_6878 0 0 1 2 128627947 128627968 mRNA hsa-miR-187 INTU miRanda miRanda
14034 chr4 128754230 128754230 1 + T G rs529630583 128754242 + 128754222 128754262 41 AGCCGAATTAGATTTACAAGACAATCTAAGCTTTCCGGATA AGCCGAATGAGATTTACAAGACAATCTAAGCTTTCCGGATA < 41bp 1 0.63191267846503 1 0.596688330173492 experiment 0.73617464306994 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 HSPA4L ENSG00000164070 UTR3 Human protein_coding chr4:128754242 chr4:128754230 . . 0 hm6A_associated_SNPs_6881 0 0 1 3 128754225 128754248 mRNA hsa-miR-219-5p HSPA4L miRanda miRanda
14034 chr4 128754230 128754230 1 + T G rs529630583 128754242 + 128754222 128754262 41 AGCCGAATTAGATTTACAAGACAATCTAAGCTTTCCGGATA AGCCGAATGAGATTTACAAGACAATCTAAGCTTTCCGGATA < 41bp 1 0.63191267846503 1 0.596688330173492 experiment 0.73617464306994 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 HSPA4L ENSG00000164070 UTR3 Human protein_coding chr4:128754242 chr4:128754230 . . 0 hm6A_associated_SNPs_6881 0 0 1 3 128754224 128754244 mRNA hsa-miR-431 HSPA4L miRanda miRanda
14034 chr4 128754230 128754230 1 + T G rs529630583 128754242 + 128754222 128754262 41 AGCCGAATTAGATTTACAAGACAATCTAAGCTTTCCGGATA AGCCGAATGAGATTTACAAGACAATCTAAGCTTTCCGGATA < 41bp 1 0.63191267846503 1 0.596688330173492 experiment 0.73617464306994 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 HSPA4L ENSG00000164070 UTR3 Human protein_coding chr4:128754242 chr4:128754230 . . 0 hm6A_associated_SNPs_6881 0 0 1 3 128754228 128754249 mRNA hsa-miR-876-5p HSPA4L miRanda miRanda
14034 chr4 128754258 128754258 1 + G A rs557418743 128754242 + 128754222 128754262 41 AGCCGAATTAGATTTACAAGACAATCTAAGCTTTCCGGATA AGCCGAATTAGATTTACAAGACAATCTAAGCTTTCCAGATA < 41bp 1 0.617116192632601 1 0.281987696886063 experiment 0.765767614734799 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 HSPA4L ENSG00000164070 UTR3 Human protein_coding chr4:128754242 chr4:128754258 . . 0 hm6A_associated_SNPs_6882 0 0 1 2 128754246 128754271 mRNA hsa-miR-340 HSPA4L miRanda miRanda
14034 chr4 128754258 128754258 1 + G A rs557418743 128754242 + 128754222 128754262 41 AGCCGAATTAGATTTACAAGACAATCTAAGCTTTCCGGATA AGCCGAATTAGATTTACAAGACAATCTAAGCTTTCCAGATA < 41bp 1 0.617116192632601 1 0.281987696886063 experiment 0.765767614734799 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 HSPA4L ENSG00000164070 UTR3 Human protein_coding chr4:128754242 chr4:128754258 . . 0 hm6A_associated_SNPs_6882 0 0 1 2 128754252 128754272 mRNA hsa-miR-410 HSPA4L miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029102 + 129029082 129029122 41 AATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATA AATATGCAGTGGAATAGGTGACTCACTGAAATACCTTTATA < 41bp 1 0.362516080969472 1 0.825144410133362 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029102 chr4:129029114 . . 0 hm6A_associated_SNPs_6888 0 0 1 5 129029099 129029119 mRNA hsa-miR-124 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029102 + 129029082 129029122 41 AATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATA AATATGCAGTGGAATAGGTGACTCACTGAAATACCTTTATA < 41bp 1 0.362516080969472 1 0.825144410133362 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029102 chr4:129029114 . . 0 hm6A_associated_SNPs_6888 0 0 1 5 129029112 129029131 mRNA hsa-miR-144 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029102 + 129029082 129029122 41 AATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATA AATATGCAGTGGAATAGGTGACTCACTGAAATACCTTTATA < 41bp 1 0.362516080969472 1 0.825144410133362 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029102 chr4:129029114 . . 0 hm6A_associated_SNPs_6888 0 0 1 5 129029110 129029132 mRNA hsa-miR-145 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029102 + 129029082 129029122 41 AATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATA AATATGCAGTGGAATAGGTGACTCACTGAAATACCTTTATA < 41bp 1 0.362516080969472 1 0.825144410133362 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029102 chr4:129029114 . . 0 hm6A_associated_SNPs_6888 0 0 1 5 129029102 129029123 mRNA hsa-miR-340 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029102 + 129029082 129029122 41 AATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATA AATATGCAGTGGAATAGGTGACTCACTGAAATACCTTTATA < 41bp 1 0.362516080969472 1 0.825144410133362 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029102 chr4:129029114 . . 0 hm6A_associated_SNPs_6888 0 0 1 5 129029099 129029119 mRNA hsa-miR-506 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029132 + 129029112 129029152 41 ATGCCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG ATACCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG < 41bp 1 0.511085688902351 1 0.934613585472107 experiment 0.977828622195297 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029132 chr4:129029114 . . 0 hm6A_associated_SNPs_6889 0 0 1 5 129029099 129029119 mRNA hsa-miR-124 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029132 + 129029112 129029152 41 ATGCCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG ATACCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG < 41bp 1 0.511085688902351 1 0.934613585472107 experiment 0.977828622195297 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029132 chr4:129029114 . . 0 hm6A_associated_SNPs_6889 0 0 1 5 129029112 129029131 mRNA hsa-miR-144 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029132 + 129029112 129029152 41 ATGCCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG ATACCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG < 41bp 1 0.511085688902351 1 0.934613585472107 experiment 0.977828622195297 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029132 chr4:129029114 . . 0 hm6A_associated_SNPs_6889 0 0 1 5 129029110 129029132 mRNA hsa-miR-145 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029132 + 129029112 129029152 41 ATGCCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG ATACCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG < 41bp 1 0.511085688902351 1 0.934613585472107 experiment 0.977828622195297 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029132 chr4:129029114 . . 0 hm6A_associated_SNPs_6889 0 0 1 5 129029102 129029123 mRNA hsa-miR-340 LARP1B miRanda miRanda
14034 chr4 129029114 129029114 1 + G A rs141986787 129029132 + 129029112 129029152 41 ATGCCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG ATACCTTTATAAATACTGGAACAAATCCTGCTGCAAAAATG < 41bp 1 0.511085688902351 1 0.934613585472107 experiment 0.977828622195297 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029132 chr4:129029114 . . 0 hm6A_associated_SNPs_6889 0 0 1 5 129029099 129029119 mRNA hsa-miR-506 LARP1B miRanda miRanda
14034 chr4 129783739 129783739 1 + G C rs142085959 129783748 + 129783728 129783768 41 TGACTCAGGATGGTTTACAGACTGATTTAGAAAACCAGAAC TGACTCAGGATCGTTTACAGACTGATTTAGAAAACCAGAAC < 41bp 1 0.700529109871452 1 0.985494136810303 experiment 0.598941780257096 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 JADE1 ENSG00000077684 UTR3 Human protein_coding chr4:129783748 chr4:129783739 . . 0 hm6A_associated_SNPs_6890 0 0 1 4 129783725 129783746 mRNA hsa-miR-30a PHF17 miRanda miRanda
14034 chr4 129783739 129783739 1 + G C rs142085959 129783748 + 129783728 129783768 41 TGACTCAGGATGGTTTACAGACTGATTTAGAAAACCAGAAC TGACTCAGGATCGTTTACAGACTGATTTAGAAAACCAGAAC < 41bp 1 0.700529109871452 1 0.985494136810303 experiment 0.598941780257096 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 JADE1 ENSG00000077684 UTR3 Human protein_coding chr4:129783748 chr4:129783739 . . 0 hm6A_associated_SNPs_6890 0 0 1 4 129783723 129783746 mRNA hsa-miR-30c PHF17 miRanda miRanda
14034 chr4 129783739 129783739 1 + G C rs142085959 129783748 + 129783728 129783768 41 TGACTCAGGATGGTTTACAGACTGATTTAGAAAACCAGAAC TGACTCAGGATCGTTTACAGACTGATTTAGAAAACCAGAAC < 41bp 1 0.700529109871452 1 0.985494136810303 experiment 0.598941780257096 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 JADE1 ENSG00000077684 UTR3 Human protein_coding chr4:129783748 chr4:129783739 . . 0 hm6A_associated_SNPs_6890 0 0 1 4 129783725 129783746 mRNA hsa-miR-30b PHF17 miRanda miRanda
14034 chr4 129783739 129783739 1 + G C rs142085959 129783748 + 129783728 129783768 41 TGACTCAGGATGGTTTACAGACTGATTTAGAAAACCAGAAC TGACTCAGGATCGTTTACAGACTGATTTAGAAAACCAGAAC < 41bp 1 0.700529109871452 1 0.985494136810303 experiment 0.598941780257096 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 JADE1 ENSG00000077684 UTR3 Human protein_coding chr4:129783748 chr4:129783739 . . 0 hm6A_associated_SNPs_6890 0 0 1 4 129783725 129783746 mRNA hsa-miR-30e PHF17 miRanda miRanda
14034 chr4 129795636 129795636 1 + A C rs188168590 129795641 + 129795621 129795661 41 GCTGAACCAAAAAAAACAAAACAAAAACAAAACAAAAAATA GCTGAACCAAAAAAACCAAAACAAAAACAAAACAAAAAATA < 41bp 1 0.142466748064499 1 0.0940157771110535 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 JADE1 ENSG00000077684 UTR3 Human protein_coding chr4:129795641 chr4:129795636 . . 0 hm6A_associated_SNPs_6892 0 0 1 1 129795628 129795648 mRNA hsa-miR-129-5p PHF17 miRanda miRanda
14034 chr4 140309806 140309806 1 + C G rs115992484 140309788 + 140309768 140309808 41 AGATGCTTGATGTTGTAGAAACTGGGACATATAGATACCAA AGATGCTTGATGTTGTAGAAACTGGGACATATAGATACGAA < 41bp 1 0.346524525198075 1 0.904292464256287 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 39 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140309788 chr4:140309806 . . 0 hm6A_associated_SNPs_6900 0 0 1 1 140309797 140309817 mRNA hsa-miR-590-3p NAA15 miRanda miRanda
14034 chr4 140309806 140309806 1 + C G rs115992484 140309794 + 140309774 140309814 41 TTGATGTTGTAGAAACTGGGACATATAGATACCAAGCAAAA TTGATGTTGTAGAAACTGGGACATATAGATACGAAGCAAAA < 41bp 1 0.786232715993404 1 0.927844762802124 experiment 0.427534568013193 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140309794 chr4:140309806 . . 0 hm6A_associated_SNPs_6901 0 0 1 1 140309797 140309817 mRNA hsa-miR-590-3p NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310122 + 140310102 140310142 41 GCTTGAAGTTAAAGAGCAGAACTCCTGACTACCATTCTATG GCTTGAAGTTAAAGAGCAGAACTCCTGACTACCATTCTGTG < 41bp 1 0.493677441903417 1 0.973133206367493 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310122 chr4:140310140 . . 0 hm6A_associated_SNPs_6902 0 0 1 2 140310123 140310144 mRNA hsa-miR-376a NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310122 + 140310102 140310142 41 GCTTGAAGTTAAAGAGCAGAACTCCTGACTACCATTCTATG GCTTGAAGTTAAAGAGCAGAACTCCTGACTACCATTCTGTG < 41bp 1 0.493677441903417 1 0.973133206367493 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310122 chr4:140310140 . . 0 hm6A_associated_SNPs_6902 0 0 1 2 140310122 140310144 mRNA hsa-miR-376b NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310129 + 140310109 140310149 41 GTTAAAGAGCAGAACTCCTGACTACCATTCTATGACTGATC GTTAAAGAGCAGAACTCCTGACTACCATTCTGTGACTGATC < 41bp 1 0.412378127705575 1 0.965434789657593 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310129 chr4:140310140 . . 0 hm6A_associated_SNPs_6903 0 0 1 2 140310123 140310144 mRNA hsa-miR-376a NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310129 + 140310109 140310149 41 GTTAAAGAGCAGAACTCCTGACTACCATTCTATGACTGATC GTTAAAGAGCAGAACTCCTGACTACCATTCTGTGACTGATC < 41bp 1 0.412378127705575 1 0.965434789657593 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310129 chr4:140310140 . . 0 hm6A_associated_SNPs_6903 0 0 1 2 140310122 140310144 mRNA hsa-miR-376b NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310143 + 140310123 140310163 41 CTCCTGACTACCATTCTATGACTGATCAAAAGACTAATAGT CTCCTGACTACCATTCTGTGACTGATCAAAAGACTAATAGT < 41bp 1 0.633900531244808 1 0.968228161334991 experiment 0.732198937510383 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310143 chr4:140310140 . . 0 hm6A_associated_SNPs_6904 0 0 1 2 140310123 140310144 mRNA hsa-miR-376a NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310143 + 140310123 140310163 41 CTCCTGACTACCATTCTATGACTGATCAAAAGACTAATAGT CTCCTGACTACCATTCTGTGACTGATCAAAAGACTAATAGT < 41bp 1 0.633900531244808 1 0.968228161334991 experiment 0.732198937510383 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310143 chr4:140310140 . . 0 hm6A_associated_SNPs_6904 0 0 1 2 140310122 140310144 mRNA hsa-miR-376b NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310155 + 140310135 140310175 41 ATTCTATGACTGATCAAAAGACTAATAGTTAAAAACCTCAG ATTCTGTGACTGATCAAAAGACTAATAGTTAAAAACCTCAG < 41bp 1 0.530799959025179 1 0.97551167011261 experiment 0.938400081949643 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310155 chr4:140310140 . . 0 hm6A_associated_SNPs_6905 0 0 1 2 140310123 140310144 mRNA hsa-miR-376a NAA15 miRanda miRanda
14034 chr4 140310140 140310140 1 + A G rs527618497 140310155 + 140310135 140310175 41 ATTCTATGACTGATCAAAAGACTAATAGTTAAAAACCTCAG ATTCTGTGACTGATCAAAAGACTAATAGTTAAAAACCTCAG < 41bp 1 0.530799959025179 1 0.97551167011261 experiment 0.938400081949643 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 NAA15 ENSG00000164134 UTR3 Human protein_coding chr4:140310155 chr4:140310140 . . 0 hm6A_associated_SNPs_6905 0 0 1 2 140310122 140310144 mRNA hsa-miR-376b NAA15 miRanda miRanda
14034 chr4 140625322 140625322 1 + T A rs544092151 140625302 + 140625282 140625322 41 AAACTGAGGCGGCAATTCTAACTTTTTCTCTTCCCTTTAAT AAACTGAGGCGGCAATTCTAACTTTTTCTCTTCCCTTTAAA < 41bp 1 0.0751492565920422 1 0.778504014015198 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 MGST2 ENSG00000085871 UTR3 Human protein_coding chr4:140625302 chr4:140625322 . . 0 hm6A_associated_SNPs_6908 0 0 1 3 140625303 140625324 mRNA hsa-miR-340 MGST2 miRanda miRanda
14034 chr4 140625322 140625322 1 + T A rs544092151 140625302 + 140625282 140625322 41 AAACTGAGGCGGCAATTCTAACTTTTTCTCTTCCCTTTAAT AAACTGAGGCGGCAATTCTAACTTTTTCTCTTCCCTTTAAA < 41bp 1 0.0751492565920422 1 0.778504014015198 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 MGST2 ENSG00000085871 UTR3 Human protein_coding chr4:140625302 chr4:140625322 . . 0 hm6A_associated_SNPs_6908 0 0 1 3 140625302 140625324 mRNA hsa-miR-340 MGST2 miRanda miRanda
14034 chr4 140625322 140625322 1 + T A rs544092151 140625302 + 140625282 140625322 41 AAACTGAGGCGGCAATTCTAACTTTTTCTCTTCCCTTTAAT AAACTGAGGCGGCAATTCTAACTTTTTCTCTTCCCTTTAAA < 41bp 1 0.0751492565920422 1 0.778504014015198 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 MGST2 ENSG00000085871 UTR3 Human protein_coding chr4:140625302 chr4:140625322 . . 0 hm6A_associated_SNPs_6908 0 0 1 3 140625313 140625333 mRNA hsa-miR-544 MGST2 miRanda miRanda
14034 chr4 144141951 144141951 1 + T A rs10598 144141937 + 144141917 144141957 41 TCTATCTTCAGTTTTACTGAACAAAAAATGTAATTTATTTA TCTATCTTCAGTTTTACTGAACAAAAAATGTAATATATTTA < 41bp 1 0.476779264701145 1 0.893479704856873 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 USP38 ENSG00000170185 UTR3 Human protein_coding chr4:144141937 chr4:144141951 . . 0 hm6A_associated_SNPs_6920 0 0 1 3 144141946 144141967 mRNA hsa-miR-186 USP38 miRanda miRanda
14034 chr4 144141951 144141951 1 + T A rs10598 144141937 + 144141917 144141957 41 TCTATCTTCAGTTTTACTGAACAAAAAATGTAATTTATTTA TCTATCTTCAGTTTTACTGAACAAAAAATGTAATATATTTA < 41bp 1 0.476779264701145 1 0.893479704856873 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 USP38 ENSG00000170185 UTR3 Human protein_coding chr4:144141937 chr4:144141951 . . 0 hm6A_associated_SNPs_6920 0 0 1 3 144141942 144141964 mRNA hsa-miR-155 USP38 miRanda miRanda
14034 chr4 144141951 144141951 1 + T A rs10598 144141937 + 144141917 144141957 41 TCTATCTTCAGTTTTACTGAACAAAAAATGTAATTTATTTA TCTATCTTCAGTTTTACTGAACAAAAAATGTAATATATTTA < 41bp 1 0.476779264701145 1 0.893479704856873 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 USP38 ENSG00000170185 UTR3 Human protein_coding chr4:144141937 chr4:144141951 . . 0 hm6A_associated_SNPs_6920 0 0 1 3 144141949 144141970 mRNA hsa-miR-340 USP38 miRanda miRanda
14034 chr4 146048735 146048735 1 + G C rs4148235 146048726 + 146048706 146048746 41 ACTTTTTCTTGGATGATTAGACTGACTCTGAGAATATTGAT ACTTTTTCTTGGATGATTAGACTGACTCTCAGAATATTGAT < 41bp 1 0.72954615470654 1 0.901618003845215 experiment 0.540907690586919 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 ABCE1 ENSG00000164163 UTR3 Human protein_coding chr4:146048726 chr4:146048735 . . 0 hm6A_associated_SNPs_6927 0 0 1 2 146048729 146048754 mRNA hsa-miR-135a ABCE1 miRanda miRanda
14034 chr4 146048735 146048735 1 + G C rs4148235 146048726 + 146048706 146048746 41 ACTTTTTCTTGGATGATTAGACTGACTCTGAGAATATTGAT ACTTTTTCTTGGATGATTAGACTGACTCTCAGAATATTGAT < 41bp 1 0.72954615470654 1 0.901618003845215 experiment 0.540907690586919 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 ABCE1 ENSG00000164163 UTR3 Human protein_coding chr4:146048726 chr4:146048735 . . 0 hm6A_associated_SNPs_6927 0 0 1 2 146048732 146048754 mRNA hsa-miR-135b ABCE1 miRanda miRanda
14034 chr4 146048735 146048735 1 + G C rs4148235 146048730 + 146048710 146048750 41 TTTCTTGGATGATTAGACTGACTCTGAGAATATTGATAAGC TTTCTTGGATGATTAGACTGACTCTCAGAATATTGATAAGC < 41bp 1 0.713834885358588 1 0.859056353569031 experiment 0.572330229282824 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 26 ABCE1 ENSG00000164163 UTR3 Human protein_coding chr4:146048730 chr4:146048735 . . 0 hm6A_associated_SNPs_6928 0 0 1 2 146048729 146048754 mRNA hsa-miR-135a ABCE1 miRanda miRanda
14034 chr4 146048735 146048735 1 + G C rs4148235 146048730 + 146048710 146048750 41 TTTCTTGGATGATTAGACTGACTCTGAGAATATTGATAAGC TTTCTTGGATGATTAGACTGACTCTCAGAATATTGATAAGC < 41bp 1 0.713834885358588 1 0.859056353569031 experiment 0.572330229282824 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 26 ABCE1 ENSG00000164163 UTR3 Human protein_coding chr4:146048730 chr4:146048735 . . 0 hm6A_associated_SNPs_6928 0 0 1 2 146048732 146048754 mRNA hsa-miR-135b ABCE1 miRanda miRanda
14034 chr4 146049783 146049783 1 + C G rs17019897 146049795 + 146049775 146049815 41 CTTGAGTTCCTGAATTTTGAACAGGATTACCTGGAGCCTGG CTTGAGTTGCTGAATTTTGAACAGGATTACCTGGAGCCTGG < 41bp 1 0.362505247230367 1 0.587287068367004 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 9 ABCE1 ENSG00000164163 UTR3 Human protein_coding chr4:146049795 chr4:146049783 . . 0 hm6A_associated_SNPs_6930 0 0 1 1 146049767 146049787 mRNA hsa-miR-873 ABCE1 miRanda miRanda
14034 chr4 153832227 153832227 1 + T G rs142501451 153832235 + 153832215 153832255 41 TACATAGACAGCTTTTATTGACTTCCATATGTAACAATACC TACATAGACAGCGTTTATTGACTTCCATATGTAACAATACC < 41bp 1 0.19272011686682 1 0.792431950569153 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ARFIP1 ENSG00000164144 UTR3 Human protein_coding chr4:153832235 chr4:153832227 . . 0 hm6A_associated_SNPs_6938 0 0 1 4 153832209 153832230 mRNA hsa-miR-320a ARFIP1 miRanda miRanda
14034 chr4 153832227 153832227 1 + T G rs142501451 153832235 + 153832215 153832255 41 TACATAGACAGCTTTTATTGACTTCCATATGTAACAATACC TACATAGACAGCGTTTATTGACTTCCATATGTAACAATACC < 41bp 1 0.19272011686682 1 0.792431950569153 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ARFIP1 ENSG00000164144 UTR3 Human protein_coding chr4:153832235 chr4:153832227 . . 0 hm6A_associated_SNPs_6938 0 0 1 4 153832209 153832230 mRNA hsa-miR-320b ARFIP1 miRanda miRanda
14034 chr4 153832227 153832227 1 + T G rs142501451 153832235 + 153832215 153832255 41 TACATAGACAGCTTTTATTGACTTCCATATGTAACAATACC TACATAGACAGCGTTTATTGACTTCCATATGTAACAATACC < 41bp 1 0.19272011686682 1 0.792431950569153 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ARFIP1 ENSG00000164144 UTR3 Human protein_coding chr4:153832235 chr4:153832227 . . 0 hm6A_associated_SNPs_6938 0 0 1 4 153832211 153832230 mRNA hsa-miR-320c ARFIP1 miRanda miRanda
14034 chr4 153832227 153832227 1 + T G rs142501451 153832235 + 153832215 153832255 41 TACATAGACAGCTTTTATTGACTTCCATATGTAACAATACC TACATAGACAGCGTTTATTGACTTCCATATGTAACAATACC < 41bp 1 0.19272011686682 1 0.792431950569153 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ARFIP1 ENSG00000164144 UTR3 Human protein_coding chr4:153832235 chr4:153832227 . . 0 hm6A_associated_SNPs_6938 0 0 1 4 153832212 153832230 mRNA hsa-miR-320d ARFIP1 miRanda miRanda
14034 chr4 154256251 154256251 1 + T C rs111733088 154256233 + 154256213 154256253 41 CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCTGA CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCCGA < 41bp 1 0.367519724641094 1 0.874791741371155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TRIM2 ENSG00000109654 UTR3 Human protein_coding chr4:154256233 chr4:154256251 . . 0 hm6A_associated_SNPs_6941 0 0 1 4 154256236 154256258 mRNA hsa-miR-181a TRIM2 miRanda miRanda
14034 chr4 154256251 154256251 1 + T C rs111733088 154256233 + 154256213 154256253 41 CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCTGA CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCCGA < 41bp 1 0.367519724641094 1 0.874791741371155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TRIM2 ENSG00000109654 UTR3 Human protein_coding chr4:154256233 chr4:154256251 . . 0 hm6A_associated_SNPs_6941 0 0 1 4 154256236 154256258 mRNA hsa-miR-181b TRIM2 miRanda miRanda
14034 chr4 154256251 154256251 1 + T C rs111733088 154256233 + 154256213 154256253 41 CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCTGA CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCCGA < 41bp 1 0.367519724641094 1 0.874791741371155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TRIM2 ENSG00000109654 UTR3 Human protein_coding chr4:154256233 chr4:154256251 . . 0 hm6A_associated_SNPs_6941 0 0 1 4 154256236 154256258 mRNA hsa-miR-181c TRIM2 miRanda miRanda
14034 chr4 154256251 154256251 1 + T C rs111733088 154256233 + 154256213 154256253 41 CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCTGA CCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCCGA < 41bp 1 0.367519724641094 1 0.874791741371155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TRIM2 ENSG00000109654 UTR3 Human protein_coding chr4:154256233 chr4:154256251 . . 0 hm6A_associated_SNPs_6941 0 0 1 4 154256236 154256258 mRNA hsa-miR-181d TRIM2 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510067 154510088 mRNA hsa-let-7a KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510066 154510088 mRNA hsa-let-7b KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510066 154510088 mRNA hsa-let-7c KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510067 154510088 mRNA hsa-let-7d KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510067 154510088 mRNA hsa-let-7e KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510067 154510088 mRNA hsa-let-7f KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510067 154510088 mRNA hsa-miR-98 KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510066 154510087 mRNA hsa-miR-196a KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510069 154510088 mRNA hsa-let-7g KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510069 154510088 mRNA hsa-let-7i KIAA0922 miRanda miRanda
14034 chr4 154510085 154510085 1 + C T rs147642995 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACTTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA < 41bp 1 0.251181563287845 1 0.787387132644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510085 synonymous SNV . 0 hm6A_associated_SNPs_6946 0 0 1 11 154510066 154510087 mRNA hsa-miR-196b KIAA0922 miRanda miRanda
14034 chr4 156728099 156728099 1 + C T rs71605270 156728117 + 156728097 156728137 41 GACTCCCAAAGTAAGAATTAACATATCATGCTAAGAAAATA GATTCCCAAAGTAAGAATTAACATATCATGCTAAGAAAATA < 41bp 1 0.0321839340720388 1 0.0361597537994385 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 GUCY1B3 ENSG00000061918 UTR3 Human protein_coding chr4:156728117 chr4:156728099 . . 0 hm6A_associated_SNPs_6958 0 0 1 1 156728086 156728108 mRNA hsa-miR-9 GUCY1B3 miRanda miRanda
14034 chr4 159826248 159826248 1 + T C rs148040417 159826256 + 159826236 159826276 41 CTCCAGTGGCTTTAGCAGTGACTGTTTGACATAAAACATGT CTCCAGTGGCTTCAGCAGTGACTGTTTGACATAAAACATGT < 41bp 1 0.314621559705765 1 0.896094977855682 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FNIP2 ENSG00000052795 UTR3 Human protein_coding chr4:159826256 chr4:159826248 . . 0 hm6A_associated_SNPs_6966 0 0 1 5 159826240 159826261 mRNA hsa-miR-101 FNIP2 miRanda miRanda
14034 chr4 159826248 159826248 1 + T C rs148040417 159826256 + 159826236 159826276 41 CTCCAGTGGCTTTAGCAGTGACTGTTTGACATAAAACATGT CTCCAGTGGCTTCAGCAGTGACTGTTTGACATAAAACATGT < 41bp 1 0.314621559705765 1 0.896094977855682 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FNIP2 ENSG00000052795 UTR3 Human protein_coding chr4:159826256 chr4:159826248 . . 0 hm6A_associated_SNPs_6966 0 0 1 5 159826237 159826262 mRNA hsa-miR-212 FNIP2 miRanda miRanda
14034 chr4 159826248 159826248 1 + T C rs148040417 159826256 + 159826236 159826276 41 CTCCAGTGGCTTTAGCAGTGACTGTTTGACATAAAACATGT CTCCAGTGGCTTCAGCAGTGACTGTTTGACATAAAACATGT < 41bp 1 0.314621559705765 1 0.896094977855682 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FNIP2 ENSG00000052795 UTR3 Human protein_coding chr4:159826256 chr4:159826248 . . 0 hm6A_associated_SNPs_6966 0 0 1 5 159826242 159826262 mRNA hsa-miR-132 FNIP2 miRanda miRanda
14034 chr4 159826248 159826248 1 + T C rs148040417 159826256 + 159826236 159826276 41 CTCCAGTGGCTTTAGCAGTGACTGTTTGACATAAAACATGT CTCCAGTGGCTTCAGCAGTGACTGTTTGACATAAAACATGT < 41bp 1 0.314621559705765 1 0.896094977855682 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FNIP2 ENSG00000052795 UTR3 Human protein_coding chr4:159826256 chr4:159826248 . . 0 hm6A_associated_SNPs_6966 0 0 1 5 159826244 159826266 mRNA hsa-miR-505 FNIP2 miRanda miRanda
14034 chr4 159826248 159826248 1 + T C rs148040417 159826256 + 159826236 159826276 41 CTCCAGTGGCTTTAGCAGTGACTGTTTGACATAAAACATGT CTCCAGTGGCTTCAGCAGTGACTGTTTGACATAAAACATGT < 41bp 1 0.314621559705765 1 0.896094977855682 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FNIP2 ENSG00000052795 UTR3 Human protein_coding chr4:159826256 chr4:159826248 . . 0 hm6A_associated_SNPs_6966 0 0 1 5 159826242 159826265 mRNA hsa-miR-421 FNIP2 miRanda miRanda
14034 chr4 164441580 164441580 1 + A G rs73866776 164441578 + 164441558 164441598 41 TTTTCAAGAAAAGAATAAAAACATTAATGCAGTATTAGGTT TTTTCAAGAAAAGAATAAAAACGTTAATGCAGTATTAGGTT Direct Loss 1 0.129257893393241 1 0.0447335541248322 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 TMA16 ENSG00000198498 UTR3 Human protein_coding chr4:164441578 chr4:164441580 . . 0 hm6A_associated_SNPs_6970 0 0 1 6 164441569 164441589 mRNA hsa-miR-33a C4orf43 miRanda miRanda
14034 chr4 164441580 164441580 1 + A G rs73866776 164441578 + 164441558 164441598 41 TTTTCAAGAAAAGAATAAAAACATTAATGCAGTATTAGGTT TTTTCAAGAAAAGAATAAAAACGTTAATGCAGTATTAGGTT Direct Loss 1 0.129257893393241 1 0.0447335541248322 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 TMA16 ENSG00000198498 UTR3 Human protein_coding chr4:164441578 chr4:164441580 . . 0 hm6A_associated_SNPs_6970 0 0 1 6 164441568 164441591 mRNA hsa-miR-217 C4orf43 miRanda miRanda
14034 chr4 164441580 164441580 1 + A G rs73866776 164441578 + 164441558 164441598 41 TTTTCAAGAAAAGAATAAAAACATTAATGCAGTATTAGGTT TTTTCAAGAAAAGAATAAAAACGTTAATGCAGTATTAGGTT Direct Loss 1 0.129257893393241 1 0.0447335541248322 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 TMA16 ENSG00000198498 UTR3 Human protein_coding chr4:164441578 chr4:164441580 . . 0 hm6A_associated_SNPs_6970 0 0 1 6 164441575 164441594 mRNA hsa-miR-200b C4orf43 miRanda miRanda
14034 chr4 164441580 164441580 1 + A G rs73866776 164441578 + 164441558 164441598 41 TTTTCAAGAAAAGAATAAAAACATTAATGCAGTATTAGGTT TTTTCAAGAAAAGAATAAAAACGTTAATGCAGTATTAGGTT Direct Loss 1 0.129257893393241 1 0.0447335541248322 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 TMA16 ENSG00000198498 UTR3 Human protein_coding chr4:164441578 chr4:164441580 . . 0 hm6A_associated_SNPs_6970 0 0 1 6 164441574 164441594 mRNA hsa-miR-200c C4orf43 miRanda miRanda
14034 chr4 164441580 164441580 1 + A G rs73866776 164441578 + 164441558 164441598 41 TTTTCAAGAAAAGAATAAAAACATTAATGCAGTATTAGGTT TTTTCAAGAAAAGAATAAAAACGTTAATGCAGTATTAGGTT Direct Loss 1 0.129257893393241 1 0.0447335541248322 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 TMA16 ENSG00000198498 UTR3 Human protein_coding chr4:164441578 chr4:164441580 . . 0 hm6A_associated_SNPs_6970 0 0 1 6 164441575 164441594 mRNA hsa-miR-429 C4orf43 miRanda miRanda
14034 chr4 164441580 164441580 1 + A G rs73866776 164441578 + 164441558 164441598 41 TTTTCAAGAAAAGAATAAAAACATTAATGCAGTATTAGGTT TTTTCAAGAAAAGAATAAAAACGTTAATGCAGTATTAGGTT Direct Loss 1 0.129257893393241 1 0.0447335541248322 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 TMA16 ENSG00000198498 UTR3 Human protein_coding chr4:164441578 chr4:164441580 . . 0 hm6A_associated_SNPs_6970 0 0 1 6 164441570 164441589 mRNA hsa-miR-33b C4orf43 miRanda miRanda
14034 chr4 166243491 166243491 1 + T C rs75575884 166243475 + 166243455 166243495 41 ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCATAAAG ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCACAAAG < 41bp 1 0.658736262617686 1 0.981821835041046 experiment 0.682527474764627 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 KLHL2 ENSG00000109466 UTR3 Human protein_coding chr4:166243475 chr4:166243491 . . 0 hm6A_associated_SNPs_6971 0 0 1 4 166243485 166243506 mRNA hsa-miR-146a KLHL2 miRanda miRanda
14034 chr4 166243491 166243491 1 + T C rs75575884 166243475 + 166243455 166243495 41 ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCATAAAG ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCACAAAG < 41bp 1 0.658736262617686 1 0.981821835041046 experiment 0.682527474764627 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 KLHL2 ENSG00000109466 UTR3 Human protein_coding chr4:166243475 chr4:166243491 . . 0 hm6A_associated_SNPs_6971 0 0 1 4 166243469 166243493 mRNA hsa-miR-340 KLHL2 miRanda miRanda
14034 chr4 166243491 166243491 1 + T C rs75575884 166243475 + 166243455 166243495 41 ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCATAAAG ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCACAAAG < 41bp 1 0.658736262617686 1 0.981821835041046 experiment 0.682527474764627 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 KLHL2 ENSG00000109466 UTR3 Human protein_coding chr4:166243475 chr4:166243491 . . 0 hm6A_associated_SNPs_6971 0 0 1 4 166243471 166243491 mRNA hsa-miR-488 KLHL2 miRanda miRanda
14034 chr4 166243491 166243491 1 + T C rs75575884 166243475 + 166243455 166243495 41 ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCATAAAG ACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCACAAAG < 41bp 1 0.658736262617686 1 0.981821835041046 experiment 0.682527474764627 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 KLHL2 ENSG00000109466 UTR3 Human protein_coding chr4:166243475 chr4:166243491 . . 0 hm6A_associated_SNPs_6971 0 0 1 4 166243485 166243506 mRNA hsa-miR-146b-5p KLHL2 miRanda miRanda
14034 chr4 169847626 169847626 1 + T C rs574708074 169847634 + 169847614 169847654 41 AAGGCAGAAACATACCTTTGACTATAAGAAATTAAAAAAAA AAGGCAGAAACACACCTTTGACTATAAGAAATTAAAAAAAA < 41bp 1 0.523972876854017 1 0.959292471408844 experiment 0.952054246291965 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 PALLD ENSG00000129116 UTR3 Human protein_coding chr4:169847634 chr4:169847626 . . 0 hm6A_associated_SNPs_6978 0 0 1 2 169847610 169847631 mRNA hsa-miR-196a PALLD miRanda miRanda
14034 chr4 169847626 169847626 1 + T C rs574708074 169847634 + 169847614 169847654 41 AAGGCAGAAACATACCTTTGACTATAAGAAATTAAAAAAAA AAGGCAGAAACACACCTTTGACTATAAGAAATTAAAAAAAA < 41bp 1 0.523972876854017 1 0.959292471408844 experiment 0.952054246291965 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 PALLD ENSG00000129116 UTR3 Human protein_coding chr4:169847634 chr4:169847626 . . 0 hm6A_associated_SNPs_6978 0 0 1 2 169847610 169847631 mRNA hsa-miR-196b PALLD miRanda miRanda
14034 chr4 169847648 169847648 1 + A T rs542531106 169847634 + 169847614 169847654 41 AAGGCAGAAACATACCTTTGACTATAAGAAATTAAAAAAAA AAGGCAGAAACATACCTTTGACTATAAGAAATTATAAAAAA < 41bp 1 0.526794623096201 1 0.956623256206512 experiment 0.946410753807599 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PALLD ENSG00000129116 UTR3 Human protein_coding chr4:169847634 chr4:169847648 . . 0 hm6A_associated_SNPs_6979 1 0 0 1 169847643 169847665 mRNA hsa-miR-9 PALLD miRanda miRanda
14034 chr4 170641538 170641538 1 + A G rs557404445 170641521 + 170641501 170641541 41 GTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTATTT GTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTGTTT < 41bp 1 0.765988272362008 1 0.714801251888275 experiment 0.468023455275985 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170641521 chr4:170641538 . . 0 hm6A_associated_SNPs_6983 0 0 1 2 170641533 170641560 mRNA hsa-miR-26a CLCN3 miRanda miRanda
14034 chr4 170641538 170641538 1 + A G rs557404445 170641521 + 170641501 170641541 41 GTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTATTT GTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTGTTT < 41bp 1 0.765988272362008 1 0.714801251888275 experiment 0.468023455275985 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170641521 chr4:170641538 . . 0 hm6A_associated_SNPs_6983 0 0 1 2 170641534 170641560 mRNA hsa-miR-26b CLCN3 miRanda miRanda
14034 chr4 170642029 170642029 1 + A G rs537212254 170642024 + 170642004 170642044 41 CTTTTTTGTTTTCCTCTCAGACTTTATGGATAATGTGACCG CTTTTTTGTTTTCCTCTCAGACTTTGTGGATAATGTGACCG < 41bp 1 0.594100126249578 1 0.90661084651947 experiment 0.811799747500844 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170642024 chr4:170642029 . . 0 hm6A_associated_SNPs_6985 0 0 1 6 170642021 170642042 mRNA hsa-miR-23a CLCN3 miRanda miRanda
14034 chr4 170642029 170642029 1 + A G rs537212254 170642024 + 170642004 170642044 41 CTTTTTTGTTTTCCTCTCAGACTTTATGGATAATGTGACCG CTTTTTTGTTTTCCTCTCAGACTTTGTGGATAATGTGACCG < 41bp 1 0.594100126249578 1 0.90661084651947 experiment 0.811799747500844 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170642024 chr4:170642029 . . 0 hm6A_associated_SNPs_6985 0 0 1 6 170642021 170642042 mRNA hsa-miR-23b CLCN3 miRanda miRanda
14034 chr4 170642029 170642029 1 + A G rs537212254 170642024 + 170642004 170642044 41 CTTTTTTGTTTTCCTCTCAGACTTTATGGATAATGTGACCG CTTTTTTGTTTTCCTCTCAGACTTTGTGGATAATGTGACCG < 41bp 1 0.594100126249578 1 0.90661084651947 experiment 0.811799747500844 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170642024 chr4:170642029 . . 0 hm6A_associated_SNPs_6985 0 0 1 6 170642007 170642029 mRNA hsa-miR-320a CLCN3 miRanda miRanda
14034 chr4 170642029 170642029 1 + A G rs537212254 170642024 + 170642004 170642044 41 CTTTTTTGTTTTCCTCTCAGACTTTATGGATAATGTGACCG CTTTTTTGTTTTCCTCTCAGACTTTGTGGATAATGTGACCG < 41bp 1 0.594100126249578 1 0.90661084651947 experiment 0.811799747500844 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170642024 chr4:170642029 . . 0 hm6A_associated_SNPs_6985 0 0 1 6 170642007 170642029 mRNA hsa-miR-320b CLCN3 miRanda miRanda
14034 chr4 170642029 170642029 1 + A G rs537212254 170642024 + 170642004 170642044 41 CTTTTTTGTTTTCCTCTCAGACTTTATGGATAATGTGACCG CTTTTTTGTTTTCCTCTCAGACTTTGTGGATAATGTGACCG < 41bp 1 0.594100126249578 1 0.90661084651947 experiment 0.811799747500844 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170642024 chr4:170642029 . . 0 hm6A_associated_SNPs_6985 0 0 1 6 170642009 170642029 mRNA hsa-miR-320c CLCN3 miRanda miRanda
14034 chr4 170642029 170642029 1 + A G rs537212254 170642024 + 170642004 170642044 41 CTTTTTTGTTTTCCTCTCAGACTTTATGGATAATGTGACCG CTTTTTTGTTTTCCTCTCAGACTTTGTGGATAATGTGACCG < 41bp 1 0.594100126249578 1 0.90661084651947 experiment 0.811799747500844 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CLCN3 ENSG00000109572 UTR3 Human protein_coding chr4:170642024 chr4:170642029 . . 0 hm6A_associated_SNPs_6985 0 0 1 6 170642010 170642029 mRNA hsa-miR-320d CLCN3 miRanda miRanda
14034 chr4 174244882 174244882 1 + G A rs150784852 174244869 + 174244849 174244889 41 CAGAAGCTGCTGCCATAATGACTATTTTCTACTGTAGGCTG CAGAAGCTGCTGCCATAATGACTATTTTCTACTATAGGCTG < 41bp 1 0.225563928472543 1 0.721349239349365 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 GALNT7 ENSG00000248774 ncRNA_intronic Human antisense chr4:174244869 chr4:174244882 . . 0 hm6A_associated_SNPs_6991 0 0 1 2 174244863 174244886 mRNA hsa-miR-139-5p GALNT7 miRanda miRanda
14034 chr4 174244882 174244882 1 + G A rs150784852 174244869 + 174244849 174244889 41 CAGAAGCTGCTGCCATAATGACTATTTTCTACTGTAGGCTG CAGAAGCTGCTGCCATAATGACTATTTTCTACTATAGGCTG < 41bp 1 0.225563928472543 1 0.721349239349365 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 GALNT7 ENSG00000248774 ncRNA_intronic Human antisense chr4:174244869 chr4:174244882 . . 0 hm6A_associated_SNPs_6991 0 0 1 2 174244863 174244884 mRNA hsa-miR-376c GALNT7 miRanda miRanda
14034 chr4 178283944 178283944 1 + T C rs35846365 178283926 + 178283906 178283946 41 TATGCTTTTAGTCTCTTGTAACTGGGGAGAAGCAGTGTTTT TATGCTTTTAGTCTCTTGTAACTGGGGAGAAGCAGTGTCTT < 41bp 1 0.0262209413992899 1 0.744442939758301 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 NEIL3 ENSG00000109674 UTR3 Human protein_coding chr4:178283926 chr4:178283944 . . 0 hm6A_associated_SNPs_7009 0 0 1 2 178283924 178283945 mRNA hsa-miR-141 NEIL3 miRanda miRanda
14034 chr4 178283944 178283944 1 + T C rs35846365 178283926 + 178283906 178283946 41 TATGCTTTTAGTCTCTTGTAACTGGGGAGAAGCAGTGTTTT TATGCTTTTAGTCTCTTGTAACTGGGGAGAAGCAGTGTCTT < 41bp 1 0.0262209413992899 1 0.744442939758301 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 NEIL3 ENSG00000109674 UTR3 Human protein_coding chr4:178283926 chr4:178283944 . . 0 hm6A_associated_SNPs_7009 0 0 1 2 178283918 178283945 mRNA hsa-miR-200a NEIL3 miRanda miRanda
14034 chr4 185599489 185599489 1 + G A rs34985821 185599470 + 185599450 185599490 41 TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGT TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAAT < 41bp 1 0.583023557670223 1 0.0288821458816528 experiment 0.833952884659554 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185599470 chr4:185599489 nonsynonymous SNV 0.003 0 hm6A_associated_SNPs_7030 0 0 1 2 185599473 185599494 mRNA hsa-miR-134 CCDC111 miRanda miRanda
14034 chr4 185599489 185599489 1 + G A rs34985821 185599470 + 185599450 185599490 41 TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGT TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAAT < 41bp 1 0.583023557670223 1 0.0288821458816528 experiment 0.833952884659554 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185599470 chr4:185599489 nonsynonymous SNV 0.003 0 hm6A_associated_SNPs_7030 0 0 1 2 185599483 185599504 mRNA hsa-miR-494 CCDC111 miRanda miRanda
14034 chr5 314749 314749 1 + C T rs73734221 314756 + 314736 314776 41 TTAGATTTTGTCACGTGGGGACCCAGCTGTACATATGTGGA TTAGATTTTGTCATGTGGGGACCCAGCTGTACATATGTGGA < 41bp 1 0.185128877167822 1 0.904591798782349 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 14 PDCD6 ENSG00000249915 UTR3 Human protein_coding chr5:314756 chr5:314749 . . 0 hm6A_associated_SNPs_7048 0 0 1 1 314724 314750 mRNA hsa-miR-19a PDCD6 miRanda miRanda
14034 chr5 435941 435941 1 + A G rs187141987 435928 + 435908 435948 41 GGAGAATAATTAGGGACAAGACAGACAAGTATTAATAGCAT GGAGAATAATTAGGGACAAGACAGACAAGTATTGATAGCAT < 41bp 1 0.510970641109768 1 0.526974320411682 experiment 0.978058717780464 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 34 AHRR ENSG00000063438 UTR3 Human protein_coding chr5:435928 chr5:435941 . . 0 hm6A_associated_SNPs_7053 0 0 0 2 435929 435951 mRNA hsa-miR-155 AHRR miRanda miRanda
14034 chr5 435941 435941 1 + A G rs187141987 435928 + 435908 435948 41 GGAGAATAATTAGGGACAAGACAGACAAGTATTAATAGCAT GGAGAATAATTAGGGACAAGACAGACAAGTATTGATAGCAT < 41bp 1 0.510970641109768 1 0.526974320411682 experiment 0.978058717780464 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 34 AHRR ENSG00000063438 UTR3 Human protein_coding chr5:435928 chr5:435941 . . 0 hm6A_associated_SNPs_7053 0 0 0 2 435919 435941 mRNA hsa-miR-429 AHRR miRanda miRanda
14034 chr5 435941 435941 1 + A G rs187141987 435932 + 435912 435952 41 AATAATTAGGGACAAGACAGACAAGTATTAATAGCATTAAA AATAATTAGGGACAAGACAGACAAGTATTGATAGCATTAAA < 41bp 1 0.623777748684672 1 0.377075791358948 experiment 0.752444502630656 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 AHRR ENSG00000063438 UTR3 Human protein_coding chr5:435932 chr5:435941 . . 0 hm6A_associated_SNPs_7054 0 0 0 2 435929 435951 mRNA hsa-miR-155 AHRR miRanda miRanda
14034 chr5 435941 435941 1 + A G rs187141987 435932 + 435912 435952 41 AATAATTAGGGACAAGACAGACAAGTATTAATAGCATTAAA AATAATTAGGGACAAGACAGACAAGTATTGATAGCATTAAA < 41bp 1 0.623777748684672 1 0.377075791358948 experiment 0.752444502630656 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 AHRR ENSG00000063438 UTR3 Human protein_coding chr5:435932 chr5:435941 . . 0 hm6A_associated_SNPs_7054 0 0 0 2 435919 435941 mRNA hsa-miR-429 AHRR miRanda miRanda
14034 chr5 5489494 5489494 1 + A G rs192640824 5489478 + 5489458 5489498 41 GAGGCTTGAGAAGTGCCTTGACACATTTTGAACACAAATAG GAGGCTTGAGAAGTGCCTTGACACATTTTGAACACAGATAG < 41bp 1 0.549703695840848 1 0.0118497014045715 experiment 0.900592608318304 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489478 chr5:5489494 . . 0 hm6A_associated_SNPs_7097 0 0 1 3 5489492 5489512 mRNA hsa-miR-320a KIAA0947 miRanda miRanda
14034 chr5 5489494 5489494 1 + A G rs192640824 5489478 + 5489458 5489498 41 GAGGCTTGAGAAGTGCCTTGACACATTTTGAACACAAATAG GAGGCTTGAGAAGTGCCTTGACACATTTTGAACACAGATAG < 41bp 1 0.549703695840848 1 0.0118497014045715 experiment 0.900592608318304 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489478 chr5:5489494 . . 0 hm6A_associated_SNPs_7097 0 0 1 3 5489492 5489512 mRNA hsa-miR-320b KIAA0947 miRanda miRanda
14034 chr5 5489494 5489494 1 + A G rs192640824 5489478 + 5489458 5489498 41 GAGGCTTGAGAAGTGCCTTGACACATTTTGAACACAAATAG GAGGCTTGAGAAGTGCCTTGACACATTTTGAACACAGATAG < 41bp 1 0.549703695840848 1 0.0118497014045715 experiment 0.900592608318304 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489478 chr5:5489494 . . 0 hm6A_associated_SNPs_7097 0 0 1 3 5489494 5489512 mRNA hsa-miR-320c KIAA0947 miRanda miRanda
14034 chr5 5489494 5489494 1 + A G rs192640824 5489489 + 5489469 5489509 41 AGTGCCTTGACACATTTTGAACACAAATAGTTTGATCAGCT AGTGCCTTGACACATTTTGAACACAGATAGTTTGATCAGCT < 41bp 1 0.611455957769067 1 0.105463564395905 experiment 0.777088084461867 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489489 chr5:5489494 . . 0 hm6A_associated_SNPs_7098 0 0 1 3 5489492 5489512 mRNA hsa-miR-320a KIAA0947 miRanda miRanda
14034 chr5 5489494 5489494 1 + A G rs192640824 5489489 + 5489469 5489509 41 AGTGCCTTGACACATTTTGAACACAAATAGTTTGATCAGCT AGTGCCTTGACACATTTTGAACACAGATAGTTTGATCAGCT < 41bp 1 0.611455957769067 1 0.105463564395905 experiment 0.777088084461867 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489489 chr5:5489494 . . 0 hm6A_associated_SNPs_7098 0 0 1 3 5489492 5489512 mRNA hsa-miR-320b KIAA0947 miRanda miRanda
14034 chr5 5489494 5489494 1 + A G rs192640824 5489489 + 5489469 5489509 41 AGTGCCTTGACACATTTTGAACACAAATAGTTTGATCAGCT AGTGCCTTGACACATTTTGAACACAGATAGTTTGATCAGCT < 41bp 1 0.611455957769067 1 0.105463564395905 experiment 0.777088084461867 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489489 chr5:5489494 . . 0 hm6A_associated_SNPs_7098 0 0 1 3 5489494 5489512 mRNA hsa-miR-320c KIAA0947 miRanda miRanda
14034 chr5 5489527 5489527 1 + G A rs548026164 5489544 + 5489524 5489564 41 GGAGGTTTCAAAACAAAAAGACATAAAATAGATAAAACAGA GGAAGTTTCAAAACAAAAAGACATAAAATAGATAAAACAGA < 41bp 1 0.61130344774276 1 0.219103544950485 experiment 0.77739310451448 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489544 chr5:5489527 . . 0 hm6A_associated_SNPs_7099 0 0 1 2 5489507 5489527 mRNA hsa-miR-204 KIAA0947 miRanda miRanda
14034 chr5 5489527 5489527 1 + G A rs548026164 5489544 + 5489524 5489564 41 GGAGGTTTCAAAACAAAAAGACATAAAATAGATAAAACAGA GGAAGTTTCAAAACAAAAAGACATAAAATAGATAAAACAGA < 41bp 1 0.61130344774276 1 0.219103544950485 experiment 0.77739310451448 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489544 chr5:5489527 . . 0 hm6A_associated_SNPs_7099 0 0 1 2 5489507 5489527 mRNA hsa-miR-211 KIAA0947 miRanda miRanda
14034 chr5 5489777 5489777 1 + G A rs374622641 5489791 + 5489771 5489811 41 TGAGTGGCATTTTATAATGAACTTACCAATATAAAAACATG TGAGTGACATTTTATAATGAACTTACCAATATAAAAACATG < 41bp 1 0.331073098068088 1 0.611608803272247 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 7 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489791 chr5:5489777 . . 0 hm6A_associated_SNPs_7100 0 0 1 2 5489761 5489782 mRNA hsa-miR-365 KIAA0947 miRanda miRanda
14034 chr5 5489777 5489777 1 + G A rs374622641 5489791 + 5489771 5489811 41 TGAGTGGCATTTTATAATGAACTTACCAATATAAAAACATG TGAGTGACATTTTATAATGAACTTACCAATATAAAAACATG < 41bp 1 0.331073098068088 1 0.611608803272247 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 7 ICE1 ENSG00000164151 UTR3 Human protein_coding chr5:5489791 chr5:5489777 . . 0 hm6A_associated_SNPs_7100 0 0 1 2 5489767 5489791 mRNA hsa-miR-433 KIAA0947 miRanda miRanda
14034 chr5 6757067 6757067 1 + T G rs567238436 6757077 + 6757057 6757097 41 TTCGATTTTTTTGTGTGTGGACAACAATATGGAAGCTAAAA TTCGATTTTTGTGTGTGTGGACAACAATATGGAAGCTAAAA < 41bp 1 0.790627438522571 1 0.84560763835907 experiment 0.418745122954858 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 11 PAPD7 ENSG00000112941 UTR3 Human protein_coding chr5:6757077 chr5:6757067 . . 0 hm6A_associated_SNPs_7110 0 0 1 1 6757056 6757077 mRNA hsa-miR-377 PAPD7 miRanda miRanda
14034 chr5 7829445 7829445 1 + G A rs182105921 7829434 + 7829414 7829454 41 GTGTTTTTGCAGGTGAGGAAACAGGGGCAGAGTAATTCAGG GTGTTTTTGCAGGTGAGGAAACAGGGGCAGAATAATTCAGG < 41bp 1 0.0203998322676441 1 0.0533545613288879 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 32 ADCY2 ENSG00000078295 UTR3 Human protein_coding chr5:7829434 chr5:7829445 . . 0 hm6A_associated_SNPs_7111 0 0 0 1 7829441 7829460 mRNA hsa-miR-455-5p ADCY2 miRanda miRanda
14034 chr5 7885959 7885959 1 + A G rs162036 7885953 + 7885933 7885973 41 CCTTTTGAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA CCTTTTGAAAATAAAGGCAGACACAAGGAAGAAAGGTAACA < 41bp 1 0.528039120218144 1 0.956787884235382 experiment 0.943921759563713 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 MTRR ENSG00000124275 CDS Human protein_coding chr5:7885953 chr5:7885959 nonsynonymous SNV 0.975 0 hm6A_associated_SNPs_7112 3 0 1 1 7885938 7885959 mRNA hsa-miR-599 MTRR miRanda miRanda
14034 chr5 8460453 8460453 1 + C T rs79804225 8460464 + 8460444 8460484 41 CCTTCTTTACACCCTGGAGAACTTCACAGGGAATCTGTGTC CCTTCTTTATACCCTGGAGAACTTCACAGGGAATCTGTGTC < 41bp 1 0.733940135396722 1 0.800923824310303 experiment 0.532119729206557 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 MIR4458HG ENSG00000247516 ncRNA_exonic Human lincRNA chr5:8460464 chr5:8460453 . . 0 hm6A_associated_SNPs_7116 0 0 1 1 8460452 8460472 lncRNA hsa-miR-3611 MIR4458HG miRanda starBase2
14034 chr5 8460548 8460548 1 + C T rs62357248 8460551 + 8460531 8460571 41 TGGTTATTTAAGTCCTGCGGACTTACTCTGCCAAAATTATT TGGTTATTTAAGTCCTGTGGACTTACTCTGCCAAAATTATT < 41bp 1 0.44113423221604 1 0.954952299594879 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 MIR4458HG ENSG00000247516 ncRNA_exonic Human lincRNA chr5:8460551 chr5:8460548 . . 0 hm6A_associated_SNPs_7117 0 0 1 1 8460529 8460549 lncRNA hsa-miR-1286 MIR4458HG miRanda starBase2
14034 chr5 10433983 10433983 1 + T C rs548320880 10433976 + 10433956 10433996 41 TGTTCTCCCTGGATCTTCTGACATTACTGCTGTCTGAGATT TGTTCTCCCTGGATCTTCTGACATTACCGCTGTCTGAGATT < 41bp 1 0.73003596157189 1 0.972026228904724 experiment 0.53992807685622 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 28 MARCH6 ENSG00000145495 UTR3 Human protein_coding chr5:10433976 chr5:10433983 . . 0 hm6A_associated_SNPs_7126 0 0 1 2 10433974 10433997 mRNA hsa-miR-216a MARCH6 miRanda miRanda
14034 chr5 10433983 10433983 1 + T C rs548320880 10433976 + 10433956 10433996 41 TGTTCTCCCTGGATCTTCTGACATTACTGCTGTCTGAGATT TGTTCTCCCTGGATCTTCTGACATTACCGCTGTCTGAGATT < 41bp 1 0.73003596157189 1 0.972026228904724 experiment 0.53992807685622 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 28 MARCH6 ENSG00000145495 UTR3 Human protein_coding chr5:10433976 chr5:10433983 . . 0 hm6A_associated_SNPs_7126 0 0 1 2 10433971 10433993 mRNA hsa-miR-421 MARCH6 miRanda miRanda
14034 chr5 10433996 10433996 1 + T A rs77353977 10433976 + 10433956 10433996 41 TGTTCTCCCTGGATCTTCTGACATTACTGCTGTCTGAGATT TGTTCTCCCTGGATCTTCTGACATTACTGCTGTCTGAGATA < 41bp 1 0.747720269442844 1 0.972479104995728 experiment 0.504559461114312 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 MARCH6 ENSG00000145495 UTR3 Human protein_coding chr5:10433976 chr5:10433996 . . 0 hm6A_associated_SNPs_7127 0 0 1 1 10433974 10433997 mRNA hsa-miR-216a MARCH6 miRanda miRanda
14034 chr5 10434175 10434175 1 + T C rs558820628 10434173 + 10434153 10434193 41 AGCAGTAGTGCGCAGGCAAGACTTTTCAGTGACGCCTTGTG AGCAGTAGTGCGCAGGCAAGACCTTTCAGTGACGCCTTGTG < 41bp 1 0.508203268591112 1 0.94877028465271 experiment 0.983593462817776 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 23 MARCH6 ENSG00000145495 UTR3 Human protein_coding chr5:10434173 chr5:10434175 . . 0 hm6A_associated_SNPs_7128 0 0 1 2 10434149 10434175 mRNA hsa-miR-346 MARCH6 miRanda miRanda
14034 chr5 10434175 10434175 1 + T C rs558820628 10434173 + 10434153 10434193 41 AGCAGTAGTGCGCAGGCAAGACTTTTCAGTGACGCCTTGTG AGCAGTAGTGCGCAGGCAAGACCTTTCAGTGACGCCTTGTG < 41bp 1 0.508203268591112 1 0.94877028465271 experiment 0.983593462817776 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 23 MARCH6 ENSG00000145495 UTR3 Human protein_coding chr5:10434173 chr5:10434175 . . 0 hm6A_associated_SNPs_7128 0 0 1 2 10434154 10434175 mRNA hsa-miR-431 MARCH6 miRanda miRanda
14034 chr5 14508612 14508612 1 + A G rs141909554 14508602 + 14508582 14508622 41 ATCTGAATTTTCAAGAGAAAACAAGCAAACATAACTGATCA ATCTGAATTTTCAAGAGAAAACAAGCAAACGTAACTGATCA < 41bp 1 0.711969700472272 1 0.995314717292786 experiment 0.576060599055457 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 31 TRIO ENSG00000038382 UTR3 Human protein_coding chr5:14508602 chr5:14508612 . . 0 hm6A_associated_SNPs_7141 0 0 1 1 14508606 14508629 mRNA hsa-miR-34c-5p TRIO miRanda miRanda
14034 chr5 14508612 14508612 1 + A G rs141909554 14508610 + 14508590 14508630 41 TTTCAAGAGAAAACAAGCAAACATAACTGATCAGCTGCCGG TTTCAAGAGAAAACAAGCAAACGTAACTGATCAGCTGCCGG Direct Loss 1 0.58734147951968 1 0.995745241641998 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 23 TRIO ENSG00000038382 UTR3 Human protein_coding chr5:14508610 chr5:14508612 . . 0 hm6A_associated_SNPs_7142 0 0 1 1 14508606 14508629 mRNA hsa-miR-34c-5p TRIO miRanda miRanda
14034 chr5 14508612 14508612 1 + A G rs141909554 14508615 + 14508595 14508635 41 AGAGAAAACAAGCAAACATAACTGATCAGCTGCCGGTATGT AGAGAAAACAAGCAAACGTAACTGATCAGCTGCCGGTATGT < 41bp 1 0.664164119770474 1 0.996783018112183 experiment 0.671671760459053 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 18 TRIO ENSG00000038382 UTR3 Human protein_coding chr5:14508615 chr5:14508612 . . 0 hm6A_associated_SNPs_7143 0 0 1 1 14508606 14508629 mRNA hsa-miR-34c-5p TRIO miRanda miRanda
14034 chr5 14508910 14508910 1 + T C rs73752105 14508903 + 14508883 14508923 41 TCAACCACTGGTGTTAATGAACAAAGATACTGTGCGTCTCT TCAACCACTGGTGTTAATGAACAAAGACACTGTGCGTCTCT < 41bp 1 0.66413315422784 1 0.969168901443481 experiment 0.67173369154432 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 TRIO ENSG00000038382 UTR3 Human protein_coding chr5:14508903 chr5:14508910 . . 0 hm6A_associated_SNPs_7145 0 0 1 2 14508895 14508916 mRNA hsa-miR-101 TRIO miRanda miRanda
14034 chr5 14508910 14508910 1 + T C rs73752105 14508903 + 14508883 14508923 41 TCAACCACTGGTGTTAATGAACAAAGATACTGTGCGTCTCT TCAACCACTGGTGTTAATGAACAAAGACACTGTGCGTCTCT < 41bp 1 0.66413315422784 1 0.969168901443481 experiment 0.67173369154432 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 TRIO ENSG00000038382 UTR3 Human protein_coding chr5:14508903 chr5:14508910 . . 0 hm6A_associated_SNPs_7145 0 0 1 2 14508897 14508916 mRNA hsa-miR-144 TRIO miRanda miRanda
14034 chr5 27496246 27496246 1 + T A rs144918327 27496259 + 27496239 27496279 41 AAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTC AAGATGGACTCGATCTCCTGACCTCGTGATCTGCCCACCTC < 41bp 1 0.0254425381427496 1 0.00228944420814514 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 LINC01021 ENSG00000250337 ncRNA_exonic Human lincRNA chr5:27496259 chr5:27496246 . . 0 hm6A_associated_SNPs_7180 0 0 0 7 27496242 27496264 mRNA hsa-let-7a LOC643401 miRanda miRanda
14034 chr5 27496246 27496246 1 + T A rs144918327 27496259 + 27496239 27496279 41 AAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTC AAGATGGACTCGATCTCCTGACCTCGTGATCTGCCCACCTC < 41bp 1 0.0254425381427496 1 0.00228944420814514 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 LINC01021 ENSG00000250337 ncRNA_exonic Human lincRNA chr5:27496259 chr5:27496246 . . 0 hm6A_associated_SNPs_7180 0 0 0 7 27496242 27496264 mRNA hsa-let-7b LOC643401 miRanda miRanda
14034 chr5 27496246 27496246 1 + T A rs144918327 27496259 + 27496239 27496279 41 AAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTC AAGATGGACTCGATCTCCTGACCTCGTGATCTGCCCACCTC < 41bp 1 0.0254425381427496 1 0.00228944420814514 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 LINC01021 ENSG00000250337 ncRNA_exonic Human lincRNA chr5:27496259 chr5:27496246 . . 0 hm6A_associated_SNPs_7180 0 0 0 7 27496242 27496264 mRNA hsa-let-7c LOC643401 miRanda miRanda
14034 chr5 27496246 27496246 1 + T A rs144918327 27496259 + 27496239 27496279 41 AAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTC AAGATGGACTCGATCTCCTGACCTCGTGATCTGCCCACCTC < 41bp 1 0.0254425381427496 1 0.00228944420814514 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 LINC01021 ENSG00000250337 ncRNA_exonic Human lincRNA chr5:27496259 chr5:27496246 . . 0 hm6A_associated_SNPs_7180 0 0 0 7 27496242 27496264 mRNA hsa-let-7d LOC643401 miRanda miRanda
14034 chr5 27496246 27496246 1 + T A rs144918327 27496259 + 27496239 27496279 41 AAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTC AAGATGGACTCGATCTCCTGACCTCGTGATCTGCCCACCTC < 41bp 1 0.0254425381427496 1 0.00228944420814514 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 LINC01021 ENSG00000250337 ncRNA_exonic Human lincRNA chr5:27496259 chr5:27496246 . . 0 hm6A_associated_SNPs_7180 0 0 0 7 27496242 27496264 mRNA hsa-let-7e LOC643401 miRanda miRanda
14034 chr5 27496246 27496246 1 + T A rs144918327 27496259 + 27496239 27496279 41 AAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTC AAGATGGACTCGATCTCCTGACCTCGTGATCTGCCCACCTC < 41bp 1 0.0254425381427496 1 0.00228944420814514 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 LINC01021 ENSG00000250337 ncRNA_exonic Human lincRNA chr5:27496259 chr5:27496246 . . 0 hm6A_associated_SNPs_7180 0 0 0 7 27496242 27496264 mRNA hsa-let-7f LOC643401 miRanda miRanda
14034 chr5 27496246 27496246 1 + T A rs144918327 27496259 + 27496239 27496279 41 AAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTC AAGATGGACTCGATCTCCTGACCTCGTGATCTGCCCACCTC < 41bp 1 0.0254425381427496 1 0.00228944420814514 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 LINC01021 ENSG00000250337 ncRNA_exonic Human lincRNA chr5:27496259 chr5:27496246 . . 0 hm6A_associated_SNPs_7180 0 0 0 7 27496242 27496264 mRNA hsa-let-7i LOC643401 miRanda miRanda
14034 chr5 32109680 32109680 1 + G T rs116035640 32109675 + 32109655 32109695 41 GGTCATAAAGAGGAGGAGAAACAGGGTGAGTCAAGGTAAAG GGTCATAAAGAGGAGGAGAAACAGGTTGAGTCAAGGTAAAG < 41bp 1 0.0151458323487305 1 0.0723710954189301 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 PDZD2 ENSG00000250764 ncRNA_intronic Human antisense chr5:32109675 chr5:32109680 . . 0 hm6A_associated_SNPs_7188 0 0 0 2 32109660 32109682 mRNA hsa-miR-10a PDZD2 miRanda miRanda
14034 chr5 32109680 32109680 1 + G T rs116035640 32109675 + 32109655 32109695 41 GGTCATAAAGAGGAGGAGAAACAGGGTGAGTCAAGGTAAAG GGTCATAAAGAGGAGGAGAAACAGGTTGAGTCAAGGTAAAG < 41bp 1 0.0151458323487305 1 0.0723710954189301 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 PDZD2 ENSG00000250764 ncRNA_intronic Human antisense chr5:32109675 chr5:32109680 . . 0 hm6A_associated_SNPs_7188 0 0 0 2 32109660 32109682 mRNA hsa-miR-10b PDZD2 miRanda miRanda
14034 chr5 32602222 32602222 1 + A G rs376023071 32602218 + 32602198 32602238 41 TTGGCCTTTGCCCCAGTAGAACAGACCAATGGCATTCTAGA TTGGCCTTTGCCCCAGTAGAACAGGCCAATGGCATTCTAGA < 41bp 1 0.384159739137477 1 0.0315384566783905 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 25 SUB1 ENSG00000113387 UTR3 Human protein_coding chr5:32602218 chr5:32602222 . . 0 hm6A_associated_SNPs_7189 0 0 1 1 32602210 32602232 mRNA hsa-miR-33b SUB1 miRanda miRanda
14034 chr5 32602637 32602637 1 + T C rs78936561 32602656 + 32602636 32602676 41 GTTTGATTCATACATCTAAAACATTTTGTAGTTACTTGTCA GCTTGATTCATACATCTAAAACATTTTGTAGTTACTTGTCA < 41bp 1 0.230718670842894 1 0.0271041393280029 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SUB1 ENSG00000113387 UTR3 Human protein_coding chr5:32602656 chr5:32602637 . . 0 hm6A_associated_SNPs_7190 0 0 1 1 32602629 32602650 mRNA hsa-miR-653 SUB1 miRanda miRanda
14034 chr5 32791157 32791157 1 + G A rs538569113 32791173 + 32791153 32791193 41 TCACGGTGCATGATAGTTGGACAGAGATGGCTAAAAAAGAG TCACAGTGCATGATAGTTGGACAGAGATGGCTAAAAAAGAG < 41bp 1 0.0478759997463716 1 0.534417152404785 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 5 NPR3 ENSG00000113389;ENSG00000181495 UTR3 Human other chr5:32791173 chr5:32791157 . . 0 hm6A_associated_SNPs_7191 0 0 0 1 32791136 32791157 mRNA hsa-miR-542-3p C5orf23 miRanda miRanda
14034 chr5 34832259 34832259 1 + T C rs140961358 34832251 + 34832231 34832271 41 TGGACTCTCCAAAGTATTTAACTGAAAGTAGGGCCTGCTCT TGGACTCTCCAAAGTATTTAACTGAAAGCAGGGCCTGCTCT < 41bp 1 0.172508872158687 1 0.736924588680267 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 RAI14 ENSG00000039560 UTR3 Human protein_coding chr5:34832251 chr5:34832259 . . 0 hm6A_associated_SNPs_7213 0 0 1 1 34832256 34832279 mRNA hsa-miR-339-5p RAI14 miRanda miRanda
14034 chr5 34950334 34950334 1 + A G rs143510769 34950354 + 34950334 34950374 41 AGATACTAACTTAAATCAAGACAGTGCCAAAGAATTGGAAG GGATACTAACTTAAATCAAGACAGTGCCAAAGAATTGGAAG < 41bp 1 0.786973850254882 1 0.905932724475861 experiment 0.426052299490236 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34950354 chr5:34950334 synonymous SNV . 0 hm6A_associated_SNPs_7217 0 0 1 1 34950324 34950346 mRNA hsa-miR-382 DNAJC21 miRanda miRanda
14034 chr5 34950350 34950350 1 + C G rs146564466 34950354 + 34950334 34950374 41 AGATACTAACTTAAATCAAGACAGTGCCAAAGAATTGGAAG AGATACTAACTTAAATGAAGACAGTGCCAAAGAATTGGAAG < 41bp 1 0.791669849581896 1 0.93732213973999 experiment 0.416660300836208 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34950354 chr5:34950350 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_7218 0 0 1 2 34950341 34950364 mRNA hsa-miR-96 DNAJC21 miRanda miRanda
14034 chr5 34950350 34950350 1 + C G rs146564466 34950354 + 34950334 34950374 41 AGATACTAACTTAAATCAAGACAGTGCCAAAGAATTGGAAG AGATACTAACTTAAATGAAGACAGTGCCAAAGAATTGGAAG < 41bp 1 0.791669849581896 1 0.93732213973999 experiment 0.416660300836208 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34950354 chr5:34950350 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_7218 0 0 1 2 34950343 34950364 mRNA hsa-miR-1271 DNAJC21 miRanda miRanda
14034 chr5 34950786 34950786 1 + C T rs527282480 34950776 + 34950756 34950796 41 GACACTCACATGAGAACAAGACTCCTGCTGCGTCCCTGGAG GACACTCACATGAGAACAAGACTCCTGCTGTGTCCCTGGAG < 41bp 1 0.478518651154469 1 0.745376706123352 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 DNAJC21 ENSG00000168724 intronic Human protein_coding chr5:34950776 chr5:34950786 . . 0 hm6A_associated_SNPs_7219 0 0 1 1 34950765 34950786 mRNA hsa-miR-214 DNAJC21 miRanda miRanda
14034 chr5 34957827 34957827 1 + A G rs12153787 34957833 + 34957813 34957853 41 AGTAAAATTCCTATAGCAAGACATAGTTTCATTTTAGAGGA AGTAAAATTCCTATGGCAAGACATAGTTTCATTTTAGAGGA < 41bp 1 0.0806658396316453 1 0.00154063105583191 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 DNAJC21 ENSG00000168724 UTR3 Human protein_coding chr5:34957833 chr5:34957827 . . 0 hm6A_associated_SNPs_7223 0 0 0 1 34957815 34957835 mRNA hsa-miR-431 DNAJC21 miRanda miRanda
14034 chr5 38464281 38464281 1 + A G rs751416 38464274 + 38464254 38464294 41 CTGGGTGGCCTTTCCTGCTGACACTCCACGAGCTGACCCAG CTGGGTGGCCTTTCCTGCTGACACTCCGCGAGCTGACCCAG < 41bp 1 0.226664523729543 1 0.849466323852539 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 EGFLAM ENSG00000251257 ncRNA_intronic Human antisense chr5:38464274 chr5:38464281 . . 0 hm6A_associated_SNPs_7259 0 0 0 1 38464260 38464281 mRNA hsa-miR-122 EGFLAM miRanda miRanda
14034 chr5 38933862 38933862 1 + C G rs548372381 38933843 + 38933823 38933863 41 TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCACT TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCAGT < 41bp 1 0.210127959245363 1 0.0974604189395905 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 OSMR ENSG00000145623 UTR3 Human protein_coding chr5:38933843 chr5:38933862 . . 0 hm6A_associated_SNPs_7265 0 0 1 4 38933853 38933873 mRNA hsa-miR-101 OSMR miRanda miRanda
14034 chr5 38933862 38933862 1 + C G rs548372381 38933843 + 38933823 38933863 41 TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCACT TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCAGT < 41bp 1 0.210127959245363 1 0.0974604189395905 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 OSMR ENSG00000145623 UTR3 Human protein_coding chr5:38933843 chr5:38933862 . . 0 hm6A_associated_SNPs_7265 0 0 1 4 38933857 38933880 mRNA hsa-miR-10a OSMR miRanda miRanda
14034 chr5 38933862 38933862 1 + C G rs548372381 38933843 + 38933823 38933863 41 TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCACT TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCAGT < 41bp 1 0.210127959245363 1 0.0974604189395905 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 OSMR ENSG00000145623 UTR3 Human protein_coding chr5:38933843 chr5:38933862 . . 0 hm6A_associated_SNPs_7265 0 0 1 4 38933856 38933880 mRNA hsa-miR-10b OSMR miRanda miRanda
14034 chr5 38933862 38933862 1 + C G rs548372381 38933843 + 38933823 38933863 41 TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCACT TGACCTAAGGATATGCATTAACCACTCTACAGACTCCCAGT < 41bp 1 0.210127959245363 1 0.0974604189395905 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 OSMR ENSG00000145623 UTR3 Human protein_coding chr5:38933843 chr5:38933862 . . 0 hm6A_associated_SNPs_7265 0 0 1 4 38933857 38933878 mRNA hsa-miR-486-5p OSMR miRanda miRanda
14034 chr5 42800004 42800004 1 + A G rs4987017 42800014 + 42799994 42800034 41 TTTTTATTGAATTTATTTGGACAAATCCGTACTGTATCCAA TTTTTATTGAGTTTATTTGGACAAATCCGTACTGTATCCAA < 41bp 1 0.687331634059682 1 0.3670254945755 experiment 0.625336731880637 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 11 CCDC152;SELENOP ENSG00000198865;ENSG00000250722 UTR3 Human other chr5:42800014 chr5:42800004 . . 0 hm6A_associated_SNPs_7273 0 0 0 1 42800001 42800021 mRNA hsa-miR-219-5p CCDC152 miRanda miRanda
14034 chr5 42800022 42800022 1 + G A rs141459744 42800014 + 42799994 42800034 41 TTTTTATTGAATTTATTTGGACAAATCCGTACTGTATCCAA TTTTTATTGAATTTATTTGGACAAATCCATACTGTATCCAA < 41bp 1 0.719691958539573 1 0.500309824943542 experiment 0.560616082920854 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 29 CCDC152;SELENOP ENSG00000198865;ENSG00000250722 UTR3 Human other chr5:42800014 chr5:42800022 . . 0 hm6A_associated_SNPs_7274 0 0 0 1 42800009 42800029 mRNA hsa-miR-101 CCDC152 miRanda miRanda
14034 chr5 43044839 43044839 1 + A C rs147027156 43044831 + 43044811 43044851 41 AGGGCAGGAGAGAAAAATGAACTGCAAGACTCCAGCACAAG AGGGCAGGAGAGAAAAATGAACTGCAAGCCTCCAGCACAAG < 41bp 1 0.543367315066763 1 0.974358439445496 experiment 0.913265369866475 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 LOC153684 ENSG00000215068 ncRNA_exonic Human antisense chr5:43044831 chr5:43044839 . . 0 hm6A_associated_SNPs_7275 0 0 0 1 43044821 43044841 mRNA hsa-miR-431 LOC153684 miRanda miRanda
14034 chr5 43175953 43175953 1 + G C rs13665 43175962 + 43175942 43175982 41 TTATATTTTTGGTTATAATGACAACCACCAGTTCTTTTTCA TTATATTTTTGCTTATAATGACAACCACCAGTTCTTTTTCA < 41bp 1 0.387158925424381 1 0.277324140071869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 ZNF131 ENSG00000172262 UTR3 Human protein_coding chr5:43175962 chr5:43175953 . . 0 hm6A_associated_SNPs_7277 0 0 0 1 43175951 43175971 mRNA hsa-miR-140-5p ZNF131 miRanda miRanda
14034 chr5 44815382 44815382 1 + C A rs79210252 44815377 + 44815357 44815397 41 CAATAATGATGAGATTTGTAACTGTCAACTATTAAATACAT CAATAATGATGAGATTTGTAACTGTAAACTATTAAATACAT < 41bp 1 0.622306698848205 1 0.882808685302734 experiment 0.75538660230359 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 MRPS30 ENSG00000112996 UTR3 Human protein_coding chr5:44815377 chr5:44815382 . . 0 hm6A_associated_SNPs_7289 0 0 1 1 44815364 44815385 mRNA hsa-miR-542-3p MRPS30 miRanda miRanda
14034 chr5 52097717 52097717 1 + T A rs114994035 52097715 + 52097695 52097735 41 GACAATCTTGTGTTTCCTAAACTGTTACAGTACATTTCTCA GACAATCTTGTGTTTCCTAAACAGTTACAGTACATTTCTCA < 41bp 1 0.382434933785328 1 0.950048387050629 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 23 PELO ENSG00000152684 UTR3 Human protein_coding chr5:52097715 chr5:52097717 . . 0 hm6A_associated_SNPs_7292 0 0 1 2 52097702 52097723 mRNA hsa-miR-194 PELO miRanda miRanda
14034 chr5 52097717 52097717 1 + T A rs114994035 52097715 + 52097695 52097735 41 GACAATCTTGTGTTTCCTAAACTGTTACAGTACATTTCTCA GACAATCTTGTGTTTCCTAAACAGTTACAGTACATTTCTCA < 41bp 1 0.382434933785328 1 0.950048387050629 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 23 PELO ENSG00000152684 UTR3 Human protein_coding chr5:52097715 chr5:52097717 . . 0 hm6A_associated_SNPs_7292 0 0 1 2 52097713 52097735 mRNA hsa-miR-539 PELO miRanda miRanda
14034 chr5 52248708 52248708 1 + G A rs73754081 52248695 + 52248675 52248715 41 GGATATCCATGTTCAGCATGACAGTCAGCACTCGTAAATGC GGATATCCATGTTCAGCATGACAGTCAGCACTCATAAATGC < 41bp 1 0.026069002862973 1 0.0250221788883209 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 34 ITGA1 ENSG00000249899 ncRNA_intronic Human antisense chr5:52248695 chr5:52248708 . . 0 hm6A_associated_SNPs_7293 0 0 1 1 52248686 52248708 mRNA hsa-miR-485-5p ITGA1 miRanda miRanda
14034 chr5 54462480 54462480 1 + T C rs35686230 54462474 + 54462454 54462494 41 TTGAATCTTTCCTATATTGGACAATCTTCCTTCAGTCTTGT TTGAATCTTTCCTATATTGGACAATCCTCCTTCAGTCTTGT < 41bp 1 0.557678158174842 1 0.409405648708344 experiment 0.884643683650316 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 27 GPX8 ENSG00000164294 UTR3 Human protein_coding chr5:54462474 chr5:54462480 . . 0 hm6A_associated_SNPs_7301 0 0 1 1 54462460 54462480 mRNA hsa-miR-219-5p GPX8 miRanda miRanda
14034 chr5 54720863 54720863 1 - C T rs143212003 54720845 - 54720825 54720865 41 TGGTTATCTAATAGCTCTAAACTCATTAAAAAAACTCCAAG TGATTATCTAATAGCTCTAAACTCATTAAAAAAACTCCAAG < 41bp 1 0.498425422618852 1 0.900697350502014 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 PLPP1;SKIV2L2 ENSG00000039123;ENSG00000067113 UTR3 Human other chr5:54720845 chr5:54720863 . . 0 hm6A_associated_SNPs_7306 0 0 1 1 54720848 54720870 mRNA hsa-miR-496 PPAP2A miRanda miRanda
14034 chr5 56189725 56189725 1 + G A rs547586518 56189737 + 56189717 56189757 41 TAAACTGTGCCTTTCAAAGAACTGGCCCTAGGTGAACAGGA TAAACTGTACCTTTCAAAGAACTGGCCCTAGGTGAACAGGA < 41bp 1 0.708852732220144 1 0.987993717193604 experiment 0.582294535559712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 MAP3K1 ENSG00000095015 UTR3 Human protein_coding chr5:56189737 chr5:56189725 . . 0 hm6A_associated_SNPs_7313 0 0 0 3 56189711 56189730 mRNA hsa-miR-124 MAP3K1 miRanda miRanda
14034 chr5 56189725 56189725 1 + G A rs547586518 56189737 + 56189717 56189757 41 TAAACTGTGCCTTTCAAAGAACTGGCCCTAGGTGAACAGGA TAAACTGTACCTTTCAAAGAACTGGCCCTAGGTGAACAGGA < 41bp 1 0.708852732220144 1 0.987993717193604 experiment 0.582294535559712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 MAP3K1 ENSG00000095015 UTR3 Human protein_coding chr5:56189737 chr5:56189725 . . 0 hm6A_associated_SNPs_7313 0 0 0 3 56189712 56189733 mRNA hsa-miR-488 MAP3K1 miRanda miRanda
14034 chr5 56189725 56189725 1 + G A rs547586518 56189737 + 56189717 56189757 41 TAAACTGTGCCTTTCAAAGAACTGGCCCTAGGTGAACAGGA TAAACTGTACCTTTCAAAGAACTGGCCCTAGGTGAACAGGA < 41bp 1 0.708852732220144 1 0.987993717193604 experiment 0.582294535559712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 MAP3K1 ENSG00000095015 UTR3 Human protein_coding chr5:56189737 chr5:56189725 . . 0 hm6A_associated_SNPs_7313 0 0 0 3 56189710 56189730 mRNA hsa-miR-506 MAP3K1 miRanda miRanda
14034 chr5 56542905 56542905 1 + A G rs151161676 56542923 + 56542903 56542943 41 CTACACAATGGAAAAGCCAAACAAAAGAAAATAAAGTTGGA CTGCACAATGGAAAAGCCAAACAAAAGAAAATAAAGTTGGA < 41bp 1 0.703649288114633 1 0.080371230840683 experiment 0.592701423770734 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56542923 chr5:56542905 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_7319 0 0 1 2 56542902 56542923 mRNA hsa-miR-135a GPBP1 miRanda miRanda
14034 chr5 56542905 56542905 1 + A G rs151161676 56542923 + 56542903 56542943 41 CTACACAATGGAAAAGCCAAACAAAAGAAAATAAAGTTGGA CTGCACAATGGAAAAGCCAAACAAAAGAAAATAAAGTTGGA < 41bp 1 0.703649288114633 1 0.080371230840683 experiment 0.592701423770734 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56542923 chr5:56542905 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_7319 0 0 1 2 56542902 56542923 mRNA hsa-miR-135b GPBP1 miRanda miRanda
14034 chr5 61924199 61924199 1 + G A rs541528381 61924207 + 61924187 61924227 41 TTGCCATTTATTGTAAGGAAACTTTAAAGCATTTTTTAGGA TTGCCATTTATTATAAGGAAACTTTAAAGCATTTTTTAGGA < 41bp 1 0.121357882488952 1 0.715023696422577 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 IPO11-LRRC70 ENSG00000086200 UTR3 Human protein_coding chr5:61924207 chr5:61924199 . . 0 hm6A_associated_SNPs_7326 0 0 1 1 61924199 61924221 mRNA hsa-miR-155 IPO11 miRanda miRanda
14034 chr5 65374519 65374519 1 + A G rs16894862 65374501 + 65374481 65374521 41 TACATTAATGAAATAATGGAACTTGTGGTTAGAGGGAAAGA TACATTAATGAAATAATGGAACTTGTGGTTAGAGGGAAGGA < 41bp 1 0.645531028233757 1 0.975168943405151 experiment 0.708937943532487 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ERBIN ENSG00000112851 UTR3 Human protein_coding chr5:65374501 chr5:65374519 . . 0 hm6A_associated_SNPs_7345 0 0 1 1 65374506 65374528 mRNA hsa-miR-140-5p ERBB2IP miRanda miRanda
14034 chr5 65374519 65374519 1 + A G rs16894862 65374522 + 65374502 65374542 41 CTTGTGGTTAGAGGGAAAGAACCACTGTACAGAATATAAAG CTTGTGGTTAGAGGGAAGGAACCACTGTACAGAATATAAAG < 41bp 1 0.400049649687893 1 0.955979466438293 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 ERBIN ENSG00000112851 UTR3 Human protein_coding chr5:65374522 chr5:65374519 . . 0 hm6A_associated_SNPs_7346 0 0 1 1 65374506 65374528 mRNA hsa-miR-140-5p ERBB2IP miRanda miRanda
14034 chr5 65474836 65474836 1 + T C rs111240132 65474832 + 65474812 65474852 41 GCTTTTCCAGTTGTTAGATGACTTTGTGGCCATCTTGTTAT GCTTTTCCAGTTGTTAGATGACTTCGTGGCCATCTTGTTAT < 41bp 1 0.670091499851543 1 0.977301716804504 experiment 0.659817000296913 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 SREK1 ENSG00000153914 UTR3 Human protein_coding chr5:65474832 chr5:65474836 . . 0 hm6A_associated_SNPs_7348 0 0 1 1 65474815 65474836 mRNA hsa-miR-224 SFRS12 miRanda miRanda
14034 chr5 65474870 65474870 1 + C G rs536732169 65474889 + 65474869 65474909 41 GCATGGACATCATGAAAATAACAGATGTTACCCAAACTCAT GGATGGACATCATGAAAATAACAGATGTTACCCAAACTCAT < 41bp 1 0.758147156001684 1 0.967711925506592 experiment 0.483705687996631 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 SREK1 ENSG00000153914 UTR3 Human protein_coding chr5:65474889 chr5:65474870 . . 0 hm6A_associated_SNPs_7350 0 0 1 1 65474862 65474884 mRNA hsa-miR-433 SFRS12 miRanda miRanda
14034 chr5 68399865 68399865 1 + G A rs149411489 68399868 + 68399848 68399888 41 TCCTAGGAAACTAGTGGGAAACTGAGAAATCATAAAATTGT TCCTAGGAAACTAGTGGAAAACTGAGAAATCATAAAATTGT < 41bp 1 0.141133950372794 1 0.10349714756012 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68399868 chr5:68399865 nonsynonymous SNV 0.038 1 hm6A_associated_SNPs_7368 0 0 1 1 68399851 68399875 mRNA hsa-miR-145 SLC30A5 miRanda miRanda
14034 chr5 70834892 70834892 1 + C A rs35131626 70834886 + 70834866 70834906 41 TAGGAAATGACCACAAGTGAACATATCCAAGATGAACCAGG TAGGAAATGACCACAAGTGAACATATACAAGATGAACCAGG < 41bp 1 0.219705720394383 1 0.589574158191681 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70834886 chr5:70834892 synonymous SNV . 0 hm6A_associated_SNPs_7383 0 1 1 3 70834872 70834893 mRNA hsa-miR-190 BDP1 miRanda miRanda
14034 chr5 70834892 70834892 1 + C A rs35131626 70834886 + 70834866 70834906 41 TAGGAAATGACCACAAGTGAACATATCCAAGATGAACCAGG TAGGAAATGACCACAAGTGAACATATACAAGATGAACCAGG < 41bp 1 0.219705720394383 1 0.589574158191681 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70834886 chr5:70834892 synonymous SNV . 0 hm6A_associated_SNPs_7383 0 1 1 3 70834873 70834894 mRNA hsa-miR-613 BDP1 miRanda miRanda
14034 chr5 70834892 70834892 1 + C A rs35131626 70834886 + 70834866 70834906 41 TAGGAAATGACCACAAGTGAACATATCCAAGATGAACCAGG TAGGAAATGACCACAAGTGAACATATACAAGATGAACCAGG < 41bp 1 0.219705720394383 1 0.589574158191681 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70834886 chr5:70834892 synonymous SNV . 0 hm6A_associated_SNPs_7383 0 1 1 3 70834873 70834893 mRNA hsa-miR-190b BDP1 miRanda miRanda
14034 chr5 70862162 70862162 1 + A C rs142086612 70862154 + 70862134 70862174 41 CTTGGATCTTTAAGCACGGAACATAATCATGATGTTAAAAA CTTGGATCTTTAAGCACGGAACATAATCCTGATGTTAAAAA < 41bp 1 0.351205850988513 1 0.530269384384155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 BDP1 ENSG00000145734 UTR3 Human protein_coding chr5:70862154 chr5:70862162 . . 0 hm6A_associated_SNPs_7385 0 0 0 1 70862144 70862166 mRNA hsa-miR-433 BDP1 miRanda miRanda
14034 chr5 70862631 70862631 1 + G T rs112409584 70862632 + 70862612 70862652 41 CCTAAAAGTTAAAACTGTTGACTGTATTATGTAATGATCAG CCTAAAAGTTAAAACTGTTTACTGTATTATGTAATGATCAG Direct Loss 1 0.0844070675981449 1 0.413474321365356 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 20 BDP1 ENSG00000145734 UTR3 Human protein_coding chr5:70862632 chr5:70862631 . . 0 hm6A_associated_SNPs_7386 0 0 1 2 70862614 70862634 mRNA hsa-miR-505 BDP1 miRanda miRanda
14034 chr5 70862631 70862631 1 + G T rs112409584 70862632 + 70862612 70862652 41 CCTAAAAGTTAAAACTGTTGACTGTATTATGTAATGATCAG CCTAAAAGTTAAAACTGTTTACTGTATTATGTAATGATCAG Direct Loss 1 0.0844070675981449 1 0.413474321365356 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 20 BDP1 ENSG00000145734 UTR3 Human protein_coding chr5:70862632 chr5:70862631 . . 0 hm6A_associated_SNPs_7386 0 0 1 2 70862609 70862633 mRNA hsa-miR-421 BDP1 miRanda miRanda
14034 chr5 70953264 70953264 1 + T A rs150412501 70953275 + 70953255 70953295 41 ATTATTATTTTTTTTTTGAGACAGGGTGTTTCTCTGTTGCC ATTATTATTATTTTTTTGAGACAGGGTGTTTCTCTGTTGCC < 41bp 1 0.209317546896818 1 0.00164246559143066 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 MCCC2 ENSG00000131844 UTR3 Human protein_coding chr5:70953275 chr5:70953264 . . 0 hm6A_associated_SNPs_7389 1 0 1 3 70953262 70953282 mRNA hsa-miR-10a MCCC2 miRanda miRanda
14034 chr5 70953264 70953264 1 + T A rs150412501 70953275 + 70953255 70953295 41 ATTATTATTTTTTTTTTGAGACAGGGTGTTTCTCTGTTGCC ATTATTATTATTTTTTTGAGACAGGGTGTTTCTCTGTTGCC < 41bp 1 0.209317546896818 1 0.00164246559143066 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 MCCC2 ENSG00000131844 UTR3 Human protein_coding chr5:70953275 chr5:70953264 . . 0 hm6A_associated_SNPs_7389 1 0 1 3 70953257 70953282 mRNA hsa-miR-10b MCCC2 miRanda miRanda
14034 chr5 70953264 70953264 1 + T A rs150412501 70953275 + 70953255 70953295 41 ATTATTATTTTTTTTTTGAGACAGGGTGTTTCTCTGTTGCC ATTATTATTATTTTTTTGAGACAGGGTGTTTCTCTGTTGCC < 41bp 1 0.209317546896818 1 0.00164246559143066 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 MCCC2 ENSG00000131844 UTR3 Human protein_coding chr5:70953275 chr5:70953264 . . 0 hm6A_associated_SNPs_7389 1 0 1 3 70953260 70953281 mRNA hsa-miR-339-5p MCCC2 miRanda miRanda
14034 chr5 70953280 70953280 1 + G T rs60069076 70953275 + 70953255 70953295 41 ATTATTATTTTTTTTTTGAGACAGGGTGTTTCTCTGTTGCC ATTATTATTTTTTTTTTGAGACAGGTTGTTTCTCTGTTGCC < 41bp 1 0.190327973845605 1 0.00328937172889709 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 26 MCCC2 ENSG00000131844 UTR3 Human protein_coding chr5:70953275 chr5:70953280 . . 0 hm6A_associated_SNPs_7390 1 0 1 3 70953262 70953282 mRNA hsa-miR-10a MCCC2 miRanda miRanda
14034 chr5 70953280 70953280 1 + G T rs60069076 70953275 + 70953255 70953295 41 ATTATTATTTTTTTTTTGAGACAGGGTGTTTCTCTGTTGCC ATTATTATTTTTTTTTTGAGACAGGTTGTTTCTCTGTTGCC < 41bp 1 0.190327973845605 1 0.00328937172889709 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 26 MCCC2 ENSG00000131844 UTR3 Human protein_coding chr5:70953275 chr5:70953280 . . 0 hm6A_associated_SNPs_7390 1 0 1 3 70953257 70953282 mRNA hsa-miR-10b MCCC2 miRanda miRanda
14034 chr5 70953280 70953280 1 + G T rs60069076 70953275 + 70953255 70953295 41 ATTATTATTTTTTTTTTGAGACAGGGTGTTTCTCTGTTGCC ATTATTATTTTTTTTTTGAGACAGGTTGTTTCTCTGTTGCC < 41bp 1 0.190327973845605 1 0.00328937172889709 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 26 MCCC2 ENSG00000131844 UTR3 Human protein_coding chr5:70953275 chr5:70953280 . . 0 hm6A_associated_SNPs_7390 1 0 1 3 70953260 70953281 mRNA hsa-miR-339-5p MCCC2 miRanda miRanda
14034 chr5 71502115 71502115 1 + G A rs112742907 71502111 + 71502091 71502131 41 GATTATAGATACTTAAAGGAACACGTGGGTGAGCGTGTGTG GATTATAGATACTTAAAGGAACACATGGGTGAGCGTGTGTG < 41bp 1 0.20952752685767 1 0.118755787611008 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 MAP1B ENSG00000131711 UTR3 Human protein_coding chr5:71502111 chr5:71502115 . . 0 hm6A_associated_SNPs_7402 0 0 1 2 71502093 71502119 mRNA hsa-miR-199a-5p MAP1B miRanda miRanda
14034 chr5 71502115 71502115 1 + G A rs112742907 71502111 + 71502091 71502131 41 GATTATAGATACTTAAAGGAACACGTGGGTGAGCGTGTGTG GATTATAGATACTTAAAGGAACACATGGGTGAGCGTGTGTG < 41bp 1 0.20952752685767 1 0.118755787611008 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 MAP1B ENSG00000131711 UTR3 Human protein_coding chr5:71502111 chr5:71502115 . . 0 hm6A_associated_SNPs_7402 0 0 1 2 71502093 71502119 mRNA hsa-miR-199b-5p MAP1B miRanda miRanda
14034 chr5 72205271 72205271 1 + A T rs151199361 72205256 + 72205236 72205276 41 GGCATATCAAACTAAAGATGACATCTTAATTTTGCATTGAA GGCATATCAAACTAAAGATGACATCTTAATTTTGCTTTGAA < 41bp 1 0.574169526740856 1 0.0161744058132172 experiment 0.851660946518287 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72205256 chr5:72205271 . . 0 hm6A_associated_SNPs_7408 0 0 1 2 72205268 72205289 mRNA hsa-miR-221 TNPO1 miRanda miRanda
14034 chr5 72205271 72205271 1 + A T rs151199361 72205256 + 72205236 72205276 41 GGCATATCAAACTAAAGATGACATCTTAATTTTGCATTGAA GGCATATCAAACTAAAGATGACATCTTAATTTTGCTTTGAA < 41bp 1 0.574169526740856 1 0.0161744058132172 experiment 0.851660946518287 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72205256 chr5:72205271 . . 0 hm6A_associated_SNPs_7408 0 0 1 2 72205267 72205289 mRNA hsa-miR-222 TNPO1 miRanda miRanda
14034 chr5 72205271 72205271 1 + A T rs151199361 72205276 + 72205256 72205296 41 ACATCTTAATTTTGCATTGAACATTAATGTAGCGGATATAA ACATCTTAATTTTGCTTTGAACATTAATGTAGCGGATATAA < 41bp 1 0.556494284638678 1 0.0196339190006256 experiment 0.887011430722643 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72205276 chr5:72205271 . . 0 hm6A_associated_SNPs_7409 0 0 1 2 72205268 72205289 mRNA hsa-miR-221 TNPO1 miRanda miRanda
14034 chr5 72205271 72205271 1 + A T rs151199361 72205276 + 72205256 72205296 41 ACATCTTAATTTTGCATTGAACATTAATGTAGCGGATATAA ACATCTTAATTTTGCTTTGAACATTAATGTAGCGGATATAA < 41bp 1 0.556494284638678 1 0.0196339190006256 experiment 0.887011430722643 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72205276 chr5:72205271 . . 0 hm6A_associated_SNPs_7409 0 0 1 2 72205267 72205289 mRNA hsa-miR-222 TNPO1 miRanda miRanda
14034 chr5 72205289 72205289 1 + G A rs577116313 72205276 + 72205256 72205296 41 ACATCTTAATTTTGCATTGAACATTAATGTAGCGGATATAA ACATCTTAATTTTGCATTGAACATTAATGTAGCAGATATAA < 41bp 1 0.53935273869918 1 0.0170832574367523 experiment 0.92129452260164 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72205276 chr5:72205289 . . 0 hm6A_associated_SNPs_7410 0 0 1 2 72205268 72205289 mRNA hsa-miR-221 TNPO1 miRanda miRanda
14034 chr5 72205289 72205289 1 + G A rs577116313 72205276 + 72205256 72205296 41 ACATCTTAATTTTGCATTGAACATTAATGTAGCGGATATAA ACATCTTAATTTTGCATTGAACATTAATGTAGCAGATATAA < 41bp 1 0.53935273869918 1 0.0170832574367523 experiment 0.92129452260164 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72205276 chr5:72205289 . . 0 hm6A_associated_SNPs_7410 0 0 1 2 72205267 72205289 mRNA hsa-miR-222 TNPO1 miRanda miRanda
14034 chr5 72209662 72209662 1 + A G rs114467328 72209679 + 72209659 72209699 41 TTTATGGAGACAATAATTAGACAATACTGTATAATTAGTTT TTTGTGGAGACAATAATTAGACAATACTGTATAATTAGTTT < 41bp 1 0.26999250954343 1 0.0654482543468475 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 4 TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72209679 chr5:72209662 . . 0 hm6A_associated_SNPs_7412 0 0 1 1 72209647 72209674 mRNA hsa-miR-137 TNPO1 miRanda miRanda
14034 chr5 72385003 72385003 1 + A G rs75030728 72385012 + 72384992 72385032 41 AAAAGTGTGTGAATTTTAAAACAAATTCTAAAAAAACTATA AAAAGTGTGTGGATTTTAAAACAAATTCTAAAAAAACTATA < 41bp 1 0.124230014557239 1 0.609983861446381 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 FCHO2 ENSG00000157107 UTR3 Human protein_coding chr5:72385012 chr5:72385003 . . 0 hm6A_associated_SNPs_7414 0 0 1 1 72384983 72385004 mRNA hsa-miR-377 FCHO2 miRanda miRanda
14034 chr5 72385895 72385895 1 + C T rs192032750 72385882 + 72385862 72385902 41 ATTTTATTATTGGAATTCAGACACTGTTCTTACCGTGTTTG ATTTTATTATTGGAATTCAGACACTGTTCTTACTGTGTTTG < 41bp 1 0.400935704802085 1 0.48625859618187 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 FCHO2 ENSG00000157107 UTR3 Human protein_coding chr5:72385882 chr5:72385895 . . 0 hm6A_associated_SNPs_7415 0 0 0 1 72385884 72385905 mRNA hsa-miR-495 FCHO2 miRanda miRanda
14034 chr5 72386139 72386139 1 + A G rs1046064 72386143 + 72386123 72386163 41 TTGCTTATATATAGTGATAAACTTTGTAGCTGCCTCTTTAA TTGCTTATATATAGTGGTAAACTTTGTAGCTGCCTCTTTAA < 41bp 1 0.191392539261776 1 0.448166251182556 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 FCHO2 ENSG00000157107 UTR3 Human protein_coding chr5:72386143 chr5:72386139 . . 0 hm6A_associated_SNPs_7416 0 0 1 1 72386135 72386158 mRNA hsa-miR-28-5p FCHO2 miRanda miRanda
14034 chr5 72794334 72794334 1 + T C rs541360504 72794329 + 72794309 72794349 41 TCTCAGGTGGTCCACCCGAGACCCCTTGAGCACCAACCCTA TCTCAGGTGGTCCACCCGAGACCCCCTGAGCACCAACCCTA < 41bp 1 0.190680140666944 1 0.923746824264526 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 BTF3 ENSG00000145741 UTR5 Human protein_coding chr5:72794329 chr5:72794334 . . 0 hm6A_associated_SNPs_7418 0 0 1 1 72794325 72794349 mRNA hsa-miR-296-3p BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798757 72798780 mRNA hsa-miR-17 BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798758 72798780 mRNA hsa-miR-20a BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798758 72798780 mRNA hsa-miR-93 BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798757 72798780 mRNA hsa-miR-106a BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798760 72798780 mRNA hsa-miR-106b BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798767 72798789 mRNA hsa-miR-296-3p BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798757 72798780 mRNA hsa-miR-20b BTF3 miRanda miRanda
14034 chr5 72798776 72798776 1 + C T rs151143923 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATCCATTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.77774883754682 1 0.313155889511108 experiment 0.44450232490636 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798776 synonymous SNV . 0 hm6A_associated_SNPs_7420 0 0 1 8 72798759 72798780 mRNA hsa-miR-519d BTF3 miRanda miRanda
14034 chr5 72801092 72801092 1 + G A rs545142219 72801088 + 72801068 72801108 41 AGTCAACTTCTGAAGATAAAACCTGAAGAAGTTACTGGGAG AGTCAACTTCTGAAGATAAAACCTAAAGAAGTTACTGGGAG < 41bp 1 0.732741541120396 1 0.872354865074158 experiment 0.534516917759208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 BTF3 ENSG00000145741 UTR3 Human protein_coding chr5:72801088 chr5:72801092 . . 0 hm6A_associated_SNPs_7422 0 0 1 4 72801090 72801114 mRNA hsa-miR-16 BTF3 miRanda miRanda
14034 chr5 72801092 72801092 1 + G A rs545142219 72801088 + 72801068 72801108 41 AGTCAACTTCTGAAGATAAAACCTGAAGAAGTTACTGGGAG AGTCAACTTCTGAAGATAAAACCTAAAGAAGTTACTGGGAG < 41bp 1 0.732741541120396 1 0.872354865074158 experiment 0.534516917759208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 BTF3 ENSG00000145741 UTR3 Human protein_coding chr5:72801088 chr5:72801092 . . 0 hm6A_associated_SNPs_7422 0 0 1 4 72801088 72801109 mRNA hsa-miR-150 BTF3 miRanda miRanda
14034 chr5 72801092 72801092 1 + G A rs545142219 72801088 + 72801068 72801108 41 AGTCAACTTCTGAAGATAAAACCTGAAGAAGTTACTGGGAG AGTCAACTTCTGAAGATAAAACCTAAAGAAGTTACTGGGAG < 41bp 1 0.732741541120396 1 0.872354865074158 experiment 0.534516917759208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 BTF3 ENSG00000145741 UTR3 Human protein_coding chr5:72801088 chr5:72801092 . . 0 hm6A_associated_SNPs_7422 0 0 1 4 72801092 72801114 mRNA hsa-miR-195 BTF3 miRanda miRanda
14034 chr5 72801092 72801092 1 + G A rs545142219 72801088 + 72801068 72801108 41 AGTCAACTTCTGAAGATAAAACCTGAAGAAGTTACTGGGAG AGTCAACTTCTGAAGATAAAACCTAAAGAAGTTACTGGGAG < 41bp 1 0.732741541120396 1 0.872354865074158 experiment 0.534516917759208 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 BTF3 ENSG00000145741 UTR3 Human protein_coding chr5:72801088 chr5:72801092 . . 0 hm6A_associated_SNPs_7422 0 0 1 4 72801092 72801114 mRNA hsa-miR-503 BTF3 miRanda miRanda
14034 chr5 73992881 73992881 1 + A G rs10805890 73992895 + 73992875 73992915 41 ATTTTGATTGATACATCCAGACATTATCTGCCAGTTAAGAT ATTTTGGTTGATACATCCAGACATTATCTGCCAGTTAAGAT < 41bp 1 0.613411283021434 1 0.0832239091396332 experiment 0.773177433957132 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 HEXB ENSG00000049860 CDS Human protein_coding chr5:73992895 chr5:73992881 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_7424 3 0 0 1 73992880 73992903 mRNA hsa-miR-190 HEXB miRanda miRanda
14034 chr5 74656175 74656175 1 + G A rs5909 74656186 + 74656166 74656206 41 GAATAGCCCGACAGTTCTGAACTGGAACATGGGCATTGGGT GAATAGCCCAACAGTTCTGAACTGGAACATGGGCATTGGGT < 41bp 1 0.793668539130103 1 0.984031200408936 experiment 0.412662921739793 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 HMGCR ENSG00000113161 UTR3 Human protein_coding chr5:74656186 chr5:74656175 . . 0 hm6A_associated_SNPs_7428 0 0 1 1 74656174 74656192 mRNA hsa-miR-145 HMGCR miRanda miRanda
14034 chr5 74656941 74656941 1 + G T rs147706448 74656922 + 74656902 74656942 41 GTTTGTCTGGATTGGCTATAACATGTCTTTCAGCATTAGGC GTTTGTCTGGATTGGCTATAACATGTCTTTCAGCATTAGTC < 41bp 1 0.306305068682482 1 0.503812313079834 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 40 HMGCR ENSG00000113161 UTR3 Human protein_coding chr5:74656922 chr5:74656941 . . 0 hm6A_associated_SNPs_7430 0 0 1 2 74656939 74656961 mRNA hsa-miR-10a HMGCR miRanda miRanda
14034 chr5 74656941 74656941 1 + G T rs147706448 74656922 + 74656902 74656942 41 GTTTGTCTGGATTGGCTATAACATGTCTTTCAGCATTAGGC GTTTGTCTGGATTGGCTATAACATGTCTTTCAGCATTAGTC < 41bp 1 0.306305068682482 1 0.503812313079834 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 40 HMGCR ENSG00000113161 UTR3 Human protein_coding chr5:74656922 chr5:74656941 . . 0 hm6A_associated_SNPs_7430 0 0 1 2 74656939 74656961 mRNA hsa-miR-10b HMGCR miRanda miRanda
14034 chr5 74656941 74656941 1 + G T rs147706448 74656952 + 74656932 74656972 41 CAGCATTAGGCTTTTAAGAAACACAGGGTTTTGTATTCTTT CAGCATTAGTCTTTTAAGAAACACAGGGTTTTGTATTCTTT < 41bp 1 0.307171362560825 1 0.486083388328552 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HMGCR ENSG00000113161 UTR3 Human protein_coding chr5:74656952 chr5:74656941 . . 0 hm6A_associated_SNPs_7431 0 0 1 2 74656939 74656961 mRNA hsa-miR-10a HMGCR miRanda miRanda
14034 chr5 74656941 74656941 1 + G T rs147706448 74656952 + 74656932 74656972 41 CAGCATTAGGCTTTTAAGAAACACAGGGTTTTGTATTCTTT CAGCATTAGTCTTTTAAGAAACACAGGGTTTTGTATTCTTT < 41bp 1 0.307171362560825 1 0.486083388328552 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HMGCR ENSG00000113161 UTR3 Human protein_coding chr5:74656952 chr5:74656941 . . 0 hm6A_associated_SNPs_7431 0 0 1 2 74656939 74656961 mRNA hsa-miR-10b HMGCR miRanda miRanda
14034 chr5 74657028 74657028 1 + A T rs192298408 74657015 + 74656995 74657035 41 ATGTTGCTTAGATGAGGGTGACTGTCAAGTACAAGCAAGAC ATGTTGCTTAGATGAGGGTGACTGTCAAGTACATGCAAGAC < 41bp 1 0.201684210273901 1 0.84302294254303 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 HMGCR ENSG00000113161 UTR3 Human protein_coding chr5:74657015 chr5:74657028 . . 0 hm6A_associated_SNPs_7432 0 0 1 1 74657016 74657036 mRNA hsa-miR-431 HMGCR miRanda miRanda
14034 chr5 76029389 76029389 1 + C A rs151014270 76029407 + 76029387 76029427 41 TTCTATTAGTCCCCACCCAAACTTTATTGATTCACCTCCTA TTATATTAGTCCCCACCCAAACTTTATTGATTCACCTCCTA < 41bp 1 0.440663239088807 1 0.732111155986786 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 F2R ENSG00000181104 UTR3 Human protein_coding chr5:76029407 chr5:76029389 . . 0 hm6A_associated_SNPs_7446 0 0 1 1 76029382 76029403 mRNA hsa-miR-491-5p F2R miRanda miRanda
14034 chr5 76030795 76030795 1 + A T rs17568523 76030793 + 76030773 76030813 41 AACAGAAGAAAATAGAATTGACATTGAAATCTAGGAAAATT AACAGAAGAAAATAGAATTGACTTTGAAATCTAGGAAAATT < 41bp 1 0.111305698715537 1 0.0440732538700104 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 F2R ENSG00000181104 UTR3 Human protein_coding chr5:76030793 chr5:76030795 . . 0 hm6A_associated_SNPs_7450 0 0 1 1 76030791 76030810 mRNA hsa-miR-384 F2R miRanda miRanda
14034 chr5 76030796 76030796 1 + T C rs1801719 76030793 + 76030773 76030813 41 AACAGAAGAAAATAGAATTGACATTGAAATCTAGGAAAATT AACAGAAGAAAATAGAATTGACACTGAAATCTAGGAAAATT < 41bp 1 0.160771222708379 1 0.0107180178165436 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 F2R ENSG00000181104 UTR3 Human protein_coding chr5:76030793 chr5:76030796 . . 0 hm6A_associated_SNPs_7451 0 0 1 1 76030791 76030810 mRNA hsa-miR-384 F2R miRanda miRanda
14034 chr5 76130781 76130781 1 + G A rs146194119 76130797 + 76130777 76130817 41 AAATGCAATCAGGATTTTAAACATGTAAATACAAATTTTGT AAATACAATCAGGATTTTAAACATGTAAATACAAATTTTGT < 41bp 1 0.115629245921648 1 0.0316958725452423 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 F2RL1 ENSG00000164251 UTR3 Human protein_coding chr5:76130797 chr5:76130781 . . 0 hm6A_associated_SNPs_7458 0 0 1 2 76130764 76130784 mRNA hsa-miR-33a F2RL1 miRanda miRanda
14034 chr5 76130781 76130781 1 + G A rs146194119 76130797 + 76130777 76130817 41 AAATGCAATCAGGATTTTAAACATGTAAATACAAATTTTGT AAATACAATCAGGATTTTAAACATGTAAATACAAATTTTGT < 41bp 1 0.115629245921648 1 0.0316958725452423 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 F2RL1 ENSG00000164251 UTR3 Human protein_coding chr5:76130797 chr5:76130781 . . 0 hm6A_associated_SNPs_7458 0 0 1 2 76130765 76130784 mRNA hsa-miR-33b F2RL1 miRanda miRanda
14034 chr5 76131064 76131064 1 + T C rs573164812 76131075 + 76131055 76131095 41 ATACAACGATTGTATTTGTGACTTTTAAAAATAATTATTTT ATACAACGACTGTATTTGTGACTTTTAAAAATAATTATTTT < 41bp 1 0.0550102475902301 1 0.773668527603149 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 10 F2RL1 ENSG00000164251 UTR3 Human protein_coding chr5:76131075 chr5:76131064 . . 0 hm6A_associated_SNPs_7459 0 0 1 1 76131059 76131079 mRNA hsa-miR-224 F2RL1 miRanda miRanda
14034 chr5 76131124 76131124 1 + A T rs575690460 76131119 + 76131099 76131139 41 GTGTAATTGATTTATAAATAACAAAATTTTTTTTACAACTT GTGTAATTGATTTATAAATAACAAATTTTTTTTTACAACTT < 41bp 1 0.100575986741904 1 0.0520096719264984 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 F2RL1 ENSG00000164251 UTR3 Human protein_coding chr5:76131119 chr5:76131124 . . 0 hm6A_associated_SNPs_7460 0 0 1 2 76131121 76131139 mRNA hsa-miR-382 F2RL1 miRanda miRanda
14034 chr5 76131124 76131124 1 + A T rs575690460 76131119 + 76131099 76131139 41 GTGTAATTGATTTATAAATAACAAAATTTTTTTTACAACTT GTGTAATTGATTTATAAATAACAAATTTTTTTTTACAACTT < 41bp 1 0.100575986741904 1 0.0520096719264984 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 F2RL1 ENSG00000164251 UTR3 Human protein_coding chr5:76131119 chr5:76131124 . . 0 hm6A_associated_SNPs_7460 0 0 1 2 76131104 76131127 mRNA hsa-miR-590-3p F2RL1 miRanda miRanda
14034 chr5 76131133 76131133 1 + A G rs143476361 76131119 + 76131099 76131139 41 GTGTAATTGATTTATAAATAACAAAATTTTTTTTACAACTT GTGTAATTGATTTATAAATAACAAAATTTTTTTTGCAACTT < 41bp 1 0.0964787803949553 1 0.0524559319019318 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 F2RL1 ENSG00000164251 UTR3 Human protein_coding chr5:76131119 chr5:76131133 . . 0 hm6A_associated_SNPs_7461 0 0 1 1 76131121 76131139 mRNA hsa-miR-382 F2RL1 miRanda miRanda
14034 chr5 76331419 76331419 1 + G A rs138001052 76331421 + 76331401 76331441 41 CTTCCAAATAAAGTGACTGAACTGTCAGATCAACAAGATCA CTTCCAAATAAAGTGACTAAACTGTCAGATCAACAAGATCA < 41bp 1 0.323439514080126 1 0.989929795265198 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331421 chr5:76331419 nonsynonymous SNV 0.144 0 hm6A_associated_SNPs_7462 0 0 1 1 76331402 76331426 mRNA hsa-miR-181b AGGF1 miRanda miRanda
14034 chr5 76359463 76359463 1 + G A rs73125847 76359457 + 76359437 76359477 41 TAAGATGCACAACAAAAGAAACATCAGAAGTTTATAAAAAT TAAGATGCACAACAAAAGAAACATCAAAAGTTTATAAAAAT < 41bp 1 0.345654562352043 1 0.22130823135376 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 AGGF1 ENSG00000164252 UTR3 Human protein_coding chr5:76359457 chr5:76359463 . . 0 hm6A_associated_SNPs_7470 0 0 1 1 76359452 76359473 mRNA hsa-miR-340 AGGF1 miRanda miRanda
14034 chr5 76359473 76359473 1 + A C rs183509809 76359457 + 76359437 76359477 41 TAAGATGCACAACAAAAGAAACATCAGAAGTTTATAAAAAT TAAGATGCACAACAAAAGAAACATCAGAAGTTTATACAAAT < 41bp 1 0.347313033379068 1 0.337520837783813 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 AGGF1 ENSG00000164252 UTR3 Human protein_coding chr5:76359457 chr5:76359473 . . 0 hm6A_associated_SNPs_7471 0 0 1 2 76359452 76359473 mRNA hsa-miR-340 AGGF1 miRanda miRanda
14034 chr5 76359473 76359473 1 + A C rs183509809 76359457 + 76359437 76359477 41 TAAGATGCACAACAAAAGAAACATCAGAAGTTTATAAAAAT TAAGATGCACAACAAAAGAAACATCAGAAGTTTATACAAAT < 41bp 1 0.347313033379068 1 0.337520837783813 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 AGGF1 ENSG00000164252 UTR3 Human protein_coding chr5:76359457 chr5:76359473 . . 0 hm6A_associated_SNPs_7471 0 0 1 2 76359473 76359495 mRNA hsa-miR-448 AGGF1 miRanda miRanda
14034 chr5 78981251 78981251 1 + A T rs146287903 78981254 + 78981234 78981274 41 AGATTGCATATTTTATTATGACATTTCCTAATAAACCCCTT AGATTGCATATTTTATTTTGACATTTCCTAATAAACCCCTT < 41bp 1 0.757878870035601 1 0.0477169752120972 experiment 0.484242259928799 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 PAPD4 ENSG00000164329 UTR3 Human protein_coding chr5:78981254 chr5:78981251 . . 0 hm6A_associated_SNPs_7486 0 0 1 3 78981240 78981262 mRNA hsa-miR-203 PAPD4 miRanda miRanda
14034 chr5 78981251 78981251 1 + A T rs146287903 78981254 + 78981234 78981274 41 AGATTGCATATTTTATTATGACATTTCCTAATAAACCCCTT AGATTGCATATTTTATTTTGACATTTCCTAATAAACCCCTT < 41bp 1 0.757878870035601 1 0.0477169752120972 experiment 0.484242259928799 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 PAPD4 ENSG00000164329 UTR3 Human protein_coding chr5:78981254 chr5:78981251 . . 0 hm6A_associated_SNPs_7486 0 0 1 3 78981234 78981254 mRNA hsa-miR-374a PAPD4 miRanda miRanda
14034 chr5 78981251 78981251 1 + A T rs146287903 78981254 + 78981234 78981274 41 AGATTGCATATTTTATTATGACATTTCCTAATAAACCCCTT AGATTGCATATTTTATTTTGACATTTCCTAATAAACCCCTT < 41bp 1 0.757878870035601 1 0.0477169752120972 experiment 0.484242259928799 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 PAPD4 ENSG00000164329 UTR3 Human protein_coding chr5:78981254 chr5:78981251 . . 0 hm6A_associated_SNPs_7486 0 0 1 3 78981233 78981254 mRNA hsa-miR-374b PAPD4 miRanda miRanda
14034 chr5 78981925 78981925 1 + A G rs532090259 78981923 + 78981903 78981943 41 CCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGA CCTGCTCTGTTTTCTCTGTGACGTGAAGCAACAGAAACTGA Direct Loss 1 0.393187063260423 1 0.793206810951233 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 PAPD4 ENSG00000164329 UTR3 Human protein_coding chr5:78981923 chr5:78981925 . . 0 hm6A_associated_SNPs_7487 0 0 1 1 78981915 78981936 mRNA hsa-miR-218 PAPD4 miRanda miRanda
14034 chr5 80171871 80171871 1 + T G rs371112264 80171880 + 80171860 80171900 41 CCTAACTTTTCTACGTATAAACACTCTTGAATAGACTTCCA CCTAACTTTTCGACGTATAAACACTCTTGAATAGACTTCCA < 41bp 1 0.271070334936155 1 0.754300892353058 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 MSH3 ENSG00000113318 UTR3 Human protein_coding chr5:80171880 chr5:80171871 . . 0 hm6A_associated_SNPs_7498 0 0 1 1 80171867 80171889 mRNA hsa-miR-335 MSH3 miRanda miRanda
14034 chr5 80608781 80608781 1 + T C rs528572970 80608769 + 80608749 80608789 41 TAGTTGTATACCTGATTGTAACAATCATCTTTTATAAAAGC TAGTTGTATACCTGATTGTAACAATCATCTTTCATAAAAGC < 41bp 1 0.325330128995114 1 0.275473207235336 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 RNU5D-1;RNU5E-1 ENSG00000131732 UTR3 Human protein_coding chr5:80608769 chr5:80608781 . . 0 hm6A_associated_SNPs_7500 0 0 1 5 80608775 80608795 mRNA hsa-miR-129-5p ZCCHC9 miRanda miRanda
14034 chr5 80608781 80608781 1 + T C rs528572970 80608769 + 80608749 80608789 41 TAGTTGTATACCTGATTGTAACAATCATCTTTTATAAAAGC TAGTTGTATACCTGATTGTAACAATCATCTTTCATAAAAGC < 41bp 1 0.325330128995114 1 0.275473207235336 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 RNU5D-1;RNU5E-1 ENSG00000131732 UTR3 Human protein_coding chr5:80608769 chr5:80608781 . . 0 hm6A_associated_SNPs_7500 0 0 1 5 80608780 80608801 mRNA hsa-miR-153 ZCCHC9 miRanda miRanda
14034 chr5 80608781 80608781 1 + T C rs528572970 80608769 + 80608749 80608789 41 TAGTTGTATACCTGATTGTAACAATCATCTTTTATAAAAGC TAGTTGTATACCTGATTGTAACAATCATCTTTCATAAAAGC < 41bp 1 0.325330128995114 1 0.275473207235336 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 RNU5D-1;RNU5E-1 ENSG00000131732 UTR3 Human protein_coding chr5:80608769 chr5:80608781 . . 0 hm6A_associated_SNPs_7500 0 0 1 5 80608765 80608785 mRNA hsa-miR-340 ZCCHC9 miRanda miRanda
14034 chr5 80608781 80608781 1 + T C rs528572970 80608769 + 80608749 80608789 41 TAGTTGTATACCTGATTGTAACAATCATCTTTTATAAAAGC TAGTTGTATACCTGATTGTAACAATCATCTTTCATAAAAGC < 41bp 1 0.325330128995114 1 0.275473207235336 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 RNU5D-1;RNU5E-1 ENSG00000131732 UTR3 Human protein_coding chr5:80608769 chr5:80608781 . . 0 hm6A_associated_SNPs_7500 0 0 1 5 80608780 80608801 mRNA hsa-miR-448 ZCCHC9 miRanda miRanda
14034 chr5 80608781 80608781 1 + T C rs528572970 80608769 + 80608749 80608789 41 TAGTTGTATACCTGATTGTAACAATCATCTTTTATAAAAGC TAGTTGTATACCTGATTGTAACAATCATCTTTCATAAAAGC < 41bp 1 0.325330128995114 1 0.275473207235336 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 RNU5D-1;RNU5E-1 ENSG00000131732 UTR3 Human protein_coding chr5:80608769 chr5:80608781 . . 0 hm6A_associated_SNPs_7500 0 0 1 5 80608774 80608796 mRNA hsa-miR-590-3p ZCCHC9 miRanda miRanda
14034 chr5 82876925 82876925 1 + A G rs532790573 82876910 + 82876890 82876930 41 ACTAAGGACTCCAATGTCGAACTCTTCTTTGCTGCATTCCT ACTAAGGACTCCAATGTCGAACTCTTCTTTGCTGCGTTCCT < 41bp 1 0.193736939227572 1 0.970080077648163 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 36 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82876910 chr5:82876925 . . 0 hm6A_associated_SNPs_7530 0 0 1 2 82876903 82876925 mRNA hsa-miR-103 VCAN miRanda miRanda
14034 chr5 82876925 82876925 1 + A G rs532790573 82876910 + 82876890 82876930 41 ACTAAGGACTCCAATGTCGAACTCTTCTTTGCTGCATTCCT ACTAAGGACTCCAATGTCGAACTCTTCTTTGCTGCGTTCCT < 41bp 1 0.193736939227572 1 0.970080077648163 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 36 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82876910 chr5:82876925 . . 0 hm6A_associated_SNPs_7530 0 0 1 2 82876903 82876925 mRNA hsa-miR-107 VCAN miRanda miRanda
14034 chr5 82877069 82877069 1 + C A rs111455323 82877049 + 82877029 82877069 41 ACTTTTTAATGGCTTTCATAACACTAACTCATAAGGTTACC ACTTTTTAATGGCTTTCATAACACTAACTCATAAGGTTACA < 41bp 1 0.270185182055905 1 0.290172129869461 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82877049 chr5:82877069 . . 0 hm6A_associated_SNPs_7533 2 0 1 3 82877058 82877080 mRNA hsa-miR-33a VCAN miRanda miRanda
14034 chr5 82877069 82877069 1 + C A rs111455323 82877049 + 82877029 82877069 41 ACTTTTTAATGGCTTTCATAACACTAACTCATAAGGTTACC ACTTTTTAATGGCTTTCATAACACTAACTCATAAGGTTACA < 41bp 1 0.270185182055905 1 0.290172129869461 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82877049 chr5:82877069 . . 0 hm6A_associated_SNPs_7533 2 0 1 3 82877064 82877085 mRNA hsa-miR-203 VCAN miRanda miRanda
14034 chr5 82877069 82877069 1 + C A rs111455323 82877049 + 82877029 82877069 41 ACTTTTTAATGGCTTTCATAACACTAACTCATAAGGTTACC ACTTTTTAATGGCTTTCATAACACTAACTCATAAGGTTACA < 41bp 1 0.270185182055905 1 0.290172129869461 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82877049 chr5:82877069 . . 0 hm6A_associated_SNPs_7533 2 0 1 3 82877059 82877080 mRNA hsa-miR-33b VCAN miRanda miRanda
14034 chr5 82877069 82877069 1 + C A rs111455323 82877055 + 82877035 82877075 41 TAATGGCTTTCATAACACTAACTCATAAGGTTACCGATCAA TAATGGCTTTCATAACACTAACTCATAAGGTTACAGATCAA < 41bp 1 0.232085065309477 1 0.565075755119324 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82877055 chr5:82877069 . . 0 hm6A_associated_SNPs_7534 2 0 1 3 82877058 82877080 mRNA hsa-miR-33a VCAN miRanda miRanda
14034 chr5 82877069 82877069 1 + C A rs111455323 82877055 + 82877035 82877075 41 TAATGGCTTTCATAACACTAACTCATAAGGTTACCGATCAA TAATGGCTTTCATAACACTAACTCATAAGGTTACAGATCAA < 41bp 1 0.232085065309477 1 0.565075755119324 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82877055 chr5:82877069 . . 0 hm6A_associated_SNPs_7534 2 0 1 3 82877064 82877085 mRNA hsa-miR-203 VCAN miRanda miRanda
14034 chr5 82877069 82877069 1 + C A rs111455323 82877055 + 82877035 82877075 41 TAATGGCTTTCATAACACTAACTCATAAGGTTACCGATCAA TAATGGCTTTCATAACACTAACTCATAAGGTTACAGATCAA < 41bp 1 0.232085065309477 1 0.565075755119324 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 VCAN ENSG00000249835 ncRNA_exonic Human antisense chr5:82877055 chr5:82877069 . . 0 hm6A_associated_SNPs_7534 2 0 1 3 82877059 82877080 mRNA hsa-miR-33b VCAN miRanda miRanda
14034 chr5 82877682 82877682 1 + A G rs11726 82877685 + 82877665 82877705 41 AACCTGTAATGGAAAGTAAGACTCCTTCCCTAATTTCAGTT AACCTGTAATGGAAAGTGAGACTCCTTCCCTAATTTCAGTT < 41bp 1 0.0832305660165276 1 0.162310302257538 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 VCAN ENSG00000038427 UTR3 Human protein_coding chr5:82877685 chr5:82877682 . . 0 hm6A_associated_SNPs_7535 2 0 1 2 82877669 82877691 mRNA hsa-miR-28-5p VCAN miRanda miRanda
14034 chr5 82877682 82877682 1 + A G rs11726 82877685 + 82877665 82877705 41 AACCTGTAATGGAAAGTAAGACTCCTTCCCTAATTTCAGTT AACCTGTAATGGAAAGTGAGACTCCTTCCCTAATTTCAGTT < 41bp 1 0.0832305660165276 1 0.162310302257538 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 VCAN ENSG00000038427 UTR3 Human protein_coding chr5:82877685 chr5:82877682 . . 0 hm6A_associated_SNPs_7535 2 0 1 2 82877668 82877691 mRNA hsa-miR-708 VCAN miRanda miRanda
14034 chr5 82877689 82877689 1 + C T rs15071 82877685 + 82877665 82877705 41 AACCTGTAATGGAAAGTAAGACTCCTTCCCTAATTTCAGTT AACCTGTAATGGAAAGTAAGACTCTTTCCCTAATTTCAGTT < 41bp 1 0.104529212481491 1 0.355720996856689 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 VCAN ENSG00000038427 UTR3 Human protein_coding chr5:82877685 chr5:82877689 . . 0 hm6A_associated_SNPs_7536 2 0 1 2 82877669 82877691 mRNA hsa-miR-28-5p VCAN miRanda miRanda
14034 chr5 82877689 82877689 1 + C T rs15071 82877685 + 82877665 82877705 41 AACCTGTAATGGAAAGTAAGACTCCTTCCCTAATTTCAGTT AACCTGTAATGGAAAGTAAGACTCTTTCCCTAATTTCAGTT < 41bp 1 0.104529212481491 1 0.355720996856689 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 VCAN ENSG00000038427 UTR3 Human protein_coding chr5:82877685 chr5:82877689 . . 0 hm6A_associated_SNPs_7536 2 0 1 2 82877668 82877691 mRNA hsa-miR-708 VCAN miRanda miRanda
14034 chr5 85915288 85915288 1 + G A rs142386563 85915281 + 85915261 85915301 41 TAAGACACCAACTGCTTAAAACATAAGGATGTTTCAGTTCC TAAGACACCAACTGCTTAAAACATAAGAATGTTTCAGTTCC < 41bp 1 0.660421880274944 1 0.0787603557109833 experiment 0.679156239450112 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 COX7C ENSG00000127184 UTR3 Human protein_coding chr5:85915281 chr5:85915288 . . 0 hm6A_associated_SNPs_7537 0 0 1 2 85915287 85915296 mRNA hsa-miR-494 COX7C miRanda miRanda
14034 chr5 85915288 85915288 1 + G A rs142386563 85915281 + 85915261 85915301 41 TAAGACACCAACTGCTTAAAACATAAGGATGTTTCAGTTCC TAAGACACCAACTGCTTAAAACATAAGAATGTTTCAGTTCC < 41bp 1 0.660421880274944 1 0.0787603557109833 experiment 0.679156239450112 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 COX7C ENSG00000127184 UTR3 Human protein_coding chr5:85915281 chr5:85915288 . . 0 hm6A_associated_SNPs_7537 0 0 1 2 85915287 85915304 mRNA hsa-miR-873 COX7C miRanda miRanda
14034 chr5 86686926 86686926 1 + C A rs554568547 86686931 + 86686911 86686951 41 CCACATGGAATCAATCTTTAACAACCTCTGAGCCTTGGTGT CCACATGGAATCAATATTTAACAACCTCTGAGCCTTGGTGT < 41bp 1 0.553718731465361 1 0.792009830474854 experiment 0.892562537069278 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 RASA1 ENSG00000145715 UTR3 Human protein_coding chr5:86686931 chr5:86686926 . . 0 hm6A_associated_SNPs_7541 0 0 1 1 86686924 86686945 mRNA hsa-miR-24 RASA1 miRanda miRanda
14034 chr5 86687075 86687075 1 + T C rs116868431 86687066 + 86687046 86687086 41 TGCTGTCTCTTAGAGAAAGAACTATGAAATCAACTGACAAG TGCTGTCTCTTAGAGAAAGAACTATGAAACCAACTGACAAG < 41bp 1 0.664365635301755 1 0.971076548099518 experiment 0.671268729396491 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 RASA1 ENSG00000145715 UTR3 Human protein_coding chr5:86687066 chr5:86687075 . . 0 hm6A_associated_SNPs_7542 2 0 1 1 86687063 86687084 mRNA hsa-miR-223 RASA1 miRanda miRanda
14034 chr5 94031085 94031085 1 + C G rs187730482 94031097 + 94031077 94031117 41 GTGGACTTCATAGCTTACTGACAGATAGTAATTTGATTTAT GTGGACTTGATAGCTTACTGACAGATAGTAATTTGATTTAT < 41bp 1 0.593305969523425 1 0.832711458206177 experiment 0.813388060953151 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 SLF1 ENSG00000133302 UTR3 Human protein_coding chr5:94031097 chr5:94031085 . . 0 hm6A_associated_SNPs_7548 0 0 1 1 94031064 94031085 mRNA hsa-miR-224 ANKRD32 miRanda miRanda
14034 chr5 96109610 96109610 1 + G A rs1057569 96109621 + 96109601 96109641 41 TGGCAGCGGGGCAAGCAAAAACAATAACACTGCTTATAAAT TGGCAGCGGAGCAAGCAAAAACAATAACACTGCTTATAAAT < 41bp 1 0.311091418381267 1 0.410639107227325 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 CAST ENSG00000153113 UTR3 Human protein_coding chr5:96109621 chr5:96109610 . . 0 hm6A_associated_SNPs_7570 0 0 1 1 96109602 96109622 mRNA hsa-miR-129-5p CAST miRanda miRanda
14034 chr5 96110211 96110211 1 + A C rs7063 96110201 + 96110181 96110221 41 TATCCACTTAGAGGCAAAGAACAATTTTTTATTATCAAAAA TATCCACTTAGAGGCAAAGAACAATTTTTTCTTATCAAAAA < 41bp 1 0.446372079017096 1 0.407316923141479 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 CAST;ERAP1 ENSG00000153113;ENSG00000164307 UTR3 Human other chr5:96110201 chr5:96110211 . . 0 hm6A_associated_SNPs_7572 0 0 1 2 96110196 96110217 mRNA hsa-miR-374a CAST miRanda miRanda
14034 chr5 96110211 96110211 1 + A C rs7063 96110201 + 96110181 96110221 41 TATCCACTTAGAGGCAAAGAACAATTTTTTATTATCAAAAA TATCCACTTAGAGGCAAAGAACAATTTTTTCTTATCAAAAA < 41bp 1 0.446372079017096 1 0.407316923141479 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 CAST;ERAP1 ENSG00000153113;ENSG00000164307 UTR3 Human other chr5:96110201 chr5:96110211 . . 0 hm6A_associated_SNPs_7572 0 0 1 2 96110196 96110217 mRNA hsa-miR-374b CAST miRanda miRanda
14034 chr5 96364473 96364473 1 + A G rs567323087 96364477 + 96364457 96364497 41 AATGCCAACCATCTACAAAAACAATGAGTAATTTTTCTACT AATGCCAACCATCTACGAAAACAATGAGTAATTTTTCTACT < 41bp 1 0.745080261048093 1 0.895170509815216 experiment 0.509839477903813 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|30867593;GSE121942;miCLIP;HepG2;Control 17 LNPEP ENSG00000113441 UTR3 Human protein_coding chr5:96364477 chr5:96364473 . . 0 hm6A_associated_SNPs_7573 0 0 1 1 96364458 96364478 mRNA hsa-miR-129-5p LNPEP miRanda miRanda
14034 chr5 98131743 98131743 1 + C T rs184595451 98131750 + 98131730 98131770 41 GTAATCGGTGTCCCTGTAAAACAATCCCCACAGATTACTTT GTAATCGGTGTCCTTGTAAAACAATCCCCACAGATTACTTT < 41bp 1 0.725272543740015 1 0.636745870113373 experiment 0.549454912519971 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 RGMB ENSG00000174136 UTR3 Human protein_coding chr5:98131750 chr5:98131743 . . 0 hm6A_associated_SNPs_7576 0 0 1 1 98131740 98131761 mRNA hsa-miR-491-5p RGMB miRanda miRanda
14034 chr5 109202723 109202723 1 + A G rs113591408 109202705 + 109202685 109202725 41 ATCCAGTTGAGGTGAACCTGACTTTCACATTTGGATTGAGA ATCCAGTTGAGGTGAACCTGACTTTCACATTTGGATTGGGA < 41bp 1 0.759010080324609 1 0.945253551006317 experiment 0.481979839350782 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 39 MAN2A1 ENSG00000112893 UTR3 Human protein_coding chr5:109202705 chr5:109202723 . . 0 hm6A_associated_SNPs_7593 0 0 1 1 109202710 109202729 mRNA hsa-miR-219-5p MAN2A1 miRanda miRanda
14034 chr5 109202725 109202725 1 + A G rs1047004 109202705 + 109202685 109202725 41 ATCCAGTTGAGGTGAACCTGACTTTCACATTTGGATTGAGA ATCCAGTTGAGGTGAACCTGACTTTCACATTTGGATTGAGG < 41bp 1 0.742655423070591 1 0.943176865577698 experiment 0.514689153858818 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 41 MAN2A1 ENSG00000112893 UTR3 Human protein_coding chr5:109202705 chr5:109202725 . . 0 hm6A_associated_SNPs_7594 0 0 1 1 109202710 109202729 mRNA hsa-miR-219-5p MAN2A1 miRanda miRanda
14034 chr5 109202895 109202895 1 + A G rs532578043 109202913 + 109202893 109202933 41 TCAAGATTCTTTTTTTTTAAACTTTCTCCCATGAACTACCA TCGAGATTCTTTTTTTTTAAACTTTCTCCCATGAACTACCA < 41bp 1 0.700972191156668 1 0.921867609024048 experiment 0.598055617686663 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 3 MAN2A1 ENSG00000112893 downstream Human protein_coding chr5:109202913 chr5:109202895 . . 0 hm6A_associated_SNPs_7595 0 0 1 1 109202884 109202905 mRNA hsa-miR-186 MAN2A1 miRanda miRanda
14034 chr5 110097749 110097749 1 + G A rs573304762 110097741 + 110097721 110097761 41 TAGCACTCATGCTGAAGTAAACATGATCGTAGGCAGAAGCA TAGCACTCATGCTGAAGTAAACATGATCATAGGCAGAAGCA < 41bp 1 0.443936721307783 1 0.0930384695529938 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110097741 chr5:110097749 . . 0 hm6A_associated_SNPs_7596 0 0 1 3 110097747 110097766 mRNA hsa-miR-129-5p SLC25A46 miRanda miRanda
14034 chr5 110097749 110097749 1 + G A rs573304762 110097741 + 110097721 110097761 41 TAGCACTCATGCTGAAGTAAACATGATCGTAGGCAGAAGCA TAGCACTCATGCTGAAGTAAACATGATCATAGGCAGAAGCA < 41bp 1 0.443936721307783 1 0.0930384695529938 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110097741 chr5:110097749 . . 0 hm6A_associated_SNPs_7596 0 0 1 3 110097727 110097749 mRNA hsa-miR-190 SLC25A46 miRanda miRanda
14034 chr5 110097749 110097749 1 + G A rs573304762 110097741 + 110097721 110097761 41 TAGCACTCATGCTGAAGTAAACATGATCGTAGGCAGAAGCA TAGCACTCATGCTGAAGTAAACATGATCATAGGCAGAAGCA < 41bp 1 0.443936721307783 1 0.0930384695529938 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110097741 chr5:110097749 . . 0 hm6A_associated_SNPs_7596 0 0 1 3 110097729 110097749 mRNA hsa-miR-190b SLC25A46 miRanda miRanda
14034 chr5 110098388 110098388 1 + T C rs116150958 110098373 + 110098353 110098393 41 GAGAATATAAAATAATCATGACAATTACTACTGTTTCCACA GAGAATATAAAATAATCATGACAATTACTACTGTTCCCACA < 41bp 1 0.510861235920542 1 0.111640572547913 experiment 0.978277528158915 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110098373 chr5:110098388 . . 0 hm6A_associated_SNPs_7597 0 0 1 2 110098373 110098395 mRNA hsa-miR-299-3p SLC25A46 miRanda miRanda
14034 chr5 110098388 110098388 1 + T C rs116150958 110098373 + 110098353 110098393 41 GAGAATATAAAATAATCATGACAATTACTACTGTTTCCACA GAGAATATAAAATAATCATGACAATTACTACTGTTCCCACA < 41bp 1 0.510861235920542 1 0.111640572547913 experiment 0.978277528158915 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110098373 chr5:110098388 . . 0 hm6A_associated_SNPs_7597 0 0 1 2 110098369 110098390 mRNA hsa-miR-494 SLC25A46 miRanda miRanda
14034 chr5 110098468 110098468 1 + T C rs575493674 110098461 + 110098441 110098481 41 AATGGCTTGTCTGAGAGGAAACAAAATTAAAATTCATCTGG AATGGCTTGTCTGAGAGGAAACAAAATCAAAATTCATCTGG < 41bp 1 0.276933808513602 1 0.027407705783844 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110098461 chr5:110098468 . . 0 hm6A_associated_SNPs_7598 0 0 1 2 110098461 110098481 mRNA hsa-miR-143 SLC25A46 miRanda miRanda
14034 chr5 110098468 110098468 1 + T C rs575493674 110098461 + 110098441 110098481 41 AATGGCTTGTCTGAGAGGAAACAAAATTAAAATTCATCTGG AATGGCTTGTCTGAGAGGAAACAAAATCAAAATTCATCTGG < 41bp 1 0.276933808513602 1 0.027407705783844 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110098461 chr5:110098468 . . 0 hm6A_associated_SNPs_7598 0 0 1 2 110098455 110098475 mRNA hsa-miR-590-3p SLC25A46 miRanda miRanda
14034 chr5 110463533 110463533 1 + C A rs189735907 110463536 + 110463516 110463556 41 AATTCCATAAATCCTTGCAAACAATTTTTAGCAATATTGTT AATTCCATAAATCCTTGAAAACAATTTTTAGCAATATTGTT < 41bp 1 0.247060773923156 1 0.0327560305595398 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 WDR36 ENSG00000134987 UTR3 Human protein_coding chr5:110463536 chr5:110463533 . . 0 hm6A_associated_SNPs_7601 1 0 0 1 110463531 110463552 mRNA hsa-miR-137 WDR36 miRanda miRanda
14034 chr5 110464140 110464140 1 + G C rs149151603 110464150 + 110464130 110464170 41 TGACAGAAATGTTAATCATGACTTAAGTTCTAATTTAAAAA TGACAGAAATCTTAATCATGACTTAAGTTCTAATTTAAAAA < 41bp 1 0.0546326746804477 1 0.252449929714203 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 WDR36 ENSG00000134987 UTR3 Human protein_coding chr5:110464150 chr5:110464140 . . 0 hm6A_associated_SNPs_7602 1 0 1 1 110464130 110464151 mRNA hsa-miR-433 WDR36 miRanda miRanda
14034 chr5 111497956 111497956 1 + G T rs190690244 111497973 + 111497953 111497993 41 TCTGTAAATACACATTTAAGACAGTGAGGATGTGAATAAAT TCTTTAAATACACATTTAAGACAGTGAGGATGTGAATAAAT < 41bp 1 0.145398815373013 1 0.670457184314728 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111497973 chr5:111497956 . . 0 hm6A_associated_SNPs_7608 0 0 1 1 111497949 111497968 lncRNA hsa-miR-511-3p EPB41L4A-AS1 miRanda starBase2
14034 chr5 111497957 111497957 1 + T C rs184182473 111497973 + 111497953 111497993 41 TCTGTAAATACACATTTAAGACAGTGAGGATGTGAATAAAT TCTGCAAATACACATTTAAGACAGTGAGGATGTGAATAAAT < 41bp 1 0.148749528084676 1 0.684899806976318 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111497973 chr5:111497957 . . 0 hm6A_associated_SNPs_7609 0 0 1 1 111497949 111497968 lncRNA hsa-miR-511-3p EPB41L4A-AS1 miRanda starBase2
14034 chr5 112180478 112180478 1 + G A rs114463799 112180489 + 112180469 112180509 41 AAAATCTGTGTAACTGTAAAACATTGAATGAAACTATTTTA AAAATCTGTATAACTGTAAAACATTGAATGAAACTATTTTA < 41bp 1 0.250887689871636 1 0.75196760892868 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 APC ENSG00000134982 UTR3 Human protein_coding chr5:112180489 chr5:112180478 . . 0 hm6A_associated_SNPs_7614 0 0 1 5 112180466 112180488 mRNA hsa-miR-139-5p APC miRanda miRanda
14034 chr5 112180478 112180478 1 + G A rs114463799 112180489 + 112180469 112180509 41 AAAATCTGTGTAACTGTAAAACATTGAATGAAACTATTTTA AAAATCTGTATAACTGTAAAACATTGAATGAAACTATTTTA < 41bp 1 0.250887689871636 1 0.75196760892868 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 APC ENSG00000134982 UTR3 Human protein_coding chr5:112180489 chr5:112180478 . . 0 hm6A_associated_SNPs_7614 0 0 1 5 112180477 112180500 mRNA hsa-miR-181a APC miRanda miRanda
14034 chr5 112180478 112180478 1 + G A rs114463799 112180489 + 112180469 112180509 41 AAAATCTGTGTAACTGTAAAACATTGAATGAAACTATTTTA AAAATCTGTATAACTGTAAAACATTGAATGAAACTATTTTA < 41bp 1 0.250887689871636 1 0.75196760892868 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 APC ENSG00000134982 UTR3 Human protein_coding chr5:112180489 chr5:112180478 . . 0 hm6A_associated_SNPs_7614 0 0 1 5 112180477 112180500 mRNA hsa-miR-181b APC miRanda miRanda
14034 chr5 112180478 112180478 1 + G A rs114463799 112180489 + 112180469 112180509 41 AAAATCTGTGTAACTGTAAAACATTGAATGAAACTATTTTA AAAATCTGTATAACTGTAAAACATTGAATGAAACTATTTTA < 41bp 1 0.250887689871636 1 0.75196760892868 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 APC ENSG00000134982 UTR3 Human protein_coding chr5:112180489 chr5:112180478 . . 0 hm6A_associated_SNPs_7614 0 0 1 5 112180477 112180500 mRNA hsa-miR-181c APC miRanda miRanda
14034 chr5 112180478 112180478 1 + G A rs114463799 112180489 + 112180469 112180509 41 AAAATCTGTGTAACTGTAAAACATTGAATGAAACTATTTTA AAAATCTGTATAACTGTAAAACATTGAATGAAACTATTTTA < 41bp 1 0.250887689871636 1 0.75196760892868 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 APC ENSG00000134982 UTR3 Human protein_coding chr5:112180489 chr5:112180478 . . 0 hm6A_associated_SNPs_7614 0 0 1 5 112180477 112180500 mRNA hsa-miR-181d APC miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929232 + 112929212 112929252 41 TATAACCACTGAATGCACTGACTTTCAAAAACTGAGGTGGG TATAACCACTGAATGCACTGACTTTCAAAAGCTGAGGTGGG < 41bp 1 0.60045032705897 1 0.936498522758484 experiment 0.79909934588206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929232 chr5:112929242 . . 0 hm6A_associated_SNPs_7637 0 0 1 6 112929242 112929264 mRNA hsa-miR-30a YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929232 + 112929212 112929252 41 TATAACCACTGAATGCACTGACTTTCAAAAACTGAGGTGGG TATAACCACTGAATGCACTGACTTTCAAAAGCTGAGGTGGG < 41bp 1 0.60045032705897 1 0.936498522758484 experiment 0.79909934588206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929232 chr5:112929242 . . 0 hm6A_associated_SNPs_7637 0 0 1 6 112929242 112929264 mRNA hsa-miR-30c YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929232 + 112929212 112929252 41 TATAACCACTGAATGCACTGACTTTCAAAAACTGAGGTGGG TATAACCACTGAATGCACTGACTTTCAAAAGCTGAGGTGGG < 41bp 1 0.60045032705897 1 0.936498522758484 experiment 0.79909934588206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929232 chr5:112929242 . . 0 hm6A_associated_SNPs_7637 0 0 1 6 112929242 112929264 mRNA hsa-miR-30d YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929232 + 112929212 112929252 41 TATAACCACTGAATGCACTGACTTTCAAAAACTGAGGTGGG TATAACCACTGAATGCACTGACTTTCAAAAGCTGAGGTGGG < 41bp 1 0.60045032705897 1 0.936498522758484 experiment 0.79909934588206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929232 chr5:112929242 . . 0 hm6A_associated_SNPs_7637 0 0 1 6 112929241 112929264 mRNA hsa-miR-30b YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929232 + 112929212 112929252 41 TATAACCACTGAATGCACTGACTTTCAAAAACTGAGGTGGG TATAACCACTGAATGCACTGACTTTCAAAAGCTGAGGTGGG < 41bp 1 0.60045032705897 1 0.936498522758484 experiment 0.79909934588206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929232 chr5:112929242 . . 0 hm6A_associated_SNPs_7637 0 0 1 6 112929238 112929259 mRNA hsa-miR-362-3p YTHDC2 miRanda miRanda
14034 chr5 112929242 112929242 1 + A G rs532861617 112929232 + 112929212 112929252 41 TATAACCACTGAATGCACTGACTTTCAAAAACTGAGGTGGG TATAACCACTGAATGCACTGACTTTCAAAAGCTGAGGTGGG < 41bp 1 0.60045032705897 1 0.936498522758484 experiment 0.79909934588206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112929232 chr5:112929242 . . 0 hm6A_associated_SNPs_7637 0 0 1 6 112929242 112929259 mRNA hsa-miR-329 YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930812 + 112930792 112930832 41 AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGTTT AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGCTT < 41bp 1 0.194778228196403 1 0.774140596389771 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930812 chr5:112930830 . . 0 hm6A_associated_SNPs_7640 0 0 1 5 112930814 112930835 mRNA hsa-miR-30a YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930812 + 112930792 112930832 41 AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGTTT AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGCTT < 41bp 1 0.194778228196403 1 0.774140596389771 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930812 chr5:112930830 . . 0 hm6A_associated_SNPs_7640 0 0 1 5 112930813 112930835 mRNA hsa-miR-30c YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930812 + 112930792 112930832 41 AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGTTT AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGCTT < 41bp 1 0.194778228196403 1 0.774140596389771 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930812 chr5:112930830 . . 0 hm6A_associated_SNPs_7640 0 0 1 5 112930814 112930835 mRNA hsa-miR-30d YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930812 + 112930792 112930832 41 AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGTTT AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGCTT < 41bp 1 0.194778228196403 1 0.774140596389771 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930812 chr5:112930830 . . 0 hm6A_associated_SNPs_7640 0 0 1 5 112930814 112930835 mRNA hsa-miR-30b YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930812 + 112930792 112930832 41 AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGTTT AATGTTCTAAATTTGGAAGGACTTAAAAAAAAAACTTGCTT < 41bp 1 0.194778228196403 1 0.774140596389771 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930812 chr5:112930830 . . 0 hm6A_associated_SNPs_7640 0 0 1 5 112930814 112930835 mRNA hsa-miR-30e YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930825 + 112930805 112930845 41 TGGAAGGACTTAAAAAAAAAACTTGTTTAAATTTCCATCTG TGGAAGGACTTAAAAAAAAAACTTGCTTAAATTTCCATCTG < 41bp 1 0.0874210606169396 1 0.481618195772171 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930825 chr5:112930830 . . 0 hm6A_associated_SNPs_7641 0 0 1 5 112930814 112930835 mRNA hsa-miR-30a YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930825 + 112930805 112930845 41 TGGAAGGACTTAAAAAAAAAACTTGTTTAAATTTCCATCTG TGGAAGGACTTAAAAAAAAAACTTGCTTAAATTTCCATCTG < 41bp 1 0.0874210606169396 1 0.481618195772171 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930825 chr5:112930830 . . 0 hm6A_associated_SNPs_7641 0 0 1 5 112930813 112930835 mRNA hsa-miR-30c YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930825 + 112930805 112930845 41 TGGAAGGACTTAAAAAAAAAACTTGTTTAAATTTCCATCTG TGGAAGGACTTAAAAAAAAAACTTGCTTAAATTTCCATCTG < 41bp 1 0.0874210606169396 1 0.481618195772171 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930825 chr5:112930830 . . 0 hm6A_associated_SNPs_7641 0 0 1 5 112930814 112930835 mRNA hsa-miR-30d YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930825 + 112930805 112930845 41 TGGAAGGACTTAAAAAAAAAACTTGTTTAAATTTCCATCTG TGGAAGGACTTAAAAAAAAAACTTGCTTAAATTTCCATCTG < 41bp 1 0.0874210606169396 1 0.481618195772171 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930825 chr5:112930830 . . 0 hm6A_associated_SNPs_7641 0 0 1 5 112930814 112930835 mRNA hsa-miR-30b YTHDC2 miRanda miRanda
14034 chr5 112930830 112930830 1 + T C rs10478130 112930825 + 112930805 112930845 41 TGGAAGGACTTAAAAAAAAAACTTGTTTAAATTTCCATCTG TGGAAGGACTTAAAAAAAAAACTTGCTTAAATTTCCATCTG < 41bp 1 0.0874210606169396 1 0.481618195772171 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 YTHDC2 ENSG00000047188 UTR3 Human protein_coding chr5:112930825 chr5:112930830 . . 0 hm6A_associated_SNPs_7641 0 0 1 5 112930814 112930835 mRNA hsa-miR-30e YTHDC2 miRanda miRanda
14034 chr5 115249271 115249271 1 + G A rs3879477 115249284 + 115249264 115249304 41 AATAGAGGAGGAGAGTCTTAACTTTTGCTCTTGGATTTAAG AATAGAGAAGGAGAGTCTTAACTTTTGCTCTTGGATTTAAG < 41bp 1 0.527880627338774 1 0.400595366954803 experiment 0.944238745322453 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 AP3S1 ENSG00000177879 UTR3 Human protein_coding chr5:115249284 chr5:115249271 . . 0 hm6A_associated_SNPs_7644 0 0 0 1 115249264 115249284 mRNA hsa-miR-499-5p AP3S1 miRanda miRanda
14034 chr5 118582779 118582779 1 + G C rs2174433 118582771 + 118582751 118582791 41 CCATTTTTAGAAATATTGGAACTGGAGTGATGCAAATTGAG CCATTTTTAGAAATATTGGAACTGGAGTCATGCAAATTGAG < 41bp 1 0.635557970485171 1 0.857917070388794 experiment 0.728884059029658 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 29 DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118582771 chr5:118582779 synonymous SNV . 0 hm6A_associated_SNPs_7650 0 0 1 1 118582776 118582798 mRNA hsa-miR-339-5p DMXL1 miRanda miRanda
14034 chr5 121363355 121363355 1 + C G rs150145387 121363341 + 121363321 121363361 41 TATTTAAAATAATAATGGAAACATAGGAAATCAGCTATTTA TATTTAAAATAATAATGGAAACATAGGAAATCAGGTATTTA < 41bp 1 0.118824118335178 1 0.00266936421394348 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 SRFBP1 ENSG00000151304 UTR3 Human protein_coding chr5:121363341 chr5:121363355 . . 0 hm6A_associated_SNPs_7657 0 0 0 1 121363351 121363373 mRNA hsa-miR-134 SRFBP1 miRanda miRanda
14034 chr5 122950330 122950330 1 + G C rs3797534 122950343 + 122950323 122950363 41 CCCATCAGTGAATGGAATGGACCAATGAGGTGGTATCAATG CCCATCACTGAATGGAATGGACCAATGAGGTGGTATCAATG < 41bp 1 0.678737826098071 1 0.962031602859497 experiment 0.642524347803857 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 CSNK1G3 ENSG00000151292 UTR3 Human protein_coding chr5:122950343 chr5:122950330 . . 0 hm6A_associated_SNPs_7658 0 0 1 3 122950327 122950348 mRNA hsa-miR-133a CSNK1G3 miRanda miRanda
14034 chr5 122950330 122950330 1 + G C rs3797534 122950343 + 122950323 122950363 41 CCCATCAGTGAATGGAATGGACCAATGAGGTGGTATCAATG CCCATCACTGAATGGAATGGACCAATGAGGTGGTATCAATG < 41bp 1 0.678737826098071 1 0.962031602859497 experiment 0.642524347803857 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 CSNK1G3 ENSG00000151292 UTR3 Human protein_coding chr5:122950343 chr5:122950330 . . 0 hm6A_associated_SNPs_7658 0 0 1 3 122950327 122950348 mRNA hsa-miR-133b CSNK1G3 miRanda miRanda
14034 chr5 122950330 122950330 1 + G C rs3797534 122950343 + 122950323 122950363 41 CCCATCAGTGAATGGAATGGACCAATGAGGTGGTATCAATG CCCATCACTGAATGGAATGGACCAATGAGGTGGTATCAATG < 41bp 1 0.678737826098071 1 0.962031602859497 experiment 0.642524347803857 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 CSNK1G3 ENSG00000151292 UTR3 Human protein_coding chr5:122950343 chr5:122950330 . . 0 hm6A_associated_SNPs_7658 0 0 1 3 122950312 122950334 mRNA hsa-miR-433 CSNK1G3 miRanda miRanda
14034 chr5 122950644 122950644 1 + C G rs115397951 122950639 + 122950619 122950659 41 GTTATTCATAAGTCATATTAACATTCTCTCCGTGAAATCAT GTTATTCATAAGTCATATTAACATTGTCTCCGTGAAATCAT < 41bp 1 0.589227144160591 1 0.770535945892334 experiment 0.821545711678819 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CSNK1G3 ENSG00000151292 UTR3 Human protein_coding chr5:122950639 chr5:122950644 . . 0 hm6A_associated_SNPs_7659 0 0 1 1 122950629 122950650 mRNA hsa-miR-185 CSNK1G3 miRanda miRanda
14034 chr5 122950649 122950649 1 + C T rs572036943 122950639 + 122950619 122950659 41 GTTATTCATAAGTCATATTAACATTCTCTCCGTGAAATCAT GTTATTCATAAGTCATATTAACATTCTCTCTGTGAAATCAT < 41bp 1 0.553691440009132 1 0.723708689212799 experiment 0.892617119981735 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 CSNK1G3 ENSG00000151292 UTR3 Human protein_coding chr5:122950639 chr5:122950649 . . 0 hm6A_associated_SNPs_7660 0 0 1 1 122950629 122950650 mRNA hsa-miR-185 CSNK1G3 miRanda miRanda
14034 chr5 122951367 122951367 1 + A G rs115541717 122951371 + 122951351 122951391 41 CTTTGTTTTAAGCCATAAAGACACACATGTAGTTTTGTCAC CTTTGTTTTAAGCCATGAAGACACACATGTAGTTTTGTCAC < 41bp 1 0.353343921772134 1 0.209559410810471 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 CSNK1G3 ENSG00000151292 UTR3 Human protein_coding chr5:122951371 chr5:122951367 . . 0 hm6A_associated_SNPs_7661 0 0 1 2 122951345 122951367 mRNA hsa-miR-135a CSNK1G3 miRanda miRanda
14034 chr5 122951367 122951367 1 + A G rs115541717 122951371 + 122951351 122951391 41 CTTTGTTTTAAGCCATAAAGACACACATGTAGTTTTGTCAC CTTTGTTTTAAGCCATGAAGACACACATGTAGTTTTGTCAC < 41bp 1 0.353343921772134 1 0.209559410810471 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 CSNK1G3 ENSG00000151292 UTR3 Human protein_coding chr5:122951371 chr5:122951367 . . 0 hm6A_associated_SNPs_7661 0 0 1 2 122951345 122951367 mRNA hsa-miR-135b CSNK1G3 miRanda miRanda
14034 chr5 125828858 125828858 1 + G C rs557483355 125828842 + 125828822 125828862 41 TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGA TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGCAAGA < 41bp 1 0.794750710819016 1 0.727162778377533 experiment 0.410498578361968 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 GRAMD2B ENSG00000155324 UTR3 Human protein_coding chr5:125828842 chr5:125828858 . . 0 hm6A_associated_SNPs_7662 0 0 0 6 125828854 125828873 mRNA hsa-miR-15a GRAMD3 miRanda miRanda
14034 chr5 125828858 125828858 1 + G C rs557483355 125828842 + 125828822 125828862 41 TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGA TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGCAAGA < 41bp 1 0.794750710819016 1 0.727162778377533 experiment 0.410498578361968 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 GRAMD2B ENSG00000155324 UTR3 Human protein_coding chr5:125828842 chr5:125828858 . . 0 hm6A_associated_SNPs_7662 0 0 0 6 125828855 125828873 mRNA hsa-miR-16 GRAMD3 miRanda miRanda
14034 chr5 125828858 125828858 1 + G C rs557483355 125828842 + 125828822 125828862 41 TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGA TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGCAAGA < 41bp 1 0.794750710819016 1 0.727162778377533 experiment 0.410498578361968 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 GRAMD2B ENSG00000155324 UTR3 Human protein_coding chr5:125828842 chr5:125828858 . . 0 hm6A_associated_SNPs_7662 0 0 0 6 125828851 125828873 mRNA hsa-miR-15b GRAMD3 miRanda miRanda
14034 chr5 125828858 125828858 1 + G C rs557483355 125828842 + 125828822 125828862 41 TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGA TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGCAAGA < 41bp 1 0.794750710819016 1 0.727162778377533 experiment 0.410498578361968 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 GRAMD2B ENSG00000155324 UTR3 Human protein_coding chr5:125828842 chr5:125828858 . . 0 hm6A_associated_SNPs_7662 0 0 0 6 125828856 125828873 mRNA hsa-miR-195 GRAMD3 miRanda miRanda
14034 chr5 125828858 125828858 1 + G C rs557483355 125828842 + 125828822 125828862 41 TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGA TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGCAAGA < 41bp 1 0.794750710819016 1 0.727162778377533 experiment 0.410498578361968 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 GRAMD2B ENSG00000155324 UTR3 Human protein_coding chr5:125828842 chr5:125828858 . . 0 hm6A_associated_SNPs_7662 0 0 0 6 125828851 125828873 mRNA hsa-miR-424 GRAMD3 miRanda miRanda
14034 chr5 125828858 125828858 1 + G C rs557483355 125828842 + 125828822 125828862 41 TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGA TTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGCAAGA < 41bp 1 0.794750710819016 1 0.727162778377533 experiment 0.410498578361968 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 GRAMD2B ENSG00000155324 UTR3 Human protein_coding chr5:125828842 chr5:125828858 . . 0 hm6A_associated_SNPs_7662 0 0 0 6 125828853 125828873 mRNA hsa-miR-497 GRAMD3 miRanda miRanda
14034 chr5 125829084 125829084 1 + A G rs115694486 125829066 + 125829046 125829086 41 GATACATCATATACTGACAAACTCAATGTGGTCCTTTCAAG GATACATCATATACTGACAAACTCAATGTGGTCCTTTCGAG < 41bp 1 0.16516640335248 1 0.957350730895996 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 GRAMD2B ENSG00000155324 UTR3 Human protein_coding chr5:125829066 chr5:125829084 . . 0 hm6A_associated_SNPs_7663 0 0 0 1 125829064 125829085 mRNA hsa-miR-488 GRAMD3 miRanda miRanda
14034 chr5 126172668 126172668 1 + T A rs541191297 126172679 + 126172659 126172699 41 TTGCTTAAATTTCTTATGTGACATTAACAAATAAAAAAGCT TTGCTTAAAATTCTTATGTGACATTAACAAATAAAAAAGCT < 41bp 1 0.467880664424487 1 0.00702542066574097 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 LMNB1 ENSG00000113368 UTR3 Human protein_coding chr5:126172679 chr5:126172668 . . 0 hm6A_associated_SNPs_7669 0 0 1 3 126172663 126172680 mRNA hsa-miR-23a LMNB1 miRanda miRanda
14034 chr5 126172668 126172668 1 + T A rs541191297 126172679 + 126172659 126172699 41 TTGCTTAAATTTCTTATGTGACATTAACAAATAAAAAAGCT TTGCTTAAAATTCTTATGTGACATTAACAAATAAAAAAGCT < 41bp 1 0.467880664424487 1 0.00702542066574097 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 LMNB1 ENSG00000113368 UTR3 Human protein_coding chr5:126172679 chr5:126172668 . . 0 hm6A_associated_SNPs_7669 0 0 1 3 126172660 126172680 mRNA hsa-miR-23b LMNB1 miRanda miRanda
14034 chr5 126172668 126172668 1 + T A rs541191297 126172679 + 126172659 126172699 41 TTGCTTAAATTTCTTATGTGACATTAACAAATAAAAAAGCT TTGCTTAAAATTCTTATGTGACATTAACAAATAAAAAAGCT < 41bp 1 0.467880664424487 1 0.00702542066574097 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 LMNB1 ENSG00000113368 UTR3 Human protein_coding chr5:126172679 chr5:126172668 . . 0 hm6A_associated_SNPs_7669 0 0 1 3 126172653 126172674 mRNA hsa-miR-539 LMNB1 miRanda miRanda
14034 chr5 126887760 126887760 1 + A G rs557186225 126887778 + 126887758 126887798 41 GCATCATGTCATTCCAGGAGACAAAAAGAAACAAATCCTTT GCGTCATGTCATTCCAGGAGACAAAAAGAAACAAATCCTTT < 41bp 1 0.394146344627999 1 0.543782711029053 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 3 PRRC1 ENSG00000164244 UTR3 Human protein_coding chr5:126887778 chr5:126887760 . . 0 hm6A_associated_SNPs_7670 0 0 1 1 126887749 126887773 mRNA hsa-miR-7 PRRC1 miRanda miRanda
14034 chr5 126887800 126887800 1 + T C rs75251877 126887788 + 126887768 126887808 41 ATTCCAGGAGACAAAAAGAAACAAATCCTTTTTATAGTCAT ATTCCAGGAGACAAAAAGAAACAAATCCTTTTCATAGTCAT < 41bp 1 0.315280991665798 1 0.439726918935776 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PRRC1 ENSG00000164244 UTR3 Human protein_coding chr5:126887788 chr5:126887800 . . 0 hm6A_associated_SNPs_7671 0 0 1 2 126887798 126887818 mRNA hsa-miR-203 PRRC1 miRanda miRanda
14034 chr5 126887800 126887800 1 + T C rs75251877 126887788 + 126887768 126887808 41 ATTCCAGGAGACAAAAAGAAACAAATCCTTTTTATAGTCAT ATTCCAGGAGACAAAAAGAAACAAATCCTTTTCATAGTCAT < 41bp 1 0.315280991665798 1 0.439726918935776 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PRRC1 ENSG00000164244 UTR3 Human protein_coding chr5:126887788 chr5:126887800 . . 0 hm6A_associated_SNPs_7671 0 0 1 2 126887791 126887812 mRNA hsa-miR-379 PRRC1 miRanda miRanda
14034 chr5 126889490 126889490 1 + T C rs73333200 126889477 + 126889457 126889497 41 TCATAGAATCACAAATACTGACATTTCATTAGATGATTATT TCATAGAATCACAAATACTGACATTTCATTAGACGATTATT < 41bp 1 0.291664437816094 1 0.25867623090744 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126889477 chr5:126889490 synonymous SNV . 0 hm6A_associated_SNPs_7673 0 0 1 1 126889475 126889495 mRNA hsa-miR-216b PRRC1 miRanda miRanda
14034 chr5 128448845 128448845 1 + C A rs181375321 128448835 + 128448815 128448855 41 TTTTTGCGCCTCCTAGTGAAACTTAACCAGCTAGACCATTT TTTTTGCGCCTCCTAGTGAAACTTAACCAGATAGACCATTT < 41bp 1 0.627033014465976 1 0.790409207344055 experiment 0.745933971068049 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 ISOC1 ENSG00000066583 UTR3 Human protein_coding chr5:128448835 chr5:128448845 . . 0 hm6A_associated_SNPs_7677 0 0 1 1 128448845 128448866 mRNA hsa-miR-138 ISOC1 miRanda miRanda
14034 chr5 128449264 128449264 1 + A G rs540308959 128449276 + 128449256 128449296 41 ATAATTACATATCTTTCTTGACTATACTGATTTCTTATTTT ATAATTACGTATCTTTCTTGACTATACTGATTTCTTATTTT < 41bp 1 0.259558715654149 1 0.50294017791748 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ISOC1 ENSG00000066583 UTR3 Human protein_coding chr5:128449276 chr5:128449264 . . 0 hm6A_associated_SNPs_7678 0 0 1 2 128449244 128449269 mRNA hsa-miR-190 ISOC1 miRanda miRanda
14034 chr5 128449264 128449264 1 + A G rs540308959 128449276 + 128449256 128449296 41 ATAATTACATATCTTTCTTGACTATACTGATTTCTTATTTT ATAATTACGTATCTTTCTTGACTATACTGATTTCTTATTTT < 41bp 1 0.259558715654149 1 0.50294017791748 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ISOC1 ENSG00000066583 UTR3 Human protein_coding chr5:128449276 chr5:128449264 . . 0 hm6A_associated_SNPs_7678 0 0 1 2 128449250 128449269 mRNA hsa-miR-190b ISOC1 miRanda miRanda
14034 chr5 128449348 128449348 1 + A G rs11553450 128449337 + 128449317 128449357 41 TGTTAATATTCTCTCTTTTAACTGAAAAGGGATGGGATAGA TGTTAATATTCTCTCTTTTAACTGAAAAGGGGTGGGATAGA < 41bp 1 0.150241266214277 1 0.711621284484863 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ISOC1 ENSG00000066583 UTR3 Human protein_coding chr5:128449337 chr5:128449348 . . 0 hm6A_associated_SNPs_7679 0 0 1 3 128449329 128449349 mRNA hsa-miR-204 ISOC1 miRanda miRanda
14034 chr5 128449348 128449348 1 + A G rs11553450 128449337 + 128449317 128449357 41 TGTTAATATTCTCTCTTTTAACTGAAAAGGGATGGGATAGA TGTTAATATTCTCTCTTTTAACTGAAAAGGGGTGGGATAGA < 41bp 1 0.150241266214277 1 0.711621284484863 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ISOC1 ENSG00000066583 UTR3 Human protein_coding chr5:128449337 chr5:128449348 . . 0 hm6A_associated_SNPs_7679 0 0 1 3 128449339 128449361 mRNA hsa-miR-205 ISOC1 miRanda miRanda
14034 chr5 128449348 128449348 1 + A G rs11553450 128449337 + 128449317 128449357 41 TGTTAATATTCTCTCTTTTAACTGAAAAGGGATGGGATAGA TGTTAATATTCTCTCTTTTAACTGAAAAGGGGTGGGATAGA < 41bp 1 0.150241266214277 1 0.711621284484863 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ISOC1 ENSG00000066583 UTR3 Human protein_coding chr5:128449337 chr5:128449348 . . 0 hm6A_associated_SNPs_7679 0 0 1 3 128449329 128449349 mRNA hsa-miR-211 ISOC1 miRanda miRanda
14034 chr5 129073196 129073196 1 + G T rs57462756 129073192 + 129073172 129073212 41 AATAGATCATTATACTTAAAACAAGTTTTCGTTGTTTGTTA AATAGATCATTATACTTAAAACAATTTTTCGTTGTTTGTTA < 41bp 1 0.0396568031631135 1 0.0230114161968231 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 ADAMTS19 ENSG00000251680 ncRNA_intronic Human antisense chr5:129073192 chr5:129073196 . . 0 hm6A_associated_SNPs_7680 0 0 0 1 129073191 129073212 mRNA hsa-miR-495 ADAMTS19 miRanda miRanda
14034 chr5 129073197 129073197 1 + T G rs1549892 129073192 + 129073172 129073212 41 AATAGATCATTATACTTAAAACAAGTTTTCGTTGTTTGTTA AATAGATCATTATACTTAAAACAAGGTTTCGTTGTTTGTTA < 41bp 1 0.0398928170049546 1 0.0341644287109375 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 ADAMTS19 ENSG00000251680 ncRNA_intronic Human antisense chr5:129073192 chr5:129073197 . . 0 hm6A_associated_SNPs_7681 0 0 0 1 129073191 129073212 mRNA hsa-miR-495 ADAMTS19 miRanda miRanda
14034 chr5 129073624 129073624 1 + A G rs57808307 129073644 + 129073624 129073664 41 AGAAATCGTTAGAAATGGTGACATCTTACAAAAAATGTGTA GGAAATCGTTAGAAATGGTGACATCTTACAAAAAATGTGTA < 41bp 1 0.061206424146456 1 0.245788276195526 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 ADAMTS19 ENSG00000251680 ncRNA_intronic Human antisense chr5:129073644 chr5:129073624 . . 0 hm6A_associated_SNPs_7682 0 0 0 2 129073624 129073645 mRNA hsa-miR-23a ADAMTS19 miRanda miRanda
14034 chr5 129073624 129073624 1 + A G rs57808307 129073644 + 129073624 129073664 41 AGAAATCGTTAGAAATGGTGACATCTTACAAAAAATGTGTA GGAAATCGTTAGAAATGGTGACATCTTACAAAAAATGTGTA < 41bp 1 0.061206424146456 1 0.245788276195526 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 ADAMTS19 ENSG00000251680 ncRNA_intronic Human antisense chr5:129073644 chr5:129073624 . . 0 hm6A_associated_SNPs_7682 0 0 0 2 129073624 129073645 mRNA hsa-miR-23b ADAMTS19 miRanda miRanda
14034 chr5 130727826 130727826 1 + C G rs186031595 130727825 + 130727805 130727845 41 GATCTTTTTTGTGAATGCTAACACCATTTTGCAGTTTTTTT GATCTTTTTTGTGAATGCTAAGACCATTTTGCAGTTTTTTT Direct Loss 1 0.169408094673734 1 0.902538180351257 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 CDC42SE2 ENSG00000158985 UTR3 Human protein_coding chr5:130727825 chr5:130727826 . . 0 hm6A_associated_SNPs_7691 0 0 1 3 130727817 130727839 mRNA hsa-miR-19a CDC42SE2 miRanda miRanda
14034 chr5 130727826 130727826 1 + C G rs186031595 130727825 + 130727805 130727845 41 GATCTTTTTTGTGAATGCTAACACCATTTTGCAGTTTTTTT GATCTTTTTTGTGAATGCTAAGACCATTTTGCAGTTTTTTT Direct Loss 1 0.169408094673734 1 0.902538180351257 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 CDC42SE2 ENSG00000158985 UTR3 Human protein_coding chr5:130727825 chr5:130727826 . . 0 hm6A_associated_SNPs_7691 0 0 1 3 130727817 130727839 mRNA hsa-miR-19b CDC42SE2 miRanda miRanda
14034 chr5 130727826 130727826 1 + C G rs186031595 130727825 + 130727805 130727845 41 GATCTTTTTTGTGAATGCTAACACCATTTTGCAGTTTTTTT GATCTTTTTTGTGAATGCTAAGACCATTTTGCAGTTTTTTT Direct Loss 1 0.169408094673734 1 0.902538180351257 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 CDC42SE2 ENSG00000158985 UTR3 Human protein_coding chr5:130727825 chr5:130727826 . . 0 hm6A_associated_SNPs_7691 0 0 1 3 130727818 130727840 mRNA hsa-miR-217 CDC42SE2 miRanda miRanda
14034 chr5 131679621 131679621 1 + C T rs139332157 131679610 + 131679590 131679630 41 CGTTGTTCCCACTGAAATGGACTGACTGTAACGATTGACAC CGTTGTTCCCACTGAAATGGACTGACTGTAATGATTGACAC < 41bp 1 0.63975755079018 1 0.994034826755524 experiment 0.72048489841964 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 MIR3936HG ENSG00000233006 ncRNA_intronic Human processed_transcript chr5:131679610 chr5:131679621 . . 0 hm6A_associated_SNPs_7695 0 0 0 1 131679604 131679625 mRNA hsa-miR-487b SLC22A4 miRanda miRanda
14034 chr5 131730450 131730450 1 + C T rs572377511 131730449 + 131730429 131730469 41 CCTTTTCTCAGTTACAGAGGACATTAACTGGATCATTGCTT CCTTTTCTCAGTTACAGAGGATATTAACTGGATCATTGCTT Direct Loss 1 0.468456441407126 1 0.751221179962158 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 22 SLC22A5 ENSG00000197375 UTR3 Human protein_coding chr5:131730449 chr5:131730450 . . 0 hm6A_associated_SNPs_7698 0 0 1 1 131730435 131730461 mRNA hsa-miR-145 SLC22A5 miRanda miRanda
14034 chr5 131978340 131978340 1 + C G rs6870427 131978322 + 131978302 131978342 41 GGTTCAGCAGTACAGCCGAGACTCGACTCTGTGCCTCCCTC GGTTCAGCAGTACAGCCGAGACTCGACTCTGTGCCTCCGTC < 41bp 1 0.352462436460653 1 0.407347679138184 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 TH2LCRR ENSG00000223442 ncRNA_intronic Human antisense chr5:131978322 chr5:131978340 . . 0 hm6A_associated_SNPs_7699 0 0 1 2 131978337 131978361 mRNA hsa-miR-103 RAD50 miRanda miRanda
14034 chr5 131978340 131978340 1 + C G rs6870427 131978322 + 131978302 131978342 41 GGTTCAGCAGTACAGCCGAGACTCGACTCTGTGCCTCCCTC GGTTCAGCAGTACAGCCGAGACTCGACTCTGTGCCTCCGTC < 41bp 1 0.352462436460653 1 0.407347679138184 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 TH2LCRR ENSG00000223442 ncRNA_intronic Human antisense chr5:131978322 chr5:131978340 . . 0 hm6A_associated_SNPs_7699 0 0 1 2 131978337 131978361 mRNA hsa-miR-107 RAD50 miRanda miRanda
14034 chr5 134164822 134164822 1 + C G rs60920358 134164836 + 134164816 134164856 41 CCCCACCTTGATGTTACATGACTCTGGAACAATATGAACTG CCCCACGTTGATGTTACATGACTCTGGAACAATATGAACTG < 41bp 1 0.26557083492258 1 0.728046774864197 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 DDX46 ENSG00000145833 UTR3 Human protein_coding chr5:134164836 chr5:134164822 . . 0 hm6A_associated_SNPs_7725 0 0 1 1 134164801 134164822 mRNA hsa-miR-491-5p DDX46 miRanda miRanda
14034 chr5 134192470 134192470 1 + T C rs112492801 134192481 + 134192461 134192501 41 AGGTTGATATCTACCAAAGGACACAAATTGAATGGTAGACT AGGTTGATACCTACCAAAGGACACAAATTGAATGGTAGACT < 41bp 1 0.703819515643827 1 0.125332206487656 experiment 0.592360968712346 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134192481 chr5:134192470 . . 0 hm6A_associated_SNPs_7727 0 0 1 2 134192455 134192480 mRNA hsa-miR-9 C5orf24 miRanda miRanda
14034 chr5 134192470 134192470 1 + T C rs112492801 134192481 + 134192461 134192501 41 AGGTTGATATCTACCAAAGGACACAAATTGAATGGTAGACT AGGTTGATACCTACCAAAGGACACAAATTGAATGGTAGACT < 41bp 1 0.703819515643827 1 0.125332206487656 experiment 0.592360968712346 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134192481 chr5:134192470 . . 0 hm6A_associated_SNPs_7727 0 0 1 2 134192462 134192487 mRNA hsa-miR-599 C5orf24 miRanda miRanda
14034 chr5 134193187 134193187 1 + T A rs145780106 134193171 + 134193151 134193191 41 TATGTGCACTGGCGTCTAAGACAGTGACCTCAACAATATTA TATGTGCACTGGCGTCTAAGACAGTGACCTCAACAAAATTA < 41bp 1 0.61696775293463 1 0.701426446437836 experiment 0.76606449413074 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134193171 chr5:134193187 . . 0 hm6A_associated_SNPs_7731 0 0 1 2 134193179 134193201 mRNA hsa-miR-19a C5orf24 miRanda miRanda
14034 chr5 134193187 134193187 1 + T A rs145780106 134193171 + 134193151 134193191 41 TATGTGCACTGGCGTCTAAGACAGTGACCTCAACAATATTA TATGTGCACTGGCGTCTAAGACAGTGACCTCAACAAAATTA < 41bp 1 0.61696775293463 1 0.701426446437836 experiment 0.76606449413074 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134193171 chr5:134193187 . . 0 hm6A_associated_SNPs_7731 0 0 1 2 134193179 134193201 mRNA hsa-miR-19b C5orf24 miRanda miRanda
14034 chr5 134194352 134194352 1 + T G rs113157441 134194341 + 134194321 134194361 41 TTTCTTTAAAAAGTACTTTAACATGCCTTATTTATTATATT TTTCTTTAAAAAGTACTTTAACATGCCTTATGTATTATATT < 41bp 1 0.39861978328447 1 0.168915003538132 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134194341 chr5:134194352 . . 0 hm6A_associated_SNPs_7732 0 0 1 2 134194335 134194360 mRNA hsa-miR-374a C5orf24 miRanda miRanda
14034 chr5 134194352 134194352 1 + T G rs113157441 134194341 + 134194321 134194361 41 TTTCTTTAAAAAGTACTTTAACATGCCTTATTTATTATATT TTTCTTTAAAAAGTACTTTAACATGCCTTATGTATTATATT < 41bp 1 0.39861978328447 1 0.168915003538132 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134194341 chr5:134194352 . . 0 hm6A_associated_SNPs_7732 0 0 1 2 134194335 134194360 mRNA hsa-miR-374b C5orf24 miRanda miRanda
14034 chr5 134194848 134194848 1 + G A rs62380022 134194838 + 134194818 134194858 41 TTCTAAGAAGCTTTAAAAGAACAATTCAGGGGTTATTGATA TTCTAAGAAGCTTTAAAAGAACAATTCAGGAGTTATTGATA < 41bp 1 0.51183902568732 1 0.552875638008118 experiment 0.976321948625361 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134194838 chr5:134194848 . . 0 hm6A_associated_SNPs_7733 0 0 1 1 134194837 134194859 mRNA hsa-miR-374a C5orf24 miRanda miRanda
14034 chr5 134194850 134194850 1 + T A rs140681325 134194838 + 134194818 134194858 41 TTCTAAGAAGCTTTAAAAGAACAATTCAGGGGTTATTGATA TTCTAAGAAGCTTTAAAAGAACAATTCAGGGGATATTGATA < 41bp 1 0.537558710211299 1 0.564690172672272 experiment 0.924882579577402 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 C5orf24 ENSG00000181904 UTR3 Human protein_coding chr5:134194838 chr5:134194850 . . 0 hm6A_associated_SNPs_7734 0 0 1 1 134194837 134194859 mRNA hsa-miR-374a C5orf24 miRanda miRanda
14034 chr5 137275641 137275641 1 - G A rs529474865 137275627 - 137275607 137275647 41 ATACATCCTTTTAGCAAAAGACTGGAATTTTATCCTTTCAA ATACATTCTTTTAGCAAAAGACTGGAATTTTATCCTTTCAA < 41bp 1 0.677163759897906 1 0.921840906143188 experiment 0.645672480204188 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 FAM13B;PKD2L2 ENSG00000031003;ENSG00000078795 UTR3 Human other chr5:137275627 chr5:137275641 . . 0 hm6A_associated_SNPs_7762 0 0 1 1 137275621 137275643 mRNA hsa-miR-145 FAM13B miRanda miRanda
14034 chr5 137685031 137685031 1 + A G rs147409045 137685014 + 137684994 137685034 41 CCTCCACTTTAGCTGTTTTGACTATTTGAATTTTCACATAT CCTCCACTTTAGCTGTTTTGACTATTTGAATTTTCACGTAT < 41bp 1 0.202309124218515 1 0.784130930900574 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 FAM53C ENSG00000249971 ncRNA_exonic Human antisense chr5:137685014 chr5:137685031 . . 0 hm6A_associated_SNPs_7765 0 0 1 2 137685031 137685050 mRNA hsa-miR-330-5p FAM53C miRanda miRanda
14034 chr5 137685031 137685031 1 + A G rs147409045 137685014 + 137684994 137685034 41 CCTCCACTTTAGCTGTTTTGACTATTTGAATTTTCACATAT CCTCCACTTTAGCTGTTTTGACTATTTGAATTTTCACGTAT < 41bp 1 0.202309124218515 1 0.784130930900574 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 FAM53C ENSG00000249971 ncRNA_exonic Human antisense chr5:137685014 chr5:137685031 . . 0 hm6A_associated_SNPs_7765 0 0 1 2 137685031 137685050 mRNA hsa-miR-326 FAM53C miRanda miRanda
14034 chr5 138270446 138270446 1 + C G rs184649187 138270426 + 138270406 138270446 41 GTCTCGATGCCATAATCAGAACACACTTTTTTTCCTCTTTC GTCTCGATGCCATAATCAGAACACACTTTTTTTCCTCTTTG < 41bp 1 0.369409247068547 1 0.209226608276367 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 CTNNA1 ENSG00000044115 UTR3 Human protein_coding chr5:138270426 chr5:138270446 . . 0 hm6A_associated_SNPs_7772 0 0 1 2 138270443 138270464 mRNA hsa-miR-33a CTNNA1 miRanda miRanda
14034 chr5 138270446 138270446 1 + C G rs184649187 138270426 + 138270406 138270446 41 GTCTCGATGCCATAATCAGAACACACTTTTTTTCCTCTTTC GTCTCGATGCCATAATCAGAACACACTTTTTTTCCTCTTTG < 41bp 1 0.369409247068547 1 0.209226608276367 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 CTNNA1 ENSG00000044115 UTR3 Human protein_coding chr5:138270426 chr5:138270446 . . 0 hm6A_associated_SNPs_7772 0 0 1 2 138270445 138270464 mRNA hsa-miR-33b CTNNA1 miRanda miRanda
14034 chr5 138270488 138270488 1 + A G rs148955740 138270491 + 138270471 138270511 41 CATTGGGCTCACTTCTAATAACTGCAGTGTTTCCCGCCTTG CATTGGGCTCACTTCTAGTAACTGCAGTGTTTCCCGCCTTG < 41bp 1 0.512078117840203 1 0.30188262462616 experiment 0.975843764319593 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 CTNNA1 ENSG00000044115 UTR3 Human protein_coding chr5:138270491 chr5:138270488 . . 0 hm6A_associated_SNPs_7773 0 0 1 3 138270474 138270499 mRNA hsa-miR-217 CTNNA1 miRanda miRanda
14034 chr5 138270488 138270488 1 + A G rs148955740 138270491 + 138270471 138270511 41 CATTGGGCTCACTTCTAATAACTGCAGTGTTTCCCGCCTTG CATTGGGCTCACTTCTAGTAACTGCAGTGTTTCCCGCCTTG < 41bp 1 0.512078117840203 1 0.30188262462616 experiment 0.975843764319593 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 CTNNA1 ENSG00000044115 UTR3 Human protein_coding chr5:138270491 chr5:138270488 . . 0 hm6A_associated_SNPs_7773 0 0 1 3 138270481 138270502 mRNA hsa-miR-141 CTNNA1 miRanda miRanda
14034 chr5 138270488 138270488 1 + A G rs148955740 138270491 + 138270471 138270511 41 CATTGGGCTCACTTCTAATAACTGCAGTGTTTCCCGCCTTG CATTGGGCTCACTTCTAGTAACTGCAGTGTTTCCCGCCTTG < 41bp 1 0.512078117840203 1 0.30188262462616 experiment 0.975843764319593 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 CTNNA1 ENSG00000044115 UTR3 Human protein_coding chr5:138270491 chr5:138270488 . . 0 hm6A_associated_SNPs_7773 0 0 1 3 138270482 138270502 mRNA hsa-miR-200a CTNNA1 miRanda miRanda
14034 chr5 138705160 138705160 1 + A G rs186852331 138705146 + 138705126 138705166 41 TGTATGGAGTCTAACATATGACCAATACCAACCCATAATCC TGTATGGAGTCTAACATATGACCAATACCAACCCGTAATCC < 41bp 1 0.189952728632907 1 0.0931699872016907 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PAIP2 ENSG00000272742 ncRNA_exonic Human antisense chr5:138705146 chr5:138705160 . . 0 hm6A_associated_SNPs_7778 0 0 1 2 138705142 138705161 mRNA hsa-miR-296-3p PAIP2 miRanda miRanda
14034 chr5 138705160 138705160 1 + A G rs186852331 138705146 + 138705126 138705166 41 TGTATGGAGTCTAACATATGACCAATACCAACCCATAATCC TGTATGGAGTCTAACATATGACCAATACCAACCCGTAATCC < 41bp 1 0.189952728632907 1 0.0931699872016907 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PAIP2 ENSG00000272742 ncRNA_exonic Human antisense chr5:138705146 chr5:138705160 . . 0 hm6A_associated_SNPs_7778 0 0 1 2 138705156 138705177 mRNA hsa-miR-375 PAIP2 miRanda miRanda
14034 chr5 140078736 140078736 1 + T C rs73273319 140078733 + 140078713 140078753 41 TGTATGCTTGATAATCTTGAACATTGAACTTAATAGATGAC TGTATGCTTGATAATCTTGAACACTGAACTTAATAGATGAC < 41bp 1 0.764519673060444 1 0.702545642852783 experiment 0.470960653879112 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 HARS2 ENSG00000112855 UTR3 Human protein_coding chr5:140078733 chr5:140078736 . . 0 hm6A_associated_SNPs_7793 0 0 1 1 140078734 140078756 mRNA hsa-miR-224 HARS2 miRanda miRanda
14034 chr5 140078736 140078736 1 + T C rs73273319 140078740 + 140078720 140078760 41 TTGATAATCTTGAACATTGAACTTAATAGATGACTTGACAA TTGATAATCTTGAACACTGAACTTAATAGATGACTTGACAA < 41bp 1 0.670380458583455 1 0.876156210899353 experiment 0.659239082833091 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 HARS2 ENSG00000112855 UTR3 Human protein_coding chr5:140078740 chr5:140078736 . . 0 hm6A_associated_SNPs_7794 0 0 1 1 140078734 140078756 mRNA hsa-miR-224 HARS2 miRanda miRanda
14034 chr5 140078736 140078736 1 + T C rs73273319 140078752 + 140078732 140078772 41 AACATTGAACTTAATAGATGACTTGACAAGGTAGAGATCTG AACACTGAACTTAATAGATGACTTGACAAGGTAGAGATCTG < 41bp 1 0.496943239826231 1 0.506961822509766 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 HARS2 ENSG00000112855 UTR3 Human protein_coding chr5:140078752 chr5:140078736 . . 0 hm6A_associated_SNPs_7795 0 0 1 1 140078734 140078756 mRNA hsa-miR-224 HARS2 miRanda miRanda
14034 chr5 148732066 148732066 1 + T A rs181668726 148732056 + 148732036 148732076 41 TCACTACCTCTGTTATATTGACAAGCTCTATTTCCTATTCT TCACTACCTCTGTTATATTGACAAGCTCTAATTCCTATTCT < 41bp 1 0.220213714851338 1 0.00123041868209839 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 GRPEL2-AS1 ENSG00000253618 ncRNA_intronic Human antisense chr5:148732056 chr5:148732066 . . 0 hm6A_associated_SNPs_7838 0 0 1 1 148732058 148732079 mRNA hsa-miR-186 GRPEL2 miRanda miRanda
14034 chr5 148748517 148748517 1 + G A rs188262669 148748532 + 148748512 148748552 41 TCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGG TCTTAACTAGAAACCAGAAGACTACGGGAGGGAATATAAGG < 41bp 1 0.773164621459933 1 0.980826139450073 experiment 0.453670757080133 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31548708;GSE125780;DART-seq;HEK293T;Control 6 PCYOX1L ENSG00000145882 UTR3 Human protein_coding chr5:148748532 chr5:148748517 . . 0 hm6A_associated_SNPs_7842 0 0 1 1 148748514 148748538 mRNA hsa-miR-187 PCYOX1L miRanda miRanda
14034 chr5 148748527 148748527 1 + A G rs182041133 148748532 + 148748512 148748552 41 TCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGG TCTTAGCTAGAAACCGGAAGACTACGGGAGGGAATATAAGG < 41bp 1 0.731822459540637 1 0.973628282546997 experiment 0.536355080918726 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 PCYOX1L ENSG00000145882 UTR3 Human protein_coding chr5:148748532 chr5:148748527 . . 0 hm6A_associated_SNPs_7843 0 0 1 1 148748514 148748538 mRNA hsa-miR-187 PCYOX1L miRanda miRanda
14034 chr5 149227163 149227163 1 + A G rs575113237 149227161 + 149227141 149227181 41 GGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTT GGAATACCTCAATACCTCAGACGAGGCCCTTCCAATATGTT Direct Loss 1 0.730035862923477 1 0.969306588172913 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 PPARGC1B ENSG00000155846 UTR3 Human protein_coding chr5:149227161 chr5:149227163 . . 0 hm6A_associated_SNPs_7850 0 0 1 1 149227163 149227185 mRNA hsa-miR-30c PPARGC1B miRanda miRanda
14034 chr5 150408315 150408315 1 + C T rs4661 150408314 + 150408294 150408334 41 GATCAACCAAGGCAGATGTGACAGCAAGGGCCACGGACCCC GATCAACCAAGGCAGATGTGATAGCAAGGGCCACGGACCCC Direct Loss 1 0.27688577552933 1 0.247252494096756 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 22 GPX3 ENSG00000211445 UTR3 Human protein_coding chr5:150408314 chr5:150408315 . . 0 hm6A_associated_SNPs_7879 0 0 1 1 150408305 150408327 mRNA hsa-miR-328 GPX3 miRanda miRanda
14034 chr5 150868615 150868615 1 + A T rs76223905 150868597 + 150868577 150868617 41 TTCTTCTTCAGTAAACTTTGACTCAACTTCTCCTGCTGAAA TTCTTCTTCAGTAAACTTTGACTCAACTTCTCCTGCTGTAA < 41bp 1 0.0847128572502459 1 0.259767234325409 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 SLC36A1 ENSG00000123643 UTR3 Human protein_coding chr5:150868597 chr5:150868615 . . 0 hm6A_associated_SNPs_7884 0 0 0 1 150868593 150868615 mRNA hsa-miR-214 SLC36A1 miRanda miRanda
14034 chr5 151184234 151184234 1 + T G rs151085013 151184248 + 151184228 151184268 41 TTTTGATAAAGGATCACAAAACAATTCTAAAACCTAACTGT TTTTGAGAAAGGATCACAAAACAATTCTAAAACCTAACTGT < 41bp 1 0.524229419072034 1 0.503659904003143 experiment 0.951541161855933 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184248 chr5:151184234 . . 0 hm6A_associated_SNPs_7889 0 0 1 1 151184228 151184247 mRNA hsa-miR-599 G3BP1 miRanda miRanda
14034 chr5 151184358 151184358 1 + A G rs561531070 151184341 + 151184321 151184361 41 AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAAGTA AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAGGTA < 41bp 1 0.326980108649021 1 0.326164424419403 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184341 chr5:151184358 . . 0 hm6A_associated_SNPs_7890 0 0 1 6 151184357 151184378 mRNA hsa-miR-30a G3BP1 miRanda miRanda
14034 chr5 151184358 151184358 1 + A G rs561531070 151184341 + 151184321 151184361 41 AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAAGTA AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAGGTA < 41bp 1 0.326980108649021 1 0.326164424419403 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184341 chr5:151184358 . . 0 hm6A_associated_SNPs_7890 0 0 1 6 151184353 151184378 mRNA hsa-miR-30c G3BP1 miRanda miRanda
14034 chr5 151184358 151184358 1 + A G rs561531070 151184341 + 151184321 151184361 41 AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAAGTA AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAGGTA < 41bp 1 0.326980108649021 1 0.326164424419403 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184341 chr5:151184358 . . 0 hm6A_associated_SNPs_7890 0 0 1 6 151184357 151184378 mRNA hsa-miR-30d G3BP1 miRanda miRanda
14034 chr5 151184358 151184358 1 + A G rs561531070 151184341 + 151184321 151184361 41 AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAAGTA AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAGGTA < 41bp 1 0.326980108649021 1 0.326164424419403 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184341 chr5:151184358 . . 0 hm6A_associated_SNPs_7890 0 0 1 6 151184357 151184378 mRNA hsa-miR-30b G3BP1 miRanda miRanda
14034 chr5 151184358 151184358 1 + A G rs561531070 151184341 + 151184321 151184361 41 AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAAGTA AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAGGTA < 41bp 1 0.326980108649021 1 0.326164424419403 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184341 chr5:151184358 . . 0 hm6A_associated_SNPs_7890 0 0 1 6 151184357 151184378 mRNA hsa-miR-30e G3BP1 miRanda miRanda
14034 chr5 151184358 151184358 1 + A G rs561531070 151184341 + 151184321 151184361 41 AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAAGTA AACTGATAGGCTTTTCTTGAACTGTTAGTTTTTTTGAGGTA < 41bp 1 0.326980108649021 1 0.326164424419403 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184341 chr5:151184358 . . 0 hm6A_associated_SNPs_7890 0 0 1 6 151184356 151184377 mRNA hsa-miR-494 G3BP1 miRanda miRanda
14034 chr5 153797295 153797295 1 + C T rs3822711 153797289 + 153797269 153797309 41 AGCACTCTCCAGGCACAAGGACAGCCCAGCACCAGCTTTAC AGCACTCTCCAGGCACAAGGACAGCCTAGCACCAGCTTTAC < 41bp 1 0.747148293265778 1 0.298735827207565 experiment 0.505703413468444 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 SAP30L-AS1 ENSG00000245275 ncRNA_intronic Human antisense chr5:153797289 chr5:153797295 . . 0 hm6A_associated_SNPs_7899 0 0 1 1 153797295 153797316 mRNA hsa-miR-874 GALNT10 miRanda miRanda
14034 chr5 153799548 153799548 1 + G A rs181083404 153799542 + 153799522 153799562 41 AGCAGCCTTTCCAAAGGGGAACTCCAGAGACATTTCATAAT AGCAGCCTTTCCAAAGGGGAACTCCAAAGACATTTCATAAT < 41bp 1 0.310959246561331 1 0.970222592353821 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 SAP30L-AS1 ENSG00000245275 ncRNA_intronic Human antisense chr5:153799542 chr5:153799548 . . 0 hm6A_associated_SNPs_7902 0 0 1 2 153799537 153799559 mRNA hsa-miR-203 GALNT10 miRanda miRanda
14034 chr5 153799548 153799548 1 + G A rs181083404 153799542 + 153799522 153799562 41 AGCAGCCTTTCCAAAGGGGAACTCCAGAGACATTTCATAAT AGCAGCCTTTCCAAAGGGGAACTCCAAAGACATTTCATAAT < 41bp 1 0.310959246561331 1 0.970222592353821 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 SAP30L-AS1 ENSG00000245275 ncRNA_intronic Human antisense chr5:153799542 chr5:153799548 . . 0 hm6A_associated_SNPs_7902 0 0 1 2 153799546 153799566 mRNA hsa-miR-448 GALNT10 miRanda miRanda
14034 chr5 153799548 153799548 1 + G A rs181083404 153799551 + 153799531 153799571 41 TCCAAAGGGGAACTCCAGAGACATTTCATAATGCAAACAGC TCCAAAGGGGAACTCCAAAGACATTTCATAATGCAAACAGC < 41bp 1 0.490346966687848 1 0.985164284706116 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 18 SAP30L-AS1 ENSG00000245275 ncRNA_intronic Human antisense chr5:153799551 chr5:153799548 . . 0 hm6A_associated_SNPs_7903 0 0 1 2 153799537 153799559 mRNA hsa-miR-203 GALNT10 miRanda miRanda
14034 chr5 153799548 153799548 1 + G A rs181083404 153799551 + 153799531 153799571 41 TCCAAAGGGGAACTCCAGAGACATTTCATAATGCAAACAGC TCCAAAGGGGAACTCCAAAGACATTTCATAATGCAAACAGC < 41bp 1 0.490346966687848 1 0.985164284706116 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 18 SAP30L-AS1 ENSG00000245275 ncRNA_intronic Human antisense chr5:153799551 chr5:153799548 . . 0 hm6A_associated_SNPs_7903 0 0 1 2 153799546 153799566 mRNA hsa-miR-448 GALNT10 miRanda miRanda
14034 chr5 157166598 157166598 1 + C G rs3194515 157166589 + 157166569 157166609 41 TAGCATCCCTACCACCCAGGACACTGGTGCGAATGACACAA TAGCATCCCTACCACCCAGGACACTGGTGGGAATGACACAA < 41bp 1 0.785780024029633 1 0.971694111824036 experiment 0.428439951940735 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 THG1L ENSG00000113272 UTR3 Human protein_coding chr5:157166589 chr5:157166598 . . 0 hm6A_associated_SNPs_7922 0 0 0 1 157166590 157166610 mRNA hsa-miR-599 THG1L miRanda miRanda
14034 chr5 158712926 158712926 1 + A G rs192260484 158712923 + 158712903 158712943 41 GTGACCACTGTTTTGTGTTGACAATATTGCTTTATACAGTT GTGACCACTGTTTTGTGTTGACAGTATTGCTTTATACAGTT < 41bp 1 0.511491411632997 1 0.145033746957779 experiment 0.977017176734005 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 24 UBLCP1 ENSG00000164332 UTR3 Human protein_coding chr5:158712923 chr5:158712926 . . 0 hm6A_associated_SNPs_7923 0 0 1 3 158712926 158712947 mRNA hsa-miR-146a UBLCP1 miRanda miRanda
14034 chr5 158712926 158712926 1 + A G rs192260484 158712923 + 158712903 158712943 41 GTGACCACTGTTTTGTGTTGACAATATTGCTTTATACAGTT GTGACCACTGTTTTGTGTTGACAGTATTGCTTTATACAGTT < 41bp 1 0.511491411632997 1 0.145033746957779 experiment 0.977017176734005 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 24 UBLCP1 ENSG00000164332 UTR3 Human protein_coding chr5:158712923 chr5:158712926 . . 0 hm6A_associated_SNPs_7923 0 0 1 3 158712918 158712939 mRNA hsa-miR-340 UBLCP1 miRanda miRanda
14034 chr5 158712926 158712926 1 + A G rs192260484 158712923 + 158712903 158712943 41 GTGACCACTGTTTTGTGTTGACAATATTGCTTTATACAGTT GTGACCACTGTTTTGTGTTGACAGTATTGCTTTATACAGTT < 41bp 1 0.511491411632997 1 0.145033746957779 experiment 0.977017176734005 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 24 UBLCP1 ENSG00000164332 UTR3 Human protein_coding chr5:158712923 chr5:158712926 . . 0 hm6A_associated_SNPs_7923 0 0 1 3 158712926 158712947 mRNA hsa-miR-146b-5p UBLCP1 miRanda miRanda
14034 chr5 159492118 159492118 1 + C T rs116271667 159492100 + 159492080 159492120 41 AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGCTT AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGTTT < 41bp 1 0.789316593729832 1 0.583315074443817 experiment 0.421366812540337 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TTC1 ENSG00000113312 UTR3 Human protein_coding chr5:159492100 chr5:159492118 . . 0 hm6A_associated_SNPs_7924 0 0 1 6 159492099 159492120 mRNA hsa-miR-15a TTC1 miRanda miRanda
14034 chr5 159492118 159492118 1 + C T rs116271667 159492100 + 159492080 159492120 41 AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGCTT AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGTTT < 41bp 1 0.789316593729832 1 0.583315074443817 experiment 0.421366812540337 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TTC1 ENSG00000113312 UTR3 Human protein_coding chr5:159492100 chr5:159492118 . . 0 hm6A_associated_SNPs_7924 0 0 1 6 159492099 159492120 mRNA hsa-miR-16 TTC1 miRanda miRanda
14034 chr5 159492118 159492118 1 + C T rs116271667 159492100 + 159492080 159492120 41 AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGCTT AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGTTT < 41bp 1 0.789316593729832 1 0.583315074443817 experiment 0.421366812540337 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TTC1 ENSG00000113312 UTR3 Human protein_coding chr5:159492100 chr5:159492118 . . 0 hm6A_associated_SNPs_7924 0 0 1 6 159492099 159492120 mRNA hsa-miR-15b TTC1 miRanda miRanda
14034 chr5 159492118 159492118 1 + C T rs116271667 159492100 + 159492080 159492120 41 AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGCTT AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGTTT < 41bp 1 0.789316593729832 1 0.583315074443817 experiment 0.421366812540337 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TTC1 ENSG00000113312 UTR3 Human protein_coding chr5:159492100 chr5:159492118 . . 0 hm6A_associated_SNPs_7924 0 0 1 6 159492100 159492120 mRNA hsa-miR-195 TTC1 miRanda miRanda
14034 chr5 159492118 159492118 1 + C T rs116271667 159492100 + 159492080 159492120 41 AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGCTT AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGTTT < 41bp 1 0.789316593729832 1 0.583315074443817 experiment 0.421366812540337 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TTC1 ENSG00000113312 UTR3 Human protein_coding chr5:159492100 chr5:159492118 . . 0 hm6A_associated_SNPs_7924 0 0 1 6 159492101 159492120 mRNA hsa-miR-424 TTC1 miRanda miRanda
14034 chr5 159492118 159492118 1 + C T rs116271667 159492100 + 159492080 159492120 41 AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGCTT AACAAAAGCTTTACAAGCTGACTTGGAATTGTGTGCTGTTT < 41bp 1 0.789316593729832 1 0.583315074443817 experiment 0.421366812540337 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TTC1 ENSG00000113312 UTR3 Human protein_coding chr5:159492100 chr5:159492118 . . 0 hm6A_associated_SNPs_7924 0 0 1 6 159492100 159492120 mRNA hsa-miR-497 TTC1 miRanda miRanda
14034 chr5 162868905 162868905 1 + A C rs2069352 162868916 + 162868896 162868936 41 AATAGCATTAATTTTGAAAGACTAGAAGCTCAACTGAAGGC AATAGCATTCATTTTGAAAGACTAGAAGCTCAACTGAAGGC < 41bp 1 0.47856344159149 1 0.0852734744548798 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162868916 chr5:162868905 nonsynonymous SNV 0.781 1 hm6A_associated_SNPs_7928 0 0 1 1 162868892 162868906 mRNA hsa-miR-155 CCNG1 miRanda miRanda
14034 chr5 162945269 162945269 1 + C T rs80145956 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGATCT < 41bp 1 0.727568422677738 1 0.9351567029953 experiment 0.544863154644523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945269 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_7939 0 0 1 2 162945262 162945286 mRNA hsa-miR-182 MAT2B miRanda miRanda
14034 chr5 162945269 162945269 1 + C T rs80145956 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGATCT < 41bp 1 0.727568422677738 1 0.9351567029953 experiment 0.544863154644523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945269 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_7939 0 0 1 2 162945259 162945280 mRNA hsa-miR-365 MAT2B miRanda miRanda
14034 chr5 162945269 162945269 1 + C T rs80145956 162945268 + 162945248 162945288 41 TTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGA TTGACTGCTCCAAATTGGAGATCTTGGGCATTGGCCAACGA Direct Loss 1 0.698732767276385 1 0.950897693634033 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945268 chr5:162945269 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_7940 0 0 1 2 162945262 162945286 mRNA hsa-miR-182 MAT2B miRanda miRanda
14034 chr5 162945269 162945269 1 + C T rs80145956 162945268 + 162945248 162945288 41 TTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGA TTGACTGCTCCAAATTGGAGATCTTGGGCATTGGCCAACGA Direct Loss 1 0.698732767276385 1 0.950897693634033 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945268 chr5:162945269 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_7940 0 0 1 2 162945259 162945280 mRNA hsa-miR-365 MAT2B miRanda miRanda
14034 chr5 167946261 167946261 1 + C A rs2305737 167946272 + 167946252 167946292 41 GCTTTTTTACAATCATGTGGACACAAGCATAAGTAAAGAAA GCTTTTTTAAAATCATGTGGACACAAGCATAAGTAAAGAAA < 41bp 1 0.704687422380522 1 0.437546133995056 experiment 0.590625155238956 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 10 RARS ENSG00000113643 UTR3 Human protein_coding chr5:167946272 chr5:167946261 . . 0 hm6A_associated_SNPs_7949 0 0 1 2 167946246 167946266 mRNA hsa-miR-219-5p RARS miRanda miRanda
14034 chr5 167946261 167946261 1 + C A rs2305737 167946272 + 167946252 167946292 41 GCTTTTTTACAATCATGTGGACACAAGCATAAGTAAAGAAA GCTTTTTTAAAATCATGTGGACACAAGCATAAGTAAAGAAA < 41bp 1 0.704687422380522 1 0.437546133995056 experiment 0.590625155238956 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 10 RARS ENSG00000113643 UTR3 Human protein_coding chr5:167946272 chr5:167946261 . . 0 hm6A_associated_SNPs_7949 0 0 1 2 167946258 167946278 mRNA hsa-miR-599 RARS miRanda miRanda
14034 chr5 167946277 167946277 1 + A G rs139850866 167946272 + 167946252 167946292 41 GCTTTTTTACAATCATGTGGACACAAGCATAAGTAAAGAAA GCTTTTTTACAATCATGTGGACACAGGCATAAGTAAAGAAA < 41bp 1 0.703753358125695 1 0.264309376478195 experiment 0.59249328374861 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 26 RARS ENSG00000113643 UTR3 Human protein_coding chr5:167946272 chr5:167946277 . . 0 hm6A_associated_SNPs_7950 0 0 1 2 167946274 167946296 mRNA hsa-miR-590-3p RARS miRanda miRanda
14034 chr5 167946277 167946277 1 + A G rs139850866 167946272 + 167946252 167946292 41 GCTTTTTTACAATCATGTGGACACAAGCATAAGTAAAGAAA GCTTTTTTACAATCATGTGGACACAGGCATAAGTAAAGAAA < 41bp 1 0.703753358125695 1 0.264309376478195 experiment 0.59249328374861 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 26 RARS ENSG00000113643 UTR3 Human protein_coding chr5:167946272 chr5:167946277 . . 0 hm6A_associated_SNPs_7950 0 0 1 2 167946258 167946278 mRNA hsa-miR-599 RARS miRanda miRanda
14034 chr5 169031311 169031311 1 + A G rs560601094 169031326 + 169031306 169031346 41 TATTTACTCATTGTGCCAGGACCTGGCATTTTCATGTGCCT TATTTGCTCATTGTGCCAGGACCTGGCATTTTCATGTGCCT < 41bp 1 0.29055176370889 1 0.543566465377808 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 6 SPDL1 ENSG00000040275 UTR3 Human protein_coding chr5:169031326 chr5:169031311 . . 0 hm6A_associated_SNPs_7952 0 0 1 1 169031293 169031315 mRNA hsa-miR-539 CCDC99 miRanda miRanda
14034 chr5 169031328 169031328 1 + C T rs187848268 169031326 + 169031306 169031346 41 TATTTACTCATTGTGCCAGGACCTGGCATTTTCATGTGCCT TATTTACTCATTGTGCCAGGACTTGGCATTTTCATGTGCCT < 41bp 1 0.522187614054616 1 0.889830648899078 experiment 0.955624771890769 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 23 SPDL1 ENSG00000040275 UTR3 Human protein_coding chr5:169031326 chr5:169031328 . . 0 hm6A_associated_SNPs_7953 0 0 1 1 169031328 169031348 mRNA hsa-miR-506 CCDC99 miRanda miRanda
14034 chr5 170837598 170837598 1 + A C rs200638434 170837583 + 170837563 170837603 41 TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAAATTTTC TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAACTTTTC < 41bp 1 0.770193038474025 1 0.380460232496262 experiment 0.45961392305195 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NPM1 ENSG00000181163 UTR3 Human protein_coding chr5:170837583 chr5:170837598 . . 0 hm6A_associated_SNPs_7957 0 0 1 6 170837591 170837611 mRNA hsa-miR-208a NPM1 miRanda miRanda
14034 chr5 170837598 170837598 1 + A C rs200638434 170837583 + 170837563 170837603 41 TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAAATTTTC TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAACTTTTC < 41bp 1 0.770193038474025 1 0.380460232496262 experiment 0.45961392305195 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NPM1 ENSG00000181163 UTR3 Human protein_coding chr5:170837583 chr5:170837598 . . 0 hm6A_associated_SNPs_7957 0 0 1 6 170837586 170837608 mRNA hsa-miR-191 NPM1 miRanda miRanda
14034 chr5 170837598 170837598 1 + A C rs200638434 170837583 + 170837563 170837603 41 TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAAATTTTC TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAACTTTTC < 41bp 1 0.770193038474025 1 0.380460232496262 experiment 0.45961392305195 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NPM1 ENSG00000181163 UTR3 Human protein_coding chr5:170837583 chr5:170837598 . . 0 hm6A_associated_SNPs_7957 0 0 1 6 170837588 170837609 mRNA hsa-miR-184 NPM1 miRanda miRanda
14034 chr5 170837598 170837598 1 + A C rs200638434 170837583 + 170837563 170837603 41 TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAAATTTTC TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAACTTTTC < 41bp 1 0.770193038474025 1 0.380460232496262 experiment 0.45961392305195 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NPM1 ENSG00000181163 UTR3 Human protein_coding chr5:170837583 chr5:170837598 . . 0 hm6A_associated_SNPs_7957 0 0 1 6 170837591 170837611 mRNA hsa-miR-499-5p NPM1 miRanda miRanda
14034 chr5 170837598 170837598 1 + A C rs200638434 170837583 + 170837563 170837603 41 TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAAATTTTC TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAACTTTTC < 41bp 1 0.770193038474025 1 0.380460232496262 experiment 0.45961392305195 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NPM1 ENSG00000181163 UTR3 Human protein_coding chr5:170837583 chr5:170837598 . . 0 hm6A_associated_SNPs_7957 0 0 1 6 170837582 170837601 mRNA hsa-miR-590-3p NPM1 miRanda miRanda
14034 chr5 170837598 170837598 1 + A C rs200638434 170837583 + 170837563 170837603 41 TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAAATTTTC TCTTTAAGAAAATAGTTTAAACAATTTGTTAAAAACTTTTC < 41bp 1 0.770193038474025 1 0.380460232496262 experiment 0.45961392305195 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 NPM1 ENSG00000181163 UTR3 Human protein_coding chr5:170837583 chr5:170837598 . . 0 hm6A_associated_SNPs_7957 0 0 1 6 170837591 170837611 mRNA hsa-miR-208b NPM1 miRanda miRanda
14034 chr5 172378922 172378922 1 + G A rs147158105 172378934 + 172378914 172378954 41 CAGCCATCGTGGCCCACTTGACACTGTGCTCCTCCATCAGC CAGCCATCATGGCCCACTTGACACTGTGCTCCTCCATCAGC < 41bp 1 0.103164819847517 1 0.75981342792511 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ERGIC1 ENSG00000113719 UTR3 Human protein_coding chr5:172378934 chr5:172378922 . . 0 hm6A_associated_SNPs_7962 0 0 1 1 172378920 172378942 mRNA hsa-miR-128 ERGIC1 miRanda miRanda
14034 chr5 172461572 172461572 1 + C G rs146948215 172461584 + 172461564 172461604 41 GTGAATTACGTGCCTCCATAACCTGAACTGTGCCGACTCCA GTGAATTAGGTGCCTCCATAACCTGAACTGTGCCGACTCCA < 41bp 1 0.686434772893807 1 0.961287796497345 experiment 0.627130454212386 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 9 ATP6V0E1 ENSG00000113732 UTR3 Human protein_coding chr5:172461584 chr5:172461572 . . 0 hm6A_associated_SNPs_7963 0 0 1 1 172461568 172461588 mRNA hsa-miR-154 ATP6V0E1 miRanda miRanda
14034 chr5 172461573 172461573 1 + G A rs73806203 172461584 + 172461564 172461604 41 GTGAATTACGTGCCTCCATAACCTGAACTGTGCCGACTCCA GTGAATTACATGCCTCCATAACCTGAACTGTGCCGACTCCA < 41bp 1 0.680917295008994 1 0.969008564949036 experiment 0.638165409982013 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 ATP6V0E1 ENSG00000113732 UTR3 Human protein_coding chr5:172461584 chr5:172461573 . . 0 hm6A_associated_SNPs_7964 0 0 1 1 172461568 172461588 mRNA hsa-miR-154 ATP6V0E1 miRanda miRanda
14034 chr5 174157636 174157636 1 + T C rs184931219 174157631 + 174157611 174157651 41 GTACCTGTTGTATGTCCTAAACTTATTAGAAAATTTTATAT GTACCTGTTGTATGTCCTAAACTTACTAGAAAATTTTATAT < 41bp 1 0.0253315673925167 1 0.0243465006351471 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 MSX2 ENSG00000120149 UTR3 Human protein_coding chr5:174157631 chr5:174157636 . . 0 hm6A_associated_SNPs_7974 0 0 1 3 174157625 174157651 mRNA hsa-miR-340 MSX2 miRanda miRanda
14034 chr5 174157636 174157636 1 + T C rs184931219 174157631 + 174157611 174157651 41 GTACCTGTTGTATGTCCTAAACTTATTAGAAAATTTTATAT GTACCTGTTGTATGTCCTAAACTTACTAGAAAATTTTATAT < 41bp 1 0.0253315673925167 1 0.0243465006351471 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 MSX2 ENSG00000120149 UTR3 Human protein_coding chr5:174157631 chr5:174157636 . . 0 hm6A_associated_SNPs_7974 0 0 1 3 174157632 174157652 mRNA hsa-miR-410 MSX2 miRanda miRanda
14034 chr5 174157636 174157636 1 + T C rs184931219 174157631 + 174157611 174157651 41 GTACCTGTTGTATGTCCTAAACTTATTAGAAAATTTTATAT GTACCTGTTGTATGTCCTAAACTTACTAGAAAATTTTATAT < 41bp 1 0.0253315673925167 1 0.0243465006351471 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 MSX2 ENSG00000120149 UTR3 Human protein_coding chr5:174157631 chr5:174157636 . . 0 hm6A_associated_SNPs_7974 0 0 1 3 174157627 174157646 mRNA hsa-miR-590-3p MSX2 miRanda miRanda
14034 chr5 174954852 174954852 1 + A G rs370961730 174954856 + 174954836 174954876 41 GTAGATGTTTAACGTCATAGACAGTTGGCCCTCTGTATCCG GTAGATGTTTAACGTCGTAGACAGTTGGCCCTCTGTATCCG < 41bp 1 0.263959639605721 1 0.0126306712627411 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174954856 chr5:174954852 . . 0 hm6A_associated_SNPs_7976 0 0 1 1 174954852 174954875 mRNA hsa-miR-383 SFXN1 miRanda miRanda
14034 chr5 174954861 174954861 1 + T C rs156373 174954856 + 174954836 174954876 41 GTAGATGTTTAACGTCATAGACAGTTGGCCCTCTGTATCCG GTAGATGTTTAACGTCATAGACAGTCGGCCCTCTGTATCCG < 41bp 1 0.333041540851951 1 0.0478525757789612 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 26 SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174954856 chr5:174954861 . . 0 hm6A_associated_SNPs_7977 0 0 1 1 174954852 174954875 mRNA hsa-miR-383 SFXN1 miRanda miRanda
14034 chr5 175772202 175772202 1 + C T rs114998835 175772187 + 175772167 175772207 41 ACTTTTTTCCCTCTTGCAGAACACTTAAGGAGTTCCGTGAT ACTTTTTTCCCTCTTGCAGAACACTTAAGGAGTTCTGTGAT < 41bp 1 0.445948958297843 1 0.990445375442505 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175772187 chr5:175772202 synonymous SNV . 0 hm6A_associated_SNPs_7984 0 0 1 1 175772186 175772206 mRNA hsa-miR-873 C5orf25 miRanda miRanda
14034 chr5 175936317 175936317 1 + C A rs10516139 175936326 + 175936306 175936346 41 AATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGA AATCTGTGTTAATCCTAAGGACTTTTGGGATTTTGATGAGA < 41bp 1 0.789549919333631 1 0.97639000415802 experiment 0.420900161332738 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 FAF2 ENSG00000113194 UTR3 Human protein_coding chr5:175936326 chr5:175936317 . . 0 hm6A_associated_SNPs_7994 0 0 1 1 175936296 175936318 mRNA hsa-miR-30e FAF2 miRanda miRanda
14034 chr5 175936709 175936709 1 + A T rs143416326 175936695 + 175936675 175936715 41 TAAGAGATGGCCAGAGGATAACACTTGTCTCTTAAAAACTA TAAGAGATGGCCAGAGGATAACACTTGTCTCTTATAAACTA < 41bp 1 0.570019617640465 1 0.943480134010315 experiment 0.85996076471907 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 FAF2 ENSG00000113194 UTR3 Human protein_coding chr5:175936695 chr5:175936709 . . 0 hm6A_associated_SNPs_8002 0 0 1 1 175936698 175936720 mRNA hsa-miR-590-5p FAF2 miRanda miRanda
14034 chr5 175936709 175936709 1 + A T rs143416326 175936712 + 175936692 175936732 41 ATAACACTTGTCTCTTAAAAACTAAGCTAAAAAGAACCTAG ATAACACTTGTCTCTTATAAACTAAGCTAAAAAGAACCTAG < 41bp 1 0.501154138481261 1 0.977139353752136 experiment 0.997691723037478 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 FAF2 ENSG00000113194 UTR3 Human protein_coding chr5:175936712 chr5:175936709 . . 0 hm6A_associated_SNPs_8003 0 0 1 1 175936698 175936720 mRNA hsa-miR-590-5p FAF2 miRanda miRanda
14034 chr5 175936709 175936709 1 + A T rs143416326 175936727 + 175936707 175936747 41 TAAAAACTAAGCTAAAAAGAACCTAGAACCTTCAATTGAGC TATAAACTAAGCTAAAAAGAACCTAGAACCTTCAATTGAGC < 41bp 1 0.502901163526653 1 0.98260086774826 experiment 0.994197672946694 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 FAF2 ENSG00000113194 UTR3 Human protein_coding chr5:175936727 chr5:175936709 . . 0 hm6A_associated_SNPs_8004 0 0 1 1 175936698 175936720 mRNA hsa-miR-590-5p FAF2 miRanda miRanda
14034 chr5 176307010 176307010 1 + G A rs78360018 176306992 + 176306972 176307012 41 CACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAA CACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCAAA < 41bp 1 0.609143093180524 1 0.987774908542633 experiment 0.781713813638953 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 39 UNC5A ENSG00000113763 UTR3 Human protein_coding chr5:176306992 chr5:176307010 . . 0 hm6A_associated_SNPs_8016 0 0 0 1 176307009 176307031 mRNA hsa-miR-338-3p UNC5A miRanda miRanda
14034 chr5 176733670 176733670 1 - C G rs535690572 176733669 - 176733649 176733689 41 ACCCACCACGTAGACAGCAGACAGGGCTGGAAGTTGATTTT ACCCACCACGTAGACAGCACACAGGGCTGGAAGTTGATTTT Direct Loss 1 0.222377534051175 1 0.589758336544037 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 20 MXD3;PRELID1 ENSG00000169230;ENSG00000213347 UTR3 Human other chr5:176733669 chr5:176733670 . . 0 hm6A_associated_SNPs_8022 0 0 0 1 176733663 176733685 mRNA hsa-miR-339-5p MXD3 miRanda miRanda
14034 chr5 176733670 176733670 1 - C G rs535690572 176733676 - 176733656 176733696 41 CCCCACAACCCACCACGTAGACAGCAGACAGGGCTGGAAGT CCCCACAACCCACCACGTAGACAGCACACAGGGCTGGAAGT < 41bp 1 0.248983175281727 1 0.711073458194733 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 27 MXD3;PRELID1 ENSG00000169230;ENSG00000213347 UTR3 Human other chr5:176733676 chr5:176733670 . . 0 hm6A_associated_SNPs_8023 0 0 0 1 176733663 176733685 mRNA hsa-miR-339-5p MXD3 miRanda miRanda
14034 chr5 176733681 176733681 1 - G A rs187250820 176733669 - 176733649 176733689 41 ACCCACCACGTAGACAGCAGACAGGGCTGGAAGTTGATTTT ACCCACCATGTAGACAGCAGACAGGGCTGGAAGTTGATTTT < 41bp 1 0.233693168361518 1 0.570921838283539 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 9 MXD3;PRELID1 ENSG00000169230;ENSG00000213347 UTR3 Human other chr5:176733669 chr5:176733681 . . 0 hm6A_associated_SNPs_8024 0 0 0 1 176733663 176733685 mRNA hsa-miR-339-5p MXD3 miRanda miRanda
14034 chr5 176733681 176733681 1 - G A rs187250820 176733676 - 176733656 176733696 41 CCCCACAACCCACCACGTAGACAGCAGACAGGGCTGGAAGT CCCCACAACCCACCATGTAGACAGCAGACAGGGCTGGAAGT < 41bp 1 0.257845919480009 1 0.706240773200989 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 16 MXD3;PRELID1 ENSG00000169230;ENSG00000213347 UTR3 Human other chr5:176733676 chr5:176733681 . . 0 hm6A_associated_SNPs_8025 0 0 0 1 176733663 176733685 mRNA hsa-miR-339-5p MXD3 miRanda miRanda
14034 chr5 176869611 176869611 1 + A G rs186690107 176869600 + 176869580 176869620 41 CATTCCGGACTCCCCTCATAACAATAGACACATGTGCCCAG CATTCCGGACTCCCCTCATAACAATAGACACGTGTGCCCAG < 41bp 1 0.687521660735971 1 0.720290184020996 experiment 0.624956678528058 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 PRR7-AS1 ENSG00000246334 ncRNA_intronic Human antisense chr5:176869600 chr5:176869611 . . 0 hm6A_associated_SNPs_8026 0 0 1 1 176869605 176869626 mRNA hsa-miR-137 GRK6 miRanda miRanda
14034 chr5 177036788 177036788 1 + T A rs138853091 177036782 + 177036762 177036802 41 AGGTCGTGGGCCCAGCTCTGACAGGATGTGGAGTGGCCAGG AGGTCGTGGGCCCAGCTCTGACAGGAAGTGGAGTGGCCAGG < 41bp 1 0.770226686348759 1 0.833481907844543 experiment 0.459546627302482 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 B4GALT7 ENSG00000027847 UTR3 Human protein_coding chr5:177036782 chr5:177036788 . . 0 hm6A_associated_SNPs_8029 0 0 1 3 177036786 177036808 mRNA hsa-miR-133a B4GALT7 miRanda miRanda
14034 chr5 177036788 177036788 1 + T A rs138853091 177036782 + 177036762 177036802 41 AGGTCGTGGGCCCAGCTCTGACAGGATGTGGAGTGGCCAGG AGGTCGTGGGCCCAGCTCTGACAGGAAGTGGAGTGGCCAGG < 41bp 1 0.770226686348759 1 0.833481907844543 experiment 0.459546627302482 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 B4GALT7 ENSG00000027847 UTR3 Human protein_coding chr5:177036782 chr5:177036788 . . 0 hm6A_associated_SNPs_8029 0 0 1 3 177036778 177036801 mRNA hsa-miR-328 B4GALT7 miRanda miRanda
14034 chr5 177036788 177036788 1 + T A rs138853091 177036782 + 177036762 177036802 41 AGGTCGTGGGCCCAGCTCTGACAGGATGTGGAGTGGCCAGG AGGTCGTGGGCCCAGCTCTGACAGGAAGTGGAGTGGCCAGG < 41bp 1 0.770226686348759 1 0.833481907844543 experiment 0.459546627302482 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 B4GALT7 ENSG00000027847 UTR3 Human protein_coding chr5:177036782 chr5:177036788 . . 0 hm6A_associated_SNPs_8029 0 0 1 3 177036786 177036808 mRNA hsa-miR-133b B4GALT7 miRanda miRanda
14034 chr5 177036788 177036788 1 + T A rs138853091 177036803 + 177036783 177036823 41 CAGGATGTGGAGTGGCCAGGACCAAGACAGCAAGCTACGCA CAGGAAGTGGAGTGGCCAGGACCAAGACAGCAAGCTACGCA < 41bp 1 0.774162519570117 1 0.834895253181458 experiment 0.451674960859766 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 B4GALT7 ENSG00000027847 UTR3 Human protein_coding chr5:177036803 chr5:177036788 . . 0 hm6A_associated_SNPs_8030 0 0 1 3 177036786 177036808 mRNA hsa-miR-133a B4GALT7 miRanda miRanda
14034 chr5 177036788 177036788 1 + T A rs138853091 177036803 + 177036783 177036823 41 CAGGATGTGGAGTGGCCAGGACCAAGACAGCAAGCTACGCA CAGGAAGTGGAGTGGCCAGGACCAAGACAGCAAGCTACGCA < 41bp 1 0.774162519570117 1 0.834895253181458 experiment 0.451674960859766 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 B4GALT7 ENSG00000027847 UTR3 Human protein_coding chr5:177036803 chr5:177036788 . . 0 hm6A_associated_SNPs_8030 0 0 1 3 177036778 177036801 mRNA hsa-miR-328 B4GALT7 miRanda miRanda
14034 chr5 177036788 177036788 1 + T A rs138853091 177036803 + 177036783 177036823 41 CAGGATGTGGAGTGGCCAGGACCAAGACAGCAAGCTACGCA CAGGAAGTGGAGTGGCCAGGACCAAGACAGCAAGCTACGCA < 41bp 1 0.774162519570117 1 0.834895253181458 experiment 0.451674960859766 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 B4GALT7 ENSG00000027847 UTR3 Human protein_coding chr5:177036803 chr5:177036788 . . 0 hm6A_associated_SNPs_8030 0 0 1 3 177036786 177036808 mRNA hsa-miR-133b B4GALT7 miRanda miRanda
14034 chr5 177036888 177036888 1 + G A rs149337593 177036868 + 177036848 177036888 41 CAGGCTTGGGCTGGGCCAGGACACGTGGGGTGCCTGGGACG CAGGCTTGGGCTGGGCCAGGACACGTGGGGTGCCTGGGACA < 41bp 1 0.760046135703744 1 0.936662495136261 experiment 0.479907728592511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 41 B4GALT7 ENSG00000027847 UTR3 Human protein_coding chr5:177036868 chr5:177036888 . . 0 hm6A_associated_SNPs_8032 0 0 1 1 177036872 177036894 mRNA hsa-miR-503 B4GALT7 miRanda miRanda
14034 chr5 179036694 179036694 1 + G A rs10072198 179036695 + 179036675 179036715 41 GCAGCTCTCACCTTTCTGTGACTTGTTCGGAATTAACTCCT GCAGCTCTCACCTTTCTGTAACTTGTTCGGAATTAACTCCT < 41bp 1 0.246626833420473 1 0.987901508808136 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 20 RUFY1 ENSG00000176783 UTR3 Human protein_coding chr5:179036695 chr5:179036694 . . 0 hm6A_associated_SNPs_8045 0 0 1 2 179036678 179036699 mRNA hsa-miR-224 RUFY1 miRanda miRanda
14034 chr5 179036694 179036694 1 + G A rs10072198 179036695 + 179036675 179036715 41 GCAGCTCTCACCTTTCTGTGACTTGTTCGGAATTAACTCCT GCAGCTCTCACCTTTCTGTAACTTGTTCGGAATTAACTCCT < 41bp 1 0.246626833420473 1 0.987901508808136 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 20 RUFY1 ENSG00000176783 UTR3 Human protein_coding chr5:179036695 chr5:179036694 . . 0 hm6A_associated_SNPs_8045 0 0 1 2 179036682 179036702 mRNA hsa-miR-132 RUFY1 miRanda miRanda
14034 chr5 179036694 179036694 1 + G A rs10072198 179036710 + 179036690 179036730 41 CTGTGACTTGTTCGGAATTAACTCCTCTGGATGGAAACTTC CTGTAACTTGTTCGGAATTAACTCCTCTGGATGGAAACTTC < 41bp 1 0.313621751916148 1 0.990464210510254 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 5 RUFY1 ENSG00000176783 UTR3 Human protein_coding chr5:179036710 chr5:179036694 . . 0 hm6A_associated_SNPs_8046 0 0 1 2 179036678 179036699 mRNA hsa-miR-224 RUFY1 miRanda miRanda
14034 chr5 179036694 179036694 1 + G A rs10072198 179036710 + 179036690 179036730 41 CTGTGACTTGTTCGGAATTAACTCCTCTGGATGGAAACTTC CTGTAACTTGTTCGGAATTAACTCCTCTGGATGGAAACTTC < 41bp 1 0.313621751916148 1 0.990464210510254 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 5 RUFY1 ENSG00000176783 UTR3 Human protein_coding chr5:179036710 chr5:179036694 . . 0 hm6A_associated_SNPs_8046 0 0 1 2 179036682 179036702 mRNA hsa-miR-132 RUFY1 miRanda miRanda
14034 chr5 179157777 179157777 1 + A C rs41285555 179157763 + 179157743 179157783 41 AGCTTTCAGCTCTTAAAAAGACACTTATATTTTGATTTTAC AGCTTTCAGCTCTTAAAAAGACACTTATATTTTGCTTTTAC < 41bp 1 0.415946247675331 1 0.0724666714668274 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 35 CANX ENSG00000127022 UTR3 Human protein_coding chr5:179157763 chr5:179157777 . . 0 hm6A_associated_SNPs_8052 0 0 1 1 179157770 179157791 mRNA hsa-miR-338-3p CANX miRanda miRanda
14034 chr5 180651311 180651311 1 + G A rs371992839 180651324 + 180651304 180651344 41 AAGAAGAGGGTGTGTTCTGGACCAGTGGCATGAGCAGGTCC AAGAAGAAGGTGTGTTCTGGACCAGTGGCATGAGCAGGTCC < 41bp 1 0.70495593036837 1 0.997091114521027 experiment 0.59008813926326 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651324 chr5:180651311 synonymous SNV . 0 hm6A_associated_SNPs_8090 0 0 1 2 180651297 180651319 mRNA hsa-miR-362-3p TRIM41 miRanda miRanda
14034 chr5 180651311 180651311 1 + G A rs371992839 180651324 + 180651304 180651344 41 AAGAAGAGGGTGTGTTCTGGACCAGTGGCATGAGCAGGTCC AAGAAGAAGGTGTGTTCTGGACCAGTGGCATGAGCAGGTCC < 41bp 1 0.70495593036837 1 0.997091114521027 experiment 0.59008813926326 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651324 chr5:180651311 synonymous SNV . 0 hm6A_associated_SNPs_8090 0 0 1 2 180651297 180651319 mRNA hsa-miR-329 TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662329 180662349 mRNA hsa-let-7a TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662329 180662349 mRNA hsa-let-7b TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662329 180662349 mRNA hsa-let-7c TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662329 180662349 mRNA hsa-let-7d TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662329 180662349 mRNA hsa-let-7e TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662329 180662349 mRNA hsa-let-7f TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662329 180662349 mRNA hsa-miR-98 TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662327 180662349 mRNA hsa-let-7g TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662328 180662349 mRNA hsa-let-7i TRIM41 miRanda miRanda
14034 chr5 180662331 180662331 1 + G A rs185246376 180662320 + 180662300 180662340 41 CTGGGGAGGAGGGATTCTAAACTTTCCTTCCGTCCTCAATT CTGGGGAGGAGGGATTCTAAACTTTCCTTCCATCCTCAATT < 41bp 1 0.365072591336832 1 0.00173041224479675 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TRIM41 ENSG00000146063 UTR3 Human protein_coding chr5:180662320 chr5:180662331 . . 0 hm6A_associated_SNPs_8092 0 0 1 10 180662313 180662335 mRNA hsa-miR-184 TRIM41 miRanda miRanda
14034 chr6 4044109 4044109 1 + G A rs12195092 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT GCCCCCAAAGCAGTACGAGAACACGATCACCATCTCCAGAT < 41bp 1 0.729908860725595 1 0.889747858047485 experiment 0.540182278548811 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044109 synonymous SNV . 0 hm6A_associated_SNPs_8123 0 0 1 3 4044105 4044127 mRNA hsa-miR-187 PRPF4B miRanda miRanda
14034 chr6 4044109 4044109 1 + G A rs12195092 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT GCCCCCAAAGCAGTACGAGAACACGATCACCATCTCCAGAT < 41bp 1 0.729908860725595 1 0.889747858047485 experiment 0.540182278548811 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044109 synonymous SNV . 0 hm6A_associated_SNPs_8123 0 0 1 3 4044088 4044112 mRNA hsa-miR-330-5p PRPF4B miRanda miRanda
14034 chr6 4044109 4044109 1 + G A rs12195092 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT GCCCCCAAAGCAGTACGAGAACACGATCACCATCTCCAGAT < 41bp 1 0.729908860725595 1 0.889747858047485 experiment 0.540182278548811 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044109 synonymous SNV . 0 hm6A_associated_SNPs_8123 0 0 1 3 4044093 4044112 mRNA hsa-miR-326 PRPF4B miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955308 4955329 mRNA hsa-let-7a CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955307 4955329 mRNA hsa-let-7b CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955309 4955329 mRNA hsa-let-7c CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955308 4955329 mRNA hsa-let-7d CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955308 4955329 mRNA hsa-let-7e CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955308 4955329 mRNA hsa-let-7f CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955305 4955329 mRNA hsa-miR-98 CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955307 4955328 mRNA hsa-miR-196a CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955308 4955329 mRNA hsa-let-7g CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955308 4955329 mRNA hsa-let-7i CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955307 4955328 mRNA hsa-miR-196b CDYL miRanda miRanda
14034 chr6 4955326 4955326 1 + C G rs563960952 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACGTTATATTCAACATTT < 41bp 1 0.282239636464158 1 0.817460060119629 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955326 . . 0 hm6A_associated_SNPs_8130 0 0 1 12 4955318 4955339 mRNA hsa-miR-653 CDYL miRanda miRanda
14034 chr6 4955337 4955337 1 + C T rs115955958 4955321 + 4955301 4955341 41 TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAACATTT TCCTTTCAAAACAAAAAAGAACTACCTTATATTCAATATTT < 41bp 1 0.277552753711348 1 0.754166841506958 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4955321 chr6:4955337 . . 0 hm6A_associated_SNPs_8131 0 0 1 1 4955318 4955339 mRNA hsa-miR-653 CDYL miRanda miRanda
14034 chr6 7586150 7586150 1 + T C rs145079869 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTCATATGAATTTCC < 41bp 1 0.710447708187461 1 0.530899524688721 experiment 0.579104583625077 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586150 . . 0 hm6A_associated_SNPs_8162 4 0 1 7 7586146 7586168 mRNA hsa-miR-17 DSP miRanda miRanda
14034 chr6 7586150 7586150 1 + T C rs145079869 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTCATATGAATTTCC < 41bp 1 0.710447708187461 1 0.530899524688721 experiment 0.579104583625077 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586150 . . 0 hm6A_associated_SNPs_8162 4 0 1 7 7586146 7586168 mRNA hsa-miR-20a DSP miRanda miRanda
14034 chr6 7586150 7586150 1 + T C rs145079869 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTCATATGAATTTCC < 41bp 1 0.710447708187461 1 0.530899524688721 experiment 0.579104583625077 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586150 . . 0 hm6A_associated_SNPs_8162 4 0 1 7 7586145 7586168 mRNA hsa-miR-93 DSP miRanda miRanda
14034 chr6 7586150 7586150 1 + T C rs145079869 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTCATATGAATTTCC < 41bp 1 0.710447708187461 1 0.530899524688721 experiment 0.579104583625077 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586150 . . 0 hm6A_associated_SNPs_8162 4 0 1 7 7586146 7586168 mRNA hsa-miR-106a DSP miRanda miRanda
14034 chr6 7586150 7586150 1 + T C rs145079869 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTCATATGAATTTCC < 41bp 1 0.710447708187461 1 0.530899524688721 experiment 0.579104583625077 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586150 . . 0 hm6A_associated_SNPs_8162 4 0 1 7 7586148 7586168 mRNA hsa-miR-106b DSP miRanda miRanda
14034 chr6 7586150 7586150 1 + T C rs145079869 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTCATATGAATTTCC < 41bp 1 0.710447708187461 1 0.530899524688721 experiment 0.579104583625077 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586150 . . 0 hm6A_associated_SNPs_8162 4 0 1 7 7586146 7586168 mRNA hsa-miR-20b DSP miRanda miRanda
14034 chr6 7586150 7586150 1 + T C rs145079869 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTCATATGAATTTCC < 41bp 1 0.710447708187461 1 0.530899524688721 experiment 0.579104583625077 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586150 . . 0 hm6A_associated_SNPs_8162 4 0 1 7 7586147 7586168 mRNA hsa-miR-519d DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586146 7586168 mRNA hsa-miR-17 DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586146 7586168 mRNA hsa-miR-20a DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586145 7586168 mRNA hsa-miR-93 DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586146 7586168 mRNA hsa-miR-106a DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586148 7586168 mRNA hsa-miR-106b DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586152 7586171 mRNA hsa-miR-340 DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586146 7586168 mRNA hsa-miR-20b DSP miRanda miRanda
14034 chr6 7586158 7586158 1 + T C rs376397291 7586142 + 7586122 7586162 41 GGAGTGGTTGCTATACCTTGACTTCATTTATATGAATTTCC GGAGTGGTTGCTATACCTTGACTTCATTTATATGAACTTCC < 41bp 1 0.68392004292588 1 0.729342699050903 experiment 0.63215991414824 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSP ENSG00000096696 UTR3 Human protein_coding chr6:7586142 chr6:7586158 . . 0 hm6A_associated_SNPs_8163 4 0 1 8 7586147 7586168 mRNA hsa-miR-519d DSP miRanda miRanda
14034 chr6 7610486 7610486 1 + G A rs2806218 7610489 + 7610469 7610509 41 TTAATAAGTAGCTGACAGTGACAGAAAGATTGGATTTGGAT TTAATAAGTAGCTGACAATGACAGAAAGATTGGATTTGGAT < 41bp 1 0.120028500244529 1 0.0682707726955414 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SNRNP48 ENSG00000168566 UTR3 Human protein_coding chr6:7610489 chr6:7610486 . . 0 hm6A_associated_SNPs_8166 0 0 1 1 7610473 7610495 mRNA hsa-miR-544 SNRNP48 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11134995 + 11134975 11135015 41 TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATAAA TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATACA < 41bp 1 0.282567697789386 1 0.989065885543823 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11134995 chr6:11135014 . . 0 hm6A_associated_SNPs_8185 0 0 1 4 11134998 11135021 mRNA hsa-miR-203 LOC221710 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11134995 + 11134975 11135015 41 TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATAAA TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATACA < 41bp 1 0.282567697789386 1 0.989065885543823 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11134995 chr6:11135014 . . 0 hm6A_associated_SNPs_8185 0 0 1 4 11135006 11135025 mRNA hsa-miR-143 LOC221710 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11134995 + 11134975 11135015 41 TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATAAA TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATACA < 41bp 1 0.282567697789386 1 0.989065885543823 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11134995 chr6:11135014 . . 0 hm6A_associated_SNPs_8185 0 0 1 4 11134990 11135014 mRNA hsa-miR-374a LOC221710 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11134995 + 11134975 11135015 41 TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATAAA TAAAAATAAAGGGAACTGAAACCAAATTGGACTATTATACA < 41bp 1 0.282567697789386 1 0.989065885543823 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11134995 chr6:11135014 . . 0 hm6A_associated_SNPs_8185 0 0 1 4 11134990 11135014 mRNA hsa-miR-374b LOC221710 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11135005 + 11134985 11135025 41 GGGAACTGAAACCAAATTGGACTATTATAAATTTCATCTTA GGGAACTGAAACCAAATTGGACTATTATACATTTCATCTTA < 41bp 1 0.793429263541378 1 0.993927717208862 experiment 0.413141472917244 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 30 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11135005 chr6:11135014 . . 0 hm6A_associated_SNPs_8186 0 0 1 4 11134998 11135021 mRNA hsa-miR-203 LOC221710 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11135005 + 11134985 11135025 41 GGGAACTGAAACCAAATTGGACTATTATAAATTTCATCTTA GGGAACTGAAACCAAATTGGACTATTATACATTTCATCTTA < 41bp 1 0.793429263541378 1 0.993927717208862 experiment 0.413141472917244 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 30 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11135005 chr6:11135014 . . 0 hm6A_associated_SNPs_8186 0 0 1 4 11135006 11135025 mRNA hsa-miR-143 LOC221710 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11135005 + 11134985 11135025 41 GGGAACTGAAACCAAATTGGACTATTATAAATTTCATCTTA GGGAACTGAAACCAAATTGGACTATTATACATTTCATCTTA < 41bp 1 0.793429263541378 1 0.993927717208862 experiment 0.413141472917244 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 30 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11135005 chr6:11135014 . . 0 hm6A_associated_SNPs_8186 0 0 1 4 11134990 11135014 mRNA hsa-miR-374a LOC221710 miRanda miRanda
14034 chr6 11135014 11135014 1 + A C rs79900662 11135005 + 11134985 11135025 41 GGGAACTGAAACCAAATTGGACTATTATAAATTTCATCTTA GGGAACTGAAACCAAATTGGACTATTATACATTTCATCTTA < 41bp 1 0.793429263541378 1 0.993927717208862 experiment 0.413141472917244 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 30 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11135005 chr6:11135014 . . 0 hm6A_associated_SNPs_8186 0 0 1 4 11134990 11135014 mRNA hsa-miR-374b LOC221710 miRanda miRanda
14034 chr6 11135878 11135878 1 + C T rs146781827 11135868 + 11135848 11135888 41 CGTTCTGTGGAAAAATGCAGACATCAATGACTGTGGTTTGA CGTTCTGTGGAAAAATGCAGACATCAATGATTGTGGTTTGA < 41bp 1 0.663990150164327 1 0.993726551532745 experiment 0.672019699671346 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 31 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11135868 chr6:11135878 . . 0 hm6A_associated_SNPs_8188 0 0 1 1 11135861 11135882 mRNA hsa-miR-144 LOC221710 miRanda miRanda
14034 chr6 11135878 11135878 1 + C T rs146781827 11135877 + 11135857 11135897 41 GAAAAATGCAGACATCAATGACTGTGGTTTGAAAAGTGATT GAAAAATGCAGACATCAATGATTGTGGTTTGAAAAGTGATT Direct Loss 1 0.739234564934578 1 0.989750862121582 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11135877 chr6:11135878 . . 0 hm6A_associated_SNPs_8189 0 0 1 1 11135861 11135882 mRNA hsa-miR-144 LOC221710 miRanda miRanda
14034 chr6 11136020 11136020 1 + C T rs184054621 11136004 + 11135984 11136024 41 ATGTGATAAAAATCTGTTTAACTCAAAGCGCTGTTTCAATA ATGTGATAAAAATCTGTTTAACTCAAAGCGCTGTTTTAATA < 41bp 1 0.17759812722161 1 0.855322122573853 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11136004 chr6:11136020 . . 0 hm6A_associated_SNPs_8190 0 0 1 2 11136000 11136021 mRNA hsa-miR-494 LOC221710 miRanda miRanda
14034 chr6 11136020 11136020 1 + C T rs184054621 11136004 + 11135984 11136024 41 ATGTGATAAAAATCTGTTTAACTCAAAGCGCTGTTTCAATA ATGTGATAAAAATCTGTTTAACTCAAAGCGCTGTTTTAATA < 41bp 1 0.17759812722161 1 0.855322122573853 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11136004 chr6:11136020 . . 0 hm6A_associated_SNPs_8190 0 0 1 2 11136016 11136037 mRNA hsa-miR-590-3p LOC221710 miRanda miRanda
14034 chr6 11136121 11136121 1 + A C rs140553143 11136112 + 11136092 11136132 41 GATACATATGGTGCATCTTAACAATTGGTAGTGTCTTAGGT GATACATATGGTGCATCTTAACAATTGGTCGTGTCTTAGGT < 41bp 1 0.124381926239831 1 0.295034259557724 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 SMIM13 ENSG00000224531 UTR3 Human protein_coding chr6:11136112 chr6:11136121 . . 0 hm6A_associated_SNPs_8192 0 0 1 1 11136103 11136126 mRNA hsa-miR-362-3p LOC221710 miRanda miRanda
14034 chr6 12296832 12296832 1 + G A rs150657531 12296819 + 12296799 12296839 41 TTAAATTTGTAAAATGCAAAACTGAATGAAACTGTTACTAC TTAAATTTGTAAAATGCAAAACTGAATGAAACTATTACTAC < 41bp 1 0.214321324391035 1 0.876728773117065 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 EDN1 ENSG00000078401 UTR3 Human protein_coding chr6:12296819 chr6:12296832 . . 0 hm6A_associated_SNPs_8195 0 0 0 3 12296816 12296835 mRNA hsa-miR-212 EDN1 miRanda miRanda
14034 chr6 12296832 12296832 1 + G A rs150657531 12296819 + 12296799 12296839 41 TTAAATTTGTAAAATGCAAAACTGAATGAAACTGTTACTAC TTAAATTTGTAAAATGCAAAACTGAATGAAACTATTACTAC < 41bp 1 0.214321324391035 1 0.876728773117065 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 EDN1 ENSG00000078401 UTR3 Human protein_coding chr6:12296819 chr6:12296832 . . 0 hm6A_associated_SNPs_8195 0 0 0 3 12296814 12296835 mRNA hsa-miR-132 EDN1 miRanda miRanda
14034 chr6 12296832 12296832 1 + G A rs150657531 12296819 + 12296799 12296839 41 TTAAATTTGTAAAATGCAAAACTGAATGAAACTGTTACTAC TTAAATTTGTAAAATGCAAAACTGAATGAAACTATTACTAC < 41bp 1 0.214321324391035 1 0.876728773117065 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 EDN1 ENSG00000078401 UTR3 Human protein_coding chr6:12296819 chr6:12296832 . . 0 hm6A_associated_SNPs_8195 0 0 0 3 12296816 12296837 mRNA hsa-miR-194 EDN1 miRanda miRanda
14034 chr6 13979511 13979511 1 + T C rs372846658 13979496 + 13979476 13979516 41 ATTACAAGTTGGCAAAATAGACTGTTCACAGAAACTAGGCA ATTACAAGTTGGCAAAATAGACTGTTCACAGAAACCAGGCA < 41bp 1 0.0340805665324339 1 0.83788013458252 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 RNF182 ENSG00000180537 UTR3 Human protein_coding chr6:13979496 chr6:13979511 . . 0 hm6A_associated_SNPs_8199 0 0 1 1 13979497 13979521 mRNA hsa-miR-129-5p RNF182 miRanda miRanda
14034 chr6 14136428 14136428 1 + A C rs1050650 14136436 + 14136416 14136456 41 TACGTGAAAATTATTTGAAAACATATAAAGCACTATACAGA TACGTGAAAATTCTTTGAAAACATATAAAGCACTATACAGA < 41bp 1 0.431217164850907 1 0.181673258543015 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 CD83 ENSG00000112149 UTR3 Human protein_coding chr6:14136436 chr6:14136428 . . 0 hm6A_associated_SNPs_8200 0 0 1 1 14136407 14136428 mRNA hsa-miR-590-3p CD83 miRanda miRanda
14034 chr6 14136445 14136445 1 + G A rs139297842 14136436 + 14136416 14136456 41 TACGTGAAAATTATTTGAAAACATATAAAGCACTATACAGA TACGTGAAAATTATTTGAAAACATATAAAACACTATACAGA < 41bp 1 0.461904905681235 1 0.0853610038757324 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CD83 ENSG00000112149 UTR3 Human protein_coding chr6:14136436 chr6:14136445 . . 0 hm6A_associated_SNPs_8201 0 0 1 1 14136430 14136450 mRNA hsa-miR-218 CD83 miRanda miRanda
14034 chr6 16147154 16147154 1 + T C rs185042496 16147149 + 16147129 16147169 41 AGCTACTCCTCACTGCAAAAACATATCCATGCGTAGAATCA AGCTACTCCTCACTGCAAAAACATACCCATGCGTAGAATCA < 41bp 1 0.798968052706208 1 0.487570405006409 experiment 0.402063894587584 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 MYLIP ENSG00000007944 UTR3 Human protein_coding chr6:16147149 chr6:16147154 . . 0 hm6A_associated_SNPs_8209 0 0 1 2 16147135 16147156 mRNA hsa-miR-190 MYLIP miRanda miRanda
14034 chr6 16147154 16147154 1 + T C rs185042496 16147149 + 16147129 16147169 41 AGCTACTCCTCACTGCAAAAACATATCCATGCGTAGAATCA AGCTACTCCTCACTGCAAAAACATACCCATGCGTAGAATCA < 41bp 1 0.798968052706208 1 0.487570405006409 experiment 0.402063894587584 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 MYLIP ENSG00000007944 UTR3 Human protein_coding chr6:16147149 chr6:16147154 . . 0 hm6A_associated_SNPs_8209 0 0 1 2 16147135 16147156 mRNA hsa-miR-190b MYLIP miRanda miRanda
14034 chr6 17609546 17609546 1 + A G rs150680946 17609564 + 17609544 17609584 41 ATATTTTATATAGTTCTATGACTGTTGAAACATCAAGGAGT ATGTTTTATATAGTTCTATGACTGTTGAAACATCAAGGAGT < 41bp 1 0.0681934857262222 1 0.400527983903885 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 FAM8A1 ENSG00000137414 UTR3 Human protein_coding chr6:17609564 chr6:17609546 . . 0 hm6A_associated_SNPs_8212 0 0 1 2 17609545 17609565 mRNA hsa-miR-376a FAM8A1 miRanda miRanda
14034 chr6 17609546 17609546 1 + A G rs150680946 17609564 + 17609544 17609584 41 ATATTTTATATAGTTCTATGACTGTTGAAACATCAAGGAGT ATGTTTTATATAGTTCTATGACTGTTGAAACATCAAGGAGT < 41bp 1 0.0681934857262222 1 0.400527983903885 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 FAM8A1 ENSG00000137414 UTR3 Human protein_coding chr6:17609564 chr6:17609546 . . 0 hm6A_associated_SNPs_8212 0 0 1 2 17609544 17609565 mRNA hsa-miR-376b FAM8A1 miRanda miRanda
14034 chr6 17611478 17611478 1 + T C rs73722989 17611485 + 17611465 17611505 41 AGGATTTGTTCCCTTCAGTGACTTGAGTGTTTTAGTTATGC AGGATTTGTTCCCCTCAGTGACTTGAGTGTTTTAGTTATGC < 41bp 1 0.07932028534682 1 0.0721891224384308 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 FAM8A1 ENSG00000137414 UTR3 Human protein_coding chr6:17611485 chr6:17611478 . . 0 hm6A_associated_SNPs_8214 0 0 1 1 17611469 17611489 mRNA hsa-miR-224 FAM8A1 miRanda miRanda
14034 chr6 17611660 17611660 1 + A G rs76394442 17611640 + 17611620 17611660 41 ATATACTTATCCCTATTAAAACAGGCAGTTGTTTCTTTGAA ATATACTTATCCCTATTAAAACAGGCAGTTGTTTCTTTGAG < 41bp 1 0.0704601336808835 1 0.0713661015033722 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 41 FAM8A1 ENSG00000137414 UTR3 Human protein_coding chr6:17611640 chr6:17611660 . . 0 hm6A_associated_SNPs_8215 0 0 1 2 17611660 17611681 mRNA hsa-miR-200b FAM8A1 miRanda miRanda
14034 chr6 17611660 17611660 1 + A G rs76394442 17611640 + 17611620 17611660 41 ATATACTTATCCCTATTAAAACAGGCAGTTGTTTCTTTGAA ATATACTTATCCCTATTAAAACAGGCAGTTGTTTCTTTGAG < 41bp 1 0.0704601336808835 1 0.0713661015033722 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 41 FAM8A1 ENSG00000137414 UTR3 Human protein_coding chr6:17611640 chr6:17611660 . . 0 hm6A_associated_SNPs_8215 0 0 1 2 17611659 17611681 mRNA hsa-miR-200c FAM8A1 miRanda miRanda
14034 chr6 19839624 19839624 1 + A G rs146408427 19839628 + 19839608 19839648 41 CTTTCTTTGCACGTTCATAAACATTCTACATACGTATTCTC CTTTCTTTGCACGTTCGTAAACATTCTACATACGTATTCTC < 41bp 1 0.425783372493592 1 0.698697328567505 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 ID4 ENSG00000172201 UTR3 Human protein_coding chr6:19839628 chr6:19839624 . . 0 hm6A_associated_SNPs_8216 0 0 1 1 19839612 19839633 mRNA hsa-miR-590-3p ID4 miRanda miRanda
14034 chr6 20492008 20492008 1 + T C rs189929537 20492024 + 20492004 20492044 41 TCTATGAAGGAATAAGTTGGACCAAGGGAAGTCGGGGACGT TCTACGAAGGAATAAGTTGGACCAAGGGAAGTCGGGGACGT < 41bp 1 0.505530210334534 1 0.0484423339366913 experiment 0.988939579330931 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20492024 chr6:20492008 . . 0 hm6A_associated_SNPs_8223 0 0 1 1 20491993 20492014 mRNA hsa-miR-205 E2F3 miRanda miRanda
14034 chr6 20493786 20493786 1 + A G rs146499346 20493798 + 20493778 20493818 41 GTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGAT GTAATATAGTGTAAAAAAAAACAAAAAAAAGCTTTTATGAT < 41bp 1 0.3997434334491 1 0.0260614156723022 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 9 E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20493798 chr6:20493786 . . 0 hm6A_associated_SNPs_8225 0 0 1 1 20493785 20493805 mRNA hsa-miR-129-5p E2F3 miRanda miRanda
14034 chr6 20493799 20493799 1 + C A rs79489313 20493798 + 20493778 20493818 41 GTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGAT GTAATATAATGTAAAAAAAAAAAAAAAAAAGCTTTTATGAT Direct Loss 1 0.386304030439821 1 0.0243725180625916 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20493798 chr6:20493799 . . 0 hm6A_associated_SNPs_8226 0 0 1 5 20493785 20493805 mRNA hsa-miR-129-5p E2F3 miRanda miRanda
14034 chr6 20493799 20493799 1 + C A rs79489313 20493798 + 20493778 20493818 41 GTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGAT GTAATATAATGTAAAAAAAAAAAAAAAAAAGCTTTTATGAT Direct Loss 1 0.386304030439821 1 0.0243725180625916 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20493798 chr6:20493799 . . 0 hm6A_associated_SNPs_8226 0 0 1 5 20493792 20493813 mRNA hsa-miR-320a E2F3 miRanda miRanda
14034 chr6 20493799 20493799 1 + C A rs79489313 20493798 + 20493778 20493818 41 GTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGAT GTAATATAATGTAAAAAAAAAAAAAAAAAAGCTTTTATGAT Direct Loss 1 0.386304030439821 1 0.0243725180625916 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20493798 chr6:20493799 . . 0 hm6A_associated_SNPs_8226 0 0 1 5 20493792 20493813 mRNA hsa-miR-320b E2F3 miRanda miRanda
14034 chr6 20493799 20493799 1 + C A rs79489313 20493798 + 20493778 20493818 41 GTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGAT GTAATATAATGTAAAAAAAAAAAAAAAAAAGCTTTTATGAT Direct Loss 1 0.386304030439821 1 0.0243725180625916 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20493798 chr6:20493799 . . 0 hm6A_associated_SNPs_8226 0 0 1 5 20493794 20493813 mRNA hsa-miR-320c E2F3 miRanda miRanda
14034 chr6 20493799 20493799 1 + C A rs79489313 20493798 + 20493778 20493818 41 GTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGAT GTAATATAATGTAAAAAAAAAAAAAAAAAAGCTTTTATGAT Direct Loss 1 0.386304030439821 1 0.0243725180625916 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20493798 chr6:20493799 . . 0 hm6A_associated_SNPs_8226 0 0 1 5 20493795 20493813 mRNA hsa-miR-320d E2F3 miRanda miRanda
14034 chr6 21596277 21596277 1 + A G rs571459101 21596267 + 21596247 21596287 41 GAAAAAAAGAAACGAAAAGGACAGACGAAGAGTTTAAAGAG GAAAAAAAGAAACGAAAAGGACAGACGAAGGGTTTAAAGAG < 41bp 1 0.668074623738003 1 0.999247968196869 experiment 0.663850752523994 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 SOX4 ENSG00000124766 UTR3 Human protein_coding chr6:21596267 chr6:21596277 . . 0 hm6A_associated_SNPs_8232 0 0 1 2 21596276 21596296 mRNA hsa-miR-204 SOX4 miRanda miRanda
14034 chr6 21596277 21596277 1 + A G rs571459101 21596267 + 21596247 21596287 41 GAAAAAAAGAAACGAAAAGGACAGACGAAGAGTTTAAAGAG GAAAAAAAGAAACGAAAAGGACAGACGAAGGGTTTAAAGAG < 41bp 1 0.668074623738003 1 0.999247968196869 experiment 0.663850752523994 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 SOX4 ENSG00000124766 UTR3 Human protein_coding chr6:21596267 chr6:21596277 . . 0 hm6A_associated_SNPs_8232 0 0 1 2 21596277 21596296 mRNA hsa-miR-211 SOX4 miRanda miRanda
14034 chr6 24423994 24423994 1 + T C rs149405836 24424011 + 24423991 24424031 41 ATTTTCTTGTATAGAGTCAGACACTTGAAAAAAACTAATGT ATTCTCTTGTATAGAGTCAGACACTTGAAAAAAACTAATGT < 41bp 1 0.702255625500105 1 0.770479619503021 experiment 0.59548874899979 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 MRS2 ENSG00000124532 UTR3 Human protein_coding chr6:24424011 chr6:24423994 . . 0 hm6A_associated_SNPs_8243 0 0 1 3 24423982 24424003 mRNA hsa-miR-381 MRS2 miRanda miRanda
14034 chr6 24423994 24423994 1 + T C rs149405836 24424011 + 24423991 24424031 41 ATTTTCTTGTATAGAGTCAGACACTTGAAAAAAACTAATGT ATTCTCTTGTATAGAGTCAGACACTTGAAAAAAACTAATGT < 41bp 1 0.702255625500105 1 0.770479619503021 experiment 0.59548874899979 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 MRS2 ENSG00000124532 UTR3 Human protein_coding chr6:24424011 chr6:24423994 . . 0 hm6A_associated_SNPs_8243 0 0 1 3 24423994 24424017 mRNA hsa-miR-520c-3p MRS2 miRanda miRanda
14034 chr6 24423994 24423994 1 + T C rs149405836 24424011 + 24423991 24424031 41 ATTTTCTTGTATAGAGTCAGACACTTGAAAAAAACTAATGT ATTCTCTTGTATAGAGTCAGACACTTGAAAAAAACTAATGT < 41bp 1 0.702255625500105 1 0.770479619503021 experiment 0.59548874899979 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 MRS2 ENSG00000124532 UTR3 Human protein_coding chr6:24424011 chr6:24423994 . . 0 hm6A_associated_SNPs_8243 0 0 1 3 24423982 24424003 mRNA hsa-miR-300 MRS2 miRanda miRanda
14034 chr6 24424275 24424275 1 + G A rs369255635 24424271 + 24424251 24424291 41 GAATGAAGCGTAGGAACTTGACAAGCCCATAGGTAGCTATA GAATGAAGCGTAGGAACTTGACAAACCCATAGGTAGCTATA < 41bp 1 0.432692368774018 1 0.0624068677425385 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 MRS2 ENSG00000124532 UTR3 Human protein_coding chr6:24424271 chr6:24424275 . . 0 hm6A_associated_SNPs_8244 0 0 1 2 24424256 24424281 mRNA hsa-miR-135a MRS2 miRanda miRanda
14034 chr6 24424275 24424275 1 + G A rs369255635 24424271 + 24424251 24424291 41 GAATGAAGCGTAGGAACTTGACAAGCCCATAGGTAGCTATA GAATGAAGCGTAGGAACTTGACAAACCCATAGGTAGCTATA < 41bp 1 0.432692368774018 1 0.0624068677425385 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 MRS2 ENSG00000124532 UTR3 Human protein_coding chr6:24424271 chr6:24424275 . . 0 hm6A_associated_SNPs_8244 0 0 1 2 24424256 24424281 mRNA hsa-miR-135b MRS2 miRanda miRanda
14034 chr6 24535204 24535204 1 + C T rs573245565 24535214 + 24535194 24535234 41 ATTCAAATAACGCACAAAAAACAAAAGCCGCTATGACCGGC ATTCAAATAATGCACAAAAAACAAAAGCCGCTATGACCGGC < 41bp 1 0.126303943604296 1 0.803078353404999 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ALDH5A1 ENSG00000112294 UTR3 Human protein_coding chr6:24535214 chr6:24535204 . . 0 hm6A_associated_SNPs_8253 0 0 1 1 24535189 24535210 mRNA hsa-miR-210 ALDH5A1 miRanda miRanda
14034 chr6 24535208 24535208 1 + C A rs12190214 24535214 + 24535194 24535234 41 ATTCAAATAACGCACAAAAAACAAAAGCCGCTATGACCGGC ATTCAAATAACGCAAAAAAAACAAAAGCCGCTATGACCGGC < 41bp 1 0.118875410121126 1 0.804001569747925 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 ALDH5A1 ENSG00000112294 UTR3 Human protein_coding chr6:24535214 chr6:24535208 . . 0 hm6A_associated_SNPs_8254 1 0 1 1 24535189 24535210 mRNA hsa-miR-210 ALDH5A1 miRanda miRanda
14034 chr6 24536677 24536677 1 + G A rs146569813 24536689 + 24536669 24536709 41 GTTGAATAGTTGGGACAGGGACAGTATAGCCTGCAAAGCCT GTTGAATAATTGGGACAGGGACAGTATAGCCTGCAAAGCCT < 41bp 1 0.256889887414539 1 0.900691866874695 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ALDH5A1 ENSG00000112294 UTR3 Human protein_coding chr6:24536689 chr6:24536677 . . 0 hm6A_associated_SNPs_8259 0 0 1 2 24536669 24536689 mRNA hsa-miR-339-5p ALDH5A1 miRanda miRanda
14034 chr6 24536677 24536677 1 + G A rs146569813 24536689 + 24536669 24536709 41 GTTGAATAGTTGGGACAGGGACAGTATAGCCTGCAAAGCCT GTTGAATAATTGGGACAGGGACAGTATAGCCTGCAAAGCCT < 41bp 1 0.256889887414539 1 0.900691866874695 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ALDH5A1 ENSG00000112294 UTR3 Human protein_coding chr6:24536689 chr6:24536677 . . 0 hm6A_associated_SNPs_8259 0 0 1 2 24536670 24536692 mRNA hsa-miR-874 ALDH5A1 miRanda miRanda
14034 chr6 24701860 24701860 1 + C G rs144752694 24701848 + 24701828 24701868 41 ACACCTGGGAAACTGAGAGAACAGCAGAATGACCTAAAGAA ACACCTGGGAAACTGAGAGAACAGCAGAATGAGCTAAAGAA < 41bp 1 0.753434161714294 1 0.782180666923523 experiment 0.493131676571411 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 ACOT13 ENSG00000272345 ncRNA_exonic Human antisense chr6:24701848 chr6:24701860 . . 0 hm6A_associated_SNPs_8266 0 0 1 1 24701844 24701867 mRNA hsa-miR-9 ACOT13 miRanda miRanda
14034 chr6 24701860 24701860 1 + C G rs144752694 24701859 + 24701839 24701879 41 ACTGAGAGAACAGCAGAATGACCTAAAGAAACCCAACAATG ACTGAGAGAACAGCAGAATGAGCTAAAGAAACCCAACAATG Direct Loss 1 0.485912264883926 1 0.829609811306 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ACOT13 ENSG00000272345 ncRNA_exonic Human antisense chr6:24701859 chr6:24701860 . . 0 hm6A_associated_SNPs_8267 0 0 1 1 24701844 24701867 mRNA hsa-miR-9 ACOT13 miRanda miRanda
14034 chr6 24701860 24701860 1 + C G rs144752694 24701869 + 24701849 24701889 41 CAGCAGAATGACCTAAAGAAACCCAACAATGAATATCAAGT CAGCAGAATGAGCTAAAGAAACCCAACAATGAATATCAAGT < 41bp 1 0.258356687754495 1 0.714340448379517 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 ACOT13 ENSG00000272345 ncRNA_exonic Human antisense chr6:24701869 chr6:24701860 . . 0 hm6A_associated_SNPs_8268 0 0 1 1 24701844 24701867 mRNA hsa-miR-9 ACOT13 miRanda miRanda
14034 chr6 24786271 24786271 1 + C T rs2307309 24786290 + 24786270 24786310 41 CCTGTTGAACATTGTGTATAACTTAGAATAATGAAATATAA CTTGTTGAACATTGTGTATAACTTAGAATAATGAAATATAA < 41bp 1 0.052028885191241 1 0.368942141532898 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 GMNN ENSG00000112312 UTR3 Human protein_coding chr6:24786290 chr6:24786271 . . 0 hm6A_associated_SNPs_8271 0 0 1 1 24786254 24786276 mRNA hsa-miR-421 GMNN miRanda miRanda
14034 chr6 25984505 25984505 1 + G A rs148162948 25984525 + 25984505 25984545 41 GGAATTATGAGTAAAATTGAACTTTGATGGGGGATTCAGTT AGAATTATGAGTAAAATTGAACTTTGATGGGGGATTCAGTT < 41bp 1 0.606815345886732 1 0.0961126387119293 experiment 0.786369308226535 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 TRIM38 ENSG00000272558 ncRNA_intronic Human antisense chr6:25984525 chr6:25984505 . . 0 hm6A_associated_SNPs_8279 0 0 0 3 25984488 25984508 mRNA hsa-miR-204 TRIM38 miRanda miRanda
14034 chr6 25984505 25984505 1 + G A rs148162948 25984525 + 25984505 25984545 41 GGAATTATGAGTAAAATTGAACTTTGATGGGGGATTCAGTT AGAATTATGAGTAAAATTGAACTTTGATGGGGGATTCAGTT < 41bp 1 0.606815345886732 1 0.0961126387119293 experiment 0.786369308226535 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 TRIM38 ENSG00000272558 ncRNA_intronic Human antisense chr6:25984525 chr6:25984505 . . 0 hm6A_associated_SNPs_8279 0 0 0 3 25984488 25984508 mRNA hsa-miR-211 TRIM38 miRanda miRanda
14034 chr6 25984505 25984505 1 + G A rs148162948 25984525 + 25984505 25984545 41 GGAATTATGAGTAAAATTGAACTTTGATGGGGGATTCAGTT AGAATTATGAGTAAAATTGAACTTTGATGGGGGATTCAGTT < 41bp 1 0.606815345886732 1 0.0961126387119293 experiment 0.786369308226535 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 TRIM38 ENSG00000272558 ncRNA_intronic Human antisense chr6:25984525 chr6:25984505 . . 0 hm6A_associated_SNPs_8279 0 0 0 3 25984503 25984523 mRNA hsa-miR-590-3p TRIM38 miRanda miRanda
14034 chr6 26094857 26094857 1 + T C rs62625351 26094846 + 26094826 26094866 41 ACATCTGAGAAAAGCTTTGAACCCTGGGACGTGGCTAGTCA ACATCTGAGAAAAGCTTTGAACCCTGGGACGCGGCTAGTCA < 41bp 1 0.297232742209539 1 0.820906937122345 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 HFE ENSG00000010704 UTR3 Human protein_coding chr6:26094846 chr6:26094857 . . 0 hm6A_associated_SNPs_8282 0 0 0 1 26094851 26094873 mRNA hsa-miR-154 HFE miRanda miRanda
14034 chr6 26171250 26171250 1 + T C rs1059490 26171245 + 26171225 26171265 41 AGAAATGAATGCATAAAATAACTGATAATATGAATCTATAC AGAAATGAATGCATAAAATAACTGACAATATGAATCTATAC < 41bp 1 0.345489381729052 1 0.790862202644348 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 HIST1H2BD ENSG00000158373 UTR3 Human protein_coding chr6:26171245 chr6:26171250 . . 0 hm6A_associated_SNPs_8300 0 1 1 6 26171241 26171262 mRNA hsa-miR-181a HIST1H2BD miRanda miRanda
14034 chr6 26171250 26171250 1 + T C rs1059490 26171245 + 26171225 26171265 41 AGAAATGAATGCATAAAATAACTGATAATATGAATCTATAC AGAAATGAATGCATAAAATAACTGACAATATGAATCTATAC < 41bp 1 0.345489381729052 1 0.790862202644348 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 HIST1H2BD ENSG00000158373 UTR3 Human protein_coding chr6:26171245 chr6:26171250 . . 0 hm6A_associated_SNPs_8300 0 1 1 6 26171241 26171262 mRNA hsa-miR-181b HIST1H2BD miRanda miRanda
14034 chr6 26171250 26171250 1 + T C rs1059490 26171245 + 26171225 26171265 41 AGAAATGAATGCATAAAATAACTGATAATATGAATCTATAC AGAAATGAATGCATAAAATAACTGACAATATGAATCTATAC < 41bp 1 0.345489381729052 1 0.790862202644348 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 HIST1H2BD ENSG00000158373 UTR3 Human protein_coding chr6:26171245 chr6:26171250 . . 0 hm6A_associated_SNPs_8300 0 1 1 6 26171241 26171262 mRNA hsa-miR-181c HIST1H2BD miRanda miRanda
14034 chr6 26171250 26171250 1 + T C rs1059490 26171245 + 26171225 26171265 41 AGAAATGAATGCATAAAATAACTGATAATATGAATCTATAC AGAAATGAATGCATAAAATAACTGACAATATGAATCTATAC < 41bp 1 0.345489381729052 1 0.790862202644348 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 HIST1H2BD ENSG00000158373 UTR3 Human protein_coding chr6:26171245 chr6:26171250 . . 0 hm6A_associated_SNPs_8300 0 1 1 6 26171230 26171251 mRNA hsa-miR-223 HIST1H2BD miRanda miRanda
14034 chr6 26171250 26171250 1 + T C rs1059490 26171245 + 26171225 26171265 41 AGAAATGAATGCATAAAATAACTGATAATATGAATCTATAC AGAAATGAATGCATAAAATAACTGACAATATGAATCTATAC < 41bp 1 0.345489381729052 1 0.790862202644348 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 HIST1H2BD ENSG00000158373 UTR3 Human protein_coding chr6:26171245 chr6:26171250 . . 0 hm6A_associated_SNPs_8300 0 1 1 6 26171231 26171252 mRNA hsa-miR-361-5p HIST1H2BD miRanda miRanda
14034 chr6 26171250 26171250 1 + T C rs1059490 26171245 + 26171225 26171265 41 AGAAATGAATGCATAAAATAACTGATAATATGAATCTATAC AGAAATGAATGCATAAAATAACTGACAATATGAATCTATAC < 41bp 1 0.345489381729052 1 0.790862202644348 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 HIST1H2BD ENSG00000158373 UTR3 Human protein_coding chr6:26171245 chr6:26171250 . . 0 hm6A_associated_SNPs_8300 0 1 1 6 26171241 26171262 mRNA hsa-miR-181d HIST1H2BD miRanda miRanda
14034 chr6 26393264 26393264 1 + C A rs574356294 26393275 + 26393255 26393295 41 CACAACCCCCCTAATGAAAGACACGCCCTCCTCCCCTCTGG CACAACCCCACTAATGAAAGACACGCCCTCCTCCCCTCTGG < 41bp 1 0.566793164336502 1 0.853878140449524 experiment 0.866413671326996 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 BTN2A2 ENSG00000124508 UTR3 Human protein_coding chr6:26393275 chr6:26393264 . . 0 hm6A_associated_SNPs_8317 0 0 0 1 26393259 26393280 mRNA hsa-miR-187 BTN2A2 miRanda miRanda
14034 chr6 26413713 26413713 1 + T C rs200540440 26413711 + 26413691 26413731 41 GGAATAAGTATCGGACTCTAACTGAGCCCAGAACCAACCTG GGAATAAGTATCGGACTCTAACCGAGCCCAGAACCAACCTG < 41bp 1 0.592863039582798 1 0.918808341026306 experiment 0.814273920834405 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26413711 chr6:26413713 synonymous SNV . 0 hm6A_associated_SNPs_8319 0 0 1 1 26413696 26413719 mRNA hsa-miR-24 BTN3A1 miRanda miRanda
14034 chr6 26423856 26423856 1 + A G rs2393652 26423870 + 26423850 26423890 41 CCATCAATAATTGTCTTGGGACAACTGGAATAAACAGTGAC CCATCAGTAATTGTCTTGGGACAACTGGAATAAACAGTGAC < 41bp 1 0.112693351151601 1 0.847838997840881 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423870 chr6:26423856 . . 0 hm6A_associated_SNPs_8320 0 0 1 1 26423854 26423878 mRNA hsa-miR-199b-5p BTN2A3 miRanda miRanda
14034 chr6 26423862 26423862 1 + G A rs544389001 26423870 + 26423850 26423890 41 CCATCAATAATTGTCTTGGGACAACTGGAATAAACAGTGAC CCATCAATAATTATCTTGGGACAACTGGAATAAACAGTGAC < 41bp 1 0.143336924819146 1 0.85888946056366 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423870 chr6:26423862 . . 0 hm6A_associated_SNPs_8321 0 0 1 2 26423854 26423878 mRNA hsa-miR-199b-5p BTN2A3 miRanda miRanda
14034 chr6 26423862 26423862 1 + G A rs544389001 26423870 + 26423850 26423890 41 CCATCAATAATTGTCTTGGGACAACTGGAATAAACAGTGAC CCATCAATAATTATCTTGGGACAACTGGAATAAACAGTGAC < 41bp 1 0.143336924819146 1 0.85888946056366 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423870 chr6:26423862 . . 0 hm6A_associated_SNPs_8321 0 0 1 2 26423857 26423879 mRNA hsa-miR-145 BTN2A3 miRanda miRanda
14034 chr6 26423867 26423867 1 + G A rs2893845 26423870 + 26423850 26423890 41 CCATCAATAATTGTCTTGGGACAACTGGAATAAACAGTGAC CCATCAATAATTGTCTTAGGACAACTGGAATAAACAGTGAC < 41bp 1 0.133314150536357 1 0.728291749954224 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 18 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423870 chr6:26423867 . . 0 hm6A_associated_SNPs_8322 0 0 0 2 26423854 26423878 mRNA hsa-miR-199b-5p BTN2A3 miRanda miRanda
14034 chr6 26423867 26423867 1 + G A rs2893845 26423870 + 26423850 26423890 41 CCATCAATAATTGTCTTGGGACAACTGGAATAAACAGTGAC CCATCAATAATTGTCTTAGGACAACTGGAATAAACAGTGAC < 41bp 1 0.133314150536357 1 0.728291749954224 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 18 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423870 chr6:26423867 . . 0 hm6A_associated_SNPs_8322 0 0 0 2 26423857 26423879 mRNA hsa-miR-145 BTN2A3 miRanda miRanda
14034 chr6 26423867 26423867 1 + G A rs2893845 26423883 + 26423863 26423903 41 TCTTGGGACAACTGGAATAAACAGTGACTGCCCAGAGAACT TCTTAGGACAACTGGAATAAACAGTGACTGCCCAGAGAACT < 41bp 1 0.112806011260394 1 0.74115914106369 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423883 chr6:26423867 . . 0 hm6A_associated_SNPs_8323 0 0 0 2 26423854 26423878 mRNA hsa-miR-199b-5p BTN2A3 miRanda miRanda
14034 chr6 26423867 26423867 1 + G A rs2893845 26423883 + 26423863 26423903 41 TCTTGGGACAACTGGAATAAACAGTGACTGCCCAGAGAACT TCTTAGGACAACTGGAATAAACAGTGACTGCCCAGAGAACT < 41bp 1 0.112806011260394 1 0.74115914106369 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423883 chr6:26423867 . . 0 hm6A_associated_SNPs_8323 0 0 0 2 26423857 26423879 mRNA hsa-miR-145 BTN2A3 miRanda miRanda
14034 chr6 26468812 26468812 1 + G A rs73738456 26468808 + 26468788 26468828 41 TTGGTCTCACAGCCATGTAGACAAGCCCTGGTCATCTCAGC TTGGTCTCACAGCCATGTAGACAAACCCTGGTCATCTCAGC < 41bp 1 0.471538390487302 1 0.334446310997009 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 BTN2A1 ENSG00000112763 UTR3 Human protein_coding chr6:26468808 chr6:26468812 . . 0 hm6A_associated_SNPs_8326 0 0 1 1 26468803 26468826 mRNA hsa-miR-143 BTN2A1 miRanda miRanda
14034 chr6 26469400 26469400 1 + G C rs183212595 26469405 + 26469385 26469425 41 GGGATGAAGATGAATGAAGAACATGGATGCACGTGGATGTA GGGATGAAGATGAATCAAGAACATGGATGCACGTGGATGTA < 41bp 1 0.593630245000443 1 0.785721361637115 experiment 0.812739509999115 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 16 BTN2A1 ENSG00000112763 UTR3 Human protein_coding chr6:26469405 chr6:26469400 . . 0 hm6A_associated_SNPs_8328 0 0 1 1 26469398 26469420 mRNA hsa-miR-148b BTN2A1 miRanda miRanda
14034 chr6 26546156 26546156 1 + C T rs145535311 26546145 + 26546125 26546165 41 CAGCTGTGTTAGGTAACAAAACTCAGGCTTTCTGTTGATGA CAGCTGTGTTAGGTAACAAAACTCAGGCTTTTTGTTGATGA < 41bp 1 0.590664410481884 1 0.859699547290802 experiment 0.818671179036232 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 HMGN4 ENSG00000182952 UTR3 Human protein_coding chr6:26546145 chr6:26546156 . . 0 hm6A_associated_SNPs_8336 0 0 1 5 26546134 26546156 mRNA hsa-miR-320a HMGN4 miRanda miRanda
14034 chr6 26546156 26546156 1 + C T rs145535311 26546145 + 26546125 26546165 41 CAGCTGTGTTAGGTAACAAAACTCAGGCTTTCTGTTGATGA CAGCTGTGTTAGGTAACAAAACTCAGGCTTTTTGTTGATGA < 41bp 1 0.590664410481884 1 0.859699547290802 experiment 0.818671179036232 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 HMGN4 ENSG00000182952 UTR3 Human protein_coding chr6:26546145 chr6:26546156 . . 0 hm6A_associated_SNPs_8336 0 0 1 5 26546143 26546163 mRNA hsa-miR-421 HMGN4 miRanda miRanda
14034 chr6 26546156 26546156 1 + C T rs145535311 26546145 + 26546125 26546165 41 CAGCTGTGTTAGGTAACAAAACTCAGGCTTTCTGTTGATGA CAGCTGTGTTAGGTAACAAAACTCAGGCTTTTTGTTGATGA < 41bp 1 0.590664410481884 1 0.859699547290802 experiment 0.818671179036232 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 HMGN4 ENSG00000182952 UTR3 Human protein_coding chr6:26546145 chr6:26546156 . . 0 hm6A_associated_SNPs_8336 0 0 1 5 26546134 26546156 mRNA hsa-miR-320b HMGN4 miRanda miRanda
14034 chr6 26546156 26546156 1 + C T rs145535311 26546145 + 26546125 26546165 41 CAGCTGTGTTAGGTAACAAAACTCAGGCTTTCTGTTGATGA CAGCTGTGTTAGGTAACAAAACTCAGGCTTTTTGTTGATGA < 41bp 1 0.590664410481884 1 0.859699547290802 experiment 0.818671179036232 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 HMGN4 ENSG00000182952 UTR3 Human protein_coding chr6:26546145 chr6:26546156 . . 0 hm6A_associated_SNPs_8336 0 0 1 5 26546136 26546156 mRNA hsa-miR-320c HMGN4 miRanda miRanda
14034 chr6 26546156 26546156 1 + C T rs145535311 26546145 + 26546125 26546165 41 CAGCTGTGTTAGGTAACAAAACTCAGGCTTTCTGTTGATGA CAGCTGTGTTAGGTAACAAAACTCAGGCTTTTTGTTGATGA < 41bp 1 0.590664410481884 1 0.859699547290802 experiment 0.818671179036232 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 HMGN4 ENSG00000182952 UTR3 Human protein_coding chr6:26546145 chr6:26546156 . . 0 hm6A_associated_SNPs_8336 0 0 1 5 26546137 26546156 mRNA hsa-miR-320d HMGN4 miRanda miRanda
14034 chr6 26599043 26599043 1 + T G rs13978 26599041 + 26599021 26599061 41 TTCCACTGTCCCCACTCCGAACTCCTGTATGTGCCTGGCTG TTCCACTGTCCCCACTCCGAACGCCTGTATGTGCCTGGCTG Direct Loss 1 0.770629712981131 1 0.719464302062988 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 23 ABT1 ENSG00000146109 UTR3 Human protein_coding chr6:26599041 chr6:26599043 . . 0 hm6A_associated_SNPs_8341 0 0 1 1 26599040 26599062 mRNA hsa-miR-214 ABT1 miRanda miRanda
14034 chr6 28060239 28060239 1 + T C rs13197574 28060235 + 28060215 28060255 41 CCATAACAGCTGCAGCCTTGACTATTAAATCTCAAAGGGAA CCATAACAGCTGCAGCCTTGACTACTAAATCTCAAAGGGAA < 41bp 1 0.212582261841947 1 0.990807771682739 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 25 ZSCAN12P1 ENSG00000219891 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:28060235 chr6:28060239 . . 0 hm6A_associated_SNPs_8353 0 1 1 2 28060234 28060255 mRNA hsa-miR-204 ZSCAN12P1 miRanda miRanda
14034 chr6 28060239 28060239 1 + T C rs13197574 28060235 + 28060215 28060255 41 CCATAACAGCTGCAGCCTTGACTATTAAATCTCAAAGGGAA CCATAACAGCTGCAGCCTTGACTACTAAATCTCAAAGGGAA < 41bp 1 0.212582261841947 1 0.990807771682739 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 25 ZSCAN12P1 ENSG00000219891 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:28060235 chr6:28060239 . . 0 hm6A_associated_SNPs_8353 0 1 1 2 28060234 28060255 mRNA hsa-miR-211 ZSCAN12P1 miRanda miRanda
14034 chr6 28201073 28201073 1 + T G rs570452291 28201071 + 28201051 28201091 41 TGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCC TGTGTTTGAAACAAATCCTGACGTAAGGCCCAGGGACTTCC Direct Loss 1 0.467971578121858 1 0.990597248077393 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 ZSCAN9 ENSG00000137185 UTR3 Human protein_coding chr6:28201071 chr6:28201073 . . 0 hm6A_associated_SNPs_8357 0 0 0 1 28201048 28201073 mRNA hsa-miR-223 ZNF193 miRanda miRanda
14034 chr6 28201073 28201073 1 + T G rs570452291 28201086 + 28201066 28201106 41 TCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGG TCCTGACGTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGG < 41bp 1 0.598119607603115 1 0.993032217025757 experiment 0.80376078479377 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 ZSCAN9 ENSG00000137185 UTR3 Human protein_coding chr6:28201086 chr6:28201073 . . 0 hm6A_associated_SNPs_8358 0 0 0 1 28201048 28201073 mRNA hsa-miR-223 ZNF193 miRanda miRanda
14034 chr6 28245308 28245308 1 + T A rs116107846 28245290 + 28245270 28245310 41 GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGTAT GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGAAT < 41bp 1 0.119621000849225 1 0.603410422801971 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 ZSCAN26 ENSG00000197062 ncRNA_exonic Human protein_coding chr6:28245290 chr6:28245308 . . 0 hm6A_associated_SNPs_8361 0 0 1 4 28245297 28245320 mRNA hsa-let-7d ZNF187 miRanda miRanda
14034 chr6 28245308 28245308 1 + T A rs116107846 28245290 + 28245270 28245310 41 GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGTAT GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGAAT < 41bp 1 0.119621000849225 1 0.603410422801971 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 ZSCAN26 ENSG00000197062 ncRNA_exonic Human protein_coding chr6:28245290 chr6:28245308 . . 0 hm6A_associated_SNPs_8361 0 0 1 4 28245298 28245320 mRNA hsa-let-7f ZNF187 miRanda miRanda
14034 chr6 28245308 28245308 1 + T A rs116107846 28245290 + 28245270 28245310 41 GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGTAT GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGAAT < 41bp 1 0.119621000849225 1 0.603410422801971 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 ZSCAN26 ENSG00000197062 ncRNA_exonic Human protein_coding chr6:28245290 chr6:28245308 . . 0 hm6A_associated_SNPs_8361 0 0 1 4 28245297 28245320 mRNA hsa-miR-98 ZNF187 miRanda miRanda
14034 chr6 28245308 28245308 1 + T A rs116107846 28245290 + 28245270 28245310 41 GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGTAT GCTTTCTCCTATGAAATAAAACTGATGATGTTTGGAAGAAT < 41bp 1 0.119621000849225 1 0.603410422801971 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 ZSCAN26 ENSG00000197062 ncRNA_exonic Human protein_coding chr6:28245290 chr6:28245308 . . 0 hm6A_associated_SNPs_8361 0 0 1 4 28245297 28245320 mRNA hsa-let-7g ZNF187 miRanda miRanda
14034 chr6 29913266 29913266 1 + G A rs1061156 29913252 + 29913232 29913272 41 AGACAGCTGCCTTGTGTGGGACTGAGAGGCAAGAGTTGTTC AGACAGCTGCCTTGTGTGGGACTGAGAGGCAAGAATTGTTC < 41bp 1 0.290907532232714 1 0.304955273866653 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913252 chr6:29913266 . . 0 hm6A_associated_SNPs_8426 0 0 1 1 29913253 29913276 mRNA hsa-miR-873 HLA-A miRanda miRanda
14034 chr6 29913274 29913274 1 + T C rs572407231 29913290 + 29913270 29913310 41 TTCCTGCCCTTCCCTTTGTGACTTGAAGAACCCTGACTTTG TTCCCGCCCTTCCCTTTGTGACTTGAAGAACCCTGACTTTG < 41bp 1 0.239996912412295 1 0.0419456362724304 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913290 chr6:29913274 . . 0 hm6A_associated_SNPs_8427 0 0 1 2 29913274 29913294 mRNA hsa-miR-224 HLA-A miRanda miRanda
14034 chr6 29913274 29913274 1 + T C rs572407231 29913290 + 29913270 29913310 41 TTCCTGCCCTTCCCTTTGTGACTTGAAGAACCCTGACTTTG TTCCCGCCCTTCCCTTTGTGACTTGAAGAACCCTGACTTTG < 41bp 1 0.239996912412295 1 0.0419456362724304 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913290 chr6:29913274 . . 0 hm6A_associated_SNPs_8427 0 0 1 2 29913253 29913276 mRNA hsa-miR-873 HLA-A miRanda miRanda
14034 chr6 29913294 29913294 1 + G C rs200062476 29913290 + 29913270 29913310 41 TTCCTGCCCTTCCCTTTGTGACTTGAAGAACCCTGACTTTG TTCCTGCCCTTCCCTTTGTGACTTCAAGAACCCTGACTTTG < 41bp 1 0.246102540283531 1 0.0369828045368195 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913290 chr6:29913294 . . 0 hm6A_associated_SNPs_8428 0 0 1 1 29913274 29913294 mRNA hsa-miR-224 HLA-A miRanda miRanda
14034 chr6 29913294 29913294 1 + G C rs200062476 29913299 + 29913279 29913319 41 TTCCCTTTGTGACTTGAAGAACCCTGACTTTGTTTCTGCAA TTCCCTTTGTGACTTCAAGAACCCTGACTTTGTTTCTGCAA < 41bp 1 0.209377421018642 1 0.0308272540569305 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 16 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913299 chr6:29913294 . . 0 hm6A_associated_SNPs_8429 0 0 1 1 29913274 29913294 mRNA hsa-miR-224 HLA-A miRanda miRanda
14034 chr6 29913294 29913294 1 + G C rs200062476 29913305 + 29913285 29913325 41 TTGTGACTTGAAGAACCCTGACTTTGTTTCTGCAAAGGCAC TTGTGACTTCAAGAACCCTGACTTTGTTTCTGCAAAGGCAC < 41bp 1 0.323735730413334 1 0.0857314765453339 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 10 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913305 chr6:29913294 . . 0 hm6A_associated_SNPs_8430 0 0 1 1 29913274 29913294 mRNA hsa-miR-224 HLA-A miRanda miRanda
14034 chr6 29913501 29913501 1 + C T rs144149732 29913511 + 29913491 29913531 41 TCATGGTGCACTGAGCTGTAACTTCTTCCTTCCCTATTAAA TCATGGTGCATTGAGCTGTAACTTCTTCCTTCCCTATTAAA < 41bp 1 0.102902704254527 1 0.0154223442077637 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913511 chr6:29913501 . . 0 hm6A_associated_SNPs_8436 0 0 1 3 29913484 29913504 mRNA hsa-miR-148a HLA-A miRanda miRanda
14034 chr6 29913501 29913501 1 + C T rs144149732 29913511 + 29913491 29913531 41 TCATGGTGCACTGAGCTGTAACTTCTTCCTTCCCTATTAAA TCATGGTGCATTGAGCTGTAACTTCTTCCTTCCCTATTAAA < 41bp 1 0.102902704254527 1 0.0154223442077637 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913511 chr6:29913501 . . 0 hm6A_associated_SNPs_8436 0 0 1 3 29913485 29913504 mRNA hsa-miR-152 HLA-A miRanda miRanda
14034 chr6 29913501 29913501 1 + C T rs144149732 29913511 + 29913491 29913531 41 TCATGGTGCACTGAGCTGTAACTTCTTCCTTCCCTATTAAA TCATGGTGCATTGAGCTGTAACTTCTTCCTTCCCTATTAAA < 41bp 1 0.102902704254527 1 0.0154223442077637 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913511 chr6:29913501 . . 0 hm6A_associated_SNPs_8436 0 0 1 3 29913484 29913504 mRNA hsa-miR-148b HLA-A miRanda miRanda
14034 chr6 29913515 29913515 1 + C T rs112525507 29913511 + 29913491 29913531 41 TCATGGTGCACTGAGCTGTAACTTCTTCCTTCCCTATTAAA TCATGGTGCACTGAGCTGTAACTTTTTCCTTCCCTATTAAA < 41bp 1 0.122904624838119 1 0.0217331945896149 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913511 chr6:29913515 . . 0 hm6A_associated_SNPs_8437 0 0 1 1 29913514 29913535 mRNA hsa-miR-590-3p HLA-A miRanda miRanda
14034 chr6 30457276 30457276 1 + T C rs372618768 30457292 + 30457272 30457312 41 GGACTCAAGAAGTTCTCAGGACTCAGAGGCTGGGATCATGG GGACCCAAGAAGTTCTCAGGACTCAGAGGCTGGGATCATGG < 41bp 1 0.285419423135465 1 0.977276206016541 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 5 HLA-E ENSG00000204592 UTR5 Human protein_coding chr6:30457292 chr6:30457276 . . 0 hm6A_associated_SNPs_8443 0 0 0 2 30457271 30457289 mRNA hsa-miR-146a HLA-E miRanda miRanda
14034 chr6 30457276 30457276 1 + T C rs372618768 30457292 + 30457272 30457312 41 GGACTCAAGAAGTTCTCAGGACTCAGAGGCTGGGATCATGG GGACCCAAGAAGTTCTCAGGACTCAGAGGCTGGGATCATGG < 41bp 1 0.285419423135465 1 0.977276206016541 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 5 HLA-E ENSG00000204592 UTR5 Human protein_coding chr6:30457292 chr6:30457276 . . 0 hm6A_associated_SNPs_8443 0 0 0 2 30457271 30457289 mRNA hsa-miR-146b-5p HLA-E miRanda miRanda
14034 chr6 30457283 30457283 1 + G A rs76971248 30457292 + 30457272 30457312 41 GGACTCAAGAAGTTCTCAGGACTCAGAGGCTGGGATCATGG GGACTCAAGAAATTCTCAGGACTCAGAGGCTGGGATCATGG < 41bp 1 0.308210143374903 1 0.984948992729187 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 HLA-E ENSG00000204592 UTR5 Human protein_coding chr6:30457292 chr6:30457283 . . 0 hm6A_associated_SNPs_8444 0 0 0 2 30457271 30457289 mRNA hsa-miR-146a HLA-E miRanda miRanda
14034 chr6 30457283 30457283 1 + G A rs76971248 30457292 + 30457272 30457312 41 GGACTCAAGAAGTTCTCAGGACTCAGAGGCTGGGATCATGG GGACTCAAGAAATTCTCAGGACTCAGAGGCTGGGATCATGG < 41bp 1 0.308210143374903 1 0.984948992729187 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 HLA-E ENSG00000204592 UTR5 Human protein_coding chr6:30457292 chr6:30457283 . . 0 hm6A_associated_SNPs_8444 0 0 0 2 30457271 30457289 mRNA hsa-miR-146b-5p HLA-E miRanda miRanda
14034 chr6 30461068 30461068 1 + C T rs372703108 30461051 + 30461031 30461071 41 ACTGCACTCCAGCCTGGGTGACAGGGTGAAACGCCATCTCA ACTGCACTCCAGCCTGGGTGACAGGGTGAAACGCCATTTCA < 41bp 1 0.185272112257878 1 0.00792428851127625 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 HLA-E ENSG00000204592 UTR3 Human protein_coding chr6:30461051 chr6:30461068 . . 0 hm6A_associated_SNPs_8447 0 0 1 2 30461051 30461071 mRNA hsa-miR-143 HLA-E miRanda miRanda
14034 chr6 30461068 30461068 1 + C T rs372703108 30461051 + 30461031 30461071 41 ACTGCACTCCAGCCTGGGTGACAGGGTGAAACGCCATCTCA ACTGCACTCCAGCCTGGGTGACAGGGTGAAACGCCATTTCA < 41bp 1 0.185272112257878 1 0.00792428851127625 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 HLA-E ENSG00000204592 UTR3 Human protein_coding chr6:30461051 chr6:30461068 . . 0 hm6A_associated_SNPs_8447 0 0 1 2 30461065 30461085 mRNA hsa-miR-590-3p HLA-E miRanda miRanda
14034 chr6 30531405 30531405 1 + C T rs118091829 30531415 + 30531395 30531435 41 GGGGTGAGAGCTGTTGGAGAACTGAGAATGAGGTTTTTTTT GGGGTGAGAGTTGTTGGAGAACTGAGAATGAGGTTTTTTTT < 41bp 1 0.296301275865645 1 0.212005615234375 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 PRR3 ENSG00000204576 UTR3 Human protein_coding chr6:30531415 chr6:30531405 . . 0 hm6A_associated_SNPs_8453 0 0 1 1 30531399 30531422 mRNA hsa-miR-145 PRR3 miRanda miRanda
14034 chr6 30531413 30531413 1 + G A rs114423170 30531415 + 30531395 30531435 41 GGGGTGAGAGCTGTTGGAGAACTGAGAATGAGGTTTTTTTT GGGGTGAGAGCTGTTGGAAAACTGAGAATGAGGTTTTTTTT < 41bp 1 0.198831937163899 1 0.178082138299942 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 19 PRR3 ENSG00000204576 UTR3 Human protein_coding chr6:30531415 chr6:30531413 . . 0 hm6A_associated_SNPs_8454 0 0 1 1 30531399 30531422 mRNA hsa-miR-145 PRR3 miRanda miRanda
14034 chr6 30531431 30531431 1 + T G rs544675676 30531415 + 30531395 30531435 41 GGGGTGAGAGCTGTTGGAGAACTGAGAATGAGGTTTTTTTT GGGGTGAGAGCTGTTGGAGAACTGAGAATGAGGTTTGTTTT < 41bp 1 0.329903609318351 1 0.294811964035034 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 37 PRR3 ENSG00000204576 UTR3 Human protein_coding chr6:30531415 chr6:30531431 . . 0 hm6A_associated_SNPs_8455 0 0 1 1 30531427 30531448 mRNA hsa-miR-186 PRR3 miRanda miRanda
14034 chr6 30558992 30558992 1 + C G rs531840276 30559009 + 30558989 30559029 41 AGCCTCTTGTCTGGTTGAGGACTTGGGGCAGGAAAGGAATG AGCGTCTTGTCTGGTTGAGGACTTGGGGCAGGAAAGGAATG < 41bp 1 0.79505883529487 1 0.968297123908997 experiment 0.40988232941026 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 4 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559009 chr6:30558992 . . 0 hm6A_associated_SNPs_8456 0 0 1 1 30558974 30558995 mRNA hsa-miR-485-5p ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559014 30559035 mRNA hsa-miR-15a ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559014 30559035 mRNA hsa-miR-16 ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559012 30559034 mRNA hsa-miR-103 ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559012 30559034 mRNA hsa-miR-107 ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559014 30559035 mRNA hsa-miR-15b ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559015 30559035 mRNA hsa-miR-195 ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559015 30559035 mRNA hsa-miR-424 ABCF1 miRanda miRanda
14034 chr6 30559034 30559034 1 + T C rs9671 30559037 + 30559017 30559057 41 CAGGAAAGGAATGCTGCTGAACTTGAATTTCCCTTTACAAG CAGGAAAGGAATGCTGCCGAACTTGAATTTCCCTTTACAAG < 41bp 1 0.595729923978011 1 0.962727069854736 experiment 0.808540152043977 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ABCF1 ENSG00000204574 UTR3 Human protein_coding chr6:30559037 chr6:30559034 . . 0 hm6A_associated_SNPs_8457 0 0 1 8 30559015 30559035 mRNA hsa-miR-497 ABCF1 miRanda miRanda
14034 chr6 30593982 30593982 1 + G A rs75407659 30593985 + 30593965 30594005 41 TGTGTCTTTTGTGGCCAGTGACAAATCCAGGAAATGAATGT TGTGTCTTTTGTGGCCAATGACAAATCCAGGAAATGAATGT < 41bp 1 0.388545804033516 1 0.0371056795120239 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MRPS18B ENSG00000204568 UTR3 Human protein_coding chr6:30593985 chr6:30593982 . . 0 hm6A_associated_SNPs_8459 0 0 1 2 30593963 30593984 mRNA hsa-miR-193a-3p MRPS18B miRanda miRanda
14034 chr6 30593982 30593982 1 + G A rs75407659 30593985 + 30593965 30594005 41 TGTGTCTTTTGTGGCCAGTGACAAATCCAGGAAATGAATGT TGTGTCTTTTGTGGCCAATGACAAATCCAGGAAATGAATGT < 41bp 1 0.388545804033516 1 0.0371056795120239 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MRPS18B ENSG00000204568 UTR3 Human protein_coding chr6:30593985 chr6:30593982 . . 0 hm6A_associated_SNPs_8459 0 0 1 2 30593963 30593984 mRNA hsa-miR-193b MRPS18B miRanda miRanda
14034 chr6 30692322 30692322 1 + A G rs538816392 30692308 + 30692288 30692328 41 TCTTCTGGGGGGGGTCTAGAACAGTGCCTGGCACATAGTAG TCTTCTGGGGGGGGTCTAGAACAGTGCCTGGCACGTAGTAG < 41bp 1 0.19684160736212 1 0.848576843738556 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30692308 chr6:30692322 . . 0 hm6A_associated_SNPs_8464 0 0 1 1 30692304 30692324 mRNA hsa-miR-455-5p TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693117 30693138 mRNA hsa-miR-15a TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693116 30693138 mRNA hsa-miR-16 TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693115 30693137 mRNA hsa-miR-103 TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693115 30693137 mRNA hsa-miR-107 TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693113 30693138 mRNA hsa-miR-15b TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693117 30693138 mRNA hsa-miR-195 TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693116 30693138 mRNA hsa-miR-424 TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693119 30693138 mRNA hsa-miR-497 TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693116 30693138 mRNA hsa-miR-503 TUBB miRanda miRanda
14034 chr6 30693121 30693121 1 + A G rs7781 30693128 + 30693108 30693148 41 AGATTTCTATTTTATGTTGAACTTGCTGCTTTTTTTCATAT AGATTTCTATTTTGTGTTGAACTTGCTGCTTTTTTTCATAT < 41bp 1 0.45518742566582 1 0.129360288381577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 TUBB ENSG00000196230 UTR3 Human protein_coding chr6:30693128 chr6:30693121 . . 0 hm6A_associated_SNPs_8468 0 0 1 10 30693106 30693128 mRNA hsa-miR-421 TUBB miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCTACTGCCAAGG < 41bp 1 0.685375885352444 1 0.884533762931824 experiment 0.629248229295113 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130499 . . 0 hm6A_associated_SNPs_8481 0 0 1 4 31130495 31130506 mRNA hsa-miR-34a TCF19 miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCTACTGCCAAGG < 41bp 1 0.685375885352444 1 0.884533762931824 experiment 0.629248229295113 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130499 . . 0 hm6A_associated_SNPs_8481 0 0 1 4 31130495 31130506 mRNA hsa-miR-34c-5p TCF19 miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCTACTGCCAAGG < 41bp 1 0.685375885352444 1 0.884533762931824 experiment 0.629248229295113 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130499 . . 0 hm6A_associated_SNPs_8481 0 0 1 4 31130495 31130506 mRNA hsa-miR-449a TCF19 miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCTACTGCCAAGG < 41bp 1 0.685375885352444 1 0.884533762931824 experiment 0.629248229295113 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130499 . . 0 hm6A_associated_SNPs_8481 0 0 1 4 31130495 31130506 mRNA hsa-miR-449b TCF19 miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA TACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.664364900449939 1 0.95357483625412 experiment 0.671270199100122 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130499 . . 0 hm6A_associated_SNPs_8482 0 0 1 4 31130495 31130506 mRNA hsa-miR-34a TCF19 miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA TACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.664364900449939 1 0.95357483625412 experiment 0.671270199100122 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130499 . . 0 hm6A_associated_SNPs_8482 0 0 1 4 31130495 31130506 mRNA hsa-miR-34c-5p TCF19 miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA TACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.664364900449939 1 0.95357483625412 experiment 0.671270199100122 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130499 . . 0 hm6A_associated_SNPs_8482 0 0 1 4 31130495 31130506 mRNA hsa-miR-449a TCF19 miRanda miRanda
14034 chr6 31130499 31130499 1 + C T rs375272956 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA TACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.664364900449939 1 0.95357483625412 experiment 0.671270199100122 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130499 . . 0 hm6A_associated_SNPs_8482 0 0 1 4 31130495 31130506 mRNA hsa-miR-449b TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACCGCCAAGG < 41bp 1 0.705177314963963 1 0.904821515083313 experiment 0.589645370072074 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130502 . . 0 hm6A_associated_SNPs_8483 0 0 1 4 31130495 31130506 mRNA hsa-miR-34a TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACCGCCAAGG < 41bp 1 0.705177314963963 1 0.904821515083313 experiment 0.589645370072074 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130502 . . 0 hm6A_associated_SNPs_8483 0 0 1 4 31130495 31130506 mRNA hsa-miR-34c-5p TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACCGCCAAGG < 41bp 1 0.705177314963963 1 0.904821515083313 experiment 0.589645370072074 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130502 . . 0 hm6A_associated_SNPs_8483 0 0 1 4 31130495 31130506 mRNA hsa-miR-449a TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130489 + 31130469 31130509 41 GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACTGCCAAGG GGTGCCGGGCTGGCATTCAGACCTAAGGTCCACCGCCAAGG < 41bp 1 0.705177314963963 1 0.904821515083313 experiment 0.589645370072074 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130489 chr6:31130502 . . 0 hm6A_associated_SNPs_8483 0 0 1 4 31130495 31130506 mRNA hsa-miR-449b TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA CACCGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.70087199092294 1 0.963475346565247 experiment 0.598256018154119 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130502 . . 0 hm6A_associated_SNPs_8484 0 0 1 4 31130495 31130506 mRNA hsa-miR-34a TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA CACCGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.70087199092294 1 0.963475346565247 experiment 0.598256018154119 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130502 . . 0 hm6A_associated_SNPs_8484 0 0 1 4 31130495 31130506 mRNA hsa-miR-34c-5p TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA CACCGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.70087199092294 1 0.963475346565247 experiment 0.598256018154119 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130502 . . 0 hm6A_associated_SNPs_8484 0 0 1 4 31130495 31130506 mRNA hsa-miR-449a TCF19 miRanda miRanda
14034 chr6 31130502 31130502 1 + T C rs1065461 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA CACCGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA < 41bp 1 0.70087199092294 1 0.963475346565247 experiment 0.598256018154119 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130502 . . 0 hm6A_associated_SNPs_8484 0 0 1 4 31130495 31130506 mRNA hsa-miR-449b TCF19 miRanda miRanda
14034 chr6 31130529 31130529 1 + C T rs139890734 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA CACTGCCAAGGCACCATCGGACACACCTGCTCATGAGTAGA < 41bp 1 0.682711933114856 1 0.944426774978638 experiment 0.634576133770287 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130529 . . 0 hm6A_associated_SNPs_8485 0 0 1 3 31130508 31130530 mRNA hsa-miR-34a TCF19 miRanda miRanda
14034 chr6 31130529 31130529 1 + C T rs139890734 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA CACTGCCAAGGCACCATCGGACACACCTGCTCATGAGTAGA < 41bp 1 0.682711933114856 1 0.944426774978638 experiment 0.634576133770287 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130529 . . 0 hm6A_associated_SNPs_8485 0 0 1 3 31130508 31130530 mRNA hsa-miR-34c-5p TCF19 miRanda miRanda
14034 chr6 31130529 31130529 1 + C T rs139890734 31130519 + 31130499 31130539 41 CACTGCCAAGGCACCATCGGACACACCTGCCCATGAGTAGA CACTGCCAAGGCACCATCGGACACACCTGCTCATGAGTAGA < 41bp 1 0.682711933114856 1 0.944426774978638 experiment 0.634576133770287 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130519 chr6:31130529 . . 0 hm6A_associated_SNPs_8485 0 0 1 3 31130514 31130536 mRNA hsa-miR-330-5p TCF19 miRanda miRanda
14034 chr6 31130529 31130529 1 + C T rs139890734 31130539 + 31130519 31130559 41 ACACACCTGCCCATGAGTAGACACAGCAGCGAGCAAATAGG ACACACCTGCTCATGAGTAGACACAGCAGCGAGCAAATAGG < 41bp 1 0.530692075714962 1 0.927437901496887 experiment 0.938615848570076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 11 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130539 chr6:31130529 . . 0 hm6A_associated_SNPs_8486 0 0 1 3 31130508 31130530 mRNA hsa-miR-34a TCF19 miRanda miRanda
14034 chr6 31130529 31130529 1 + C T rs139890734 31130539 + 31130519 31130559 41 ACACACCTGCCCATGAGTAGACACAGCAGCGAGCAAATAGG ACACACCTGCTCATGAGTAGACACAGCAGCGAGCAAATAGG < 41bp 1 0.530692075714962 1 0.927437901496887 experiment 0.938615848570076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 11 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130539 chr6:31130529 . . 0 hm6A_associated_SNPs_8486 0 0 1 3 31130508 31130530 mRNA hsa-miR-34c-5p TCF19 miRanda miRanda
14034 chr6 31130529 31130529 1 + C T rs139890734 31130539 + 31130519 31130559 41 ACACACCTGCCCATGAGTAGACACAGCAGCGAGCAAATAGG ACACACCTGCTCATGAGTAGACACAGCAGCGAGCAAATAGG < 41bp 1 0.530692075714962 1 0.927437901496887 experiment 0.938615848570076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 11 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130539 chr6:31130529 . . 0 hm6A_associated_SNPs_8486 0 0 1 3 31130514 31130536 mRNA hsa-miR-330-5p TCF19 miRanda miRanda
14034 chr6 31130593 31130593 1 + G A rs1419881 31130603 + 31130583 31130623 41 TCCCTCCCCAGGAGGGAATGACTACAGGGAAGAAGGATGGA TCCCTCCCCAAGAGGGAATGACTACAGGGAAGAAGGATGGA < 41bp 1 0.694493024583743 1 0.970382571220398 experiment 0.611013950832514 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 11 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130603 chr6:31130593 . . 0 hm6A_associated_SNPs_8487 0 1 1 1 31130588 31130612 mRNA hsa-miR-125a-5p TCF19 miRanda miRanda
14034 chr6 31130594 31130594 1 + G A rs537839952 31130603 + 31130583 31130623 41 TCCCTCCCCAGGAGGGAATGACTACAGGGAAGAAGGATGGA TCCCTCCCCAGAAGGGAATGACTACAGGGAAGAAGGATGGA < 41bp 1 0.718371133501762 1 0.973491907119751 experiment 0.563257732996475 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31130603 chr6:31130594 . . 0 hm6A_associated_SNPs_8488 0 0 1 1 31130588 31130612 mRNA hsa-miR-125a-5p TCF19 miRanda miRanda
14034 chr6 31131698 31131698 1 + T C rs17840023 31131682 + 31131662 31131702 41 CCAGGAATAAAACTTGAGTAACTAATGAGTCACTTATGGGC CCAGGAATAAAACTTGAGTAACTAATGAGTCACTTACGGGC < 41bp 1 0.414412120500862 1 0.859567046165466 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31131682 chr6:31131698 . . 0 hm6A_associated_SNPs_8492 0 0 1 1 31131697 31131717 mRNA hsa-miR-129-5p TCF19 miRanda miRanda
14034 chr6 31131699 31131699 1 + G A rs183609284 31131682 + 31131662 31131702 41 CCAGGAATAAAACTTGAGTAACTAATGAGTCACTTATGGGC CCAGGAATAAAACTTGAGTAACTAATGAGTCACTTATAGGC < 41bp 1 0.393600965616502 1 0.79189121723175 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31131682 chr6:31131699 . . 0 hm6A_associated_SNPs_8493 0 0 1 1 31131697 31131717 mRNA hsa-miR-129-5p TCF19 miRanda miRanda
14034 chr6 31432006 31432006 1 + G A rs2263318 31431995 + 31431975 31432015 41 CTTCCTACTGAGATTACAGAACTGTAGAGATGTCTTTGATT CTTCCTACTGAGATTACAGAACTGTAGAGATATCTTTGATT < 41bp 1 0.465136788926736 1 0.792488276958466 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 HCP5 ENSG00000206337 ncRNA_exonic Human sense_overlapping chr6:31431995 chr6:31432006 . . 0 hm6A_associated_SNPs_8507 0 0 1 1 31431987 31432012 mRNA hsa-miR-186 HCP5 miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478408 31478430 mRNA hsa-miR-302a MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478408 31478430 mRNA hsa-miR-302b MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478408 31478430 mRNA hsa-miR-302c MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478408 31478430 mRNA hsa-miR-302d MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478408 31478430 mRNA hsa-miR-372 MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478408 31478430 mRNA hsa-miR-373 MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478409 31478430 mRNA hsa-miR-520e MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478409 31478430 mRNA hsa-miR-520a-3p MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478409 31478430 mRNA hsa-miR-520b MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478408 31478430 mRNA hsa-miR-520c-3p MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478409 31478430 mRNA hsa-miR-520d-3p MICB miRanda miRanda
14034 chr6 31478430 31478430 1 + C G rs542178412 31478442 + 31478422 31478462 41 AAGCACTTCTCGTACCTCAGACTCCCGAATAGCTGGGATTA AAGCACTTGTCGTACCTCAGACTCCCGAATAGCTGGGATTA < 41bp 1 0.194335732369932 1 0.124413222074509 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MICB ENSG00000204516 UTR3 Human protein_coding chr6:31478442 chr6:31478430 . . 0 hm6A_associated_SNPs_8511 0 0 1 12 31478414 31478430 mRNA hsa-miR-302e MICB miRanda miRanda
14034 chr6 31545631 31545631 1 + T C rs10947218 31545637 + 31545617 31545657 41 TCTGGCCAGAATGCTGCAGGACTTGAGAAGACCTCACCTAG TCTGGCCAGAATGCCGCAGGACTTGAGAAGACCTCACCTAG < 41bp 1 0.299693695760795 1 0.995630443096161 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 TNF ENSG00000232810 UTR3 Human protein_coding chr6:31545637 chr6:31545631 . . 0 hm6A_associated_SNPs_8514 0 0 0 2 31545610 31545634 mRNA hsa-miR-103 TNF miRanda miRanda
14034 chr6 31545631 31545631 1 + T C rs10947218 31545637 + 31545617 31545657 41 TCTGGCCAGAATGCTGCAGGACTTGAGAAGACCTCACCTAG TCTGGCCAGAATGCCGCAGGACTTGAGAAGACCTCACCTAG < 41bp 1 0.299693695760795 1 0.995630443096161 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 TNF ENSG00000232810 UTR3 Human protein_coding chr6:31545637 chr6:31545631 . . 0 hm6A_associated_SNPs_8514 0 0 0 2 31545610 31545634 mRNA hsa-miR-107 TNF miRanda miRanda
14034 chr6 31545631 31545631 1 + T C rs10947218 31545647 + 31545627 31545667 41 ATGCTGCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC ATGCCGCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC < 41bp 1 0.0932542123604783 1 0.987770140171051 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 TNF ENSG00000232810 UTR3 Human protein_coding chr6:31545647 chr6:31545631 . . 0 hm6A_associated_SNPs_8515 0 0 0 2 31545610 31545634 mRNA hsa-miR-103 TNF miRanda miRanda
14034 chr6 31545631 31545631 1 + T C rs10947218 31545647 + 31545627 31545667 41 ATGCTGCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC ATGCCGCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC < 41bp 1 0.0932542123604783 1 0.987770140171051 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 TNF ENSG00000232810 UTR3 Human protein_coding chr6:31545647 chr6:31545631 . . 0 hm6A_associated_SNPs_8515 0 0 0 2 31545610 31545634 mRNA hsa-miR-107 TNF miRanda miRanda
14034 chr6 31802909 31802909 1 + A T rs149369565 31802910 + 31802890 31802930 41 TTCTGGTGTCTTTGCTTGGAACTGACCTAGCTCGTGGCAGG TTCTGGTGTCTTTGCTTGGTACTGACCTAGCTCGTGGCAGG Direct Loss 1 0.228482899304882 1 0.810578286647797 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31802910 chr6:31802909 . . 0 hm6A_associated_SNPs_8540 0 0 1 2 31802896 31802918 mRNA hsa-miR-196a C6orf48 miRanda miRanda
14034 chr6 31802909 31802909 1 + A T rs149369565 31802910 + 31802890 31802930 41 TTCTGGTGTCTTTGCTTGGAACTGACCTAGCTCGTGGCAGG TTCTGGTGTCTTTGCTTGGTACTGACCTAGCTCGTGGCAGG Direct Loss 1 0.228482899304882 1 0.810578286647797 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31802910 chr6:31802909 . . 0 hm6A_associated_SNPs_8540 0 0 1 2 31802893 31802916 mRNA hsa-miR-223 C6orf48 miRanda miRanda
14034 chr6 31802957 31802957 1 + C T rs17201234 31802972 + 31802952 31802992 41 ACAGCCCCTGCTGACTCAAAACAACTGTGAGTGGGGTTGGG ACAGCTCCTGCTGACTCAAAACAACTGTGAGTGGGGTTGGG < 41bp 1 0.322126545287795 1 0.745151400566101 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31802972 chr6:31802957 . . 0 hm6A_associated_SNPs_8542 0 0 1 1 31802944 31802965 mRNA hsa-miR-214 C6orf48 miRanda miRanda
14034 chr6 31805027 31805027 1 + G A rs116044253 31805018 + 31804998 31805038 41 TTTTCACCTTGTTAGAATGAACTCTGGAAGCCCAGCCAGGG TTTTCACCTTGTTAGAATGAACTCTGGAAACCCAGCCAGGG < 41bp 1 0.3694294650109 1 0.860546231269836 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 30 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31805018 chr6:31805027 . . 0 hm6A_associated_SNPs_8543 0 0 1 1 31805027 31805047 mRNA hsa-miR-33a C6orf48 miRanda miRanda
14034 chr6 31805027 31805027 1 + G A rs116044253 31805039 + 31805019 31805059 41 CTCTGGAAGCCCAGCCAGGGACAATGCACCTTCACAGAGAT CTCTGGAAACCCAGCCAGGGACAATGCACCTTCACAGAGAT < 41bp 1 0.462663698281612 1 0.768668353557587 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31805039 chr6:31805027 . . 0 hm6A_associated_SNPs_8544 0 0 1 1 31805027 31805047 mRNA hsa-miR-33a C6orf48 miRanda miRanda
14034 chr6 32944704 32944704 1 + C T rs192648574 32944697 + 32944677 32944717 41 CATCATTAAGCACCCCATGGACCTCAGCACTGTCAAGGTAC CATCATTAAGCACCCCATGGACCTCAGTACTGTCAAGGTAC < 41bp 1 0.68146186305989 1 0.935776233673096 experiment 0.63707627388022 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32944697 chr6:32944704 synonymous SNV . 0 hm6A_associated_SNPs_8571 0 0 1 1 32944704 32944713 mRNA hsa-miR-590-3p BRD2 miRanda miRanda
14034 chr6 32948577 32948577 1 + G C rs147269908 32948583 + 32948563 32948603 41 CCCCTTCCCCCTTTGCTGTGACACTTCTTCATCTCACCCCC CCCCTTCCCCCTTTCCTGTGACACTTCTTCATCTCACCCCC < 41bp 1 0.771362538227849 1 0.416626334190369 experiment 0.457274923544302 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 15 BRD2 ENSG00000204256 UTR3 Human protein_coding chr6:32948583 chr6:32948577 . . 0 hm6A_associated_SNPs_8576 0 0 1 1 32948562 32948584 mRNA hsa-miR-377 BRD2 miRanda miRanda
14034 chr6 33383606 33383606 1 + A G rs150208032 33383622 + 33383602 33383642 41 TCACATTGGTTTCCCCACAGACATCCCTAAAAGTGCCCCCC TCACGTTGGTTTCCCCACAGACATCCCTAAAAGTGCCCCCC < 41bp 1 0.761734340039544 1 0.0330502092838287 experiment 0.476531319920911 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 PHF1 ENSG00000112511 CDS Human protein_coding chr6:33383622 chr6:33383606 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_8597 0 0 1 1 33383599 33383620 mRNA hsa-miR-491-5p PHF1 miRanda miRanda
14034 chr6 34213630 34213630 1 + G A rs532281980 34213620 + 34213600 34213640 41 CATTTTTCCTCTGTTCACAAACTACCTCTGGACAGTTGTGT CATTTTTCCTCTGTTCACAAACTACCTCTGAACAGTTGTGT < 41bp 1 0.487807726211946 1 0.613228619098663 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 HMGA1 ENSG00000137309 UTR3 Human protein_coding chr6:34213620 chr6:34213630 . . 0 hm6A_associated_SNPs_8609 0 0 1 1 34213630 34213652 mRNA hsa-miR-495 HMGA1 miRanda miRanda
14034 chr6 34213630 34213630 1 + G A rs532281980 34213631 + 34213611 34213651 41 TGTTCACAAACTACCTCTGGACAGTTGTGTTGTTTTTTGTT TGTTCACAAACTACCTCTGAACAGTTGTGTTGTTTTTTGTT < 41bp 1 0.600492378445004 1 0.667922496795654 experiment 0.799015243109992 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 HMGA1 ENSG00000137309 UTR3 Human protein_coding chr6:34213631 chr6:34213630 . . 0 hm6A_associated_SNPs_8610 0 0 1 1 34213630 34213652 mRNA hsa-miR-495 HMGA1 miRanda miRanda
14034 chr6 34843770 34843770 1 + A G rs143850613 34843754 + 34843734 34843774 41 AGCACCACTGTCCCTCAAAGACTTCAGCCACTGCACATTAC AGCACCACTGTCCCTCAAAGACTTCAGCCACTGCACGTTAC < 41bp 1 0.140210129865224 1 0.889551222324371 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 UHRF1BP1 ENSG00000065060 UTR3 Human protein_coding chr6:34843754 chr6:34843770 . . 0 hm6A_associated_SNPs_8613 0 0 1 1 34843767 34843788 mRNA hsa-miR-128 UHRF1BP1 miRanda miRanda
14034 chr6 36077480 36077480 1 + G A rs200669191 36077491 + 36077471 36077511 41 TTTTCCCAGGAATATCCCAAACTTCGGAAACAAGTTATTCT TTTTCCCAGAAATATCCCAAACTTCGGAAACAAGTTATTCT < 41bp 1 0.112785031611652 1 0.700192272663116 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MAPK14 ENSG00000112062 UTR3 Human protein_coding chr6:36077491 chr6:36077480 . . 0 hm6A_associated_SNPs_8623 0 0 1 1 36077466 36077488 mRNA hsa-miR-876-5p MAPK14 miRanda miRanda
14034 chr6 36107172 36107172 1 + G A rs2071863 36107181 + 36107161 36107201 41 TGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTAT TGCATGGCACCACCGGCCAGACACTGCCCAAGGACCAGTAT < 41bp 1 0.798504774730834 1 0.994611978530884 experiment 0.402990450538332 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 MAPK13 ENSG00000156711 UTR3 Human protein_coding chr6:36107181 chr6:36107172 . . 0 hm6A_associated_SNPs_8626 0 0 0 4 36107169 36107189 mRNA hsa-miR-34a MAPK13 miRanda miRanda
14034 chr6 36107172 36107172 1 + G A rs2071863 36107181 + 36107161 36107201 41 TGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTAT TGCATGGCACCACCGGCCAGACACTGCCCAAGGACCAGTAT < 41bp 1 0.798504774730834 1 0.994611978530884 experiment 0.402990450538332 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 MAPK13 ENSG00000156711 UTR3 Human protein_coding chr6:36107181 chr6:36107172 . . 0 hm6A_associated_SNPs_8626 0 0 0 4 36107169 36107189 mRNA hsa-miR-34c-5p MAPK13 miRanda miRanda
14034 chr6 36107172 36107172 1 + G A rs2071863 36107181 + 36107161 36107201 41 TGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTAT TGCATGGCACCACCGGCCAGACACTGCCCAAGGACCAGTAT < 41bp 1 0.798504774730834 1 0.994611978530884 experiment 0.402990450538332 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 MAPK13 ENSG00000156711 UTR3 Human protein_coding chr6:36107181 chr6:36107172 . . 0 hm6A_associated_SNPs_8626 0 0 0 4 36107168 36107189 mRNA hsa-miR-449a MAPK13 miRanda miRanda
14034 chr6 36107172 36107172 1 + G A rs2071863 36107181 + 36107161 36107201 41 TGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTAT TGCATGGCACCACCGGCCAGACACTGCCCAAGGACCAGTAT < 41bp 1 0.798504774730834 1 0.994611978530884 experiment 0.402990450538332 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 MAPK13 ENSG00000156711 UTR3 Human protein_coding chr6:36107181 chr6:36107172 . . 0 hm6A_associated_SNPs_8626 0 0 0 4 36107168 36107189 mRNA hsa-miR-449b MAPK13 miRanda miRanda
14034 chr6 36570111 36570111 1 + C T rs145617763 36570125 + 36570105 36570145 41 AAACAACTGGCAAAAATTGAACTAAGATTTACTTTTTTTTC AAACAATTGGCAAAAATTGAACTAAGATTTACTTTTTTTTC < 41bp 1 0.403731396196179 1 0.775540828704834 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 SRSF3 ENSG00000112081 UTR3 Human protein_coding chr6:36570125 chr6:36570111 . . 0 hm6A_associated_SNPs_8644 0 0 1 1 36570101 36570121 mRNA hsa-miR-129-5p SFRS3 miRanda miRanda
14034 chr6 37142357 37142357 1 + C A rs568186271 37142352 + 37142332 37142372 41 GTGCTGGGAGAAATACTTGAACTTGCCTCTTTTACCTGCTG GTGCTGGGAGAAATACTTGAACTTGACTCTTTTACCTGCTG < 41bp 1 0.690863339781516 1 0.798061847686768 experiment 0.618273320436968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142352 chr6:37142357 . . 0 hm6A_associated_SNPs_8662 0 0 1 7 37142354 37142375 mRNA hsa-miR-15a PIM1 miRanda miRanda
14034 chr6 37142357 37142357 1 + C A rs568186271 37142352 + 37142332 37142372 41 GTGCTGGGAGAAATACTTGAACTTGCCTCTTTTACCTGCTG GTGCTGGGAGAAATACTTGAACTTGACTCTTTTACCTGCTG < 41bp 1 0.690863339781516 1 0.798061847686768 experiment 0.618273320436968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142352 chr6:37142357 . . 0 hm6A_associated_SNPs_8662 0 0 1 7 37142354 37142375 mRNA hsa-miR-16 PIM1 miRanda miRanda
14034 chr6 37142357 37142357 1 + C A rs568186271 37142352 + 37142332 37142372 41 GTGCTGGGAGAAATACTTGAACTTGCCTCTTTTACCTGCTG GTGCTGGGAGAAATACTTGAACTTGACTCTTTTACCTGCTG < 41bp 1 0.690863339781516 1 0.798061847686768 experiment 0.618273320436968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142352 chr6:37142357 . . 0 hm6A_associated_SNPs_8662 0 0 1 7 37142353 37142373 mRNA hsa-miR-214 PIM1 miRanda miRanda
14034 chr6 37142357 37142357 1 + C A rs568186271 37142352 + 37142332 37142372 41 GTGCTGGGAGAAATACTTGAACTTGCCTCTTTTACCTGCTG GTGCTGGGAGAAATACTTGAACTTGACTCTTTTACCTGCTG < 41bp 1 0.690863339781516 1 0.798061847686768 experiment 0.618273320436968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142352 chr6:37142357 . . 0 hm6A_associated_SNPs_8662 0 0 1 7 37142354 37142375 mRNA hsa-miR-15b PIM1 miRanda miRanda
14034 chr6 37142357 37142357 1 + C A rs568186271 37142352 + 37142332 37142372 41 GTGCTGGGAGAAATACTTGAACTTGCCTCTTTTACCTGCTG GTGCTGGGAGAAATACTTGAACTTGACTCTTTTACCTGCTG < 41bp 1 0.690863339781516 1 0.798061847686768 experiment 0.618273320436968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142352 chr6:37142357 . . 0 hm6A_associated_SNPs_8662 0 0 1 7 37142355 37142375 mRNA hsa-miR-195 PIM1 miRanda miRanda
14034 chr6 37142357 37142357 1 + C A rs568186271 37142352 + 37142332 37142372 41 GTGCTGGGAGAAATACTTGAACTTGCCTCTTTTACCTGCTG GTGCTGGGAGAAATACTTGAACTTGACTCTTTTACCTGCTG < 41bp 1 0.690863339781516 1 0.798061847686768 experiment 0.618273320436968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142352 chr6:37142357 . . 0 hm6A_associated_SNPs_8662 0 0 1 7 37142354 37142375 mRNA hsa-miR-424 PIM1 miRanda miRanda
14034 chr6 37142357 37142357 1 + C A rs568186271 37142352 + 37142332 37142372 41 GTGCTGGGAGAAATACTTGAACTTGCCTCTTTTACCTGCTG GTGCTGGGAGAAATACTTGAACTTGACTCTTTTACCTGCTG < 41bp 1 0.690863339781516 1 0.798061847686768 experiment 0.618273320436968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142352 chr6:37142357 . . 0 hm6A_associated_SNPs_8662 0 0 1 7 37142355 37142375 mRNA hsa-miR-497 PIM1 miRanda miRanda
14034 chr6 37299648 37299648 1 + G A rs45606431 37299640 + 37299620 37299660 41 GTCCAGACGAGCCCCATCAAACTAGTTGGGAAGGGCCCCAG GTCCAGACGAGCCCCATCAAACTAGTTGAGAAGGGCCCCAG < 41bp 1 0.482794340711825 1 0.283334612846375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TBC1D22B ENSG00000065491 UTR3 Human protein_coding chr6:37299640 chr6:37299648 . . 0 hm6A_associated_SNPs_8666 0 0 1 1 37299645 37299668 mRNA hsa-miR-96 TBC1D22B miRanda miRanda
14034 chr6 37448223 37448223 1 + G C rs116002930 37448214 + 37448194 37448234 41 CAGTGCCTAGGGCACGTGGGACTGATGGAGGACATATCAGA CAGTGCCTAGGGCACGTGGGACTGATGGACGACATATCAGA < 41bp 1 0.59899960305361 1 0.966124057769775 experiment 0.802000793892781 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 CMTR1 ENSG00000137200 UTR3 Human protein_coding chr6:37448214 chr6:37448223 . . 0 hm6A_associated_SNPs_8675 0 0 1 2 37448213 37448232 mRNA hsa-miR-190 FTSJD2 miRanda miRanda
14034 chr6 37448223 37448223 1 + G C rs116002930 37448214 + 37448194 37448234 41 CAGTGCCTAGGGCACGTGGGACTGATGGAGGACATATCAGA CAGTGCCTAGGGCACGTGGGACTGATGGACGACATATCAGA < 41bp 1 0.59899960305361 1 0.966124057769775 experiment 0.802000793892781 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 CMTR1 ENSG00000137200 UTR3 Human protein_coding chr6:37448214 chr6:37448223 . . 0 hm6A_associated_SNPs_8675 0 0 1 2 37448212 37448232 mRNA hsa-miR-190b FTSJD2 miRanda miRanda
14034 chr6 37448223 37448223 1 + G C rs116002930 37448225 + 37448205 37448245 41 GCACGTGGGACTGATGGAGGACATATCAGAGTGGCAGAGCT GCACGTGGGACTGATGGACGACATATCAGAGTGGCAGAGCT Direct Loss 1 0.446991386011892 1 0.665721714496613 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 CMTR1 ENSG00000137200 UTR3 Human protein_coding chr6:37448225 chr6:37448223 . . 0 hm6A_associated_SNPs_8676 0 0 1 2 37448213 37448232 mRNA hsa-miR-190 FTSJD2 miRanda miRanda
14034 chr6 37448223 37448223 1 + G C rs116002930 37448225 + 37448205 37448245 41 GCACGTGGGACTGATGGAGGACATATCAGAGTGGCAGAGCT GCACGTGGGACTGATGGACGACATATCAGAGTGGCAGAGCT Direct Loss 1 0.446991386011892 1 0.665721714496613 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 CMTR1 ENSG00000137200 UTR3 Human protein_coding chr6:37448225 chr6:37448223 . . 0 hm6A_associated_SNPs_8676 0 0 1 2 37448212 37448232 mRNA hsa-miR-190b FTSJD2 miRanda miRanda
14034 chr6 38121743 38121743 1 + C A rs191923274 38121730 + 38121710 38121750 41 GTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAATGTT GTCTGCAAATTAACAGCTGAACACCTGCAACTGAAAATGTT < 41bp 1 0.201150408468825 1 0.587498426437378 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 34 ZFAND3 ENSG00000156639 UTR3 Human protein_coding chr6:38121730 chr6:38121743 . . 0 hm6A_associated_SNPs_8681 0 0 1 1 38121724 38121745 mRNA hsa-miR-33a ZFAND3 miRanda miRanda
14034 chr6 41065581 41065581 1 + A C rs535360885 41065593 + 41065573 41065613 41 GGTGGGGGAATCTCACACTGACTAACTGAATGGACGCTTTG GGTGGGGGCATCTCACACTGACTAACTGAATGGACGCTTTG < 41bp 1 0.784702950904785 1 0.994713664054871 experiment 0.430594098190429 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 NFYA ENSG00000001167 UTR3 Human protein_coding chr6:41065593 chr6:41065581 . . 0 hm6A_associated_SNPs_8684 0 0 1 1 41065571 41065593 mRNA hsa-miR-125a-3p NFYA miRanda miRanda
14034 chr6 41065581 41065581 1 + A C rs535360885 41065597 + 41065577 41065617 41 GGGGAATCTCACACTGACTAACTGAATGGACGCTTTGTATT GGGGCATCTCACACTGACTAACTGAATGGACGCTTTGTATT < 41bp 1 0.697153306124688 1 0.997201383113861 experiment 0.605693387750624 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 NFYA ENSG00000001167 UTR3 Human protein_coding chr6:41065597 chr6:41065581 . . 0 hm6A_associated_SNPs_8685 0 0 1 1 41065571 41065593 mRNA hsa-miR-125a-3p NFYA miRanda miRanda
14034 chr6 41754936 41754936 1 + C T rs114149714 41754945 + 41754925 41754965 41 ACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCA ACAAGGCTAGCTTCCCCCTAACAATCCTAGACTGAGACGCA < 41bp 1 0.567285358501578 1 0.986983299255371 experiment 0.865429282996845 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 PRICKLE4 ENSG00000124593 UTR3 Human protein_coding chr6:41754945 chr6:41754936 . . 0 hm6A_associated_SNPs_8688 0 0 1 2 41754919 41754939 mRNA hsa-let-7i PRICKLE4 miRanda miRanda
14034 chr6 41754936 41754936 1 + C T rs114149714 41754945 + 41754925 41754965 41 ACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCA ACAAGGCTAGCTTCCCCCTAACAATCCTAGACTGAGACGCA < 41bp 1 0.567285358501578 1 0.986983299255371 experiment 0.865429282996845 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 PRICKLE4 ENSG00000124593 UTR3 Human protein_coding chr6:41754945 chr6:41754936 . . 0 hm6A_associated_SNPs_8688 0 0 1 2 41754919 41754939 mRNA hsa-let-7i TOMM6 miRanda miRanda
14034 chr6 41900538 41900538 1 + G A rs114731913 41900539 + 41900519 41900559 41 CTGAGCTTTAATGGCTGAAGACCCAGATCAGGGCAGTGACA CTGAGCTTTAATGGCTGAAAACCCAGATCAGGGCAGTGACA < 41bp 1 0.428410661654451 1 0.985008835792542 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 20 BYSL ENSG00000112578 UTR3 Human protein_coding chr6:41900539 chr6:41900538 . . 0 hm6A_associated_SNPs_8690 0 0 1 1 41900533 41900554 mRNA hsa-miR-874 BYSL miRanda miRanda
14034 chr6 41900538 41900538 1 + G A rs114731913 41900557 + 41900537 41900577 41 AGACCCAGATCAGGGCAGTGACAGATCACAGGGACATCTGT AAACCCAGATCAGGGCAGTGACAGATCACAGGGACATCTGT < 41bp 1 0.61274588085027 1 0.984522700309753 experiment 0.77450823829946 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 2 BYSL ENSG00000112578 UTR3 Human protein_coding chr6:41900557 chr6:41900538 . . 0 hm6A_associated_SNPs_8691 0 0 1 1 41900533 41900554 mRNA hsa-miR-874 BYSL miRanda miRanda
14034 chr6 41900753 41900753 1 + G T rs577649257 41900769 + 41900749 41900789 41 CACTGTGGATAAAGGCAAAGACAGATATTTATTGAACCTCT CACTTTGGATAAAGGCAAAGACAGATATTTATTGAACCTCT < 41bp 1 0.559354574978576 1 0.100881397724152 experiment 0.881290850042848 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 5 BYSL ENSG00000112578 UTR3 Human protein_coding chr6:41900769 chr6:41900753 . . 0 hm6A_associated_SNPs_8692 0 0 1 1 41900737 41900756 mRNA hsa-miR-128 BYSL miRanda miRanda
14034 chr6 42610210 42610210 1 + A G rs182207673 42610197 + 42610177 42610217 41 ATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTC ATGCAGACGTGAGATGTTTGACAAGGATGTAGTGATGCTTC < 41bp 1 0.690540917261694 1 0.0250823199748993 experiment 0.618918165476611 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42610197 chr6:42610210 synonymous SNV . 0 hm6A_associated_SNPs_8697 0 0 1 1 42610203 42610219 mRNA hsa-miR-653 UBR2 miRanda miRanda
14034 chr6 42985625 42985625 1 + G A rs190196844 42985626 + 42985606 42985646 41 TCACACCCCGAGTGTCAGGGACAGTTCCTGGGGCCCGGGAT TCACACCCCGAGTGTCAGGAACAGTTCCTGGGGCCCGGGAT < 41bp 1 0.702626699854049 1 0.0421647727489471 experiment 0.594746600291902 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985626 chr6:42985625 synonymous SNV . 0 hm6A_associated_SNPs_8708 0 0 1 1 42985607 42985629 mRNA hsa-miR-874 KLHDC3 miRanda miRanda
14034 chr6 43148052 43148052 1 + C A rs55848540 43148035 + 43148015 43148055 41 GCGTCAGGCAGAGGCAACTGACTTCATTTGTGCCACACGCA GCGTCAGGCAGAGGCAACTGACTTCATTTGTGCCACAAGCA < 41bp 1 0.2305473366678 1 0.244913518428802 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 38 SRF ENSG00000112658 UTR3 Human protein_coding chr6:43148035 chr6:43148052 . . 0 hm6A_associated_SNPs_8715 0 0 1 1 43148043 43148064 mRNA hsa-miR-365 SRF miRanda miRanda
14034 chr6 43581724 43581724 1 + A C rs138752565 43581716 + 43581696 43581736 41 AGCCCTCATTACCTTTTCAAACCAGTCAAAGTACAGGAACT AGCCCTCATTACCTTTTCAAACCAGTCACAGTACAGGAACT < 41bp 1 0.59110889866568 1 0.973820269107819 experiment 0.81778220266864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;Control 29 POLH ENSG00000170734 CDS Human protein_coding chr6:43581716 chr6:43581724 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_8725 0 0 1 2 43581721 43581742 mRNA hsa-miR-24 POLH miRanda miRanda
14034 chr6 43581724 43581724 1 + A C rs138752565 43581716 + 43581696 43581736 41 AGCCCTCATTACCTTTTCAAACCAGTCAAAGTACAGGAACT AGCCCTCATTACCTTTTCAAACCAGTCACAGTACAGGAACT < 41bp 1 0.59110889866568 1 0.973820269107819 experiment 0.81778220266864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;Control 29 POLH ENSG00000170734 CDS Human protein_coding chr6:43581716 chr6:43581724 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_8725 0 0 1 2 43581711 43581733 mRNA hsa-miR-486-5p POLH miRanda miRanda
14034 chr6 43608625 43608625 1 + T C rs568153675 43608622 + 43608602 43608642 41 TTTCAGAATTTTTACCAGGAACATAATGTGGATGTGACTTA TTTCAGAATTTTTACCAGGAACACAATGTGGATGTGACTTA < 41bp 1 0.730358718052216 1 0.457617849111557 experiment 0.539282563895567 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 MAD2L1BP ENSG00000124688 UTR3 Human protein_coding chr6:43608622 chr6:43608625 . . 0 hm6A_associated_SNPs_8728 0 0 1 3 43608619 43608639 mRNA hsa-miR-23a MAD2L1BP miRanda miRanda
14034 chr6 43608625 43608625 1 + T C rs568153675 43608622 + 43608602 43608642 41 TTTCAGAATTTTTACCAGGAACATAATGTGGATGTGACTTA TTTCAGAATTTTTACCAGGAACACAATGTGGATGTGACTTA < 41bp 1 0.730358718052216 1 0.457617849111557 experiment 0.539282563895567 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 MAD2L1BP ENSG00000124688 UTR3 Human protein_coding chr6:43608622 chr6:43608625 . . 0 hm6A_associated_SNPs_8728 0 0 1 3 43608622 43608642 mRNA hsa-miR-224 MAD2L1BP miRanda miRanda
14034 chr6 43608625 43608625 1 + T C rs568153675 43608622 + 43608602 43608642 41 TTTCAGAATTTTTACCAGGAACATAATGTGGATGTGACTTA TTTCAGAATTTTTACCAGGAACACAATGTGGATGTGACTTA < 41bp 1 0.730358718052216 1 0.457617849111557 experiment 0.539282563895567 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 MAD2L1BP ENSG00000124688 UTR3 Human protein_coding chr6:43608622 chr6:43608625 . . 0 hm6A_associated_SNPs_8728 0 0 1 3 43608619 43608639 mRNA hsa-miR-23b MAD2L1BP miRanda miRanda
14034 chr6 43608625 43608625 1 + T C rs568153675 43608638 + 43608618 43608658 41 AGGAACATAATGTGGATGTGACTTATGAACTTAAATATAAA AGGAACACAATGTGGATGTGACTTATGAACTTAAATATAAA < 41bp 1 0.26735857237456 1 0.256784677505493 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 MAD2L1BP ENSG00000124688 UTR3 Human protein_coding chr6:43608638 chr6:43608625 . . 0 hm6A_associated_SNPs_8729 0 0 1 3 43608619 43608639 mRNA hsa-miR-23a MAD2L1BP miRanda miRanda
14034 chr6 43608625 43608625 1 + T C rs568153675 43608638 + 43608618 43608658 41 AGGAACATAATGTGGATGTGACTTATGAACTTAAATATAAA AGGAACACAATGTGGATGTGACTTATGAACTTAAATATAAA < 41bp 1 0.26735857237456 1 0.256784677505493 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 MAD2L1BP ENSG00000124688 UTR3 Human protein_coding chr6:43608638 chr6:43608625 . . 0 hm6A_associated_SNPs_8729 0 0 1 3 43608622 43608642 mRNA hsa-miR-224 MAD2L1BP miRanda miRanda
14034 chr6 43608625 43608625 1 + T C rs568153675 43608638 + 43608618 43608658 41 AGGAACATAATGTGGATGTGACTTATGAACTTAAATATAAA AGGAACACAATGTGGATGTGACTTATGAACTTAAATATAAA < 41bp 1 0.26735857237456 1 0.256784677505493 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 MAD2L1BP ENSG00000124688 UTR3 Human protein_coding chr6:43608638 chr6:43608625 . . 0 hm6A_associated_SNPs_8729 0 0 1 3 43608619 43608639 mRNA hsa-miR-23b MAD2L1BP miRanda miRanda
14034 chr6 43753548 43753548 1 + T A rs188186771 43753563 + 43753543 43753583 41 CTTTTTAATTAGAAATTAAAACAGTTAATTTAATTAAAGAG CTTTTAAATTAGAAATTAAAACAGTTAATTTAATTAAAGAG < 41bp 1 0.499868148176903 1 0.0434480309486389 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 VEGFA ENSG00000112715 UTR3 Human protein_coding chr6:43753563 chr6:43753548 . . 0 hm6A_associated_SNPs_8742 0 0 1 1 43753548 43753569 mRNA hsa-miR-451 VEGFA miRanda miRanda
14034 chr6 47594192 47594192 1 + C T rs200997555 47594211 + 47594191 47594231 41 TCTACGTGTGAGTATAAAAGACAAAAGTTGAACAGCATGGA TTTACGTGTGAGTATAAAAGACAAAAGTTGAACAGCATGGA < 41bp 1 0.198353237235467 1 0.455478191375732 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 CD2AP ENSG00000198087 UTR3 Human protein_coding chr6:47594211 chr6:47594192 . . 0 hm6A_associated_SNPs_8768 0 0 1 1 47594179 47594203 mRNA hsa-miR-342-3p CD2AP miRanda miRanda
14034 chr6 49460742 49460742 1 + C G rs189396607 49460745 + 49460725 49460765 41 TGTATAAAAAATTATTTCTAACAAACTACAGTATACTGTCT TGTATAAAAAATTATTTGTAACAAACTACAGTATACTGTCT < 41bp 1 0.104052516392081 1 0.00577467679977417 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 18 CENPQ ENSG00000031691 UTR3 Human protein_coding chr6:49460745 chr6:49460742 . . 0 hm6A_associated_SNPs_8771 0 0 1 2 49460724 49460745 mRNA hsa-miR-539 CENPQ miRanda miRanda
14034 chr6 49460742 49460742 1 + C G rs189396607 49460745 + 49460725 49460765 41 TGTATAAAAAATTATTTCTAACAAACTACAGTATACTGTCT TGTATAAAAAATTATTTGTAACAAACTACAGTATACTGTCT < 41bp 1 0.104052516392081 1 0.00577467679977417 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 18 CENPQ ENSG00000031691 UTR3 Human protein_coding chr6:49460745 chr6:49460742 . . 0 hm6A_associated_SNPs_8771 0 0 1 2 49460727 49460748 mRNA hsa-miR-653 CENPQ miRanda miRanda
14034 chr6 49460742 49460742 1 + C G rs189396607 49460749 + 49460729 49460769 41 TAAAAAATTATTTCTAACAAACTACAGTATACTGTCTTGGG TAAAAAATTATTTGTAACAAACTACAGTATACTGTCTTGGG < 41bp 1 0.0370483462889206 1 0.00552168488502502 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 14 CENPQ ENSG00000031691 UTR3 Human protein_coding chr6:49460749 chr6:49460742 . . 0 hm6A_associated_SNPs_8772 0 0 1 2 49460724 49460745 mRNA hsa-miR-539 CENPQ miRanda miRanda
14034 chr6 49460742 49460742 1 + C G rs189396607 49460749 + 49460729 49460769 41 TAAAAAATTATTTCTAACAAACTACAGTATACTGTCTTGGG TAAAAAATTATTTGTAACAAACTACAGTATACTGTCTTGGG < 41bp 1 0.0370483462889206 1 0.00552168488502502 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 14 CENPQ ENSG00000031691 UTR3 Human protein_coding chr6:49460749 chr6:49460742 . . 0 hm6A_associated_SNPs_8772 0 0 1 2 49460727 49460748 mRNA hsa-miR-653 CENPQ miRanda miRanda
14034 chr6 52269733 52269733 1 + G C rs80028877 52269729 + 52269709 52269749 41 CTTGCATGGTAATATAAAGGACTAGGAAGCAGTCATACTTC CTTGCATGGTAATATAAAGGACTACGAAGCAGTCATACTTC < 41bp 1 0.450927978447511 1 0.967050194740295 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 25 PAQR8 ENSG00000170915 UTR3 Human protein_coding chr6:52269729 chr6:52269733 . . 0 hm6A_associated_SNPs_8777 0 0 1 1 52269718 52269737 mRNA hsa-miR-384 PAQR8 miRanda miRanda
14034 chr6 52442988 52442988 1 + G A rs147511949 52443008 + 52442988 52443028 41 GTCTGTAATTCCCTTATCTGACTCTCAAGGAAATGACAAAG ATCTGTAATTCCCTTATCTGACTCTCAAGGAAATGACAAAG < 41bp 1 0.550741021360044 1 0.128266960382462 experiment 0.898517957279911 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 TRAM2-AS1 ENSG00000225791 ncRNA_exonic Human lincRNA chr6:52443008 chr6:52442988 . . 0 hm6A_associated_SNPs_8778 0 0 1 1 52442988 52443012 mRNA hsa-miR-383 FLJ37798 miRanda miRanda
14034 chr6 52443012 52443012 1 + T A rs372446748 52443008 + 52442988 52443028 41 GTCTGTAATTCCCTTATCTGACTCTCAAGGAAATGACAAAG GTCTGTAATTCCCTTATCTGACTCACAAGGAAATGACAAAG < 41bp 1 0.5321974812018 1 0.0560493469238281 experiment 0.935605037596401 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 TRAM2-AS1 ENSG00000225791 ncRNA_exonic Human lincRNA chr6:52443008 chr6:52443012 . . 0 hm6A_associated_SNPs_8779 0 0 0 1 52442988 52443012 mRNA hsa-miR-383 FLJ37798 miRanda miRanda
14034 chr6 52551010 52551010 1 + G A rs11543265 52551022 + 52551002 52551042 41 TTTCTAAAGCAAAAATTTTAACTGTTTTCTAATTGTCAAGC TTTCTAAAACAAAAATTTTAACTGTTTTCTAATTGTCAAGC < 41bp 1 0.197860404457386 1 0.287831097841263 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 TMEM14A ENSG00000096092 UTR3 Human protein_coding chr6:52551022 chr6:52551010 . . 0 hm6A_associated_SNPs_8781 0 0 1 3 52550999 52551017 mRNA hsa-miR-129-5p TMEM14A miRanda miRanda
14034 chr6 52551010 52551010 1 + G A rs11543265 52551022 + 52551002 52551042 41 TTTCTAAAGCAAAAATTTTAACTGTTTTCTAATTGTCAAGC TTTCTAAAACAAAAATTTTAACTGTTTTCTAATTGTCAAGC < 41bp 1 0.197860404457386 1 0.287831097841263 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 TMEM14A ENSG00000096092 UTR3 Human protein_coding chr6:52551022 chr6:52551010 . . 0 hm6A_associated_SNPs_8781 0 0 1 3 52551008 52551028 mRNA hsa-miR-212 TMEM14A miRanda miRanda
14034 chr6 52551010 52551010 1 + G A rs11543265 52551022 + 52551002 52551042 41 TTTCTAAAGCAAAAATTTTAACTGTTTTCTAATTGTCAAGC TTTCTAAAACAAAAATTTTAACTGTTTTCTAATTGTCAAGC < 41bp 1 0.197860404457386 1 0.287831097841263 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 TMEM14A ENSG00000096092 UTR3 Human protein_coding chr6:52551022 chr6:52551010 . . 0 hm6A_associated_SNPs_8781 0 0 1 3 52551007 52551028 mRNA hsa-miR-132 TMEM14A miRanda miRanda
14034 chr6 57033318 57033318 1 + C A rs192633113 57033308 + 57033288 57033328 41 CATCAAGTGGCCTTGAAGAGACTGAGATAACGAATTCTTGA CATCAAGTGGCCTTGAAGAGACTGAGATAAAGAATTCTTGA < 41bp 1 0.205232137799176 1 0.958117842674255 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 31 LOC101927211 ENSG00000226803 ncRNA_intronic Human antisense chr6:57033308 chr6:57033318 . . 0 hm6A_associated_SNPs_8787 0 0 1 1 57033317 57033336 mRNA hsa-miR-495 ZNF451 miRanda miRanda
14034 chr6 57049592 57049592 1 + A G rs527952717 57049609 + 57049589 57049629 41 CCTATAATTTACCACTGTGAACAATTATATATCTATCTGCT CCTGTAATTTACCACTGTGAACAATTATATATCTATCTGCT < 41bp 1 0.62692016031974 1 0.607770681381226 experiment 0.746159679360519 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 BAG2 ENSG00000112208 UTR3 Human protein_coding chr6:57049609 chr6:57049592 . . 0 hm6A_associated_SNPs_8789 0 0 1 3 57049590 57049609 mRNA hsa-miR-27a BAG2 miRanda miRanda
14034 chr6 57049592 57049592 1 + A G rs527952717 57049609 + 57049589 57049629 41 CCTATAATTTACCACTGTGAACAATTATATATCTATCTGCT CCTGTAATTTACCACTGTGAACAATTATATATCTATCTGCT < 41bp 1 0.62692016031974 1 0.607770681381226 experiment 0.746159679360519 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 BAG2 ENSG00000112208 UTR3 Human protein_coding chr6:57049609 chr6:57049592 . . 0 hm6A_associated_SNPs_8789 0 0 1 3 57049590 57049609 mRNA hsa-miR-27b BAG2 miRanda miRanda
14034 chr6 57049592 57049592 1 + A G rs527952717 57049609 + 57049589 57049629 41 CCTATAATTTACCACTGTGAACAATTATATATCTATCTGCT CCTGTAATTTACCACTGTGAACAATTATATATCTATCTGCT < 41bp 1 0.62692016031974 1 0.607770681381226 experiment 0.746159679360519 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 BAG2 ENSG00000112208 UTR3 Human protein_coding chr6:57049609 chr6:57049592 . . 0 hm6A_associated_SNPs_8789 0 0 1 3 57049588 57049608 mRNA hsa-miR-128 BAG2 miRanda miRanda
14034 chr6 64290237 64290237 1 + C T rs73449618 64290223 + 64290203 64290243 41 TTTACCAGGCCTCAAGCTAGACAGATTTGGCAACCTCTGTA TTTACCAGGCCTCAAGCTAGACAGATTTGGCAACTTCTGTA < 41bp 1 0.570102152558139 1 0.320960402488708 experiment 0.859795694883722 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PTP4A1 ENSG00000112245 UTR3 Human protein_coding chr6:64290223 chr6:64290237 . . 0 hm6A_associated_SNPs_8794 0 0 1 2 64290221 64290245 mRNA hsa-miR-381 PTP4A1 miRanda miRanda
14034 chr6 64290237 64290237 1 + C T rs73449618 64290223 + 64290203 64290243 41 TTTACCAGGCCTCAAGCTAGACAGATTTGGCAACCTCTGTA TTTACCAGGCCTCAAGCTAGACAGATTTGGCAACTTCTGTA < 41bp 1 0.570102152558139 1 0.320960402488708 experiment 0.859795694883722 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 PTP4A1 ENSG00000112245 UTR3 Human protein_coding chr6:64290223 chr6:64290237 . . 0 hm6A_associated_SNPs_8794 0 0 1 2 64290221 64290245 mRNA hsa-miR-300 PTP4A1 miRanda miRanda
14034 chr6 64395917 64395917 1 + A G rs548705343 64395921 + 64395901 64395941 41 ACATTATTTGATACACAGAGACCTGTGCAAAAACAAAAAGC ACATTATTTGATACACGGAGACCTGTGCAAAAACAAAAAGC < 41bp 1 0.279367353178032 1 0.946236133575439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64395921 chr6:64395917 . . 0 hm6A_associated_SNPs_8797 0 0 1 1 64395916 64395934 mRNA hsa-miR-129-5p PHF3 miRanda miRanda
14034 chr6 64423635 64423635 1 + A C rs181368118 64423639 + 64423619 64423659 41 TTCAGGATTACATTTAAATAACTGTTAAAATGTTGTATCTT TTCAGGATTACATTTACATAACTGTTAAAATGTTGTATCTT < 41bp 1 0.578508713808989 1 0.921194016933441 experiment 0.842982572382022 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423639 chr6:64423635 . . 0 hm6A_associated_SNPs_8804 0 0 1 6 64423625 64423645 mRNA hsa-miR-212 PHF3 miRanda miRanda
14034 chr6 64423635 64423635 1 + A C rs181368118 64423639 + 64423619 64423659 41 TTCAGGATTACATTTAAATAACTGTTAAAATGTTGTATCTT TTCAGGATTACATTTACATAACTGTTAAAATGTTGTATCTT < 41bp 1 0.578508713808989 1 0.921194016933441 experiment 0.842982572382022 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423639 chr6:64423635 . . 0 hm6A_associated_SNPs_8804 0 0 1 6 64423624 64423645 mRNA hsa-miR-132 PHF3 miRanda miRanda
14034 chr6 64423635 64423635 1 + A C rs181368118 64423639 + 64423619 64423659 41 TTCAGGATTACATTTAAATAACTGTTAAAATGTTGTATCTT TTCAGGATTACATTTACATAACTGTTAAAATGTTGTATCTT < 41bp 1 0.578508713808989 1 0.921194016933441 experiment 0.842982572382022 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423639 chr6:64423635 . . 0 hm6A_associated_SNPs_8804 0 0 1 6 64423625 64423644 mRNA hsa-miR-144 PHF3 miRanda miRanda
14034 chr6 64423635 64423635 1 + A C rs181368118 64423639 + 64423619 64423659 41 TTCAGGATTACATTTAAATAACTGTTAAAATGTTGTATCTT TTCAGGATTACATTTACATAACTGTTAAAATGTTGTATCTT < 41bp 1 0.578508713808989 1 0.921194016933441 experiment 0.842982572382022 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423639 chr6:64423635 . . 0 hm6A_associated_SNPs_8804 0 0 1 6 64423625 64423647 mRNA hsa-miR-194 PHF3 miRanda miRanda
14034 chr6 64423635 64423635 1 + A C rs181368118 64423639 + 64423619 64423659 41 TTCAGGATTACATTTAAATAACTGTTAAAATGTTGTATCTT TTCAGGATTACATTTACATAACTGTTAAAATGTTGTATCTT < 41bp 1 0.578508713808989 1 0.921194016933441 experiment 0.842982572382022 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423639 chr6:64423635 . . 0 hm6A_associated_SNPs_8804 0 0 1 6 64423624 64423647 mRNA hsa-miR-421 PHF3 miRanda miRanda
14034 chr6 64423635 64423635 1 + A C rs181368118 64423639 + 64423619 64423659 41 TTCAGGATTACATTTAAATAACTGTTAAAATGTTGTATCTT TTCAGGATTACATTTACATAACTGTTAAAATGTTGTATCTT < 41bp 1 0.578508713808989 1 0.921194016933441 experiment 0.842982572382022 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423639 chr6:64423635 . . 0 hm6A_associated_SNPs_8804 0 0 1 6 64423632 64423653 mRNA hsa-miR-543 PHF3 miRanda miRanda
14034 chr6 64423682 64423682 1 + G A rs150612044 64423664 + 64423644 64423684 41 TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTGCT TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTACT < 41bp 1 0.734904405784165 1 0.8590167760849 experiment 0.530191188431671 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 39 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423664 chr6:64423682 . . 0 hm6A_associated_SNPs_8805 0 0 1 5 64423669 64423698 mRNA hsa-miR-96 PHF3 miRanda miRanda
14034 chr6 64423682 64423682 1 + G A rs150612044 64423664 + 64423644 64423684 41 TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTGCT TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTACT < 41bp 1 0.734904405784165 1 0.8590167760849 experiment 0.530191188431671 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 39 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423664 chr6:64423682 . . 0 hm6A_associated_SNPs_8805 0 0 1 5 64423675 64423698 mRNA hsa-miR-183 PHF3 miRanda miRanda
14034 chr6 64423682 64423682 1 + G A rs150612044 64423664 + 64423644 64423684 41 TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTGCT TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTACT < 41bp 1 0.734904405784165 1 0.8590167760849 experiment 0.530191188431671 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 39 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423664 chr6:64423682 . . 0 hm6A_associated_SNPs_8805 0 0 1 5 64423664 64423685 mRNA hsa-miR-15b PHF3 miRanda miRanda
14034 chr6 64423682 64423682 1 + G A rs150612044 64423664 + 64423644 64423684 41 TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTGCT TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTACT < 41bp 1 0.734904405784165 1 0.8590167760849 experiment 0.530191188431671 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 39 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423664 chr6:64423682 . . 0 hm6A_associated_SNPs_8805 0 0 1 5 64423663 64423685 mRNA hsa-miR-424 PHF3 miRanda miRanda
14034 chr6 64423682 64423682 1 + G A rs150612044 64423664 + 64423644 64423684 41 TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTGCT TAAAATGTTGTATCTTGTAAACAAAAGAAAGATTGCCTACT < 41bp 1 0.734904405784165 1 0.8590167760849 experiment 0.530191188431671 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 39 PHF3 ENSG00000118482 UTR3 Human protein_coding chr6:64423664 chr6:64423682 . . 0 hm6A_associated_SNPs_8805 0 0 1 5 64423673 64423698 mRNA hsa-miR-1271 PHF3 miRanda miRanda
14034 chr6 71571383 71571383 1 - C T rs150481412 71571388 - 71571368 71571408 41 CGAGCCAAAGTACCACCTGGACACAGTGAAAATTGAGGTAT CGAGCCAAAGTACCACCTGGACACAATGAAAATTGAGGTAT < 41bp 1 0.7278142053795 1 0.978639245033264 experiment 0.544371589241 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 B3GAT2 ENSG00000112309 CDS Human protein_coding chr6:71571388 chr6:71571383 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_8808 0 0 0 4 71571379 71571399 mRNA hsa-miR-27a B3GAT2 miRanda miRanda
14034 chr6 71571383 71571383 1 - C T rs150481412 71571388 - 71571368 71571408 41 CGAGCCAAAGTACCACCTGGACACAGTGAAAATTGAGGTAT CGAGCCAAAGTACCACCTGGACACAATGAAAATTGAGGTAT < 41bp 1 0.7278142053795 1 0.978639245033264 experiment 0.544371589241 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 B3GAT2 ENSG00000112309 CDS Human protein_coding chr6:71571388 chr6:71571383 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_8808 0 0 0 4 71571379 71571399 mRNA hsa-miR-27b B3GAT2 miRanda miRanda
14034 chr6 71571383 71571383 1 - C T rs150481412 71571388 - 71571368 71571408 41 CGAGCCAAAGTACCACCTGGACACAGTGAAAATTGAGGTAT CGAGCCAAAGTACCACCTGGACACAATGAAAATTGAGGTAT < 41bp 1 0.7278142053795 1 0.978639245033264 experiment 0.544371589241 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 B3GAT2 ENSG00000112309 CDS Human protein_coding chr6:71571388 chr6:71571383 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_8808 0 0 0 4 71571382 71571402 mRNA hsa-miR-599 B3GAT2 miRanda miRanda
14034 chr6 71571383 71571383 1 - C T rs150481412 71571388 - 71571368 71571408 41 CGAGCCAAAGTACCACCTGGACACAGTGAAAATTGAGGTAT CGAGCCAAAGTACCACCTGGACACAATGAAAATTGAGGTAT < 41bp 1 0.7278142053795 1 0.978639245033264 experiment 0.544371589241 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 B3GAT2 ENSG00000112309 CDS Human protein_coding chr6:71571388 chr6:71571383 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_8808 0 0 0 4 71571368 71571388 mRNA hsa-miR-875-5p B3GAT2 miRanda miRanda
14034 chr6 80752141 80752141 1 + A T rs187471998 80752151 + 80752131 80752171 41 GCTCTTGTGTAATCTACTTGACATCATTTTACTCTTGGAAT GCTCTTGTGTTATCTACTTGACATCATTTTACTCTTGGAAT < 41bp 1 0.652225394177195 1 0.756298899650574 experiment 0.69554921164561 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 TTK ENSG00000112742 UTR3 Human protein_coding chr6:80752151 chr6:80752141 . . 0 hm6A_associated_SNPs_8829 0 0 1 3 80752129 80752152 mRNA hsa-miR-26a TTK miRanda miRanda
14034 chr6 80752141 80752141 1 + A T rs187471998 80752151 + 80752131 80752171 41 GCTCTTGTGTAATCTACTTGACATCATTTTACTCTTGGAAT GCTCTTGTGTTATCTACTTGACATCATTTTACTCTTGGAAT < 41bp 1 0.652225394177195 1 0.756298899650574 experiment 0.69554921164561 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 TTK ENSG00000112742 UTR3 Human protein_coding chr6:80752151 chr6:80752141 . . 0 hm6A_associated_SNPs_8829 0 0 1 3 80752130 80752152 mRNA hsa-miR-26b TTK miRanda miRanda
14034 chr6 80752141 80752141 1 + A T rs187471998 80752151 + 80752131 80752171 41 GCTCTTGTGTAATCTACTTGACATCATTTTACTCTTGGAAT GCTCTTGTGTTATCTACTTGACATCATTTTACTCTTGGAAT < 41bp 1 0.652225394177195 1 0.756298899650574 experiment 0.69554921164561 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 TTK ENSG00000112742 UTR3 Human protein_coding chr6:80752151 chr6:80752141 . . 0 hm6A_associated_SNPs_8829 0 0 1 3 80752134 80752152 mRNA hsa-miR-1297 TTK miRanda miRanda
14034 chr6 83076532 83076532 1 + T C rs190345045 83076522 + 83076502 83076542 41 GCAACTTCATAACTTCTTTGACAAAGTAAATTACTTTTTTG GCAACTTCATAACTTCTTTGACAAAGTAAACTACTTTTTTG < 41bp 1 0.62448725237422 1 0.912067890167236 experiment 0.751025495251559 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 TPBG ENSG00000146242 UTR3 Human protein_coding chr6:83076522 chr6:83076532 . . 0 hm6A_associated_SNPs_8834 0 0 1 2 83076527 83076551 mRNA hsa-miR-217 TPBG miRanda miRanda
14034 chr6 83076532 83076532 1 + T C rs190345045 83076522 + 83076502 83076542 41 GCAACTTCATAACTTCTTTGACAAAGTAAATTACTTTTTTG GCAACTTCATAACTTCTTTGACAAAGTAAACTACTTTTTTG < 41bp 1 0.62448725237422 1 0.912067890167236 experiment 0.751025495251559 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 TPBG ENSG00000146242 UTR3 Human protein_coding chr6:83076522 chr6:83076532 . . 0 hm6A_associated_SNPs_8834 0 0 1 2 83076518 83076539 mRNA hsa-miR-186 TPBG miRanda miRanda
14034 chr6 83846965 83846965 1 + T C rs191811764 83846961 + 83846941 83846981 41 TACCATGGATGAAATAGAGAACTTTAGTCTCACTGTGAATC TACCATGGATGAAATAGAGAACTTCAGTCTCACTGTGAATC < 41bp 1 0.634555191138213 1 0.853923738002777 experiment 0.730889617723574 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 25 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846961 chr6:83846965 synonymous SNV . 0 hm6A_associated_SNPs_8837 0 0 1 3 83846956 83846979 mRNA hsa-miR-27a DOPEY1 miRanda miRanda
14034 chr6 83846965 83846965 1 + T C rs191811764 83846961 + 83846941 83846981 41 TACCATGGATGAAATAGAGAACTTTAGTCTCACTGTGAATC TACCATGGATGAAATAGAGAACTTCAGTCTCACTGTGAATC < 41bp 1 0.634555191138213 1 0.853923738002777 experiment 0.730889617723574 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 25 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846961 chr6:83846965 synonymous SNV . 0 hm6A_associated_SNPs_8837 0 0 1 3 83846956 83846979 mRNA hsa-miR-27b DOPEY1 miRanda miRanda
14034 chr6 83846965 83846965 1 + T C rs191811764 83846961 + 83846941 83846981 41 TACCATGGATGAAATAGAGAACTTTAGTCTCACTGTGAATC TACCATGGATGAAATAGAGAACTTCAGTCTCACTGTGAATC < 41bp 1 0.634555191138213 1 0.853923738002777 experiment 0.730889617723574 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 25 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846961 chr6:83846965 synonymous SNV . 0 hm6A_associated_SNPs_8837 0 0 1 3 83846954 83846978 mRNA hsa-miR-128 DOPEY1 miRanda miRanda
14034 chr6 83848558 83848558 1 + T A rs560426467 83848553 + 83848533 83848573 41 TTCTAGAACACAGAGTAATGACTATTCCTGAAGAGAATGAA TTCTAGAACACAGAGTAATGACTATACCTGAAGAGAATGAA < 41bp 1 0.587136447312309 1 0.853575944900513 experiment 0.825727105375382 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83848553 chr6:83848558 synonymous SNV . 0 hm6A_associated_SNPs_8838 0 0 1 1 83848541 83848561 mRNA hsa-miR-613 DOPEY1 miRanda miRanda
14034 chr6 84670033 84670033 1 + G A rs142706355 84670048 + 84670028 84670068 41 TCCTTGTTATTAATGTTAAAACATAGAATGTTATAACTTAT TCCTTATTATTAATGTTAAAACATAGAATGTTATAACTTAT < 41bp 1 0.449066463000403 1 0.0175466537475586 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 CYB5R4 ENSG00000065615 UTR3 Human protein_coding chr6:84670048 chr6:84670033 . . 0 hm6A_associated_SNPs_8841 0 0 1 3 84670016 84670038 mRNA hsa-miR-381 CYB5R4 miRanda miRanda
14034 chr6 84670033 84670033 1 + G A rs142706355 84670048 + 84670028 84670068 41 TCCTTGTTATTAATGTTAAAACATAGAATGTTATAACTTAT TCCTTATTATTAATGTTAAAACATAGAATGTTATAACTTAT < 41bp 1 0.449066463000403 1 0.0175466537475586 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 CYB5R4 ENSG00000065615 UTR3 Human protein_coding chr6:84670048 chr6:84670033 . . 0 hm6A_associated_SNPs_8841 0 0 1 3 84670016 84670038 mRNA hsa-miR-300 CYB5R4 miRanda miRanda
14034 chr6 84670033 84670033 1 + G A rs142706355 84670048 + 84670028 84670068 41 TCCTTGTTATTAATGTTAAAACATAGAATGTTATAACTTAT TCCTTATTATTAATGTTAAAACATAGAATGTTATAACTTAT < 41bp 1 0.449066463000403 1 0.0175466537475586 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 CYB5R4 ENSG00000065615 UTR3 Human protein_coding chr6:84670048 chr6:84670033 . . 0 hm6A_associated_SNPs_8841 0 0 1 3 84670024 84670045 mRNA hsa-miR-543 CYB5R4 miRanda miRanda
14034 chr6 87971814 87971814 1 + T C rs75431582 87971794 + 87971774 87971814 41 TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGT TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGC < 41bp 1 0.438139739540595 1 0.756778120994568 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 ZNF292 ENSG00000188994 UTR3 Human protein_coding chr6:87971794 chr6:87971814 . . 0 hm6A_associated_SNPs_8857 0 0 1 4 87971801 87971824 mRNA hsa-miR-30c ZNF292 miRanda miRanda
14034 chr6 87971814 87971814 1 + T C rs75431582 87971794 + 87971774 87971814 41 TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGT TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGC < 41bp 1 0.438139739540595 1 0.756778120994568 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 ZNF292 ENSG00000188994 UTR3 Human protein_coding chr6:87971794 chr6:87971814 . . 0 hm6A_associated_SNPs_8857 0 0 1 4 87971800 87971824 mRNA hsa-miR-30b ZNF292 miRanda miRanda
14034 chr6 87971814 87971814 1 + T C rs75431582 87971794 + 87971774 87971814 41 TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGT TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGC < 41bp 1 0.438139739540595 1 0.756778120994568 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 ZNF292 ENSG00000188994 UTR3 Human protein_coding chr6:87971794 chr6:87971814 . . 0 hm6A_associated_SNPs_8857 0 0 1 4 87971810 87971832 mRNA hsa-miR-134 ZNF292 miRanda miRanda
14034 chr6 87971814 87971814 1 + T C rs75431582 87971794 + 87971774 87971814 41 TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGT TTGCCCTTTTCATGAACTAAACAATTATCTGTGTGATTGGC < 41bp 1 0.438139739540595 1 0.756778120994568 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 41 ZNF292 ENSG00000188994 UTR3 Human protein_coding chr6:87971794 chr6:87971814 . . 0 hm6A_associated_SNPs_8857 0 0 1 4 87971801 87971822 mRNA hsa-miR-494 ZNF292 miRanda miRanda
14034 chr6 88221263 88221263 1 + C A rs148607040 88221262 + 88221242 88221282 41 TGATTTTAGCCTCACGTGAGACTCCTTTTAAGACTAAACCA TGATTTTAGCCTCACGTGAGAATCCTTTTAAGACTAAACCA Direct Loss 1 0.756826746668684 1 0.677187621593475 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 SLC35A1 ENSG00000164414 UTR3 Human protein_coding chr6:88221262 chr6:88221263 . . 0 hm6A_associated_SNPs_8859 0 0 1 2 88221245 88221268 mRNA hsa-miR-28-5p SLC35A1 miRanda miRanda
14034 chr6 88221263 88221263 1 + C A rs148607040 88221262 + 88221242 88221282 41 TGATTTTAGCCTCACGTGAGACTCCTTTTAAGACTAAACCA TGATTTTAGCCTCACGTGAGAATCCTTTTAAGACTAAACCA Direct Loss 1 0.756826746668684 1 0.677187621593475 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 SLC35A1 ENSG00000164414 UTR3 Human protein_coding chr6:88221262 chr6:88221263 . . 0 hm6A_associated_SNPs_8859 0 0 1 2 88221243 88221268 mRNA hsa-miR-28-5p SLC35A1 miRanda miRanda
14034 chr6 88221263 88221263 1 + C A rs148607040 88221279 + 88221259 88221299 41 GAGACTCCTTTTAAGACTAAACCATTTGCATTAAACTAGAG GAGAATCCTTTTAAGACTAAACCATTTGCATTAAACTAGAG < 41bp 1 0.447975440842511 1 0.693056464195251 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 5 SLC35A1 ENSG00000164414 UTR3 Human protein_coding chr6:88221279 chr6:88221263 . . 0 hm6A_associated_SNPs_8860 0 0 1 2 88221245 88221268 mRNA hsa-miR-28-5p SLC35A1 miRanda miRanda
14034 chr6 88221263 88221263 1 + C A rs148607040 88221279 + 88221259 88221299 41 GAGACTCCTTTTAAGACTAAACCATTTGCATTAAACTAGAG GAGAATCCTTTTAAGACTAAACCATTTGCATTAAACTAGAG < 41bp 1 0.447975440842511 1 0.693056464195251 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 5 SLC35A1 ENSG00000164414 UTR3 Human protein_coding chr6:88221279 chr6:88221263 . . 0 hm6A_associated_SNPs_8860 0 0 1 2 88221243 88221268 mRNA hsa-miR-28-5p SLC35A1 miRanda miRanda
14034 chr6 88321953 88321953 1 + C T rs2307381 88321949 + 88321929 88321969 41 TGTCTTGTAAGGAGCACCTGACTACGGTACTCGATAAGGTA TGTCTTGTAAGGAGCACCTGACTATGGTACTCGATAAGGTA < 41bp 1 0.293411775039723 1 0.346620470285416 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88321949 chr6:88321953 nonsynonymous SNV 0.925 3 hm6A_associated_SNPs_8864 0 0 1 2 88321946 88321966 mRNA hsa-miR-21 ORC3L miRanda miRanda
14034 chr6 88321953 88321953 1 + C T rs2307381 88321949 + 88321929 88321969 41 TGTCTTGTAAGGAGCACCTGACTACGGTACTCGATAAGGTA TGTCTTGTAAGGAGCACCTGACTATGGTACTCGATAAGGTA < 41bp 1 0.293411775039723 1 0.346620470285416 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88321949 chr6:88321953 nonsynonymous SNV 0.925 3 hm6A_associated_SNPs_8864 0 0 1 2 88321948 88321966 mRNA hsa-miR-590-5p ORC3L miRanda miRanda
14034 chr6 88376881 88376881 1 + A T rs371602431 88376895 + 88376875 88376915 41 TAGCTTAAGAGAAAAAGGTGACCAGTCATATTTACATATAT TAGCTTTAGAGAAAAAGGTGACCAGTCATATTTACATATAT < 41bp 1 0.365565282938788 1 0.00232309103012085 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ORC3 ENSG00000135336 UTR3 Human protein_coding chr6:88376895 chr6:88376881 . . 0 hm6A_associated_SNPs_8865 0 0 1 1 88376875 88376896 mRNA hsa-miR-204 ORC3L miRanda miRanda
14034 chr6 88377143 88377143 1 + A G rs74984361 88377123 + 88377103 88377143 41 TGTGAGTAAATCATTCTTGAACTTAGAGTATGTAAATGTAA TGTGAGTAAATCATTCTTGAACTTAGAGTATGTAAATGTAG < 41bp 1 0.248187387475276 1 0.000852108001708984 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 ORC3 ENSG00000135336 UTR3 Human protein_coding chr6:88377123 chr6:88377143 . . 0 hm6A_associated_SNPs_8866 0 0 1 1 88377133 88377155 mRNA hsa-miR-191 ORC3L miRanda miRanda
14034 chr6 89794329 89794329 1 + C G rs111668407 89794315 + 89794295 89794335 41 AGGTGAAGATCTAAATGTGAACAGTTTACTAATGCACTACT AGGTGAAGATCTAAATGTGAACAGTTTACTAATGGACTACT < 41bp 1 0.343351931529272 1 0.957875847816467 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 35 PNRC1 ENSG00000146278 UTR3 Human protein_coding chr6:89794315 chr6:89794329 . . 0 hm6A_associated_SNPs_8870 0 0 0 6 89794312 89794333 mRNA hsa-miR-130a PNRC1 miRanda miRanda
14034 chr6 89794329 89794329 1 + C G rs111668407 89794315 + 89794295 89794335 41 AGGTGAAGATCTAAATGTGAACAGTTTACTAATGCACTACT AGGTGAAGATCTAAATGTGAACAGTTTACTAATGGACTACT < 41bp 1 0.343351931529272 1 0.957875847816467 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 35 PNRC1 ENSG00000146278 UTR3 Human protein_coding chr6:89794315 chr6:89794329 . . 0 hm6A_associated_SNPs_8870 0 0 0 6 89794312 89794335 mRNA hsa-miR-142-3p PNRC1 miRanda miRanda
14034 chr6 89794329 89794329 1 + C G rs111668407 89794315 + 89794295 89794335 41 AGGTGAAGATCTAAATGTGAACAGTTTACTAATGCACTACT AGGTGAAGATCTAAATGTGAACAGTTTACTAATGGACTACT < 41bp 1 0.343351931529272 1 0.957875847816467 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 35 PNRC1 ENSG00000146278 UTR3 Human protein_coding chr6:89794315 chr6:89794329 . . 0 hm6A_associated_SNPs_8870 0 0 0 6 89794308 89794333 mRNA hsa-miR-301a PNRC1 miRanda miRanda
14034 chr6 89794329 89794329 1 + C G rs111668407 89794315 + 89794295 89794335 41 AGGTGAAGATCTAAATGTGAACAGTTTACTAATGCACTACT AGGTGAAGATCTAAATGTGAACAGTTTACTAATGGACTACT < 41bp 1 0.343351931529272 1 0.957875847816467 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 35 PNRC1 ENSG00000146278 UTR3 Human protein_coding chr6:89794315 chr6:89794329 . . 0 hm6A_associated_SNPs_8870 0 0 0 6 89794312 89794333 mRNA hsa-miR-130b PNRC1 miRanda miRanda
14034 chr6 89794329 89794329 1 + C G rs111668407 89794315 + 89794295 89794335 41 AGGTGAAGATCTAAATGTGAACAGTTTACTAATGCACTACT AGGTGAAGATCTAAATGTGAACAGTTTACTAATGGACTACT < 41bp 1 0.343351931529272 1 0.957875847816467 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 35 PNRC1 ENSG00000146278 UTR3 Human protein_coding chr6:89794315 chr6:89794329 . . 0 hm6A_associated_SNPs_8870 0 0 0 6 89794311 89794333 mRNA hsa-miR-454 PNRC1 miRanda miRanda
14034 chr6 89794329 89794329 1 + C G rs111668407 89794315 + 89794295 89794335 41 AGGTGAAGATCTAAATGTGAACAGTTTACTAATGCACTACT AGGTGAAGATCTAAATGTGAACAGTTTACTAATGGACTACT < 41bp 1 0.343351931529272 1 0.957875847816467 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 35 PNRC1 ENSG00000146278 UTR3 Human protein_coding chr6:89794315 chr6:89794329 . . 0 hm6A_associated_SNPs_8870 0 0 0 6 89794308 89794333 mRNA hsa-miR-301b PNRC1 miRanda miRanda
14034 chr6 89794396 89794396 1 + G C rs12445 89794414 + 89794394 89794434 41 TTGTAATCTGAAATTACTGAACAACTCCTATTCCCATTTTT TTCTAATCTGAAATTACTGAACAACTCCTATTCCCATTTTT < 41bp 1 0.554838542605155 1 0.110309809446335 experiment 0.890322914789691 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 PNRC1 ENSG00000146278 UTR3 Human protein_coding chr6:89794414 chr6:89794396 . . 0 hm6A_associated_SNPs_8871 0 0 1 1 89794396 89794421 mRNA hsa-miR-382 PNRC1 miRanda miRanda
14034 chr6 90583554 90583554 1 + C T rs376095529 90583546 + 90583526 90583566 41 TAAGTTGCTGAATTCCTGGGACTCTTAACTGATATTGCATA TAAGTTGCTGAATTCCTGGGACTCTTAATTGATATTGCATA < 41bp 1 0.562546492886974 1 0.705009937286377 experiment 0.874907014226051 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90583546 chr6:90583554 . . 0 hm6A_associated_SNPs_8890 0 0 1 2 90583538 90583559 mRNA hsa-miR-223 CASP8AP2 miRanda miRanda
14034 chr6 90583554 90583554 1 + C T rs376095529 90583546 + 90583526 90583566 41 TAAGTTGCTGAATTCCTGGGACTCTTAACTGATATTGCATA TAAGTTGCTGAATTCCTGGGACTCTTAATTGATATTGCATA < 41bp 1 0.562546492886974 1 0.705009937286377 experiment 0.874907014226051 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90583546 chr6:90583554 . . 0 hm6A_associated_SNPs_8890 0 0 1 2 90583541 90583565 mRNA hsa-miR-448 CASP8AP2 miRanda miRanda
14034 chr6 90583554 90583554 1 + C T rs376095529 90583553 + 90583533 90583573 41 CTGAATTCCTGGGACTCTTAACTGATATTGCATACTACACA CTGAATTCCTGGGACTCTTAATTGATATTGCATACTACACA Direct Loss 1 0.319773000991898 1 0.108908772468567 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90583553 chr6:90583554 . . 0 hm6A_associated_SNPs_8891 0 0 1 2 90583538 90583559 mRNA hsa-miR-223 CASP8AP2 miRanda miRanda
14034 chr6 90583554 90583554 1 + C T rs376095529 90583553 + 90583533 90583573 41 CTGAATTCCTGGGACTCTTAACTGATATTGCATACTACACA CTGAATTCCTGGGACTCTTAATTGATATTGCATACTACACA Direct Loss 1 0.319773000991898 1 0.108908772468567 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90583553 chr6:90583554 . . 0 hm6A_associated_SNPs_8891 0 0 1 2 90583541 90583565 mRNA hsa-miR-448 CASP8AP2 miRanda miRanda
14034 chr6 96999785 96999785 1 + C A rs550508541 96999784 + 96999764 96999804 41 TATTATGGTGAAAAGGGGAGACAAAAAAAGGGAAAGGTAAC TATTATGGTGAAAAGGGGAGAAAAAAAAAGGGAAAGGTAAC Direct Loss 1 0.75027850468441 1 0.157798081636429 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 UFL1 ENSG00000014123 CDS Human protein_coding chr6:96999784 chr6:96999785 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_8896 0 0 1 1 96999776 96999797 mRNA hsa-miR-211 KIAA0776 miRanda miRanda
14034 chr6 105527373 105527373 1 + T C rs77130250 105527369 + 105527349 105527389 41 ATAACATAACTCCAGAAAAGACAATGAATGTGTAATTTGGG ATAACATAACTCCAGAAAAGACAACGAATGTGTAATTTGGG < 41bp 1 0.504730714631706 1 0.458851754665375 experiment 0.990538570736588 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 LIN28B ENSG00000187772 UTR3 Human protein_coding chr6:105527369 chr6:105527373 . . 0 hm6A_associated_SNPs_8906 0 0 1 4 105527357 105527380 mRNA hsa-miR-181a LIN28B miRanda miRanda
14034 chr6 105527373 105527373 1 + T C rs77130250 105527369 + 105527349 105527389 41 ATAACATAACTCCAGAAAAGACAATGAATGTGTAATTTGGG ATAACATAACTCCAGAAAAGACAACGAATGTGTAATTTGGG < 41bp 1 0.504730714631706 1 0.458851754665375 experiment 0.990538570736588 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 LIN28B ENSG00000187772 UTR3 Human protein_coding chr6:105527369 chr6:105527373 . . 0 hm6A_associated_SNPs_8906 0 0 1 4 105527358 105527380 mRNA hsa-miR-181b LIN28B miRanda miRanda
14034 chr6 105527373 105527373 1 + T C rs77130250 105527369 + 105527349 105527389 41 ATAACATAACTCCAGAAAAGACAATGAATGTGTAATTTGGG ATAACATAACTCCAGAAAAGACAACGAATGTGTAATTTGGG < 41bp 1 0.504730714631706 1 0.458851754665375 experiment 0.990538570736588 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 LIN28B ENSG00000187772 UTR3 Human protein_coding chr6:105527369 chr6:105527373 . . 0 hm6A_associated_SNPs_8906 0 0 1 4 105527361 105527380 mRNA hsa-miR-181c LIN28B miRanda miRanda
14034 chr6 105527373 105527373 1 + T C rs77130250 105527369 + 105527349 105527389 41 ATAACATAACTCCAGAAAAGACAATGAATGTGTAATTTGGG ATAACATAACTCCAGAAAAGACAACGAATGTGTAATTTGGG < 41bp 1 0.504730714631706 1 0.458851754665375 experiment 0.990538570736588 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 LIN28B ENSG00000187772 UTR3 Human protein_coding chr6:105527369 chr6:105527373 . . 0 hm6A_associated_SNPs_8906 0 0 1 4 105527358 105527380 mRNA hsa-miR-181d LIN28B miRanda miRanda
14034 chr6 110552314 110552314 1 + A C rs182984077 110552326 + 110552306 110552346 41 TATGTCTGAAAAAAAAAATGACACTCCTGGAAGATGGCTAG TATGTCTGCAAAAAAAAATGACACTCCTGGAAGATGGCTAG < 41bp 1 0.334860330693301 1 0.0287629365921021 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 CDC40 ENSG00000168438 UTR3 Human protein_coding chr6:110552326 chr6:110552314 . . 0 hm6A_associated_SNPs_8929 0 0 0 1 110552314 110552333 mRNA hsa-miR-122 CDC40 miRanda miRanda
14034 chr6 111215245 111215245 1 + T C rs2298886 111215231 + 111215211 111215251 41 CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAATTGCTGC CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAACTGCTGC < 41bp 1 0.75716511721323 1 0.843281984329224 experiment 0.48566976557354 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 35 AMD1 ENSG00000123505 UTR3 Human protein_coding chr6:111215231 chr6:111215245 . . 0 hm6A_associated_SNPs_8930 0 0 1 6 111215231 111215253 mRNA hsa-miR-15a AMD1 miRanda miRanda
14034 chr6 111215245 111215245 1 + T C rs2298886 111215231 + 111215211 111215251 41 CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAATTGCTGC CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAACTGCTGC < 41bp 1 0.75716511721323 1 0.843281984329224 experiment 0.48566976557354 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 35 AMD1 ENSG00000123505 UTR3 Human protein_coding chr6:111215231 chr6:111215245 . . 0 hm6A_associated_SNPs_8930 0 0 1 6 111215232 111215253 mRNA hsa-miR-16 AMD1 miRanda miRanda
14034 chr6 111215245 111215245 1 + T C rs2298886 111215231 + 111215211 111215251 41 CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAATTGCTGC CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAACTGCTGC < 41bp 1 0.75716511721323 1 0.843281984329224 experiment 0.48566976557354 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 35 AMD1 ENSG00000123505 UTR3 Human protein_coding chr6:111215231 chr6:111215245 . . 0 hm6A_associated_SNPs_8930 0 0 1 6 111215231 111215253 mRNA hsa-miR-15b AMD1 miRanda miRanda
14034 chr6 111215245 111215245 1 + T C rs2298886 111215231 + 111215211 111215251 41 CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAATTGCTGC CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAACTGCTGC < 41bp 1 0.75716511721323 1 0.843281984329224 experiment 0.48566976557354 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 35 AMD1 ENSG00000123505 UTR3 Human protein_coding chr6:111215231 chr6:111215245 . . 0 hm6A_associated_SNPs_8930 0 0 1 6 111215233 111215253 mRNA hsa-miR-195 AMD1 miRanda miRanda
14034 chr6 111215245 111215245 1 + T C rs2298886 111215231 + 111215211 111215251 41 CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAATTGCTGC CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAACTGCTGC < 41bp 1 0.75716511721323 1 0.843281984329224 experiment 0.48566976557354 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 35 AMD1 ENSG00000123505 UTR3 Human protein_coding chr6:111215231 chr6:111215245 . . 0 hm6A_associated_SNPs_8930 0 0 1 6 111215232 111215253 mRNA hsa-miR-424 AMD1 miRanda miRanda
14034 chr6 111215245 111215245 1 + T C rs2298886 111215231 + 111215211 111215251 41 CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAATTGCTGC CCTCAGCCTAACCCTCTAGGACTGTTCTATTAAACTGCTGC < 41bp 1 0.75716511721323 1 0.843281984329224 experiment 0.48566976557354 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 35 AMD1 ENSG00000123505 UTR3 Human protein_coding chr6:111215231 chr6:111215245 . . 0 hm6A_associated_SNPs_8930 0 0 1 6 111215235 111215253 mRNA hsa-miR-497 AMD1 miRanda miRanda
14034 chr6 111289056 111289056 1 + A C rs538155247 111289038 + 111289018 111289058 41 CTCATAATAACTTGTCAAGAACTTTTTAGAGTTGTTACATA CTCATAATAACTTGTCAAGAACTTTTTAGAGTTGTTACCTA < 41bp 1 0.281563121055597 1 0.915679216384888 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 GTF3C6 ENSG00000155115 UTR3 Human protein_coding chr6:111289038 chr6:111289056 . . 0 hm6A_associated_SNPs_8933 0 0 1 1 111289035 111289056 mRNA hsa-miR-194 GTF3C6 miRanda miRanda
14034 chr6 112422027 112422027 1 + A G rs183512768 112422018 + 112421998 112422038 41 AAGTCTTTTGTCAAGGTCTGACTAGGTCAAGGGTAATGGAC AAGTCTTTTGTCAAGGTCTGACTAGGTCAGGGGTAATGGAC < 41bp 1 0.791331232921489 1 0.185421794652939 experiment 0.417337534157023 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 FAM229B ENSG00000203778 UTR3 Human protein_coding chr6:112422018 chr6:112422027 . . 0 hm6A_associated_SNPs_8937 0 0 1 2 112422003 112422027 mRNA hsa-miR-192 C6orf225 miRanda miRanda
14034 chr6 112422027 112422027 1 + A G rs183512768 112422018 + 112421998 112422038 41 AAGTCTTTTGTCAAGGTCTGACTAGGTCAAGGGTAATGGAC AAGTCTTTTGTCAAGGTCTGACTAGGTCAGGGGTAATGGAC < 41bp 1 0.791331232921489 1 0.185421794652939 experiment 0.417337534157023 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 FAM229B ENSG00000203778 UTR3 Human protein_coding chr6:112422018 chr6:112422027 . . 0 hm6A_associated_SNPs_8937 0 0 1 2 112422003 112422027 mRNA hsa-miR-215 C6orf225 miRanda miRanda
14034 chr6 116565676 116565676 1 + C T rs564013734 116565675 + 116565655 116565695 41 TTTGAGACCCACTGGCTAGAACATATCCTCCAGAGACTTGG TTTGAGACCCACTGGCTAGAATATATCCTCCAGAGACTTGG Direct Loss 1 0.485732470968806 1 0.0989119112491608 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 NT5DC1 ENSG00000236326 ncRNA_exonic Human antisense chr6:116565675 chr6:116565676 . . 0 hm6A_associated_SNPs_8945 0 0 0 2 116565661 116565682 mRNA hsa-miR-190 NT5DC1 miRanda miRanda
14034 chr6 116565676 116565676 1 + C T rs564013734 116565675 + 116565655 116565695 41 TTTGAGACCCACTGGCTAGAACATATCCTCCAGAGACTTGG TTTGAGACCCACTGGCTAGAATATATCCTCCAGAGACTTGG Direct Loss 1 0.485732470968806 1 0.0989119112491608 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 NT5DC1 ENSG00000236326 ncRNA_exonic Human antisense chr6:116565675 chr6:116565676 . . 0 hm6A_associated_SNPs_8945 0 0 0 2 116565660 116565682 mRNA hsa-miR-190b NT5DC1 miRanda miRanda
14034 chr6 117869594 117869594 1 + C T rs210622 117869603 + 117869583 117869623 41 CCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTG CCATGACTGCCTTTTTGTGAACACAATGTGAAAGAAGCCTG < 41bp 1 0.773601571948446 1 0.999028563499451 experiment 0.452796856103107 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869603 chr6:117869594 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_8950 0 0 1 2 117869594 117869614 mRNA hsa-miR-23a DCBLD1 miRanda miRanda
14034 chr6 117869594 117869594 1 + C T rs210622 117869603 + 117869583 117869623 41 CCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTG CCATGACTGCCTTTTTGTGAACACAATGTGAAAGAAGCCTG < 41bp 1 0.773601571948446 1 0.999028563499451 experiment 0.452796856103107 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869603 chr6:117869594 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_8950 0 0 1 2 117869594 117869614 mRNA hsa-miR-23b DCBLD1 miRanda miRanda
14034 chr6 118030453 118030453 1 + T C rs572493455 118030470 + 118030450 118030490 41 CTTTAAATTGTTTCTTGTTGACACTCCCCACAATGGAAAAA CTTCAAATTGTTTCTTGTTGACACTCCCCACAATGGAAAAA < 41bp 1 0.280930888549817 1 0.838228523731232 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 NUS1 ENSG00000153989 UTR3 Human protein_coding chr6:118030470 chr6:118030453 . . 0 hm6A_associated_SNPs_8953 0 0 0 1 118030451 118030472 mRNA hsa-miR-505 NUS1 miRanda miRanda
14034 chr6 118031524 118031524 1 + C T rs17079421 118031530 + 118031510 118031550 41 TTTGAAATAAAACCCAGGAAACAAGATTAATGTGAGCAGTT TTTGAAATAAAACCTAGGAAACAAGATTAATGTGAGCAGTT < 41bp 1 0.15666093495781 1 0.0957596600055695 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 NUS1 ENSG00000153989 UTR3 Human protein_coding chr6:118031530 chr6:118031524 . . 0 hm6A_associated_SNPs_8954 0 0 1 2 118031518 118031547 mRNA hsa-miR-221 NUS1 miRanda miRanda
14034 chr6 118031524 118031524 1 + C T rs17079421 118031530 + 118031510 118031550 41 TTTGAAATAAAACCCAGGAAACAAGATTAATGTGAGCAGTT TTTGAAATAAAACCTAGGAAACAAGATTAATGTGAGCAGTT < 41bp 1 0.15666093495781 1 0.0957596600055695 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 NUS1 ENSG00000153989 UTR3 Human protein_coding chr6:118031530 chr6:118031524 . . 0 hm6A_associated_SNPs_8954 0 0 1 2 118031523 118031546 mRNA hsa-miR-136 NUS1 miRanda miRanda
14034 chr6 119229073 119229073 1 + G T rs7765016 119229084 + 119229064 119229104 41 AAAGAAACAGGAATCATTAGACCAGGTTGTAAAGATGTCTT AAAGAAACATGAATCATTAGACCAGGTTGTAAAGATGTCTT < 41bp 1 0.155676095316657 1 0.483246177434921 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 10 ASF1A ENSG00000111875 UTR3 Human protein_coding chr6:119229084 chr6:119229073 . . 0 hm6A_associated_SNPs_8957 0 0 1 1 119229068 119229092 mRNA hsa-miR-490-3p ASF1A miRanda miRanda
14034 chr6 119229090 119229090 1 + T C rs552245656 119229084 + 119229064 119229104 41 AAAGAAACAGGAATCATTAGACCAGGTTGTAAAGATGTCTT AAAGAAACAGGAATCATTAGACCAGGCTGTAAAGATGTCTT < 41bp 1 0.17605147906555 1 0.482553392648697 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 27 ASF1A ENSG00000111875 UTR3 Human protein_coding chr6:119229084 chr6:119229090 . . 0 hm6A_associated_SNPs_8958 0 0 1 1 119229068 119229092 mRNA hsa-miR-490-3p ASF1A miRanda miRanda
14034 chr6 125404311 125404311 1 + A G rs79392876 125404315 + 125404295 125404335 41 AAAAATGGTCACTTTCATAAACTATAAACATCTATATCATA AAAAATGGTCACTTTCGTAAACTATAAACATCTATATCATA < 41bp 1 0.74729106318879 1 0.710704445838928 experiment 0.505417873622421 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 17 RNF217 ENSG00000146373 UTR3 Human protein_coding chr6:125404315 chr6:125404311 . . 0 hm6A_associated_SNPs_8964 0 0 1 2 125404308 125404330 mRNA hsa-miR-142-3p RNF217 miRanda miRanda
14034 chr6 125404311 125404311 1 + A G rs79392876 125404315 + 125404295 125404335 41 AAAAATGGTCACTTTCATAAACTATAAACATCTATATCATA AAAAATGGTCACTTTCGTAAACTATAAACATCTATATCATA < 41bp 1 0.74729106318879 1 0.710704445838928 experiment 0.505417873622421 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 17 RNF217 ENSG00000146373 UTR3 Human protein_coding chr6:125404315 chr6:125404311 . . 0 hm6A_associated_SNPs_8964 0 0 1 2 125404290 125404312 mRNA hsa-miR-488 RNF217 miRanda miRanda
14034 chr6 125404311 125404311 1 + A G rs79392876 125404322 + 125404302 125404342 41 GTCACTTTCATAAACTATAAACATCTATATCATAACTCTGA GTCACTTTCGTAAACTATAAACATCTATATCATAACTCTGA < 41bp 1 0.653929651432575 1 0.50041925907135 experiment 0.692140697134849 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 RNF217 ENSG00000146373 UTR3 Human protein_coding chr6:125404322 chr6:125404311 . . 0 hm6A_associated_SNPs_8965 0 0 1 2 125404308 125404330 mRNA hsa-miR-142-3p RNF217 miRanda miRanda
14034 chr6 125404311 125404311 1 + A G rs79392876 125404322 + 125404302 125404342 41 GTCACTTTCATAAACTATAAACATCTATATCATAACTCTGA GTCACTTTCGTAAACTATAAACATCTATATCATAACTCTGA < 41bp 1 0.653929651432575 1 0.50041925907135 experiment 0.692140697134849 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 RNF217 ENSG00000146373 UTR3 Human protein_coding chr6:125404322 chr6:125404311 . . 0 hm6A_associated_SNPs_8965 0 0 1 2 125404290 125404312 mRNA hsa-miR-488 RNF217 miRanda miRanda
14034 chr6 125584397 125584397 1 + A G rs146090355 125584409 + 125584389 125584429 41 TTCGATGTATATTTTTCCAAACATGTAGCTATTGTTTGCTT TTCGATGTGTATTTTTCCAAACATGTAGCTATTGTTTGCTT < 41bp 1 0.0871712428763008 1 0.755973696708679 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 TPD52L1 ENSG00000111907 UTR3 Human protein_coding chr6:125584409 chr6:125584397 . . 0 hm6A_associated_SNPs_8967 0 0 1 1 125584397 125584418 mRNA hsa-miR-221 TPD52L1 miRanda miRanda
14034 chr6 126252143 126252143 1 + A G rs533622181 126252150 + 126252130 126252170 41 TGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTCAGAAA TGCTGTGTTCTCTGTGTAAAACAGTATTGTCCATTCAGAAA < 41bp 1 0.436671909496789 1 0.00211524963378906 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 NCOA7 ENSG00000111912 UTR3 Human protein_coding chr6:126252150 chr6:126252143 . . 0 hm6A_associated_SNPs_8971 0 0 1 4 126252137 126252158 mRNA hsa-miR-200b NCOA7 miRanda miRanda
14034 chr6 126252143 126252143 1 + A G rs533622181 126252150 + 126252130 126252170 41 TGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTCAGAAA TGCTGTGTTCTCTGTGTAAAACAGTATTGTCCATTCAGAAA < 41bp 1 0.436671909496789 1 0.00211524963378906 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 NCOA7 ENSG00000111912 UTR3 Human protein_coding chr6:126252150 chr6:126252143 . . 0 hm6A_associated_SNPs_8971 0 0 1 4 126252136 126252158 mRNA hsa-miR-200c NCOA7 miRanda miRanda
14034 chr6 126252143 126252143 1 + A G rs533622181 126252150 + 126252130 126252170 41 TGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTCAGAAA TGCTGTGTTCTCTGTGTAAAACAGTATTGTCCATTCAGAAA < 41bp 1 0.436671909496789 1 0.00211524963378906 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 NCOA7 ENSG00000111912 UTR3 Human protein_coding chr6:126252150 chr6:126252143 . . 0 hm6A_associated_SNPs_8971 0 0 1 4 126252127 126252147 mRNA hsa-miR-376c NCOA7 miRanda miRanda
14034 chr6 126252143 126252143 1 + A G rs533622181 126252150 + 126252130 126252170 41 TGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTCAGAAA TGCTGTGTTCTCTGTGTAAAACAGTATTGTCCATTCAGAAA < 41bp 1 0.436671909496789 1 0.00211524963378906 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 NCOA7 ENSG00000111912 UTR3 Human protein_coding chr6:126252150 chr6:126252143 . . 0 hm6A_associated_SNPs_8971 0 0 1 4 126252137 126252158 mRNA hsa-miR-429 NCOA7 miRanda miRanda
14034 chr6 126299264 126299264 1 + A T rs9388464 126299250 + 126299230 126299270 41 AGAAAAATAGCTATTTCTTGACAGTTCTATAGTTATACACA AGAAAAATAGCTATTTCTTGACAGTTCTATAGTTTTACACA < 41bp 1 0.178244382215138 1 0.0488860309123993 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 HINT3 ENSG00000111911 UTR3 Human protein_coding chr6:126299250 chr6:126299264 . . 0 hm6A_associated_SNPs_8973 0 0 1 2 126299244 126299267 mRNA hsa-miR-374a HINT3 miRanda miRanda
14034 chr6 126299264 126299264 1 + A T rs9388464 126299250 + 126299230 126299270 41 AGAAAAATAGCTATTTCTTGACAGTTCTATAGTTATACACA AGAAAAATAGCTATTTCTTGACAGTTCTATAGTTTTACACA < 41bp 1 0.178244382215138 1 0.0488860309123993 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 HINT3 ENSG00000111911 UTR3 Human protein_coding chr6:126299250 chr6:126299264 . . 0 hm6A_associated_SNPs_8973 0 0 1 2 126299244 126299267 mRNA hsa-miR-374b HINT3 miRanda miRanda
14034 chr6 126360288 126360288 1 + T C rs562804241 126360283 + 126360263 126360303 41 AAAGGGAATTAATATTGTTGACTTTTAAAACATCTGCTGGA AAAGGGAATTAATATTGTTGACTTTCAAAACATCTGCTGGA < 41bp 1 0.276773246241661 1 0.847155392169952 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 26 TRMT11 ENSG00000066651 UTR3 Human protein_coding chr6:126360283 chr6:126360288 . . 0 hm6A_associated_SNPs_8977 0 0 1 2 126360281 126360302 mRNA hsa-miR-214 TRMT11 miRanda miRanda
14034 chr6 126360288 126360288 1 + T C rs562804241 126360283 + 126360263 126360303 41 AAAGGGAATTAATATTGTTGACTTTTAAAACATCTGCTGGA AAAGGGAATTAATATTGTTGACTTTCAAAACATCTGCTGGA < 41bp 1 0.276773246241661 1 0.847155392169952 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 26 TRMT11 ENSG00000066651 UTR3 Human protein_coding chr6:126360283 chr6:126360288 . . 0 hm6A_associated_SNPs_8977 0 0 1 2 126360282 126360303 mRNA hsa-miR-338-3p TRMT11 miRanda miRanda
14034 chr6 126360288 126360288 1 + T C rs562804241 126360292 + 126360272 126360312 41 TAATATTGTTGACTTTTAAAACATCTGCTGGATATATTATA TAATATTGTTGACTTTCAAAACATCTGCTGGATATATTATA < 41bp 1 0.196466868902239 1 0.521853506565094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26121403;GSE63753;miCLIP;HEK293;Control 17 TRMT11 ENSG00000066651 UTR3 Human protein_coding chr6:126360292 chr6:126360288 . . 0 hm6A_associated_SNPs_8978 0 0 1 2 126360281 126360302 mRNA hsa-miR-214 TRMT11 miRanda miRanda
14034 chr6 126360288 126360288 1 + T C rs562804241 126360292 + 126360272 126360312 41 TAATATTGTTGACTTTTAAAACATCTGCTGGATATATTATA TAATATTGTTGACTTTCAAAACATCTGCTGGATATATTATA < 41bp 1 0.196466868902239 1 0.521853506565094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26121403;GSE63753;miCLIP;HEK293;Control 17 TRMT11 ENSG00000066651 UTR3 Human protein_coding chr6:126360292 chr6:126360288 . . 0 hm6A_associated_SNPs_8978 0 0 1 2 126360282 126360303 mRNA hsa-miR-338-3p TRMT11 miRanda miRanda
14034 chr6 130460904 130460904 1 + G A rs147270987 130460892 + 130460872 130460912 41 GAGAAGAATTCTCACAATGAACTTTGAAGATGGTGAATTCT GAGAAGAATTCTCACAATGAACTTTGAAGATGATGAATTCT < 41bp 1 0.79177583235467 1 0.979333639144897 experiment 0.41644833529066 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 L3MBTL3 ENSG00000227678 ncRNA_intronic Human antisense chr6:130460892 chr6:130460904 . . 0 hm6A_associated_SNPs_8980 0 0 1 1 130460899 130460918 mRNA hsa-miR-361-5p L3MBTL3 miRanda miRanda
14034 chr6 130460908 130460908 1 + A G rs140855410 130460892 + 130460872 130460912 41 GAGAAGAATTCTCACAATGAACTTTGAAGATGGTGAATTCT GAGAAGAATTCTCACAATGAACTTTGAAGATGGTGAGTTCT < 41bp 1 0.773254520122909 1 0.94514799118042 experiment 0.453490959754182 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 L3MBTL3 ENSG00000227678 ncRNA_intronic Human antisense chr6:130460892 chr6:130460908 . . 0 hm6A_associated_SNPs_8981 0 0 1 1 130460899 130460918 mRNA hsa-miR-361-5p L3MBTL3 miRanda miRanda
14034 chr6 130461018 130461018 1 + C T rs545314802 130460998 + 130460978 130461018 41 CTAAGTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTATC CTAAGTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTATT < 41bp 1 0.453566394580328 1 0.879811227321625 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 L3MBTL3 ENSG00000227678 ncRNA_intronic Human antisense chr6:130460998 chr6:130461018 . . 0 hm6A_associated_SNPs_8982 0 0 1 2 130461010 130461031 mRNA hsa-miR-340 L3MBTL3 miRanda miRanda
14034 chr6 130461018 130461018 1 + C T rs545314802 130460998 + 130460978 130461018 41 CTAAGTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTATC CTAAGTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTATT < 41bp 1 0.453566394580328 1 0.879811227321625 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 L3MBTL3 ENSG00000227678 ncRNA_intronic Human antisense chr6:130460998 chr6:130461018 . . 0 hm6A_associated_SNPs_8982 0 0 1 2 130461012 130461032 mRNA hsa-miR-410 L3MBTL3 miRanda miRanda
14034 chr6 133850350 133850350 1 + C G rs114941538 133850343 + 133850323 133850363 41 AGCCCTGAGGTTTGAATCTGACTTTAGCCTACCTAACCCAG AGCCCTGAGGTTTGAATCTGACTTTAGGCTACCTAACCCAG < 41bp 1 0.353043076714835 1 0.980783820152283 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850343 chr6:133850350 . . 0 hm6A_associated_SNPs_8987 0 0 1 2 133850346 133850366 mRNA hsa-miR-330-5p EYA4 miRanda miRanda
14034 chr6 133850350 133850350 1 + C G rs114941538 133850343 + 133850323 133850363 41 AGCCCTGAGGTTTGAATCTGACTTTAGCCTACCTAACCCAG AGCCCTGAGGTTTGAATCTGACTTTAGGCTACCTAACCCAG < 41bp 1 0.353043076714835 1 0.980783820152283 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850343 chr6:133850350 . . 0 hm6A_associated_SNPs_8987 0 0 1 2 133850347 133850366 mRNA hsa-miR-326 EYA4 miRanda miRanda
14034 chr6 133850350 133850350 1 + C G rs114941538 133850358 + 133850338 133850378 41 ATCTGACTTTAGCCTACCTAACCCAGAAAATCTGAATTGGA ATCTGACTTTAGGCTACCTAACCCAGAAAATCTGAATTGGA < 41bp 1 0.0874890976266518 1 0.982198715209961 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850358 chr6:133850350 . . 0 hm6A_associated_SNPs_8988 0 0 1 2 133850346 133850366 mRNA hsa-miR-330-5p EYA4 miRanda miRanda
14034 chr6 133850350 133850350 1 + C G rs114941538 133850358 + 133850338 133850378 41 ATCTGACTTTAGCCTACCTAACCCAGAAAATCTGAATTGGA ATCTGACTTTAGGCTACCTAACCCAGAAAATCTGAATTGGA < 41bp 1 0.0874890976266518 1 0.982198715209961 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850358 chr6:133850350 . . 0 hm6A_associated_SNPs_8988 0 0 1 2 133850347 133850366 mRNA hsa-miR-326 EYA4 miRanda miRanda
14034 chr6 133850689 133850689 1 + A G rs568665526 133850699 + 133850679 133850719 41 AACCTTTGTGATGATTCTTAACATGACCAAATTTAAAAGTC AACCTTTGTGGTGATTCTTAACATGACCAAATTTAAAAGTC < 41bp 1 0.129637048871612 1 0.118823915719986 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850699 chr6:133850689 . . 0 hm6A_associated_SNPs_8989 0 0 1 3 133850688 133850709 mRNA hsa-miR-133a EYA4 miRanda miRanda
14034 chr6 133850689 133850689 1 + A G rs568665526 133850699 + 133850679 133850719 41 AACCTTTGTGATGATTCTTAACATGACCAAATTTAAAAGTC AACCTTTGTGGTGATTCTTAACATGACCAAATTTAAAAGTC < 41bp 1 0.129637048871612 1 0.118823915719986 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850699 chr6:133850689 . . 0 hm6A_associated_SNPs_8989 0 0 1 3 133850671 133850693 mRNA hsa-miR-377 EYA4 miRanda miRanda
14034 chr6 133850689 133850689 1 + A G rs568665526 133850699 + 133850679 133850719 41 AACCTTTGTGATGATTCTTAACATGACCAAATTTAAAAGTC AACCTTTGTGGTGATTCTTAACATGACCAAATTTAAAAGTC < 41bp 1 0.129637048871612 1 0.118823915719986 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850699 chr6:133850689 . . 0 hm6A_associated_SNPs_8989 0 0 1 3 133850688 133850709 mRNA hsa-miR-133b EYA4 miRanda miRanda
14034 chr6 133850695 133850695 1 + C T rs538385030 133850699 + 133850679 133850719 41 AACCTTTGTGATGATTCTTAACATGACCAAATTTAAAAGTC AACCTTTGTGATGATTTTTAACATGACCAAATTTAAAAGTC < 41bp 1 0.145113341330324 1 0.121162861585617 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 17 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850699 chr6:133850695 . . 0 hm6A_associated_SNPs_8990 0 0 1 2 133850688 133850709 mRNA hsa-miR-133a EYA4 miRanda miRanda
14034 chr6 133850695 133850695 1 + C T rs538385030 133850699 + 133850679 133850719 41 AACCTTTGTGATGATTCTTAACATGACCAAATTTAAAAGTC AACCTTTGTGATGATTTTTAACATGACCAAATTTAAAAGTC < 41bp 1 0.145113341330324 1 0.121162861585617 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 17 TARID ENSG00000227954 ncRNA_intronic Human antisense chr6:133850699 chr6:133850695 . . 0 hm6A_associated_SNPs_8990 0 0 1 2 133850688 133850709 mRNA hsa-miR-133b EYA4 miRanda miRanda
14034 chr6 137147541 137147541 1 + G C rs532273900 137147555 + 137147535 137147575 41 TGGCTCGCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC TGGCTCCCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC < 41bp 1 0.723560465950232 1 0.210218757390976 experiment 0.552879068099537 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147555 chr6:137147541 synonymous SNV . 0 hm6A_associated_SNPs_8998 0 0 0 2 137147540 137147563 mRNA hsa-miR-34a PEX7 miRanda miRanda
14034 chr6 137147541 137147541 1 + G C rs532273900 137147555 + 137147535 137147575 41 TGGCTCGCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC TGGCTCCCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC < 41bp 1 0.723560465950232 1 0.210218757390976 experiment 0.552879068099537 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147555 chr6:137147541 synonymous SNV . 0 hm6A_associated_SNPs_8998 0 0 0 2 137147540 137147563 mRNA hsa-miR-34c-5p PEX7 miRanda miRanda
14034 chr6 138203098 138203098 1 + T C rs73778206 138203082 + 138203062 138203102 41 GTGATTCTGAGGCTGCTGAGACTGAACATGTTCACATTGAC GTGATTCTGAGGCTGCTGAGACTGAACATGTTCACACTGAC < 41bp 1 0.665001462423185 1 0.994600117206573 experiment 0.66999707515363 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 TNFAIP3 ENSG00000118503 UTR3 Human protein_coding chr6:138203082 chr6:138203098 . . 0 hm6A_associated_SNPs_9000 0 0 1 1 138203085 138203107 mRNA hsa-miR-544 TNFAIP3 miRanda miRanda
14034 chr6 138203098 138203098 1 + T C rs73778206 138203087 + 138203067 138203107 41 TCTGAGGCTGCTGAGACTGAACATGTTCACATTGACAGAAA TCTGAGGCTGCTGAGACTGAACATGTTCACACTGACAGAAA < 41bp 1 0.658793525327102 1 0.993183612823486 experiment 0.682412949345796 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 TNFAIP3 ENSG00000118503 UTR3 Human protein_coding chr6:138203087 chr6:138203098 . . 0 hm6A_associated_SNPs_9001 0 0 1 1 138203085 138203107 mRNA hsa-miR-544 TNFAIP3 miRanda miRanda
14034 chr6 138203098 138203098 1 + T C rs73778206 138203109 + 138203089 138203129 41 ATGTTCACATTGACAGAAAAACAAGCTGCTCTTTATAATAT ATGTTCACACTGACAGAAAAACAAGCTGCTCTTTATAATAT < 41bp 1 0.586712699181006 1 0.931792318820953 experiment 0.826574601637989 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 TNFAIP3 ENSG00000118503 UTR3 Human protein_coding chr6:138203109 chr6:138203098 . . 0 hm6A_associated_SNPs_9002 0 0 1 1 138203085 138203107 mRNA hsa-miR-544 TNFAIP3 miRanda miRanda
14034 chr6 142540008 142540008 1 + T A rs114226201 142540015 + 142539995 142540035 41 ATAGGGCTGATGTTAGCAAGACCCTAAAAATGTCCATTGAA ATAGGGCTGATGTAAGCAAGACCCTAAAAATGTCCATTGAA < 41bp 1 0.216764796566271 1 0.26702469587326 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540015 chr6:142540008 . . 0 hm6A_associated_SNPs_9014 0 0 1 1 142539998 142540017 mRNA hsa-miR-431 VTA1 miRanda miRanda
14034 chr6 142540160 142540160 1 + G T rs547121854 142540180 + 142540160 142540200 41 GCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG TCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG < 41bp 1 0.20044418427963 1 0.130363702774048 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540180 chr6:142540160 . . 0 hm6A_associated_SNPs_9015 0 0 1 4 142540136 142540160 mRNA hsa-miR-186 VTA1 miRanda miRanda
14034 chr6 142540160 142540160 1 + G T rs547121854 142540180 + 142540160 142540200 41 GCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG TCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG < 41bp 1 0.20044418427963 1 0.130363702774048 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540180 chr6:142540160 . . 0 hm6A_associated_SNPs_9015 0 0 1 4 142540153 142540174 mRNA hsa-miR-374a VTA1 miRanda miRanda
14034 chr6 142540160 142540160 1 + G T rs547121854 142540180 + 142540160 142540200 41 GCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG TCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG < 41bp 1 0.20044418427963 1 0.130363702774048 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540180 chr6:142540160 . . 0 hm6A_associated_SNPs_9015 0 0 1 4 142540152 142540171 mRNA hsa-miR-590-3p VTA1 miRanda miRanda
14034 chr6 142540160 142540160 1 + G T rs547121854 142540180 + 142540160 142540200 41 GCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG TCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG < 41bp 1 0.20044418427963 1 0.130363702774048 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540180 chr6:142540160 . . 0 hm6A_associated_SNPs_9015 0 0 1 4 142540153 142540174 mRNA hsa-miR-374b VTA1 miRanda miRanda
14034 chr6 142540161 142540161 1 + C A rs568529136 142540180 + 142540160 142540200 41 GCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG GATATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG < 41bp 1 0.193237642783018 1 0.155365020036697 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540180 chr6:142540161 . . 0 hm6A_associated_SNPs_9016 0 0 1 3 142540153 142540174 mRNA hsa-miR-374a VTA1 miRanda miRanda
14034 chr6 142540161 142540161 1 + C A rs568529136 142540180 + 142540160 142540200 41 GCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG GATATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG < 41bp 1 0.193237642783018 1 0.155365020036697 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540180 chr6:142540161 . . 0 hm6A_associated_SNPs_9016 0 0 1 3 142540152 142540171 mRNA hsa-miR-590-3p VTA1 miRanda miRanda
14034 chr6 142540161 142540161 1 + C A rs568529136 142540180 + 142540160 142540200 41 GCTATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG GATATAAAATTATAAATGTAACTTTTAATAAAGATAGCCAG < 41bp 1 0.193237642783018 1 0.155365020036697 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142540180 chr6:142540161 . . 0 hm6A_associated_SNPs_9016 0 0 1 3 142540153 142540174 mRNA hsa-miR-374b VTA1 miRanda miRanda
14034 chr6 143810754 143810754 1 + G A rs140007169 143810739 + 143810719 143810759 41 TGAGGAAAAATCTGTTGGAGACATAGGTCTAGGATGTGTGA TGAGGAAAAATCTGTTGGAGACATAGGTCTAGGATATGTGA < 41bp 1 0.212241349152092 1 0.644696354866028 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 PEX3 ENSG00000229036 ncRNA_intronic Human transcribed_processed_pseudogene chr6:143810739 chr6:143810754 . . 0 hm6A_associated_SNPs_9027 1 0 1 2 143810739 143810760 mRNA hsa-miR-377 PEX3 miRanda miRanda
14034 chr6 143810754 143810754 1 + G A rs140007169 143810739 + 143810719 143810759 41 TGAGGAAAAATCTGTTGGAGACATAGGTCTAGGATGTGTGA TGAGGAAAAATCTGTTGGAGACATAGGTCTAGGATATGTGA < 41bp 1 0.212241349152092 1 0.644696354866028 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 PEX3 ENSG00000229036 ncRNA_intronic Human transcribed_processed_pseudogene chr6:143810739 chr6:143810754 . . 0 hm6A_associated_SNPs_9027 1 0 1 2 143810739 143810758 mRNA hsa-miR-329 PEX3 miRanda miRanda
14034 chr6 146206203 146206203 1 - A G rs542741983 146206189 - 146206169 146206209 41 CTTACATTCTTTTACTAATAACATGTCATGCTGAGATTCAG CTTACACTCTTTTACTAATAACATGTCATGCTGAGATTCAG < 41bp 1 0.0998078329692935 1 0.00225883722305298 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 LOC100507557 ENSG00000235652 ncRNA_exonic Human antisense chr6:146206189 chr6:146206203 . . 0 hm6A_associated_SNPs_9035 0 0 1 1 146206197 146206218 mRNA hsa-miR-186 SHPRH miRanda miRanda
14034 chr6 150131878 150131878 1 + T C rs150749992 150131861 + 150131841 150131881 41 ACCATCACAGCTTGTTTTGGACTTTGTTACACTGTTATTTT ACCATCACAGCTTGTTTTGGACTTTGTTACACTGTTACTTT < 41bp 1 0.702284644276989 1 0.979881823062897 experiment 0.595430711446021 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 PCMT1 ENSG00000120265 UTR3 Human protein_coding chr6:150131861 chr6:150131878 . . 0 hm6A_associated_SNPs_9043 0 0 1 2 150131858 150131879 mRNA hsa-miR-194 PCMT1 miRanda miRanda
14034 chr6 150131878 150131878 1 + T C rs150749992 150131861 + 150131841 150131881 41 ACCATCACAGCTTGTTTTGGACTTTGTTACACTGTTATTTT ACCATCACAGCTTGTTTTGGACTTTGTTACACTGTTACTTT < 41bp 1 0.702284644276989 1 0.979881823062897 experiment 0.595430711446021 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 PCMT1 ENSG00000120265 UTR3 Human protein_coding chr6:150131861 chr6:150131878 . . 0 hm6A_associated_SNPs_9043 0 0 1 2 150131868 150131890 mRNA hsa-miR-155 PCMT1 miRanda miRanda
14034 chr6 150132092 150132092 1 + A G rs7818 150132090 + 150132070 150132110 41 AGTGGTTTTTCTTTTCTTGGACACTTAATTCTGTTCTGATA AGTGGTTTTTCTTTTCTTGGACGCTTAATTCTGTTCTGATA Direct Loss 1 0.467409075195465 1 0.377296030521393 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 23 PCMT1 ENSG00000120265 UTR3 Human protein_coding chr6:150132090 chr6:150132092 . . 0 hm6A_associated_SNPs_9044 0 0 1 2 150132090 150132111 mRNA hsa-miR-361-5p PCMT1 miRanda miRanda
14034 chr6 150132092 150132092 1 + A G rs7818 150132090 + 150132070 150132110 41 AGTGGTTTTTCTTTTCTTGGACACTTAATTCTGTTCTGATA AGTGGTTTTTCTTTTCTTGGACGCTTAATTCTGTTCTGATA Direct Loss 1 0.467409075195465 1 0.377296030521393 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 23 PCMT1 ENSG00000120265 UTR3 Human protein_coding chr6:150132090 chr6:150132092 . . 0 hm6A_associated_SNPs_9044 0 0 1 2 150132090 150132111 mRNA hsa-miR-383 PCMT1 miRanda miRanda
14034 chr6 150292894 150292894 1 + G A rs62441833 150292903 + 150292883 150292923 41 CTAGTAAAATAGCATGCTGGACTTCAGACCTCAGGGATCCT CTAGTAAAATAACATGCTGGACTTCAGACCTCAGGGATCCT < 41bp 1 0.198873165481809 1 0.951409518718719 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 12 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150292903 chr6:150292894 . . 0 hm6A_associated_SNPs_9045 0 0 1 1 150292884 150292903 mRNA hsa-miR-338-3p ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293826 150293849 mRNA hsa-miR-20a ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293826 150293849 mRNA hsa-miR-93 ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293828 150293849 mRNA hsa-miR-106b ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293824 150293848 mRNA hsa-miR-302a ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293824 150293848 mRNA hsa-miR-302b ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293824 150293848 mRNA hsa-miR-302c ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293824 150293848 mRNA hsa-miR-302d ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293826 150293849 mRNA hsa-miR-20b ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293838 + 150293818 150293858 41 AAAATTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAG AAAATTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAG < 41bp 1 0.575922967221957 1 0.281384289264679 experiment 0.848154065556086 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293838 chr6:150293844 . . 0 hm6A_associated_SNPs_9046 0 0 1 9 150293830 150293848 mRNA hsa-miR-302e ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293826 150293849 mRNA hsa-miR-20a ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293826 150293849 mRNA hsa-miR-93 ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293828 150293849 mRNA hsa-miR-106b ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293824 150293848 mRNA hsa-miR-302a ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293824 150293848 mRNA hsa-miR-302b ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293824 150293848 mRNA hsa-miR-302c ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293824 150293848 mRNA hsa-miR-302d ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293826 150293849 mRNA hsa-miR-20b ULBP1 miRanda miRanda
14034 chr6 150293844 150293844 1 + A G rs141741582 150293842 + 150293822 150293862 41 TTGGGCAAAGGCATGAACAGACACTTTTCAAAAGAAGACCT TTGGGCAAAGGCATGAACAGACGCTTTTCAAAAGAAGACCT Direct Loss 1 0.477670447928965 1 0.524416387081146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 ULBP1 ENSG00000111981 UTR3 Human protein_coding chr6:150293842 chr6:150293844 . . 0 hm6A_associated_SNPs_9047 0 0 1 9 150293830 150293848 mRNA hsa-miR-302e ULBP1 miRanda miRanda
14034 chr6 150570714 150570714 1 + T A rs9480066 150570719 + 150570699 150570739 41 AGTCTTTTAAAGTTGTATGAACCCTTAATTTGAAGAACTAA AGTCTTTTAAAGTTGAATGAACCCTTAATTTGAAGAACTAA < 41bp 1 0.017397405542034 1 0.118226766586304 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 PPP1R14C ENSG00000198729 UTR3 Human protein_coding chr6:150570719 chr6:150570714 . . 0 hm6A_associated_SNPs_9049 0 0 1 1 150570703 150570724 mRNA hsa-miR-296-3p PPP1R14C miRanda miRanda
14034 chr6 151422854 151422854 1 + A C rs189163715 151422840 + 151422820 151422860 41 GCAAAAGGACCTCCACCAAGACTGAAAGAAACTAATTTATT GCAAAAGGACCTCCACCAAGACTGAAAGAAACTACTTTATT < 41bp 1 0.192860024606135 1 0.991924226284027 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 35 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422840 chr6:151422854 . . 0 hm6A_associated_SNPs_9054 0 0 1 2 151422848 151422869 mRNA hsa-miR-494 MTHFD1L miRanda miRanda
14034 chr6 151422854 151422854 1 + A C rs189163715 151422840 + 151422820 151422860 41 GCAAAAGGACCTCCACCAAGACTGAAAGAAACTAATTTATT GCAAAAGGACCTCCACCAAGACTGAAAGAAACTACTTTATT < 41bp 1 0.192860024606135 1 0.991924226284027 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 35 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422840 chr6:151422854 . . 0 hm6A_associated_SNPs_9054 0 0 1 2 151422846 151422865 mRNA hsa-miR-539 MTHFD1L miRanda miRanda
14034 chr6 151422854 151422854 1 + A C rs189163715 151422850 + 151422830 151422870 41 CTCCACCAAGACTGAAAGAAACTAATTTATTTCTGTTTCTG CTCCACCAAGACTGAAAGAAACTACTTTATTTCTGTTTCTG < 41bp 1 0.135159172842563 1 0.979940056800842 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422850 chr6:151422854 . . 0 hm6A_associated_SNPs_9055 0 0 1 2 151422848 151422869 mRNA hsa-miR-494 MTHFD1L miRanda miRanda
14034 chr6 151422854 151422854 1 + A C rs189163715 151422850 + 151422830 151422870 41 CTCCACCAAGACTGAAAGAAACTAATTTATTTCTGTTTCTG CTCCACCAAGACTGAAAGAAACTACTTTATTTCTGTTTCTG < 41bp 1 0.135159172842563 1 0.979940056800842 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422850 chr6:151422854 . . 0 hm6A_associated_SNPs_9055 0 0 1 2 151422846 151422865 mRNA hsa-miR-539 MTHFD1L miRanda miRanda
14034 chr6 151422936 151422936 1 + G A rs7543 151422924 + 151422904 151422944 41 AGAATGTTTATTTTATGGGGACTAAGGGATTAGGAGTGTGA AGAATGTTTATTTTATGGGGACTAAGGGATTAAGAGTGTGA < 41bp 1 0.416150497374432 1 0.969828009605408 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422924 chr6:151422936 . . 0 hm6A_associated_SNPs_9056 0 0 1 2 151422924 151422945 mRNA hsa-miR-377 MTHFD1L miRanda miRanda
14034 chr6 151422936 151422936 1 + G A rs7543 151422924 + 151422904 151422944 41 AGAATGTTTATTTTATGGGGACTAAGGGATTAGGAGTGTGA AGAATGTTTATTTTATGGGGACTAAGGGATTAAGAGTGTGA < 41bp 1 0.416150497374432 1 0.969828009605408 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422924 chr6:151422936 . . 0 hm6A_associated_SNPs_9056 0 0 1 2 151422923 151422946 mRNA hsa-miR-342-3p MTHFD1L miRanda miRanda
14034 chr6 151422936 151422936 1 + G A rs7543 151422945 + 151422925 151422965 41 CTAAGGGATTAGGAGTGTGAACTAAAAGGTAACATTTTCCA CTAAGGGATTAAGAGTGTGAACTAAAAGGTAACATTTTCCA < 41bp 1 0.221658483337526 1 0.964705407619476 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422945 chr6:151422936 . . 0 hm6A_associated_SNPs_9057 0 0 1 2 151422924 151422945 mRNA hsa-miR-377 MTHFD1L miRanda miRanda
14034 chr6 151422936 151422936 1 + G A rs7543 151422945 + 151422925 151422965 41 CTAAGGGATTAGGAGTGTGAACTAAAAGGTAACATTTTCCA CTAAGGGATTAAGAGTGTGAACTAAAAGGTAACATTTTCCA < 41bp 1 0.221658483337526 1 0.964705407619476 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151422945 chr6:151422936 . . 0 hm6A_associated_SNPs_9057 0 0 1 2 151422923 151422946 mRNA hsa-miR-342-3p MTHFD1L miRanda miRanda
14034 chr6 151676966 151676966 1 + T C rs374162072 151676956 + 151676936 151676976 41 CTGAAGACCAGTATTTCAGAACTTTGAGAATTGGAGAGCAG CTGAAGACCAGTATTTCAGAACTTTGAGAACTGGAGAGCAG < 41bp 1 0.632460825408934 1 0.967727959156036 experiment 0.735078349182133 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 AKAP12 ENSG00000131016 UTR3 Human protein_coding chr6:151676956 chr6:151676966 . . 0 hm6A_associated_SNPs_9071 0 0 1 1 151676964 151676983 mRNA hsa-miR-455-5p AKAP12 miRanda miRanda
14034 chr6 158365429 158365429 1 + A G rs138455652 158365415 + 158365395 158365435 41 CTTCTATAAAATCCCATAGAACAATGTTTATGCTATAGCCA CTTCTATAAAATCCCATAGAACAATGTTTATGCTGTAGCCA < 41bp 1 0.444188071168396 1 0.593344807624817 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 SNX9 ENSG00000130340 UTR3 Human protein_coding chr6:158365415 chr6:158365429 . . 0 hm6A_associated_SNPs_9096 0 0 1 2 158365415 158365437 mRNA hsa-miR-135a SNX9 miRanda miRanda
14034 chr6 158365429 158365429 1 + A G rs138455652 158365415 + 158365395 158365435 41 CTTCTATAAAATCCCATAGAACAATGTTTATGCTATAGCCA CTTCTATAAAATCCCATAGAACAATGTTTATGCTGTAGCCA < 41bp 1 0.444188071168396 1 0.593344807624817 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 SNX9 ENSG00000130340 UTR3 Human protein_coding chr6:158365415 chr6:158365429 . . 0 hm6A_associated_SNPs_9096 0 0 1 2 158365415 158365437 mRNA hsa-miR-135b SNX9 miRanda miRanda
14034 chr6 163992115 163992115 1 + C A rs529604882 163992108 + 163992088 163992128 41 TGGTCCTTAACTACTCAATGACAGAGGCAGTTACTGTGAGA TGGTCCTTAACTACTCAATGACAGAGGAAGTTACTGTGAGA < 41bp 1 0.244966803388502 1 0.855262339115143 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992108 chr6:163992115 . . 0 hm6A_associated_SNPs_9133 0 0 1 2 163992107 163992127 mRNA hsa-miR-27a QKI miRanda miRanda
14034 chr6 163992115 163992115 1 + C A rs529604882 163992108 + 163992088 163992128 41 TGGTCCTTAACTACTCAATGACAGAGGCAGTTACTGTGAGA TGGTCCTTAACTACTCAATGACAGAGGAAGTTACTGTGAGA < 41bp 1 0.244966803388502 1 0.855262339115143 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992108 chr6:163992115 . . 0 hm6A_associated_SNPs_9133 0 0 1 2 163992108 163992127 mRNA hsa-miR-27b QKI miRanda miRanda
14034 chr6 163992115 163992115 1 + C A rs529604882 163992130 + 163992110 163992150 41 AGAGGCAGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT AGAGGAAGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT < 41bp 1 0.167727129453537 1 0.868307769298553 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992130 chr6:163992115 . . 0 hm6A_associated_SNPs_9134 0 0 1 2 163992107 163992127 mRNA hsa-miR-27a QKI miRanda miRanda
14034 chr6 163992115 163992115 1 + C A rs529604882 163992130 + 163992110 163992150 41 AGAGGCAGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT AGAGGAAGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT < 41bp 1 0.167727129453537 1 0.868307769298553 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992130 chr6:163992115 . . 0 hm6A_associated_SNPs_9134 0 0 1 2 163992108 163992127 mRNA hsa-miR-27b QKI miRanda miRanda
14034 chr6 163992116 163992116 1 + A G rs149759966 163992108 + 163992088 163992128 41 TGGTCCTTAACTACTCAATGACAGAGGCAGTTACTGTGAGA TGGTCCTTAACTACTCAATGACAGAGGCGGTTACTGTGAGA < 41bp 1 0.306867722494086 1 0.849237442016602 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992108 chr6:163992116 . . 0 hm6A_associated_SNPs_9135 0 0 1 2 163992107 163992127 mRNA hsa-miR-27a QKI miRanda miRanda
14034 chr6 163992116 163992116 1 + A G rs149759966 163992108 + 163992088 163992128 41 TGGTCCTTAACTACTCAATGACAGAGGCAGTTACTGTGAGA TGGTCCTTAACTACTCAATGACAGAGGCGGTTACTGTGAGA < 41bp 1 0.306867722494086 1 0.849237442016602 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992108 chr6:163992116 . . 0 hm6A_associated_SNPs_9135 0 0 1 2 163992108 163992127 mRNA hsa-miR-27b QKI miRanda miRanda
14034 chr6 163992116 163992116 1 + A G rs149759966 163992130 + 163992110 163992150 41 AGAGGCAGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT AGAGGCGGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT < 41bp 1 0.156194858556404 1 0.857929110527039 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992130 chr6:163992116 . . 0 hm6A_associated_SNPs_9136 0 0 1 2 163992107 163992127 mRNA hsa-miR-27a QKI miRanda miRanda
14034 chr6 163992116 163992116 1 + A G rs149759966 163992130 + 163992110 163992150 41 AGAGGCAGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT AGAGGCGGTTACTGTGAGAGACTTCTAGGAATCTTTTTCTT < 41bp 1 0.156194858556404 1 0.857929110527039 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 QKI ENSG00000112531 UTR3 Human protein_coding chr6:163992130 chr6:163992116 . . 0 hm6A_associated_SNPs_9136 0 0 1 2 163992108 163992127 mRNA hsa-miR-27b QKI miRanda miRanda
14034 chr6 168364275 168364275 1 + G A rs144060265 168364295 + 168364275 168364315 41 GTAGAGTGAATAATGTAAGGACACTCACCTCTGTTGAAATT ATAGAGTGAATAATGTAAGGACACTCACCTCTGTTGAAATT < 41bp 1 0.0364797832514669 1 0.348239958286285 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 1 AFDN ENSG00000130396 UTR3 Human protein_coding chr6:168364295 chr6:168364275 . . 0 hm6A_associated_SNPs_9146 0 0 1 1 168364254 168364276 mRNA hsa-miR-136 MLLT4 miRanda miRanda
14034 chr6 170881581 170881581 1 + G A rs118056400 170881562 + 170881542 170881582 41 TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGT TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCAT < 41bp 1 0.383521902697585 1 0.868500351905823 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 TBP ENSG00000112592 UTR3 Human protein_coding chr6:170881562 chr6:170881581 . . 0 hm6A_associated_SNPs_9158 0 0 1 6 170881568 170881589 mRNA hsa-miR-15a TBP miRanda miRanda
14034 chr6 170881581 170881581 1 + G A rs118056400 170881562 + 170881542 170881582 41 TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGT TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCAT < 41bp 1 0.383521902697585 1 0.868500351905823 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 TBP ENSG00000112592 UTR3 Human protein_coding chr6:170881562 chr6:170881581 . . 0 hm6A_associated_SNPs_9158 0 0 1 6 170881567 170881589 mRNA hsa-miR-16 TBP miRanda miRanda
14034 chr6 170881581 170881581 1 + G A rs118056400 170881562 + 170881542 170881582 41 TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGT TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCAT < 41bp 1 0.383521902697585 1 0.868500351905823 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 TBP ENSG00000112592 UTR3 Human protein_coding chr6:170881562 chr6:170881581 . . 0 hm6A_associated_SNPs_9158 0 0 1 6 170881568 170881589 mRNA hsa-miR-15b TBP miRanda miRanda
14034 chr6 170881581 170881581 1 + G A rs118056400 170881562 + 170881542 170881582 41 TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGT TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCAT < 41bp 1 0.383521902697585 1 0.868500351905823 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 TBP ENSG00000112592 UTR3 Human protein_coding chr6:170881562 chr6:170881581 . . 0 hm6A_associated_SNPs_9158 0 0 1 6 170881569 170881589 mRNA hsa-miR-195 TBP miRanda miRanda
14034 chr6 170881581 170881581 1 + G A rs118056400 170881562 + 170881542 170881582 41 TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGT TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCAT < 41bp 1 0.383521902697585 1 0.868500351905823 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 TBP ENSG00000112592 UTR3 Human protein_coding chr6:170881562 chr6:170881581 . . 0 hm6A_associated_SNPs_9158 0 0 1 6 170881568 170881589 mRNA hsa-miR-424 TBP miRanda miRanda
14034 chr6 170881581 170881581 1 + G A rs118056400 170881562 + 170881542 170881582 41 TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGT TGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCAT < 41bp 1 0.383521902697585 1 0.868500351905823 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 TBP ENSG00000112592 UTR3 Human protein_coding chr6:170881562 chr6:170881581 . . 0 hm6A_associated_SNPs_9158 0 0 1 6 170881569 170881589 mRNA hsa-miR-497 TBP miRanda miRanda
14034 chr7 825786 825786 1 + T C rs9195 825778 + 825758 825798 41 AAAAGGAATTTAGAATCCTAACAACTTATCAGATTTCTCCT AAAAGGAATTTAGAATCCTAACAACTTACCAGATTTCTCCT < 41bp 1 0.720491913930557 1 0.890255808830261 experiment 0.559016172138885 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 DNAAF5 ENSG00000164818 UTR3 Human protein_coding chr7:825778 chr7:825786 . . 0 hm6A_associated_SNPs_9179 0 0 1 1 825776 825797 mRNA hsa-miR-539 HEATR2 miRanda miRanda
14034 chr7 913016 913016 1 + G A rs201230814 913021 + 913001 913041 41 ATATACTGGGACAGCGTGAAACACTGGAATCCTTCATGGAC ATATACTGGGACAGCATGAAACACTGGAATCCTTCATGGAC < 41bp 1 0.792755925720544 1 0.975915312767029 experiment 0.414488148558912 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 16 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:913021 chr7:913016 . . 0 hm6A_associated_SNPs_9185 0 0 1 2 913003 913028 mRNA hsa-miR-199a-5p SUN1 miRanda miRanda
14034 chr7 913016 913016 1 + G A rs201230814 913021 + 913001 913041 41 ATATACTGGGACAGCGTGAAACACTGGAATCCTTCATGGAC ATATACTGGGACAGCATGAAACACTGGAATCCTTCATGGAC < 41bp 1 0.792755925720544 1 0.975915312767029 experiment 0.414488148558912 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 16 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:913021 chr7:913016 . . 0 hm6A_associated_SNPs_9185 0 0 1 2 913005 913028 mRNA hsa-miR-199b-5p SUN1 miRanda miRanda
14034 chr7 913037 913037 1 + T C rs185782813 913021 + 913001 913041 41 ATATACTGGGACAGCGTGAAACACTGGAATCCTTCATGGAC ATATACTGGGACAGCGTGAAACACTGGAATCCTTCACGGAC < 41bp 1 0.768076043080585 1 0.973599553108215 experiment 0.46384791383883 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:913021 chr7:913037 . . 0 hm6A_associated_SNPs_9186 0 0 1 1 913023 913047 mRNA hsa-miR-339-5p SUN1 miRanda miRanda
14034 chr7 913047 913047 1 + C T rs527536067 913063 + 913043 913083 41 AGGGCATATACAATGATGGGACAGTGCCACACTCCTTCAAT AGGGTATATACAATGATGGGACAGTGCCACACTCCTTCAAT < 41bp 1 0.727498757340559 1 0.979710102081299 experiment 0.545002485318881 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:913063 chr7:913047 . . 0 hm6A_associated_SNPs_9187 0 0 1 1 913023 913047 mRNA hsa-miR-339-5p SUN1 miRanda miRanda
14034 chr7 913203 913203 1 + G A rs138230626 913214 + 913194 913234 41 GTTGAACACGTGGCTCTCAGACACTCCTTGTTTTTAACGGG GTTGAACACATGGCTCTCAGACACTCCTTGTTTTTAACGGG < 41bp 1 0.674272114332749 1 0.732402980327606 experiment 0.651455771334501 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:913214 chr7:913203 . . 0 hm6A_associated_SNPs_9188 0 0 1 1 913198 913221 mRNA hsa-miR-122 SUN1 miRanda miRanda
14034 chr7 914148 914148 1 + G A rs543705906 914149 + 914129 914169 41 TGTTGTGTTTTCAGAAAAAGACAAAACGATGGTGCTGACTG TGTTGTGTTTTCAGAAAAAAACAAAACGATGGTGCTGACTG < 41bp 1 0.365410633718146 1 0.0627390742301941 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:914149 chr7:914148 . . 0 hm6A_associated_SNPs_9192 0 0 1 5 914148 914169 mRNA hsa-miR-15a SUN1 miRanda miRanda
14034 chr7 914148 914148 1 + G A rs543705906 914149 + 914129 914169 41 TGTTGTGTTTTCAGAAAAAGACAAAACGATGGTGCTGACTG TGTTGTGTTTTCAGAAAAAAACAAAACGATGGTGCTGACTG < 41bp 1 0.365410633718146 1 0.0627390742301941 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:914149 chr7:914148 . . 0 hm6A_associated_SNPs_9192 0 0 1 5 914144 914165 mRNA hsa-miR-29a SUN1 miRanda miRanda
14034 chr7 914148 914148 1 + G A rs543705906 914149 + 914129 914169 41 TGTTGTGTTTTCAGAAAAAGACAAAACGATGGTGCTGACTG TGTTGTGTTTTCAGAAAAAAACAAAACGATGGTGCTGACTG < 41bp 1 0.365410633718146 1 0.0627390742301941 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:914149 chr7:914148 . . 0 hm6A_associated_SNPs_9192 0 0 1 5 914143 914165 mRNA hsa-miR-29b SUN1 miRanda miRanda
14034 chr7 914148 914148 1 + G A rs543705906 914149 + 914129 914169 41 TGTTGTGTTTTCAGAAAAAGACAAAACGATGGTGCTGACTG TGTTGTGTTTTCAGAAAAAAACAAAACGATGGTGCTGACTG < 41bp 1 0.365410633718146 1 0.0627390742301941 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:914149 chr7:914148 . . 0 hm6A_associated_SNPs_9192 0 0 1 5 914144 914165 mRNA hsa-miR-29c SUN1 miRanda miRanda
14034 chr7 914148 914148 1 + G A rs543705906 914149 + 914129 914169 41 TGTTGTGTTTTCAGAAAAAGACAAAACGATGGTGCTGACTG TGTTGTGTTTTCAGAAAAAAACAAAACGATGGTGCTGACTG < 41bp 1 0.365410633718146 1 0.0627390742301941 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SUN1 ENSG00000164828 UTR3 Human protein_coding chr7:914149 chr7:914148 . . 0 hm6A_associated_SNPs_9192 0 0 1 5 914148 914169 mRNA hsa-miR-424 SUN1 miRanda miRanda
14034 chr7 1098554 1098554 1 + A G rs73267962 1098551 + 1098531 1098571 41 AGATGTTTCCTAGAAAAATGACAAATAGTAAAATGAACAAA AGATGTTTCCTAGAAAAATGACAGATAGTAAAATGAACAAA < 41bp 1 0.115442351681363 1 0.888896822929382 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 GPR146 ENSG00000257607 ncRNA_exonic Human antisense chr7:1098551 chr7:1098554 . . 0 hm6A_associated_SNPs_9200 0 0 0 1 1098550 1098571 mRNA hsa-miR-375 GPR146 miRanda miRanda
14034 chr7 2290685 2290685 1 + C T rs1062492 2290680 + 2290660 2290700 41 GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCAC GCAGGAGACGTGGCTGCTGAACAGCTGCAAACCATCTTCAC < 41bp 1 0.45279663357218 1 0.937408089637756 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 26 NUDT1 ENSG00000106268 UTR3 Human protein_coding chr7:2290680 chr7:2290685 . . 0 hm6A_associated_SNPs_9226 0 0 0 1 2290681 2290704 mRNA hsa-miR-125a-3p NUDT1 miRanda miRanda
14034 chr7 2418350 2418350 1 + C T rs149152140 2418365 + 2418345 2418385 41 AAATACTCTAAGATCTTTGAACAGAAGGATCGTTTGAGTCA AAATATTCTAAGATCTTTGAACAGAAGGATCGTTTGAGTCA < 41bp 1 0.793595712137217 1 0.525284826755524 experiment 0.412808575725566 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 6 EIF3B ENSG00000106263 CDS Human protein_coding chr7:2418365 chr7:2418350 synonymous SNV . 0 hm6A_associated_SNPs_9230 0 0 1 1 2418334 2418353 mRNA hsa-miR-496 EIF3B miRanda miRanda
14034 chr7 2702121 2702121 1 + C A rs148875498 2702137 + 2702117 2702157 41 CCCCCTTCCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTT CCCCATTCCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTT < 41bp 1 0.632631927069459 1 0.899870693683624 experiment 0.734736145861083 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702137 chr7:2702121 . . 0 hm6A_associated_SNPs_9252 0 0 1 2 2702116 2702137 mRNA hsa-miR-330-5p TTYH3 miRanda miRanda
14034 chr7 2702121 2702121 1 + C A rs148875498 2702137 + 2702117 2702157 41 CCCCCTTCCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTT CCCCATTCCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTT < 41bp 1 0.632631927069459 1 0.899870693683624 experiment 0.734736145861083 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702137 chr7:2702121 . . 0 hm6A_associated_SNPs_9252 0 0 1 2 2702118 2702137 mRNA hsa-miR-326 TTYH3 miRanda miRanda
14034 chr7 2702131 2702131 1 + C T rs143572148 2702137 + 2702117 2702157 41 CCCCCTTCCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTT CCCCCTTCCCCCACTCAGAGACTGGGCAGCTGTGTCTGGTT < 41bp 1 0.597777434845635 1 0.919060230255127 experiment 0.804445130308731 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702137 chr7:2702131 . . 0 hm6A_associated_SNPs_9253 0 0 1 2 2702116 2702137 mRNA hsa-miR-330-5p TTYH3 miRanda miRanda
14034 chr7 2702131 2702131 1 + C T rs143572148 2702137 + 2702117 2702157 41 CCCCCTTCCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTT CCCCCTTCCCCCACTCAGAGACTGGGCAGCTGTGTCTGGTT < 41bp 1 0.597777434845635 1 0.919060230255127 experiment 0.804445130308731 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702137 chr7:2702131 . . 0 hm6A_associated_SNPs_9253 0 0 1 2 2702118 2702137 mRNA hsa-miR-326 TTYH3 miRanda miRanda
14034 chr7 2702350 2702350 1 + C G rs116694861 2702357 + 2702337 2702377 41 CCCTGCTGTCCCCCCTTGGGACTAACCACTAACCTCACCCC CCCTGCTGTCCCCGCTTGGGACTAACCACTAACCTCACCCC < 41bp 1 0.588519717895664 1 0.972021460533142 experiment 0.822960564208672 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 14 TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702357 chr7:2702350 . . 0 hm6A_associated_SNPs_9257 0 0 1 1 2702346 2702367 mRNA hsa-miR-140-5p TTYH3 miRanda miRanda
14034 chr7 2702350 2702350 1 + C G rs116694861 2702361 + 2702341 2702381 41 GCTGTCCCCCCTTGGGACTAACCACTAACCTCACCCCCAAA GCTGTCCCCGCTTGGGACTAACCACTAACCTCACCCCCAAA < 41bp 1 0.339978187960565 1 0.928739488124847 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702361 chr7:2702350 . . 0 hm6A_associated_SNPs_9258 0 0 1 1 2702346 2702367 mRNA hsa-miR-140-5p TTYH3 miRanda miRanda
14034 chr7 5024674 5024674 1 + G A rs539080186 5024654 + 5024634 5024674 41 CAAAGTGCTCAGTAGTCAGGACATCATGTGGGCCCTGCACG CAAAGTGCTCAGTAGTCAGGACATCATGTGGGCCCTGCACA < 41bp 1 0.338942152814905 1 0.715843379497528 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 41 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5024654 chr7:5024674 . . 0 hm6A_associated_SNPs_9314 0 0 1 1 5024674 5024695 mRNA hsa-miR-153 RNF216L miRanda miRanda
14034 chr7 5036359 5036359 1 + C A rs115317907 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTAAGTCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.333516043947011 1 0.872595071792603 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036359 . . 0 hm6A_associated_SNPs_9315 0 0 1 5 5036359 5036380 mRNA hsa-miR-15a RNF216L miRanda miRanda
14034 chr7 5036359 5036359 1 + C A rs115317907 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTAAGTCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.333516043947011 1 0.872595071792603 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036359 . . 0 hm6A_associated_SNPs_9315 0 0 1 5 5036359 5036380 mRNA hsa-miR-16 RNF216L miRanda miRanda
14034 chr7 5036359 5036359 1 + C A rs115317907 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTAAGTCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.333516043947011 1 0.872595071792603 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036359 . . 0 hm6A_associated_SNPs_9315 0 0 1 5 5036358 5036378 mRNA hsa-miR-214 RNF216L miRanda miRanda
14034 chr7 5036359 5036359 1 + C A rs115317907 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTAAGTCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.333516043947011 1 0.872595071792603 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036359 . . 0 hm6A_associated_SNPs_9315 0 0 1 5 5036357 5036380 mRNA hsa-miR-15b RNF216L miRanda miRanda
14034 chr7 5036359 5036359 1 + C A rs115317907 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTAAGTCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.333516043947011 1 0.872595071792603 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036359 . . 0 hm6A_associated_SNPs_9315 0 0 1 5 5036358 5036380 mRNA hsa-miR-424 RNF216L miRanda miRanda
14034 chr7 5036360 5036360 1 + G A rs550339584 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTACATCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.339376179096986 1 0.914151787757874 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036360 . . 0 hm6A_associated_SNPs_9316 0 0 1 7 5036359 5036380 mRNA hsa-miR-15a RNF216L miRanda miRanda
14034 chr7 5036360 5036360 1 + G A rs550339584 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTACATCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.339376179096986 1 0.914151787757874 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036360 . . 0 hm6A_associated_SNPs_9316 0 0 1 7 5036359 5036380 mRNA hsa-miR-16 RNF216L miRanda miRanda
14034 chr7 5036360 5036360 1 + G A rs550339584 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTACATCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.339376179096986 1 0.914151787757874 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036360 . . 0 hm6A_associated_SNPs_9316 0 0 1 7 5036358 5036378 mRNA hsa-miR-214 RNF216L miRanda miRanda
14034 chr7 5036360 5036360 1 + G A rs550339584 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTACATCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.339376179096986 1 0.914151787757874 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036360 . . 0 hm6A_associated_SNPs_9316 0 0 1 7 5036357 5036380 mRNA hsa-miR-15b RNF216L miRanda miRanda
14034 chr7 5036360 5036360 1 + G A rs550339584 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTACATCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.339376179096986 1 0.914151787757874 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036360 . . 0 hm6A_associated_SNPs_9316 0 0 1 7 5036360 5036380 mRNA hsa-miR-195 RNF216L miRanda miRanda
14034 chr7 5036360 5036360 1 + G A rs550339584 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTACATCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.339376179096986 1 0.914151787757874 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036360 . . 0 hm6A_associated_SNPs_9316 0 0 1 7 5036358 5036380 mRNA hsa-miR-424 RNF216L miRanda miRanda
14034 chr7 5036360 5036360 1 + G A rs550339584 5036370 + 5036350 5036390 41 TGTGATCTACGTCCTGTGGAACCTGCTGCTACTGTGGCCCC TGTGATCTACATCCTGTGGAACCTGCTGCTACTGTGGCCCC < 41bp 1 0.339376179096986 1 0.914151787757874 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036370 chr7:5036360 . . 0 hm6A_associated_SNPs_9316 0 0 1 7 5036360 5036380 mRNA hsa-miR-497 RNF216L miRanda miRanda
14034 chr7 5036972 5036972 1 + G A rs143277697 5036954 + 5036934 5036974 41 GCCAGCAGAGATGGAGAGTGACTGCTGGCAGAAGGCAGGCG GCCAGCAGAGATGGAGAGTGACTGCTGGCAGAAGGCAGACG < 41bp 1 0.747889886449116 1 0.956506013870239 experiment 0.504220227101769 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036954 chr7:5036972 . . 0 hm6A_associated_SNPs_9321 0 0 1 2 5036962 5036985 mRNA hsa-miR-21 RNF216L miRanda miRanda
14034 chr7 5036972 5036972 1 + G A rs143277697 5036954 + 5036934 5036974 41 GCCAGCAGAGATGGAGAGTGACTGCTGGCAGAAGGCAGGCG GCCAGCAGAGATGGAGAGTGACTGCTGGCAGAAGGCAGACG < 41bp 1 0.747889886449116 1 0.956506013870239 experiment 0.504220227101769 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036954 chr7:5036972 . . 0 hm6A_associated_SNPs_9321 0 0 1 2 5036964 5036985 mRNA hsa-miR-590-5p RNF216L miRanda miRanda
14034 chr7 5037138 5037138 1 + C G rs140243984 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCGCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.52646816466355 1 0.951903760433197 experiment 0.947063670672901 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037138 . . 0 hm6A_associated_SNPs_9322 0 0 1 6 5037137 5037161 mRNA hsa-miR-20a RNF216L miRanda miRanda
14034 chr7 5037138 5037138 1 + C G rs140243984 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCGCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.52646816466355 1 0.951903760433197 experiment 0.947063670672901 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037138 . . 0 hm6A_associated_SNPs_9322 0 0 1 6 5037136 5037160 mRNA hsa-miR-302a RNF216L miRanda miRanda
14034 chr7 5037138 5037138 1 + C G rs140243984 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCGCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.52646816466355 1 0.951903760433197 experiment 0.947063670672901 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037138 . . 0 hm6A_associated_SNPs_9322 0 0 1 6 5037137 5037160 mRNA hsa-miR-302b RNF216L miRanda miRanda
14034 chr7 5037138 5037138 1 + C G rs140243984 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCGCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.52646816466355 1 0.951903760433197 experiment 0.947063670672901 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037138 . . 0 hm6A_associated_SNPs_9322 0 0 1 6 5037135 5037160 mRNA hsa-miR-302d RNF216L miRanda miRanda
14034 chr7 5037138 5037138 1 + C G rs140243984 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCGCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.52646816466355 1 0.951903760433197 experiment 0.947063670672901 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037138 . . 0 hm6A_associated_SNPs_9322 0 0 1 6 5037134 5037160 mRNA hsa-miR-373 RNF216L miRanda miRanda
14034 chr7 5037138 5037138 1 + C G rs140243984 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCGCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.52646816466355 1 0.951903760433197 experiment 0.947063670672901 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037138 . . 0 hm6A_associated_SNPs_9322 0 0 1 6 5037138 5037160 mRNA hsa-miR-520d-3p RNF216L miRanda miRanda
14034 chr7 5037139 5037139 1 + C G rs143814177 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCGCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.519787693596072 1 0.952115297317505 experiment 0.960424612807856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037139 . . 0 hm6A_associated_SNPs_9323 0 0 1 6 5037137 5037161 mRNA hsa-miR-20a RNF216L miRanda miRanda
14034 chr7 5037139 5037139 1 + C G rs143814177 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCGCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.519787693596072 1 0.952115297317505 experiment 0.960424612807856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037139 . . 0 hm6A_associated_SNPs_9323 0 0 1 6 5037136 5037160 mRNA hsa-miR-302a RNF216L miRanda miRanda
14034 chr7 5037139 5037139 1 + C G rs143814177 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCGCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.519787693596072 1 0.952115297317505 experiment 0.960424612807856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037139 . . 0 hm6A_associated_SNPs_9323 0 0 1 6 5037137 5037160 mRNA hsa-miR-302b RNF216L miRanda miRanda
14034 chr7 5037139 5037139 1 + C G rs143814177 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCGCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.519787693596072 1 0.952115297317505 experiment 0.960424612807856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037139 . . 0 hm6A_associated_SNPs_9323 0 0 1 6 5037135 5037160 mRNA hsa-miR-302d RNF216L miRanda miRanda
14034 chr7 5037139 5037139 1 + C G rs143814177 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCGCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.519787693596072 1 0.952115297317505 experiment 0.960424612807856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037139 . . 0 hm6A_associated_SNPs_9323 0 0 1 6 5037134 5037160 mRNA hsa-miR-373 RNF216L miRanda miRanda
14034 chr7 5037139 5037139 1 + C G rs143814177 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCGCAATTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.519787693596072 1 0.952115297317505 experiment 0.960424612807856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037139 . . 0 hm6A_associated_SNPs_9323 0 0 1 6 5037138 5037160 mRNA hsa-miR-520d-3p RNF216L miRanda miRanda
14034 chr7 5037142 5037142 1 + A G rs571086765 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAGTTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.490112166616074 1 0.938621819019318 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037142 . . 0 hm6A_associated_SNPs_9324 0 0 1 7 5037137 5037161 mRNA hsa-miR-20a RNF216L miRanda miRanda
14034 chr7 5037142 5037142 1 + A G rs571086765 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAGTTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.490112166616074 1 0.938621819019318 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037142 . . 0 hm6A_associated_SNPs_9324 0 0 1 7 5037142 5037166 mRNA hsa-miR-150 RNF216L miRanda miRanda
14034 chr7 5037142 5037142 1 + A G rs571086765 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAGTTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.490112166616074 1 0.938621819019318 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037142 . . 0 hm6A_associated_SNPs_9324 0 0 1 7 5037136 5037160 mRNA hsa-miR-302a RNF216L miRanda miRanda
14034 chr7 5037142 5037142 1 + A G rs571086765 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAGTTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.490112166616074 1 0.938621819019318 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037142 . . 0 hm6A_associated_SNPs_9324 0 0 1 7 5037137 5037160 mRNA hsa-miR-302b RNF216L miRanda miRanda
14034 chr7 5037142 5037142 1 + A G rs571086765 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAGTTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.490112166616074 1 0.938621819019318 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037142 . . 0 hm6A_associated_SNPs_9324 0 0 1 7 5037135 5037160 mRNA hsa-miR-302d RNF216L miRanda miRanda
14034 chr7 5037142 5037142 1 + A G rs571086765 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAGTTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.490112166616074 1 0.938621819019318 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037142 . . 0 hm6A_associated_SNPs_9324 0 0 1 7 5037134 5037160 mRNA hsa-miR-373 RNF216L miRanda miRanda
14034 chr7 5037142 5037142 1 + A G rs571086765 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAGTTACGTACAAGACACTTTGGGAGGAAAGACGA < 41bp 1 0.490112166616074 1 0.938621819019318 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037142 . . 0 hm6A_associated_SNPs_9324 0 0 1 7 5037138 5037160 mRNA hsa-miR-520d-3p RNF216L miRanda miRanda
14034 chr7 5037172 5037172 1 + C A rs4439026 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGAAGA < 41bp 1 0.48687959829785 1 0.948868274688721 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037172 . . 0 hm6A_associated_SNPs_9325 0 0 0 2 5037159 5037181 mRNA hsa-miR-196a RNF216L miRanda miRanda
14034 chr7 5037172 5037172 1 + C A rs4439026 5037154 + 5037134 5037174 41 GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGACGA GAGCCCCAATTACGTACAAGACACTTTGGGAGGAAAGAAGA < 41bp 1 0.48687959829785 1 0.948868274688721 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037154 chr7:5037172 . . 0 hm6A_associated_SNPs_9325 0 0 0 2 5037160 5037181 mRNA hsa-miR-196b RNF216L miRanda miRanda
14034 chr7 5037758 5037758 1 + C T rs550330534 5037739 + 5037719 5037759 41 CCTGTGGGTCTCTGCAAGTGACAGATGTGTTGTTTTTAACA CCTGTGGGTCTCTGCAAGTGACAGATGTGTTGTTTTTAATA < 41bp 1 0.431658680033352 1 0.00463798642158508 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037739 chr7:5037758 . . 0 hm6A_associated_SNPs_9327 0 0 1 3 5037745 5037765 mRNA hsa-miR-200b RNF216L miRanda miRanda
14034 chr7 5037758 5037758 1 + C T rs550330534 5037739 + 5037719 5037759 41 CCTGTGGGTCTCTGCAAGTGACAGATGTGTTGTTTTTAACA CCTGTGGGTCTCTGCAAGTGACAGATGTGTTGTTTTTAATA < 41bp 1 0.431658680033352 1 0.00463798642158508 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037739 chr7:5037758 . . 0 hm6A_associated_SNPs_9327 0 0 1 3 5037744 5037765 mRNA hsa-miR-200c RNF216L miRanda miRanda
14034 chr7 5037758 5037758 1 + C T rs550330534 5037739 + 5037719 5037759 41 CCTGTGGGTCTCTGCAAGTGACAGATGTGTTGTTTTTAACA CCTGTGGGTCTCTGCAAGTGACAGATGTGTTGTTTTTAATA < 41bp 1 0.431658680033352 1 0.00463798642158508 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037739 chr7:5037758 . . 0 hm6A_associated_SNPs_9327 0 0 1 3 5037744 5037765 mRNA hsa-miR-429 RNF216L miRanda miRanda
14034 chr7 5105819 5105819 1 + T A rs537248696 5105800 + 5105780 5105820 41 TGCAAGTTTGGAATTGGATGACTTGTGAAGAGGCAGTTTTC TGCAAGTTTGGAATTGGATGACTTGTGAAGAGGCAGTTTAC < 41bp 1 0.172505886146327 1 0.116721481084824 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5105800 chr7:5105819 . . 0 hm6A_associated_SNPs_9334 0 0 1 1 5105810 5105834 mRNA hsa-miR-216a RBAK miRanda miRanda
14034 chr7 5107224 5107224 1 + A G rs78547185 5107208 + 5107188 5107228 41 AAGTTCTTTAATGTAAATTAACAAGCTAATTCTAGAATTCA AAGTTCTTTAATGTAAATTAACAAGCTAATTCTAGAGTTCA < 41bp 1 0.326527966940705 1 0.0115233361721039 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5107208 chr7:5107224 . . 0 hm6A_associated_SNPs_9341 0 0 1 2 5107219 5107241 mRNA hsa-miR-203 RBAK miRanda miRanda
14034 chr7 5107224 5107224 1 + A G rs78547185 5107208 + 5107188 5107228 41 AAGTTCTTTAATGTAAATTAACAAGCTAATTCTAGAATTCA AAGTTCTTTAATGTAAATTAACAAGCTAATTCTAGAGTTCA < 41bp 1 0.326527966940705 1 0.0115233361721039 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5107208 chr7:5107224 . . 0 hm6A_associated_SNPs_9341 0 0 1 2 5107214 5107235 mRNA hsa-miR-448 RBAK miRanda miRanda
14034 chr7 5108144 5108144 1 + C G rs183547021 5108136 + 5108116 5108156 41 TAGTAATCAGGGAAATGCAAACTTAAAACATGTAGCACTGC TAGTAATCAGGGAAATGCAAACTTAAAAGATGTAGCACTGC < 41bp 1 0.1635254009144 1 0.795491993427277 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108136 chr7:5108144 . . 0 hm6A_associated_SNPs_9342 0 0 1 2 5108133 5108152 mRNA hsa-miR-221 RBAK miRanda miRanda
14034 chr7 5108144 5108144 1 + C G rs183547021 5108136 + 5108116 5108156 41 TAGTAATCAGGGAAATGCAAACTTAAAACATGTAGCACTGC TAGTAATCAGGGAAATGCAAACTTAAAAGATGTAGCACTGC < 41bp 1 0.1635254009144 1 0.795491993427277 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108136 chr7:5108144 . . 0 hm6A_associated_SNPs_9342 0 0 1 2 5108132 5108152 mRNA hsa-miR-222 RBAK miRanda miRanda
14034 chr7 5108144 5108144 1 + C G rs183547021 5108143 + 5108123 5108163 41 CAGGGAAATGCAAACTTAAAACATGTAGCACTGCTACCCAT CAGGGAAATGCAAACTTAAAAGATGTAGCACTGCTACCCAT Direct Loss 1 0.364088928107639 1 0.863875031471252 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 22 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108143 chr7:5108144 . . 0 hm6A_associated_SNPs_9343 0 0 1 2 5108133 5108152 mRNA hsa-miR-221 RBAK miRanda miRanda
14034 chr7 5108144 5108144 1 + C G rs183547021 5108143 + 5108123 5108163 41 CAGGGAAATGCAAACTTAAAACATGTAGCACTGCTACCCAT CAGGGAAATGCAAACTTAAAAGATGTAGCACTGCTACCCAT Direct Loss 1 0.364088928107639 1 0.863875031471252 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 22 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108143 chr7:5108144 . . 0 hm6A_associated_SNPs_9343 0 0 1 2 5108132 5108152 mRNA hsa-miR-222 RBAK miRanda miRanda
14034 chr7 5108152 5108152 1 + A G rs73673288 5108136 + 5108116 5108156 41 TAGTAATCAGGGAAATGCAAACTTAAAACATGTAGCACTGC TAGTAATCAGGGAAATGCAAACTTAAAACATGTAGCGCTGC < 41bp 1 0.176047780708016 1 0.760766744613647 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108136 chr7:5108152 . . 0 hm6A_associated_SNPs_9344 0 0 1 2 5108133 5108152 mRNA hsa-miR-221 RBAK miRanda miRanda
14034 chr7 5108152 5108152 1 + A G rs73673288 5108136 + 5108116 5108156 41 TAGTAATCAGGGAAATGCAAACTTAAAACATGTAGCACTGC TAGTAATCAGGGAAATGCAAACTTAAAACATGTAGCGCTGC < 41bp 1 0.176047780708016 1 0.760766744613647 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108136 chr7:5108152 . . 0 hm6A_associated_SNPs_9344 0 0 1 2 5108132 5108152 mRNA hsa-miR-222 RBAK miRanda miRanda
14034 chr7 5108152 5108152 1 + A G rs73673288 5108143 + 5108123 5108163 41 CAGGGAAATGCAAACTTAAAACATGTAGCACTGCTACCCAT CAGGGAAATGCAAACTTAAAACATGTAGCGCTGCTACCCAT < 41bp 1 0.363541745073628 1 0.847500920295715 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 30 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108143 chr7:5108152 . . 0 hm6A_associated_SNPs_9345 0 0 1 2 5108133 5108152 mRNA hsa-miR-221 RBAK miRanda miRanda
14034 chr7 5108152 5108152 1 + A G rs73673288 5108143 + 5108123 5108163 41 CAGGGAAATGCAAACTTAAAACATGTAGCACTGCTACCCAT CAGGGAAATGCAAACTTAAAACATGTAGCGCTGCTACCCAT < 41bp 1 0.363541745073628 1 0.847500920295715 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 30 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108143 chr7:5108152 . . 0 hm6A_associated_SNPs_9345 0 0 1 2 5108132 5108152 mRNA hsa-miR-222 RBAK miRanda miRanda
14034 chr7 5108233 5108233 1 + C A rs544020556 5108232 + 5108212 5108252 41 CAAGGATGTAAGCAAGAGGAACTGTACACTACTGGTGGAAT CAAGGATGTAAGCAAGAGGAAATGTACACTACTGGTGGAAT Direct Loss 1 0.383978414616933 1 0.93991756439209 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108232 chr7:5108233 . . 0 hm6A_associated_SNPs_9346 0 0 1 1 5108222 5108244 mRNA hsa-miR-142-3p RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108394 + 5108374 5108414 41 ATAGCCTAAAACTGCACAAAACAGAACTATCTTAAGGCACA ATAGCCTAAAACTGCACAAAACAGAACTATCTGAAGGCACA < 41bp 1 0.296389797621507 1 0.978964328765869 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108394 chr7:5108406 . . 0 hm6A_associated_SNPs_9352 0 0 1 7 5108402 5108423 mRNA hsa-miR-25 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108394 + 5108374 5108414 41 ATAGCCTAAAACTGCACAAAACAGAACTATCTTAAGGCACA ATAGCCTAAAACTGCACAAAACAGAACTATCTGAAGGCACA < 41bp 1 0.296389797621507 1 0.978964328765869 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108394 chr7:5108406 . . 0 hm6A_associated_SNPs_9352 0 0 1 7 5108399 5108423 mRNA hsa-miR-32 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108394 + 5108374 5108414 41 ATAGCCTAAAACTGCACAAAACAGAACTATCTTAAGGCACA ATAGCCTAAAACTGCACAAAACAGAACTATCTGAAGGCACA < 41bp 1 0.296389797621507 1 0.978964328765869 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108394 chr7:5108406 . . 0 hm6A_associated_SNPs_9352 0 0 1 7 5108402 5108423 mRNA hsa-miR-92a RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108394 + 5108374 5108414 41 ATAGCCTAAAACTGCACAAAACAGAACTATCTTAAGGCACA ATAGCCTAAAACTGCACAAAACAGAACTATCTGAAGGCACA < 41bp 1 0.296389797621507 1 0.978964328765869 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108394 chr7:5108406 . . 0 hm6A_associated_SNPs_9352 0 0 1 7 5108401 5108423 mRNA hsa-miR-363 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108394 + 5108374 5108414 41 ATAGCCTAAAACTGCACAAAACAGAACTATCTTAAGGCACA ATAGCCTAAAACTGCACAAAACAGAACTATCTGAAGGCACA < 41bp 1 0.296389797621507 1 0.978964328765869 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108394 chr7:5108406 . . 0 hm6A_associated_SNPs_9352 0 0 1 7 5108402 5108423 mRNA hsa-miR-367 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108394 + 5108374 5108414 41 ATAGCCTAAAACTGCACAAAACAGAACTATCTTAAGGCACA ATAGCCTAAAACTGCACAAAACAGAACTATCTGAAGGCACA < 41bp 1 0.296389797621507 1 0.978964328765869 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108394 chr7:5108406 . . 0 hm6A_associated_SNPs_9352 0 0 1 7 5108396 5108416 mRNA hsa-miR-455-5p RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108394 + 5108374 5108414 41 ATAGCCTAAAACTGCACAAAACAGAACTATCTTAAGGCACA ATAGCCTAAAACTGCACAAAACAGAACTATCTGAAGGCACA < 41bp 1 0.296389797621507 1 0.978964328765869 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108394 chr7:5108406 . . 0 hm6A_associated_SNPs_9352 0 0 1 7 5108402 5108423 mRNA hsa-miR-92b RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108399 + 5108379 5108419 41 CTAAAACTGCACAAAACAGAACTATCTTAAGGCACATGTGC CTAAAACTGCACAAAACAGAACTATCTGAAGGCACATGTGC < 41bp 1 0.332228171089449 1 0.987038493156433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108399 chr7:5108406 . . 0 hm6A_associated_SNPs_9353 0 0 1 7 5108402 5108423 mRNA hsa-miR-25 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108399 + 5108379 5108419 41 CTAAAACTGCACAAAACAGAACTATCTTAAGGCACATGTGC CTAAAACTGCACAAAACAGAACTATCTGAAGGCACATGTGC < 41bp 1 0.332228171089449 1 0.987038493156433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108399 chr7:5108406 . . 0 hm6A_associated_SNPs_9353 0 0 1 7 5108399 5108423 mRNA hsa-miR-32 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108399 + 5108379 5108419 41 CTAAAACTGCACAAAACAGAACTATCTTAAGGCACATGTGC CTAAAACTGCACAAAACAGAACTATCTGAAGGCACATGTGC < 41bp 1 0.332228171089449 1 0.987038493156433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108399 chr7:5108406 . . 0 hm6A_associated_SNPs_9353 0 0 1 7 5108402 5108423 mRNA hsa-miR-92a RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108399 + 5108379 5108419 41 CTAAAACTGCACAAAACAGAACTATCTTAAGGCACATGTGC CTAAAACTGCACAAAACAGAACTATCTGAAGGCACATGTGC < 41bp 1 0.332228171089449 1 0.987038493156433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108399 chr7:5108406 . . 0 hm6A_associated_SNPs_9353 0 0 1 7 5108401 5108423 mRNA hsa-miR-363 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108399 + 5108379 5108419 41 CTAAAACTGCACAAAACAGAACTATCTTAAGGCACATGTGC CTAAAACTGCACAAAACAGAACTATCTGAAGGCACATGTGC < 41bp 1 0.332228171089449 1 0.987038493156433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108399 chr7:5108406 . . 0 hm6A_associated_SNPs_9353 0 0 1 7 5108402 5108423 mRNA hsa-miR-367 RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108399 + 5108379 5108419 41 CTAAAACTGCACAAAACAGAACTATCTTAAGGCACATGTGC CTAAAACTGCACAAAACAGAACTATCTGAAGGCACATGTGC < 41bp 1 0.332228171089449 1 0.987038493156433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108399 chr7:5108406 . . 0 hm6A_associated_SNPs_9353 0 0 1 7 5108396 5108416 mRNA hsa-miR-455-5p RBAK miRanda miRanda
14034 chr7 5108406 5108406 1 + T G rs568699333 5108399 + 5108379 5108419 41 CTAAAACTGCACAAAACAGAACTATCTTAAGGCACATGTGC CTAAAACTGCACAAAACAGAACTATCTGAAGGCACATGTGC < 41bp 1 0.332228171089449 1 0.987038493156433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108399 chr7:5108406 . . 0 hm6A_associated_SNPs_9353 0 0 1 7 5108402 5108423 mRNA hsa-miR-92b RBAK miRanda miRanda
14034 chr7 5108594 5108594 1 + C T rs115094175 5108602 + 5108582 5108622 41 AAATTATAAAGACGGGCAAAACTTGTATACGTGGTTTAAAA AAATTATAAAGATGGGCAAAACTTGTATACGTGGTTTAAAA < 41bp 1 0.311940521166594 1 0.409018367528915 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108602 chr7:5108594 . . 0 hm6A_associated_SNPs_9361 0 0 1 2 5108589 5108610 mRNA hsa-miR-381 RBAK miRanda miRanda
14034 chr7 5108594 5108594 1 + C T rs115094175 5108602 + 5108582 5108622 41 AAATTATAAAGACGGGCAAAACTTGTATACGTGGTTTAAAA AAATTATAAAGATGGGCAAAACTTGTATACGTGGTTTAAAA < 41bp 1 0.311940521166594 1 0.409018367528915 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108602 chr7:5108594 . . 0 hm6A_associated_SNPs_9361 0 0 1 2 5108589 5108610 mRNA hsa-miR-300 RBAK miRanda miRanda
14034 chr7 5108606 5108606 1 + G A rs77784629 5108602 + 5108582 5108622 41 AAATTATAAAGACGGGCAAAACTTGTATACGTGGTTTAAAA AAATTATAAAGACGGGCAAAACTTATATACGTGGTTTAAAA < 41bp 1 0.327884492548359 1 0.656931579113007 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 25 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108602 chr7:5108606 . . 0 hm6A_associated_SNPs_9362 0 0 1 3 5108589 5108610 mRNA hsa-miR-381 RBAK miRanda miRanda
14034 chr7 5108606 5108606 1 + G A rs77784629 5108602 + 5108582 5108622 41 AAATTATAAAGACGGGCAAAACTTGTATACGTGGTTTAAAA AAATTATAAAGACGGGCAAAACTTATATACGTGGTTTAAAA < 41bp 1 0.327884492548359 1 0.656931579113007 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 25 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108602 chr7:5108606 . . 0 hm6A_associated_SNPs_9362 0 0 1 3 5108600 5108625 mRNA hsa-miR-590-3p RBAK miRanda miRanda
14034 chr7 5108606 5108606 1 + G A rs77784629 5108602 + 5108582 5108622 41 AAATTATAAAGACGGGCAAAACTTGTATACGTGGTTTAAAA AAATTATAAAGACGGGCAAAACTTATATACGTGGTTTAAAA < 41bp 1 0.327884492548359 1 0.656931579113007 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 25 RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108602 chr7:5108606 . . 0 hm6A_associated_SNPs_9362 0 0 1 3 5108589 5108610 mRNA hsa-miR-300 RBAK miRanda miRanda
14034 chr7 6063457 6063457 1 - T C rs150073939 6063442 - 6063422 6063462 41 ATTACATGATGCTTTTATTGACACTTGACAACTGGCCTAAA ATTACGTGATGCTTTTATTGACACTTGACAACTGGCCTAAA < 41bp 1 0.468546130594063 1 0.99526447057724 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 AIMP2;EIF2AK1 ENSG00000086232;ENSG00000106305 UTR3 Human other chr7:6063442 chr7:6063457 . . 0 hm6A_associated_SNPs_9376 0 0 1 2 6063437 6063460 mRNA hsa-miR-301a EIF2AK1 miRanda miRanda
14034 chr7 6063457 6063457 1 - T C rs150073939 6063442 - 6063422 6063462 41 ATTACATGATGCTTTTATTGACACTTGACAACTGGCCTAAA ATTACGTGATGCTTTTATTGACACTTGACAACTGGCCTAAA < 41bp 1 0.468546130594063 1 0.99526447057724 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 AIMP2;EIF2AK1 ENSG00000086232;ENSG00000106305 UTR3 Human other chr7:6063442 chr7:6063457 . . 0 hm6A_associated_SNPs_9376 0 0 1 2 6063437 6063460 mRNA hsa-miR-301b EIF2AK1 miRanda miRanda
14034 chr7 6200399 6200399 1 + A G rs193182710 6200379 + 6200359 6200399 41 AACACTTTCTACCACTGCTGACCATTGTAAAATACCGTGTA AACACTTTCTACCACTGCTGACCATTGTAAAATACCGTGTG < 41bp 1 0.342489810738326 1 0.930624127388 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 USP42 ENSG00000106346 UTR3 Human protein_coding chr7:6200379 chr7:6200399 . . 0 hm6A_associated_SNPs_9385 0 0 1 1 6200388 6200409 mRNA hsa-miR-876-5p USP42 miRanda miRanda
14034 chr7 6200575 6200575 1 + A T rs554435551 6200556 + 6200536 6200576 41 TGGAATTGTCAAAAGTACAAACTGACAGTGTGTATATTTAA TGGAATTGTCAAAAGTACAAACTGACAGTGTGTATATTTTA < 41bp 1 0.555232381705433 1 0.980337977409363 experiment 0.889535236589135 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 USP42 ENSG00000106346 UTR3 Human protein_coding chr7:6200556 chr7:6200575 . . 0 hm6A_associated_SNPs_9386 0 0 1 1 6200569 6200589 mRNA hsa-miR-499-5p USP42 miRanda miRanda
14034 chr7 6200575 6200575 1 + A T rs554435551 6200560 + 6200540 6200580 41 ATTGTCAAAAGTACAAACTGACAGTGTGTATATTTAATTTA ATTGTCAAAAGTACAAACTGACAGTGTGTATATTTTATTTA < 41bp 1 0.762605178526829 1 0.977721214294434 experiment 0.474789642946341 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 36 USP42 ENSG00000106346 UTR3 Human protein_coding chr7:6200560 chr7:6200575 . . 0 hm6A_associated_SNPs_9387 0 0 1 1 6200569 6200589 mRNA hsa-miR-499-5p USP42 miRanda miRanda
14034 chr7 6200575 6200575 1 + A T rs554435551 6200584 + 6200564 6200604 41 TGTGTATATTTAATTTAAAGACTTATTTAAAAACTCACAAG TGTGTATATTTTATTTAAAGACTTATTTAAAAACTCACAAG < 41bp 1 0.392750563966947 1 0.994016647338867 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 USP42 ENSG00000106346 UTR3 Human protein_coding chr7:6200584 chr7:6200575 . . 0 hm6A_associated_SNPs_9388 0 0 1 1 6200569 6200589 mRNA hsa-miR-499-5p USP42 miRanda miRanda
14034 chr7 6442148 6442148 1 + A C rs1059223 6442168 + 6442148 6442188 41 AAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC CAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC < 41bp 1 0.708868686390897 1 0.962501466274261 experiment 0.582262627218206 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 1 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442168 chr7:6442148 . . 0 hm6A_associated_SNPs_9391 0 0 1 2 6442129 6442149 mRNA hsa-miR-129-5p RAC1 miRanda miRanda
14034 chr7 6442148 6442148 1 + A C rs1059223 6442168 + 6442148 6442188 41 AAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC CAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC < 41bp 1 0.708868686390897 1 0.962501466274261 experiment 0.582262627218206 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 1 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442168 chr7:6442148 . . 0 hm6A_associated_SNPs_9391 0 0 1 2 6442142 6442162 mRNA hsa-miR-129-5p RAC1 miRanda miRanda
14034 chr7 6442152 6442152 1 + A C rs35359875 6442168 + 6442148 6442188 41 AAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC AAAACAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC < 41bp 1 0.721090292600655 1 0.961791038513184 experiment 0.557819414798691 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 5 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442168 chr7:6442152 . . 0 hm6A_associated_SNPs_9392 0 0 1 1 6442142 6442162 mRNA hsa-miR-129-5p RAC1 miRanda miRanda
14034 chr7 6442156 6442156 1 + C A rs2303367 6442168 + 6442148 6442188 41 AAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC AAAAAAAAAAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC < 41bp 1 0.728369795860491 1 0.961912631988525 experiment 0.543260408279017 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 9 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442168 chr7:6442156 . . 0 hm6A_associated_SNPs_9393 0 0 1 1 6442142 6442162 mRNA hsa-miR-129-5p RAC1 miRanda miRanda
14034 chr7 6442160 6442160 1 + A C rs372877887 6442168 + 6442148 6442188 41 AAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC AAAAAAAACAAACAAAAAAAACAACGGTGGAGCCTTCGCAC < 41bp 1 0.717841147791066 1 0.963042974472046 experiment 0.564317704417869 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 13 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442168 chr7:6442160 . . 0 hm6A_associated_SNPs_9394 0 0 1 1 6442142 6442162 mRNA hsa-miR-129-5p RAC1 miRanda miRanda
14034 chr7 6442161 6442161 1 + A C rs560677179 6442168 + 6442148 6442188 41 AAAAAAAACAAAAAAAAAAAACAACGGTGGAGCCTTCGCAC AAAAAAAACAAAACAAAAAAACAACGGTGGAGCCTTCGCAC < 41bp 1 0.710405694751185 1 0.962608158588409 experiment 0.579188610497629 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 14 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442168 chr7:6442161 . . 0 hm6A_associated_SNPs_9395 0 0 1 1 6442142 6442162 mRNA hsa-miR-129-5p RAC1 miRanda miRanda
14034 chr7 6442481 6442481 1 + T G rs34625328 6442501 + 6442481 6442521 41 TCTGCAGTTAGGAGGTGCAGACACTTGCTCTCCTATGTAGT GCTGCAGTTAGGAGGTGCAGACACTTGCTCTCCTATGTAGT < 41bp 1 0.367896457666626 1 0.996114373207092 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442501 chr7:6442481 . . 0 hm6A_associated_SNPs_9398 0 0 1 1 6442480 6442503 mRNA hsa-miR-346 RAC1 miRanda miRanda
14034 chr7 6442532 6442532 1 + G A rs548626083 6442542 + 6442522 6442562 41 TCTCAGATGCGTAAAGCAGAACAGCCTCCCGAATGAAGCGT TCTCAGATGCATAAAGCAGAACAGCCTCCCGAATGAAGCGT < 41bp 1 0.314327171014717 1 0.97752970457077 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442542 chr7:6442532 . . 0 hm6A_associated_SNPs_9399 0 0 1 1 6442526 6442550 mRNA hsa-miR-485-5p RAC1 miRanda miRanda
14034 chr7 6442544 6442544 1 + A G rs836552 6442542 + 6442522 6442562 41 TCTCAGATGCGTAAAGCAGAACAGCCTCCCGAATGAAGCGT TCTCAGATGCGTAAAGCAGAACGGCCTCCCGAATGAAGCGT Direct Loss 1 0.250129899729582 1 0.977481484413147 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442542 chr7:6442544 . . 0 hm6A_associated_SNPs_9400 0 0 1 1 6442526 6442550 mRNA hsa-miR-485-5p RAC1 miRanda miRanda
14034 chr7 6443436 6443436 1 + A G rs14627 6443441 + 6443421 6443461 41 ACGATGTTCTGTACAACTTAACTCACTGGCGAGAATACAGC ACGATGTTCTGTACAGCTTAACTCACTGGCGAGAATACAGC < 41bp 1 0.248376488487671 1 0.908386528491974 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6443441 chr7:6443436 . . 0 hm6A_associated_SNPs_9402 0 0 1 1 6443419 6443440 mRNA hsa-miR-382 RAC1 miRanda miRanda
14034 chr7 6777171 6777171 1 + G A rs201513123 6777155 + 6777135 6777175 41 GGGGACAGGGGCTCGCAGGAACATGTGGACTCTCAGGAGAA GGGGACAGGGGCTCGCAGGAACATGTGGACTCTCAGAAGAA < 41bp 1 0.538695701196484 1 0.997740268707275 experiment 0.922608597607032 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6777155 chr7:6777171 . . 0 hm6A_associated_SNPs_9415 0 0 1 1 6777171 6777192 mRNA hsa-miR-223 PMS2CL miRanda miRanda
14034 chr7 6777171 6777171 1 + G A rs201513123 6777163 + 6777143 6777183 41 GGGCTCGCAGGAACATGTGGACTCTCAGGAGAAAGCGCCTG GGGCTCGCAGGAACATGTGGACTCTCAGAAGAAAGCGCCTG < 41bp 1 0.706682388986253 1 0.99934720993042 experiment 0.586635222027493 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 29 PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6777163 chr7:6777171 . . 0 hm6A_associated_SNPs_9416 0 0 1 1 6777171 6777192 mRNA hsa-miR-223 PMS2CL miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283497 + 7283477 7283517 41 AGAAACCTTTCACATGAATGACTATAAACTGAAGCTTTAAA AGAAACCTTTCACATGAATGACTAAAAACTGAAGCTTTAAA < 41bp 1 0.794954109924229 1 0.678256750106812 experiment 0.410091780151542 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283497 chr7:7283501 . . 0 hm6A_associated_SNPs_9420 0 0 1 5 7283489 7283510 mRNA hsa-miR-223 C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283497 + 7283477 7283517 41 AGAAACCTTTCACATGAATGACTATAAACTGAAGCTTTAAA AGAAACCTTTCACATGAATGACTAAAAACTGAAGCTTTAAA < 41bp 1 0.794954109924229 1 0.678256750106812 experiment 0.410091780151542 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283497 chr7:7283501 . . 0 hm6A_associated_SNPs_9420 0 0 1 5 7283493 7283515 mRNA hsa-miR-320a C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283497 + 7283477 7283517 41 AGAAACCTTTCACATGAATGACTATAAACTGAAGCTTTAAA AGAAACCTTTCACATGAATGACTAAAAACTGAAGCTTTAAA < 41bp 1 0.794954109924229 1 0.678256750106812 experiment 0.410091780151542 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283497 chr7:7283501 . . 0 hm6A_associated_SNPs_9420 0 0 1 5 7283493 7283515 mRNA hsa-miR-320b C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283497 + 7283477 7283517 41 AGAAACCTTTCACATGAATGACTATAAACTGAAGCTTTAAA AGAAACCTTTCACATGAATGACTAAAAACTGAAGCTTTAAA < 41bp 1 0.794954109924229 1 0.678256750106812 experiment 0.410091780151542 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283497 chr7:7283501 . . 0 hm6A_associated_SNPs_9420 0 0 1 5 7283495 7283515 mRNA hsa-miR-320c C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283497 + 7283477 7283517 41 AGAAACCTTTCACATGAATGACTATAAACTGAAGCTTTAAA AGAAACCTTTCACATGAATGACTAAAAACTGAAGCTTTAAA < 41bp 1 0.794954109924229 1 0.678256750106812 experiment 0.410091780151542 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283497 chr7:7283501 . . 0 hm6A_associated_SNPs_9420 0 0 1 5 7283496 7283515 mRNA hsa-miR-320d C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283504 + 7283484 7283524 41 TTTCACATGAATGACTATAAACTGAAGCTTTAAATGAGCTG TTTCACATGAATGACTAAAAACTGAAGCTTTAAATGAGCTG < 41bp 1 0.746286395046079 1 0.720840454101562 experiment 0.507427209907841 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 18 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283504 chr7:7283501 . . 0 hm6A_associated_SNPs_9421 0 0 1 5 7283489 7283510 mRNA hsa-miR-223 C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283504 + 7283484 7283524 41 TTTCACATGAATGACTATAAACTGAAGCTTTAAATGAGCTG TTTCACATGAATGACTAAAAACTGAAGCTTTAAATGAGCTG < 41bp 1 0.746286395046079 1 0.720840454101562 experiment 0.507427209907841 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 18 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283504 chr7:7283501 . . 0 hm6A_associated_SNPs_9421 0 0 1 5 7283493 7283515 mRNA hsa-miR-320a C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283504 + 7283484 7283524 41 TTTCACATGAATGACTATAAACTGAAGCTTTAAATGAGCTG TTTCACATGAATGACTAAAAACTGAAGCTTTAAATGAGCTG < 41bp 1 0.746286395046079 1 0.720840454101562 experiment 0.507427209907841 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 18 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283504 chr7:7283501 . . 0 hm6A_associated_SNPs_9421 0 0 1 5 7283493 7283515 mRNA hsa-miR-320b C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283504 + 7283484 7283524 41 TTTCACATGAATGACTATAAACTGAAGCTTTAAATGAGCTG TTTCACATGAATGACTAAAAACTGAAGCTTTAAATGAGCTG < 41bp 1 0.746286395046079 1 0.720840454101562 experiment 0.507427209907841 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 18 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283504 chr7:7283501 . . 0 hm6A_associated_SNPs_9421 0 0 1 5 7283495 7283515 mRNA hsa-miR-320c C1GALT1 miRanda miRanda
14034 chr7 7283501 7283501 1 + T A rs17165546 7283504 + 7283484 7283524 41 TTTCACATGAATGACTATAAACTGAAGCTTTAAATGAGCTG TTTCACATGAATGACTAAAAACTGAAGCTTTAAATGAGCTG < 41bp 1 0.746286395046079 1 0.720840454101562 experiment 0.507427209907841 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 18 C1GALT1 ENSG00000106392 UTR3 Human protein_coding chr7:7283504 chr7:7283501 . . 0 hm6A_associated_SNPs_9421 0 0 1 5 7283496 7283515 mRNA hsa-miR-320d C1GALT1 miRanda miRanda
14034 chr7 8127059 8127059 1 + T C rs71533390 8127057 + 8127037 8127077 41 AATAAAGTGTTCAGTACTGGACTGTACATAAACATTCCACA AATAAAGTGTTCAGTACTGGACCGTACATAAACATTCCACA < 41bp 1 0.214436999316382 1 0.90229743719101 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 GLCCI1 ENSG00000106415 UTR3 Human protein_coding chr7:8127057 chr7:8127059 . . 0 hm6A_associated_SNPs_9430 0 0 1 4 8127054 8127075 mRNA hsa-miR-1 GLCCI1 miRanda miRanda
14034 chr7 8127059 8127059 1 + T C rs71533390 8127057 + 8127037 8127077 41 AATAAAGTGTTCAGTACTGGACTGTACATAAACATTCCACA AATAAAGTGTTCAGTACTGGACCGTACATAAACATTCCACA < 41bp 1 0.214436999316382 1 0.90229743719101 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 GLCCI1 ENSG00000106415 UTR3 Human protein_coding chr7:8127057 chr7:8127059 . . 0 hm6A_associated_SNPs_9430 0 0 1 4 8127051 8127075 mRNA hsa-miR-206 GLCCI1 miRanda miRanda
14034 chr7 8127059 8127059 1 + T C rs71533390 8127057 + 8127037 8127077 41 AATAAAGTGTTCAGTACTGGACTGTACATAAACATTCCACA AATAAAGTGTTCAGTACTGGACCGTACATAAACATTCCACA < 41bp 1 0.214436999316382 1 0.90229743719101 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 GLCCI1 ENSG00000106415 UTR3 Human protein_coding chr7:8127057 chr7:8127059 . . 0 hm6A_associated_SNPs_9430 0 0 1 4 8127052 8127073 mRNA hsa-miR-590-3p GLCCI1 miRanda miRanda
14034 chr7 8127059 8127059 1 + T C rs71533390 8127057 + 8127037 8127077 41 AATAAAGTGTTCAGTACTGGACTGTACATAAACATTCCACA AATAAAGTGTTCAGTACTGGACCGTACATAAACATTCCACA < 41bp 1 0.214436999316382 1 0.90229743719101 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 GLCCI1 ENSG00000106415 UTR3 Human protein_coding chr7:8127057 chr7:8127059 . . 0 hm6A_associated_SNPs_9430 0 0 1 4 8127056 8127075 mRNA hsa-miR-613 GLCCI1 miRanda miRanda
14034 chr7 11143194 11143194 1 + C G rs180784176 11143176 + 11143156 11143196 41 ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTCTT ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTGTT < 41bp 1 0.0725194784143399 1 0.938833355903625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 PHF14 ENSG00000106443 UTR3 Human protein_coding chr7:11143176 chr7:11143194 . . 0 hm6A_associated_SNPs_9442 0 0 1 5 11143190 11143216 mRNA hsa-miR-19a PHF14 miRanda miRanda
14034 chr7 11143194 11143194 1 + C G rs180784176 11143176 + 11143156 11143196 41 ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTCTT ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTGTT < 41bp 1 0.0725194784143399 1 0.938833355903625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 PHF14 ENSG00000106443 UTR3 Human protein_coding chr7:11143176 chr7:11143194 . . 0 hm6A_associated_SNPs_9442 0 0 1 5 11143190 11143216 mRNA hsa-miR-19b PHF14 miRanda miRanda
14034 chr7 11143194 11143194 1 + C G rs180784176 11143176 + 11143156 11143196 41 ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTCTT ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTGTT < 41bp 1 0.0725194784143399 1 0.938833355903625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 PHF14 ENSG00000106443 UTR3 Human protein_coding chr7:11143176 chr7:11143194 . . 0 hm6A_associated_SNPs_9442 0 0 1 5 11143193 11143217 mRNA hsa-miR-301a PHF14 miRanda miRanda
14034 chr7 11143194 11143194 1 + C G rs180784176 11143176 + 11143156 11143196 41 ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTCTT ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTGTT < 41bp 1 0.0725194784143399 1 0.938833355903625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 PHF14 ENSG00000106443 UTR3 Human protein_coding chr7:11143176 chr7:11143194 . . 0 hm6A_associated_SNPs_9442 0 0 1 5 11143194 11143218 mRNA hsa-miR-373 PHF14 miRanda miRanda
14034 chr7 11143194 11143194 1 + C G rs180784176 11143176 + 11143156 11143196 41 ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTCTT ATTTCATCACTCAATCTTGAACTGATTTAGAAGAGACTGTT < 41bp 1 0.0725194784143399 1 0.938833355903625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 PHF14 ENSG00000106443 UTR3 Human protein_coding chr7:11143176 chr7:11143194 . . 0 hm6A_associated_SNPs_9442 0 0 1 5 11143193 11143217 mRNA hsa-miR-301b PHF14 miRanda miRanda
14034 chr7 11209087 11209087 1 + C T rs117444431 11209096 + 11209076 11209116 41 TCTCAGGAGCTCAACATGGAACAGAAAAATCCAAAGAAATA TCTCAGGAGCTTAACATGGAACAGAAAAATCCAAAGAAATA < 41bp 1 0.379686892712817 1 0.929160177707672 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 PHF14;THSD7A ENSG00000106443 CDS Human protein_coding chr7:11209096 chr7:11209087 synonymous SNV . 0 hm6A_associated_SNPs_9443 0 0 1 1 11209087 11209108 mRNA hsa-miR-876-5p PHF14 miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729244 12729269 mRNA hsa-miR-17 ARL4A miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729246 12729269 mRNA hsa-miR-20a ARL4A miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729246 12729269 mRNA hsa-miR-93 ARL4A miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729244 12729269 mRNA hsa-miR-106a ARL4A miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729249 12729271 mRNA hsa-miR-203 ARL4A miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729246 12729269 mRNA hsa-miR-106b ARL4A miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729246 12729269 mRNA hsa-miR-20b ARL4A miRanda miRanda
14034 chr7 12729269 12729269 1 + C A rs1058268 12729279 + 12729259 12729299 41 GAAGCACTTTCACTTGAAGAACCTAAAATGATTGACTCATT GAAGCACTTTAACTTGAAGAACCTAAAATGATTGACTCATT < 41bp 1 0.0308855894267743 1 0.817995250225067 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729279 chr7:12729269 . . 0 hm6A_associated_SNPs_9452 0 0 1 8 12729248 12729269 mRNA hsa-miR-519d ARL4A miRanda miRanda
14034 chr7 12729444 12729444 1 + T C rs539569536 12729458 + 12729438 12729478 41 TTAATATTTGCTGGCTAAAAACAAATGTGGTTTTTATATAT TTAATACTTGCTGGCTAAAAACAAATGTGGTTTTTATATAT < 41bp 1 0.108461185229351 1 0.354983389377594 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729458 chr7:12729444 . . 0 hm6A_associated_SNPs_9453 0 0 1 3 12729432 12729454 mRNA hsa-miR-15a ARL4A miRanda miRanda
14034 chr7 12729444 12729444 1 + T C rs539569536 12729458 + 12729438 12729478 41 TTAATATTTGCTGGCTAAAAACAAATGTGGTTTTTATATAT TTAATACTTGCTGGCTAAAAACAAATGTGGTTTTTATATAT < 41bp 1 0.108461185229351 1 0.354983389377594 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729458 chr7:12729444 . . 0 hm6A_associated_SNPs_9453 0 0 1 3 12729423 12729444 mRNA hsa-miR-374a ARL4A miRanda miRanda
14034 chr7 12729444 12729444 1 + T C rs539569536 12729458 + 12729438 12729478 41 TTAATATTTGCTGGCTAAAAACAAATGTGGTTTTTATATAT TTAATACTTGCTGGCTAAAAACAAATGTGGTTTTTATATAT < 41bp 1 0.108461185229351 1 0.354983389377594 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 ARL4A ENSG00000122644 UTR3 Human protein_coding chr7:12729458 chr7:12729444 . . 0 hm6A_associated_SNPs_9453 0 0 1 3 12729431 12729452 mRNA hsa-miR-338-3p ARL4A miRanda miRanda
14034 chr7 16823415 16823415 1 + A G rs149670076 16823408 + 16823388 16823428 41 GCATTTTTACCTGCAGAAAAACTTTGTATGGTACCACTGTG GCATTTTTACCTGCAGAAAAACTTTGTGTGGTACCACTGTG < 41bp 1 0.569943901097562 1 0.882166147232056 experiment 0.860112197804877 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823408 chr7:16823415 . . 0 hm6A_associated_SNPs_9455 0 0 1 1 16823408 16823429 mRNA hsa-miR-128 TSPAN13 miRanda miRanda
14034 chr7 16823978 16823978 1 + T G rs6616 16823993 + 16823973 16824013 41 TGAAATTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA TGAAAGTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA < 41bp 1 0.26084387858822 1 0.38789889216423 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 6 TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823993 chr7:16823978 . . 0 hm6A_associated_SNPs_9456 0 0 1 5 16823967 16823990 mRNA hsa-miR-200b TSPAN13 miRanda miRanda
14034 chr7 16823978 16823978 1 + T G rs6616 16823993 + 16823973 16824013 41 TGAAATTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA TGAAAGTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA < 41bp 1 0.26084387858822 1 0.38789889216423 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 6 TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823993 chr7:16823978 . . 0 hm6A_associated_SNPs_9456 0 0 1 5 16823969 16823990 mRNA hsa-miR-200c TSPAN13 miRanda miRanda
14034 chr7 16823978 16823978 1 + T G rs6616 16823993 + 16823973 16824013 41 TGAAATTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA TGAAAGTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA < 41bp 1 0.26084387858822 1 0.38789889216423 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 6 TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823993 chr7:16823978 . . 0 hm6A_associated_SNPs_9456 0 0 1 5 16823978 16824003 mRNA hsa-miR-372 TSPAN13 miRanda miRanda
14034 chr7 16823978 16823978 1 + T G rs6616 16823993 + 16823973 16824013 41 TGAAATTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA TGAAAGTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA < 41bp 1 0.26084387858822 1 0.38789889216423 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 6 TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823993 chr7:16823978 . . 0 hm6A_associated_SNPs_9456 0 0 1 5 16823963 16823990 mRNA hsa-miR-429 TSPAN13 miRanda miRanda
14034 chr7 16823978 16823978 1 + T G rs6616 16823993 + 16823973 16824013 41 TGAAATTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA TGAAAGTTCTCAGTATTGTAACAGCAACTTGTCAAACCTAA < 41bp 1 0.26084387858822 1 0.38789889216423 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 6 TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823993 chr7:16823978 . . 0 hm6A_associated_SNPs_9456 0 0 1 5 16823964 16823984 mRNA hsa-miR-539 TSPAN13 miRanda miRanda
14034 chr7 17382764 17382764 1 + T G rs536411430 17382756 + 17382736 17382776 41 AAGGATTATGGAAAAATAAAACTGTCACTGTTGGACGTCAG AAGGATTATGGAAAAATAAAACTGTCACGGTTGGACGTCAG < 41bp 1 0.789468084070879 1 0.797753989696503 experiment 0.421063831858242 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 29 AHR ENSG00000106546 UTR3 Human protein_coding chr7:17382756 chr7:17382764 . . 0 hm6A_associated_SNPs_9459 0 0 1 1 17382743 17382764 mRNA hsa-miR-542-3p AHR miRanda miRanda
14034 chr7 20452252 20452252 1 + C T rs115045587 20452235 + 20452215 20452255 41 GGCTGTTACCATAGGAAGGGACAAACTTCCTTGTAGGCAAC GGCTGTTACCATAGGAAGGGACAAACTTCCTTGTAGGTAAC < 41bp 1 0.119603430920774 1 0.0821202397346497 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 38 ITGB8 ENSG00000105855 UTR3 Human protein_coding chr7:20452235 chr7:20452252 . . 0 hm6A_associated_SNPs_9462 0 0 1 2 20452240 20452264 mRNA hsa-miR-141 ITGB8 miRanda miRanda
14034 chr7 20452252 20452252 1 + C T rs115045587 20452235 + 20452215 20452255 41 GGCTGTTACCATAGGAAGGGACAAACTTCCTTGTAGGCAAC GGCTGTTACCATAGGAAGGGACAAACTTCCTTGTAGGTAAC < 41bp 1 0.119603430920774 1 0.0821202397346497 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 38 ITGB8 ENSG00000105855 UTR3 Human protein_coding chr7:20452235 chr7:20452252 . . 0 hm6A_associated_SNPs_9462 0 0 1 2 20452242 20452264 mRNA hsa-miR-200a ITGB8 miRanda miRanda
14034 chr7 23214815 23214815 1 + A T rs557309443 23214813 + 23214793 23214833 41 ATTCTTTTCCCTTAGCCAAAACATGAAATATTTAACCTAGT ATTCTTTTCCCTTAGCCAAAACTTGAAATATTTAACCTAGT < 41bp 1 0.105528785908191 1 0.001008540391922 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 KLHL7 ENSG00000122550 UTR3 Human protein_coding chr7:23214813 chr7:23214815 . . 0 hm6A_associated_SNPs_9467 1 0 0 1 23214810 23214831 mRNA hsa-miR-154 KLHL7 miRanda miRanda
14034 chr7 23221750 23221750 1 + G C rs368129535 23221767 + 23221747 23221787 41 GGAGATCGGTGCTGGAACGAACATCCCGGTGCTAGGGGTGC GGACATCGGTGCTGGAACGAACATCCCGGTGCTAGGGGTGC < 41bp 1 0.710770498235352 1 0.998190760612488 experiment 0.578459003529295 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221767 chr7:23221750 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_9468 0 0 1 3 23221737 23221760 mRNA hsa-miR-29a NUPL2 miRanda miRanda
14034 chr7 23221750 23221750 1 + G C rs368129535 23221767 + 23221747 23221787 41 GGAGATCGGTGCTGGAACGAACATCCCGGTGCTAGGGGTGC GGACATCGGTGCTGGAACGAACATCCCGGTGCTAGGGGTGC < 41bp 1 0.710770498235352 1 0.998190760612488 experiment 0.578459003529295 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221767 chr7:23221750 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_9468 0 0 1 3 23221736 23221760 mRNA hsa-miR-29b NUPL2 miRanda miRanda
14034 chr7 23221750 23221750 1 + G C rs368129535 23221767 + 23221747 23221787 41 GGAGATCGGTGCTGGAACGAACATCCCGGTGCTAGGGGTGC GGACATCGGTGCTGGAACGAACATCCCGGTGCTAGGGGTGC < 41bp 1 0.710770498235352 1 0.998190760612488 experiment 0.578459003529295 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221767 chr7:23221750 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_9468 0 0 1 3 23221737 23221760 mRNA hsa-miR-29c NUPL2 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606886 29606907 mRNA hsa-miR-148a PRR15 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606882 29606906 mRNA hsa-miR-130a PRR15 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606887 29606907 mRNA hsa-miR-152 PRR15 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606884 29606906 mRNA hsa-miR-301a PRR15 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606885 29606906 mRNA hsa-miR-130b PRR15 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606886 29606907 mRNA hsa-miR-148b PRR15 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606884 29606906 mRNA hsa-miR-454 PRR15 miRanda miRanda
14034 chr7 29606889 29606889 1 + A C rs182134526 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTCTTAAAACCCTTGCACTG < 41bp 1 0.0799774463903268 1 0.915984272956848 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606889 . . 0 hm6A_associated_SNPs_9496 0 0 0 8 29606884 29606906 mRNA hsa-miR-301b PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606886 29606907 mRNA hsa-miR-148a PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606882 29606906 mRNA hsa-miR-130a PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606887 29606907 mRNA hsa-miR-152 PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606884 29606906 mRNA hsa-miR-301a PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606885 29606906 mRNA hsa-miR-130b PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606886 29606907 mRNA hsa-miR-148b PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606884 29606906 mRNA hsa-miR-454 PRR15 miRanda miRanda
14034 chr7 29606896 29606896 1 + C T rs3178052 29606886 + 29606866 29606906 41 TACAGCCTATTTTAGTGTGGACTATTAAAACCCTTGCACTG TACAGCCTATTTTAGTGTGGACTATTAAAATCCTTGCACTG < 41bp 1 0.0737800498074686 1 0.912314057350159 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 PRR15 ENSG00000176532 UTR3 Human protein_coding chr7:29606886 chr7:29606896 . . 0 hm6A_associated_SNPs_9497 0 0 0 8 29606884 29606906 mRNA hsa-miR-301b PRR15 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197235 30197257 mRNA hsa-miR-302a C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197232 30197257 mRNA hsa-miR-302b C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197233 30197257 mRNA hsa-miR-302c C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197235 30197257 mRNA hsa-miR-302d C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197232 30197257 mRNA hsa-miR-372 C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197235 30197257 mRNA hsa-miR-373 C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197237 30197257 mRNA hsa-miR-520e C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197236 30197257 mRNA hsa-miR-520a-3p C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197237 30197257 mRNA hsa-miR-520b C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197236 30197257 mRNA hsa-miR-520c-3p C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197236 30197257 mRNA hsa-miR-520d-3p C7orf41 miRanda miRanda
14034 chr7 30197257 30197257 1 + C T rs575688021 30197266 + 30197246 30197286 41 CATTAGCACTTCGAAATAGGACATCTGGCTCCCAGCATCCA CATTAGCACTTTGAAATAGGACATCTGGCTCCCAGCATCCA < 41bp 1 0.569139404206468 1 0.957410335540771 experiment 0.861721191587064 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MTURN ENSG00000251660 ncRNA_intronic Human sense_overlapping chr7:30197266 chr7:30197257 . . 0 hm6A_associated_SNPs_9500 0 0 1 12 30197243 30197257 mRNA hsa-miR-302e C7orf41 miRanda miRanda
14034 chr7 30405784 30405784 1 + G A rs79934850 30405800 + 30405780 30405820 41 AATCGTACTGGGGTAAAAAAACCCTGCTGAAGAGAGGACAG AATCATACTGGGGTAAAAAAACCCTGCTGAAGAGAGGACAG < 41bp 1 0.667197734194776 1 0.947638154029846 experiment 0.665604531610447 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 ZNRF2 ENSG00000180233 UTR3 Human protein_coding chr7:30405800 chr7:30405784 . . 0 hm6A_associated_SNPs_9507 0 0 1 1 30405764 30405784 mRNA hsa-miR-219-5p ZNRF2 miRanda miRanda
14034 chr7 30405851 30405851 1 + A G rs74689925 30405845 + 30405825 30405865 41 CACAGAACTCAGTGTACCAAACATGCATACAAAGGACACAC CACAGAACTCAGTGTACCAAACATGCGTACAAAGGACACAC < 41bp 1 0.797248371729946 1 0.983551383018494 experiment 0.405503256540108 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 ZNRF2 ENSG00000180233 UTR3 Human protein_coding chr7:30405845 chr7:30405851 . . 0 hm6A_associated_SNPs_9509 0 0 1 1 30405848 30405870 mRNA hsa-miR-339-5p ZNRF2 miRanda miRanda
14034 chr7 30405908 30405908 1 + A G rs192666620 30405925 + 30405905 30405945 41 TACATAGGTAATACTGATAAACATTTTGTATTCAGACGCCA TACGTAGGTAATACTGATAAACATTTTGTATTCAGACGCCA < 41bp 1 0.750780215513705 1 0.632807374000549 experiment 0.498439568972591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 ZNRF2 ENSG00000180233 UTR3 Human protein_coding chr7:30405925 chr7:30405908 . . 0 hm6A_associated_SNPs_9510 0 0 1 4 30405903 30405922 mRNA hsa-miR-144 ZNRF2 miRanda miRanda
14034 chr7 30405908 30405908 1 + A G rs192666620 30405925 + 30405905 30405945 41 TACATAGGTAATACTGATAAACATTTTGTATTCAGACGCCA TACGTAGGTAATACTGATAAACATTTTGTATTCAGACGCCA < 41bp 1 0.750780215513705 1 0.632807374000549 experiment 0.498439568972591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 ZNRF2 ENSG00000180233 UTR3 Human protein_coding chr7:30405925 chr7:30405908 . . 0 hm6A_associated_SNPs_9510 0 0 1 4 30405903 30405924 mRNA hsa-miR-361-5p ZNRF2 miRanda miRanda
14034 chr7 30405908 30405908 1 + A G rs192666620 30405925 + 30405905 30405945 41 TACATAGGTAATACTGATAAACATTTTGTATTCAGACGCCA TACGTAGGTAATACTGATAAACATTTTGTATTCAGACGCCA < 41bp 1 0.750780215513705 1 0.632807374000549 experiment 0.498439568972591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 ZNRF2 ENSG00000180233 UTR3 Human protein_coding chr7:30405925 chr7:30405908 . . 0 hm6A_associated_SNPs_9510 0 0 1 4 30405900 30405921 mRNA hsa-miR-496 ZNRF2 miRanda miRanda
14034 chr7 30405908 30405908 1 + A G rs192666620 30405925 + 30405905 30405945 41 TACATAGGTAATACTGATAAACATTTTGTATTCAGACGCCA TACGTAGGTAATACTGATAAACATTTTGTATTCAGACGCCA < 41bp 1 0.750780215513705 1 0.632807374000549 experiment 0.498439568972591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 ZNRF2 ENSG00000180233 UTR3 Human protein_coding chr7:30405925 chr7:30405908 . . 0 hm6A_associated_SNPs_9510 0 0 1 4 30405907 30405930 mRNA hsa-miR-590-3p ZNRF2 miRanda miRanda
14034 chr7 30411220 30411220 1 + A G rs73687838 30411215 + 30411195 30411235 41 TATCTGTCCAAGATTGAAGAACTCCAGGGTCAACTGCAATA TATCTGTCCAAGATTGAAGAACTCCGGGGTCAACTGCAATA < 41bp 1 0.756317564890277 1 0.986351847648621 experiment 0.487364870219445 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 DKFZP586I1420 ENSG00000235859 ncRNA_exonic Human processed_pseudogene chr7:30411215 chr7:30411220 . . 0 hm6A_associated_SNPs_9513 0 0 1 2 30411201 30411224 mRNA hsa-miR-125a-5p DKFZP586I1420 miRanda miRanda
14034 chr7 30411220 30411220 1 + A G rs73687838 30411215 + 30411195 30411235 41 TATCTGTCCAAGATTGAAGAACTCCAGGGTCAACTGCAATA TATCTGTCCAAGATTGAAGAACTCCGGGGTCAACTGCAATA < 41bp 1 0.756317564890277 1 0.986351847648621 experiment 0.487364870219445 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 DKFZP586I1420 ENSG00000235859 ncRNA_exonic Human processed_pseudogene chr7:30411215 chr7:30411220 . . 0 hm6A_associated_SNPs_9513 0 0 1 2 30411202 30411226 mRNA hsa-miR-504 DKFZP586I1420 miRanda miRanda
14034 chr7 30411222 30411222 1 + G C rs189447786 30411215 + 30411195 30411235 41 TATCTGTCCAAGATTGAAGAACTCCAGGGTCAACTGCAATA TATCTGTCCAAGATTGAAGAACTCCAGCGTCAACTGCAATA < 41bp 1 0.742133010464885 1 0.991212129592896 experiment 0.515733979070229 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 DKFZP586I1420 ENSG00000235859 ncRNA_exonic Human processed_pseudogene chr7:30411215 chr7:30411222 . . 0 hm6A_associated_SNPs_9514 0 0 1 2 30411201 30411224 mRNA hsa-miR-125a-5p DKFZP586I1420 miRanda miRanda
14034 chr7 30411222 30411222 1 + G C rs189447786 30411215 + 30411195 30411235 41 TATCTGTCCAAGATTGAAGAACTCCAGGGTCAACTGCAATA TATCTGTCCAAGATTGAAGAACTCCAGCGTCAACTGCAATA < 41bp 1 0.742133010464885 1 0.991212129592896 experiment 0.515733979070229 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 DKFZP586I1420 ENSG00000235859 ncRNA_exonic Human processed_pseudogene chr7:30411215 chr7:30411222 . . 0 hm6A_associated_SNPs_9514 0 0 1 2 30411202 30411226 mRNA hsa-miR-504 DKFZP586I1420 miRanda miRanda
14034 chr7 30673543 30673543 1 + C G rs142498676 30673527 + 30673507 30673547 41 GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCACTTTA GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCAGTTTA < 41bp 1 0.471595199306313 1 0.734923124313354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 37 GARS ENSG00000106105 UTR3 Human protein_coding chr7:30673527 chr7:30673543 . . 0 hm6A_associated_SNPs_9524 3 0 1 7 30673525 30673547 mRNA hsa-miR-17 GARS miRanda miRanda
14034 chr7 30673543 30673543 1 + C G rs142498676 30673527 + 30673507 30673547 41 GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCACTTTA GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCAGTTTA < 41bp 1 0.471595199306313 1 0.734923124313354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 37 GARS ENSG00000106105 UTR3 Human protein_coding chr7:30673527 chr7:30673543 . . 0 hm6A_associated_SNPs_9524 3 0 1 7 30673524 30673547 mRNA hsa-miR-20a GARS miRanda miRanda
14034 chr7 30673543 30673543 1 + C G rs142498676 30673527 + 30673507 30673547 41 GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCACTTTA GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCAGTTTA < 41bp 1 0.471595199306313 1 0.734923124313354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 37 GARS ENSG00000106105 UTR3 Human protein_coding chr7:30673527 chr7:30673543 . . 0 hm6A_associated_SNPs_9524 3 0 1 7 30673525 30673547 mRNA hsa-miR-93 GARS miRanda miRanda
14034 chr7 30673543 30673543 1 + C G rs142498676 30673527 + 30673507 30673547 41 GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCACTTTA GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCAGTTTA < 41bp 1 0.471595199306313 1 0.734923124313354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 37 GARS ENSG00000106105 UTR3 Human protein_coding chr7:30673527 chr7:30673543 . . 0 hm6A_associated_SNPs_9524 3 0 1 7 30673525 30673547 mRNA hsa-miR-106a GARS miRanda miRanda
14034 chr7 30673543 30673543 1 + C G rs142498676 30673527 + 30673507 30673547 41 GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCACTTTA GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCAGTTTA < 41bp 1 0.471595199306313 1 0.734923124313354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 37 GARS ENSG00000106105 UTR3 Human protein_coding chr7:30673527 chr7:30673543 . . 0 hm6A_associated_SNPs_9524 3 0 1 7 30673527 30673547 mRNA hsa-miR-106b GARS miRanda miRanda
14034 chr7 30673543 30673543 1 + C G rs142498676 30673527 + 30673507 30673547 41 GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCACTTTA GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCAGTTTA < 41bp 1 0.471595199306313 1 0.734923124313354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 37 GARS ENSG00000106105 UTR3 Human protein_coding chr7:30673527 chr7:30673543 . . 0 hm6A_associated_SNPs_9524 3 0 1 7 30673524 30673547 mRNA hsa-miR-20b GARS miRanda miRanda
14034 chr7 30673543 30673543 1 + C G rs142498676 30673527 + 30673507 30673547 41 GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCACTTTA GCTAATAAAAAAAAAAAAAAACTACTCTTATGTCCAGTTTA < 41bp 1 0.471595199306313 1 0.734923124313354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 37 GARS ENSG00000106105 UTR3 Human protein_coding chr7:30673527 chr7:30673543 . . 0 hm6A_associated_SNPs_9524 3 0 1 7 30673526 30673547 mRNA hsa-miR-519d GARS miRanda miRanda
14034 chr7 30964578 30964578 1 + C A rs28362743 30964565 + 30964545 30964585 41 GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCA GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATAAGGATCA < 41bp 1 0.101942171702821 1 0.541765809059143 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 34 AQP1 ENSG00000240583 UTR3 Human protein_coding chr7:30964565 chr7:30964578 . . 0 hm6A_associated_SNPs_9529 0 0 1 4 30964569 30964591 mRNA hsa-miR-320a AQP1 miRanda miRanda
14034 chr7 30964578 30964578 1 + C A rs28362743 30964565 + 30964545 30964585 41 GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCA GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATAAGGATCA < 41bp 1 0.101942171702821 1 0.541765809059143 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 34 AQP1 ENSG00000240583 UTR3 Human protein_coding chr7:30964565 chr7:30964578 . . 0 hm6A_associated_SNPs_9529 0 0 1 4 30964569 30964591 mRNA hsa-miR-320b AQP1 miRanda miRanda
14034 chr7 30964578 30964578 1 + C A rs28362743 30964565 + 30964545 30964585 41 GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCA GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATAAGGATCA < 41bp 1 0.101942171702821 1 0.541765809059143 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 34 AQP1 ENSG00000240583 UTR3 Human protein_coding chr7:30964565 chr7:30964578 . . 0 hm6A_associated_SNPs_9529 0 0 1 4 30964571 30964591 mRNA hsa-miR-320c AQP1 miRanda miRanda
14034 chr7 30964578 30964578 1 + C A rs28362743 30964565 + 30964545 30964585 41 GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCA GCTATAGTTGCAGCCCAAGGACAGTTCAGAGATAAGGATCA < 41bp 1 0.101942171702821 1 0.541765809059143 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 34 AQP1 ENSG00000240583 UTR3 Human protein_coding chr7:30964565 chr7:30964578 . . 0 hm6A_associated_SNPs_9529 0 0 1 4 30964572 30964591 mRNA hsa-miR-320d AQP1 miRanda miRanda
14034 chr7 35943952 35943952 1 + T A rs542660756 35943955 + 35943935 35943975 41 TTGCCAATATGCCAGCTTGGACATCAGTGTTTGTTGGATCC TTGCCAATATGCCAGCTAGGACATCAGTGTTTGTTGGATCC < 41bp 1 0.799524806091403 1 0.864226579666138 experiment 0.400950387817194 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control 18 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35943955 chr7:35943952 . . 0 hm6A_associated_SNPs_9536 0 0 1 3 35943946 35943966 mRNA hsa-miR-141 SEPT7 miRanda miRanda
14034 chr7 35943952 35943952 1 + T A rs542660756 35943955 + 35943935 35943975 41 TTGCCAATATGCCAGCTTGGACATCAGTGTTTGTTGGATCC TTGCCAATATGCCAGCTAGGACATCAGTGTTTGTTGGATCC < 41bp 1 0.799524806091403 1 0.864226579666138 experiment 0.400950387817194 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control 18 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35943955 chr7:35943952 . . 0 hm6A_associated_SNPs_9536 0 0 1 3 35943946 35943966 mRNA hsa-miR-200a SEPT7 miRanda miRanda
14034 chr7 35943952 35943952 1 + T A rs542660756 35943955 + 35943935 35943975 41 TTGCCAATATGCCAGCTTGGACATCAGTGTTTGTTGGATCC TTGCCAATATGCCAGCTAGGACATCAGTGTTTGTTGGATCC < 41bp 1 0.799524806091403 1 0.864226579666138 experiment 0.400950387817194 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control 18 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35943955 chr7:35943952 . . 0 hm6A_associated_SNPs_9536 0 0 1 3 35943948 35943970 mRNA hsa-miR-495 SEPT7 miRanda miRanda
14034 chr7 35944757 35944757 1 + C G rs150305906 35944745 + 35944725 35944765 41 GCAAAATTGTGAAGCTAATGACCAACCTGTTTCTACCTATA GCAAAATTGTGAAGCTAATGACCAACCTGTTTGTACCTATA < 41bp 1 0.186744147860476 1 0.00130978226661682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35944745 chr7:35944757 . . 0 hm6A_associated_SNPs_9537 0 0 0 5 35944742 35944763 mRNA hsa-miR-196a SEPT7 miRanda miRanda
14034 chr7 35944757 35944757 1 + C G rs150305906 35944745 + 35944725 35944765 41 GCAAAATTGTGAAGCTAATGACCAACCTGTTTCTACCTATA GCAAAATTGTGAAGCTAATGACCAACCTGTTTGTACCTATA < 41bp 1 0.186744147860476 1 0.00130978226661682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35944745 chr7:35944757 . . 0 hm6A_associated_SNPs_9537 0 0 0 5 35944745 35944772 mRNA hsa-miR-217 SEPT7 miRanda miRanda
14034 chr7 35944757 35944757 1 + C G rs150305906 35944745 + 35944725 35944765 41 GCAAAATTGTGAAGCTAATGACCAACCTGTTTCTACCTATA GCAAAATTGTGAAGCTAATGACCAACCTGTTTGTACCTATA < 41bp 1 0.186744147860476 1 0.00130978226661682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35944745 chr7:35944757 . . 0 hm6A_associated_SNPs_9537 0 0 0 5 35944742 35944762 mRNA hsa-miR-379 SEPT7 miRanda miRanda
14034 chr7 35944757 35944757 1 + C G rs150305906 35944745 + 35944725 35944765 41 GCAAAATTGTGAAGCTAATGACCAACCTGTTTCTACCTATA GCAAAATTGTGAAGCTAATGACCAACCTGTTTGTACCTATA < 41bp 1 0.186744147860476 1 0.00130978226661682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35944745 chr7:35944757 . . 0 hm6A_associated_SNPs_9537 0 0 0 5 35944742 35944763 mRNA hsa-miR-196b SEPT7 miRanda miRanda
14034 chr7 35944757 35944757 1 + C G rs150305906 35944745 + 35944725 35944765 41 GCAAAATTGTGAAGCTAATGACCAACCTGTTTCTACCTATA GCAAAATTGTGAAGCTAATGACCAACCTGTTTGTACCTATA < 41bp 1 0.186744147860476 1 0.00130978226661682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35944745 chr7:35944757 . . 0 hm6A_associated_SNPs_9537 0 0 0 5 35944747 35944770 mRNA hsa-miR-448 SEPT7 miRanda miRanda
14034 chr7 39747058 39747058 1 + A G rs144561732 39747048 + 39747028 39747068 41 AGCTACATTTTCAGAAGTTAACATCAAGCCATCAAACCTGG AGCTACATTTTCAGAAGTTAACATCAAGCCGTCAAACCTGG < 41bp 1 0.348778377422132 1 0.475252449512482 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 RALA ENSG00000006451 UTR3 Human protein_coding chr7:39747048 chr7:39747058 . . 0 hm6A_associated_SNPs_9558 0 0 1 2 39747036 39747060 mRNA hsa-miR-135a RALA miRanda miRanda
14034 chr7 39747058 39747058 1 + A G rs144561732 39747048 + 39747028 39747068 41 AGCTACATTTTCAGAAGTTAACATCAAGCCATCAAACCTGG AGCTACATTTTCAGAAGTTAACATCAAGCCGTCAAACCTGG < 41bp 1 0.348778377422132 1 0.475252449512482 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 RALA ENSG00000006451 UTR3 Human protein_coding chr7:39747048 chr7:39747058 . . 0 hm6A_associated_SNPs_9558 0 0 1 2 39747034 39747060 mRNA hsa-miR-135b RALA miRanda miRanda
14034 chr7 39747481 39747481 1 + A G rs150384457 39747486 + 39747466 39747506 41 GAATTCAAGTTACCAATGTAACACTGGCCAGCGGGCCCAGC GAATTCAAGTTACCAGTGTAACACTGGCCAGCGGGCCCAGC < 41bp 1 0.547083401527542 1 0.353682696819305 experiment 0.905833196944917 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 RALA ENSG00000006451 UTR3 Human protein_coding chr7:39747486 chr7:39747481 . . 0 hm6A_associated_SNPs_9559 0 0 1 2 39747470 39747493 mRNA hsa-miR-199a-5p RALA miRanda miRanda
14034 chr7 39747481 39747481 1 + A G rs150384457 39747486 + 39747466 39747506 41 GAATTCAAGTTACCAATGTAACACTGGCCAGCGGGCCCAGC GAATTCAAGTTACCAGTGTAACACTGGCCAGCGGGCCCAGC < 41bp 1 0.547083401527542 1 0.353682696819305 experiment 0.905833196944917 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 RALA ENSG00000006451 UTR3 Human protein_coding chr7:39747486 chr7:39747481 . . 0 hm6A_associated_SNPs_9559 0 0 1 2 39747471 39747493 mRNA hsa-miR-199b-5p RALA miRanda miRanda
14034 chr7 43664477 43664477 1 + T A rs15866 43664460 + 43664440 43664480 41 GAGCAATATTTCCCTTTAGAACTTCAAGATTTCTACATTGA GAGCAATATTTCCCTTTAGAACTTCAAGATTTCTACAATGA < 41bp 1 0.720354046618339 1 0.992272198200226 experiment 0.559291906763322 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43664460 chr7:43664477 . . 0 hm6A_associated_SNPs_9566 0 0 0 1 43664467 43664488 mRNA hsa-miR-543 STK17A miRanda miRanda
14034 chr7 43664483 43664483 1 + A G rs142415211 43664502 + 43664482 43664522 41 AATGTTAATATTATTTATGGACCTCTGGCCAAATGGTACAT AGTGTTAATATTATTTATGGACCTCTGGCCAAATGGTACAT < 41bp 1 0.589961839311087 1 0.993250012397766 experiment 0.820076321377827 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 2 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43664502 chr7:43664483 . . 0 hm6A_associated_SNPs_9567 0 0 1 1 43664467 43664488 mRNA hsa-miR-543 STK17A miRanda miRanda
14034 chr7 43666288 43666288 1 + C A rs7784009 43666285 + 43666265 43666305 41 AAAATAACCACTATTGAATGACACGTTTGTACTTGATGGAT AAAATAACCACTATTGAATGACAAGTTTGTACTTGATGGAT < 41bp 1 0.0940964601534547 1 0.689512848854065 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43666285 chr7:43666288 . . 0 hm6A_associated_SNPs_9571 0 0 1 3 43666280 43666301 mRNA hsa-miR-26a STK17A miRanda miRanda
14034 chr7 43666288 43666288 1 + C A rs7784009 43666285 + 43666265 43666305 41 AAAATAACCACTATTGAATGACACGTTTGTACTTGATGGAT AAAATAACCACTATTGAATGACAAGTTTGTACTTGATGGAT < 41bp 1 0.0940964601534547 1 0.689512848854065 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43666285 chr7:43666288 . . 0 hm6A_associated_SNPs_9571 0 0 1 3 43666281 43666301 mRNA hsa-miR-26b STK17A miRanda miRanda
14034 chr7 43666288 43666288 1 + C A rs7784009 43666285 + 43666265 43666305 41 AAAATAACCACTATTGAATGACACGTTTGTACTTGATGGAT AAAATAACCACTATTGAATGACAAGTTTGTACTTGATGGAT < 41bp 1 0.0940964601534547 1 0.689512848854065 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43666285 chr7:43666288 . . 0 hm6A_associated_SNPs_9571 0 0 1 3 43666285 43666301 mRNA hsa-miR-1297 STK17A miRanda miRanda
14034 chr7 43666299 43666299 1 + G C rs113820102 43666285 + 43666265 43666305 41 AAAATAACCACTATTGAATGACACGTTTGTACTTGATGGAT AAAATAACCACTATTGAATGACACGTTTGTACTTCATGGAT < 41bp 1 0.0757931766494913 1 0.618791878223419 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43666285 chr7:43666299 . . 0 hm6A_associated_SNPs_9572 0 0 1 4 43666280 43666301 mRNA hsa-miR-26a STK17A miRanda miRanda
14034 chr7 43666299 43666299 1 + G C rs113820102 43666285 + 43666265 43666305 41 AAAATAACCACTATTGAATGACACGTTTGTACTTGATGGAT AAAATAACCACTATTGAATGACACGTTTGTACTTCATGGAT < 41bp 1 0.0757931766494913 1 0.618791878223419 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43666285 chr7:43666299 . . 0 hm6A_associated_SNPs_9572 0 0 1 4 43666281 43666301 mRNA hsa-miR-26b STK17A miRanda miRanda
14034 chr7 43666299 43666299 1 + G C rs113820102 43666285 + 43666265 43666305 41 AAAATAACCACTATTGAATGACACGTTTGTACTTGATGGAT AAAATAACCACTATTGAATGACACGTTTGTACTTCATGGAT < 41bp 1 0.0757931766494913 1 0.618791878223419 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43666285 chr7:43666299 . . 0 hm6A_associated_SNPs_9572 0 0 1 4 43666295 43666316 mRNA hsa-miR-758 STK17A miRanda miRanda
14034 chr7 43666299 43666299 1 + G C rs113820102 43666285 + 43666265 43666305 41 AAAATAACCACTATTGAATGACACGTTTGTACTTGATGGAT AAAATAACCACTATTGAATGACACGTTTGTACTTCATGGAT < 41bp 1 0.0757931766494913 1 0.618791878223419 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 STK17A ENSG00000164543 UTR3 Human protein_coding chr7:43666285 chr7:43666299 . . 0 hm6A_associated_SNPs_9572 0 0 1 4 43666285 43666301 mRNA hsa-miR-1297 STK17A miRanda miRanda
14034 chr7 44748451 44748451 1 + G A rs1058128 44748436 + 44748416 44748456 41 TCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTC TCTCCTTTAACCCAATGGAGACTTTCTGATGCATCATTTTC < 41bp 1 0.16798059101157 1 0.572754800319672 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 OGDH ENSG00000105953 UTR3 Human protein_coding chr7:44748436 chr7:44748451 . . 0 hm6A_associated_SNPs_9590 0 0 1 2 44748449 44748470 mRNA hsa-miR-96 OGDH miRanda miRanda
14034 chr7 44748451 44748451 1 + G A rs1058128 44748436 + 44748416 44748456 41 TCTCCTTTAACCCAATGGAGACTTTCTGATGCATCGTTTTC TCTCCTTTAACCCAATGGAGACTTTCTGATGCATCATTTTC < 41bp 1 0.16798059101157 1 0.572754800319672 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 OGDH ENSG00000105953 UTR3 Human protein_coding chr7:44748436 chr7:44748451 . . 0 hm6A_associated_SNPs_9590 0 0 1 2 44748451 44748470 mRNA hsa-miR-1271 OGDH miRanda miRanda
14034 chr7 44809430 44809430 1 + G A rs141306601 44809435 + 44809415 44809455 41 ACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGC ACGTGGGATGAAAAAACAAGACAGTTCATACAGTATGATGC < 41bp 1 0.172551335126503 1 0.820985972881317 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 16 ZMIZ2 ENSG00000122515 UTR3 Human protein_coding chr7:44809435 chr7:44809430 . . 0 hm6A_associated_SNPs_9592 0 0 1 1 44809417 44809437 mRNA hsa-miR-431 ZMIZ2 miRanda miRanda
14034 chr7 44809797 44809797 1 + C T rs138093735 44809787 + 44809767 44809807 41 CACAGGGAACGTTCTCCAGGACAGACCACACGTTAGTGCAC CACAGGGAACGTTCTCCAGGACAGACCACATGTTAGTGCAC < 41bp 1 0.099176119629667 1 0.468355268239975 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 ZMIZ2 ENSG00000122515 downstream Human protein_coding chr7:44809787 chr7:44809797 . . 0 hm6A_associated_SNPs_9594 0 0 0 1 44809787 44809810 mRNA hsa-miR-96 ZMIZ2 miRanda miRanda
14034 chr7 45077978 45077978 1 + G A rs2107732 45077992 + 45077972 45078012 41 GAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGA GAGCGCATCGAGCCAGACAGACTGCTGAGCGACTATATTGA < 41bp 1 0.324329048003539 1 0.954927086830139 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45077992 chr7:45077978 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_9596 1 1 1 1 45077966 45077988 mRNA hsa-miR-149 CCM2 miRanda miRanda
14034 chr7 55274084 55274084 1 + T C rs884225 55274073 + 55274053 55274093 41 TTCCATTCCATTGTTTTGAAACTCAGTATGCTGCCCCTGTC TTCCATTCCATTGTTTTGAAACTCAGTATGCCGCCCCTGTC < 41bp 1 0.0453942064250417 1 0.937593340873718 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 32 EGFR ENSG00000146648 UTR3 Human protein_coding chr7:55274073 chr7:55274084 . . 0 hm6A_associated_SNPs_9614 1 0 1 2 55274060 55274087 mRNA hsa-miR-103 EGFR miRanda miRanda
14034 chr7 55274084 55274084 1 + T C rs884225 55274073 + 55274053 55274093 41 TTCCATTCCATTGTTTTGAAACTCAGTATGCTGCCCCTGTC TTCCATTCCATTGTTTTGAAACTCAGTATGCCGCCCCTGTC < 41bp 1 0.0453942064250417 1 0.937593340873718 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 32 EGFR ENSG00000146648 UTR3 Human protein_coding chr7:55274073 chr7:55274084 . . 0 hm6A_associated_SNPs_9614 1 0 1 2 55274060 55274087 mRNA hsa-miR-107 EGFR miRanda miRanda
14034 chr7 56067016 56067016 1 + G C rs4689 56067011 + 56066991 56067031 41 GTTGTCCAGTATACCTTATAACACTGAGCCACTTCTCCCCA GTTGTCCAGTATACCTTATAACACTCAGCCACTTCTCCCCA < 41bp 1 0.544956619789811 1 0.855697989463806 experiment 0.910086760420378 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067011 chr7:56067016 . . 0 hm6A_associated_SNPs_9617 0 0 1 3 56066999 56067021 mRNA hsa-miR-24 GBAS miRanda miRanda
14034 chr7 56067016 56067016 1 + G C rs4689 56067011 + 56066991 56067031 41 GTTGTCCAGTATACCTTATAACACTGAGCCACTTCTCCCCA GTTGTCCAGTATACCTTATAACACTCAGCCACTTCTCCCCA < 41bp 1 0.544956619789811 1 0.855697989463806 experiment 0.910086760420378 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067011 chr7:56067016 . . 0 hm6A_associated_SNPs_9617 0 0 1 3 56067001 56067025 mRNA hsa-miR-373 GBAS miRanda miRanda
14034 chr7 56067016 56067016 1 + G C rs4689 56067011 + 56066991 56067031 41 GTTGTCCAGTATACCTTATAACACTGAGCCACTTCTCCCCA GTTGTCCAGTATACCTTATAACACTCAGCCACTTCTCCCCA < 41bp 1 0.544956619789811 1 0.855697989463806 experiment 0.910086760420378 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067011 chr7:56067016 . . 0 hm6A_associated_SNPs_9617 0 0 1 3 56067003 56067025 mRNA hsa-miR-520c-3p GBAS miRanda miRanda
14034 chr7 56067124 56067124 1 + A C rs2289062 56067132 + 56067112 56067152 41 TTACTAAAAAAAACCAAAAAACAAATCTGTTTTATAATCAC TTACTAAAAAAACCCAAAAAACAAATCTGTTTTATAATCAC < 41bp 1 0.525400133241078 1 0.804131865501404 experiment 0.949199733517845 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 13 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067132 chr7:56067124 . . 0 hm6A_associated_SNPs_9618 0 0 1 2 56067112 56067132 mRNA hsa-miR-129-5p GBAS miRanda miRanda
14034 chr7 56067124 56067124 1 + A C rs2289062 56067132 + 56067112 56067152 41 TTACTAAAAAAAACCAAAAAACAAATCTGTTTTATAATCAC TTACTAAAAAAACCCAAAAAACAAATCTGTTTTATAATCAC < 41bp 1 0.525400133241078 1 0.804131865501404 experiment 0.949199733517845 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 13 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067132 chr7:56067124 . . 0 hm6A_associated_SNPs_9618 0 0 1 2 56067109 56067131 mRNA hsa-miR-9 GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067441 56067465 mRNA hsa-miR-302a GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067441 56067465 mRNA hsa-miR-302b GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067440 56067465 mRNA hsa-miR-302c GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067440 56067465 mRNA hsa-miR-302d GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067448 56067465 mRNA hsa-miR-372 GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067445 56067465 mRNA hsa-miR-373 GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067445 56067465 mRNA hsa-miR-520e GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067444 56067465 mRNA hsa-miR-520a-3p GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067447 56067465 mRNA hsa-miR-520b GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067446 56067465 mRNA hsa-miR-520c-3p GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067445 56067465 mRNA hsa-miR-520d-3p GBAS miRanda miRanda
14034 chr7 56067456 56067456 1 + A G rs544279839 56067447 + 56067427 56067467 41 CATATGTGATTTTGAAATGAACACCTTGAATAGCACTAATT CATATGTGATTTTGAAATGAACACCTTGAGTAGCACTAATT < 41bp 1 0.563758802008591 1 0.0213553607463837 experiment 0.872482395982817 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067447 chr7:56067456 . . 0 hm6A_associated_SNPs_9619 0 0 1 12 56067448 56067465 mRNA hsa-miR-302e GBAS miRanda miRanda
14034 chr7 65224223 65224223 1 + T C rs149524925 65224218 + 65224198 65224238 41 TTTTGAGGACCTAAGTCCTGACTGCTTGAGACATGCAGGAC TTTTGAGGACCTAAGTCCTGACTGCCTGAGACATGCAGGAC < 41bp 1 0.121629470739994 1 0.00277349352836609 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224218 chr7:65224223 . . 0 hm6A_associated_SNPs_9643 0 0 1 2 65224222 65224245 mRNA hsa-miR-381 CCT6P1 miRanda miRanda
14034 chr7 65224223 65224223 1 + T C rs149524925 65224218 + 65224198 65224238 41 TTTTGAGGACCTAAGTCCTGACTGCTTGAGACATGCAGGAC TTTTGAGGACCTAAGTCCTGACTGCCTGAGACATGCAGGAC < 41bp 1 0.121629470739994 1 0.00277349352836609 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224218 chr7:65224223 . . 0 hm6A_associated_SNPs_9643 0 0 1 2 65224204 65224227 mRNA hsa-miR-421 CCT6P1 miRanda miRanda
14034 chr7 65224223 65224223 1 + T C rs149524925 65224228 + 65224208 65224248 41 CTAAGTCCTGACTGCTTGAGACATGCAGGACTTGTATATGA CTAAGTCCTGACTGCCTGAGACATGCAGGACTTGTATATGA < 41bp 1 0.375234016598625 1 0.00979989767074585 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224228 chr7:65224223 . . 0 hm6A_associated_SNPs_9644 0 0 1 2 65224222 65224245 mRNA hsa-miR-381 CCT6P1 miRanda miRanda
14034 chr7 65224223 65224223 1 + T C rs149524925 65224228 + 65224208 65224248 41 CTAAGTCCTGACTGCTTGAGACATGCAGGACTTGTATATGA CTAAGTCCTGACTGCCTGAGACATGCAGGACTTGTATATGA < 41bp 1 0.375234016598625 1 0.00979989767074585 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224228 chr7:65224223 . . 0 hm6A_associated_SNPs_9644 0 0 1 2 65224204 65224227 mRNA hsa-miR-421 CCT6P1 miRanda miRanda
14034 chr7 65619462 65619462 1 + T A rs184596184 65619442 + 65619422 65619462 41 TCTTGATGGATTTAGGGTTAACCTAGTTAATAATAAATTGT TCTTGATGGATTTAGGGTTAACCTAGTTAATAATAAATTGA < 41bp 1 0.04101044033407 1 0.00035664439201355 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619442 chr7:65619462 . . 0 hm6A_associated_SNPs_9656 0 0 1 1 65619450 65619472 mRNA hsa-miR-490-3p CRCP miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307809 72307832 mRNA hsa-miR-15a SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307811 72307832 mRNA hsa-miR-16 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307810 72307831 mRNA hsa-miR-103 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307810 72307831 mRNA hsa-miR-107 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307811 72307832 mRNA hsa-miR-15b SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307804 72307832 mRNA hsa-miR-195 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307810 72307832 mRNA hsa-miR-424 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307802 + 72307782 72307822 41 ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCGTTGAA ATATAGAAAAATTGTGTCGGACTTAAATAATTTTCATTGAA < 41bp 1 0.402598698256892 1 0.696077466011047 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307802 chr7:72307817 . . 0 hm6A_associated_SNPs_9672 0 0 1 8 72307812 72307832 mRNA hsa-miR-497 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307809 72307832 mRNA hsa-miR-15a SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307811 72307832 mRNA hsa-miR-16 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307810 72307831 mRNA hsa-miR-103 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307810 72307831 mRNA hsa-miR-107 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307811 72307832 mRNA hsa-miR-15b SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307804 72307832 mRNA hsa-miR-195 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307810 72307832 mRNA hsa-miR-424 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307822 + 72307802 72307842 41 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGAT ACTTAAATAATTTTCATTGAACATGCTGCCATAACTTAGAT < 41bp 1 0.367555690479368 1 0.257816821336746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307822 chr7:72307817 . . 0 hm6A_associated_SNPs_9673 0 0 1 8 72307812 72307832 mRNA hsa-miR-497 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307809 72307832 mRNA hsa-miR-15a SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307811 72307832 mRNA hsa-miR-16 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307810 72307831 mRNA hsa-miR-103 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307810 72307831 mRNA hsa-miR-107 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307811 72307832 mRNA hsa-miR-15b SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307804 72307832 mRNA hsa-miR-195 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307810 72307832 mRNA hsa-miR-424 SBDSP1 miRanda miRanda
14034 chr7 72307817 72307817 1 + G A rs709599 72307835 + 72307815 72307855 41 TCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA TCATTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAA < 41bp 1 0.124826430341707 1 0.0438607037067413 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72307835 chr7:72307817 . . 0 hm6A_associated_SNPs_9674 0 0 1 8 72307812 72307832 mRNA hsa-miR-497 SBDSP1 miRanda miRanda
14034 chr7 73107733 73107733 1 + C T rs79257360 73107717 + 73107697 73107737 41 CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAG CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCTAAAG < 41bp 1 0.186574855541675 1 0.0752460956573486 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107717 chr7:73107733 synonymous SNV . 0 hm6A_associated_SNPs_9681 0 0 1 3 73107714 73107736 mRNA hsa-miR-96 WBSCR22 miRanda miRanda
14034 chr7 73107733 73107733 1 + C T rs79257360 73107717 + 73107697 73107737 41 CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAG CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCTAAAG < 41bp 1 0.186574855541675 1 0.0752460956573486 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107717 chr7:73107733 synonymous SNV . 0 hm6A_associated_SNPs_9681 0 0 1 3 73107733 73107744 mRNA hsa-let-7i WBSCR22 miRanda miRanda
14034 chr7 73107733 73107733 1 + C T rs79257360 73107717 + 73107697 73107737 41 CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAG CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCTAAAG < 41bp 1 0.186574855541675 1 0.0752460956573486 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107717 chr7:73107733 synonymous SNV . 0 hm6A_associated_SNPs_9681 0 0 1 3 73107715 73107736 mRNA hsa-miR-1271 WBSCR22 miRanda miRanda
14034 chr7 73107733 73107733 1 + C T rs79257360 73107726 + 73107706 73107746 41 CATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT CATGGTGGTAGACTACCCTAACAGTGCTAAAGCAAAGAAGT < 41bp 1 0.514795327409324 1 0.0833026468753815 experiment 0.970409345181352 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 28 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107726 chr7:73107733 synonymous SNV . 0 hm6A_associated_SNPs_9682 0 0 1 3 73107714 73107736 mRNA hsa-miR-96 WBSCR22 miRanda miRanda
14034 chr7 73107733 73107733 1 + C T rs79257360 73107726 + 73107706 73107746 41 CATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT CATGGTGGTAGACTACCCTAACAGTGCTAAAGCAAAGAAGT < 41bp 1 0.514795327409324 1 0.0833026468753815 experiment 0.970409345181352 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 28 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107726 chr7:73107733 synonymous SNV . 0 hm6A_associated_SNPs_9682 0 0 1 3 73107733 73107744 mRNA hsa-let-7i WBSCR22 miRanda miRanda
14034 chr7 73107733 73107733 1 + C T rs79257360 73107726 + 73107706 73107746 41 CATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT CATGGTGGTAGACTACCCTAACAGTGCTAAAGCAAAGAAGT < 41bp 1 0.514795327409324 1 0.0833026468753815 experiment 0.970409345181352 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 28 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107726 chr7:73107733 synonymous SNV . 0 hm6A_associated_SNPs_9682 0 0 1 3 73107715 73107736 mRNA hsa-miR-1271 WBSCR22 miRanda miRanda
14034 chr7 73246278 73246278 1 + C A rs535008828 73246270 + 73246250 73246290 41 CGGGCCACTGGCTGCTGGGGACTGGGGACTGGGCAGAGACT CGGGCCACTGGCTGCTGGGGACTGGGGAATGGGCAGAGACT < 41bp 1 0.725777952303401 1 0.987110614776611 experiment 0.548444095393198 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 CLDN4 ENSG00000189143 UTR3 Human protein_coding chr7:73246270 chr7:73246278 . . 0 hm6A_associated_SNPs_9686 0 0 0 1 73246274 73246296 mRNA hsa-miR-24 CLDN4 miRanda miRanda
14034 chr7 73246278 73246278 1 + C A rs535008828 73246277 + 73246257 73246297 41 CTGGCTGCTGGGGACTGGGGACTGGGCAGAGACTGAGCCAG CTGGCTGCTGGGGACTGGGGAATGGGCAGAGACTGAGCCAG Direct Loss 1 0.76146451203266 1 0.965453624725342 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 CLDN4 ENSG00000189143 UTR3 Human protein_coding chr7:73246277 chr7:73246278 . . 0 hm6A_associated_SNPs_9687 0 0 0 1 73246274 73246296 mRNA hsa-miR-24 CLDN4 miRanda miRanda
14034 chr7 73246278 73246278 1 + C A rs535008828 73246288 + 73246268 73246308 41 GGACTGGGGACTGGGCAGAGACTGAGCCAGGCAGGAAGGCA GGACTGGGGAATGGGCAGAGACTGAGCCAGGCAGGAAGGCA < 41bp 1 0.703911080557219 1 0.977296829223633 experiment 0.592177838885561 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 CLDN4 ENSG00000189143 UTR3 Human protein_coding chr7:73246288 chr7:73246278 . . 0 hm6A_associated_SNPs_9688 0 0 0 1 73246274 73246296 mRNA hsa-miR-24 CLDN4 miRanda miRanda
14034 chr7 73246294 73246294 1 + C T rs180780542 73246277 + 73246257 73246297 41 CTGGCTGCTGGGGACTGGGGACTGGGCAGAGACTGAGCCAG CTGGCTGCTGGGGACTGGGGACTGGGCAGAGACTGAGTCAG < 41bp 1 0.76162869794 1 0.984330952167511 experiment 0.47674260412 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 CLDN4 ENSG00000189143 UTR3 Human protein_coding chr7:73246277 chr7:73246294 . . 0 hm6A_associated_SNPs_9689 0 0 0 1 73246274 73246296 mRNA hsa-miR-24 CLDN4 miRanda miRanda
14034 chr7 73246294 73246294 1 + C T rs180780542 73246288 + 73246268 73246308 41 GGACTGGGGACTGGGCAGAGACTGAGCCAGGCAGGAAGGCA GGACTGGGGACTGGGCAGAGACTGAGTCAGGCAGGAAGGCA < 41bp 1 0.728412636991137 1 0.980299949645996 experiment 0.543174726017726 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 CLDN4 ENSG00000189143 UTR3 Human protein_coding chr7:73246288 chr7:73246294 . . 0 hm6A_associated_SNPs_9690 0 0 0 1 73246274 73246296 mRNA hsa-miR-24 CLDN4 miRanda miRanda
14034 chr7 73818281 73818281 1 + C G rs150369686 73818280 + 73818260 73818300 41 CCGGGACTGTCACTTTGGAGACAAAACAGTGTTTGTAACAA CCGGGACTGTCACTTTGGAGAGAAAACAGTGTTTGTAACAA Direct Loss 1 0.753352466955997 1 0.974789083003998 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 CLIP2 ENSG00000106665 UTR3 Human protein_coding chr7:73818280 chr7:73818281 . . 0 hm6A_associated_SNPs_9700 0 0 0 2 73818272 73818293 mRNA hsa-miR-141 CLIP2 miRanda miRanda
14034 chr7 73818281 73818281 1 + C G rs150369686 73818280 + 73818260 73818300 41 CCGGGACTGTCACTTTGGAGACAAAACAGTGTTTGTAACAA CCGGGACTGTCACTTTGGAGAGAAAACAGTGTTTGTAACAA Direct Loss 1 0.753352466955997 1 0.974789083003998 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 CLIP2 ENSG00000106665 UTR3 Human protein_coding chr7:73818280 chr7:73818281 . . 0 hm6A_associated_SNPs_9700 0 0 0 2 73818272 73818293 mRNA hsa-miR-200a CLIP2 miRanda miRanda
14034 chr7 73818281 73818281 1 + C G rs150369686 73818285 + 73818265 73818305 41 ACTGTCACTTTGGAGACAAAACAGTGTTTGTAACAATAACG ACTGTCACTTTGGAGAGAAAACAGTGTTTGTAACAATAACG < 41bp 1 0.74946493354517 1 0.986575245857239 experiment 0.501070132909659 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 17 CLIP2 ENSG00000106665 UTR3 Human protein_coding chr7:73818285 chr7:73818281 . . 0 hm6A_associated_SNPs_9701 0 0 0 2 73818272 73818293 mRNA hsa-miR-141 CLIP2 miRanda miRanda
14034 chr7 73818281 73818281 1 + C G rs150369686 73818285 + 73818265 73818305 41 ACTGTCACTTTGGAGACAAAACAGTGTTTGTAACAATAACG ACTGTCACTTTGGAGAGAAAACAGTGTTTGTAACAATAACG < 41bp 1 0.74946493354517 1 0.986575245857239 experiment 0.501070132909659 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 17 CLIP2 ENSG00000106665 UTR3 Human protein_coding chr7:73818285 chr7:73818281 . . 0 hm6A_associated_SNPs_9701 0 0 0 2 73818272 73818293 mRNA hsa-miR-200a CLIP2 miRanda miRanda
14034 chr7 73818281 73818281 1 + C G rs150369686 73818297 + 73818277 73818317 41 GAGACAAAACAGTGTTTGTAACAATAACGTACTCACCGCCG GAGAGAAAACAGTGTTTGTAACAATAACGTACTCACCGCCG < 41bp 1 0.745350866843584 1 0.986560821533203 experiment 0.509298266312831 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 CLIP2 ENSG00000106665 UTR3 Human protein_coding chr7:73818297 chr7:73818281 . . 0 hm6A_associated_SNPs_9702 0 0 0 2 73818272 73818293 mRNA hsa-miR-141 CLIP2 miRanda miRanda
14034 chr7 73818281 73818281 1 + C G rs150369686 73818297 + 73818277 73818317 41 GAGACAAAACAGTGTTTGTAACAATAACGTACTCACCGCCG GAGAGAAAACAGTGTTTGTAACAATAACGTACTCACCGCCG < 41bp 1 0.745350866843584 1 0.986560821533203 experiment 0.509298266312831 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 CLIP2 ENSG00000106665 UTR3 Human protein_coding chr7:73818297 chr7:73818281 . . 0 hm6A_associated_SNPs_9702 0 0 0 2 73818272 73818293 mRNA hsa-miR-200a CLIP2 miRanda miRanda
14034 chr7 75517907 75517907 1 + T C rs872792 75517912 + 75517892 75517932 41 AGTCACGTGGCTCTTTAGTAACACGGACAAGGCTCCTCGCC AGTCACGTGGCTCTTCAGTAACACGGACAAGGCTCCTCGCC < 41bp 1 0.557065763768121 1 0.955610334873199 experiment 0.885868472463758 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 16 RHBDD2 ENSG00000005486 UTR3 Human protein_coding chr7:75517912 chr7:75517907 . . 0 hm6A_associated_SNPs_9707 0 0 1 1 75517888 75517912 mRNA hsa-miR-340 RHBDD2 miRanda miRanda
14034 chr7 75517907 75517907 1 + T C rs872792 75517918 + 75517898 75517938 41 GTGGCTCTTTAGTAACACGGACAAGGCTCCTCGCCAAGGAA GTGGCTCTTCAGTAACACGGACAAGGCTCCTCGCCAAGGAA < 41bp 1 0.672240174895177 1 0.969744920730591 experiment 0.655519650209647 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 10 RHBDD2 ENSG00000005486 UTR3 Human protein_coding chr7:75517918 chr7:75517907 . . 0 hm6A_associated_SNPs_9708 0 0 1 1 75517888 75517912 mRNA hsa-miR-340 RHBDD2 miRanda miRanda
14034 chr7 77408749 77408749 1 + G A rs79362753 77408753 + 77408733 77408773 41 TAGGTTTTAGAATAGAGCTGACATTAACATATATATATATA TAGGTTTTAGAATAGAACTGACATTAACATATATATATATA < 41bp 1 0.42838775964947 1 0.486276149749756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 RSBN1L ENSG00000187257 UTR3 Human protein_coding chr7:77408753 chr7:77408749 . . 0 hm6A_associated_SNPs_9731 0 0 1 3 77408748 77408766 mRNA hsa-miR-190 RSBN1L miRanda miRanda
14034 chr7 77408749 77408749 1 + G A rs79362753 77408753 + 77408733 77408773 41 TAGGTTTTAGAATAGAGCTGACATTAACATATATATATATA TAGGTTTTAGAATAGAACTGACATTAACATATATATATATA < 41bp 1 0.42838775964947 1 0.486276149749756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 RSBN1L ENSG00000187257 UTR3 Human protein_coding chr7:77408753 chr7:77408749 . . 0 hm6A_associated_SNPs_9731 0 0 1 3 77408731 77408752 mRNA hsa-miR-590-5p RSBN1L miRanda miRanda
14034 chr7 77408749 77408749 1 + G A rs79362753 77408753 + 77408733 77408773 41 TAGGTTTTAGAATAGAGCTGACATTAACATATATATATATA TAGGTTTTAGAATAGAACTGACATTAACATATATATATATA < 41bp 1 0.42838775964947 1 0.486276149749756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 RSBN1L ENSG00000187257 UTR3 Human protein_coding chr7:77408753 chr7:77408749 . . 0 hm6A_associated_SNPs_9731 0 0 1 3 77408747 77408766 mRNA hsa-miR-190b RSBN1L miRanda miRanda
14034 chr7 77584556 77584556 1 + C T rs571739288 77584550 + 77584530 77584570 41 TTTCTCCATCAATGCCGTGAACTTGCCTTACTTGAGGAAAA TTTCTCCATCAATGCCGTGAACTTGCTTTACTTGAGGAAAA < 41bp 1 0.481772625345227 1 0.895549654960632 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 PHTF2 ENSG00000006576 UTR3 Human protein_coding chr7:77584550 chr7:77584556 . . 0 hm6A_associated_SNPs_9733 0 0 1 3 77584544 77584565 mRNA hsa-miR-26a PHTF2 miRanda miRanda
14034 chr7 77584556 77584556 1 + C T rs571739288 77584550 + 77584530 77584570 41 TTTCTCCATCAATGCCGTGAACTTGCCTTACTTGAGGAAAA TTTCTCCATCAATGCCGTGAACTTGCTTTACTTGAGGAAAA < 41bp 1 0.481772625345227 1 0.895549654960632 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 PHTF2 ENSG00000006576 UTR3 Human protein_coding chr7:77584550 chr7:77584556 . . 0 hm6A_associated_SNPs_9733 0 0 1 3 77584545 77584565 mRNA hsa-miR-26b PHTF2 miRanda miRanda
14034 chr7 77584556 77584556 1 + C T rs571739288 77584550 + 77584530 77584570 41 TTTCTCCATCAATGCCGTGAACTTGCCTTACTTGAGGAAAA TTTCTCCATCAATGCCGTGAACTTGCTTTACTTGAGGAAAA < 41bp 1 0.481772625345227 1 0.895549654960632 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 PHTF2 ENSG00000006576 UTR3 Human protein_coding chr7:77584550 chr7:77584556 . . 0 hm6A_associated_SNPs_9733 0 0 1 3 77584549 77584565 mRNA hsa-miR-1297 PHTF2 miRanda miRanda
14034 chr7 79846978 79846978 1 + C G rs557080846 79846993 + 79846973 79847013 41 AAGGACCTTTCTTAAATGTGACAGATGGTCCTGCAGTGTGA AAGGAGCTTTCTTAAATGTGACAGATGGTCCTGCAGTGTGA < 41bp 1 0.543995594399556 1 0.897428154945374 experiment 0.912008811200889 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 GNAI1 ENSG00000127955 UTR3 Human protein_coding chr7:79846993 chr7:79846978 . . 0 hm6A_associated_SNPs_9739 0 0 1 2 79846975 79846994 mRNA hsa-miR-23a GNAI1 miRanda miRanda
14034 chr7 79846978 79846978 1 + C G rs557080846 79846993 + 79846973 79847013 41 AAGGACCTTTCTTAAATGTGACAGATGGTCCTGCAGTGTGA AAGGAGCTTTCTTAAATGTGACAGATGGTCCTGCAGTGTGA < 41bp 1 0.543995594399556 1 0.897428154945374 experiment 0.912008811200889 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 GNAI1 ENSG00000127955 UTR3 Human protein_coding chr7:79846993 chr7:79846978 . . 0 hm6A_associated_SNPs_9739 0 0 1 2 79846975 79846994 mRNA hsa-miR-23b GNAI1 miRanda miRanda
14034 chr7 86823221 86823221 1 + A G rs141391625 86823219 + 86823199 86823239 41 TCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTC TCCAGACGCCCTAGAAGCAGACGCTTTCCCAGATGAAATTC Direct Loss 1 0.561235511325884 1 0.916572451591492 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 23 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86823219 chr7:86823221 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_9743 0 0 1 3 86823205 86823226 mRNA hsa-miR-93 DMTF1 miRanda miRanda
14034 chr7 86823221 86823221 1 + A G rs141391625 86823219 + 86823199 86823239 41 TCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTC TCCAGACGCCCTAGAAGCAGACGCTTTCCCAGATGAAATTC Direct Loss 1 0.561235511325884 1 0.916572451591492 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 23 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86823219 chr7:86823221 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_9743 0 0 1 3 86823204 86823225 mRNA hsa-miR-373 DMTF1 miRanda miRanda
14034 chr7 86823221 86823221 1 + A G rs141391625 86823219 + 86823199 86823239 41 TCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTC TCCAGACGCCCTAGAAGCAGACGCTTTCCCAGATGAAATTC Direct Loss 1 0.561235511325884 1 0.916572451591492 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 23 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86823219 chr7:86823221 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_9743 0 0 1 3 86823202 86823225 mRNA hsa-miR-520d-3p DMTF1 miRanda miRanda
14034 chr7 87460375 87460375 1 + T C rs17330210 87460360 + 87460340 87460380 41 TAAAACATTTTAATGTTAAAACATCCCCACACTTATACACA TAAAACATTTTAATGTTAAAACATCCCCACACTTACACACA < 41bp 1 0.0302306851384428 1 0.00920042395591736 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 36 RUNDC3B ENSG00000105784 UTR3 Human protein_coding chr7:87460360 chr7:87460375 . . 0 hm6A_associated_SNPs_9747 0 0 1 1 87460366 87460390 mRNA hsa-miR-590-3p RUNDC3B miRanda miRanda
14034 chr7 89866621 89866621 1 + T C rs80214313 89866625 + 89866605 89866645 41 CTTTATCCTGATACCATTTAACACTGTCTGAATTAACTAGA CTTTATCCTGATACCACTTAACACTGTCTGAATTAACTAGA < 41bp 1 0.0618100369391194 1 0.719513654708862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 STEAP2 ENSG00000157214 UTR3 Human protein_coding chr7:89866625 chr7:89866621 . . 0 hm6A_associated_SNPs_9753 0 0 1 4 89866610 89866632 mRNA hsa-miR-199a-5p STEAP2 miRanda miRanda
14034 chr7 89866621 89866621 1 + T C rs80214313 89866625 + 89866605 89866645 41 CTTTATCCTGATACCATTTAACACTGTCTGAATTAACTAGA CTTTATCCTGATACCACTTAACACTGTCTGAATTAACTAGA < 41bp 1 0.0618100369391194 1 0.719513654708862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 STEAP2 ENSG00000157214 UTR3 Human protein_coding chr7:89866625 chr7:89866621 . . 0 hm6A_associated_SNPs_9753 0 0 1 4 89866609 89866632 mRNA hsa-miR-199b-5p STEAP2 miRanda miRanda
14034 chr7 89866621 89866621 1 + T C rs80214313 89866625 + 89866605 89866645 41 CTTTATCCTGATACCATTTAACACTGTCTGAATTAACTAGA CTTTATCCTGATACCACTTAACACTGTCTGAATTAACTAGA < 41bp 1 0.0618100369391194 1 0.719513654708862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 STEAP2 ENSG00000157214 UTR3 Human protein_coding chr7:89866625 chr7:89866621 . . 0 hm6A_associated_SNPs_9753 0 0 1 4 89866611 89866633 mRNA hsa-miR-128 STEAP2 miRanda miRanda
14034 chr7 89866621 89866621 1 + T C rs80214313 89866625 + 89866605 89866645 41 CTTTATCCTGATACCATTTAACACTGTCTGAATTAACTAGA CTTTATCCTGATACCACTTAACACTGTCTGAATTAACTAGA < 41bp 1 0.0618100369391194 1 0.719513654708862 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 STEAP2 ENSG00000157214 UTR3 Human protein_coding chr7:89866625 chr7:89866621 . . 0 hm6A_associated_SNPs_9753 0 0 1 4 89866614 89866636 mRNA hsa-miR-421 STEAP2 miRanda miRanda
14034 chr7 93555772 93555772 1 + T A rs60039560 93555758 + 93555738 93555778 41 GTACAATTATGGAAATAAGAACATTACTTGAGCATGACACT GTACAATTATGGAAATAAGAACATTACTTGAGCAAGACACT < 41bp 1 0.258941823229314 1 0.666421115398407 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 GNG11 ENSG00000127920 UTR3 Human protein_coding chr7:93555758 chr7:93555772 . . 0 hm6A_associated_SNPs_9775 0 0 1 1 93555767 93555786 mRNA hsa-miR-488 GNG11 miRanda miRanda
14034 chr7 93555777 93555777 1 + C T rs553262327 93555758 + 93555738 93555778 41 GTACAATTATGGAAATAAGAACATTACTTGAGCATGACACT GTACAATTATGGAAATAAGAACATTACTTGAGCATGACATT < 41bp 1 0.251295796772148 1 0.620805263519287 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 GNG11 ENSG00000127920 UTR3 Human protein_coding chr7:93555758 chr7:93555777 . . 0 hm6A_associated_SNPs_9776 0 0 1 1 93555767 93555786 mRNA hsa-miR-488 GNG11 miRanda miRanda
14034 chr7 96639882 96639882 1 + G A rs150681036 96639889 + 96639869 96639909 41 ACTTGTTTAATGAGTTTAAGACATTACATGGTGAAAGAGAA ACTTGTTTAATGAATTTAAGACATTACATGGTGAAAGAGAA < 41bp 1 0.552133600975871 1 0.964304327964783 experiment 0.895732798048257 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 DLX6-AS1 ENSG00000231764 ncRNA_intronic Human antisense chr7:96639889 chr7:96639882 . . 0 hm6A_associated_SNPs_9789 0 0 0 1 96639882 96639903 mRNA hsa-miR-197 DLX6 miRanda miRanda
14034 chr7 96810688 96810688 1 + G C rs16869283 96810704 + 96810684 96810724 41 ACTAGTGACAATTGAAAAAAACTATTGGAATAATAGCACTT ACTACTGACAATTGAAAAAAACTATTGGAATAATAGCACTT < 41bp 1 0.462362292942786 1 0.888351798057556 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 5 SDHAF3 ENSG00000196636 UTR3 Human protein_coding chr7:96810704 chr7:96810688 . . 0 hm6A_associated_SNPs_9792 0 0 1 1 96810671 96810696 mRNA hsa-miR-25 ACN9 miRanda miRanda
14034 chr7 98610314 98610314 1 + C T rs548927261 98610318 + 98610298 98610338 41 TCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTC TCTGTGAATGTACAGGTGGAACTGTACGAACAGCTCCCTTC < 41bp 1 0.698917459427014 1 0.991675078868866 experiment 0.602165081145972 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 17 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610318 chr7:98610314 . . 0 hm6A_associated_SNPs_9813 0 0 1 1 98610293 98610314 mRNA hsa-miR-486-5p TRRAP miRanda miRanda
14034 chr7 98610314 98610314 1 + C T rs548927261 98610327 + 98610307 98610347 41 GTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT GTACAGGTGGAACTGTACGAACAGCTCCCTTCCATCCATTT < 41bp 1 0.638088712403983 1 0.984046697616577 experiment 0.723822575192034 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610327 chr7:98610314 . . 0 hm6A_associated_SNPs_9814 0 0 1 1 98610293 98610314 mRNA hsa-miR-486-5p TRRAP miRanda miRanda
14034 chr7 98610682 98610682 1 + C A rs75219906 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATAACTGCACCT < 41bp 1 0.614353562228783 1 0.8625727891922 experiment 0.771292875542433 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610682 . . 0 hm6A_associated_SNPs_9820 0 0 1 4 98610671 98610693 mRNA hsa-miR-18a TRRAP miRanda miRanda
14034 chr7 98610682 98610682 1 + C A rs75219906 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATAACTGCACCT < 41bp 1 0.614353562228783 1 0.8625727891922 experiment 0.771292875542433 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610682 . . 0 hm6A_associated_SNPs_9820 0 0 1 4 98610670 98610693 mRNA hsa-miR-152 TRRAP miRanda miRanda
14034 chr7 98610682 98610682 1 + C A rs75219906 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATAACTGCACCT < 41bp 1 0.614353562228783 1 0.8625727891922 experiment 0.771292875542433 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610682 . . 0 hm6A_associated_SNPs_9820 0 0 1 4 98610672 98610693 mRNA hsa-miR-125a-3p TRRAP miRanda miRanda
14034 chr7 98610682 98610682 1 + C A rs75219906 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATAACTGCACCT < 41bp 1 0.614353562228783 1 0.8625727891922 experiment 0.771292875542433 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610682 . . 0 hm6A_associated_SNPs_9820 0 0 1 4 98610668 98610693 mRNA hsa-miR-18b TRRAP miRanda miRanda
14034 chr7 98610684 98610684 1 + C G rs219815 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATCAGTGCACCT < 41bp 1 0.620324936631301 1 0.857561230659485 experiment 0.759350126737398 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610684 . . 0 hm6A_associated_SNPs_9821 0 0 1 4 98610671 98610693 mRNA hsa-miR-18a TRRAP miRanda miRanda
14034 chr7 98610684 98610684 1 + C G rs219815 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATCAGTGCACCT < 41bp 1 0.620324936631301 1 0.857561230659485 experiment 0.759350126737398 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610684 . . 0 hm6A_associated_SNPs_9821 0 0 1 4 98610670 98610693 mRNA hsa-miR-152 TRRAP miRanda miRanda
14034 chr7 98610684 98610684 1 + C G rs219815 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATCAGTGCACCT < 41bp 1 0.620324936631301 1 0.857561230659485 experiment 0.759350126737398 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610684 . . 0 hm6A_associated_SNPs_9821 0 0 1 4 98610672 98610693 mRNA hsa-miR-125a-3p TRRAP miRanda miRanda
14034 chr7 98610684 98610684 1 + C G rs219815 98610671 + 98610651 98610691 41 GCTCTTCGGATGTCTTCTAGACATTTACTATCACTGCACCT GCTCTTCGGATGTCTTCTAGACATTTACTATCAGTGCACCT < 41bp 1 0.620324936631301 1 0.857561230659485 experiment 0.759350126737398 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 TRRAP ENSG00000196367 UTR3 Human protein_coding chr7:98610671 chr7:98610684 . . 0 hm6A_associated_SNPs_9821 0 0 1 4 98610668 98610693 mRNA hsa-miR-18b TRRAP miRanda miRanda
14034 chr7 99129954 99129954 1 + T C rs148263070 99129971 + 99129951 99129991 41 TTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATC TTTCCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATC < 41bp 1 0.429741452064795 1 0.193592756986618 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 4 ZKSCAN5 ENSG00000196652 UTR3 Human protein_coding chr7:99129971 chr7:99129954 . . 0 hm6A_associated_SNPs_9837 0 0 1 1 99129941 99129963 mRNA hsa-miR-490-3p ZKSCAN5 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632279 99632305 mRNA hsa-miR-15a ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632282 99632305 mRNA hsa-miR-16 ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632282 99632304 mRNA hsa-miR-103 ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632282 99632304 mRNA hsa-miR-107 ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632284 99632305 mRNA hsa-miR-15b ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632285 99632305 mRNA hsa-miR-195 ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632298 99632322 mRNA hsa-miR-374a ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632281 99632305 mRNA hsa-miR-424 ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632298 99632319 mRNA hsa-miR-410 ZKSCAN1 miRanda miRanda
14034 chr7 99632300 99632300 1 + C T rs74332524 99632295 + 99632275 99632315 41 AAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTA AAAACAAAAACGACATTGGGACATGTTGCTCAAGGTAGTTA < 41bp 1 0.632145042768804 1 0.950994253158569 experiment 0.735709914462391 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99632295 chr7:99632300 . . 0 hm6A_associated_SNPs_9851 0 0 1 10 99632280 99632305 mRNA hsa-miR-497 ZKSCAN1 miRanda miRanda
14034 chr7 99662559 99662559 1 + A G rs557785552 99662574 + 99662554 99662594 41 TTAAGATTGTTTAATTTTTAACATATATTCAAGAATTTTAA TTAAGGTTGTTTAATTTTTAACATATATTCAAGAATTTTAA < 41bp 1 0.534093484013224 1 0.222968608140945 experiment 0.931813031973552 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 ZSCAN21 ENSG00000166529 UTR3 Human protein_coding chr7:99662574 chr7:99662559 . . 0 hm6A_associated_SNPs_9870 0 0 1 5 99662548 99662568 mRNA hsa-miR-30a ZSCAN21 miRanda miRanda
14034 chr7 99662559 99662559 1 + A G rs557785552 99662574 + 99662554 99662594 41 TTAAGATTGTTTAATTTTTAACATATATTCAAGAATTTTAA TTAAGGTTGTTTAATTTTTAACATATATTCAAGAATTTTAA < 41bp 1 0.534093484013224 1 0.222968608140945 experiment 0.931813031973552 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 ZSCAN21 ENSG00000166529 UTR3 Human protein_coding chr7:99662574 chr7:99662559 . . 0 hm6A_associated_SNPs_9870 0 0 1 5 99662545 99662568 mRNA hsa-miR-30c ZSCAN21 miRanda miRanda
14034 chr7 99662559 99662559 1 + A G rs557785552 99662574 + 99662554 99662594 41 TTAAGATTGTTTAATTTTTAACATATATTCAAGAATTTTAA TTAAGGTTGTTTAATTTTTAACATATATTCAAGAATTTTAA < 41bp 1 0.534093484013224 1 0.222968608140945 experiment 0.931813031973552 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 ZSCAN21 ENSG00000166529 UTR3 Human protein_coding chr7:99662574 chr7:99662559 . . 0 hm6A_associated_SNPs_9870 0 0 1 5 99662546 99662568 mRNA hsa-miR-30d ZSCAN21 miRanda miRanda
14034 chr7 99662559 99662559 1 + A G rs557785552 99662574 + 99662554 99662594 41 TTAAGATTGTTTAATTTTTAACATATATTCAAGAATTTTAA TTAAGGTTGTTTAATTTTTAACATATATTCAAGAATTTTAA < 41bp 1 0.534093484013224 1 0.222968608140945 experiment 0.931813031973552 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 ZSCAN21 ENSG00000166529 UTR3 Human protein_coding chr7:99662574 chr7:99662559 . . 0 hm6A_associated_SNPs_9870 0 0 1 5 99662546 99662568 mRNA hsa-miR-30b ZSCAN21 miRanda miRanda
14034 chr7 99662559 99662559 1 + A G rs557785552 99662574 + 99662554 99662594 41 TTAAGATTGTTTAATTTTTAACATATATTCAAGAATTTTAA TTAAGGTTGTTTAATTTTTAACATATATTCAAGAATTTTAA < 41bp 1 0.534093484013224 1 0.222968608140945 experiment 0.931813031973552 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 ZSCAN21 ENSG00000166529 UTR3 Human protein_coding chr7:99662574 chr7:99662559 . . 0 hm6A_associated_SNPs_9870 0 0 1 5 99662548 99662568 mRNA hsa-miR-30e ZSCAN21 miRanda miRanda
14034 chr7 99689679 99689679 1 + C T rs7799720 99689684 + 99689664 99689704 41 ACCCCATGTCAGTCACATGGACTGGTCTTTAGCAAAGTCCA ACCCCATGTCAGTCATATGGACTGGTCTTTAGCAAAGTCCA < 41bp 1 0.604021418345089 1 0.940310597419739 experiment 0.791957163309822 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 COPS6 ENSG00000168090 UTR3 Human protein_coding chr7:99689684 chr7:99689679 . . 0 hm6A_associated_SNPs_9872 0 0 0 1 99689658 99689680 mRNA hsa-miR-134 COPS6 miRanda miRanda
14034 chr7 99751660 99751660 1 + G A rs117976447 99751680 + 99751660 99751700 41 GGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC AGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC < 41bp 1 0.661701241302204 1 0.0500771999359131 experiment 0.676597517395591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751680 chr7:99751660 . . 0 hm6A_associated_SNPs_9882 0 0 1 6 99751656 99751677 mRNA hsa-miR-15a C7orf59 miRanda miRanda
14034 chr7 99751660 99751660 1 + G A rs117976447 99751680 + 99751660 99751700 41 GGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC AGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC < 41bp 1 0.661701241302204 1 0.0500771999359131 experiment 0.676597517395591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751680 chr7:99751660 . . 0 hm6A_associated_SNPs_9882 0 0 1 6 99751656 99751677 mRNA hsa-miR-16 C7orf59 miRanda miRanda
14034 chr7 99751660 99751660 1 + G A rs117976447 99751680 + 99751660 99751700 41 GGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC AGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC < 41bp 1 0.661701241302204 1 0.0500771999359131 experiment 0.676597517395591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751680 chr7:99751660 . . 0 hm6A_associated_SNPs_9882 0 0 1 6 99751656 99751677 mRNA hsa-miR-15b C7orf59 miRanda miRanda
14034 chr7 99751660 99751660 1 + G A rs117976447 99751680 + 99751660 99751700 41 GGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC AGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC < 41bp 1 0.661701241302204 1 0.0500771999359131 experiment 0.676597517395591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751680 chr7:99751660 . . 0 hm6A_associated_SNPs_9882 0 0 1 6 99751657 99751677 mRNA hsa-miR-195 C7orf59 miRanda miRanda
14034 chr7 99751660 99751660 1 + G A rs117976447 99751680 + 99751660 99751700 41 GGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC AGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC < 41bp 1 0.661701241302204 1 0.0500771999359131 experiment 0.676597517395591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751680 chr7:99751660 . . 0 hm6A_associated_SNPs_9882 0 0 1 6 99751656 99751677 mRNA hsa-miR-424 C7orf59 miRanda miRanda
14034 chr7 99751660 99751660 1 + G A rs117976447 99751680 + 99751660 99751700 41 GGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC AGTCTTGGCTTGCTGCTAGAACTAGGGCCTTCTGCTCGCCC < 41bp 1 0.661701241302204 1 0.0500771999359131 experiment 0.676597517395591 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751680 chr7:99751660 . . 0 hm6A_associated_SNPs_9882 0 0 1 6 99751657 99751677 mRNA hsa-miR-497 C7orf59 miRanda miRanda
14034 chr7 99952828 99952828 1 + C T rs76798830 99952819 + 99952799 99952839 41 AAGGGAGGCAGTGAGAGCAGACATCTGTGCCTCATTCCTGA AAGGGAGGCAGTGAGAGCAGACATCTGTGTCTCATTCCTGA < 41bp 1 0.0631976454626756 1 0.0120187103748322 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 30 STAG3L5P-PVRIG2P-PILRB ENSG00000272752 ncRNA_exonic Human processed_transcript chr7:99952819 chr7:99952828 . . 0 hm6A_associated_SNPs_9885 0 0 1 1 99952808 99952830 mRNA hsa-miR-31 PILRB miRanda miRanda
14034 chr7 100205113 100205113 1 + A G rs149309227 100205107 + 100205087 100205127 41 GCCCAAAGCAGTGCCGCCGGACAGGCACCTTGCAGAGCAAC GCCCAAAGCAGTGCCGCCGGACAGGCGCCTTGCAGAGCAAC < 41bp 1 0.294651676423439 1 0.404858142137527 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205107 chr7:100205113 nonsynonymous SNV 0.984 2 hm6A_associated_SNPs_9899 0 0 1 2 100205096 100205118 mRNA hsa-miR-18a PCOLCE miRanda miRanda
14034 chr7 100205113 100205113 1 + A G rs149309227 100205107 + 100205087 100205127 41 GCCCAAAGCAGTGCCGCCGGACAGGCACCTTGCAGAGCAAC GCCCAAAGCAGTGCCGCCGGACAGGCGCCTTGCAGAGCAAC < 41bp 1 0.294651676423439 1 0.404858142137527 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205107 chr7:100205113 nonsynonymous SNV 0.984 2 hm6A_associated_SNPs_9899 0 0 1 2 100205096 100205118 mRNA hsa-miR-18b PCOLCE miRanda miRanda
14034 chr7 100781211 100781211 1 + G A rs13306843 100781217 + 100781197 100781237 41 GCCAAAGGCCAGTGGAAGAAACACCCTTTCATCTCAGAGTC GCCAAAGGCCAGTGAAAGAAACACCCTTTCATCTCAGAGTC < 41bp 1 0.155435958480364 1 0.727275431156158 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 SERPINE1 ENSG00000106366 UTR3 Human protein_coding chr7:100781217 chr7:100781211 . . 0 hm6A_associated_SNPs_9917 0 0 1 1 100781208 100781228 mRNA hsa-miR-488 SERPINE1 miRanda miRanda
14034 chr7 100781909 100781909 1 + C T rs2227714 100781916 + 100781896 100781936 41 CTTTCCCCAATTACAGGGTGACTCACAGCCGCATTGGTGAC CTTTCCCCAATTATAGGGTGACTCACAGCCGCATTGGTGAC < 41bp 1 0.513498993889293 1 0.00929409265518188 experiment 0.973002012221414 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 14 SERPINE1 ENSG00000106366 UTR3 Human protein_coding chr7:100781916 chr7:100781909 . . 0 hm6A_associated_SNPs_9918 1 0 1 2 100781891 100781915 mRNA hsa-miR-10a SERPINE1 miRanda miRanda
14034 chr7 100781909 100781909 1 + C T rs2227714 100781916 + 100781896 100781936 41 CTTTCCCCAATTACAGGGTGACTCACAGCCGCATTGGTGAC CTTTCCCCAATTATAGGGTGACTCACAGCCGCATTGGTGAC < 41bp 1 0.513498993889293 1 0.00929409265518188 experiment 0.973002012221414 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 14 SERPINE1 ENSG00000106366 UTR3 Human protein_coding chr7:100781916 chr7:100781909 . . 0 hm6A_associated_SNPs_9918 1 0 1 2 100781893 100781915 mRNA hsa-miR-10b SERPINE1 miRanda miRanda
14034 chr7 100866042 100866042 1 + C T rs61748356 100866050 + 100866030 100866070 41 TCAGTTTGATGACGATGCGGACACTGGTGAGGCGGATGGAG TCAGTTTGATGATGATGCGGACACTGGTGAGGCGGATGGAG < 41bp 1 0.631352960364206 1 0.987676978111267 experiment 0.737294079271589 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 13 ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866050 chr7:100866042 synonymous SNV . 0 hm6A_associated_SNPs_9921 0 0 1 2 100866035 100866055 mRNA hsa-miR-199a-5p ZNHIT1 miRanda miRanda
14034 chr7 100866042 100866042 1 + C T rs61748356 100866050 + 100866030 100866070 41 TCAGTTTGATGACGATGCGGACACTGGTGAGGCGGATGGAG TCAGTTTGATGATGATGCGGACACTGGTGAGGCGGATGGAG < 41bp 1 0.631352960364206 1 0.987676978111267 experiment 0.737294079271589 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 13 ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866050 chr7:100866042 synonymous SNV . 0 hm6A_associated_SNPs_9921 0 0 1 2 100866035 100866055 mRNA hsa-miR-199b-5p ZNHIT1 miRanda miRanda
14034 chr7 100866048 100866048 1 + G A rs139212136 100866050 + 100866030 100866070 41 TCAGTTTGATGACGATGCGGACACTGGTGAGGCGGATGGAG TCAGTTTGATGACGATGCAGACACTGGTGAGGCGGATGGAG < 41bp 1 0.569926455366529 1 0.978754997253418 experiment 0.860147089266942 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 19 ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866050 chr7:100866048 synonymous SNV . 0 hm6A_associated_SNPs_9922 0 0 1 2 100866035 100866055 mRNA hsa-miR-199a-5p ZNHIT1 miRanda miRanda
14034 chr7 100866048 100866048 1 + G A rs139212136 100866050 + 100866030 100866070 41 TCAGTTTGATGACGATGCGGACACTGGTGAGGCGGATGGAG TCAGTTTGATGACGATGCAGACACTGGTGAGGCGGATGGAG < 41bp 1 0.569926455366529 1 0.978754997253418 experiment 0.860147089266942 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 19 ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866050 chr7:100866048 synonymous SNV . 0 hm6A_associated_SNPs_9922 0 0 1 2 100866035 100866055 mRNA hsa-miR-199b-5p ZNHIT1 miRanda miRanda
14034 chr7 102113509 102113509 1 + G A rs146938090 102113516 + 102113496 102113536 41 GCCTCACACCATCGCAAAGGACCAGGGACACAGCTAACTAA GCCTCACACCATCACAAAGGACCAGGGACACAGCTAACTAA < 41bp 1 0.761022499855669 1 0.996900200843811 experiment 0.477955000288663 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 LRWD1 ENSG00000161036 UTR3 Human protein_coding chr7:102113516 chr7:102113509 . . 0 hm6A_associated_SNPs_9946 0 0 1 1 102113497 102113514 mRNA hsa-miR-450a LRWD1 miRanda miRanda
14034 chr7 102113509 102113509 1 + G A rs146938090 102113523 + 102113503 102113543 41 ACCATCGCAAAGGACCAGGGACACAGCTAACTAACTTATTC ACCATCACAAAGGACCAGGGACACAGCTAACTAACTTATTC < 41bp 1 0.762035858038989 1 0.996370315551758 experiment 0.475928283922022 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 LRWD1 ENSG00000161036 UTR3 Human protein_coding chr7:102113523 chr7:102113509 . . 0 hm6A_associated_SNPs_9947 0 0 1 1 102113497 102113514 mRNA hsa-miR-450a LRWD1 miRanda miRanda
14034 chr7 102113520 102113520 1 + G A rs202157868 102113516 + 102113496 102113536 41 GCCTCACACCATCGCAAAGGACCAGGGACACAGCTAACTAA GCCTCACACCATCGCAAAGGACCAAGGACACAGCTAACTAA < 41bp 1 0.770648060521136 1 0.998695433139801 experiment 0.458703878957728 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 LRWD1 ENSG00000161036 UTR3 Human protein_coding chr7:102113516 chr7:102113520 . . 0 hm6A_associated_SNPs_9948 0 0 1 1 102113518 102113540 mRNA hsa-miR-382 LRWD1 miRanda miRanda
14034 chr7 102113520 102113520 1 + G A rs202157868 102113532 + 102113512 102113552 41 AAGGACCAGGGACACAGCTAACTAACTTATTCAGCTTTGGG AAGGACCAAGGACACAGCTAACTAACTTATTCAGCTTTGGG < 41bp 1 0.663241108284937 1 0.996012985706329 experiment 0.673517783430125 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 LRWD1 ENSG00000161036 UTR3 Human protein_coding chr7:102113532 chr7:102113520 . . 0 hm6A_associated_SNPs_9949 0 0 1 1 102113518 102113540 mRNA hsa-miR-382 LRWD1 miRanda miRanda
14034 chr7 102113520 102113520 1 + G A rs202157868 102113536 + 102113516 102113556 41 ACCAGGGACACAGCTAACTAACTTATTCAGCTTTGGGCCGA ACCAAGGACACAGCTAACTAACTTATTCAGCTTTGGGCCGA < 41bp 1 0.756769053050978 1 0.99709016084671 experiment 0.486461893898043 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 LRWD1 ENSG00000161036 UTR3 Human protein_coding chr7:102113536 chr7:102113520 . . 0 hm6A_associated_SNPs_9950 0 0 1 1 102113518 102113540 mRNA hsa-miR-382 LRWD1 miRanda miRanda
14034 chr7 103008590 103008590 1 + C G rs7792404 103008578 + 103008558 103008598 41 TGTTAATAACCAATTCATAAACAAATAAATGGCTTCAAAAT TGTTAATAACCAATTCATAAACAAATAAATGGGTTCAAAAT < 41bp 1 0.760461570521381 1 0.279490798711777 experiment 0.479076858957238 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 33 PSMC2 ENSG00000161057 UTR3 Human protein_coding chr7:103008578 chr7:103008590 . . 0 hm6A_associated_SNPs_9957 0 0 1 1 103008580 103008600 mRNA hsa-miR-590-3p PSMC2 miRanda miRanda
14034 chr7 106801016 106801016 1 + G C rs1804175 106801001 + 106800981 106801021 41 CATAATACAGTCCTATGTAGACATCTGTTCCCTTGGGTTTC CATAATACAGTCCTATGTAGACATCTGTTCCCTTGCGTTTC < 41bp 1 0.58850819548615 1 0.000678896903991699 experiment 0.8229836090277 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 PRKAR2B ENSG00000005249 UTR3 Human protein_coding chr7:106801001 chr7:106801016 . . 0 hm6A_associated_SNPs_9967 0 0 1 1 106801002 106801026 mRNA hsa-miR-191 PRKAR2B miRanda miRanda
14034 chr7 107400478 107400478 1 + A G rs540087322 107400491 + 107400471 107400511 41 AAGTAACATTATTTTATAGAACTGTTTAAATGGGTTTAAAT AAGTAACGTTATTTTATAGAACTGTTTAAATGGGTTTAAAT < 41bp 1 0.247812725742288 1 0.747345924377441 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 CBLL1 ENSG00000105879 UTR3 Human protein_coding chr7:107400491 chr7:107400478 . . 0 hm6A_associated_SNPs_9970 0 0 1 1 107400476 107400497 mRNA hsa-miR-132 CBLL1 miRanda miRanda
14034 chr7 107559911 107559911 1 + G A rs4564 107559918 + 107559898 107559938 41 TCAGTGCACTAATGTGTAAGACAAAAAGCTACTTATTGTAG TCAGTGCACTAATATGTAAGACAAAAAGCTACTTATTGTAG < 41bp 1 0.685832670264264 1 0.575717270374298 experiment 0.628334659471473 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 DLD ENSG00000091140 UTR3 Human protein_coding chr7:107559918 chr7:107559911 . . 0 hm6A_associated_SNPs_9975 3 0 1 2 107559910 107559932 mRNA hsa-miR-302a DLD miRanda miRanda
14034 chr7 107559911 107559911 1 + G A rs4564 107559918 + 107559898 107559938 41 TCAGTGCACTAATGTGTAAGACAAAAAGCTACTTATTGTAG TCAGTGCACTAATATGTAAGACAAAAAGCTACTTATTGTAG < 41bp 1 0.685832670264264 1 0.575717270374298 experiment 0.628334659471473 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 DLD ENSG00000091140 UTR3 Human protein_coding chr7:107559918 chr7:107559911 . . 0 hm6A_associated_SNPs_9975 3 0 1 2 107559910 107559932 mRNA hsa-miR-302b DLD miRanda miRanda
14034 chr7 111982877 111982877 1 + A G rs138058026 111982862 + 111982842 111982882 41 TATGAGACAGATATGAAAGAACAATTTAAATTTGAACATCA TATGAGACAGATATGAAAGAACAATTTAAATTTGAGCATCA < 41bp 1 0.689811819930356 1 0.99084085226059 experiment 0.620376360139288 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF277 ENSG00000226851 ncRNA_intronic Human antisense chr7:111982862 chr7:111982877 . . 0 hm6A_associated_SNPs_9980 0 0 1 1 111982866 111982886 mRNA hsa-miR-653 ZNF277 miRanda miRanda
14034 chr7 111982879 111982879 1 + A G rs116672577 111982862 + 111982842 111982882 41 TATGAGACAGATATGAAAGAACAATTTAAATTTGAACATCA TATGAGACAGATATGAAAGAACAATTTAAATTTGAACGTCA < 41bp 1 0.718366636979881 1 0.992884039878845 experiment 0.563266726040239 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 ZNF277 ENSG00000226851 ncRNA_intronic Human antisense chr7:111982862 chr7:111982879 . . 0 hm6A_associated_SNPs_9981 0 0 1 1 111982866 111982886 mRNA hsa-miR-653 ZNF277 miRanda miRanda
14034 chr7 111982879 111982879 1 + A G rs116672577 111982877 + 111982857 111982897 41 AAAGAACAATTTAAATTTGAACATCAACAAAAGATTGGTCC AAAGAACAATTTAAATTTGAACGTCAACAAAAGATTGGTCC Direct Loss 1 0.436459198085014 1 0.985798716545105 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 23 ZNF277 ENSG00000226851 ncRNA_intronic Human antisense chr7:111982877 chr7:111982879 . . 0 hm6A_associated_SNPs_9982 0 0 1 1 111982866 111982886 mRNA hsa-miR-653 ZNF277 miRanda miRanda
14034 chr7 112115658 112115658 1 + C G rs7817 112115666 + 112115646 112115686 41 ACAGTTTTTATCCTGGATTAACTTAGATAACTTTTGTAGCA ACAGTTTTTATCGTGGATTAACTTAGATAACTTTTGTAGCA < 41bp 1 0.538104361006101 1 0.630399942398071 experiment 0.923791277987797 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 IFRD1 ENSG00000006652 UTR3 Human protein_coding chr7:112115666 chr7:112115658 . . 0 hm6A_associated_SNPs_9983 0 0 1 1 112115650 112115673 mRNA hsa-miR-26a IFRD1 miRanda miRanda
14034 chr7 112115919 112115919 1 + A G rs151068777 112115933 + 112115913 112115953 41 ATATACATGCAAGATATTTAACTTAATATCTTAGACAAGAG ATATACGTGCAAGATATTTAACTTAATATCTTAGACAAGAG < 41bp 1 0.146247333788372 1 0.200859487056732 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 IFRD1 ENSG00000006652 UTR3 Human protein_coding chr7:112115933 chr7:112115919 . . 0 hm6A_associated_SNPs_9984 0 0 1 1 112115908 112115928 mRNA hsa-miR-431 IFRD1 miRanda miRanda
14034 chr7 114656735 114656735 1 + T C rs150991171 114656742 + 114656722 114656762 41 ATAAATAAATAAATAAATAAACAAACCAGTCTTTATTTTAA ATAAATAAATAAACAAATAAACAAACCAGTCTTTATTTTAA < 41bp 1 0.0500910096114367 1 0.00100529193878174 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 MDFIC ENSG00000135272 UTR3 Human protein_coding chr7:114656742 chr7:114656735 . . 0 hm6A_associated_SNPs_9987 0 0 1 2 114656734 114656756 mRNA hsa-miR-320a MDFIC miRanda miRanda
14034 chr7 114656735 114656735 1 + T C rs150991171 114656742 + 114656722 114656762 41 ATAAATAAATAAATAAATAAACAAACCAGTCTTTATTTTAA ATAAATAAATAAACAAATAAACAAACCAGTCTTTATTTTAA < 41bp 1 0.0500910096114367 1 0.00100529193878174 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 MDFIC ENSG00000135272 UTR3 Human protein_coding chr7:114656742 chr7:114656735 . . 0 hm6A_associated_SNPs_9987 0 0 1 2 114656734 114656756 mRNA hsa-miR-320b MDFIC miRanda miRanda
14034 chr7 114656739 114656739 1 + T C rs9769338 114656742 + 114656722 114656762 41 ATAAATAAATAAATAAATAAACAAACCAGTCTTTATTTTAA ATAAATAAATAAATAAACAAACAAACCAGTCTTTATTTTAA < 41bp 1 0.05457651083375 1 0.00112193822860718 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 MDFIC ENSG00000135272 UTR3 Human protein_coding chr7:114656742 chr7:114656739 . . 0 hm6A_associated_SNPs_9988 0 0 1 4 114656734 114656756 mRNA hsa-miR-320a MDFIC miRanda miRanda
14034 chr7 114656739 114656739 1 + T C rs9769338 114656742 + 114656722 114656762 41 ATAAATAAATAAATAAATAAACAAACCAGTCTTTATTTTAA ATAAATAAATAAATAAACAAACAAACCAGTCTTTATTTTAA < 41bp 1 0.05457651083375 1 0.00112193822860718 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 MDFIC ENSG00000135272 UTR3 Human protein_coding chr7:114656742 chr7:114656739 . . 0 hm6A_associated_SNPs_9988 0 0 1 4 114656734 114656756 mRNA hsa-miR-320b MDFIC miRanda miRanda
14034 chr7 114656739 114656739 1 + T C rs9769338 114656742 + 114656722 114656762 41 ATAAATAAATAAATAAATAAACAAACCAGTCTTTATTTTAA ATAAATAAATAAATAAACAAACAAACCAGTCTTTATTTTAA < 41bp 1 0.05457651083375 1 0.00112193822860718 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 MDFIC ENSG00000135272 UTR3 Human protein_coding chr7:114656742 chr7:114656739 . . 0 hm6A_associated_SNPs_9988 0 0 1 4 114656736 114656756 mRNA hsa-miR-320c MDFIC miRanda miRanda
14034 chr7 114656739 114656739 1 + T C rs9769338 114656742 + 114656722 114656762 41 ATAAATAAATAAATAAATAAACAAACCAGTCTTTATTTTAA ATAAATAAATAAATAAACAAACAAACCAGTCTTTATTTTAA < 41bp 1 0.05457651083375 1 0.00112193822860718 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 MDFIC ENSG00000135272 UTR3 Human protein_coding chr7:114656742 chr7:114656739 . . 0 hm6A_associated_SNPs_9988 0 0 1 4 114656737 114656756 mRNA hsa-miR-320d MDFIC miRanda miRanda
14034 chr7 116146170 116146170 1 + G A rs150718300 116146184 + 116146164 116146204 41 AGCCAGGATTGAATACTTGGACCCCAGGTCTGGAGATTGGG AGCCAGAATTGAATACTTGGACCCCAGGTCTGGAGATTGGG < 41bp 1 0.614209609834423 1 0.0473498106002808 experiment 0.771580780331153 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 CAV2 ENSG00000105971 CDS Human protein_coding chr7:116146184 chr7:116146170 nonsynonymous SNV 0.618 1 hm6A_associated_SNPs_9993 0 0 1 1 116146148 116146170 mRNA hsa-miR-149 CAV2 miRanda miRanda
14034 chr7 116199615 116199615 1 + A T rs566090149 116199621 + 116199601 116199641 41 CTTTATTGGCTGAGATATGAACATATTGTTGAAAGGTAATT CTTTATTGGCTGAGTTATGAACATATTGTTGAAAGGTAATT < 41bp 1 0.527589011985348 1 0.809031844139099 experiment 0.944821976029304 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116199621 chr7:116199615 . . 0 hm6A_associated_SNPs_9997 0 0 1 1 116199610 116199633 mRNA hsa-miR-421 CAV1 miRanda miRanda
14034 chr7 116200185 116200185 1 + G A rs149177372 116200201 + 116200181 116200221 41 ATCCGTAGTGGGTATGGTTGACACTAGCCCAATGAAATGAA ATCCATAGTGGGTATGGTTGACACTAGCCCAATGAAATGAA < 41bp 1 0.535174611447352 1 0.0383813381195068 experiment 0.929650777105296 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116200201 chr7:116200185 . . 0 hm6A_associated_SNPs_10002 0 0 1 2 116200182 116200206 mRNA hsa-miR-454 CAV1 miRanda miRanda
14034 chr7 116200185 116200185 1 + G A rs149177372 116200201 + 116200181 116200221 41 ATCCGTAGTGGGTATGGTTGACACTAGCCCAATGAAATGAA ATCCATAGTGGGTATGGTTGACACTAGCCCAATGAAATGAA < 41bp 1 0.535174611447352 1 0.0383813381195068 experiment 0.929650777105296 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116200201 chr7:116200185 . . 0 hm6A_associated_SNPs_10002 0 0 1 2 116200183 116200206 mRNA hsa-miR-301b CAV1 miRanda miRanda
14034 chr7 116200198 116200198 1 + T C rs35386406 116200201 + 116200181 116200221 41 ATCCGTAGTGGGTATGGTTGACACTAGCCCAATGAAATGAA ATCCGTAGTGGGTATGGCTGACACTAGCCCAATGAAATGAA < 41bp 1 0.531845663261287 1 0.0428875088691711 experiment 0.936308673477426 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116200201 chr7:116200198 . . 0 hm6A_associated_SNPs_10003 0 0 0 2 116200182 116200206 mRNA hsa-miR-454 CAV1 miRanda miRanda
14034 chr7 116200198 116200198 1 + T C rs35386406 116200201 + 116200181 116200221 41 ATCCGTAGTGGGTATGGTTGACACTAGCCCAATGAAATGAA ATCCGTAGTGGGTATGGCTGACACTAGCCCAATGAAATGAA < 41bp 1 0.531845663261287 1 0.0428875088691711 experiment 0.936308673477426 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116200201 chr7:116200198 . . 0 hm6A_associated_SNPs_10003 0 0 0 2 116200183 116200206 mRNA hsa-miR-301b CAV1 miRanda miRanda
14034 chr7 116200936 116200936 1 + A T rs34585220 116200944 + 116200924 116200964 41 GGATATAGTTTTACTTTTAAACTGTGTACATAACTGAAAAT GGATATAGTTTTTCTTTTAAACTGTGTACATAACTGAAAAT < 41bp 1 0.246200868601924 1 0.867098331451416 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 13 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116200944 chr7:116200936 . . 0 hm6A_associated_SNPs_10009 0 0 1 3 116200931 116200951 mRNA hsa-miR-27a CAV1 miRanda miRanda
14034 chr7 116200936 116200936 1 + A T rs34585220 116200944 + 116200924 116200964 41 GGATATAGTTTTACTTTTAAACTGTGTACATAACTGAAAAT GGATATAGTTTTTCTTTTAAACTGTGTACATAACTGAAAAT < 41bp 1 0.246200868601924 1 0.867098331451416 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 13 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116200944 chr7:116200936 . . 0 hm6A_associated_SNPs_10009 0 0 1 3 116200931 116200951 mRNA hsa-miR-27b CAV1 miRanda miRanda
14034 chr7 116200936 116200936 1 + A T rs34585220 116200944 + 116200924 116200964 41 GGATATAGTTTTACTTTTAAACTGTGTACATAACTGAAAAT GGATATAGTTTTTCTTTTAAACTGTGTACATAACTGAAAAT < 41bp 1 0.246200868601924 1 0.867098331451416 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 13 CAV1 ENSG00000105974 UTR3 Human protein_coding chr7:116200944 chr7:116200936 . . 0 hm6A_associated_SNPs_10009 0 0 1 3 116200930 116200950 mRNA hsa-miR-128 CAV1 miRanda miRanda
14034 chr7 120614923 120614923 1 + A G rs200290830 120614929 + 120614909 120614949 41 TTTGTTTGATGAAGAAATAAACTTCAGCTGAAGATTTTATA TTTGTTTGATGAAGGAATAAACTTCAGCTGAAGATTTTATA < 41bp 1 0.161631421500258 1 0.954536616802216 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 ING3 ENSG00000071243 UTR3 Human protein_coding chr7:120614929 chr7:120614923 . . 0 hm6A_associated_SNPs_10023 0 0 1 3 120614903 120614924 mRNA hsa-miR-205 ING3 miRanda miRanda
14034 chr7 120614923 120614923 1 + A G rs200290830 120614929 + 120614909 120614949 41 TTTGTTTGATGAAGAAATAAACTTCAGCTGAAGATTTTATA TTTGTTTGATGAAGGAATAAACTTCAGCTGAAGATTTTATA < 41bp 1 0.161631421500258 1 0.954536616802216 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 ING3 ENSG00000071243 UTR3 Human protein_coding chr7:120614929 chr7:120614923 . . 0 hm6A_associated_SNPs_10023 0 0 1 3 120614923 120614945 mRNA hsa-miR-216a ING3 miRanda miRanda
14034 chr7 120614923 120614923 1 + A G rs200290830 120614929 + 120614909 120614949 41 TTTGTTTGATGAAGAAATAAACTTCAGCTGAAGATTTTATA TTTGTTTGATGAAGGAATAAACTTCAGCTGAAGATTTTATA < 41bp 1 0.161631421500258 1 0.954536616802216 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 ING3 ENSG00000071243 UTR3 Human protein_coding chr7:120614929 chr7:120614923 . . 0 hm6A_associated_SNPs_10023 0 0 1 3 120614906 120614928 mRNA hsa-miR-137 ING3 miRanda miRanda
14034 chr7 120615229 120615229 1 + A G rs114305307 120615213 + 120615193 120615233 41 ATGGGCATTCTATGATTTAGACTTCAAGGAATTCCAATGAT ATGGGCATTCTATGATTTAGACTTCAAGGAATTCCAGTGAT < 41bp 1 0.208963186394365 1 0.960510730743408 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 37 ING3 ENSG00000071243 UTR3 Human protein_coding chr7:120615213 chr7:120615229 . . 0 hm6A_associated_SNPs_10024 0 0 1 1 120615220 120615239 mRNA hsa-miR-205 ING3 miRanda miRanda
14034 chr7 128409448 128409448 1 + C G rs116822773 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACAGTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.699193780007788 1 0.169488161802292 experiment 0.601612439984425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409448 . . 0 hm6A_associated_SNPs_10044 0 0 1 7 128409425 128409452 mRNA hsa-miR-17 CALU miRanda miRanda
14034 chr7 128409448 128409448 1 + C G rs116822773 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACAGTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.699193780007788 1 0.169488161802292 experiment 0.601612439984425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409448 . . 0 hm6A_associated_SNPs_10044 0 0 1 7 128409430 128409452 mRNA hsa-miR-20a CALU miRanda miRanda
14034 chr7 128409448 128409448 1 + C G rs116822773 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACAGTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.699193780007788 1 0.169488161802292 experiment 0.601612439984425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409448 . . 0 hm6A_associated_SNPs_10044 0 0 1 7 128409431 128409452 mRNA hsa-miR-93 CALU miRanda miRanda
14034 chr7 128409448 128409448 1 + C G rs116822773 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACAGTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.699193780007788 1 0.169488161802292 experiment 0.601612439984425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409448 . . 0 hm6A_associated_SNPs_10044 0 0 1 7 128409425 128409452 mRNA hsa-miR-106a CALU miRanda miRanda
14034 chr7 128409448 128409448 1 + C G rs116822773 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACAGTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.699193780007788 1 0.169488161802292 experiment 0.601612439984425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409448 . . 0 hm6A_associated_SNPs_10044 0 0 1 7 128409432 128409452 mRNA hsa-miR-106b CALU miRanda miRanda
14034 chr7 128409448 128409448 1 + C G rs116822773 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACAGTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.699193780007788 1 0.169488161802292 experiment 0.601612439984425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409448 . . 0 hm6A_associated_SNPs_10044 0 0 1 7 128409430 128409452 mRNA hsa-miR-20b CALU miRanda miRanda
14034 chr7 128409448 128409448 1 + C G rs116822773 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACAGTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.699193780007788 1 0.169488161802292 experiment 0.601612439984425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409448 . . 0 hm6A_associated_SNPs_10044 0 0 1 7 128409431 128409452 mRNA hsa-miR-519d CALU miRanda miRanda
14034 chr7 128409449 128409449 1 + T C rs537258411 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACACCTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.694251704175915 1 0.139759451150894 experiment 0.61149659164817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409449 . . 0 hm6A_associated_SNPs_10045 0 0 1 7 128409425 128409452 mRNA hsa-miR-17 CALU miRanda miRanda
14034 chr7 128409449 128409449 1 + T C rs537258411 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACACCTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.694251704175915 1 0.139759451150894 experiment 0.61149659164817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409449 . . 0 hm6A_associated_SNPs_10045 0 0 1 7 128409430 128409452 mRNA hsa-miR-20a CALU miRanda miRanda
14034 chr7 128409449 128409449 1 + T C rs537258411 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACACCTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.694251704175915 1 0.139759451150894 experiment 0.61149659164817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409449 . . 0 hm6A_associated_SNPs_10045 0 0 1 7 128409431 128409452 mRNA hsa-miR-93 CALU miRanda miRanda
14034 chr7 128409449 128409449 1 + T C rs537258411 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACACCTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.694251704175915 1 0.139759451150894 experiment 0.61149659164817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409449 . . 0 hm6A_associated_SNPs_10045 0 0 1 7 128409425 128409452 mRNA hsa-miR-106a CALU miRanda miRanda
14034 chr7 128409449 128409449 1 + T C rs537258411 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACACCTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.694251704175915 1 0.139759451150894 experiment 0.61149659164817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409449 . . 0 hm6A_associated_SNPs_10045 0 0 1 7 128409432 128409452 mRNA hsa-miR-106b CALU miRanda miRanda
14034 chr7 128409449 128409449 1 + T C rs537258411 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACACCTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.694251704175915 1 0.139759451150894 experiment 0.61149659164817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409449 . . 0 hm6A_associated_SNPs_10045 0 0 1 7 128409430 128409452 mRNA hsa-miR-20b CALU miRanda miRanda
14034 chr7 128409449 128409449 1 + T C rs537258411 128409465 + 128409445 128409485 41 ACACTTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT ACACCTTGTATTATGTATTAACATGGCGTGTTTATTTTTGT < 41bp 1 0.694251704175915 1 0.139759451150894 experiment 0.61149659164817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409465 chr7:128409449 . . 0 hm6A_associated_SNPs_10045 0 0 1 7 128409431 128409452 mRNA hsa-miR-519d CALU miRanda miRanda
14034 chr7 128409890 128409890 1 + G A rs41274230 128409874 + 128409854 128409894 41 TTTTTCCCCCTGTAGGACTGACTGTTGGCTAATTTTGTCAA TTTTTCCCCCTGTAGGACTGACTGTTGGCTAATTTTATCAA < 41bp 1 0.576207813131111 1 0.0464074909687042 experiment 0.847584373737778 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409874 chr7:128409890 . . 0 hm6A_associated_SNPs_10046 0 0 1 1 128409880 128409900 mRNA hsa-miR-218 CALU miRanda miRanda
14034 chr7 128410254 128410254 1 + A G rs540223106 128410246 + 128410226 128410266 41 AATGGGAATTCTCTTAAGAAACCCTGAGATTAAAAAAAGAC AATGGGAATTCTCTTAAGAAACCCTGAGGTTAAAAAAAGAC < 41bp 1 0.113665311147714 1 0.143798172473907 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128410246 chr7:128410254 . . 0 hm6A_associated_SNPs_10050 0 0 1 1 128410236 128410257 mRNA hsa-miR-216a CALU miRanda miRanda
14034 chr7 128410255 128410255 1 + T A rs559226411 128410246 + 128410226 128410266 41 AATGGGAATTCTCTTAAGAAACCCTGAGATTAAAAAAAGAC AATGGGAATTCTCTTAAGAAACCCTGAGAATAAAAAAAGAC < 41bp 1 0.104533829909405 1 0.188245803117752 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 30 CALU ENSG00000128595 UTR3 Human protein_coding chr7:128410246 chr7:128410255 . . 0 hm6A_associated_SNPs_10051 0 0 1 1 128410236 128410257 mRNA hsa-miR-216a CALU miRanda miRanda
14034 chr7 128807786 128807786 1 + G A rs3173902 128807767 + 128807747 128807787 41 CTGGCAAGCCTCATAAACGAACAGCAGTGGGTGCTGAAAGC CTGGCAAGCCTCATAAACGAACAGCAGTGGGTGCTGAAAAC < 41bp 1 0.529485537634116 1 0.988198757171631 experiment 0.941028924731768 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 40 TSPAN33 ENSG00000158457 UTR3 Human protein_coding chr7:128807767 chr7:128807786 . . 0 hm6A_associated_SNPs_10059 0 0 1 1 128807779 128807802 mRNA hsa-miR-136 TSPAN33 miRanda miRanda
14034 chr7 128808071 128808071 1 + T C rs138117385 128808086 + 128808066 128808106 41 GATGCTCCTGAGCTTGGCGGACATACTTAGATCCTAACGTG GATGCCCCTGAGCTTGGCGGACATACTTAGATCCTAACGTG < 41bp 1 0.310430087382681 1 0.866821765899658 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 TSPAN33 ENSG00000240685 ncRNA_exonic Human other chr7:128808086 chr7:128808071 . . 0 hm6A_associated_SNPs_10060 0 0 0 1 128808049 128808071 mRNA hsa-miR-324-5p TSPAN33 miRanda miRanda
14034 chr7 128853083 128853083 1 + G A rs539798844 128853100 + 128853080 128853120 41 TGGGATAGGAGCAGTGAGTGACAAAGCCTCTGAAAGATGCA TGGAATAGGAGCAGTGAGTGACAAAGCCTCTGAAAGATGCA < 41bp 1 0.371301194533659 1 0.0316522121429443 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 4 SMO ENSG00000243230 ncRNA_intronic Human antisense chr7:128853100 chr7:128853083 . . 0 hm6A_associated_SNPs_10068 0 0 1 1 128853078 128853101 mRNA hsa-miR-197 SMO miRanda miRanda
14034 chr7 128853113 128853113 1 + A G rs558194830 128853100 + 128853080 128853120 41 TGGGATAGGAGCAGTGAGTGACAAAGCCTCTGAAAGATGCA TGGGATAGGAGCAGTGAGTGACAAAGCCTCTGAGAGATGCA < 41bp 1 0.350624484642847 1 0.0119594931602478 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 34 SMO ENSG00000243230 ncRNA_intronic Human antisense chr7:128853100 chr7:128853113 . . 0 hm6A_associated_SNPs_10069 0 0 1 1 128853106 128853128 mRNA hsa-miR-143 SMO miRanda miRanda
14034 chr7 133749490 133749490 1 + T C rs189659030 133749482 + 133749462 133749502 41 GTACAGAGTGTTTTGGTTGAACAACTACTTTAATGCAGTCA GTACAGAGTGTTTTGGTTGAACAACTACCTTAATGCAGTCA < 41bp 1 0.21129877876406 1 0.895208358764648 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 EXOC4 ENSG00000131558 UTR3 Human protein_coding chr7:133749482 chr7:133749490 . . 0 hm6A_associated_SNPs_10093 0 0 1 1 133749481 133749501 mRNA hsa-miR-217 EXOC4 miRanda miRanda
14034 chr7 133750369 133750369 1 + G A rs148583207 133750365 + 133750345 133750385 41 GACTGGGCCACATCTTGAAAACTCGTGGAAAGGGAAAGGGG GACTGGGCCACATCTTGAAAACTCATGGAAAGGGAAAGGGG < 41bp 1 0.164924821542172 1 0.818788945674896 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 EXOC4 ENSG00000131558 UTR3 Human protein_coding chr7:133750365 chr7:133750369 . . 0 hm6A_associated_SNPs_10096 0 0 1 2 133750360 133750380 mRNA hsa-miR-204 EXOC4 miRanda miRanda
14034 chr7 133750369 133750369 1 + G A rs148583207 133750365 + 133750345 133750385 41 GACTGGGCCACATCTTGAAAACTCGTGGAAAGGGAAAGGGG GACTGGGCCACATCTTGAAAACTCATGGAAAGGGAAAGGGG < 41bp 1 0.164924821542172 1 0.818788945674896 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 EXOC4 ENSG00000131558 UTR3 Human protein_coding chr7:133750365 chr7:133750369 . . 0 hm6A_associated_SNPs_10096 0 0 1 2 133750360 133750380 mRNA hsa-miR-211 EXOC4 miRanda miRanda
14034 chr7 134653361 134653361 1 + A G rs111228789 134653343 + 134653323 134653363 41 ACCCATGCTGTGAAATAGAGACTTTTCTACTGATCATCATA ACCCATGCTGTGAAATAGAGACTTTTCTACTGATCATCGTA < 41bp 1 0.482980351918224 1 0.986082196235657 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653343 chr7:134653361 . . 0 hm6A_associated_SNPs_10108 0 0 1 1 134653359 134653380 mRNA hsa-miR-24 CALD1 miRanda miRanda
14034 chr7 134653361 134653361 1 + A G rs111228789 134653364 + 134653344 134653384 41 CTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGAT CTTTTCTACTGATCATCGTAACTCTGTATCTGAGCAGTGAT < 41bp 1 0.265025576434067 1 0.955523014068604 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653364 chr7:134653361 . . 0 hm6A_associated_SNPs_10109 0 0 1 1 134653359 134653380 mRNA hsa-miR-24 CALD1 miRanda miRanda
14034 chr7 134653930 134653930 1 + T A rs11204 134653947 + 134653927 134653967 41 TTTTATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT TTTAATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT < 41bp 1 0.432523641910631 1 0.00320905447006226 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653947 chr7:134653930 . . 0 hm6A_associated_SNPs_10111 0 0 1 3 134653919 134653942 mRNA hsa-miR-96 CALD1 miRanda miRanda
14034 chr7 134653930 134653930 1 + T A rs11204 134653947 + 134653927 134653967 41 TTTTATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT TTTAATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT < 41bp 1 0.432523641910631 1 0.00320905447006226 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653947 chr7:134653930 . . 0 hm6A_associated_SNPs_10111 0 0 1 3 134653919 134653942 mRNA hsa-miR-182 CALD1 miRanda miRanda
14034 chr7 134653930 134653930 1 + T A rs11204 134653947 + 134653927 134653967 41 TTTTATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT TTTAATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT < 41bp 1 0.432523641910631 1 0.00320905447006226 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653947 chr7:134653930 . . 0 hm6A_associated_SNPs_10111 0 0 1 3 134653921 134653942 mRNA hsa-miR-1271 CALD1 miRanda miRanda
14034 chr7 134653942 134653942 1 + C A rs2732898 134653947 + 134653927 134653967 41 TTTTATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT TTTTATATTTGCCAAAAGAAACATGGCAGATAGGTATCAAT < 41bp 1 0.418914074008114 1 0.00509563088417053 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653947 chr7:134653942 . . 0 hm6A_associated_SNPs_10112 0 0 0 3 134653919 134653942 mRNA hsa-miR-96 CALD1 miRanda miRanda
14034 chr7 134653942 134653942 1 + C A rs2732898 134653947 + 134653927 134653967 41 TTTTATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT TTTTATATTTGCCAAAAGAAACATGGCAGATAGGTATCAAT < 41bp 1 0.418914074008114 1 0.00509563088417053 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653947 chr7:134653942 . . 0 hm6A_associated_SNPs_10112 0 0 0 3 134653919 134653942 mRNA hsa-miR-182 CALD1 miRanda miRanda
14034 chr7 134653942 134653942 1 + C A rs2732898 134653947 + 134653927 134653967 41 TTTTATATTTGCCAACAGAAACATGGCAGATAGGTATCAAT TTTTATATTTGCCAAAAGAAACATGGCAGATAGGTATCAAT < 41bp 1 0.418914074008114 1 0.00509563088417053 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134653947 chr7:134653942 . . 0 hm6A_associated_SNPs_10112 0 0 0 3 134653921 134653942 mRNA hsa-miR-1271 CALD1 miRanda miRanda
14034 chr7 134654015 134654015 1 + G T rs140902346 134654026 + 134654006 134654046 41 TGAAAAGAAGAGAGATTAGAACTGTTAGAAGGAGTTGAAAT TGAAAAGAATAGAGATTAGAACTGTTAGAAGGAGTTGAAAT < 41bp 1 0.476126188982356 1 0.169956922531128 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 10 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134654026 chr7:134654015 . . 0 hm6A_associated_SNPs_10115 0 0 1 2 134654012 134654034 mRNA hsa-miR-139-5p CALD1 miRanda miRanda
14034 chr7 134654015 134654015 1 + G T rs140902346 134654026 + 134654006 134654046 41 TGAAAAGAAGAGAGATTAGAACTGTTAGAAGGAGTTGAAAT TGAAAAGAATAGAGATTAGAACTGTTAGAAGGAGTTGAAAT < 41bp 1 0.476126188982356 1 0.169956922531128 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 10 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134654026 chr7:134654015 . . 0 hm6A_associated_SNPs_10115 0 0 1 2 134654002 134654023 mRNA hsa-miR-216b CALD1 miRanda miRanda
14034 chr7 134655312 134655312 1 + C T rs138013249 134655302 + 134655282 134655322 41 CATTCCTAAAAATTTTATAAACACTTGATACTTTTCACTGA CATTCCTAAAAATTTTATAAACACTTGATATTTTTCACTGA < 41bp 1 0.367089302463427 1 0.358886182308197 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 CALD1 ENSG00000122786 UTR3 Human protein_coding chr7:134655302 chr7:134655312 . . 0 hm6A_associated_SNPs_10117 0 0 1 1 134655304 134655325 mRNA hsa-miR-361-5p CALD1 miRanda miRanda
14034 chr7 135333310 135333310 1 + C T rs114786864 135333300 + 135333280 135333320 41 CCTCTTGAGGATATCAAGGAACTGAGAGCCCGTGCTTATGC CCTCTTGAGGATATCAAGGAACTGAGAGCCTGTGCTTATGC < 41bp 1 0.529943988874832 1 0.790910005569458 experiment 0.940112022250336 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 31 NUP205 ENSG00000155561 UTR3 Human protein_coding chr7:135333300 chr7:135333310 . . 0 hm6A_associated_SNPs_10129 0 0 1 1 135333310 135333331 mRNA hsa-miR-376b NUP205 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-let-7a PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-let-7b PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-let-7c PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-let-7d PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-let-7e PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-let-7f PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-miR-98 PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359093 135359115 mRNA hsa-let-7g PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359092 135359115 mRNA hsa-let-7i PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359088 135359110 mRNA hsa-miR-190 PL-5283 miRanda miRanda
14034 chr7 135359102 135359102 1 + A G rs11538324 135359085 + 135359065 135359105 41 AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACAT AATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAGCAT < 41bp 1 0.711756430996042 1 0.757694244384766 experiment 0.576487138007917 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 C7orf73 ENSG00000243317 UTR3 Human protein_coding chr7:135359085 chr7:135359102 . . 0 hm6A_associated_SNPs_10130 0 0 1 11 135359088 135359110 mRNA hsa-miR-190b PL-5283 miRanda miRanda
14034 chr7 138269760 138269760 1 + G A rs562190661 138269768 + 138269748 138269788 41 AAACATTTGTCAGTAATTTAACATCACTACAAAAAGAAGAG AAACATTTGTCAATAATTTAACATCACTACAAAAAGAAGAG < 41bp 1 0.737145023921502 1 0.953291118144989 experiment 0.525709952156996 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 13 TRIM24 ENSG00000122779 UTR3 Human protein_coding chr7:138269768 chr7:138269760 . . 0 hm6A_associated_SNPs_10132 0 0 1 1 138269756 138269778 mRNA hsa-miR-142-3p TRIM24 miRanda miRanda
14034 chr7 138269801 138269801 1 + C G rs7790792 138269795 + 138269775 138269815 41 TACAAAAAGAAGAGTTTGTGACTATTCTCATCTCTGTTTTG TACAAAAAGAAGAGTTTGTGACTATTGTCATCTCTGTTTTG < 41bp 1 0.767195073411257 1 0.976531267166138 experiment 0.465609853177486 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 TRIM24 ENSG00000122779 UTR3 Human protein_coding chr7:138269795 chr7:138269801 . . 0 hm6A_associated_SNPs_10133 0 0 1 1 138269790 138269809 mRNA hsa-miR-143 TRIM24 miRanda miRanda
14034 chr7 139107919 139107919 1 + A G rs183009949 139107914 + 139107894 139107934 41 ATCACCACCACCATTATTAAACTGTAACTTGTCTAGTAAAT ATCACCACCACCATTATTAAACTGTGACTTGTCTAGTAAAT < 41bp 1 0.217591038933721 1 0.738240420818329 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 LOC100129148 ENSG00000146963 UTR3 Human protein_coding chr7:139107914 chr7:139107919 . . 0 hm6A_associated_SNPs_10139 0 0 1 4 139107900 139107921 mRNA hsa-miR-139-5p LUC7L2 miRanda miRanda
14034 chr7 139107919 139107919 1 + A G rs183009949 139107914 + 139107894 139107934 41 ATCACCACCACCATTATTAAACTGTAACTTGTCTAGTAAAT ATCACCACCACCATTATTAAACTGTGACTTGTCTAGTAAAT < 41bp 1 0.217591038933721 1 0.738240420818329 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 LOC100129148 ENSG00000146963 UTR3 Human protein_coding chr7:139107914 chr7:139107919 . . 0 hm6A_associated_SNPs_10139 0 0 1 4 139107919 139107942 mRNA hsa-miR-301a LUC7L2 miRanda miRanda
14034 chr7 139107919 139107919 1 + A G rs183009949 139107914 + 139107894 139107934 41 ATCACCACCACCATTATTAAACTGTAACTTGTCTAGTAAAT ATCACCACCACCATTATTAAACTGTGACTTGTCTAGTAAAT < 41bp 1 0.217591038933721 1 0.738240420818329 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 LOC100129148 ENSG00000146963 UTR3 Human protein_coding chr7:139107914 chr7:139107919 . . 0 hm6A_associated_SNPs_10139 0 0 1 4 139107919 139107942 mRNA hsa-miR-454 LUC7L2 miRanda miRanda
14034 chr7 139107919 139107919 1 + A G rs183009949 139107914 + 139107894 139107934 41 ATCACCACCACCATTATTAAACTGTAACTTGTCTAGTAAAT ATCACCACCACCATTATTAAACTGTGACTTGTCTAGTAAAT < 41bp 1 0.217591038933721 1 0.738240420818329 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 LOC100129148 ENSG00000146963 UTR3 Human protein_coding chr7:139107914 chr7:139107919 . . 0 hm6A_associated_SNPs_10139 0 0 1 4 139107919 139107942 mRNA hsa-miR-301b LUC7L2 miRanda miRanda
14034 chr7 140404746 140404746 1 + C T rs79658946 140404730 + 140404710 140404750 41 TATCCCTCCTGATGATGAAGACTGAAGGTGTAGACTCAGCC TATCCCTCCTGATGATGAAGACTGAAGGTGTAGACTTAGCC < 41bp 1 0.56334142208901 1 0.880594253540039 experiment 0.873317155821979 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 NDUFB2 ENSG00000090266 UTR3 Human protein_coding chr7:140404730 chr7:140404746 . . 0 hm6A_associated_SNPs_10144 0 0 1 3 140404737 140404759 mRNA hsa-miR-125a-3p NDUFB2 miRanda miRanda
14034 chr7 140404746 140404746 1 + C T rs79658946 140404730 + 140404710 140404750 41 TATCCCTCCTGATGATGAAGACTGAAGGTGTAGACTCAGCC TATCCCTCCTGATGATGAAGACTGAAGGTGTAGACTTAGCC < 41bp 1 0.56334142208901 1 0.880594253540039 experiment 0.873317155821979 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 NDUFB2 ENSG00000090266 UTR3 Human protein_coding chr7:140404730 chr7:140404746 . . 0 hm6A_associated_SNPs_10144 0 0 1 3 140404735 140404753 mRNA hsa-miR-485-5p NDUFB2 miRanda miRanda
14034 chr7 140404746 140404746 1 + C T rs79658946 140404730 + 140404710 140404750 41 TATCCCTCCTGATGATGAAGACTGAAGGTGTAGACTCAGCC TATCCCTCCTGATGATGAAGACTGAAGGTGTAGACTTAGCC < 41bp 1 0.56334142208901 1 0.880594253540039 experiment 0.873317155821979 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 NDUFB2 ENSG00000090266 UTR3 Human protein_coding chr7:140404730 chr7:140404746 . . 0 hm6A_associated_SNPs_10144 0 0 1 3 140404732 140404753 mRNA hsa-miR-485-5p NDUFB2 miRanda miRanda
14034 chr7 143003921 143003921 1 + C A rs190238617 143003935 + 143003915 143003955 41 TGATCACCCCCCTGCTTAGAACCCTTCTGCTTTCTATTACC TGATCAACCCCCTGCTTAGAACCCTTCTGCTTTCTATTACC < 41bp 1 0.132629897204145 1 0.000309914350509644 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 CASP2 ENSG00000106144 UTR3 Human protein_coding chr7:143003935 chr7:143003921 . . 0 hm6A_associated_SNPs_10156 0 0 1 1 143003900 143003922 mRNA hsa-miR-542-3p CASP2 miRanda miRanda
14034 chr7 148877605 148877605 1 + C T rs12704069 148877598 + 148877578 148877618 41 CTATACTGGCTTGATTTGAAACAGGCTCTTATTGCCATTTA CTATACTGGCTTGATTTGAAACAGGCTTTTATTGCCATTTA < 41bp 1 0.0684416028953853 1 0.0263555347919464 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 ZNF398 ENSG00000197024 UTR3 Human protein_coding chr7:148877598 chr7:148877605 . . 0 hm6A_associated_SNPs_10162 0 0 1 1 148877605 148877630 mRNA hsa-miR-544 ZNF398 miRanda miRanda
14034 chr7 148879281 148879281 1 + C G rs28420894 148879261 + 148879241 148879281 41 CGCAGTCCCTTCTGAAAGGAACTGTGTAGCCAGCAGGGACC CGCAGTCCCTTCTGAAAGGAACTGTGTAGCCAGCAGGGACG < 41bp 1 0.761576291551287 1 0.957425534725189 experiment 0.476847416897427 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 ZNF398 ENSG00000197024 UTR3 Human protein_coding chr7:148879261 chr7:148879281 . . 0 hm6A_associated_SNPs_10163 0 0 1 1 148879275 148879298 mRNA hsa-miR-129-5p ZNF398 miRanda miRanda
14034 chr7 148879281 148879281 1 + C G rs28420894 148879279 + 148879259 148879299 41 GAACTGTGTAGCCAGCAGGGACCTAAACTTTGGCAAAAAGT GAACTGTGTAGCCAGCAGGGACGTAAACTTTGGCAAAAAGT Direct Loss 1 0.686115977898426 1 0.938547849655151 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ZNF398 ENSG00000197024 UTR3 Human protein_coding chr7:148879279 chr7:148879281 . . 0 hm6A_associated_SNPs_10164 0 0 1 1 148879275 148879298 mRNA hsa-miR-129-5p ZNF398 miRanda miRanda
14034 chr7 148879285 148879285 1 + A T rs114218111 148879279 + 148879259 148879299 41 GAACTGTGTAGCCAGCAGGGACCTAAACTTTGGCAAAAAGT GAACTGTGTAGCCAGCAGGGACCTAATCTTTGGCAAAAAGT < 41bp 1 0.533277766625638 1 0.866858243942261 experiment 0.933444466748724 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 ZNF398 ENSG00000197024 UTR3 Human protein_coding chr7:148879279 chr7:148879285 . . 0 hm6A_associated_SNPs_10165 0 0 1 1 148879275 148879298 mRNA hsa-miR-129-5p ZNF398 miRanda miRanda
14034 chr7 149577207 149577207 1 + C T rs112810643 149577214 + 149577194 149577234 41 CTCATGGCAGCATCTAAGTGACCAGAGCTGGGATGAGAGAG CTCATGGCAGCATTTAAGTGACCAGAGCTGGGATGAGAGAG < 41bp 1 0.589157500665905 1 0.485699385404587 experiment 0.82168499866819 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ATP6V0E2 ENSG00000204934 ncRNA_intronic Human antisense chr7:149577214 chr7:149577207 . . 0 hm6A_associated_SNPs_10184 0 0 1 1 149577188 149577210 mRNA hsa-miR-155 ATP6V0E2 miRanda miRanda
14034 chr7 149577674 149577674 1 + C A rs75281663 149577665 + 149577645 149577685 41 CAGGCTGGGGCCTCCCATTGACATCCTCCCCCTACACTCCC CAGGCTGGGGCCTCCCATTGACATCCTCCACCTACACTCCC < 41bp 1 0.744639298925257 1 0.685959458351135 experiment 0.510721402149486 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ATP6V0E2 ENSG00000204934 ncRNA_exonic Human antisense chr7:149577665 chr7:149577674 . . 0 hm6A_associated_SNPs_10186 0 0 1 1 149577662 149577685 mRNA hsa-miR-122 ATP6V0E2 miRanda miRanda
14034 chr7 150270340 150270340 1 + A G rs12669961 150270334 + 150270314 150270354 41 ACAAATTTTCAATTTGTGAAACTCCAAAGCAGAAAGTATTG ACAAATTTTCAATTTGTGAAACTCCAGAGCAGAAAGTATTG < 41bp 1 0.152145866367269 1 0.693690180778503 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 GIMAP4 ENSG00000133574 UTR3 Human protein_coding chr7:150270334 chr7:150270340 . . 0 hm6A_associated_SNPs_10210 0 0 0 3 150270339 150270360 mRNA hsa-miR-29a GIMAP4 miRanda miRanda
14034 chr7 150270340 150270340 1 + A G rs12669961 150270334 + 150270314 150270354 41 ACAAATTTTCAATTTGTGAAACTCCAAAGCAGAAAGTATTG ACAAATTTTCAATTTGTGAAACTCCAGAGCAGAAAGTATTG < 41bp 1 0.152145866367269 1 0.693690180778503 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 GIMAP4 ENSG00000133574 UTR3 Human protein_coding chr7:150270334 chr7:150270340 . . 0 hm6A_associated_SNPs_10210 0 0 0 3 150270338 150270360 mRNA hsa-miR-29b GIMAP4 miRanda miRanda
14034 chr7 150270340 150270340 1 + A G rs12669961 150270334 + 150270314 150270354 41 ACAAATTTTCAATTTGTGAAACTCCAAAGCAGAAAGTATTG ACAAATTTTCAATTTGTGAAACTCCAGAGCAGAAAGTATTG < 41bp 1 0.152145866367269 1 0.693690180778503 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 GIMAP4 ENSG00000133574 UTR3 Human protein_coding chr7:150270334 chr7:150270340 . . 0 hm6A_associated_SNPs_10210 0 0 0 3 150270339 150270360 mRNA hsa-miR-29c GIMAP4 miRanda miRanda
14034 chr7 151046195 151046195 1 + T G rs146523163 151046181 + 151046161 151046201 41 CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCTGTGAAA CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCGGTGAAA < 41bp 1 0.653671603801122 1 0.248914688825607 experiment 0.692656792397756 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 35 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046181 chr7:151046195 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_10218 0 0 1 3 151046180 151046200 mRNA hsa-miR-27a NUB1 miRanda miRanda
14034 chr7 151046195 151046195 1 + T G rs146523163 151046181 + 151046161 151046201 41 CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCTGTGAAA CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCGGTGAAA < 41bp 1 0.653671603801122 1 0.248914688825607 experiment 0.692656792397756 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 35 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046181 chr7:151046195 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_10218 0 0 1 3 151046187 151046209 mRNA hsa-miR-205 NUB1 miRanda miRanda
14034 chr7 151046195 151046195 1 + T G rs146523163 151046181 + 151046161 151046201 41 CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCTGTGAAA CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCGGTGAAA < 41bp 1 0.653671603801122 1 0.248914688825607 experiment 0.692656792397756 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 35 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046181 chr7:151046195 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_10218 0 0 1 3 151046180 151046200 mRNA hsa-miR-27b NUB1 miRanda miRanda
14034 chr7 151052897 151052897 1 + G A rs17173104 151052909 + 151052889 151052929 41 GTGAAAGCGATGGTGCTTGAACTAAAACAATCTGAAGAGGA GTGAAAGCAATGGTGCTTGAACTAAAACAATCTGAAGAGGA < 41bp 1 0.566800308247071 1 0.722025156021118 experiment 0.866399383505858 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052909 chr7:151052897 synonymous SNV . 0 hm6A_associated_SNPs_10219 0 0 1 3 151052885 151052906 mRNA hsa-miR-29a NUB1 miRanda miRanda
14034 chr7 151052897 151052897 1 + G A rs17173104 151052909 + 151052889 151052929 41 GTGAAAGCGATGGTGCTTGAACTAAAACAATCTGAAGAGGA GTGAAAGCAATGGTGCTTGAACTAAAACAATCTGAAGAGGA < 41bp 1 0.566800308247071 1 0.722025156021118 experiment 0.866399383505858 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052909 chr7:151052897 synonymous SNV . 0 hm6A_associated_SNPs_10219 0 0 1 3 151052885 151052906 mRNA hsa-miR-29b NUB1 miRanda miRanda
14034 chr7 151052897 151052897 1 + G A rs17173104 151052909 + 151052889 151052929 41 GTGAAAGCGATGGTGCTTGAACTAAAACAATCTGAAGAGGA GTGAAAGCAATGGTGCTTGAACTAAAACAATCTGAAGAGGA < 41bp 1 0.566800308247071 1 0.722025156021118 experiment 0.866399383505858 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052909 chr7:151052897 synonymous SNV . 0 hm6A_associated_SNPs_10219 0 0 1 3 151052885 151052906 mRNA hsa-miR-29c NUB1 miRanda miRanda
14034 chr7 151052897 151052897 1 + G A rs17173104 151052915 + 151052895 151052935 41 GCGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG GCAATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG < 41bp 1 0.770194693780138 1 0.352528601884842 experiment 0.459610612439723 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052915 chr7:151052897 synonymous SNV . 0 hm6A_associated_SNPs_10220 0 0 1 3 151052885 151052906 mRNA hsa-miR-29a NUB1 miRanda miRanda
14034 chr7 151052897 151052897 1 + G A rs17173104 151052915 + 151052895 151052935 41 GCGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG GCAATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG < 41bp 1 0.770194693780138 1 0.352528601884842 experiment 0.459610612439723 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052915 chr7:151052897 synonymous SNV . 0 hm6A_associated_SNPs_10220 0 0 1 3 151052885 151052906 mRNA hsa-miR-29b NUB1 miRanda miRanda
14034 chr7 151052897 151052897 1 + G A rs17173104 151052915 + 151052895 151052935 41 GCGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG GCAATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG < 41bp 1 0.770194693780138 1 0.352528601884842 experiment 0.459610612439723 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052915 chr7:151052897 synonymous SNV . 0 hm6A_associated_SNPs_10220 0 0 1 3 151052885 151052906 mRNA hsa-miR-29c NUB1 miRanda miRanda
14034 chr7 151819022 151819022 1 + G T rs3778921 151819009 + 151818989 151819029 41 AGTGAGTATGTTTCACCTGGACATTAAGGTGATGTTTGAGC AGTGAGTATGTTTCACCTGGACATTAAGGTGATTTTTGAGC < 41bp 1 0.678996626284898 1 0.937448859214783 experiment 0.642006747430204 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 GALNT11 ENSG00000178234 UTR3 Human protein_coding chr7:151819009 chr7:151819022 . . 0 hm6A_associated_SNPs_10226 0 0 1 1 151819010 151819029 mRNA hsa-miR-371-5p GALNT11 miRanda miRanda
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161882 152161904 lncRNA hsa-miR-126-3p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161866 152161888 lncRNA hsa-miR-106a-5p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161867 152161888 lncRNA hsa-miR-106b-5p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161866 152161888 lncRNA hsa-miR-17-5p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161866 152161888 lncRNA hsa-miR-20a-5p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161866 152161888 lncRNA hsa-miR-20b-5p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161867 152161888 lncRNA hsa-miR-519d-3p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161867 152161888 lncRNA hsa-miR-526b-3p LINC01003 miRanda starBase2
14034 chr7 152161888 152161888 1 + C G rs551794147 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTGTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.316927514477047 1 0.891291499137878 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161888 . . 0 hm6A_associated_SNPs_10227 0 0 1 9 152161866 152161888 lncRNA hsa-miR-93-5p LINC01003 miRanda starBase2
14034 chr7 152161892 152161892 1 + C G rs558362014 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTCTCCGTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.317200209327147 1 0.925511956214905 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161892 . . 0 hm6A_associated_SNPs_10228 0 0 0 1 152161882 152161904 lncRNA hsa-miR-126-3p LINC01003 miRanda starBase2
14034 chr7 152161894 152161894 1 + C G rs139677904 152161905 + 152161885 152161925 41 TTTCTCCCTCTCCGGTACGGACCGCGGCGTTCTGTTTCCAG TTTCTCCCTGTCCGGTACGGACCGCGGCGTTCTGTTTCCAG < 41bp 1 0.304258304210923 1 0.879297733306885 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161905 chr7:152161894 . . 0 hm6A_associated_SNPs_10229 0 0 0 1 152161882 152161904 lncRNA hsa-miR-126-3p LINC01003 miRanda starBase2
14034 chr7 152162492 152162492 1 + C T rs114246678 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGTAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0569864042758791 1 0.217142432928085 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162492 . . 0 hm6A_associated_SNPs_10231 0 0 0 6 152162485 152162504 mRNA hsa-miR-33a LOC100128822 miRanda miRanda
14034 chr7 152162492 152162492 1 + C T rs114246678 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGTAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0569864042758791 1 0.217142432928085 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162492 . . 0 hm6A_associated_SNPs_10231 0 0 0 6 152162476 152162494 mRNA hsa-miR-448 LOC100128822 miRanda miRanda
14034 chr7 152162492 152162492 1 + C T rs114246678 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGTAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0569864042758791 1 0.217142432928085 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162492 . . 0 hm6A_associated_SNPs_10231 0 0 0 6 152162486 152162504 mRNA hsa-miR-33b LOC100128822 miRanda miRanda
14034 chr7 152162492 152162492 1 + C T rs114246678 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGTAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0569864042758791 1 0.217142432928085 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162492 . . 0 hm6A_associated_SNPs_10231 0 0 0 6 152162485 152162504 lncRNA hsa-miR-33a-5p LINC01003 miRanda starBase2
14034 chr7 152162492 152162492 1 + C T rs114246678 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGTAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0569864042758791 1 0.217142432928085 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162492 . . 0 hm6A_associated_SNPs_10231 0 0 0 6 152162486 152162504 lncRNA hsa-miR-33b-5p LINC01003 miRanda starBase2
14034 chr7 152162492 152162492 1 + C T rs114246678 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGTAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0569864042758791 1 0.217142432928085 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162492 . . 0 hm6A_associated_SNPs_10231 0 0 0 6 152162476 152162494 lncRNA hsa-miR-448 LINC01003 miRanda starBase2
14034 chr7 152162501 152162501 1 + G A rs114826953 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGCAAAGCAATACATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0571338403524111 1 0.213840395212173 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162501 . . 0 hm6A_associated_SNPs_10232 0 0 0 4 152162485 152162504 mRNA hsa-miR-33a LOC100128822 miRanda miRanda
14034 chr7 152162501 152162501 1 + G A rs114826953 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGCAAAGCAATACATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0571338403524111 1 0.213840395212173 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162501 . . 0 hm6A_associated_SNPs_10232 0 0 0 4 152162486 152162504 mRNA hsa-miR-33b LOC100128822 miRanda miRanda
14034 chr7 152162501 152162501 1 + G A rs114826953 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGCAAAGCAATACATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0571338403524111 1 0.213840395212173 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162501 . . 0 hm6A_associated_SNPs_10232 0 0 0 4 152162485 152162504 lncRNA hsa-miR-33a-5p LINC01003 miRanda starBase2
14034 chr7 152162501 152162501 1 + G A rs114826953 152162508 + 152162488 152162528 41 TATGCAAAGCAATGCATGTAACATTTTCATTACTTTGCAAG TATGCAAAGCAATACATGTAACATTTTCATTACTTTGCAAG < 41bp 1 0.0571338403524111 1 0.213840395212173 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152162508 chr7:152162501 . . 0 hm6A_associated_SNPs_10232 0 0 0 4 152162486 152162504 lncRNA hsa-miR-33b-5p LINC01003 miRanda starBase2
14034 chr7 155255416 155255416 1 + G A rs192274449 155255421 + 155255401 155255441 41 CAGGTCTCAGTCCGCGCTAAACAATGCAATAATTTAAAATC CAGGTCTCAGTCCGCACTAAACAATGCAATAATTTAAAATC < 41bp 1 0.710760439681346 1 0.994903802871704 experiment 0.578479120637309 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 EN2 ENSG00000164778 UTR3 Human protein_coding chr7:155255421 chr7:155255416 . . 0 hm6A_associated_SNPs_10247 0 0 1 2 155255406 155255429 mRNA hsa-miR-33a EN2 miRanda miRanda
14034 chr7 155255416 155255416 1 + G A rs192274449 155255421 + 155255401 155255441 41 CAGGTCTCAGTCCGCGCTAAACAATGCAATAATTTAAAATC CAGGTCTCAGTCCGCACTAAACAATGCAATAATTTAAAATC < 41bp 1 0.710760439681346 1 0.994903802871704 experiment 0.578479120637309 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 EN2 ENSG00000164778 UTR3 Human protein_coding chr7:155255421 chr7:155255416 . . 0 hm6A_associated_SNPs_10247 0 0 1 2 155255411 155255429 mRNA hsa-miR-33b EN2 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808651 + 156808631 156808671 41 CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGCAG CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGTAG < 41bp 1 0.598785259699929 1 0.95688259601593 experiment 0.802429480600143 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808651 chr7:156808669 . . 0 hm6A_associated_SNPs_10260 0 0 1 5 156808662 156808685 mRNA hsa-let-7d LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808651 + 156808631 156808671 41 CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGCAG CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGTAG < 41bp 1 0.598785259699929 1 0.95688259601593 experiment 0.802429480600143 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808651 chr7:156808669 . . 0 hm6A_associated_SNPs_10260 0 0 1 5 156808645 156808670 mRNA hsa-miR-103 LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808651 + 156808631 156808671 41 CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGCAG CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGTAG < 41bp 1 0.598785259699929 1 0.95688259601593 experiment 0.802429480600143 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808651 chr7:156808669 . . 0 hm6A_associated_SNPs_10260 0 0 1 5 156808645 156808670 mRNA hsa-miR-107 LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808651 + 156808631 156808671 41 CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGCAG CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGTAG < 41bp 1 0.598785259699929 1 0.95688259601593 experiment 0.802429480600143 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808651 chr7:156808669 . . 0 hm6A_associated_SNPs_10260 0 0 1 5 156808664 156808685 mRNA hsa-let-7g LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808651 + 156808631 156808671 41 CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGCAG CAAACACATGCATAAGCTGGACTTTTCCCAGAATGCTGTAG < 41bp 1 0.598785259699929 1 0.95688259601593 experiment 0.802429480600143 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 39 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808651 chr7:156808669 . . 0 hm6A_associated_SNPs_10260 0 0 1 5 156808664 156808685 mRNA hsa-let-7i LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808676 + 156808656 156808696 41 TCCCAGAATGCTGCAGCAGAACTACCCTCCAGATAGACACT TCCCAGAATGCTGTAGCAGAACTACCCTCCAGATAGACACT < 41bp 1 0.427403323637552 1 0.860901355743408 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808676 chr7:156808669 . . 0 hm6A_associated_SNPs_10261 0 0 1 5 156808662 156808685 mRNA hsa-let-7d LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808676 + 156808656 156808696 41 TCCCAGAATGCTGCAGCAGAACTACCCTCCAGATAGACACT TCCCAGAATGCTGTAGCAGAACTACCCTCCAGATAGACACT < 41bp 1 0.427403323637552 1 0.860901355743408 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808676 chr7:156808669 . . 0 hm6A_associated_SNPs_10261 0 0 1 5 156808645 156808670 mRNA hsa-miR-103 LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808676 + 156808656 156808696 41 TCCCAGAATGCTGCAGCAGAACTACCCTCCAGATAGACACT TCCCAGAATGCTGTAGCAGAACTACCCTCCAGATAGACACT < 41bp 1 0.427403323637552 1 0.860901355743408 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808676 chr7:156808669 . . 0 hm6A_associated_SNPs_10261 0 0 1 5 156808645 156808670 mRNA hsa-miR-107 LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808676 + 156808656 156808696 41 TCCCAGAATGCTGCAGCAGAACTACCCTCCAGATAGACACT TCCCAGAATGCTGTAGCAGAACTACCCTCCAGATAGACACT < 41bp 1 0.427403323637552 1 0.860901355743408 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808676 chr7:156808669 . . 0 hm6A_associated_SNPs_10261 0 0 1 5 156808664 156808685 mRNA hsa-let-7g LOC645249 miRanda miRanda
14034 chr7 156808669 156808669 1 + C T rs185963255 156808676 + 156808656 156808696 41 TCCCAGAATGCTGCAGCAGAACTACCCTCCAGATAGACACT TCCCAGAATGCTGTAGCAGAACTACCCTCCAGATAGACACT < 41bp 1 0.427403323637552 1 0.860901355743408 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 MNX1-AS1 ENSG00000243479 ncRNA_exonic Human lincRNA chr7:156808676 chr7:156808669 . . 0 hm6A_associated_SNPs_10261 0 0 1 5 156808664 156808685 mRNA hsa-let-7i LOC645249 miRanda miRanda
14034 chr7 157061757 157061757 1 + A G rs78004192 157061742 + 157061722 157061762 41 AGCTGAATGACACTTTTAAGACAATGAACATTATCAAAACA AGCTGAATGACACTTTTAAGACAATGAACATTATCGAAACA < 41bp 1 0.485685058671385 1 0.464890688657761 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 UBE3C ENSG00000009335 UTR3 Human protein_coding chr7:157061742 chr7:157061757 . . 0 hm6A_associated_SNPs_10265 0 0 1 2 157061736 157061758 mRNA hsa-miR-203 UBE3C miRanda miRanda
14034 chr7 157061757 157061757 1 + A G rs78004192 157061742 + 157061722 157061762 41 AGCTGAATGACACTTTTAAGACAATGAACATTATCAAAACA AGCTGAATGACACTTTTAAGACAATGAACATTATCGAAACA < 41bp 1 0.485685058671385 1 0.464890688657761 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 UBE3C ENSG00000009335 UTR3 Human protein_coding chr7:157061742 chr7:157061757 . . 0 hm6A_associated_SNPs_10265 0 0 1 2 157061735 157061757 mRNA hsa-miR-190 UBE3C miRanda miRanda
14034 chr7 157061757 157061757 1 + A G rs78004192 157061749 + 157061729 157061769 41 TGACACTTTTAAGACAATGAACATTATCAAAACAAAATGTA TGACACTTTTAAGACAATGAACATTATCGAAACAAAATGTA < 41bp 1 0.474939666508206 1 0.641069054603577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 29 UBE3C ENSG00000009335 UTR3 Human protein_coding chr7:157061749 chr7:157061757 . . 0 hm6A_associated_SNPs_10266 0 0 1 2 157061736 157061758 mRNA hsa-miR-203 UBE3C miRanda miRanda
14034 chr7 157061757 157061757 1 + A G rs78004192 157061749 + 157061729 157061769 41 TGACACTTTTAAGACAATGAACATTATCAAAACAAAATGTA TGACACTTTTAAGACAATGAACATTATCGAAACAAAATGTA < 41bp 1 0.474939666508206 1 0.641069054603577 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 29 UBE3C ENSG00000009335 UTR3 Human protein_coding chr7:157061749 chr7:157061757 . . 0 hm6A_associated_SNPs_10266 0 0 1 2 157061735 157061757 mRNA hsa-miR-190 UBE3C miRanda miRanda
14034 chr7 157061757 157061757 1 + A G rs78004192 157061760 + 157061740 157061780 41 AGACAATGAACATTATCAAAACAAAATGTATAATTTCTTAA AGACAATGAACATTATCGAAACAAAATGTATAATTTCTTAA < 41bp 1 0.297750578284567 1 0.203247666358948 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 UBE3C ENSG00000009335 UTR3 Human protein_coding chr7:157061760 chr7:157061757 . . 0 hm6A_associated_SNPs_10267 0 0 1 2 157061736 157061758 mRNA hsa-miR-203 UBE3C miRanda miRanda
14034 chr7 157061757 157061757 1 + A G rs78004192 157061760 + 157061740 157061780 41 AGACAATGAACATTATCAAAACAAAATGTATAATTTCTTAA AGACAATGAACATTATCGAAACAAAATGTATAATTTCTTAA < 41bp 1 0.297750578284567 1 0.203247666358948 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 UBE3C ENSG00000009335 UTR3 Human protein_coding chr7:157061760 chr7:157061757 . . 0 hm6A_associated_SNPs_10267 0 0 1 2 157061735 157061757 mRNA hsa-miR-190 UBE3C miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178425 157178446 mRNA hsa-miR-200b TMEM135 miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178425 157178446 mRNA hsa-miR-200b DNAJB6 miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178424 157178446 mRNA hsa-miR-200c TMEM135 miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178424 157178446 mRNA hsa-miR-200c DNAJB6 miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178425 157178446 mRNA hsa-miR-429 TMEM135 miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178425 157178446 mRNA hsa-miR-429 DNAJB6 miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178420 157178441 mRNA hsa-miR-488 TMEM135 miRanda miRanda
14034 chr7 157178432 157178432 1 + C T rs568083129 157178429 + 157178409 157178449 41 TTTTTGAAGATTTCAAACGAACTCGACTTTCAGTATAATTG TTTTTGAAGATTTCAAACGAACTTGACTTTCAGTATAATTG < 41bp 1 0.6557675532578 1 0.99759578704834 experiment 0.6884648934844 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157178429 chr7:157178432 . . 0 hm6A_associated_SNPs_10271 0 0 0 8 157178420 157178441 mRNA hsa-miR-488 DNAJB6 miRanda miRanda
14034 chr7 157209758 157209758 1 + C G rs143332396 157209740 + 157209720 157209760 41 AGAATTCCAGGGCTGCCTTGACTTCTTCCCTGCATGCTCCC AGAATTCCAGGGCTGCCTTGACTTCTTCCCTGCATGCTGCC < 41bp 1 0.148777956391624 1 0.396975964307785 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157209740 chr7:157209758 . . 0 hm6A_associated_SNPs_10272 0 0 1 1 157209753 157209773 mRNA hsa-miR-224 DNAJB6 miRanda miRanda
14034 chr8 6303961 6303961 1 + A G rs138771570 6303952 + 6303932 6303972 41 AGCGTTTGAAATCATCACAGACATGTTACATACCTTTTCCT AGCGTTTGAAATCATCACAGACATGTTACGTACCTTTTCCT < 41bp 1 0.0732942884655242 1 0.430815100669861 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 MCPH1 ENSG00000147316 UTR3 Human protein_coding chr8:6303952 chr8:6303961 . . 0 hm6A_associated_SNPs_10308 0 0 0 2 6303944 6303967 mRNA hsa-miR-196a MCPH1 miRanda miRanda
14034 chr8 6303961 6303961 1 + A G rs138771570 6303952 + 6303932 6303972 41 AGCGTTTGAAATCATCACAGACATGTTACATACCTTTTCCT AGCGTTTGAAATCATCACAGACATGTTACGTACCTTTTCCT < 41bp 1 0.0732942884655242 1 0.430815100669861 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 MCPH1 ENSG00000147316 UTR3 Human protein_coding chr8:6303952 chr8:6303961 . . 0 hm6A_associated_SNPs_10308 0 0 0 2 6303944 6303967 mRNA hsa-miR-196b MCPH1 miRanda miRanda
14034 chr8 6615067 6615067 1 + A G rs73661471 6615081 + 6615061 6615101 41 TATGCAATGGTCTTGGGCAAACATACCTGGTTGTACAACTT TATGCAGTGGTCTTGGGCAAACATACCTGGTTGTACAACTT < 41bp 1 0.68112772955519 1 0.245064288377762 experiment 0.63774454088962 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 7 AGPAT5 ENSG00000155189 UTR3 Human protein_coding chr8:6615081 chr8:6615067 . . 0 hm6A_associated_SNPs_10311 0 0 1 1 6615045 6615067 mRNA hsa-miR-448 AGPAT5 miRanda miRanda
14034 chr8 6615275 6615275 1 + A G rs531747057 6615291 + 6615271 6615311 41 TTTCAATTTATTACAACTTGACAGCTCCAAGCTCTTATTAC TTTCGATTTATTACAACTTGACAGCTCCAAGCTCTTATTAC < 41bp 1 0.345415919244417 1 0.0144008994102478 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 AGPAT5 ENSG00000155189 UTR3 Human protein_coding chr8:6615291 chr8:6615275 . . 0 hm6A_associated_SNPs_10316 0 0 1 1 6615273 6615290 mRNA hsa-miR-382 AGPAT5 miRanda miRanda
14034 chr8 8890232 8890232 1 + A G rs529958641 8890233 + 8890213 8890253 41 CCCCAAAATGATAATGCAAAACAGAATAATTTGGAGACCAG CCCCAAAATGATAATGCAAGACAGAATAATTTGGAGACCAG < 41bp 1 0.55666277181212 1 0.837364912033081 experiment 0.88667445637576 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890233 chr8:8890232 . . 0 hm6A_associated_SNPs_10338 0 0 0 1 8890215 8890235 mRNA hsa-miR-129-5p ERI1 miRanda miRanda
14034 chr8 8890232 8890232 1 + A G rs529958641 8890249 + 8890229 8890269 41 CAAAACAGAATAATTTGGAGACCAGGAGAAAAACTGGTATG CAAGACAGAATAATTTGGAGACCAGGAGAAAAACTGGTATG < 41bp 1 0.189384111675341 1 0.83750593662262 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890249 chr8:8890232 . . 0 hm6A_associated_SNPs_10339 0 0 0 1 8890215 8890235 mRNA hsa-miR-129-5p ERI1 miRanda miRanda
14034 chr8 8890468 8890468 1 + C G rs145487375 8890467 + 8890447 8890487 41 AGAAGTATATGCTCCTCGAGACCAGAGACTGTGACTTCTGC AGAAGTATATGCTCCTCGAGAGCAGAGACTGTGACTTCTGC Direct Loss 1 0.333139187515287 1 0.975259900093079 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890467 chr8:8890468 . . 0 hm6A_associated_SNPs_10343 0 0 1 3 8890461 8890481 mRNA hsa-miR-27a ERI1 miRanda miRanda
14034 chr8 8890468 8890468 1 + C G rs145487375 8890467 + 8890447 8890487 41 AGAAGTATATGCTCCTCGAGACCAGAGACTGTGACTTCTGC AGAAGTATATGCTCCTCGAGAGCAGAGACTGTGACTTCTGC Direct Loss 1 0.333139187515287 1 0.975259900093079 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890467 chr8:8890468 . . 0 hm6A_associated_SNPs_10343 0 0 1 3 8890461 8890484 mRNA hsa-miR-224 ERI1 miRanda miRanda
14034 chr8 8890468 8890468 1 + C G rs145487375 8890467 + 8890447 8890487 41 AGAAGTATATGCTCCTCGAGACCAGAGACTGTGACTTCTGC AGAAGTATATGCTCCTCGAGAGCAGAGACTGTGACTTCTGC Direct Loss 1 0.333139187515287 1 0.975259900093079 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 22 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890467 chr8:8890468 . . 0 hm6A_associated_SNPs_10343 0 0 1 3 8890463 8890481 mRNA hsa-miR-27b ERI1 miRanda miRanda
14034 chr8 8890468 8890468 1 + C G rs145487375 8890474 + 8890454 8890494 41 TATGCTCCTCGAGACCAGAGACTGTGACTTCTGCATCTTTG TATGCTCCTCGAGAGCAGAGACTGTGACTTCTGCATCTTTG < 41bp 1 0.593336758500139 1 0.9906245470047 experiment 0.813326482999721 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 15 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890474 chr8:8890468 . . 0 hm6A_associated_SNPs_10344 0 0 1 3 8890461 8890481 mRNA hsa-miR-27a ERI1 miRanda miRanda
14034 chr8 8890468 8890468 1 + C G rs145487375 8890474 + 8890454 8890494 41 TATGCTCCTCGAGACCAGAGACTGTGACTTCTGCATCTTTG TATGCTCCTCGAGAGCAGAGACTGTGACTTCTGCATCTTTG < 41bp 1 0.593336758500139 1 0.9906245470047 experiment 0.813326482999721 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 15 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890474 chr8:8890468 . . 0 hm6A_associated_SNPs_10344 0 0 1 3 8890461 8890484 mRNA hsa-miR-224 ERI1 miRanda miRanda
14034 chr8 8890468 8890468 1 + C G rs145487375 8890474 + 8890454 8890494 41 TATGCTCCTCGAGACCAGAGACTGTGACTTCTGCATCTTTG TATGCTCCTCGAGAGCAGAGACTGTGACTTCTGCATCTTTG < 41bp 1 0.593336758500139 1 0.9906245470047 experiment 0.813326482999721 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 15 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890474 chr8:8890468 . . 0 hm6A_associated_SNPs_10344 0 0 1 3 8890463 8890481 mRNA hsa-miR-27b ERI1 miRanda miRanda
14034 chr8 8890550 8890550 1 + A G rs111435503 8890557 + 8890537 8890577 41 CCAGCGTTGATACATGAAGGACAGCATTACATCTTTTTTCT CCAGCGTTGATACGTGAAGGACAGCATTACATCTTTTTTCT < 41bp 1 0.575577221883634 1 0.960244297981262 experiment 0.848845556232733 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890557 chr8:8890550 . . 0 hm6A_associated_SNPs_10345 0 0 0 2 8890531 8890557 mRNA hsa-miR-205 ERI1 miRanda miRanda
14034 chr8 8890550 8890550 1 + A G rs111435503 8890557 + 8890537 8890577 41 CCAGCGTTGATACATGAAGGACAGCATTACATCTTTTTTCT CCAGCGTTGATACGTGAAGGACAGCATTACATCTTTTTTCT < 41bp 1 0.575577221883634 1 0.960244297981262 experiment 0.848845556232733 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890557 chr8:8890550 . . 0 hm6A_associated_SNPs_10345 0 0 0 2 8890544 8890566 mRNA hsa-miR-155 ERI1 miRanda miRanda
14034 chr8 11683653 11683653 1 + T C rs904011 11683666 + 11683646 11683686 41 CCTGTTTTTGCAGAAAACAAACATCATCCGTGACTATCTGG CCTGTTTCTGCAGAAAACAAACATCATCCGTGACTATCTGG < 41bp 1 0.778794108992264 1 0.890621662139893 experiment 0.442411782015473 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11683666 chr8:11683653 synonymous SNV . 0 hm6A_associated_SNPs_10367 0 0 1 3 11683652 11683674 mRNA hsa-miR-190 FDFT1 miRanda miRanda
14034 chr8 11683653 11683653 1 + T C rs904011 11683666 + 11683646 11683686 41 CCTGTTTTTGCAGAAAACAAACATCATCCGTGACTATCTGG CCTGTTTCTGCAGAAAACAAACATCATCCGTGACTATCTGG < 41bp 1 0.778794108992264 1 0.890621662139893 experiment 0.442411782015473 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11683666 chr8:11683653 synonymous SNV . 0 hm6A_associated_SNPs_10367 0 0 1 3 11683640 11683661 mRNA hsa-miR-544 FDFT1 miRanda miRanda
14034 chr8 11683653 11683653 1 + T C rs904011 11683666 + 11683646 11683686 41 CCTGTTTTTGCAGAAAACAAACATCATCCGTGACTATCTGG CCTGTTTCTGCAGAAAACAAACATCATCCGTGACTATCTGG < 41bp 1 0.778794108992264 1 0.890621662139893 experiment 0.442411782015473 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11683666 chr8:11683653 synonymous SNV . 0 hm6A_associated_SNPs_10367 0 0 1 3 11683653 11683674 mRNA hsa-miR-190b FDFT1 miRanda miRanda
14034 chr8 11696061 11696061 1 + G A rs10089896 11696068 + 11696048 11696088 41 CCCTGAGCTGGCAGTACCTGACCACTCTCTCCCAGGTAACA CCCTGAGCTGGCAATACCTGACCACTCTCTCCCAGGTAACA < 41bp 1 0.521991938701585 1 0.768576741218567 experiment 0.956016122596829 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 14 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11696068 chr8:11696061 synonymous SNV . 0 hm6A_associated_SNPs_10370 0 0 1 1 11696058 11696080 mRNA hsa-miR-185 FDFT1 miRanda miRanda
14034 chr8 15621763 15621763 1 + A G rs112569707 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC GTGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC < 41bp 1 0.345742729590184 1 0.418858289718628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621763 . . 0 hm6A_associated_SNPs_10374 0 0 1 4 15621749 15621770 mRNA hsa-miR-205 TUSC3 miRanda miRanda
14034 chr8 15621763 15621763 1 + A G rs112569707 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC GTGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC < 41bp 1 0.345742729590184 1 0.418858289718628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621763 . . 0 hm6A_associated_SNPs_10374 0 0 1 4 15621759 15621779 mRNA hsa-miR-212 TUSC3 miRanda miRanda
14034 chr8 15621763 15621763 1 + A G rs112569707 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC GTGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC < 41bp 1 0.345742729590184 1 0.418858289718628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621763 . . 0 hm6A_associated_SNPs_10374 0 0 1 4 15621758 15621779 mRNA hsa-miR-132 TUSC3 miRanda miRanda
14034 chr8 15621763 15621763 1 + A G rs112569707 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC GTGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC < 41bp 1 0.345742729590184 1 0.418858289718628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621763 . . 0 hm6A_associated_SNPs_10374 0 0 1 4 15621758 15621781 mRNA hsa-miR-194 TUSC3 miRanda miRanda
14034 chr8 15621780 15621780 1 + C A rs556086183 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC ATGAAGATAAACTGTTCATGACTTTATACTATTTTGAATTC < 41bp 1 0.358864603358756 1 0.514511585235596 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621780 . . 0 hm6A_associated_SNPs_10375 0 0 1 5 15621767 15621787 mRNA hsa-miR-224 TUSC3 miRanda miRanda
14034 chr8 15621780 15621780 1 + C A rs556086183 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC ATGAAGATAAACTGTTCATGACTTTATACTATTTTGAATTC < 41bp 1 0.358864603358756 1 0.514511585235596 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621780 . . 0 hm6A_associated_SNPs_10375 0 0 1 5 15621775 15621795 mRNA hsa-miR-144 TUSC3 miRanda miRanda
14034 chr8 15621780 15621780 1 + C A rs556086183 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC ATGAAGATAAACTGTTCATGACTTTATACTATTTTGAATTC < 41bp 1 0.358864603358756 1 0.514511585235596 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621780 . . 0 hm6A_associated_SNPs_10375 0 0 1 5 15621758 15621781 mRNA hsa-miR-194 TUSC3 miRanda miRanda
14034 chr8 15621780 15621780 1 + C A rs556086183 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC ATGAAGATAAACTGTTCATGACTTTATACTATTTTGAATTC < 41bp 1 0.358864603358756 1 0.514511585235596 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621780 . . 0 hm6A_associated_SNPs_10375 0 0 1 5 15621771 15621791 mRNA hsa-miR-340 TUSC3 miRanda miRanda
14034 chr8 15621780 15621780 1 + C A rs556086183 15621783 + 15621763 15621803 41 ATGAAGATAAACTGTTCCTGACTTTATACTATTTTGAATTC ATGAAGATAAACTGTTCATGACTTTATACTATTTTGAATTC < 41bp 1 0.358864603358756 1 0.514511585235596 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 TUSC3 ENSG00000104723 UTR3 Human protein_coding chr8:15621783 chr8:15621780 . . 0 hm6A_associated_SNPs_10375 0 0 1 5 15621764 15621783 mRNA hsa-miR-873 TUSC3 miRanda miRanda
14034 chr8 17078563 17078563 1 + G C rs185182953 17078581 + 17078561 17078601 41 TAGATTATTTCTCCTGTTGAACATAGTAAAACTATTGAATT TACATTATTTCTCCTGTTGAACATAGTAAAACTATTGAATT < 41bp 1 0.103546506659351 1 0.420782625675201 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 ZDHHC2 ENSG00000104219 UTR3 Human protein_coding chr8:17078581 chr8:17078563 . . 0 hm6A_associated_SNPs_10376 0 0 1 2 17078553 17078574 mRNA hsa-miR-539 ZDHHC2 miRanda miRanda
14034 chr8 17078563 17078563 1 + G C rs185182953 17078581 + 17078561 17078601 41 TAGATTATTTCTCCTGTTGAACATAGTAAAACTATTGAATT TACATTATTTCTCCTGTTGAACATAGTAAAACTATTGAATT < 41bp 1 0.103546506659351 1 0.420782625675201 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 ZDHHC2 ENSG00000104219 UTR3 Human protein_coding chr8:17078581 chr8:17078563 . . 0 hm6A_associated_SNPs_10376 0 0 1 2 17078557 17078581 mRNA hsa-miR-421 ZDHHC2 miRanda miRanda
14034 chr8 17079094 17079094 1 + C T rs560346690 17079093 + 17079073 17079113 41 CAAAATCTTTGTTAAACCAAACATTCAACACAAAATAAACT CAAAATCTTTGTTAAACCAAATATTCAACACAAAATAAACT Direct Loss 1 0.12342968323816 1 0.823626399040222 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 ZDHHC2 ENSG00000104219 UTR3 Human protein_coding chr8:17079093 chr8:17079094 . . 0 hm6A_associated_SNPs_10377 0 0 1 1 17079083 17079103 mRNA hsa-miR-653 ZDHHC2 miRanda miRanda
14034 chr8 17425934 17425934 1 + G A rs148387828 17425921 + 17425901 17425941 41 CACATTTTCCCCAGAGATAAACATTGAGAGAACGAAAGCCA CACATTTTCCCCAGAGATAAACATTGAGAGAACAAAAGCCA < 41bp 1 0.105201536735553 1 0.0256305932998657 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 SLC7A2 ENSG00000003989 UTR3 Human protein_coding chr8:17425921 chr8:17425934 . . 0 hm6A_associated_SNPs_10391 0 0 1 1 17425929 17425951 mRNA hsa-miR-425 SLC7A2 miRanda miRanda
14034 chr8 18258534 18258534 1 + T C rs2552 18258543 + 18258523 18258563 41 ATGTCAGCATTTATTAAAAAACAATAACTTTTTAAAGAAAC ATGTCAGCATTCATTAAAAAACAATAACTTTTTAAAGAAAC < 41bp 1 0.0204322196846507 1 0.520394206047058 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 12 NAT2 ENSG00000156006 UTR3 Human protein_coding chr8:18258543 chr8:18258534 . . 0 hm6A_associated_SNPs_10411 0 0 0 1 18258513 18258535 mRNA hsa-miR-155 NAT2 miRanda miRanda
14034 chr8 20147775 20147775 1 + A G rs73609957 20147761 + 20147741 20147781 41 CAGGGTCGGGCCTGCTTAGGACTTGGGTGGGAGAATGGAGA CAGGGTCGGGCCTGCTTAGGACTTGGGTGGGAGAGTGGAGA < 41bp 1 0.139018381851942 1 0.985202074050903 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 35 LZTS1-AS1 ENSG00000253733 ncRNA_exonic Human lincRNA chr8:20147761 chr8:20147775 . . 0 hm6A_associated_SNPs_10429 0 0 0 1 20147760 20147781 lncRNA hsa-miR-136-5p LZTS1-AS1 miRanda starBase2
14034 chr8 21827038 21827038 1 + T A rs75264141 21827052 + 21827032 21827072 41 CAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAAC CAAGCTAGTATCACGCACAAACAACCCCCTACCATTGGAAC < 41bp 1 0.782710682902007 1 0.252361357212067 experiment 0.434578634195987 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 7 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827052 chr8:21827038 synonymous SNV . 0 hm6A_associated_SNPs_10430 0 0 1 3 21827032 21827051 mRNA hsa-miR-210 XPO7 miRanda miRanda
14034 chr8 21827038 21827038 1 + T A rs75264141 21827052 + 21827032 21827072 41 CAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAAC CAAGCTAGTATCACGCACAAACAACCCCCTACCATTGGAAC < 41bp 1 0.782710682902007 1 0.252361357212067 experiment 0.434578634195987 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 7 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827052 chr8:21827038 synonymous SNV . 0 hm6A_associated_SNPs_10430 0 0 1 3 21827019 21827043 mRNA hsa-miR-381 XPO7 miRanda miRanda
14034 chr8 21827038 21827038 1 + T A rs75264141 21827052 + 21827032 21827072 41 CAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAAC CAAGCTAGTATCACGCACAAACAACCCCCTACCATTGGAAC < 41bp 1 0.782710682902007 1 0.252361357212067 experiment 0.434578634195987 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 7 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827052 chr8:21827038 synonymous SNV . 0 hm6A_associated_SNPs_10430 0 0 1 3 21827022 21827043 mRNA hsa-miR-300 XPO7 miRanda miRanda
14034 chr8 21863930 21863930 1 + T G rs117086926 21863947 + 21863927 21863967 41 TCTTTCCTCTACCCCCAGAAACAAGCCTGTTAATTTTTTTT TCTGTCCTCTACCCCCAGAAACAAGCCTGTTAATTTTTTTT < 41bp 1 0.536344980593795 1 0.586756408214569 experiment 0.927310038812409 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 4 XPO7 ENSG00000130227 UTR3 Human protein_coding chr8:21863947 chr8:21863930 . . 0 hm6A_associated_SNPs_10432 0 0 1 1 21863911 21863932 mRNA hsa-miR-186 XPO7 miRanda miRanda
14034 chr8 21957359 21957359 1 + C T rs138517422 21957346 + 21957326 21957366 41 GCAGCCTGAAGCCCCCGGGGACAACCCCCACACCCTGTATG GCAGCCTGAAGCCCCCGGGGACAACCCCCACACTCTGTATG < 41bp 1 0.556644824285007 1 0.06626096367836 experiment 0.886710351429985 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 34 FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21957346 chr8:21957359 synonymous SNV . 0 hm6A_associated_SNPs_10435 0 0 0 1 21957357 21957375 mRNA hsa-miR-143 FAM160B2 miRanda miRanda
14034 chr8 21960579 21960579 1 + G C rs189156044 21960580 + 21960560 21960600 41 AAGGAGACTGCGGCATGTTGACCACACCAGACTGGGTTTCA AAGGAGACTGCGGCATGTTCACCACACCAGACTGGGTTTCA Direct Loss 1 0.401208793980159 1 0.902067542076111 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 20 FAM160B2 ENSG00000256586 ncRNA_exonic Human other chr8:21960580 chr8:21960579 . . 0 hm6A_associated_SNPs_10436 0 0 0 1 21960561 21960582 mRNA hsa-miR-505 FAM160B2 miRanda miRanda
14034 chr8 21961782 21961782 1 + A T rs528410003 21961766 + 21961746 21961786 41 CGTGGATGAACTGCGTCTGGACTCTTAGATTCATAAAATAT CGTGGATGAACTGCGTCTGGACTCTTAGATTCATAATATAT < 41bp 1 0.456792233976374 1 0.967356264591217 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 37 FAM160B2 ENSG00000256586 ncRNA_exonic Human other chr8:21961766 chr8:21961782 . . 0 hm6A_associated_SNPs_10438 0 0 1 1 21961780 21961802 mRNA hsa-miR-150 FAM160B2 miRanda miRanda
14034 chr8 22108266 22108266 1 + A C rs146572929 22108253 + 22108233 22108273 41 GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTATTTATTT GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTCTTTATTT < 41bp 1 0.578924255072507 1 0.711021959781647 experiment 0.842151489854986 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 POLR3D ENSG00000168495 UTR3 Human protein_coding chr8:22108253 chr8:22108266 . . 0 hm6A_associated_SNPs_10442 0 0 1 4 22108265 22108290 mRNA hsa-miR-208a POLR3D miRanda miRanda
14034 chr8 22108266 22108266 1 + A C rs146572929 22108253 + 22108233 22108273 41 GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTATTTATTT GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTCTTTATTT < 41bp 1 0.578924255072507 1 0.711021959781647 experiment 0.842151489854986 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 POLR3D ENSG00000168495 UTR3 Human protein_coding chr8:22108253 chr8:22108266 . . 0 hm6A_associated_SNPs_10442 0 0 1 4 22108259 22108280 mRNA hsa-miR-381 POLR3D miRanda miRanda
14034 chr8 22108266 22108266 1 + A C rs146572929 22108253 + 22108233 22108273 41 GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTATTTATTT GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTCTTTATTT < 41bp 1 0.578924255072507 1 0.711021959781647 experiment 0.842151489854986 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 POLR3D ENSG00000168495 UTR3 Human protein_coding chr8:22108253 chr8:22108266 . . 0 hm6A_associated_SNPs_10442 0 0 1 4 22108259 22108280 mRNA hsa-miR-300 POLR3D miRanda miRanda
14034 chr8 22108266 22108266 1 + A C rs146572929 22108253 + 22108233 22108273 41 GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTATTTATTT GCACATCCTTGCTGCTGGGGACTTGGCCCTGCTCTTTATTT < 41bp 1 0.578924255072507 1 0.711021959781647 experiment 0.842151489854986 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 POLR3D ENSG00000168495 UTR3 Human protein_coding chr8:22108253 chr8:22108266 . . 0 hm6A_associated_SNPs_10442 0 0 1 4 22108266 22108290 mRNA hsa-miR-208b POLR3D miRanda miRanda
14034 chr8 22278330 22278330 1 + C T rs116076348 22278314 + 22278294 22278334 41 TCTGAAATGTAAGGGCACAAACTTCACTTAGGGCATCGCAG TCTGAAATGTAAGGGCACAAACTTCACTTAGGGCATTGCAG < 41bp 1 0.638913516643021 1 0.0136380195617676 experiment 0.722172966713958 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 SLC39A14 ENSG00000104635 UTR3 Human protein_coding chr8:22278314 chr8:22278330 . . 0 hm6A_associated_SNPs_10445 0 0 1 1 22278325 22278347 mRNA hsa-miR-544 SLC39A14 miRanda miRanda
14034 chr8 22279055 22279055 1 + G A rs570893096 22279063 + 22279043 22279083 41 TCCTTGAATGTTGGAATCTAACTTTTTATATTGTCATTATT TCCTTGAATGTTAGAATCTAACTTTTTATATTGTCATTATT < 41bp 1 0.283596878417007 1 0.314094066619873 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 SLC39A14 ENSG00000104635 UTR3 Human protein_coding chr8:22279063 chr8:22279055 . . 0 hm6A_associated_SNPs_10448 0 0 1 1 22279034 22279055 mRNA hsa-miR-543 SLC39A14 miRanda miRanda
14034 chr8 22477585 22477585 1 + C A rs1869 22477584 + 22477564 22477604 41 GTCTGATGTCAGTGAACGGAACTGAAGAGCAAGACATGGAG GTCTGATGTCAGTGAACGGAAATGAAGAGCAAGACATGGAG Direct Loss 1 0.727160499325555 1 0.885921895503998 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 CCAR2 ENSG00000158941 UTR3 Human protein_coding chr8:22477584 chr8:22477585 . . 0 hm6A_associated_SNPs_10460 0 0 1 1 22477579 22477599 mRNA hsa-miR-431 KIAA1967 miRanda miRanda
14034 chr8 22477585 22477585 1 + C A rs1869 22477597 + 22477577 22477617 41 GAACGGAACTGAAGAGCAAGACATGGAGCCTGGCTGGGGCT GAACGGAAATGAAGAGCAAGACATGGAGCCTGGCTGGGGCT < 41bp 1 0.685414905995727 1 0.887929081916809 experiment 0.629170188008546 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 CCAR2 ENSG00000158941 UTR3 Human protein_coding chr8:22477597 chr8:22477585 . . 0 hm6A_associated_SNPs_10461 0 0 1 1 22477579 22477599 mRNA hsa-miR-431 KIAA1967 miRanda miRanda
14034 chr8 23118155 23118155 1 + T C rs9828 23118148 + 23118128 23118168 41 GACCCTCATGTAAAAGAGAGACCAGGCTTGCTGGGTGTGTA GACCCTCATGTAAAAGAGAGACCAGGCCTGCTGGGTGTGTA < 41bp 1 0.786121764608603 1 0.96069461107254 experiment 0.427756470782795 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118148 chr8:23118155 . . 0 hm6A_associated_SNPs_10479 0 0 1 2 23118148 23118168 mRNA hsa-miR-362-3p CHMP7 miRanda miRanda
14034 chr8 23118155 23118155 1 + T C rs9828 23118148 + 23118128 23118168 41 GACCCTCATGTAAAAGAGAGACCAGGCTTGCTGGGTGTGTA GACCCTCATGTAAAAGAGAGACCAGGCCTGCTGGGTGTGTA < 41bp 1 0.786121764608603 1 0.96069461107254 experiment 0.427756470782795 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118148 chr8:23118155 . . 0 hm6A_associated_SNPs_10479 0 0 1 2 23118147 23118168 mRNA hsa-miR-329 CHMP7 miRanda miRanda
14034 chr8 23118162 23118162 1 + G A rs2294124 23118148 + 23118128 23118168 41 GACCCTCATGTAAAAGAGAGACCAGGCTTGCTGGGTGTGTA GACCCTCATGTAAAAGAGAGACCAGGCTTGCTGGATGTGTA < 41bp 1 0.794985559350791 1 0.965300858020782 experiment 0.410028881298418 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118148 chr8:23118162 . . 0 hm6A_associated_SNPs_10480 0 0 1 2 23118148 23118168 mRNA hsa-miR-362-3p CHMP7 miRanda miRanda
14034 chr8 23118162 23118162 1 + G A rs2294124 23118148 + 23118128 23118168 41 GACCCTCATGTAAAAGAGAGACCAGGCTTGCTGGGTGTGTA GACCCTCATGTAAAAGAGAGACCAGGCTTGCTGGATGTGTA < 41bp 1 0.794985559350791 1 0.965300858020782 experiment 0.410028881298418 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118148 chr8:23118162 . . 0 hm6A_associated_SNPs_10480 0 0 1 2 23118147 23118168 mRNA hsa-miR-329 CHMP7 miRanda miRanda
14034 chr8 23118945 23118945 1 + C T rs571977192 23118934 + 23118914 23118954 41 CTTGGCCCCATCATGGAGTAACTTAAAAATACATATCTATC CTTGGCCCCATCATGGAGTAACTTAAAAATATATATCTATC < 41bp 1 0.429691883526107 1 0.786527812480927 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118934 chr8:23118945 . . 0 hm6A_associated_SNPs_10482 0 0 1 2 23118929 23118951 mRNA hsa-miR-190 CHMP7 miRanda miRanda
14034 chr8 23118945 23118945 1 + C T rs571977192 23118934 + 23118914 23118954 41 CTTGGCCCCATCATGGAGTAACTTAAAAATACATATCTATC CTTGGCCCCATCATGGAGTAACTTAAAAATATATATCTATC < 41bp 1 0.429691883526107 1 0.786527812480927 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118934 chr8:23118945 . . 0 hm6A_associated_SNPs_10482 0 0 1 2 23118933 23118951 mRNA hsa-miR-190b CHMP7 miRanda miRanda
14034 chr8 23118945 23118945 1 + C T rs571977192 23118962 + 23118942 23118982 41 ATACATATCTATCTTCCAGAACAAGCCACACAACAACACAC ATATATATCTATCTTCCAGAACAAGCCACACAACAACACAC < 41bp 1 0.698147768926668 1 0.815133213996887 experiment 0.603704462146663 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118962 chr8:23118945 . . 0 hm6A_associated_SNPs_10483 0 0 1 2 23118929 23118951 mRNA hsa-miR-190 CHMP7 miRanda miRanda
14034 chr8 23118945 23118945 1 + C T rs571977192 23118962 + 23118942 23118982 41 ATACATATCTATCTTCCAGAACAAGCCACACAACAACACAC ATATATATCTATCTTCCAGAACAAGCCACACAACAACACAC < 41bp 1 0.698147768926668 1 0.815133213996887 experiment 0.603704462146663 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118962 chr8:23118945 . . 0 hm6A_associated_SNPs_10483 0 0 1 2 23118933 23118951 mRNA hsa-miR-190b CHMP7 miRanda miRanda
14034 chr8 24776423 24776423 1 + C T rs12515 24776427 + 24776407 24776447 41 AGCCAAAAACAATAAACGAAACACAGAACTCAGCCTTAAGA AGCCAAAAACAATAAATGAAACACAGAACTCAGCCTTAAGA < 41bp 1 0.211684960708955 1 0.00485983490943909 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 17 NEFM ENSG00000104722 UTR3 Human protein_coding chr8:24776427 chr8:24776423 . . 0 hm6A_associated_SNPs_10497 0 0 0 1 24776420 24776444 mRNA hsa-miR-485-5p NEFM miRanda miRanda
14034 chr8 25364443 25364443 1 + A C rs73550865 25364461 + 25364441 25364481 41 TAAAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG TACAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG < 41bp 1 0.750748178546914 1 0.978920221328735 experiment 0.498503642906172 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364461 chr8:25364443 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_10512 0 0 1 3 25364431 25364456 mRNA hsa-miR-138 CDCA2 miRanda miRanda
14034 chr8 25364443 25364443 1 + A C rs73550865 25364461 + 25364441 25364481 41 TAAAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG TACAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG < 41bp 1 0.750748178546914 1 0.978920221328735 experiment 0.498503642906172 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364461 chr8:25364443 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_10512 0 0 1 3 25364434 25364455 mRNA hsa-miR-125a-3p CDCA2 miRanda miRanda
14034 chr8 25364443 25364443 1 + A C rs73550865 25364461 + 25364441 25364481 41 TAAAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG TACAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG < 41bp 1 0.750748178546914 1 0.978920221328735 experiment 0.498503642906172 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364461 chr8:25364443 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_10512 0 0 1 3 25364428 25364448 mRNA hsa-miR-590-3p CDCA2 miRanda miRanda
14034 chr8 27530475 27530475 1 + C T rs1036710 27530465 + 27530445 27530485 41 GCACACCCCACGGCCATGTAACTCTCCTGTCCACATATGAT GCACACCCCACGGCCATGTAACTCTCCTGTTCACATATGAT < 41bp 1 0.305728108421579 1 0.0293897390365601 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 SCARA3 ENSG00000168077 UTR3 Human protein_coding chr8:27530465 chr8:27530475 . . 0 hm6A_associated_SNPs_10536 0 0 1 1 27530456 27530477 mRNA hsa-miR-184 SCARA3 miRanda miRanda
14034 chr8 30428707 30428707 1 + A G rs144355951 30428691 + 30428671 30428711 41 AGGATCCCAGTTCTAGTAGGACAGCCCTGCAAGACAATCAA AGGATCCCAGTTCTAGTAGGACAGCCCTGCAAGACAGTCAA < 41bp 1 0.290265108698566 1 0.762220740318298 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 37 RBPMS ENSG00000157110 UTR3 Human protein_coding chr8:30428691 chr8:30428707 . . 0 hm6A_associated_SNPs_10555 0 0 0 1 30428690 30428710 mRNA hsa-miR-219-5p RBPMS miRanda miRanda
14034 chr8 33356172 33356172 1 + G C rs372973429 33356188 + 33356168 33356208 41 CCCAGGACTGAACATGCAGAACTGTTTTTTTTTTTTTTTTA CCCACGACTGAACATGCAGAACTGTTTTTTTTTTTTTTTTA < 41bp 1 0.739241214148552 1 0.866182029247284 experiment 0.521517571702896 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 MAK16;TTI2 ENSG00000198042 UTR3 Human protein_coding chr8:33356188 chr8:33356172 . . 0 hm6A_associated_SNPs_10574 0 0 1 2 33356168 33356189 mRNA hsa-miR-544 MAK16 miRanda miRanda
14034 chr8 33356172 33356172 1 + G C rs372973429 33356188 + 33356168 33356208 41 CCCAGGACTGAACATGCAGAACTGTTTTTTTTTTTTTTTTA CCCACGACTGAACATGCAGAACTGTTTTTTTTTTTTTTTTA < 41bp 1 0.739241214148552 1 0.866182029247284 experiment 0.521517571702896 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 MAK16;TTI2 ENSG00000198042 UTR3 Human protein_coding chr8:33356188 chr8:33356172 . . 0 hm6A_associated_SNPs_10574 0 0 1 2 33356170 33356194 mRNA hsa-miR-543 MAK16 miRanda miRanda
14034 chr8 33357400 33357400 1 + A G rs572474094 33357418 + 33357398 33357438 41 TAAATTAAGAATAGGGAAAAACATCTACCTAAAAGATGGTT TAGATTAAGAATAGGGAAAAACATCTACCTAAAAGATGGTT < 41bp 1 0.330325798866805 1 0.0130434930324554 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 3 MAK16 ENSG00000198042 UTR3 Human protein_coding chr8:33357418 chr8:33357400 . . 0 hm6A_associated_SNPs_10576 0 0 1 1 33357398 33357426 mRNA hsa-miR-142-3p MAK16 miRanda miRanda
14034 chr8 37556314 37556314 1 + G A rs117603140 37556329 + 37556309 37556349 41 ACCCAGCCCTTCCCCACCGGACTGTGTATTTATTTACTATA ACCCAACCCTTCCCCACCGGACTGTGTATTTATTTACTATA < 41bp 1 0.723038241086697 1 0.990095198154449 experiment 0.553923517826606 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 ZNF703 ENSG00000183779 UTR3 Human protein_coding chr8:37556329 chr8:37556314 . . 0 hm6A_associated_SNPs_10581 0 0 1 2 37556294 37556316 mRNA hsa-miR-138 ZNF703 miRanda miRanda
14034 chr8 37556314 37556314 1 + G A rs117603140 37556329 + 37556309 37556349 41 ACCCAGCCCTTCCCCACCGGACTGTGTATTTATTTACTATA ACCCAACCCTTCCCCACCGGACTGTGTATTTATTTACTATA < 41bp 1 0.723038241086697 1 0.990095198154449 experiment 0.553923517826606 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 ZNF703 ENSG00000183779 UTR3 Human protein_coding chr8:37556329 chr8:37556314 . . 0 hm6A_associated_SNPs_10581 0 0 1 2 37556305 37556326 mRNA hsa-miR-491-5p ZNF703 miRanda miRanda
14034 chr8 37996769 37996769 1 + T G rs550061933 37996777 + 37996757 37996797 41 TTTTCTCCCCACTTCCAGTGACTGCTCTTATTTTGTGTACC TTTTCTCCCCACGTCCAGTGACTGCTCTTATTTTGTGTACC < 41bp 1 0.750299013319755 1 0.9109867811203 experiment 0.499401973360491 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 13 ASH2L ENSG00000129691 UTR3 Human protein_coding chr8:37996777 chr8:37996769 . . 0 hm6A_associated_SNPs_10591 0 0 1 1 37996748 37996769 mRNA hsa-miR-491-5p ASH2L miRanda miRanda
14034 chr8 40011430 40011430 1 + T A rs191536462 40011420 + 40011400 40011440 41 CCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATT CCAAGAATGGACATTCAAAGACCAAGTGAGATTGTGAGATT < 41bp 1 0.502157164318236 1 0.999830067157745 experiment 0.995685671363529 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011420 chr8:40011430 . . 0 hm6A_associated_SNPs_10608 0 0 1 1 40011420 40011441 mRNA hsa-miR-216a C8orf4 miRanda miRanda
14034 chr8 40011430 40011430 1 + T A rs191536462 40011444 + 40011424 40011464 41 AGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTGCTGC AGTGAGATTGTGAGATTCTAACAGATGCAGCATTTTGCTGC < 41bp 1 0.332221895655562 1 0.998186469078064 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011444 chr8:40011430 . . 0 hm6A_associated_SNPs_10609 0 0 1 1 40011420 40011441 mRNA hsa-miR-216a C8orf4 miRanda miRanda
14034 chr8 40011632 40011632 1 + C T rs73674781 40011625 + 40011605 40011645 41 CTTTCAGCAAGGATTTGAAAACTCTTCCGTCCCTGCAGGAA CTTTCAGCAAGGATTTGAAAACTCTTCTGTCCCTGCAGGAA < 41bp 1 0.375995971095331 1 0.989737868309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011625 chr8:40011632 . . 0 hm6A_associated_SNPs_10610 0 0 1 1 40011616 40011637 mRNA hsa-miR-184 C8orf4 miRanda miRanda
14034 chr8 40011703 40011703 1 + T C rs115592049 40011688 + 40011668 40011708 41 CCTGGACAGATGTAATGAGAACTAAAGAAAACAGATGGCTG CCTGGACAGATGTAATGAGAACTAAAGAAAACAGACGGCTG < 41bp 1 0.463215470840913 1 0.997772932052612 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011688 chr8:40011703 . . 0 hm6A_associated_SNPs_10611 0 0 0 1 40011688 40011710 mRNA hsa-miR-338-3p C8orf4 miRanda miRanda
14034 chr8 40011703 40011703 1 + T C rs115592049 40011698 + 40011678 40011718 41 TGTAATGAGAACTAAAGAAAACAGATGGCTGGAGATGACAT TGTAATGAGAACTAAAGAAAACAGACGGCTGGAGATGACAT < 41bp 1 0.302714332967261 1 0.996380627155304 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011698 chr8:40011703 . . 0 hm6A_associated_SNPs_10612 0 0 0 1 40011688 40011710 mRNA hsa-miR-338-3p C8orf4 miRanda miRanda
14034 chr8 40011703 40011703 1 + T C rs115592049 40011715 + 40011695 40011735 41 AAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTT AAAACAGACGGCTGGAGATGACATTTATCCAGGGTCACTTT < 41bp 1 0.362470436846989 1 0.992518901824951 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011715 chr8:40011703 . . 0 hm6A_associated_SNPs_10613 0 0 0 1 40011688 40011710 mRNA hsa-miR-338-3p C8orf4 miRanda miRanda
14034 chr8 40011708 40011708 1 + G A rs146317687 40011688 + 40011668 40011708 41 CCTGGACAGATGTAATGAGAACTAAAGAAAACAGATGGCTG CCTGGACAGATGTAATGAGAACTAAAGAAAACAGATGGCTA < 41bp 1 0.455283585216184 1 0.994393706321716 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011688 chr8:40011708 . . 0 hm6A_associated_SNPs_10614 0 0 0 2 40011688 40011710 mRNA hsa-miR-338-3p C8orf4 miRanda miRanda
14034 chr8 40011708 40011708 1 + G A rs146317687 40011688 + 40011668 40011708 41 CCTGGACAGATGTAATGAGAACTAAAGAAAACAGATGGCTG CCTGGACAGATGTAATGAGAACTAAAGAAAACAGATGGCTA < 41bp 1 0.455283585216184 1 0.994393706321716 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011688 chr8:40011708 . . 0 hm6A_associated_SNPs_10614 0 0 0 2 40011705 40011731 mRNA hsa-miR-504 C8orf4 miRanda miRanda
14034 chr8 40011708 40011708 1 + G A rs146317687 40011698 + 40011678 40011718 41 TGTAATGAGAACTAAAGAAAACAGATGGCTGGAGATGACAT TGTAATGAGAACTAAAGAAAACAGATGGCTAGAGATGACAT < 41bp 1 0.321324280654064 1 0.990423917770386 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011698 chr8:40011708 . . 0 hm6A_associated_SNPs_10615 0 0 0 2 40011688 40011710 mRNA hsa-miR-338-3p C8orf4 miRanda miRanda
14034 chr8 40011708 40011708 1 + G A rs146317687 40011698 + 40011678 40011718 41 TGTAATGAGAACTAAAGAAAACAGATGGCTGGAGATGACAT TGTAATGAGAACTAAAGAAAACAGATGGCTAGAGATGACAT < 41bp 1 0.321324280654064 1 0.990423917770386 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011698 chr8:40011708 . . 0 hm6A_associated_SNPs_10615 0 0 0 2 40011705 40011731 mRNA hsa-miR-504 C8orf4 miRanda miRanda
14034 chr8 40011708 40011708 1 + G A rs146317687 40011715 + 40011695 40011735 41 AAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTT AAAACAGATGGCTAGAGATGACATTTATCCAGGGTCACTTT < 41bp 1 0.358892063230777 1 0.982123672962189 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011715 chr8:40011708 . . 0 hm6A_associated_SNPs_10616 0 0 0 2 40011688 40011710 mRNA hsa-miR-338-3p C8orf4 miRanda miRanda
14034 chr8 40011708 40011708 1 + G A rs146317687 40011715 + 40011695 40011735 41 AAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTT AAAACAGATGGCTAGAGATGACATTTATCCAGGGTCACTTT < 41bp 1 0.358892063230777 1 0.982123672962189 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011715 chr8:40011708 . . 0 hm6A_associated_SNPs_10616 0 0 0 2 40011705 40011731 mRNA hsa-miR-504 C8orf4 miRanda miRanda
14034 chr8 40011721 40011721 1 + A T rs183422301 40011715 + 40011695 40011735 41 AAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTT AAAACAGATGGCTGGAGATGACATTTTTCCAGGGTCACTTT < 41bp 1 0.36635603720733 1 0.988933920860291 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40011715 chr8:40011721 . . 0 hm6A_associated_SNPs_10617 0 0 0 1 40011705 40011731 mRNA hsa-miR-504 C8orf4 miRanda miRanda
14034 chr8 42012186 42012186 1 + T C rs35071361 42012194 + 42012174 42012214 41 AAGGCTTTCTTCTGTCACTGACAATCGCCACCATGATCCAT AAGGCTTTCTTCCGTCACTGACAATCGCCACCATGATCCAT < 41bp 1 0.686192620568393 1 0.924371838569641 experiment 0.627614758863213 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 AP3M2 ENSG00000070718 UTR5 Human protein_coding chr8:42012194 chr8:42012186 . . 0 hm6A_associated_SNPs_10630 0 0 1 3 42012172 42012194 mRNA hsa-miR-148a AP3M2 miRanda miRanda
14034 chr8 42012186 42012186 1 + T C rs35071361 42012194 + 42012174 42012214 41 AAGGCTTTCTTCTGTCACTGACAATCGCCACCATGATCCAT AAGGCTTTCTTCCGTCACTGACAATCGCCACCATGATCCAT < 41bp 1 0.686192620568393 1 0.924371838569641 experiment 0.627614758863213 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 AP3M2 ENSG00000070718 UTR5 Human protein_coding chr8:42012194 chr8:42012186 . . 0 hm6A_associated_SNPs_10630 0 0 1 3 42012173 42012194 mRNA hsa-miR-152 AP3M2 miRanda miRanda
14034 chr8 42012186 42012186 1 + T C rs35071361 42012194 + 42012174 42012214 41 AAGGCTTTCTTCTGTCACTGACAATCGCCACCATGATCCAT AAGGCTTTCTTCCGTCACTGACAATCGCCACCATGATCCAT < 41bp 1 0.686192620568393 1 0.924371838569641 experiment 0.627614758863213 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 AP3M2 ENSG00000070718 UTR5 Human protein_coding chr8:42012194 chr8:42012186 . . 0 hm6A_associated_SNPs_10630 0 0 1 3 42012172 42012194 mRNA hsa-miR-148b AP3M2 miRanda miRanda
14034 chr8 42027264 42027264 1 + A C rs10504050 42027268 + 42027248 42027288 41 AATCAGATTTTCCCTCAAAGACCATGATGGTATCGGACTAG AATCAGATTTTCCCTCCAAGACCATGATGGTATCGGACTAG < 41bp 1 0.36461913730796 1 0.956663370132446 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 17 AP3M2 ENSG00000070718 UTR3 Human protein_coding chr8:42027268 chr8:42027264 . . 0 hm6A_associated_SNPs_10635 0 0 1 1 42027258 42027281 mRNA hsa-miR-875-5p AP3M2 miRanda miRanda
14034 chr8 42407799 42407799 1 + C G rs138368316 42407817 + 42407797 42407837 41 TTCTTTCTACTAAATCATGAACAGCTTTAAAAACATTTCTG TTGTTTCTACTAAATCATGAACAGCTTTAAAAACATTTCTG < 41bp 1 0.717113824334519 1 0.825342535972595 experiment 0.565772351330963 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 SMIM19 ENSG00000176209 UTR3 Human protein_coding chr8:42407817 chr8:42407799 . . 0 hm6A_associated_SNPs_10641 0 0 1 2 42407782 42407803 mRNA hsa-miR-186 C8orf40 miRanda miRanda
14034 chr8 42407799 42407799 1 + C G rs138368316 42407817 + 42407797 42407837 41 TTCTTTCTACTAAATCATGAACAGCTTTAAAAACATTTCTG TTGTTTCTACTAAATCATGAACAGCTTTAAAAACATTTCTG < 41bp 1 0.717113824334519 1 0.825342535972595 experiment 0.565772351330963 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 SMIM19 ENSG00000176209 UTR3 Human protein_coding chr8:42407817 chr8:42407799 . . 0 hm6A_associated_SNPs_10641 0 0 1 2 42407796 42407817 mRNA hsa-miR-433 C8orf40 miRanda miRanda
14034 chr8 42940408 42940408 1 + A G rs191418964 42940425 + 42940405 42940445 41 CCAACAAATGTACAGCAATAACACCATCCAGAAGAACTTGA CCAGCAAATGTACAGCAATAACACCATCCAGAAGAACTTGA < 41bp 1 0.73651026222558 1 0.927451312541962 experiment 0.52697947554884 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 4 FNTA ENSG00000168522 CDS Human protein_coding chr8:42940425 chr8:42940408 nonsynonymous SNV 0.039 0 hm6A_associated_SNPs_10651 0 0 0 1 42940403 42940425 mRNA hsa-miR-137 FNTA miRanda miRanda
14034 chr8 42940540 42940540 1 + G A rs142364879 42940559 + 42940539 42940579 41 GGTATTGCTTTTTAACAAGAACTGATGCTCCTTGGGTGCTG GATATTGCTTTTTAACAAGAACTGATGCTCCTTGGGTGCTG < 41bp 1 0.696189223390739 1 0.965215086936951 experiment 0.607621553218523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 2 FNTA ENSG00000168522 UTR3 Human protein_coding chr8:42940559 chr8:42940540 . . 0 hm6A_associated_SNPs_10652 0 0 1 1 42940523 42940545 mRNA hsa-miR-429 FNTA miRanda miRanda
14034 chr8 42940649 42940649 1 + A G rs146781943 42940666 + 42940646 42940686 41 AGAAAAAGTCCCATAAAGGAACTTTTGTAGTCTTATCAACA AGAGAAAGTCCCATAAAGGAACTTTTGTAGTCTTATCAACA < 41bp 1 0.715738094523829 1 0.887886524200439 experiment 0.568523810952343 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 4 FNTA ENSG00000168522 UTR3 Human protein_coding chr8:42940666 chr8:42940649 . . 0 hm6A_associated_SNPs_10653 0 0 1 1 42940636 42940660 mRNA hsa-miR-135a FNTA miRanda miRanda
14034 chr8 48309054 48309054 1 + A G rs199888365 48309061 + 48309041 48309081 41 CAGTTTGCATCGGATGCAAGACAGATTATGGAGAGACTGAT CAGTTTGCATCGGGTGCAAGACAGATTATGGAGAGACTGAT < 41bp 1 0.342816537581258 1 0.991386592388153 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48309061 chr8:48309054 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_10658 0 0 1 1 48309046 48309063 mRNA hsa-miR-431 KIAA0146 miRanda miRanda
14034 chr8 48889875 48889875 1 + T C rs568975576 48889861 + 48889841 48889881 41 AAAAACCTGCCAATTTTCAAACATACCGTAGAGATTATTTT AAAAACCTGCCAATTTTCAAACATACCGTAGAGACTATTTT < 41bp 1 0.269372278535638 1 0.0379415154457092 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 35 MCM4 ENSG00000104738 UTR3 Human protein_coding chr8:48889861 chr8:48889875 . . 0 hm6A_associated_SNPs_10661 1 0 1 2 48889872 48889892 mRNA hsa-miR-183 MCM4 miRanda miRanda
14034 chr8 48889875 48889875 1 + T C rs568975576 48889861 + 48889841 48889881 41 AAAAACCTGCCAATTTTCAAACATACCGTAGAGATTATTTT AAAAACCTGCCAATTTTCAAACATACCGTAGAGACTATTTT < 41bp 1 0.269372278535638 1 0.0379415154457092 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 35 MCM4 ENSG00000104738 UTR3 Human protein_coding chr8:48889861 chr8:48889875 . . 0 hm6A_associated_SNPs_10661 1 0 1 2 48889859 48889877 mRNA hsa-miR-216b MCM4 miRanda miRanda
14034 chr8 56923042 56923042 1 + A G rs45489500 56923023 + 56923003 56923043 41 TAGGACTCAAAGTTTCAGAGACCATTGCAATGAATCCCCAA TAGGACTCAAAGTTTCAGAGACCATTGCAATGAATCCCCGA < 41bp 1 0.311631426794029 1 0.980331063270569 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 LYN ENSG00000254087 UTR3 Human protein_coding chr8:56923023 chr8:56923042 . . 0 hm6A_associated_SNPs_10672 0 0 1 1 56923034 56923055 mRNA hsa-miR-544 LYN miRanda miRanda
14034 chr8 56923042 56923042 1 + A G rs45489500 56923054 + 56923034 56923074 41 GAATCCCCAATAATTGCAGAACTAAACTCATTTATAAAGCT GAATCCCCGATAATTGCAGAACTAAACTCATTTATAAAGCT < 41bp 1 0.419575408929856 1 0.968990325927734 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 LYN ENSG00000254087 UTR3 Human protein_coding chr8:56923054 chr8:56923042 . . 0 hm6A_associated_SNPs_10673 0 0 1 1 56923034 56923055 mRNA hsa-miR-544 LYN miRanda miRanda
14034 chr8 56923042 56923042 1 + A G rs45489500 56923059 + 56923039 56923079 41 CCCAATAATTGCAGAACTAAACTCATTTATAAAGCTAAAAT CCCGATAATTGCAGAACTAAACTCATTTATAAAGCTAAAAT < 41bp 1 0.313517800704062 1 0.953771233558655 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LYN ENSG00000254087 UTR3 Human protein_coding chr8:56923059 chr8:56923042 . . 0 hm6A_associated_SNPs_10674 0 0 1 1 56923034 56923055 mRNA hsa-miR-544 LYN miRanda miRanda
14034 chr8 56923047 56923047 1 + T C rs557419778 56923054 + 56923034 56923074 41 GAATCCCCAATAATTGCAGAACTAAACTCATTTATAAAGCT GAATCCCCAATAACTGCAGAACTAAACTCATTTATAAAGCT < 41bp 1 0.444517611425326 1 0.966348588466644 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 LYN ENSG00000254087 UTR3 Human protein_coding chr8:56923054 chr8:56923047 . . 0 hm6A_associated_SNPs_10675 0 0 1 1 56923034 56923055 mRNA hsa-miR-544 LYN miRanda miRanda
14034 chr8 56923047 56923047 1 + T C rs557419778 56923059 + 56923039 56923079 41 CCCAATAATTGCAGAACTAAACTCATTTATAAAGCTAAAAT CCCAATAACTGCAGAACTAAACTCATTTATAAAGCTAAAAT < 41bp 1 0.324253639775671 1 0.952149748802185 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 LYN ENSG00000254087 UTR3 Human protein_coding chr8:56923059 chr8:56923047 . . 0 hm6A_associated_SNPs_10676 0 0 1 1 56923034 56923055 mRNA hsa-miR-544 LYN miRanda miRanda
14034 chr8 57131082 57131082 1 + T C rs14859 57131078 + 57131058 57131098 41 TTAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAA TTAATGGCTGCCGACAATGAACTGCCTGTCTGAGTCTAAAA < 41bp 1 0.339063789597138 1 0.911273717880249 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control 25 CHCHD7 ENSG00000170791 UTR3 Human protein_coding chr8:57131078 chr8:57131082 . . 0 hm6A_associated_SNPs_10678 0 0 1 4 57131060 57131083 mRNA hsa-miR-181b CHCHD7 miRanda miRanda
14034 chr8 57131082 57131082 1 + T C rs14859 57131078 + 57131058 57131098 41 TTAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAA TTAATGGCTGCCGACAATGAACTGCCTGTCTGAGTCTAAAA < 41bp 1 0.339063789597138 1 0.911273717880249 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control 25 CHCHD7 ENSG00000170791 UTR3 Human protein_coding chr8:57131078 chr8:57131082 . . 0 hm6A_associated_SNPs_10678 0 0 1 4 57131063 57131083 mRNA hsa-miR-181c CHCHD7 miRanda miRanda
14034 chr8 57131082 57131082 1 + T C rs14859 57131078 + 57131058 57131098 41 TTAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAA TTAATGGCTGCCGACAATGAACTGCCTGTCTGAGTCTAAAA < 41bp 1 0.339063789597138 1 0.911273717880249 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control 25 CHCHD7 ENSG00000170791 UTR3 Human protein_coding chr8:57131078 chr8:57131082 . . 0 hm6A_associated_SNPs_10678 0 0 1 4 57131060 57131083 mRNA hsa-miR-181d CHCHD7 miRanda miRanda
14034 chr8 57131082 57131082 1 + T C rs14859 57131078 + 57131058 57131098 41 TTAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAA TTAATGGCTGCCGACAATGAACTGCCTGTCTGAGTCTAAAA < 41bp 1 0.339063789597138 1 0.911273717880249 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control 25 CHCHD7 ENSG00000170791 UTR3 Human protein_coding chr8:57131078 chr8:57131082 . . 0 hm6A_associated_SNPs_10678 0 0 1 4 57131065 57131091 mRNA hsa-miR-421 CHCHD7 miRanda miRanda
14034 chr8 59360181 59360181 1 + C T rs537559639 59360169 + 59360149 59360189 41 GATGTGCCGTATTAATAAGGACAATACTTCAGCATTAAAAA GATGTGCCGTATTAATAAGGACAATACTTCAGTATTAAAAA < 41bp 1 0.521256989315097 1 0.980713963508606 experiment 0.957486021369806 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 33 UBXN2B ENSG00000215114 UTR3 Human protein_coding chr8:59360169 chr8:59360181 . . 0 hm6A_associated_SNPs_10679 0 0 1 1 59360165 59360186 mRNA hsa-miR-155 UBXN2B miRanda miRanda
14034 chr8 61779250 61779250 1 + T G rs567927898 61779244 + 61779224 61779264 41 TACCTTTTTTAAATTAAAGGACTTTGTTACTTTAGCCACAA TACCTTTTTTAAATTAAAGGACTTTGGTACTTTAGCCACAA < 41bp 1 0.56248648503532 1 0.808242559432983 experiment 0.875027029929361 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 CHD7 ENSG00000171316 UTR3 Human protein_coding chr8:61779244 chr8:61779250 . . 0 hm6A_associated_SNPs_10696 0 0 1 2 61779235 61779254 mRNA hsa-miR-194 CHD7 miRanda miRanda
14034 chr8 61779250 61779250 1 + T G rs567927898 61779244 + 61779224 61779264 41 TACCTTTTTTAAATTAAAGGACTTTGTTACTTTAGCCACAA TACCTTTTTTAAATTAAAGGACTTTGGTACTTTAGCCACAA < 41bp 1 0.56248648503532 1 0.808242559432983 experiment 0.875027029929361 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 CHD7 ENSG00000171316 UTR3 Human protein_coding chr8:61779244 chr8:61779250 . . 0 hm6A_associated_SNPs_10696 0 0 1 2 61779231 61779252 mRNA hsa-miR-495 CHD7 miRanda miRanda
14034 chr8 64123080 64123080 1 + C T rs184146245 64123067 + 64123047 64123087 41 GTCTAATCAGACTTTTTATGACCTTTATAACTACATTTAAA GTCTAATCAGACTTTTTATGACCTTTATAACTATATTTAAA < 41bp 1 0.253513243282373 1 0.0482534170150757 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 YTHDF3 ENSG00000185728 UTR3 Human protein_coding chr8:64123067 chr8:64123080 . . 0 hm6A_associated_SNPs_10700 0 0 1 1 64123072 64123093 mRNA hsa-miR-296-3p YTHDF3 miRanda miRanda
14034 chr8 66622674 66622674 1 + C T rs78999745 66622654 + 66622634 66622674 41 ATGGTTTAAAATTCTCTTTAACAAAATTCAGAAAATTCACC ATGGTTTAAAATTCTCTTTAACAAAATTCAGAAAATTCACT < 41bp 1 0.420852057621125 1 0.0576538741588593 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 MTFR1 ENSG00000066855 UTR3 Human protein_coding chr8:66622654 chr8:66622674 . . 0 hm6A_associated_SNPs_10703 0 0 1 1 66622656 66622677 mRNA hsa-miR-125a-3p MTFR1 miRanda miRanda
14034 chr8 67342821 67342821 1 + A G rs575646884 67342805 + 67342785 67342825 41 GAGTTGGCCATATTTCAGAGACTTAGATTGACGTATATGTT GAGTTGGCCATATTTCAGAGACTTAGATTGACGTATGTGTT < 41bp 1 0.215146049162182 1 0.701050519943237 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 RRS1 ENSG00000179041 UTR3 Human protein_coding chr8:67342805 chr8:67342821 . . 0 hm6A_associated_SNPs_10714 0 0 1 1 67342807 67342828 mRNA hsa-miR-494 RRS1 miRanda miRanda
14034 chr8 67428368 67428368 1 + A C rs17322752 67428356 + 67428336 67428376 41 TGTTGGCCAAGGTTCCCCGGACAAGAGGAAAAACCTTCAGG TGTTGGCCAAGGTTCCCCGGACAAGAGGAAAACCCTTCAGG < 41bp 1 0.181939297032185 1 0.997036755084991 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 33 C8orf46 ENSG00000169085 UTR3 Human protein_coding chr8:67428356 chr8:67428368 . . 0 hm6A_associated_SNPs_10716 0 0 0 1 67428368 67428391 mRNA hsa-miR-24 C8orf46 miRanda miRanda
14034 chr8 67771877 67771877 1 + A G rs138198290 67771865 + 67771845 67771885 41 AAAATAAGTCTATAGATGGGACTGAAACTTCTATTTGTGTG AAAATAAGTCTATAGATGGGACTGAAACTTCTGTTTGTGTG < 41bp 1 0.399682317016787 1 0.947950124740601 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 C8orf44-SGK3;SGK3 ENSG00000104205;ENSG00000270024 UTR3 Human other chr8:67771865 chr8:67771877 . . 0 hm6A_associated_SNPs_10720 0 0 1 1 67771866 67771887 mRNA hsa-miR-377 SGK3 miRanda miRanda
14034 chr8 73850390 73850390 1 + C A rs546890820 73850409 + 73850389 73850429 41 GCGGTTAATAATGCCTGTGAACTAAAAAAATGGGAAGCCCT GAGGTTAATAATGCCTGTGAACTAAAAAAATGGGAAGCCCT < 41bp 1 0.0741102363826775 1 0.149076193571091 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 KCNB2 ENSG00000182674 UTR3 Human protein_coding chr8:73850409 chr8:73850390 . . 0 hm6A_associated_SNPs_10724 0 0 0 2 73850389 73850409 mRNA hsa-miR-27a KCNB2 miRanda miRanda
14034 chr8 73850390 73850390 1 + C A rs546890820 73850409 + 73850389 73850429 41 GCGGTTAATAATGCCTGTGAACTAAAAAAATGGGAAGCCCT GAGGTTAATAATGCCTGTGAACTAAAAAAATGGGAAGCCCT < 41bp 1 0.0741102363826775 1 0.149076193571091 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 KCNB2 ENSG00000182674 UTR3 Human protein_coding chr8:73850409 chr8:73850390 . . 0 hm6A_associated_SNPs_10724 0 0 0 2 73850389 73850409 mRNA hsa-miR-27b KCNB2 miRanda miRanda
14034 chr8 73958463 73958463 1 + T C rs61632286 73958461 + 73958441 73958481 41 TGTCATTGATGTAATTTAAAACTTTTGTTTAAAGCATTACA TGTCATTGATGTAATTTAAAACCTTTGTTTAAAGCATTACA < 41bp 1 0.208920462721663 1 0.422624528408051 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 TERF1 ENSG00000147601 UTR3 Human protein_coding chr8:73958461 chr8:73958463 . . 0 hm6A_associated_SNPs_10725 0 0 1 1 73958458 73958480 mRNA hsa-miR-155 TERF1 miRanda miRanda
14034 chr8 75944814 75944814 1 + A G rs551211129 75944816 + 75944796 75944836 41 CACTAATAAAATGAATCTAAACATTGAATGTGAATGGCCCT CACTAATAAAATGAATCTGAACATTGAATGTGAATGGCCCT < 41bp 1 0.360523915716891 1 0.422025859355927 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CRISPLD1 ENSG00000121005 UTR3 Human protein_coding chr8:75944816 chr8:75944814 . . 0 hm6A_associated_SNPs_10731 0 0 1 6 75944811 75944829 mRNA hsa-miR-23a CRISPLD1 miRanda miRanda
14034 chr8 75944814 75944814 1 + A G rs551211129 75944816 + 75944796 75944836 41 CACTAATAAAATGAATCTAAACATTGAATGTGAATGGCCCT CACTAATAAAATGAATCTGAACATTGAATGTGAATGGCCCT < 41bp 1 0.360523915716891 1 0.422025859355927 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CRISPLD1 ENSG00000121005 UTR3 Human protein_coding chr8:75944816 chr8:75944814 . . 0 hm6A_associated_SNPs_10731 0 0 1 6 75944806 75944827 mRNA hsa-miR-181a CRISPLD1 miRanda miRanda
14034 chr8 75944814 75944814 1 + A G rs551211129 75944816 + 75944796 75944836 41 CACTAATAAAATGAATCTAAACATTGAATGTGAATGGCCCT CACTAATAAAATGAATCTGAACATTGAATGTGAATGGCCCT < 41bp 1 0.360523915716891 1 0.422025859355927 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CRISPLD1 ENSG00000121005 UTR3 Human protein_coding chr8:75944816 chr8:75944814 . . 0 hm6A_associated_SNPs_10731 0 0 1 6 75944806 75944827 mRNA hsa-miR-181b CRISPLD1 miRanda miRanda
14034 chr8 75944814 75944814 1 + A G rs551211129 75944816 + 75944796 75944836 41 CACTAATAAAATGAATCTAAACATTGAATGTGAATGGCCCT CACTAATAAAATGAATCTGAACATTGAATGTGAATGGCCCT < 41bp 1 0.360523915716891 1 0.422025859355927 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CRISPLD1 ENSG00000121005 UTR3 Human protein_coding chr8:75944816 chr8:75944814 . . 0 hm6A_associated_SNPs_10731 0 0 1 6 75944806 75944827 mRNA hsa-miR-181c CRISPLD1 miRanda miRanda
14034 chr8 75944814 75944814 1 + A G rs551211129 75944816 + 75944796 75944836 41 CACTAATAAAATGAATCTAAACATTGAATGTGAATGGCCCT CACTAATAAAATGAATCTGAACATTGAATGTGAATGGCCCT < 41bp 1 0.360523915716891 1 0.422025859355927 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CRISPLD1 ENSG00000121005 UTR3 Human protein_coding chr8:75944816 chr8:75944814 . . 0 hm6A_associated_SNPs_10731 0 0 1 6 75944811 75944829 mRNA hsa-miR-23b CRISPLD1 miRanda miRanda
14034 chr8 75944814 75944814 1 + A G rs551211129 75944816 + 75944796 75944836 41 CACTAATAAAATGAATCTAAACATTGAATGTGAATGGCCCT CACTAATAAAATGAATCTGAACATTGAATGTGAATGGCCCT < 41bp 1 0.360523915716891 1 0.422025859355927 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CRISPLD1 ENSG00000121005 UTR3 Human protein_coding chr8:75944816 chr8:75944814 . . 0 hm6A_associated_SNPs_10731 0 0 1 6 75944806 75944827 mRNA hsa-miR-181d CRISPLD1 miRanda miRanda
14034 chr8 77778973 77778973 1 + A G rs570951954 77778963 + 77778943 77778983 41 CGCTTTTCACAAAACAAAGGACTGTTTTACAAATGATTATT CGCTTTTCACAAAACAAAGGACTGTTTTACGAATGATTATT < 41bp 1 0.0612371945021372 1 0.999463200569153 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 ZFHX4 ENSG00000091656 UTR3 Human protein_coding chr8:77778963 chr8:77778973 . . 0 hm6A_associated_SNPs_10739 0 0 1 1 77778950 77778973 mRNA hsa-miR-30e ZFHX4 miRanda miRanda
14034 chr8 79630133 79630133 1 + T A rs140899604 79630124 + 79630104 79630144 41 TGAGCAAAAAATTTGGATAAACATTTGTATTATTGGTGCCT TGAGCAAAAAATTTGGATAAACATTTGTAATATTGGTGCCT < 41bp 1 0.103844464665517 1 0.422217220067978 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 ZC2HC1A ENSG00000104427 UTR3 Human protein_coding chr8:79630124 chr8:79630133 . . 0 hm6A_associated_SNPs_10742 0 0 0 1 79630125 79630147 mRNA hsa-miR-183 FAM164A miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802714 90802735 mRNA hsa-miR-200b RIPK2 miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802722 90802743 mRNA hsa-miR-320a RIPK2 miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802712 90802735 mRNA hsa-miR-200c RIPK2 miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802714 90802735 mRNA hsa-miR-429 RIPK2 miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802722 90802743 mRNA hsa-miR-320b RIPK2 miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802724 90802743 mRNA hsa-miR-320c RIPK2 miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802705 90802726 mRNA hsa-miR-876-5p RIPK2 miRanda miRanda
14034 chr8 90802725 90802725 1 + C T rs201403469 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCTG < 41bp 1 0.567358690690638 1 0.758628964424133 experiment 0.865282618618725 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802725 . . 0 hm6A_associated_SNPs_10760 0 0 1 8 90802725 90802743 mRNA hsa-miR-320d RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802714 90802735 mRNA hsa-miR-200b RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802722 90802743 mRNA hsa-miR-320a RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802712 90802735 mRNA hsa-miR-200c RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802714 90802735 mRNA hsa-miR-429 RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802722 90802743 mRNA hsa-miR-320b RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802724 90802743 mRNA hsa-miR-320c RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802705 90802726 mRNA hsa-miR-876-5p RIPK2 miRanda miRanda
14034 chr8 90802726 90802726 1 + G A rs148928069 90802706 + 90802686 90802726 41 TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCG TTTATATCTCTGTTGCTTTGACTTTTTTTATATAAAATCCA < 41bp 1 0.556221593690412 1 0.716252684593201 experiment 0.887556812619176 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 RIPK2 ENSG00000104312 UTR3 Human protein_coding chr8:90802706 chr8:90802726 . . 0 hm6A_associated_SNPs_10761 0 0 1 8 90802725 90802743 mRNA hsa-miR-320d RIPK2 miRanda miRanda
14034 chr8 90938629 90938629 1 + T C rs7000851 90938640 + 90938620 90938660 41 AACTACTTATCCCTGTGTGAACATTGAATTACTTTCTGTCA AACTACTTACCCCTGTGTGAACATTGAATTACTTTCTGTCA < 41bp 1 0.452579462502738 1 0.685096919536591 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 OSGIN2 ENSG00000164823 UTR3 Human protein_coding chr8:90938640 chr8:90938629 . . 0 hm6A_associated_SNPs_10762 0 0 1 1 90938619 90938640 mRNA hsa-miR-377 OSGIN2 miRanda miRanda
14034 chr8 90938634 90938634 1 + G C rs151092713 90938640 + 90938620 90938660 41 AACTACTTATCCCTGTGTGAACATTGAATTACTTTCTGTCA AACTACTTATCCCTCTGTGAACATTGAATTACTTTCTGTCA < 41bp 1 0.485556932452255 1 0.6739741563797 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 OSGIN2 ENSG00000164823 UTR3 Human protein_coding chr8:90938640 chr8:90938634 . . 0 hm6A_associated_SNPs_10763 0 0 1 1 90938619 90938640 mRNA hsa-miR-377 OSGIN2 miRanda miRanda
14034 chr8 94740573 94740573 1 + C G rs55726543 94740572 + 94740552 94740592 41 ATGACTTGAAATCCACAATGACTAAATTGTAGAACTTTATA ATGACTTGAAATCCACAATGAGTAAATTGTAGAACTTTATA Direct Loss 1 0.226902458959866 1 0.878703117370605 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 FAM92A ENSG00000188343 UTR3 Human protein_coding chr8:94740572 chr8:94740573 . . 0 hm6A_associated_SNPs_10772 0 0 1 1 94740572 94740593 mRNA hsa-miR-340 FAM92A1 miRanda miRanda
14034 chr8 94935966 94935966 1 + A G rs144036151 94935981 + 94935961 94936001 41 AAAAGATACTACTATAATAAACATTTCCAGTTGGTCATTCT AAAAGGTACTACTATAATAAACATTTCCAGTTGGTCATTCT < 41bp 1 0.472960276649251 1 0.0749457180500031 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 PDP1 ENSG00000164951 UTR3 Human protein_coding chr8:94935981 chr8:94935966 . . 0 hm6A_associated_SNPs_10777 0 0 1 1 94935966 94935986 mRNA hsa-miR-590-3p PDP1 miRanda miRanda
14034 chr8 94935972 94935972 1 + C T rs148691545 94935981 + 94935961 94936001 41 AAAAGATACTACTATAATAAACATTTCCAGTTGGTCATTCT AAAAGATACTATTATAATAAACATTTCCAGTTGGTCATTCT < 41bp 1 0.470647975947235 1 0.0492478907108307 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 PDP1 ENSG00000164951 UTR3 Human protein_coding chr8:94935981 chr8:94935972 . . 0 hm6A_associated_SNPs_10778 0 0 1 1 94935966 94935986 mRNA hsa-miR-590-3p PDP1 miRanda miRanda
14034 chr8 94936269 94936269 1 + C G rs551728387 94936268 + 94936248 94936288 41 CTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTC CTCTTGGTTAAAGTGAAGAAAGAGTACTGTTCACACCTTTC Direct Loss 1 0.181396692728474 1 0.0252458155155182 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 PDP1 ENSG00000164951 UTR3 Human protein_coding chr8:94936268 chr8:94936269 . . 0 hm6A_associated_SNPs_10779 1 0 0 1 94936258 94936278 mRNA hsa-miR-101 PDP1 miRanda miRanda
14034 chr8 94936467 94936467 1 + T C rs78884124 94936465 + 94936445 94936485 41 TTTGTTTTTGTGATTATTTGACTGGAATGCTTCTTAAGTGG TTTGTTTTTGTGATTATTTGACCGGAATGCTTCTTAAGTGG < 41bp 1 0.0639720443556435 1 0.539814114570618 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 23 PDP1 ENSG00000164951 UTR3 Human protein_coding chr8:94936465 chr8:94936467 . . 0 hm6A_associated_SNPs_10780 1 0 1 1 94936444 94936471 mRNA hsa-miR-145 PDP1 miRanda miRanda
14034 chr8 94937637 94937637 1 + G C rs116788695 94937643 + 94937623 94937663 41 ATTTATTTCTAAATGTTTTGACTGGGCATTTTTCTTTTAAT ATTTATTTCTAAATCTTTTGACTGGGCATTTTTCTTTTAAT < 41bp 1 0.0930656940442692 1 0.937749803066254 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 PDP1 ENSG00000164951 UTR3 Human protein_coding chr8:94937643 chr8:94937637 . . 0 hm6A_associated_SNPs_10786 1 0 1 1 94937631 94937653 mRNA hsa-miR-365 PDP1 miRanda miRanda
14034 chr8 95805155 95805155 1 + G T rs144304726 95805150 + 95805130 95805170 41 TTTAGCCTCCCAAATGCCAGACAAAGAATCTAACATAAAAT TTTAGCCTCCCAAATGCCAGACAAATAATCTAACATAAAAT < 41bp 1 0.0695591669837145 1 0.0467222332954407 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 26 DPY19L4 ENSG00000254307 ncRNA_exonic Human antisense chr8:95805150 chr8:95805155 . . 0 hm6A_associated_SNPs_10792 0 0 0 1 95805151 95805172 mRNA hsa-miR-590-3p DPY19L4 miRanda miRanda
14034 chr8 95877787 95877787 1 + T C rs713113 95877804 + 95877784 95877824 41 AAGTAGACGGACTGCCAAAGACCTTTGGGAAGTTGTTGTTC AAGCAGACGGACTGCCAAAGACCTTTGGGAAGTTGTTGTTC < 41bp 1 0.278286054147704 1 0.982306599617004 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 4 INTS8 ENSG00000164941 CDS Human protein_coding chr8:95877804 chr8:95877787 synonymous SNV . 0 hm6A_associated_SNPs_10793 0 0 1 1 95877784 95877806 mRNA hsa-miR-431 INTS8 miRanda miRanda
14034 chr8 98738067 98738067 1 + T G rs375388942 98738084 + 98738064 98738104 41 AACTGGCAGGTATCTTTGTAACTATAAATAGTGCATGCTCA AACGGGCAGGTATCTTTGTAACTATAAATAGTGCATGCTCA < 41bp 1 0.282560548101426 1 0.781822383403778 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 MTDH ENSG00000147649 UTR3 Human protein_coding chr8:98738084 chr8:98738067 . . 0 hm6A_associated_SNPs_10800 0 0 1 1 98738055 98738077 mRNA hsa-miR-875-5p MTDH miRanda miRanda
14034 chr8 98738328 98738328 1 + C T rs114982405 98738308 + 98738288 98738328 41 CAATGTTGTCATTATATTTGACTGTGGTTCAACAGTATTGC CAATGTTGTCATTATATTTGACTGTGGTTCAACAGTATTGT < 41bp 1 0.390811305297096 1 0.927734017372131 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 MTDH ENSG00000147649 UTR3 Human protein_coding chr8:98738308 chr8:98738328 . . 0 hm6A_associated_SNPs_10802 0 0 1 1 98738326 98738345 mRNA hsa-miR-384 MTDH miRanda miRanda
14034 chr8 98863876 98863876 1 + G A rs1136594 98863879 + 98863859 98863899 41 TCAACATATGCTTTGCTGGAACACTGTGATAGATTAACTGT TCAACATATGCTTTGCTAGAACACTGTGATAGATTAACTGT < 41bp 1 0.69600988584451 1 0.496932625770569 experiment 0.607980228310979 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 LAPTM4B ENSG00000104341 UTR3 Human protein_coding chr8:98863879 chr8:98863876 . . 0 hm6A_associated_SNPs_10812 0 0 1 3 98863868 98863888 mRNA hsa-miR-27a LAPTM4B miRanda miRanda
14034 chr8 98863876 98863876 1 + G A rs1136594 98863879 + 98863859 98863899 41 TCAACATATGCTTTGCTGGAACACTGTGATAGATTAACTGT TCAACATATGCTTTGCTAGAACACTGTGATAGATTAACTGT < 41bp 1 0.69600988584451 1 0.496932625770569 experiment 0.607980228310979 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 LAPTM4B ENSG00000104341 UTR3 Human protein_coding chr8:98863879 chr8:98863876 . . 0 hm6A_associated_SNPs_10812 0 0 1 3 98863868 98863888 mRNA hsa-miR-27b LAPTM4B miRanda miRanda
14034 chr8 98863876 98863876 1 + G A rs1136594 98863879 + 98863859 98863899 41 TCAACATATGCTTTGCTGGAACACTGTGATAGATTAACTGT TCAACATATGCTTTGCTAGAACACTGTGATAGATTAACTGT < 41bp 1 0.69600988584451 1 0.496932625770569 experiment 0.607980228310979 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 LAPTM4B ENSG00000104341 UTR3 Human protein_coding chr8:98863879 chr8:98863876 . . 0 hm6A_associated_SNPs_10812 0 0 1 3 98863867 98863887 mRNA hsa-miR-128 LAPTM4B miRanda miRanda
14034 chr8 98864323 98864323 1 + G A rs8879 98864327 + 98864307 98864347 41 GGAGCAGTGACCATCTGCTGACTGTTCTTGTGGATCTTGTG GGAGCAGTGACCATCTACTGACTGTTCTTGTGGATCTTGTG < 41bp 1 0.339486054303337 1 0.935467064380646 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 LAPTM4B ENSG00000104341 UTR3 Human protein_coding chr8:98864327 chr8:98864323 . . 0 hm6A_associated_SNPs_10815 0 0 1 2 98864309 98864333 mRNA hsa-miR-212 LAPTM4B miRanda miRanda
14034 chr8 98864323 98864323 1 + G A rs8879 98864327 + 98864307 98864347 41 GGAGCAGTGACCATCTGCTGACTGTTCTTGTGGATCTTGTG GGAGCAGTGACCATCTACTGACTGTTCTTGTGGATCTTGTG < 41bp 1 0.339486054303337 1 0.935467064380646 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 LAPTM4B ENSG00000104341 UTR3 Human protein_coding chr8:98864327 chr8:98864323 . . 0 hm6A_associated_SNPs_10815 0 0 1 2 98864314 98864333 mRNA hsa-miR-132 LAPTM4B miRanda miRanda
14034 chr8 99105698 99105698 1 + A G rs73701240 99105695 + 99105675 99105715 41 GTTATAGAGAGACTGTTGGAACCATGAGAAGGATGTTTCTG GTTATAGAGAGACTGTTGGAACCGTGAGAAGGATGTTTCTG < 41bp 1 0.0348829188154004 1 0.598741114139557 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 24 ERICH5 ENSG00000177459 UTR3 Human protein_coding chr8:99105695 chr8:99105698 . . 0 hm6A_associated_SNPs_10820 0 0 1 1 99105693 99105714 mRNA hsa-miR-494 C8orf47 miRanda miRanda
14034 chr8 101166064 101166064 1 + G A rs541222064 101166067 + 101166047 101166087 41 ATTTTTTGTTCCATTACGTGACTTTTTGTTTTATTGTATAT ATTTTTTGTTCCATTACATGACTTTTTGTTTTATTGTATAT < 41bp 1 0.181274090413549 1 0.00601986050605774 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 POLR2K ENSG00000147669 UTR3 Human protein_coding chr8:101166067 chr8:101166064 . . 0 hm6A_associated_SNPs_10827 0 0 1 2 101166050 101166071 mRNA hsa-miR-224 POLR2K miRanda miRanda
14034 chr8 101166064 101166064 1 + G A rs541222064 101166067 + 101166047 101166087 41 ATTTTTTGTTCCATTACGTGACTTTTTGTTTTATTGTATAT ATTTTTTGTTCCATTACATGACTTTTTGTTTTATTGTATAT < 41bp 1 0.181274090413549 1 0.00601986050605774 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 POLR2K ENSG00000147669 UTR3 Human protein_coding chr8:101166067 chr8:101166064 . . 0 hm6A_associated_SNPs_10827 0 0 1 2 101166056 101166077 mRNA hsa-miR-495 POLR2K miRanda miRanda
14034 chr8 104344756 104344756 1 + G A rs76714224 104344736 + 104344716 104344756 41 GCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCG GCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCA < 41bp 1 0.330441053729848 1 0.51695841550827 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 FZD6 ENSG00000164930 UTR3 Human protein_coding chr8:104344736 chr8:104344756 . . 0 hm6A_associated_SNPs_10837 0 0 1 3 104344749 104344771 mRNA hsa-miR-25 FZD6 miRanda miRanda
14034 chr8 104344756 104344756 1 + G A rs76714224 104344736 + 104344716 104344756 41 GCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCG GCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCA < 41bp 1 0.330441053729848 1 0.51695841550827 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 FZD6 ENSG00000164930 UTR3 Human protein_coding chr8:104344736 chr8:104344756 . . 0 hm6A_associated_SNPs_10837 0 0 1 3 104344747 104344770 mRNA hsa-miR-96 FZD6 miRanda miRanda
14034 chr8 104344756 104344756 1 + G A rs76714224 104344736 + 104344716 104344756 41 GCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCG GCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCA < 41bp 1 0.330441053729848 1 0.51695841550827 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 FZD6 ENSG00000164930 UTR3 Human protein_coding chr8:104344736 chr8:104344756 . . 0 hm6A_associated_SNPs_10837 0 0 1 3 104344745 104344770 mRNA hsa-miR-1271 FZD6 miRanda miRanda
14034 chr8 104344790 104344790 1 + T C rs2687355 104344798 + 104344778 104344818 41 AAAAAAGGTAGTTTTAATAAACAAGACACAACGTTTTTATA AAAAAAGGTAGTCTTAATAAACAAGACACAACGTTTTTATA < 41bp 1 0.268795893626246 1 0.400341510772705 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 FZD6 ENSG00000164930 UTR3 Human protein_coding chr8:104344798 chr8:104344790 . . 0 hm6A_associated_SNPs_10838 0 0 1 2 104344785 104344805 mRNA hsa-miR-431 FZD6 miRanda miRanda
14034 chr8 104344790 104344790 1 + T C rs2687355 104344798 + 104344778 104344818 41 AAAAAAGGTAGTTTTAATAAACAAGACACAACGTTTTTATA AAAAAAGGTAGTCTTAATAAACAAGACACAACGTTTTTATA < 41bp 1 0.268795893626246 1 0.400341510772705 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 FZD6 ENSG00000164930 UTR3 Human protein_coding chr8:104344798 chr8:104344790 . . 0 hm6A_associated_SNPs_10838 0 0 1 2 104344789 104344809 mRNA hsa-miR-599 FZD6 miRanda miRanda
14034 chr8 109498848 109498848 1 + A G rs148614312 109498846 + 109498826 109498866 41 AAGGTTTCAAAAACTCTTTGACATTAGATTTCACAACTGCA AAGGTTTCAAAAACTCTTTGACGTTAGATTTCACAACTGCA Direct Loss 1 0.680884791761231 1 0.864667236804962 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 23 EMC2 ENSG00000104412 UTR3 Human protein_coding chr8:109498846 chr8:109498848 . . 0 hm6A_associated_SNPs_10847 0 0 1 3 109498838 109498859 mRNA hsa-miR-203 TTC35 miRanda miRanda
14034 chr8 109498848 109498848 1 + A G rs148614312 109498846 + 109498826 109498866 41 AAGGTTTCAAAAACTCTTTGACATTAGATTTCACAACTGCA AAGGTTTCAAAAACTCTTTGACGTTAGATTTCACAACTGCA Direct Loss 1 0.680884791761231 1 0.864667236804962 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 23 EMC2 ENSG00000104412 UTR3 Human protein_coding chr8:109498846 chr8:109498848 . . 0 hm6A_associated_SNPs_10847 0 0 1 3 109498847 109498868 mRNA hsa-miR-223 TTC35 miRanda miRanda
14034 chr8 109498848 109498848 1 + A G rs148614312 109498846 + 109498826 109498866 41 AAGGTTTCAAAAACTCTTTGACATTAGATTTCACAACTGCA AAGGTTTCAAAAACTCTTTGACGTTAGATTTCACAACTGCA Direct Loss 1 0.680884791761231 1 0.864667236804962 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 23 EMC2 ENSG00000104412 UTR3 Human protein_coding chr8:109498846 chr8:109498848 . . 0 hm6A_associated_SNPs_10847 0 0 1 3 109498841 109498862 mRNA hsa-miR-758 TTC35 miRanda miRanda
14034 chr8 120257375 120257375 1 + G A rs115212584 120257368 + 120257348 120257388 41 GACAGAAGACATGAGGAAAAACAAAAGGTTTGAGGAAATCA GACAGAAGACATGAGGAAAAACAAAAGATTTGAGGAAATCA < 41bp 1 0.561888783389117 1 0.504996716976166 experiment 0.876222433221766 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 MAL2 ENSG00000253972 ncRNA_intronic Human lincRNA chr8:120257368 chr8:120257375 . . 0 hm6A_associated_SNPs_10849 0 0 1 1 120257363 120257382 mRNA hsa-miR-371-5p MAL2 miRanda miRanda
14034 chr8 123986522 123986522 1 + G C rs117127698 123986504 + 123986484 123986524 41 GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAGTG GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGACTG < 41bp 1 0.496583056161401 1 0.45062130689621 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986504 chr8:123986522 . . 0 hm6A_associated_SNPs_10851 0 0 1 7 123986509 123986531 mRNA hsa-miR-17 ZHX2 miRanda miRanda
14034 chr8 123986522 123986522 1 + G C rs117127698 123986504 + 123986484 123986524 41 GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAGTG GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGACTG < 41bp 1 0.496583056161401 1 0.45062130689621 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986504 chr8:123986522 . . 0 hm6A_associated_SNPs_10851 0 0 1 7 123986509 123986531 mRNA hsa-miR-20a ZHX2 miRanda miRanda
14034 chr8 123986522 123986522 1 + G C rs117127698 123986504 + 123986484 123986524 41 GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAGTG GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGACTG < 41bp 1 0.496583056161401 1 0.45062130689621 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986504 chr8:123986522 . . 0 hm6A_associated_SNPs_10851 0 0 1 7 123986510 123986531 mRNA hsa-miR-93 ZHX2 miRanda miRanda
14034 chr8 123986522 123986522 1 + G C rs117127698 123986504 + 123986484 123986524 41 GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAGTG GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGACTG < 41bp 1 0.496583056161401 1 0.45062130689621 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986504 chr8:123986522 . . 0 hm6A_associated_SNPs_10851 0 0 1 7 123986509 123986531 mRNA hsa-miR-106a ZHX2 miRanda miRanda
14034 chr8 123986522 123986522 1 + G C rs117127698 123986504 + 123986484 123986524 41 GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAGTG GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGACTG < 41bp 1 0.496583056161401 1 0.45062130689621 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986504 chr8:123986522 . . 0 hm6A_associated_SNPs_10851 0 0 1 7 123986511 123986531 mRNA hsa-miR-106b ZHX2 miRanda miRanda
14034 chr8 123986522 123986522 1 + G C rs117127698 123986504 + 123986484 123986524 41 GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAGTG GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGACTG < 41bp 1 0.496583056161401 1 0.45062130689621 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986504 chr8:123986522 . . 0 hm6A_associated_SNPs_10851 0 0 1 7 123986509 123986531 mRNA hsa-miR-20b ZHX2 miRanda miRanda
14034 chr8 123986522 123986522 1 + G C rs117127698 123986504 + 123986484 123986524 41 GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAGTG GTGTGTGTGTTTGTTTTGGGACAATTTTAGATACCTGACTG < 41bp 1 0.496583056161401 1 0.45062130689621 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986504 chr8:123986522 . . 0 hm6A_associated_SNPs_10851 0 0 1 7 123986509 123986531 mRNA hsa-miR-519d ZHX2 miRanda miRanda
14034 chr8 123986559 123986559 1 + G A rs540386311 123986571 + 123986551 123986591 41 AAAAGAAGGAAAACCAAGAGACATATCTGGTGTACGTGTTG AAAAGAAGAAAAACCAAGAGACATATCTGGTGTACGTGTTG < 41bp 1 0.488431622511768 1 0.789277076721191 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986571 chr8:123986559 . . 0 hm6A_associated_SNPs_10852 0 0 1 2 123986557 123986578 mRNA hsa-miR-190 ZHX2 miRanda miRanda
14034 chr8 123986559 123986559 1 + G A rs540386311 123986571 + 123986551 123986591 41 AAAAGAAGGAAAACCAAGAGACATATCTGGTGTACGTGTTG AAAAGAAGAAAAACCAAGAGACATATCTGGTGTACGTGTTG < 41bp 1 0.488431622511768 1 0.789277076721191 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 ZHX2 ENSG00000178764 UTR3 Human protein_coding chr8:123986571 chr8:123986559 . . 0 hm6A_associated_SNPs_10852 0 0 1 2 123986555 123986578 mRNA hsa-miR-190b ZHX2 miRanda miRanda
14034 chr8 124117620 124117620 1 + A G rs138654175 124117606 + 124117586 124117626 41 GTGATCTTAAGATGAAAGTAACATCAGGGAGAGTACAGCAG GTGATCTTAAGATGAAAGTAACATCAGGGAGAGTGCAGCAG < 41bp 1 0.420572228393202 1 0.0258834064006805 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124117606 chr8:124117620 synonymous SNV . 0 hm6A_associated_SNPs_10853 0 0 1 1 124117610 124117632 mRNA hsa-miR-138 WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140624 124140644 mRNA hsa-miR-148a WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140624 124140643 mRNA hsa-miR-130a WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140625 124140644 mRNA hsa-miR-152 WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140621 124140643 mRNA hsa-miR-301a WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140622 124140643 mRNA hsa-miR-130b WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140624 124140644 mRNA hsa-miR-148b WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140621 124140643 mRNA hsa-miR-454 WDR67 miRanda miRanda
14034 chr8 124140634 124140634 1 + T C rs2385167 124140644 + 124140624 124140664 41 TTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTA TTAATGTTTTCGTTGCACTGACAAAAGGGCAGTATCCAGTA < 41bp 1 0.690930859494357 1 0.894833028316498 experiment 0.618138281011287 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124140644 chr8:124140634 synonymous SNV . 0 hm6A_associated_SNPs_10854 0 0 1 8 124140621 124140643 mRNA hsa-miR-301b WDR67 miRanda miRanda
14034 chr8 124454095 124454095 1 + C A rs139416705 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAAAATTTGAATGTGCTGTTGTC Direct Loss 1 0.542146228920361 1 0.385402530431747 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454095 . . 0 hm6A_associated_SNPs_10857 0 0 1 4 124454085 124454106 mRNA hsa-miR-181a WDYHV1 miRanda miRanda
14034 chr8 124454095 124454095 1 + C A rs139416705 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAAAATTTGAATGTGCTGTTGTC Direct Loss 1 0.542146228920361 1 0.385402530431747 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454095 . . 0 hm6A_associated_SNPs_10857 0 0 1 4 124454084 124454106 mRNA hsa-miR-181b WDYHV1 miRanda miRanda
14034 chr8 124454095 124454095 1 + C A rs139416705 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAAAATTTGAATGTGCTGTTGTC Direct Loss 1 0.542146228920361 1 0.385402530431747 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454095 . . 0 hm6A_associated_SNPs_10857 0 0 1 4 124454086 124454106 mRNA hsa-miR-181c WDYHV1 miRanda miRanda
14034 chr8 124454095 124454095 1 + C A rs139416705 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAAAATTTGAATGTGCTGTTGTC Direct Loss 1 0.542146228920361 1 0.385402530431747 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454095 . . 0 hm6A_associated_SNPs_10857 0 0 1 4 124454083 124454106 mRNA hsa-miR-181d WDYHV1 miRanda miRanda
14034 chr8 124454097 124454097 1 + T G rs113151923 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAACAGTTGAATGTGCTGTTGTC < 41bp 1 0.452528224538509 1 0.587527096271515 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454097 . . 0 hm6A_associated_SNPs_10858 0 0 1 4 124454085 124454106 mRNA hsa-miR-181a WDYHV1 miRanda miRanda
14034 chr8 124454097 124454097 1 + T G rs113151923 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAACAGTTGAATGTGCTGTTGTC < 41bp 1 0.452528224538509 1 0.587527096271515 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454097 . . 0 hm6A_associated_SNPs_10858 0 0 1 4 124454084 124454106 mRNA hsa-miR-181b WDYHV1 miRanda miRanda
14034 chr8 124454097 124454097 1 + T G rs113151923 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAACAGTTGAATGTGCTGTTGTC < 41bp 1 0.452528224538509 1 0.587527096271515 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454097 . . 0 hm6A_associated_SNPs_10858 0 0 1 4 124454086 124454106 mRNA hsa-miR-181c WDYHV1 miRanda miRanda
14034 chr8 124454097 124454097 1 + T G rs113151923 124454094 + 124454074 124454114 41 CCCATAAAATGTTTTCTTGAACATTTGAATGTGCTGTTGTC CCCATAAAATGTTTTCTTGAACAGTTGAATGTGCTGTTGTC < 41bp 1 0.452528224538509 1 0.587527096271515 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124454094 chr8:124454097 . . 0 hm6A_associated_SNPs_10858 0 0 1 4 124454083 124454106 mRNA hsa-miR-181d WDYHV1 miRanda miRanda
14034 chr8 124825274 124825274 1 + A G rs115824710 124825291 + 124825271 124825311 41 TTTATATGTTAGTTTATCAAACATAAATCTTGTTTAATTTT TTTGTATGTTAGTTTATCAAACATAAATCTTGTTTAATTTT < 41bp 1 0.530006708873946 1 0.375876933336258 experiment 0.939986582252107 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 4 FAM91A1 ENSG00000176853 UTR3 Human protein_coding chr8:124825291 chr8:124825274 . . 0 hm6A_associated_SNPs_10861 0 0 1 1 124825258 124825278 mRNA hsa-miR-410 FAM91A1 miRanda miRanda
14034 chr8 125464970 125464970 1 + A G rs75192605 125464956 + 125464936 125464976 41 GGCTACCATATAGAAAATTGACTGAAGGAGGGCCAAGATGG GGCTACCATATAGAAAATTGACTGAAGGAGGGCCGAGATGG < 41bp 1 0.657108395725592 1 0.479008853435516 experiment 0.685783208548816 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TRMT12 ENSG00000183665 UTR3 Human protein_coding chr8:125464956 chr8:125464970 . . 0 hm6A_associated_SNPs_10862 0 0 1 2 125464968 125464992 mRNA hsa-miR-149 TRMT12 miRanda miRanda
14034 chr8 125464970 125464970 1 + A G rs75192605 125464956 + 125464936 125464976 41 GGCTACCATATAGAAAATTGACTGAAGGAGGGCCAAGATGG GGCTACCATATAGAAAATTGACTGAAGGAGGGCCGAGATGG < 41bp 1 0.657108395725592 1 0.479008853435516 experiment 0.685783208548816 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TRMT12 ENSG00000183665 UTR3 Human protein_coding chr8:125464956 chr8:125464970 . . 0 hm6A_associated_SNPs_10862 0 0 1 2 125464950 125464971 mRNA hsa-miR-328 TRMT12 miRanda miRanda
14034 chr8 126449406 126449406 1 + C T rs17405319 126449416 + 126449396 126449436 41 ACTTACCAGCCGAACGTGGAACAGTATCACAAAAGATTCCA ACTTACCAGCTGAACGTGGAACAGTATCACAAAAGATTCCA < 41bp 1 0.578972589408012 1 0.975128531455994 experiment 0.842054821183977 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 TRIB1 ENSG00000173334 UTR3 Human protein_coding chr8:126449416 chr8:126449406 . . 0 hm6A_associated_SNPs_10874 0 0 1 1 126449403 126449424 mRNA hsa-miR-190b TRIB1 miRanda miRanda
14034 chr8 128902985 128902985 1 + G A rs529438785 128902980 + 128902960 128903000 41 TGGGGAATAACGCTGGTGGAACCATGCACTGGAATGACACA TGGGGAATAACGCTGGTGGAACCATACACTGGAATGACACA < 41bp 1 0.344709178639022 1 0.907823920249939 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PVT1 ENSG00000249859 ncRNA_exonic Human lincRNA chr8:128902980 chr8:128902985 . . 0 hm6A_associated_SNPs_10882 0 0 1 6 128902970 128902991 mRNA hsa-miR-148a PVT1 miRanda miRanda
14034 chr8 128902985 128902985 1 + G A rs529438785 128902980 + 128902960 128903000 41 TGGGGAATAACGCTGGTGGAACCATGCACTGGAATGACACA TGGGGAATAACGCTGGTGGAACCATACACTGGAATGACACA < 41bp 1 0.344709178639022 1 0.907823920249939 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PVT1 ENSG00000249859 ncRNA_exonic Human lincRNA chr8:128902980 chr8:128902985 . . 0 hm6A_associated_SNPs_10882 0 0 1 6 128902971 128902991 mRNA hsa-miR-152 PVT1 miRanda miRanda
14034 chr8 128902985 128902985 1 + G A rs529438785 128902980 + 128902960 128903000 41 TGGGGAATAACGCTGGTGGAACCATGCACTGGAATGACACA TGGGGAATAACGCTGGTGGAACCATACACTGGAATGACACA < 41bp 1 0.344709178639022 1 0.907823920249939 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PVT1 ENSG00000249859 ncRNA_exonic Human lincRNA chr8:128902980 chr8:128902985 . . 0 hm6A_associated_SNPs_10882 0 0 1 6 128902970 128902991 mRNA hsa-miR-148b PVT1 miRanda miRanda
14034 chr8 128902985 128902985 1 + G A rs529438785 128902980 + 128902960 128903000 41 TGGGGAATAACGCTGGTGGAACCATGCACTGGAATGACACA TGGGGAATAACGCTGGTGGAACCATACACTGGAATGACACA < 41bp 1 0.344709178639022 1 0.907823920249939 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PVT1 ENSG00000249859 ncRNA_exonic Human lincRNA chr8:128902980 chr8:128902985 . . 0 hm6A_associated_SNPs_10882 0 0 1 6 128902970 128902991 lncRNA hsa-miR-148a-3p PVT1 miRanda starBase2
14034 chr8 128902985 128902985 1 + G A rs529438785 128902980 + 128902960 128903000 41 TGGGGAATAACGCTGGTGGAACCATGCACTGGAATGACACA TGGGGAATAACGCTGGTGGAACCATACACTGGAATGACACA < 41bp 1 0.344709178639022 1 0.907823920249939 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PVT1 ENSG00000249859 ncRNA_exonic Human lincRNA chr8:128902980 chr8:128902985 . . 0 hm6A_associated_SNPs_10882 0 0 1 6 128902970 128902991 lncRNA hsa-miR-148b-3p PVT1 miRanda starBase2
14034 chr8 128902985 128902985 1 + G A rs529438785 128902980 + 128902960 128903000 41 TGGGGAATAACGCTGGTGGAACCATGCACTGGAATGACACA TGGGGAATAACGCTGGTGGAACCATACACTGGAATGACACA < 41bp 1 0.344709178639022 1 0.907823920249939 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PVT1 ENSG00000249859 ncRNA_exonic Human lincRNA chr8:128902980 chr8:128902985 . . 0 hm6A_associated_SNPs_10882 0 0 1 6 128902971 128902991 lncRNA hsa-miR-152-3p PVT1 miRanda starBase2
14034 chr8 133023712 133023712 1 + A G rs77143518 133023717 + 133023697 133023737 41 ATCTTCTTCACAATAATAGGACATCTGTTGAATAGCATTCC ATCTTCTTCACAATAGTAGGACATCTGTTGAATAGCATTCC < 41bp 1 0.687169816326365 1 0.194838762283325 experiment 0.62566036734727 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 EFR3A ENSG00000132294 UTR3 Human protein_coding chr8:133023717 chr8:133023712 . . 0 hm6A_associated_SNPs_10884 0 0 1 1 133023702 133023728 mRNA hsa-miR-421 EFR3A miRanda miRanda
14034 chr8 133816912 133816912 1 + A G rs148199331 133816920 + 133816900 133816940 41 GCCAGAGAGCACATTATCAAACAAGAGGAAAAATAATCAAG GCCAGAGAGCACGTTATCAAACAAGAGGAAAAATAATCAAG < 41bp 1 0.780874869181424 1 0.899603843688965 experiment 0.438250261637152 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133816920 chr8:133816912 synonymous SNV . 0 hm6A_associated_SNPs_10886 0 0 1 1 133816893 133816914 mRNA hsa-miR-455-5p PHF20L1 miRanda miRanda
14034 chr8 141525327 141525327 1 + A G rs2231524 141525324 + 141525304 141525344 41 TGACAATGATAATGAAAGTGACCATGATGAAGCTGACTCCT TGACAATGATAATGAAAGTGACCGTGATGAAGCTGACTCCT < 41bp 1 0.773530390500522 1 0.990713000297546 experiment 0.452939218998956 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 CHRAC1 ENSG00000104472 CDS Human protein_coding chr8:141525324 chr8:141525327 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_10892 0 0 1 1 141525316 141525338 mRNA hsa-miR-21 CHRAC1 miRanda miRanda
14034 chr8 143764001 143764001 1 + G A rs2976396 143763990 + 143763970 143764010 41 GATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACG GATGAAGTGGACTGAGTAGAACTGGAGGACAAGAGTCGACG < 41bp 1 0.232484756886365 1 0.940772414207458 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 PSCA ENSG00000167653 UTR3 Human protein_coding chr8:143763990 chr8:143764001 . . 0 hm6A_associated_SNPs_10907 0 0 1 1 143763984 143764007 mRNA hsa-miR-504 PSCA miRanda miRanda
14034 chr8 143784833 143784833 1 + G A rs141099446 143784840 + 143784820 143784860 41 GGAGCATGGACTCGCTCCAGACCGTTGTCACCTGTTGCATT GGAGCATGGACTCACTCCAGACCGTTGTCACCTGTTGCATT < 41bp 1 0.417937618199741 1 0.917828321456909 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 LOC100288181 ENSG00000253741 ncRNA_exonic Human antisense chr8:143784840 chr8:143784833 . . 0 hm6A_associated_SNPs_10909 0 0 1 1 143784832 143784854 mRNA hsa-miR-125a-3p LY6K miRanda miRanda
14034 chr8 143784837 143784837 1 + C G rs186867787 143784840 + 143784820 143784860 41 GGAGCATGGACTCGCTCCAGACCGTTGTCACCTGTTGCATT GGAGCATGGACTCGCTCGAGACCGTTGTCACCTGTTGCATT < 41bp 1 0.381919112805508 1 0.916949868202209 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 LOC100288181 ENSG00000253741 ncRNA_exonic Human antisense chr8:143784840 chr8:143784837 . . 0 hm6A_associated_SNPs_10910 0 0 1 1 143784832 143784854 mRNA hsa-miR-125a-3p LY6K miRanda miRanda
14034 chr8 144103467 144103467 1 + C T rs11547124 144103482 + 144103462 144103502 41 TCTTACGGTCCAACATCAGGACCAAGTCCCATGGACATGCT TCTTATGGTCCAACATCAGGACCAAGTCCCATGGACATGCT < 41bp 1 0.748720698785857 1 0.946006536483765 experiment 0.502558602428286 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 LY6E ENSG00000160932 UTR3 Human protein_coding chr8:144103482 chr8:144103467 . . 0 hm6A_associated_SNPs_10918 0 0 1 2 144103466 144103487 mRNA hsa-miR-133a LY6E miRanda miRanda
14034 chr8 144103467 144103467 1 + C T rs11547124 144103482 + 144103462 144103502 41 TCTTACGGTCCAACATCAGGACCAAGTCCCATGGACATGCT TCTTATGGTCCAACATCAGGACCAAGTCCCATGGACATGCT < 41bp 1 0.748720698785857 1 0.946006536483765 experiment 0.502558602428286 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 LY6E ENSG00000160932 UTR3 Human protein_coding chr8:144103482 chr8:144103467 . . 0 hm6A_associated_SNPs_10918 0 0 1 2 144103466 144103487 mRNA hsa-miR-133b LY6E miRanda miRanda
14034 chr8 144682028 144682028 1 + C T rs73379054 144682019 + 144681999 144682039 41 GTGACCAGGCCAGCCCAGTGACCTTTCTCCTGCTGCACTTG GTGACCAGGCCAGCCCAGTGACCTTTCTCTTGCTGCACTTG < 41bp 1 0.717884093406503 1 0.899098515510559 experiment 0.564231813186995 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 TIGD5 ENSG00000179886 UTR3 Human protein_coding chr8:144682019 chr8:144682028 . . 0 hm6A_associated_SNPs_10930 0 0 1 1 144682015 144682034 mRNA hsa-miR-214 TIGD5 miRanda miRanda
14034 chr8 145162235 145162235 1 + A G rs538591281 145162225 + 145162205 145162245 41 GCTGCCCATGCTGTGGCCGGACTTGTCAGCAGGGGGCCTGG GCTGCCCATGCTGTGGCCGGACTTGTCAGCGGGGGGCCTGG < 41bp 1 0.758140773253171 1 0.983630180358887 experiment 0.483718453493658 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 31 MAF1 ENSG00000179632 UTR3 Human protein_coding chr8:145162225 chr8:145162235 . . 0 hm6A_associated_SNPs_10954 0 0 1 1 145162217 145162238 mRNA hsa-miR-370 MAF1 miRanda miRanda
14034 chr8 145162285 145162285 1 + C A rs73381311 145162275 + 145162255 145162295 41 CGACTGCCCTGCCCAAATGAACTGCCACAGCAGGGACAGCT CGACTGCCCTGCCCAAATGAACTGCCACAGAAGGGACAGCT < 41bp 1 0.697824313913776 1 0.991224408149719 experiment 0.604351372172447 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 31 MAF1 ENSG00000179632 UTR3 Human protein_coding chr8:145162275 chr8:145162285 . . 0 hm6A_associated_SNPs_10955 0 0 1 1 145162268 145162289 mRNA hsa-miR-370 MAF1 miRanda miRanda
14034 chr8 145162285 145162285 1 + C A rs73381311 145162290 + 145162270 145162310 41 AATGAACTGCCACAGCAGGGACAGCTGGACCGCAGAGTTTA AATGAACTGCCACAGAAGGGACAGCTGGACCGCAGAGTTTA < 41bp 1 0.70363887796681 1 0.987028658390045 experiment 0.59272224406638 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 MAF1 ENSG00000179632 UTR3 Human protein_coding chr8:145162290 chr8:145162285 . . 0 hm6A_associated_SNPs_10956 0 0 1 1 145162268 145162289 mRNA hsa-miR-370 MAF1 miRanda miRanda
14034 chr8 145162285 145162285 1 + C A rs73381311 145162298 + 145162278 145162318 41 GCCACAGCAGGGACAGCTGGACCGCAGAGTTTATTTTTGTA GCCACAGAAGGGACAGCTGGACCGCAGAGTTTATTTTTGTA < 41bp 1 0.422536163632893 1 0.983142673969269 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 8 MAF1 ENSG00000179632 UTR3 Human protein_coding chr8:145162298 chr8:145162285 . . 0 hm6A_associated_SNPs_10957 0 0 1 1 145162268 145162289 mRNA hsa-miR-370 MAF1 miRanda miRanda
14034 chr8 145727443 145727443 1 + T C rs79355846 145727428 + 145727408 145727448 41 GGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGATGTCTG GGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGACGTCTG < 41bp 1 0.653661677623663 1 0.953828573226929 experiment 0.692676644752675 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 PPP1R16A ENSG00000255182 ncRNA_intronic Human processed_transcript chr8:145727428 chr8:145727443 . . 0 hm6A_associated_SNPs_10981 0 0 1 1 145727439 145727460 mRNA hsa-miR-431 PPP1R16A miRanda miRanda
14034 chr9 5462876 5462876 1 + C G rs17718883 5462895 + 5462875 5462915 41 CCAGTCACCTCTGAACATGAACTGACATGTCAGGCTGAGGG CGAGTCACCTCTGAACATGAACTGACATGTCAGGCTGAGGG < 41bp 1 0.360611522759367 1 0.942386507987976 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462895 chr9:5462876 nonsynonymous SNV 0.054 3 hm6A_associated_SNPs_11015 0 0 0 1 5462858 5462883 mRNA hsa-miR-134 CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462895 + 5462875 5462915 41 CCAGTCACCTCTGAACATGAACTGACATGTCAGGCTGAGGG CCAGTCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGG < 41bp 1 0.362414252539075 1 0.905836939811707 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462895 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11016 0 0 0 4 5462880 5462905 mRNA hsa-miR-181b CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462895 + 5462875 5462915 41 CCAGTCACCTCTGAACATGAACTGACATGTCAGGCTGAGGG CCAGTCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGG < 41bp 1 0.362414252539075 1 0.905836939811707 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462895 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11016 0 0 0 4 5462880 5462901 mRNA hsa-miR-223 CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462895 + 5462875 5462915 41 CCAGTCACCTCTGAACATGAACTGACATGTCAGGCTGAGGG CCAGTCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGG < 41bp 1 0.362414252539075 1 0.905836939811707 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462895 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11016 0 0 0 4 5462858 5462883 mRNA hsa-miR-134 CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462895 + 5462875 5462915 41 CCAGTCACCTCTGAACATGAACTGACATGTCAGGCTGAGGG CCAGTCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGG < 41bp 1 0.362414252539075 1 0.905836939811707 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462895 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11016 0 0 0 4 5462880 5462905 mRNA hsa-miR-181d CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462899 + 5462879 5462919 41 TCACCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC TCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC < 41bp 1 0.742984401065133 1 0.752483248710632 experiment 0.514031197869734 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462899 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11017 0 0 0 4 5462880 5462905 mRNA hsa-miR-181b CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462899 + 5462879 5462919 41 TCACCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC TCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC < 41bp 1 0.742984401065133 1 0.752483248710632 experiment 0.514031197869734 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462899 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11017 0 0 0 4 5462880 5462901 mRNA hsa-miR-223 CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462899 + 5462879 5462919 41 TCACCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC TCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC < 41bp 1 0.742984401065133 1 0.752483248710632 experiment 0.514031197869734 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462899 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11017 0 0 0 4 5462858 5462883 mRNA hsa-miR-134 CD274 miRanda miRanda
14034 chr9 5462881 5462881 1 + A T rs140045210 5462899 + 5462879 5462919 41 TCACCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC TCTCCTCTGAACATGAACTGACATGTCAGGCTGAGGGCTAC < 41bp 1 0.742984401065133 1 0.752483248710632 experiment 0.514031197869734 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 CD274 ENSG00000120217 CDS Human protein_coding chr9:5462899 chr9:5462881 nonsynonymous SNV 0.377 2 hm6A_associated_SNPs_11017 0 0 0 4 5462880 5462905 mRNA hsa-miR-181d CD274 miRanda miRanda
14034 chr9 5775222 5775222 1 + A C rs41280739 5775229 + 5775209 5775249 41 TGTAAATTGAATAAAGATGGACTTCTATGTAAATAGACTGC TGTAAATTGAATACAGATGGACTTCTATGTAAATAGACTGC < 41bp 1 0.380748161900172 1 0.979842245578766 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 RIC1 ENSG00000107036 UTR3 Human protein_coding chr9:5775229 chr9:5775222 . . 0 hm6A_associated_SNPs_11018 0 0 1 1 5775219 5775239 mRNA hsa-miR-376c KIAA1432 miRanda miRanda
14034 chr9 15459726 15459726 1 + G A rs113748924 15459728 + 15459708 15459748 41 AAACTACAGATGGGTGACGAACAATGACAGTTTTGCACCAG AAACTACAGATGGGTGACAAACAATGACAGTTTTGCACCAG < 41bp 1 0.781500699242886 1 0.842137694358826 experiment 0.436998601514228 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15459728 chr9:15459726 synonymous SNV . 0 hm6A_associated_SNPs_11029 0 0 1 3 15459725 15459746 mRNA hsa-miR-19a SNAPC3 miRanda miRanda
14034 chr9 15459726 15459726 1 + G A rs113748924 15459728 + 15459708 15459748 41 AAACTACAGATGGGTGACGAACAATGACAGTTTTGCACCAG AAACTACAGATGGGTGACAAACAATGACAGTTTTGCACCAG < 41bp 1 0.781500699242886 1 0.842137694358826 experiment 0.436998601514228 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15459728 chr9:15459726 synonymous SNV . 0 hm6A_associated_SNPs_11029 0 0 1 3 15459724 15459746 mRNA hsa-miR-19b SNAPC3 miRanda miRanda
14034 chr9 15459726 15459726 1 + G A rs113748924 15459728 + 15459708 15459748 41 AAACTACAGATGGGTGACGAACAATGACAGTTTTGCACCAG AAACTACAGATGGGTGACAAACAATGACAGTTTTGCACCAG < 41bp 1 0.781500699242886 1 0.842137694358826 experiment 0.436998601514228 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15459728 chr9:15459726 synonymous SNV . 0 hm6A_associated_SNPs_11029 0 0 1 3 15459717 15459732 mRNA hsa-miR-375 SNAPC3 miRanda miRanda
14034 chr9 19451671 19451671 1 + T G rs117977795 19451668 + 19451648 19451688 41 GAAGAAGAATTATGGCATGAACATTCCCACAGACCCACCAT GAAGAAGAATTATGGCATGAACAGTCCCACAGACCCACCAT < 41bp 1 0.280299386064343 1 0.986301779747009 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 ACER2 ENSG00000177076 UTR3 Human protein_coding chr9:19451668 chr9:19451671 . . 0 hm6A_associated_SNPs_11042 0 0 0 3 19451654 19451675 mRNA hsa-miR-1 ACER2 miRanda miRanda
14034 chr9 19451671 19451671 1 + T G rs117977795 19451668 + 19451648 19451688 41 GAAGAAGAATTATGGCATGAACATTCCCACAGACCCACCAT GAAGAAGAATTATGGCATGAACAGTCCCACAGACCCACCAT < 41bp 1 0.280299386064343 1 0.986301779747009 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 ACER2 ENSG00000177076 UTR3 Human protein_coding chr9:19451668 chr9:19451671 . . 0 hm6A_associated_SNPs_11042 0 0 0 3 19451654 19451675 mRNA hsa-miR-206 ACER2 miRanda miRanda
14034 chr9 19451671 19451671 1 + T G rs117977795 19451668 + 19451648 19451688 41 GAAGAAGAATTATGGCATGAACATTCCCACAGACCCACCAT GAAGAAGAATTATGGCATGAACAGTCCCACAGACCCACCAT < 41bp 1 0.280299386064343 1 0.986301779747009 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 ACER2 ENSG00000177076 UTR3 Human protein_coding chr9:19451668 chr9:19451671 . . 0 hm6A_associated_SNPs_11042 0 0 0 3 19451656 19451675 mRNA hsa-miR-613 ACER2 miRanda miRanda
14034 chr9 20995767 20995767 1 + C G rs560250309 20995770 + 20995750 20995790 41 AAAAGATGGCCACATCACTGACAGCTTGACACATGCCTCCT AAAAGATGGCCACATCAGTGACAGCTTGACACATGCCTCCT < 41bp 1 0.547234862440209 1 0.346257269382477 experiment 0.905530275119581 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 FOCAD ENSG00000188352;ENSG00000188921 UTR3 Human other chr9:20995770 chr9:20995767 . . 0 hm6A_associated_SNPs_11047 0 0 1 2 20995766 20995787 mRNA hsa-miR-34a KIAA1797 miRanda miRanda
14034 chr9 20995767 20995767 1 + C G rs560250309 20995770 + 20995750 20995790 41 AAAAGATGGCCACATCACTGACAGCTTGACACATGCCTCCT AAAAGATGGCCACATCAGTGACAGCTTGACACATGCCTCCT < 41bp 1 0.547234862440209 1 0.346257269382477 experiment 0.905530275119581 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 FOCAD ENSG00000188352;ENSG00000188921 UTR3 Human other chr9:20995770 chr9:20995767 . . 0 hm6A_associated_SNPs_11047 0 0 1 2 20995749 20995771 mRNA hsa-miR-433 KIAA1797 miRanda miRanda
14034 chr9 20995767 20995767 1 + C G rs560250309 20995778 + 20995758 20995798 41 GCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGG GCCACATCAGTGACAGCTTGACACATGCCTCCTAAGAGAGG < 41bp 1 0.56283242018268 1 0.130171090364456 experiment 0.87433515963464 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 FOCAD ENSG00000188352;ENSG00000188921 UTR3 Human other chr9:20995778 chr9:20995767 . . 0 hm6A_associated_SNPs_11048 0 0 1 2 20995766 20995787 mRNA hsa-miR-34a KIAA1797 miRanda miRanda
14034 chr9 20995767 20995767 1 + C G rs560250309 20995778 + 20995758 20995798 41 GCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGG GCCACATCAGTGACAGCTTGACACATGCCTCCTAAGAGAGG < 41bp 1 0.56283242018268 1 0.130171090364456 experiment 0.87433515963464 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 FOCAD ENSG00000188352;ENSG00000188921 UTR3 Human other chr9:20995778 chr9:20995767 . . 0 hm6A_associated_SNPs_11048 0 0 1 2 20995749 20995771 mRNA hsa-miR-433 KIAA1797 miRanda miRanda
14034 chr9 20995789 20995789 1 + C A rs74902521 20995770 + 20995750 20995790 41 AAAAGATGGCCACATCACTGACAGCTTGACACATGCCTCCT AAAAGATGGCCACATCACTGACAGCTTGACACATGCCTCAT < 41bp 1 0.600728715459925 1 0.432720482349396 experiment 0.798542569080149 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 40 FOCAD ENSG00000188352;ENSG00000188921 UTR3 Human other chr9:20995770 chr9:20995789 . . 0 hm6A_associated_SNPs_11049 0 0 1 1 20995786 20995812 mRNA hsa-miR-186 KIAA1797 miRanda miRanda
14034 chr9 20995789 20995789 1 + C A rs74902521 20995778 + 20995758 20995798 41 GCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGG GCCACATCACTGACAGCTTGACACATGCCTCATAAGAGAGG < 41bp 1 0.559572129521773 1 0.163390308618546 experiment 0.880855740956453 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 FOCAD ENSG00000188352;ENSG00000188921 UTR3 Human other chr9:20995778 chr9:20995789 . . 0 hm6A_associated_SNPs_11050 0 0 1 1 20995786 20995812 mRNA hsa-miR-186 KIAA1797 miRanda miRanda
14034 chr9 21865441 21865441 1 + A G rs142136256 21865433 + 21865413 21865453 41 TTACAGCAGCATGAGAATGGACTAATACACTCCTCAAATGT TTACAGCAGCATGAGAATGGACTAATACGCTCCTCAAATGT < 41bp 1 0.716940292501335 1 0.914140164852142 experiment 0.56611941499733 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 MTAP ENSG00000099810 UTR3 Human protein_coding chr9:21865433 chr9:21865441 . . 0 hm6A_associated_SNPs_11057 0 0 1 1 21865425 21865446 mRNA hsa-miR-122 MTAP miRanda miRanda
14034 chr9 32418454 32418454 1 + C T rs139223145 32418447 + 32418427 32418467 41 GGATGGATATTATTACCCAGACAGCCTCGTGGGCACAGACT GGATGGATATTATTACCCAGACAGCCTTGTGGGCACAGACT < 41bp 1 0.570579190193566 1 0.0131259262561798 experiment 0.858841619612868 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 28 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32418447 chr9:32418454 synonymous SNV . 0 hm6A_associated_SNPs_11061 0 0 1 1 32418431 32418455 mRNA hsa-miR-485-5p ACO1 miRanda miRanda
14034 chr9 32425898 32425898 1 + T C rs34319839 32425903 + 32425883 32425923 41 TAAGACCTTTATCTATGATAACACTGAATTCACCCTTGCTC TAAGACCTTTATCTACGATAACACTGAATTCACCCTTGCTC < 41bp 1 0.745396374328766 1 0.106854259967804 experiment 0.509207251342467 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32425903 chr9:32425898 synonymous SNV . 0 hm6A_associated_SNPs_11062 0 0 0 2 32425881 32425901 mRNA hsa-miR-376a ACO1 miRanda miRanda
14034 chr9 32425898 32425898 1 + T C rs34319839 32425903 + 32425883 32425923 41 TAAGACCTTTATCTATGATAACACTGAATTCACCCTTGCTC TAAGACCTTTATCTACGATAACACTGAATTCACCCTTGCTC < 41bp 1 0.745396374328766 1 0.106854259967804 experiment 0.509207251342467 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32425903 chr9:32425898 synonymous SNV . 0 hm6A_associated_SNPs_11062 0 0 0 2 32425879 32425901 mRNA hsa-miR-376b ACO1 miRanda miRanda
14034 chr9 33039015 33039015 1 + A G rs11542818 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATGGTAGTGTTTTAAAAA < 41bp 1 0.387123913846097 1 0.985912919044495 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039015 . . 0 hm6A_associated_SNPs_11068 0 0 1 3 33039003 33039023 mRNA hsa-miR-101 DNAJA1 miRanda miRanda
14034 chr9 33039015 33039015 1 + A G rs11542818 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATGGTAGTGTTTTAAAAA < 41bp 1 0.387123913846097 1 0.985912919044495 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039015 . . 0 hm6A_associated_SNPs_11068 0 0 1 3 33039002 33039024 mRNA hsa-miR-141 DNAJA1 miRanda miRanda
14034 chr9 33039015 33039015 1 + A G rs11542818 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATGGTAGTGTTTTAAAAA < 41bp 1 0.387123913846097 1 0.985912919044495 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039015 . . 0 hm6A_associated_SNPs_11068 0 0 1 3 33039002 33039024 mRNA hsa-miR-200a DNAJA1 miRanda miRanda
14034 chr9 33039024 33039024 1 + T A rs7296 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTATAAAAA < 41bp 1 0.384498635714553 1 0.983119130134583 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039024 . . 0 hm6A_associated_SNPs_11069 0 0 1 5 33039022 33039043 mRNA hsa-miR-205 DNAJA1 miRanda miRanda
14034 chr9 33039024 33039024 1 + T A rs7296 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTATAAAAA < 41bp 1 0.384498635714553 1 0.983119130134583 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039024 . . 0 hm6A_associated_SNPs_11069 0 0 1 5 33039002 33039024 mRNA hsa-miR-141 DNAJA1 miRanda miRanda
14034 chr9 33039024 33039024 1 + T A rs7296 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTATAAAAA < 41bp 1 0.384498635714553 1 0.983119130134583 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039024 . . 0 hm6A_associated_SNPs_11069 0 0 1 5 33039018 33039042 mRNA hsa-miR-136 DNAJA1 miRanda miRanda
14034 chr9 33039024 33039024 1 + T A rs7296 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTATAAAAA < 41bp 1 0.384498635714553 1 0.983119130134583 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039024 . . 0 hm6A_associated_SNPs_11069 0 0 1 5 33039002 33039024 mRNA hsa-miR-200a DNAJA1 miRanda miRanda
14034 chr9 33039024 33039024 1 + T A rs7296 33039010 + 33038990 33039030 41 TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAA TCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTATAAAAA < 41bp 1 0.384498635714553 1 0.983119130134583 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 DNAJA1 ENSG00000086061 UTR3 Human protein_coding chr9:33039010 chr9:33039024 . . 0 hm6A_associated_SNPs_11069 0 0 1 5 33039023 33039044 mRNA hsa-miR-544 DNAJA1 miRanda miRanda
14034 chr9 33281101 33281101 1 + C G rs191658225 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGGTCGTATGACTTGTTTTCATTCATTAATA < 41bp 1 0.415723200726285 1 0.287411779165268 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 13 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281101 . . 0 hm6A_associated_SNPs_11070 0 0 1 5 33281094 33281119 mRNA hsa-miR-30a CHMP5 miRanda miRanda
14034 chr9 33281101 33281101 1 + C G rs191658225 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGGTCGTATGACTTGTTTTCATTCATTAATA < 41bp 1 0.415723200726285 1 0.287411779165268 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 13 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281101 . . 0 hm6A_associated_SNPs_11070 0 0 1 5 33281095 33281119 mRNA hsa-miR-30c CHMP5 miRanda miRanda
14034 chr9 33281101 33281101 1 + C G rs191658225 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGGTCGTATGACTTGTTTTCATTCATTAATA < 41bp 1 0.415723200726285 1 0.287411779165268 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 13 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281101 . . 0 hm6A_associated_SNPs_11070 0 0 1 5 33281093 33281113 mRNA hsa-miR-224 CHMP5 miRanda miRanda
14034 chr9 33281101 33281101 1 + C G rs191658225 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGGTCGTATGACTTGTTTTCATTCATTAATA < 41bp 1 0.415723200726285 1 0.287411779165268 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 13 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281101 . . 0 hm6A_associated_SNPs_11070 0 0 1 5 33281087 33281110 mRNA hsa-miR-376a CHMP5 miRanda miRanda
14034 chr9 33281101 33281101 1 + C G rs191658225 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGGTCGTATGACTTGTTTTCATTCATTAATA < 41bp 1 0.415723200726285 1 0.287411779165268 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 13 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281101 . . 0 hm6A_associated_SNPs_11070 0 0 1 5 33281086 33281110 mRNA hsa-miR-376b CHMP5 miRanda miRanda
14034 chr9 33281107 33281107 1 + T C rs568419590 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGCTCGTACGACTTGTTTTCATTCATTAATA Direct Loss 1 0.480189540546831 1 0.409408062696457 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281107 . . 0 hm6A_associated_SNPs_11071 0 0 1 5 33281094 33281119 mRNA hsa-miR-30a CHMP5 miRanda miRanda
14034 chr9 33281107 33281107 1 + T C rs568419590 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGCTCGTACGACTTGTTTTCATTCATTAATA Direct Loss 1 0.480189540546831 1 0.409408062696457 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281107 . . 0 hm6A_associated_SNPs_11071 0 0 1 5 33281095 33281119 mRNA hsa-miR-30c CHMP5 miRanda miRanda
14034 chr9 33281107 33281107 1 + T C rs568419590 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGCTCGTACGACTTGTTTTCATTCATTAATA Direct Loss 1 0.480189540546831 1 0.409408062696457 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281107 . . 0 hm6A_associated_SNPs_11071 0 0 1 5 33281093 33281113 mRNA hsa-miR-224 CHMP5 miRanda miRanda
14034 chr9 33281107 33281107 1 + T C rs568419590 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGCTCGTACGACTTGTTTTCATTCATTAATA Direct Loss 1 0.480189540546831 1 0.409408062696457 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281107 . . 0 hm6A_associated_SNPs_11071 0 0 1 5 33281087 33281110 mRNA hsa-miR-376a CHMP5 miRanda miRanda
14034 chr9 33281107 33281107 1 + T C rs568419590 33281109 + 33281089 33281129 41 AAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATA AAGTATTTTTAGCTCGTACGACTTGTTTTCATTCATTAATA Direct Loss 1 0.480189540546831 1 0.409408062696457 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 CHMP5 ENSG00000086065 UTR3 Human protein_coding chr9:33281109 chr9:33281107 . . 0 hm6A_associated_SNPs_11071 0 0 1 5 33281086 33281110 mRNA hsa-miR-376b CHMP5 miRanda miRanda
14034 chr9 33370391 33370391 1 + C T rs188105222 33370385 + 33370365 33370405 41 ATGCCTGAAACATCAGACAGACATTGCTTGCTTTACCCAAA ATGCCTGAAACATCAGACAGACATTGTTTGCTTTACCCAAA < 41bp 1 0.581763885147683 1 0.046505868434906 experiment 0.836472229704635 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 NFX1 ENSG00000086102 UTR3 Human protein_coding chr9:33370385 chr9:33370391 . . 0 hm6A_associated_SNPs_11077 0 0 1 2 33370391 33370412 mRNA hsa-miR-383 NFX1 miRanda miRanda
14034 chr9 33370391 33370391 1 + C T rs188105222 33370385 + 33370365 33370405 41 ATGCCTGAAACATCAGACAGACATTGCTTGCTTTACCCAAA ATGCCTGAAACATCAGACAGACATTGTTTGCTTTACCCAAA < 41bp 1 0.581763885147683 1 0.046505868434906 experiment 0.836472229704635 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 NFX1 ENSG00000086102 UTR3 Human protein_coding chr9:33370385 chr9:33370391 . . 0 hm6A_associated_SNPs_11077 0 0 1 2 33370375 33370397 mRNA hsa-miR-424 NFX1 miRanda miRanda
14034 chr9 33371081 33371081 1 + C T rs73645270 33371098 + 33371078 33371118 41 CCCCAGAGCAGTAGCAGGAGACTTGAGAAGTAGAGTGACAA CCCTAGAGCAGTAGCAGGAGACTTGAGAAGTAGAGTGACAA < 41bp 1 0.157353483253784 1 0.0312323570251465 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 NFX1 ENSG00000086102 UTR3 Human protein_coding chr9:33371098 chr9:33371081 . . 0 hm6A_associated_SNPs_11078 0 0 1 1 33371074 33371096 mRNA hsa-miR-486-5p NFX1 miRanda miRanda
14034 chr9 33919476 33919476 1 + C G rs191054433 33919483 + 33919463 33919503 41 GCCCTATTGGCCTCTGTTAGACATTGACTCAGGGAGCCGGA GCCCTATTGGCCTGTGTTAGACATTGACTCAGGGAGCCGGA < 41bp 1 0.46501356357543 1 0.742438137531281 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 UBE2R2 ENSG00000107341 UTR3 Human protein_coding chr9:33919483 chr9:33919476 . . 0 hm6A_associated_SNPs_11087 0 0 1 3 33919476 33919497 mRNA hsa-miR-125b UBE2R2 miRanda miRanda
14034 chr9 33919476 33919476 1 + C G rs191054433 33919483 + 33919463 33919503 41 GCCCTATTGGCCTCTGTTAGACATTGACTCAGGGAGCCGGA GCCCTATTGGCCTGTGTTAGACATTGACTCAGGGAGCCGGA < 41bp 1 0.46501356357543 1 0.742438137531281 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 UBE2R2 ENSG00000107341 UTR3 Human protein_coding chr9:33919483 chr9:33919476 . . 0 hm6A_associated_SNPs_11087 0 0 1 3 33919472 33919497 mRNA hsa-miR-125a-5p UBE2R2 miRanda miRanda
14034 chr9 33919476 33919476 1 + C G rs191054433 33919483 + 33919463 33919503 41 GCCCTATTGGCCTCTGTTAGACATTGACTCAGGGAGCCGGA GCCCTATTGGCCTGTGTTAGACATTGACTCAGGGAGCCGGA < 41bp 1 0.46501356357543 1 0.742438137531281 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 UBE2R2 ENSG00000107341 UTR3 Human protein_coding chr9:33919483 chr9:33919476 . . 0 hm6A_associated_SNPs_11087 0 0 1 3 33919461 33919484 mRNA hsa-miR-421 UBE2R2 miRanda miRanda
14034 chr9 34997671 34997671 1 + A G rs147075313 34997678 + 34997658 34997698 41 GGTGGAAAAGACTAGAAAGGACATTGCTTTCTCAGCCCCAC GGTGGAAAAGACTGGAAAGGACATTGCTTTCTCAGCCCCAC < 41bp 1 0.653617098147391 1 0.759875535964966 experiment 0.692765803705219 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 DNAJB5 ENSG00000137094 UTR3 Human protein_coding chr9:34997678 chr9:34997671 . . 0 hm6A_associated_SNPs_11093 0 0 0 1 34997667 34997688 mRNA hsa-miR-186 DNAJB5 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609965 + 35609945 35609985 41 CAGCATTGCTGACACATGAGACTAACACGTGCAATTATTTA CAGCATTGCTGACACATGAGACTAACATGTGCAATTATTTA < 41bp 1 0.613056900721502 1 0.961270868778229 experiment 0.773886198556996 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609965 chr9:35609972 . . 0 hm6A_associated_SNPs_11102 0 0 0 7 35609961 35609980 mRNA hsa-miR-25 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609965 + 35609945 35609985 41 CAGCATTGCTGACACATGAGACTAACACGTGCAATTATTTA CAGCATTGCTGACACATGAGACTAACATGTGCAATTATTTA < 41bp 1 0.613056900721502 1 0.961270868778229 experiment 0.773886198556996 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609965 chr9:35609972 . . 0 hm6A_associated_SNPs_11102 0 0 0 7 35609961 35609980 mRNA hsa-miR-32 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609965 + 35609945 35609985 41 CAGCATTGCTGACACATGAGACTAACACGTGCAATTATTTA CAGCATTGCTGACACATGAGACTAACATGTGCAATTATTTA < 41bp 1 0.613056900721502 1 0.961270868778229 experiment 0.773886198556996 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609965 chr9:35609972 . . 0 hm6A_associated_SNPs_11102 0 0 0 7 35609959 35609980 mRNA hsa-miR-92a TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609965 + 35609945 35609985 41 CAGCATTGCTGACACATGAGACTAACACGTGCAATTATTTA CAGCATTGCTGACACATGAGACTAACATGTGCAATTATTTA < 41bp 1 0.613056900721502 1 0.961270868778229 experiment 0.773886198556996 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609965 chr9:35609972 . . 0 hm6A_associated_SNPs_11102 0 0 0 7 35609963 35609985 mRNA hsa-miR-186 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609965 + 35609945 35609985 41 CAGCATTGCTGACACATGAGACTAACACGTGCAATTATTTA CAGCATTGCTGACACATGAGACTAACATGTGCAATTATTTA < 41bp 1 0.613056900721502 1 0.961270868778229 experiment 0.773886198556996 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609965 chr9:35609972 . . 0 hm6A_associated_SNPs_11102 0 0 0 7 35609955 35609980 mRNA hsa-miR-363 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609965 + 35609945 35609985 41 CAGCATTGCTGACACATGAGACTAACACGTGCAATTATTTA CAGCATTGCTGACACATGAGACTAACATGTGCAATTATTTA < 41bp 1 0.613056900721502 1 0.961270868778229 experiment 0.773886198556996 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609965 chr9:35609972 . . 0 hm6A_associated_SNPs_11102 0 0 0 7 35609957 35609980 mRNA hsa-miR-367 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609965 + 35609945 35609985 41 CAGCATTGCTGACACATGAGACTAACACGTGCAATTATTTA CAGCATTGCTGACACATGAGACTAACATGTGCAATTATTTA < 41bp 1 0.613056900721502 1 0.961270868778229 experiment 0.773886198556996 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609965 chr9:35609972 . . 0 hm6A_associated_SNPs_11102 0 0 0 7 35609959 35609980 mRNA hsa-miR-92b TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609969 + 35609949 35609989 41 ATTGCTGACACATGAGACTAACACGTGCAATTATTTAAAAA ATTGCTGACACATGAGACTAACATGTGCAATTATTTAAAAA < 41bp 1 0.585264102946569 1 0.931925892829895 experiment 0.829471794106861 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609969 chr9:35609972 . . 0 hm6A_associated_SNPs_11103 0 0 0 7 35609961 35609980 mRNA hsa-miR-25 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609969 + 35609949 35609989 41 ATTGCTGACACATGAGACTAACACGTGCAATTATTTAAAAA ATTGCTGACACATGAGACTAACATGTGCAATTATTTAAAAA < 41bp 1 0.585264102946569 1 0.931925892829895 experiment 0.829471794106861 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609969 chr9:35609972 . . 0 hm6A_associated_SNPs_11103 0 0 0 7 35609961 35609980 mRNA hsa-miR-32 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609969 + 35609949 35609989 41 ATTGCTGACACATGAGACTAACACGTGCAATTATTTAAAAA ATTGCTGACACATGAGACTAACATGTGCAATTATTTAAAAA < 41bp 1 0.585264102946569 1 0.931925892829895 experiment 0.829471794106861 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609969 chr9:35609972 . . 0 hm6A_associated_SNPs_11103 0 0 0 7 35609959 35609980 mRNA hsa-miR-92a TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609969 + 35609949 35609989 41 ATTGCTGACACATGAGACTAACACGTGCAATTATTTAAAAA ATTGCTGACACATGAGACTAACATGTGCAATTATTTAAAAA < 41bp 1 0.585264102946569 1 0.931925892829895 experiment 0.829471794106861 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609969 chr9:35609972 . . 0 hm6A_associated_SNPs_11103 0 0 0 7 35609963 35609985 mRNA hsa-miR-186 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609969 + 35609949 35609989 41 ATTGCTGACACATGAGACTAACACGTGCAATTATTTAAAAA ATTGCTGACACATGAGACTAACATGTGCAATTATTTAAAAA < 41bp 1 0.585264102946569 1 0.931925892829895 experiment 0.829471794106861 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609969 chr9:35609972 . . 0 hm6A_associated_SNPs_11103 0 0 0 7 35609955 35609980 mRNA hsa-miR-363 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609969 + 35609949 35609989 41 ATTGCTGACACATGAGACTAACACGTGCAATTATTTAAAAA ATTGCTGACACATGAGACTAACATGTGCAATTATTTAAAAA < 41bp 1 0.585264102946569 1 0.931925892829895 experiment 0.829471794106861 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609969 chr9:35609972 . . 0 hm6A_associated_SNPs_11103 0 0 0 7 35609957 35609980 mRNA hsa-miR-367 TESK1 miRanda miRanda
14034 chr9 35609972 35609972 1 + C T rs374955583 35609969 + 35609949 35609989 41 ATTGCTGACACATGAGACTAACACGTGCAATTATTTAAAAA ATTGCTGACACATGAGACTAACATGTGCAATTATTTAAAAA < 41bp 1 0.585264102946569 1 0.931925892829895 experiment 0.829471794106861 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 TESK1 ENSG00000107140;ENSG00000137101 UTR3 Human other chr9:35609969 chr9:35609972 . . 0 hm6A_associated_SNPs_11103 0 0 0 7 35609959 35609980 mRNA hsa-miR-92b TESK1 miRanda miRanda
14034 chr9 35661057 35661057 1 + C G rs10441685 35661045 + 35661025 35661065 41 CTGGAGCACAGAGACATGGAACCTAGCTACTTCCTGGGAGG CTGGAGCACAGAGACATGGAACCTAGCTACTTGCTGGGAGG < 41bp 1 0.782374362567377 1 0.971145510673523 experiment 0.435251274865247 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661045 chr9:35661057 nonsynonymous SNV 0.208 2 hm6A_associated_SNPs_11105 0 0 1 4 35661030 35661057 mRNA hsa-miR-302a CCDC107 miRanda miRanda
14034 chr9 35661057 35661057 1 + C G rs10441685 35661045 + 35661025 35661065 41 CTGGAGCACAGAGACATGGAACCTAGCTACTTCCTGGGAGG CTGGAGCACAGAGACATGGAACCTAGCTACTTGCTGGGAGG < 41bp 1 0.782374362567377 1 0.971145510673523 experiment 0.435251274865247 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661045 chr9:35661057 nonsynonymous SNV 0.208 2 hm6A_associated_SNPs_11105 0 0 1 4 35661030 35661057 mRNA hsa-miR-302b CCDC107 miRanda miRanda
14034 chr9 35661057 35661057 1 + C G rs10441685 35661045 + 35661025 35661065 41 CTGGAGCACAGAGACATGGAACCTAGCTACTTCCTGGGAGG CTGGAGCACAGAGACATGGAACCTAGCTACTTGCTGGGAGG < 41bp 1 0.782374362567377 1 0.971145510673523 experiment 0.435251274865247 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661045 chr9:35661057 nonsynonymous SNV 0.208 2 hm6A_associated_SNPs_11105 0 0 1 4 35661030 35661057 mRNA hsa-miR-302c CCDC107 miRanda miRanda
14034 chr9 35661057 35661057 1 + C G rs10441685 35661045 + 35661025 35661065 41 CTGGAGCACAGAGACATGGAACCTAGCTACTTCCTGGGAGG CTGGAGCACAGAGACATGGAACCTAGCTACTTGCTGGGAGG < 41bp 1 0.782374362567377 1 0.971145510673523 experiment 0.435251274865247 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661045 chr9:35661057 nonsynonymous SNV 0.208 2 hm6A_associated_SNPs_11105 0 0 1 4 35661030 35661057 mRNA hsa-miR-302d CCDC107 miRanda miRanda
14034 chr9 36211875 36211875 1 + C G rs3628 36211868 + 36211848 36211888 41 ATTATGTTGAGTTCTTTTGGACCAAACCTTTTTGTCTTTAG ATTATGTTGAGTTCTTTTGGACCAAACGTTTTTGTCTTTAG < 41bp 1 0.638965598217104 1 0.74782133102417 experiment 0.722068803565793 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 CLTA ENSG00000122705 UTR3 Human protein_coding chr9:36211868 chr9:36211875 . . 0 hm6A_associated_SNPs_11109 0 0 1 1 36211853 36211875 mRNA hsa-miR-9 CLTA miRanda miRanda
14034 chr9 37086686 37086686 1 + A G rs116171197 37086690 + 37086670 37086710 41 GGCATAGGAACCAATCAGAAACAATCGCTTCAGCAATCAAG GGCATAGGAACCAATCGGAAACAATCGCTTCAGCAATCAAG < 41bp 1 0.684758483809214 1 0.779673218727112 experiment 0.630483032381572 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37086690 chr9:37086686 . . 0 hm6A_associated_SNPs_11111 0 0 1 1 37086665 37086686 lncRNA hsa-miR-509-3p EBLN3P miRanda starBase2
14034 chr9 37086865 37086865 1 + T C rs184809208 37086862 + 37086842 37086882 41 AGGCACTGGGGAAGTGGAGGACATAGAACAGCTCAATCAGT AGGCACTGGGGAAGTGGAGGACACAGAACAGCTCAATCAGT < 41bp 1 0.677649671558884 1 0.976015567779541 experiment 0.644700656882232 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37086862 chr9:37086865 . . 0 hm6A_associated_SNPs_11112 0 0 1 2 37086865 37086886 lncRNA hsa-miR-141-3p EBLN3P miRanda starBase2
14034 chr9 37086865 37086865 1 + T C rs184809208 37086862 + 37086842 37086882 41 AGGCACTGGGGAAGTGGAGGACATAGAACAGCTCAATCAGT AGGCACTGGGGAAGTGGAGGACACAGAACAGCTCAATCAGT < 41bp 1 0.677649671558884 1 0.976015567779541 experiment 0.644700656882232 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37086862 chr9:37086865 . . 0 hm6A_associated_SNPs_11112 0 0 1 2 37086865 37086886 lncRNA hsa-miR-200a-3p EBLN3P miRanda starBase2
14034 chr9 37086865 37086865 1 + T C rs184809208 37086869 + 37086849 37086889 41 GGGGAAGTGGAGGACATAGAACAGCTCAATCAGTGTTTGAT GGGGAAGTGGAGGACACAGAACAGCTCAATCAGTGTTTGAT < 41bp 1 0.540368777340761 1 0.985684514045715 experiment 0.919262445318478 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37086869 chr9:37086865 . . 0 hm6A_associated_SNPs_11113 0 0 1 2 37086865 37086886 lncRNA hsa-miR-141-3p EBLN3P miRanda starBase2
14034 chr9 37086865 37086865 1 + T C rs184809208 37086869 + 37086849 37086889 41 GGGGAAGTGGAGGACATAGAACAGCTCAATCAGTGTTTGAT GGGGAAGTGGAGGACACAGAACAGCTCAATCAGTGTTTGAT < 41bp 1 0.540368777340761 1 0.985684514045715 experiment 0.919262445318478 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37086869 chr9:37086865 . . 0 hm6A_associated_SNPs_11113 0 0 1 2 37086865 37086886 lncRNA hsa-miR-200a-3p EBLN3P miRanda starBase2
14034 chr9 37087160 37087160 1 + C T rs10973199 37087148 + 37087128 37087168 41 ATAGTAGTAGGGGTCAAGTGACAGAATCCGTGCCAGCAGTC ATAGTAGTAGGGGTCAAGTGACAGAATCCGTGTCAGCAGTC < 41bp 1 0.663668808727275 1 0.756608307361603 experiment 0.67266238254545 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 33 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37087148 chr9:37087160 . . 0 hm6A_associated_SNPs_11116 0 0 1 2 37087157 37087177 lncRNA hsa-miR-490-3p EBLN3P miRanda starBase2
14034 chr9 37087160 37087160 1 + C T rs10973199 37087148 + 37087128 37087168 41 ATAGTAGTAGGGGTCAAGTGACAGAATCCGTGCCAGCAGTC ATAGTAGTAGGGGTCAAGTGACAGAATCCGTGTCAGCAGTC < 41bp 1 0.663668808727275 1 0.756608307361603 experiment 0.67266238254545 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 33 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37087148 chr9:37087160 . . 0 hm6A_associated_SNPs_11116 0 0 1 2 37087150 37087171 lncRNA hsa-miR-873-3p EBLN3P miRanda starBase2
14034 chr9 37087560 37087560 1 + C T rs573159250 37087572 + 37087552 37087592 41 TATCACCCCGTTATGGTTGAACTTTCTCCTTCAAAATTACC TATCACCCTGTTATGGTTGAACTTTCTCCTTCAAAATTACC < 41bp 1 0.75918947342168 1 0.838401734828949 experiment 0.48162105315664 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 9 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37087572 chr9:37087560 . . 0 hm6A_associated_SNPs_11117 0 0 1 1 37087559 37087583 lncRNA hsa-miR-4428 EBLN3P miRanda starBase2
14034 chr9 37087561 37087561 1 + G A rs73442621 37087572 + 37087552 37087592 41 TATCACCCCGTTATGGTTGAACTTTCTCCTTCAAAATTACC TATCACCCCATTATGGTTGAACTTTCTCCTTCAAAATTACC < 41bp 1 0.780404994396752 1 0.867013216018677 experiment 0.439190011206496 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37087572 chr9:37087561 . . 0 hm6A_associated_SNPs_11118 0 0 1 1 37087559 37087583 lncRNA hsa-miR-4428 EBLN3P miRanda starBase2
14034 chr9 37087622 37087622 1 + C T rs76602835 37087639 + 37087619 37087659 41 GGGCTAAAAGACTTAATCAGACATATTCTGGGTTCAAGGCT GGGTTAAAAGACTTAATCAGACATATTCTGGGTTCAAGGCT < 41bp 1 0.685344274470123 1 0.762738645076752 experiment 0.629311451059755 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37087639 chr9:37087622 . . 0 hm6A_associated_SNPs_11119 0 0 1 1 37087622 37087643 lncRNA hsa-miR-654-3p EBLN3P miRanda starBase2
14034 chr9 37087641 37087641 1 + A G rs116700642 37087639 + 37087619 37087659 41 GGGCTAAAAGACTTAATCAGACATATTCTGGGTTCAAGGCT GGGCTAAAAGACTTAATCAGACGTATTCTGGGTTCAAGGCT Direct Loss 1 0.621546249203509 1 0.841553330421448 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37087639 chr9:37087641 . . 0 hm6A_associated_SNPs_11120 0 0 1 1 37087622 37087643 lncRNA hsa-miR-654-3p EBLN3P miRanda starBase2
14034 chr9 37088182 37088182 1 + G C rs73442624 37088200 + 37088180 37088220 41 GGGTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT GGCTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT < 41bp 1 0.56143740624767 1 0.048163115978241 experiment 0.877125187504661 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37088200 chr9:37088182 . . 0 hm6A_associated_SNPs_11122 0 0 1 4 37088175 37088196 lncRNA hsa-miR-1278 EBLN3P miRanda starBase2
14034 chr9 37088182 37088182 1 + G C rs73442624 37088200 + 37088180 37088220 41 GGGTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT GGCTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT < 41bp 1 0.56143740624767 1 0.048163115978241 experiment 0.877125187504661 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37088200 chr9:37088182 . . 0 hm6A_associated_SNPs_11122 0 0 1 4 37088182 37088201 lncRNA hsa-miR-2355-5p EBLN3P miRanda starBase2
14034 chr9 37088182 37088182 1 + G C rs73442624 37088200 + 37088180 37088220 41 GGGTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT GGCTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT < 41bp 1 0.56143740624767 1 0.048163115978241 experiment 0.877125187504661 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37088200 chr9:37088182 . . 0 hm6A_associated_SNPs_11122 0 0 1 4 37088177 37088198 lncRNA hsa-miR-4712-5p EBLN3P miRanda starBase2
14034 chr9 37088182 37088182 1 + G C rs73442624 37088200 + 37088180 37088220 41 GGGTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT GGCTGTAAGCAGTACTGGGGACTTACAGTGATAAAAGACAT < 41bp 1 0.56143740624767 1 0.048163115978241 experiment 0.877125187504661 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37088200 chr9:37088182 . . 0 hm6A_associated_SNPs_11122 0 0 1 4 37088176 37088198 lncRNA hsa-miR-770-5p EBLN3P miRanda starBase2
14034 chr9 37357965 37357965 1 + C T rs59347416 37357980 + 37357960 37358000 41 TACAGCGGTGTTTCAAGCGGACTGTCACTCAGATCTGCAGA TACAGTGGTGTTTCAAGCGGACTGTCACTCAGATCTGCAGA < 41bp 1 0.680274672579745 1 0.7069993019104 experiment 0.639450654840511 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 ZCCHC7 ENSG00000147905 UTR3 Human protein_coding chr9:37357980 chr9:37357965 . . 0 hm6A_associated_SNPs_11125 0 0 1 1 37357946 37357969 mRNA hsa-miR-10b ZCCHC7 miRanda miRanda
14034 chr9 72967968 72967968 1 + G A rs73647489 72967962 + 72967942 72967982 41 ACTGAGAATAAAATTAGGTGACAAGGGTTTTTAAAGAATAA ACTGAGAATAAAATTAGGTGACAAGGATTTTTAAAGAATAA < 41bp 1 0.536593698534513 1 0.691518068313599 experiment 0.926812602930973 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 SMC5 ENSG00000198887 UTR3 Human protein_coding chr9:72967962 chr9:72967968 . . 0 hm6A_associated_SNPs_11161 0 0 1 3 72967949 72967970 mRNA hsa-miR-10a SMC5 miRanda miRanda
14034 chr9 72967968 72967968 1 + G A rs73647489 72967962 + 72967942 72967982 41 ACTGAGAATAAAATTAGGTGACAAGGGTTTTTAAAGAATAA ACTGAGAATAAAATTAGGTGACAAGGATTTTTAAAGAATAA < 41bp 1 0.536593698534513 1 0.691518068313599 experiment 0.926812602930973 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 SMC5 ENSG00000198887 UTR3 Human protein_coding chr9:72967962 chr9:72967968 . . 0 hm6A_associated_SNPs_11161 0 0 1 3 72967949 72967970 mRNA hsa-miR-10b SMC5 miRanda miRanda
14034 chr9 72967968 72967968 1 + G A rs73647489 72967962 + 72967942 72967982 41 ACTGAGAATAAAATTAGGTGACAAGGGTTTTTAAAGAATAA ACTGAGAATAAAATTAGGTGACAAGGATTTTTAAAGAATAA < 41bp 1 0.536593698534513 1 0.691518068313599 experiment 0.926812602930973 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 SMC5 ENSG00000198887 UTR3 Human protein_coding chr9:72967962 chr9:72967968 . . 0 hm6A_associated_SNPs_11161 0 0 1 3 72967965 72967986 mRNA hsa-miR-154 SMC5 miRanda miRanda
14034 chr9 72968562 72968562 1 + G A rs141667484 72968542 + 72968522 72968562 41 CATTGAAATTTATATTCTTAACTAGGTCAAAAAATAATGAG CATTGAAATTTATATTCTTAACTAGGTCAAAAAATAATGAA < 41bp 1 0.0873794108522184 1 0.366034507751465 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SMC5 ENSG00000198887 UTR3 Human protein_coding chr9:72968542 chr9:72968562 . . 0 hm6A_associated_SNPs_11162 0 0 1 3 72968544 72968565 mRNA hsa-miR-24 SMC5 miRanda miRanda
14034 chr9 72968562 72968562 1 + G A rs141667484 72968542 + 72968522 72968562 41 CATTGAAATTTATATTCTTAACTAGGTCAAAAAATAATGAG CATTGAAATTTATATTCTTAACTAGGTCAAAAAATAATGAA < 41bp 1 0.0873794108522184 1 0.366034507751465 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SMC5 ENSG00000198887 UTR3 Human protein_coding chr9:72968542 chr9:72968562 . . 0 hm6A_associated_SNPs_11162 0 0 1 3 72968545 72968567 mRNA hsa-miR-135a SMC5 miRanda miRanda
14034 chr9 72968562 72968562 1 + G A rs141667484 72968542 + 72968522 72968562 41 CATTGAAATTTATATTCTTAACTAGGTCAAAAAATAATGAG CATTGAAATTTATATTCTTAACTAGGTCAAAAAATAATGAA < 41bp 1 0.0873794108522184 1 0.366034507751465 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SMC5 ENSG00000198887 UTR3 Human protein_coding chr9:72968542 chr9:72968562 . . 0 hm6A_associated_SNPs_11162 0 0 1 3 72968545 72968567 mRNA hsa-miR-135b SMC5 miRanda miRanda
14034 chr9 72968904 72968904 1 + G A rs150510501 72968900 + 72968880 72968920 41 TGAGTATCAATGTGAAAAAGACACGTGAAGATTAAGCATGT TGAGTATCAATGTGAAAAAGACACATGAAGATTAAGCATGT < 41bp 1 0.171949304844957 1 0.103832423686981 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 SMC5 ENSG00000198887 UTR3 Human protein_coding chr9:72968900 chr9:72968904 . . 0 hm6A_associated_SNPs_11163 0 0 1 1 72968885 72968905 mRNA hsa-miR-187 SMC5 miRanda miRanda
14034 chr9 74588247 74588247 1 + C G rs17057320 74588239 + 74588219 74588259 41 ATTACTTAACATCAAACTAAACAAGATTCAGAATTGATGGT ATTACTTAACATCAAACTAAACAAGATTGAGAATTGATGGT < 41bp 1 0.0875764470976524 1 0.277281641960144 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 C9orf85 ENSG00000155621 UTR3 Human protein_coding chr9:74588239 chr9:74588247 . . 0 hm6A_associated_SNPs_11166 0 0 1 2 74588244 74588265 mRNA hsa-miR-381 C9orf85 miRanda miRanda
14034 chr9 74588247 74588247 1 + C G rs17057320 74588239 + 74588219 74588259 41 ATTACTTAACATCAAACTAAACAAGATTCAGAATTGATGGT ATTACTTAACATCAAACTAAACAAGATTGAGAATTGATGGT < 41bp 1 0.0875764470976524 1 0.277281641960144 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 C9orf85 ENSG00000155621 UTR3 Human protein_coding chr9:74588239 chr9:74588247 . . 0 hm6A_associated_SNPs_11166 0 0 1 2 74588244 74588265 mRNA hsa-miR-300 C9orf85 miRanda miRanda
14034 chr9 80885780 80885780 1 + A T rs112280309 80885772 + 80885752 80885792 41 TCTAGAATCCCATTGAAATGACTGGAGAAATATTAAAATAA TCTAGAATCCCATTGAAATGACTGGAGATATATTAAAATAA < 41bp 1 0.443049104417362 1 0.891632676124573 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 CEP78 ENSG00000148019 UTR3 Human protein_coding chr9:80885772 chr9:80885780 . . 0 hm6A_associated_SNPs_11178 0 0 0 1 80885773 80885792 mRNA hsa-miR-590-3p CEP78 miRanda miRanda
14034 chr9 80886091 80886091 1 + C A rs180701282 80886079 + 80886059 80886099 41 TGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAA TGATCTCTCTAACTATGATGACCTGCCACTTCAGTTTATAA < 41bp 1 0.151021052188008 1 0.897037267684937 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 CEP78 ENSG00000148019 UTR3 Human protein_coding chr9:80886079 chr9:80886091 . . 0 hm6A_associated_SNPs_11180 0 0 0 1 80886073 80886095 mRNA hsa-miR-191 CEP78 miRanda miRanda
14034 chr9 80944253 80944253 1 + C T rs76966550 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGTGTATTTTGC < 41bp 1 0.562604288219731 1 0.809384822845459 experiment 0.874791423560539 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944253 . . 0 hm6A_associated_SNPs_11191 0 0 1 6 80944252 80944273 mRNA hsa-miR-15a PSAT1 miRanda miRanda
14034 chr9 80944253 80944253 1 + C T rs76966550 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGTGTATTTTGC < 41bp 1 0.562604288219731 1 0.809384822845459 experiment 0.874791423560539 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944253 . . 0 hm6A_associated_SNPs_11191 0 0 1 6 80944248 80944273 mRNA hsa-miR-16 PSAT1 miRanda miRanda
14034 chr9 80944253 80944253 1 + C T rs76966550 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGTGTATTTTGC < 41bp 1 0.562604288219731 1 0.809384822845459 experiment 0.874791423560539 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944253 . . 0 hm6A_associated_SNPs_11191 0 0 1 6 80944251 80944273 mRNA hsa-miR-15b PSAT1 miRanda miRanda
14034 chr9 80944253 80944253 1 + C T rs76966550 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGTGTATTTTGC < 41bp 1 0.562604288219731 1 0.809384822845459 experiment 0.874791423560539 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944253 . . 0 hm6A_associated_SNPs_11191 0 0 1 6 80944250 80944273 mRNA hsa-miR-195 PSAT1 miRanda miRanda
14034 chr9 80944253 80944253 1 + C T rs76966550 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGTGTATTTTGC < 41bp 1 0.562604288219731 1 0.809384822845459 experiment 0.874791423560539 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944253 . . 0 hm6A_associated_SNPs_11191 0 0 1 6 80944252 80944273 mRNA hsa-miR-424 PSAT1 miRanda miRanda
14034 chr9 80944253 80944253 1 + C T rs76966550 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGTGTATTTTGC < 41bp 1 0.562604288219731 1 0.809384822845459 experiment 0.874791423560539 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944253 . . 0 hm6A_associated_SNPs_11191 0 0 1 6 80944253 80944273 mRNA hsa-miR-497 PSAT1 miRanda miRanda
14034 chr9 80944254 80944254 1 + G A rs17064358 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGCATATTTTGC < 41bp 1 0.555060637160332 1 0.815731406211853 experiment 0.889878725679336 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944254 . . 0 hm6A_associated_SNPs_11192 0 0 1 6 80944252 80944273 mRNA hsa-miR-15a PSAT1 miRanda miRanda
14034 chr9 80944254 80944254 1 + G A rs17064358 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGCATATTTTGC < 41bp 1 0.555060637160332 1 0.815731406211853 experiment 0.889878725679336 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944254 . . 0 hm6A_associated_SNPs_11192 0 0 1 6 80944248 80944273 mRNA hsa-miR-16 PSAT1 miRanda miRanda
14034 chr9 80944254 80944254 1 + G A rs17064358 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGCATATTTTGC < 41bp 1 0.555060637160332 1 0.815731406211853 experiment 0.889878725679336 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944254 . . 0 hm6A_associated_SNPs_11192 0 0 1 6 80944251 80944273 mRNA hsa-miR-15b PSAT1 miRanda miRanda
14034 chr9 80944254 80944254 1 + G A rs17064358 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGCATATTTTGC < 41bp 1 0.555060637160332 1 0.815731406211853 experiment 0.889878725679336 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944254 . . 0 hm6A_associated_SNPs_11192 0 0 1 6 80944250 80944273 mRNA hsa-miR-195 PSAT1 miRanda miRanda
14034 chr9 80944254 80944254 1 + G A rs17064358 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGCATATTTTGC < 41bp 1 0.555060637160332 1 0.815731406211853 experiment 0.889878725679336 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944254 . . 0 hm6A_associated_SNPs_11192 0 0 1 6 80944252 80944273 mRNA hsa-miR-424 PSAT1 miRanda miRanda
14034 chr9 80944254 80944254 1 + G A rs17064358 80944242 + 80944222 80944262 41 GAAATCTTGTTGCTTTTCTAACAAATTCCCGCGTATTTTGC GAAATCTTGTTGCTTTTCTAACAAATTCCCGCATATTTTGC < 41bp 1 0.555060637160332 1 0.815731406211853 experiment 0.889878725679336 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 33 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944242 chr9:80944254 . . 0 hm6A_associated_SNPs_11192 0 0 1 6 80944253 80944273 mRNA hsa-miR-497 PSAT1 miRanda miRanda
14034 chr9 80944838 80944838 1 + A G rs41277905 80944843 + 80944823 80944863 41 TTTTTCAATTATGCCATTAAACTAAACATTTCTGTTAAATT TTTTTCAATTATGCCGTTAAACTAAACATTTCTGTTAAATT < 41bp 1 0.124161672026763 1 0.311218231916428 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944843 chr9:80944838 . . 0 hm6A_associated_SNPs_11193 1 0 1 2 80944819 80944840 mRNA hsa-miR-183 PSAT1 miRanda miRanda
14034 chr9 80944838 80944838 1 + A G rs41277905 80944843 + 80944823 80944863 41 TTTTTCAATTATGCCATTAAACTAAACATTTCTGTTAAATT TTTTTCAATTATGCCGTTAAACTAAACATTTCTGTTAAATT < 41bp 1 0.124161672026763 1 0.311218231916428 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944843 chr9:80944838 . . 0 hm6A_associated_SNPs_11193 1 0 1 2 80944835 80944856 mRNA hsa-miR-203 PSAT1 miRanda miRanda
14034 chr9 80944838 80944838 1 + A G rs41277905 80944848 + 80944828 80944868 41 CAATTATGCCATTAAACTAAACATTTCTGTTAAATTACCCT CAATTATGCCGTTAAACTAAACATTTCTGTTAAATTACCCT < 41bp 1 0.277943362781703 1 0.431917130947113 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944848 chr9:80944838 . . 0 hm6A_associated_SNPs_11194 1 0 1 2 80944819 80944840 mRNA hsa-miR-183 PSAT1 miRanda miRanda
14034 chr9 80944838 80944838 1 + A G rs41277905 80944848 + 80944828 80944868 41 CAATTATGCCATTAAACTAAACATTTCTGTTAAATTACCCT CAATTATGCCGTTAAACTAAACATTTCTGTTAAATTACCCT < 41bp 1 0.277943362781703 1 0.431917130947113 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944848 chr9:80944838 . . 0 hm6A_associated_SNPs_11194 1 0 1 2 80944835 80944856 mRNA hsa-miR-203 PSAT1 miRanda miRanda
14034 chr9 80944867 80944867 1 + C G rs529821810 80944848 + 80944828 80944868 41 CAATTATGCCATTAAACTAAACATTTCTGTTAAATTACCCT CAATTATGCCATTAAACTAAACATTTCTGTTAAATTACCGT < 41bp 1 0.274483553475161 1 0.462874412536621 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 40 PSAT1 ENSG00000135069 UTR3 Human protein_coding chr9:80944848 chr9:80944867 . . 0 hm6A_associated_SNPs_11195 1 0 1 1 80944866 80944886 mRNA hsa-miR-411 PSAT1 miRanda miRanda
14034 chr9 82340765 82340765 1 + G A rs11545434 82340761 + 82340741 82340781 41 GGACTTTTTTTCTTTTTTTGACTCGTTGACAAGTGTCTTTG GGACTTTTTTTCTTTTTTTGACTCATTGACAAGTGTCTTTG < 41bp 1 0.082658465761974 1 0.15842992067337 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82340761 chr9:82340765 . . 0 hm6A_associated_SNPs_11196 0 1 1 1 82340750 82340771 mRNA hsa-miR-505 TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341394 82341415 mRNA hsa-miR-15a TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341394 82341415 mRNA hsa-miR-16 TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341391 82341414 mRNA hsa-miR-103 TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341391 82341414 mRNA hsa-miR-107 TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341392 82341415 mRNA hsa-miR-15b TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341395 82341415 mRNA hsa-miR-195 TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341392 82341414 mRNA hsa-miR-338-3p TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341391 82341415 mRNA hsa-miR-424 TLE4 miRanda miRanda
14034 chr9 82341414 82341414 1 + A C rs186791811 82341426 + 82341406 82341446 41 GATGCTGCAAGTTGAAATGGACTGTCCATTGACGTTCCTAA GATGCTGCCAGTTGAAATGGACTGTCCATTGACGTTCCTAA < 41bp 1 0.242303194015116 1 0.99544769525528 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 TLE4 ENSG00000106829 UTR3 Human protein_coding chr9:82341426 chr9:82341414 . . 0 hm6A_associated_SNPs_11197 0 0 1 9 82341395 82341415 mRNA hsa-miR-497 TLE4 miRanda miRanda
14034 chr9 91973860 91973860 1 + A T rs147264264 91973840 + 91973820 91973860 41 ATGACAATGTAATTTGTGTAACTGTTGAATCTGGAAATTGA ATGACAATGTAATTTGTGTAACTGTTGAATCTGGAAATTGT < 41bp 1 0.453173177249291 1 0.884563744068146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 41 SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91973840 chr9:91973860 . . 0 hm6A_associated_SNPs_11221 0 0 1 2 91973848 91973870 mRNA hsa-miR-155 SECISBP2 miRanda miRanda
14034 chr9 91973860 91973860 1 + A T rs147264264 91973840 + 91973820 91973860 41 ATGACAATGTAATTTGTGTAACTGTTGAATCTGGAAATTGA ATGACAATGTAATTTGTGTAACTGTTGAATCTGGAAATTGT < 41bp 1 0.453173177249291 1 0.884563744068146 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 41 SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91973840 chr9:91973860 . . 0 hm6A_associated_SNPs_11221 0 0 1 2 91973859 91973880 mRNA hsa-miR-455-5p SECISBP2 miRanda miRanda
14034 chr9 91974450 91974450 1 + A G rs112278779 91974448 + 91974428 91974468 41 AATCTTTCCTTTTTCAATGAACATATTCTGAATGTGGTTTC AATCTTTCCTTTTTCAATGAACGTATTCTGAATGTGGTTTC Direct Loss 1 0.433705681494763 1 0.5123171210289 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91974448 chr9:91974450 . . 0 hm6A_associated_SNPs_11222 0 0 1 4 91974439 91974463 mRNA hsa-miR-181a SECISBP2 miRanda miRanda
14034 chr9 91974450 91974450 1 + A G rs112278779 91974448 + 91974428 91974468 41 AATCTTTCCTTTTTCAATGAACATATTCTGAATGTGGTTTC AATCTTTCCTTTTTCAATGAACGTATTCTGAATGTGGTTTC Direct Loss 1 0.433705681494763 1 0.5123171210289 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91974448 chr9:91974450 . . 0 hm6A_associated_SNPs_11222 0 0 1 4 91974439 91974463 mRNA hsa-miR-181b SECISBP2 miRanda miRanda
14034 chr9 91974450 91974450 1 + A G rs112278779 91974448 + 91974428 91974468 41 AATCTTTCCTTTTTCAATGAACATATTCTGAATGTGGTTTC AATCTTTCCTTTTTCAATGAACGTATTCTGAATGTGGTTTC Direct Loss 1 0.433705681494763 1 0.5123171210289 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91974448 chr9:91974450 . . 0 hm6A_associated_SNPs_11222 0 0 1 4 91974439 91974463 mRNA hsa-miR-181c SECISBP2 miRanda miRanda
14034 chr9 91974450 91974450 1 + A G rs112278779 91974448 + 91974428 91974468 41 AATCTTTCCTTTTTCAATGAACATATTCTGAATGTGGTTTC AATCTTTCCTTTTTCAATGAACGTATTCTGAATGTGGTTTC Direct Loss 1 0.433705681494763 1 0.5123171210289 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91974448 chr9:91974450 . . 0 hm6A_associated_SNPs_11222 0 0 1 4 91974439 91974463 mRNA hsa-miR-181d SECISBP2 miRanda miRanda
14034 chr9 95875447 95875447 1 + C T rs12003264 95875457 + 95875437 95875477 41 CGAGCCGGCCCGCCAAGGGGACTGCTGCTTCTTTTTCTAAA CGAGCCGGCCTGCCAAGGGGACTGCTGCTTCTTTTTCTAAA < 41bp 1 0.373145127576095 1 0.969629764556885 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 CARD19 ENSG00000165233 UTR3 Human protein_coding chr9:95875457 chr9:95875447 . . 0 hm6A_associated_SNPs_11234 0 0 1 7 95875445 95875466 mRNA hsa-miR-15a C9orf89 miRanda miRanda
14034 chr9 95875447 95875447 1 + C T rs12003264 95875457 + 95875437 95875477 41 CGAGCCGGCCCGCCAAGGGGACTGCTGCTTCTTTTTCTAAA CGAGCCGGCCTGCCAAGGGGACTGCTGCTTCTTTTTCTAAA < 41bp 1 0.373145127576095 1 0.969629764556885 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 CARD19 ENSG00000165233 UTR3 Human protein_coding chr9:95875457 chr9:95875447 . . 0 hm6A_associated_SNPs_11234 0 0 1 7 95875447 95875466 mRNA hsa-miR-16 C9orf89 miRanda miRanda
14034 chr9 95875447 95875447 1 + C T rs12003264 95875457 + 95875437 95875477 41 CGAGCCGGCCCGCCAAGGGGACTGCTGCTTCTTTTTCTAAA CGAGCCGGCCTGCCAAGGGGACTGCTGCTTCTTTTTCTAAA < 41bp 1 0.373145127576095 1 0.969629764556885 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 CARD19 ENSG00000165233 UTR3 Human protein_coding chr9:95875457 chr9:95875447 . . 0 hm6A_associated_SNPs_11234 0 0 1 7 95875443 95875466 mRNA hsa-miR-15b C9orf89 miRanda miRanda
14034 chr9 95875447 95875447 1 + C T rs12003264 95875457 + 95875437 95875477 41 CGAGCCGGCCCGCCAAGGGGACTGCTGCTTCTTTTTCTAAA CGAGCCGGCCTGCCAAGGGGACTGCTGCTTCTTTTTCTAAA < 41bp 1 0.373145127576095 1 0.969629764556885 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 CARD19 ENSG00000165233 UTR3 Human protein_coding chr9:95875457 chr9:95875447 . . 0 hm6A_associated_SNPs_11234 0 0 1 7 95875446 95875466 mRNA hsa-miR-195 C9orf89 miRanda miRanda
14034 chr9 95875447 95875447 1 + C T rs12003264 95875457 + 95875437 95875477 41 CGAGCCGGCCCGCCAAGGGGACTGCTGCTTCTTTTTCTAAA CGAGCCGGCCTGCCAAGGGGACTGCTGCTTCTTTTTCTAAA < 41bp 1 0.373145127576095 1 0.969629764556885 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 CARD19 ENSG00000165233 UTR3 Human protein_coding chr9:95875457 chr9:95875447 . . 0 hm6A_associated_SNPs_11234 0 0 1 7 95875438 95875462 mRNA hsa-miR-324-5p C9orf89 miRanda miRanda
14034 chr9 95875447 95875447 1 + C T rs12003264 95875457 + 95875437 95875477 41 CGAGCCGGCCCGCCAAGGGGACTGCTGCTTCTTTTTCTAAA CGAGCCGGCCTGCCAAGGGGACTGCTGCTTCTTTTTCTAAA < 41bp 1 0.373145127576095 1 0.969629764556885 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 CARD19 ENSG00000165233 UTR3 Human protein_coding chr9:95875457 chr9:95875447 . . 0 hm6A_associated_SNPs_11234 0 0 1 7 95875445 95875466 mRNA hsa-miR-424 C9orf89 miRanda miRanda
14034 chr9 95875447 95875447 1 + C T rs12003264 95875457 + 95875437 95875477 41 CGAGCCGGCCCGCCAAGGGGACTGCTGCTTCTTTTTCTAAA CGAGCCGGCCTGCCAAGGGGACTGCTGCTTCTTTTTCTAAA < 41bp 1 0.373145127576095 1 0.969629764556885 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 CARD19 ENSG00000165233 UTR3 Human protein_coding chr9:95875457 chr9:95875447 . . 0 hm6A_associated_SNPs_11234 0 0 1 7 95875444 95875466 mRNA hsa-miR-497 C9orf89 miRanda miRanda
14034 chr9 97849265 97849265 1 + G A rs144624528 97849260 + 97849240 97849280 41 TGATTAAATATATCCAAGAGACATTGGAAAACCTGCTGAAC TGATTAAATATATCCAAGAGACATTAGAAAACCTGCTGAAC < 41bp 1 0.7329634737048 1 0.831042468547821 experiment 0.5340730525904 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 26 C9orf3 ENSG00000148120 UTR3 Human protein_coding chr9:97849260 chr9:97849265 . . 0 hm6A_associated_SNPs_11250 0 0 1 1 97849257 97849278 mRNA hsa-miR-214 C9orf3 miRanda miRanda
14034 chr9 97849265 97849265 1 + G A rs144624528 97849279 + 97849259 97849299 41 GACATTGGAAAACCTGCTGAACATTTTACATTGGTCTGCTC GACATTAGAAAACCTGCTGAACATTTTACATTGGTCTGCTC < 41bp 1 0.654847320598129 1 0.651839792728424 experiment 0.690305358803742 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 C9orf3 ENSG00000148120 UTR3 Human protein_coding chr9:97849279 chr9:97849265 . . 0 hm6A_associated_SNPs_11251 0 0 1 1 97849257 97849278 mRNA hsa-miR-214 C9orf3 miRanda miRanda
14034 chr9 98643479 98643479 1 + C G rs61746533 98643495 + 98643475 98643515 41 GAGACTACCAAAGAGAAGGAACCCGGTTTCTTTATGGACAC GAGAGTACCAAAGAGAAGGAACCCGGTTTCTTTATGGACAC < 41bp 1 0.759151555942211 1 0.944085836410522 experiment 0.481696888115577 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98643495 chr9:98643479 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_11252 0 0 1 1 98643466 98643488 mRNA hsa-miR-9 C9orf102 miRanda miRanda
14034 chr9 98643511 98643511 1 + G A rs61740729 98643495 + 98643475 98643515 41 GAGACTACCAAAGAGAAGGAACCCGGTTTCTTTATGGACAC GAGACTACCAAAGAGAAGGAACCCGGTTTCTTTATGAACAC < 41bp 1 0.740284206017654 1 0.938944458961487 experiment 0.519431587964691 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98643495 chr9:98643511 nonsynonymous SNV 0.963 1 hm6A_associated_SNPs_11253 0 0 1 1 98643498 98643519 mRNA hsa-miR-142-3p C9orf102 miRanda miRanda
14034 chr9 99252518 99252518 1 + T C rs150998510 99252530 + 99252510 99252550 41 CAAGAAGATGAAGAATGGTGACTGTGTTTTTATTGAAGGAA CAAGAAGACGAAGAATGGTGACTGTGTTTTTATTGAAGGAA < 41bp 1 0.723238102603196 1 0.947574615478516 experiment 0.553523794793608 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 HABP4 ENSG00000130956 UTR3 Human protein_coding chr9:99252530 chr9:99252518 . . 0 hm6A_associated_SNPs_11264 0 0 1 2 99252510 99252533 mRNA hsa-miR-29b HABP4 miRanda miRanda
14034 chr9 99252518 99252518 1 + T C rs150998510 99252530 + 99252510 99252550 41 CAAGAAGATGAAGAATGGTGACTGTGTTTTTATTGAAGGAA CAAGAAGACGAAGAATGGTGACTGTGTTTTTATTGAAGGAA < 41bp 1 0.723238102603196 1 0.947574615478516 experiment 0.553523794793608 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 HABP4 ENSG00000130956 UTR3 Human protein_coding chr9:99252530 chr9:99252518 . . 0 hm6A_associated_SNPs_11264 0 0 1 2 99252511 99252533 mRNA hsa-miR-29c HABP4 miRanda miRanda
14034 chr9 100617375 100617375 1 + T C rs7046645 100617386 + 100617366 100617406 41 TCCCCGCAATCTGAGAACGAACAGGAATGGAGAGAGGACTC TCCCCGCAACCTGAGAACGAACAGGAATGGAGAGAGGACTC < 41bp 1 0.326277525470805 1 0.993368566036224 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 FOXE1 ENSG00000178919 UTR3 Human protein_coding chr9:100617386 chr9:100617375 . . 0 hm6A_associated_SNPs_11273 0 0 0 1 100617375 100617398 mRNA hsa-miR-136 FOXE1 miRanda miRanda
14034 chr9 101611441 101611441 1 + A T rs78514784 101611421 + 101611401 101611441 41 AAGGAGACTGTGGAGCCAGGACTCTGCCCAACAAAGACTTA AAGGAGACTGTGGAGCCAGGACTCTGCCCAACAAAGACTTT < 41bp 1 0.558977985926237 1 0.999006271362305 experiment 0.882044028147526 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 GALNT12 ENSG00000267026 ncRNA_exonic Human antisense chr9:101611421 chr9:101611441 . . 0 hm6A_associated_SNPs_11281 0 0 1 1 101611435 101611460 mRNA hsa-miR-544 GALNT12 miRanda miRanda
14034 chr9 101611441 101611441 1 + A T rs78514784 101611437 + 101611417 101611457 41 CAGGACTCTGCCCAACAAAGACTTAGCTAAGCAGTGACCAG CAGGACTCTGCCCAACAAAGACTTTGCTAAGCAGTGACCAG < 41bp 1 0.681696729185759 1 0.999496877193451 experiment 0.636606541628482 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 25 GALNT12 ENSG00000267026 ncRNA_exonic Human antisense chr9:101611437 chr9:101611441 . . 0 hm6A_associated_SNPs_11282 0 0 1 1 101611435 101611460 mRNA hsa-miR-544 GALNT12 miRanda miRanda
14034 chr9 101832322 101832322 1 + C A rs114763308 101832309 + 101832289 101832329 41 TACAACAGCAACCAAAGAAAACATACCTCAATACACTCAAA TACAACAGCAACCAAAGAAAACATACCTCAATAAACTCAAA < 41bp 1 0.175293541653766 1 0.946088194847107 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 COL15A1 ENSG00000204291 UTR3 Human protein_coding chr9:101832309 chr9:101832322 . . 0 hm6A_associated_SNPs_11284 0 0 0 1 101832306 101832328 mRNA hsa-miR-122 COL15A1 miRanda miRanda
14034 chr9 101832322 101832322 1 + C A rs114763308 101832330 + 101832310 101832350 41 CATACCTCAATACACTCAAAACTGAAGACATAGAGGACTCA CATACCTCAATAAACTCAAAACTGAAGACATAGAGGACTCA < 41bp 1 0.187767093554284 1 0.991298675537109 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 COL15A1 ENSG00000204291 UTR3 Human protein_coding chr9:101832330 chr9:101832322 . . 0 hm6A_associated_SNPs_11285 0 0 0 1 101832306 101832328 mRNA hsa-miR-122 COL15A1 miRanda miRanda
14034 chr9 101832322 101832322 1 + C A rs114763308 101832337 + 101832317 101832357 41 CAATACACTCAAAACTGAAGACATAGAGGACTCAGATCAAA CAATAAACTCAAAACTGAAGACATAGAGGACTCAGATCAAA < 41bp 1 0.224078363152828 1 0.989650130271912 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 COL15A1 ENSG00000204291 UTR3 Human protein_coding chr9:101832337 chr9:101832322 . . 0 hm6A_associated_SNPs_11286 0 0 0 1 101832306 101832328 mRNA hsa-miR-122 COL15A1 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626418 102626440 mRNA hsa-miR-17 NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626418 102626440 mRNA hsa-miR-20a NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626418 102626440 mRNA hsa-miR-93 NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626418 102626440 mRNA hsa-miR-106a NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626420 102626440 mRNA hsa-miR-106b NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626420 102626439 mRNA hsa-miR-302a NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626411 102626439 mRNA hsa-miR-302b NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626419 102626439 mRNA hsa-miR-302c NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626419 102626439 mRNA hsa-miR-302d NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626417 102626439 mRNA hsa-miR-372 NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626419 102626439 mRNA hsa-miR-373 NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626418 102626440 mRNA hsa-miR-20b NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626419 102626439 mRNA hsa-miR-520e NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626419 102626439 mRNA hsa-miR-520a-3p NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626421 102626439 mRNA hsa-miR-520b NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626420 102626439 mRNA hsa-miR-520c-3p NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626421 102626440 mRNA hsa-miR-519d NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626419 102626439 mRNA hsa-miR-520d-3p NR4A3 miRanda miRanda
14034 chr9 102626434 102626434 1 + C T rs141819687 102626443 + 102626423 102626463 41 TGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGGAA TGCTAACAAAGTACTTTTGGACAATGCTATCCCAGCAGGAA < 41bp 1 0.327075801814716 1 0.980657875537872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 NR4A3 ENSG00000119508 UTR3 Human protein_coding chr9:102626443 chr9:102626434 . . 0 hm6A_associated_SNPs_11291 0 0 1 19 102626423 102626439 mRNA hsa-miR-302e NR4A3 miRanda miRanda
14034 chr9 103339534 103339534 1 + A G rs73657327 103339530 + 103339510 103339550 41 TTGTGAAAATAGGCTGTTTAACAAACAGATTGGAATAAAGC TTGTGAAAATAGGCTGTTTAACAAGCAGATTGGAATAAAGC < 41bp 1 0.183290955928284 1 0.567374587059021 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 25 MSANTD3-TMEFF1;TMEFF1 ENSG00000241697;ENSG00000251349 UTR3 Human other chr9:103339530 chr9:103339534 . . 0 hm6A_associated_SNPs_11293 0 0 1 2 103339534 103339555 mRNA hsa-miR-135a TMEFF1 miRanda miRanda
14034 chr9 103339534 103339534 1 + A G rs73657327 103339530 + 103339510 103339550 41 TTGTGAAAATAGGCTGTTTAACAAACAGATTGGAATAAAGC TTGTGAAAATAGGCTGTTTAACAAGCAGATTGGAATAAAGC < 41bp 1 0.183290955928284 1 0.567374587059021 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 25 MSANTD3-TMEFF1;TMEFF1 ENSG00000241697;ENSG00000251349 UTR3 Human other chr9:103339530 chr9:103339534 . . 0 hm6A_associated_SNPs_11293 0 0 1 2 103339534 103339555 mRNA hsa-miR-135b TMEFF1 miRanda miRanda
14034 chr9 104172226 104172226 1 + T C rs532720082 104172215 + 104172195 104172235 41 GAGCATGGGTGCTCTGAGGGACAAAGTTGGATTAGTATAAG GAGCATGGGTGCTCTGAGGGACAAAGTTGGACTAGTATAAG < 41bp 1 0.460619233396302 1 0.759670078754425 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 ZNF189 ENSG00000136870 UTR3 Human protein_coding chr9:104172215 chr9:104172226 . . 0 hm6A_associated_SNPs_11295 0 0 1 1 104172216 104172239 mRNA hsa-miR-204 ZNF189 miRanda miRanda
14034 chr9 104172229 104172229 1 + G A rs79270653 104172215 + 104172195 104172235 41 GAGCATGGGTGCTCTGAGGGACAAAGTTGGATTAGTATAAG GAGCATGGGTGCTCTGAGGGACAAAGTTGGATTAATATAAG < 41bp 1 0.473273838649687 1 0.534889340400696 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 35 ZNF189 ENSG00000136870 UTR3 Human protein_coding chr9:104172215 chr9:104172229 . . 0 hm6A_associated_SNPs_11296 0 0 1 1 104172216 104172239 mRNA hsa-miR-204 ZNF189 miRanda miRanda
14034 chr9 104324934 104324934 1 + T C rs41282151 104324923 + 104324903 104324943 41 GGTTTCAGAATGAATTAGAAACAAATAACTCTTACTGTCTT GGTTTCAGAATGAATTAGAAACAAATAACTCCTACTGTCTT < 41bp 1 0.704322093796853 1 0.913917303085327 experiment 0.591355812406295 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 RNF20 ENSG00000155827 UTR3 Human protein_coding chr9:104324923 chr9:104324934 . . 0 hm6A_associated_SNPs_11298 0 0 1 1 104324920 104324946 mRNA hsa-miR-7 RNF20 miRanda miRanda
14034 chr9 106902622 106902622 1 + G A rs16923751 106902614 + 106902594 106902634 41 CCTTTAGAACTTGAAAGATGACACTAGCGAACACCATGAGA CCTTTAGAACTTGAAAGATGACACTAGCAAACACCATGAGA < 41bp 1 0.375154688770333 1 0.0109412670135498 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 29 SMC2 ENSG00000136824 UTR3 Human protein_coding chr9:106902614 chr9:106902622 . . 0 hm6A_associated_SNPs_11302 0 0 1 1 106902621 106902642 mRNA hsa-miR-144 SMC2 miRanda miRanda
14034 chr9 108536811 108536811 1 + A G rs12338851 108536802 + 108536782 108536822 41 AAAATTGCTAGGTATGGAGAACAATTCCTATTTTATTTTGA AAAATTGCTAGGTATGGAGAACAATTCCTGTTTTATTTTGA < 41bp 1 0.115151859115152 1 0.560095489025116 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536802 chr9:108536811 . . 0 hm6A_associated_SNPs_11311 0 0 1 2 108536808 108536830 mRNA hsa-miR-199a-5p TMEM38B miRanda miRanda
14034 chr9 108536811 108536811 1 + A G rs12338851 108536802 + 108536782 108536822 41 AAAATTGCTAGGTATGGAGAACAATTCCTATTTTATTTTGA AAAATTGCTAGGTATGGAGAACAATTCCTGTTTTATTTTGA < 41bp 1 0.115151859115152 1 0.560095489025116 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536802 chr9:108536811 . . 0 hm6A_associated_SNPs_11311 0 0 1 2 108536808 108536830 mRNA hsa-miR-199b-5p TMEM38B miRanda miRanda
14034 chr9 110093519 110093519 1 + C T rs11573729 110093499 + 110093479 110093519 41 CTATTATGAAAATAAATGAAACTGGCTGGGTATGGTGGCTC CTATTATGAAAATAAATGAAACTGGCTGGGTATGGTGGCTT < 41bp 1 0.10241013966826 1 0.356758892536163 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 RAD23B ENSG00000119318 UTR3 Human protein_coding chr9:110093499 chr9:110093519 . . 0 hm6A_associated_SNPs_11316 0 0 0 3 110093497 110093519 mRNA hsa-miR-29a RAD23B miRanda miRanda
14034 chr9 110093519 110093519 1 + C T rs11573729 110093499 + 110093479 110093519 41 CTATTATGAAAATAAATGAAACTGGCTGGGTATGGTGGCTC CTATTATGAAAATAAATGAAACTGGCTGGGTATGGTGGCTT < 41bp 1 0.10241013966826 1 0.356758892536163 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 RAD23B ENSG00000119318 UTR3 Human protein_coding chr9:110093499 chr9:110093519 . . 0 hm6A_associated_SNPs_11316 0 0 0 3 110093496 110093519 mRNA hsa-miR-29b RAD23B miRanda miRanda
14034 chr9 110093519 110093519 1 + C T rs11573729 110093499 + 110093479 110093519 41 CTATTATGAAAATAAATGAAACTGGCTGGGTATGGTGGCTC CTATTATGAAAATAAATGAAACTGGCTGGGTATGGTGGCTT < 41bp 1 0.10241013966826 1 0.356758892536163 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 RAD23B ENSG00000119318 UTR3 Human protein_coding chr9:110093499 chr9:110093519 . . 0 hm6A_associated_SNPs_11316 0 0 0 3 110093497 110093519 mRNA hsa-miR-29c RAD23B miRanda miRanda
14034 chr9 112931415 112931415 1 + T G rs564120658 112931421 + 112931401 112931441 41 AATAGTTCTTCATGTCACAAACACAATCTATTCTACATGAG AATAGTTCTTCATGGCACAAACACAATCTATTCTACATGAG < 41bp 1 0.611433104957961 1 0.0322524011135101 experiment 0.777133790084078 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 UTR3 Human other chr9:112931421 chr9:112931415 . . 0 hm6A_associated_SNPs_11328 0 0 1 2 112931400 112931421 mRNA hsa-miR-758 AKAP2 miRanda miRanda
14034 chr9 112931415 112931415 1 + T G rs564120658 112931421 + 112931401 112931441 41 AATAGTTCTTCATGTCACAAACACAATCTATTCTACATGAG AATAGTTCTTCATGGCACAAACACAATCTATTCTACATGAG < 41bp 1 0.611433104957961 1 0.0322524011135101 experiment 0.777133790084078 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 UTR3 Human other chr9:112931421 chr9:112931415 . . 0 hm6A_associated_SNPs_11328 0 0 1 2 112931400 112931421 mRNA hsa-miR-758 PALM2-AKAP2 miRanda miRanda
14034 chr9 112932270 112932270 1 + G A rs150450632 112932260 + 112932240 112932280 41 GTATTTGTAATATTAAGTTGACCTAACAAGGTATTTGCATG GTATTTGTAATATTAAGTTGACCTAACAAGATATTTGCATG < 41bp 1 0.326881212468995 1 0.000165998935699463 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 UTR3 Human other chr9:112932260 chr9:112932270 . . 0 hm6A_associated_SNPs_11329 0 0 0 2 112932268 112932289 mRNA hsa-miR-758 AKAP2 miRanda miRanda
14034 chr9 112932270 112932270 1 + G A rs150450632 112932260 + 112932240 112932280 41 GTATTTGTAATATTAAGTTGACCTAACAAGGTATTTGCATG GTATTTGTAATATTAAGTTGACCTAACAAGATATTTGCATG < 41bp 1 0.326881212468995 1 0.000165998935699463 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 UTR3 Human other chr9:112932260 chr9:112932270 . . 0 hm6A_associated_SNPs_11329 0 0 0 2 112932268 112932289 mRNA hsa-miR-758 PALM2-AKAP2 miRanda miRanda
14034 chr9 112932270 112932270 1 + G A rs150450632 112932265 + 112932245 112932285 41 TGTAATATTAAGTTGACCTAACAAGGTATTTGCATGAGTCA TGTAATATTAAGTTGACCTAACAAGATATTTGCATGAGTCA < 41bp 1 0.6636294073869 1 0.000184953212738037 experiment 0.672741185226199 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 26 AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 UTR3 Human other chr9:112932265 chr9:112932270 . . 0 hm6A_associated_SNPs_11330 0 0 0 2 112932268 112932289 mRNA hsa-miR-758 AKAP2 miRanda miRanda
14034 chr9 112932270 112932270 1 + G A rs150450632 112932265 + 112932245 112932285 41 TGTAATATTAAGTTGACCTAACAAGGTATTTGCATGAGTCA TGTAATATTAAGTTGACCTAACAAGATATTTGCATGAGTCA < 41bp 1 0.6636294073869 1 0.000184953212738037 experiment 0.672741185226199 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 26 AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 UTR3 Human other chr9:112932265 chr9:112932270 . . 0 hm6A_associated_SNPs_11330 0 0 0 2 112932268 112932289 mRNA hsa-miR-758 PALM2-AKAP2 miRanda miRanda
14034 chr9 114695299 114695299 1 + T A rs200653374 114695291 + 114695271 114695311 41 TGTATAACTACAGCTTTGTGACTGTATATAAAGGAAAAAAG TGTATAACTACAGCTTTGTGACTGTATAAAAAGGAAAAAAG < 41bp 1 0.659510326063995 1 0.910083830356598 experiment 0.680979347872011 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 UGCG ENSG00000148154 UTR3 Human protein_coding chr9:114695291 chr9:114695299 . . 0 hm6A_associated_SNPs_11336 0 0 1 1 114695299 114695321 mRNA hsa-miR-200c UGCG miRanda miRanda
14034 chr9 115234394 115234394 1 + G C rs7095 115234391 + 115234371 115234411 41 AAAGTGAACTTAAAAATAGGACAGTTTCAACAAGTCAGGAG AAAGTGAACTTAAAAATAGGACACTTTCAACAAGTCAGGAG < 41bp 1 0.437415794090551 1 0.59399950504303 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 HSDL2 ENSG00000119471 UTR3 Human protein_coding chr9:115234391 chr9:115234394 . . 0 hm6A_associated_SNPs_11340 0 0 1 1 115234384 115234403 mRNA hsa-miR-653 HSDL2 miRanda miRanda
14034 chr9 115234395 115234395 1 + T G rs117134091 115234391 + 115234371 115234411 41 AAAGTGAACTTAAAAATAGGACAGTTTCAACAAGTCAGGAG AAAGTGAACTTAAAAATAGGACAGGTTCAACAAGTCAGGAG < 41bp 1 0.380738423919882 1 0.439418733119965 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 HSDL2 ENSG00000119471 UTR3 Human protein_coding chr9:115234391 chr9:115234395 . . 0 hm6A_associated_SNPs_11341 0 0 1 1 115234384 115234403 mRNA hsa-miR-653 HSDL2 miRanda miRanda
14034 chr9 115925428 115925428 1 + C T rs80294726 115925427 + 115925407 115925447 41 GCATGGTCTTGTGTCTTAAGACAGCTGCTGTGACCAAAGGG GCATGGTCTTGTGTCTTAAGATAGCTGCTGTGACCAAAGGG Direct Loss 1 0.354595850198662 1 0.887990951538086 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 SLC31A2 ENSG00000119321;ENSG00000136867 UTR3 Human other chr9:115925427 chr9:115925428 . . 0 hm6A_associated_SNPs_11345 0 0 0 4 115925422 115925444 mRNA hsa-miR-96 SLC31A2 miRanda miRanda
14034 chr9 115925428 115925428 1 + C T rs80294726 115925427 + 115925407 115925447 41 GCATGGTCTTGTGTCTTAAGACAGCTGCTGTGACCAAAGGG GCATGGTCTTGTGTCTTAAGATAGCTGCTGTGACCAAAGGG Direct Loss 1 0.354595850198662 1 0.887990951538086 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 SLC31A2 ENSG00000119321;ENSG00000136867 UTR3 Human other chr9:115925427 chr9:115925428 . . 0 hm6A_associated_SNPs_11345 0 0 0 4 115925428 115925449 mRNA hsa-miR-204 SLC31A2 miRanda miRanda
14034 chr9 115925428 115925428 1 + C T rs80294726 115925427 + 115925407 115925447 41 GCATGGTCTTGTGTCTTAAGACAGCTGCTGTGACCAAAGGG GCATGGTCTTGTGTCTTAAGATAGCTGCTGTGACCAAAGGG Direct Loss 1 0.354595850198662 1 0.887990951538086 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 SLC31A2 ENSG00000119321;ENSG00000136867 UTR3 Human other chr9:115925427 chr9:115925428 . . 0 hm6A_associated_SNPs_11345 0 0 0 4 115925427 115925449 mRNA hsa-miR-211 SLC31A2 miRanda miRanda
14034 chr9 115925428 115925428 1 + C T rs80294726 115925427 + 115925407 115925447 41 GCATGGTCTTGTGTCTTAAGACAGCTGCTGTGACCAAAGGG GCATGGTCTTGTGTCTTAAGATAGCTGCTGTGACCAAAGGG Direct Loss 1 0.354595850198662 1 0.887990951538086 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 SLC31A2 ENSG00000119321;ENSG00000136867 UTR3 Human other chr9:115925427 chr9:115925428 . . 0 hm6A_associated_SNPs_11345 0 0 0 4 115925423 115925446 mRNA hsa-miR-9 SLC31A2 miRanda miRanda
14034 chr9 116054568 116054568 1 + T C rs565590250 116054554 + 116054534 116054574 41 TCACAGCACCCAGGATTGTGACTGACTCTGCATTTTTAATT TCACAGCACCCAGGATTGTGACTGACTCTGCATTCTTAATT < 41bp 1 0.785195934649802 1 0.91503918170929 experiment 0.429608130700396 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 35 PRPF4 ENSG00000136875 UTR3 Human protein_coding chr9:116054554 chr9:116054568 . . 0 hm6A_associated_SNPs_11354 0 0 1 1 116054558 116054579 mRNA hsa-miR-186 PRPF4 miRanda miRanda
14034 chr9 117360336 117360336 1 + A T rs73656154 117360349 + 117360329 117360369 41 CTAGTTTAAAAAAAAAAAAAACCACATAACAATTCTTTGAA CTAGTTTTAAAAAAAAAAAAACCACATAACAATTCTTTGAA < 41bp 1 0.109730652307314 1 0.0429793000221252 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 8 ATP6V1G1 ENSG00000136888 UTR3 Human protein_coding chr9:117360349 chr9:117360336 . . 0 hm6A_associated_SNPs_11374 0 0 1 2 117360334 117360355 mRNA hsa-miR-140-5p ATP6V1G1 miRanda miRanda
14034 chr9 117360336 117360336 1 + A T rs73656154 117360349 + 117360329 117360369 41 CTAGTTTAAAAAAAAAAAAAACCACATAACAATTCTTTGAA CTAGTTTTAAAAAAAAAAAAACCACATAACAATTCTTTGAA < 41bp 1 0.109730652307314 1 0.0429793000221252 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 8 ATP6V1G1 ENSG00000136888 UTR3 Human protein_coding chr9:117360349 chr9:117360336 . . 0 hm6A_associated_SNPs_11374 0 0 1 2 117360335 117360356 mRNA hsa-miR-299-3p ATP6V1G1 miRanda miRanda
14034 chr9 117360350 117360350 1 + C A rs527408983 117360349 + 117360329 117360369 41 CTAGTTTAAAAAAAAAAAAAACCACATAACAATTCTTTGAA CTAGTTTAAAAAAAAAAAAAAACACATAACAATTCTTTGAA Direct Loss 1 0.109741243230756 1 0.0233622789382935 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 22 ATP6V1G1 ENSG00000136888 UTR3 Human protein_coding chr9:117360349 chr9:117360350 . . 0 hm6A_associated_SNPs_11375 0 0 1 3 117360334 117360355 mRNA hsa-miR-140-5p ATP6V1G1 miRanda miRanda
14034 chr9 117360350 117360350 1 + C A rs527408983 117360349 + 117360329 117360369 41 CTAGTTTAAAAAAAAAAAAAACCACATAACAATTCTTTGAA CTAGTTTAAAAAAAAAAAAAAACACATAACAATTCTTTGAA Direct Loss 1 0.109741243230756 1 0.0233622789382935 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 22 ATP6V1G1 ENSG00000136888 UTR3 Human protein_coding chr9:117360349 chr9:117360350 . . 0 hm6A_associated_SNPs_11375 0 0 1 3 117360346 117360367 mRNA hsa-miR-186 ATP6V1G1 miRanda miRanda
14034 chr9 117360350 117360350 1 + C A rs527408983 117360349 + 117360329 117360369 41 CTAGTTTAAAAAAAAAAAAAACCACATAACAATTCTTTGAA CTAGTTTAAAAAAAAAAAAAAACACATAACAATTCTTTGAA Direct Loss 1 0.109741243230756 1 0.0233622789382935 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 22 ATP6V1G1 ENSG00000136888 UTR3 Human protein_coding chr9:117360349 chr9:117360350 . . 0 hm6A_associated_SNPs_11375 0 0 1 3 117360335 117360356 mRNA hsa-miR-299-3p ATP6V1G1 miRanda miRanda
14034 chr9 117406381 117406381 1 + A G rs2183018 117406379 + 117406359 117406399 41 GGTTATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTG GGTTATGTTTCCCGACATGAACGTTGTCCTGGAATGAAGTG Direct Loss 1 0.660451752385165 1 0.892877995967865 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 23 TMEM268 ENSG00000157693 UTR3 Human protein_coding chr9:117406379 chr9:117406381 . . 0 hm6A_associated_SNPs_11377 0 0 1 1 117406377 117406401 mRNA hsa-miR-181b C9orf91 miRanda miRanda
14034 chr9 119462491 119462491 1 + C T rs556842802 119462490 + 119462470 119462510 41 TAAGACATCATATTCCCGTAACATTATGTCTCAGTCTGATC TAAGACATCATATTCCCGTAATATTATGTCTCAGTCTGATC Direct Loss 1 0.625842083622368 1 0.504869401454926 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 22 TRIM32 ENSG00000119401 UTR3 Human protein_coding chr9:119462490 chr9:119462491 . . 0 hm6A_associated_SNPs_11389 0 0 1 1 119462490 119462511 mRNA hsa-miR-383 TRIM32 miRanda miRanda
14034 chr9 119462675 119462675 1 + C G rs116058338 119462668 + 119462648 119462688 41 CTAGTTGGTTGGTATTGATGACTTCAGCCTGGAAATTGCTT CTAGTTGGTTGGTATTGATGACTTCAGGCTGGAAATTGCTT < 41bp 1 0.645470745414912 1 0.533895969390869 experiment 0.709058509170177 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 TRIM32 ENSG00000119401 UTR3 Human protein_coding chr9:119462668 chr9:119462675 . . 0 hm6A_associated_SNPs_11390 2 0 1 1 119462657 119462679 mRNA hsa-miR-125a-3p TRIM32 miRanda miRanda
14034 chr9 125085277 125085277 1 + A C rs529015645 125085259 + 125085239 125085279 41 GGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCACC GGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCCCC < 41bp 1 0.416661787407206 1 0.511593461036682 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085259 chr9:125085277 . . 0 hm6A_associated_SNPs_11409 0 0 1 3 125085275 125085296 mRNA hsa-miR-93 MRRF miRanda miRanda
14034 chr9 125085277 125085277 1 + A C rs529015645 125085259 + 125085239 125085279 41 GGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCACC GGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCCCC < 41bp 1 0.416661787407206 1 0.511593461036682 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085259 chr9:125085277 . . 0 hm6A_associated_SNPs_11409 0 0 1 3 125085261 125085284 mRNA hsa-miR-128 MRRF miRanda miRanda
14034 chr9 125085277 125085277 1 + A C rs529015645 125085259 + 125085239 125085279 41 GGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCACC GGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCCCC < 41bp 1 0.416661787407206 1 0.511593461036682 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085259 chr9:125085277 . . 0 hm6A_associated_SNPs_11409 0 0 1 3 125085258 125085282 mRNA hsa-miR-125a-3p MRRF miRanda miRanda
14034 chr9 125085277 125085277 1 + A C rs529015645 125085289 + 125085269 125085309 41 TGGCCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATT TGGCCTTCCCCTGTGACTGGACACTTTACTAGAGGCCCATT < 41bp 1 0.768119441983557 1 0.821007370948792 experiment 0.463761116032886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085289 chr9:125085277 . . 0 hm6A_associated_SNPs_11410 0 0 1 3 125085275 125085296 mRNA hsa-miR-93 MRRF miRanda miRanda
14034 chr9 125085277 125085277 1 + A C rs529015645 125085289 + 125085269 125085309 41 TGGCCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATT TGGCCTTCCCCTGTGACTGGACACTTTACTAGAGGCCCATT < 41bp 1 0.768119441983557 1 0.821007370948792 experiment 0.463761116032886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085289 chr9:125085277 . . 0 hm6A_associated_SNPs_11410 0 0 1 3 125085261 125085284 mRNA hsa-miR-128 MRRF miRanda miRanda
14034 chr9 125085277 125085277 1 + A C rs529015645 125085289 + 125085269 125085309 41 TGGCCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATT TGGCCTTCCCCTGTGACTGGACACTTTACTAGAGGCCCATT < 41bp 1 0.768119441983557 1 0.821007370948792 experiment 0.463761116032886 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085289 chr9:125085277 . . 0 hm6A_associated_SNPs_11410 0 0 1 3 125085258 125085282 mRNA hsa-miR-125a-3p MRRF miRanda miRanda
14034 chr9 125085283 125085283 1 + G A rs191894893 125085289 + 125085269 125085309 41 TGGCCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATT TGGCCTTCACCTGTAACTGGACACTTTACTAGAGGCCCATT < 41bp 1 0.76340775915572 1 0.85210132598877 experiment 0.47318448168856 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085289 chr9:125085283 . . 0 hm6A_associated_SNPs_11411 0 0 0 2 125085275 125085296 mRNA hsa-miR-93 MRRF miRanda miRanda
14034 chr9 125085283 125085283 1 + G A rs191894893 125085289 + 125085269 125085309 41 TGGCCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATT TGGCCTTCACCTGTAACTGGACACTTTACTAGAGGCCCATT < 41bp 1 0.76340775915572 1 0.85210132598877 experiment 0.47318448168856 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 MRRF ENSG00000148187 UTR3 Human protein_coding chr9:125085289 chr9:125085283 . . 0 hm6A_associated_SNPs_11411 0 0 0 2 125085261 125085284 mRNA hsa-miR-128 MRRF miRanda miRanda
14034 chr9 127114040 127114040 1 + G A rs28687204 127114043 + 127114023 127114063 41 TTCTGCAACTTCCTAGCGTGACTTTGGGCTTGGGCAAGTTT TTCTGCAACTTCCTAGCATGACTTTGGGCTTGGGCAAGTTT < 41bp 1 0.22207950762202 1 0.886204481124878 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 18 NEK6 ENSG00000119408 UTR3 Human protein_coding chr9:127114043 chr9:127114040 . . 0 hm6A_associated_SNPs_11420 0 0 1 1 127114024 127114047 mRNA hsa-miR-224 NEK6 miRanda miRanda
14034 chr9 127114323 127114323 1 + G C rs76125733 127114320 + 127114300 127114340 41 TCCTTATTTCTTGTTCCCAAACAGGATTAACTGTGAAGACT TCCTTATTTCTTGTTCCCAAACACGATTAACTGTGAAGACT < 41bp 1 0.2939552382422 1 0.937479019165039 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 NEK6 ENSG00000119408 UTR3 Human protein_coding chr9:127114320 chr9:127114323 . . 0 hm6A_associated_SNPs_11423 0 0 1 3 127114316 127114336 mRNA hsa-miR-27a NEK6 miRanda miRanda
14034 chr9 127114323 127114323 1 + G C rs76125733 127114320 + 127114300 127114340 41 TCCTTATTTCTTGTTCCCAAACAGGATTAACTGTGAAGACT TCCTTATTTCTTGTTCCCAAACACGATTAACTGTGAAGACT < 41bp 1 0.2939552382422 1 0.937479019165039 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 NEK6 ENSG00000119408 UTR3 Human protein_coding chr9:127114320 chr9:127114323 . . 0 hm6A_associated_SNPs_11423 0 0 1 3 127114320 127114336 mRNA hsa-miR-27b NEK6 miRanda miRanda
14034 chr9 127114323 127114323 1 + G C rs76125733 127114320 + 127114300 127114340 41 TCCTTATTTCTTGTTCCCAAACAGGATTAACTGTGAAGACT TCCTTATTTCTTGTTCCCAAACACGATTAACTGTGAAGACT < 41bp 1 0.2939552382422 1 0.937479019165039 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 NEK6 ENSG00000119408 UTR3 Human protein_coding chr9:127114320 chr9:127114323 . . 0 hm6A_associated_SNPs_11423 0 0 1 3 127114314 127114335 mRNA hsa-miR-128 NEK6 miRanda miRanda
14034 chr9 127114372 127114372 1 + C G rs576010496 127114356 + 127114336 127114376 41 AGACTAATTTATAAATGTGAACCTAAGAAAACTCCACCTCT AGACTAATTTATAAATGTGAACCTAAGAAAACTCCAGCTCT < 41bp 1 0.163579714165165 1 0.918636083602905 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 NEK6 ENSG00000119408 UTR3 Human protein_coding chr9:127114356 chr9:127114372 . . 0 hm6A_associated_SNPs_11424 0 0 1 1 127114361 127114382 mRNA hsa-miR-205 NEK6 miRanda miRanda
14034 chr9 130454111 130454111 1 + T C rs376329361 130454115 + 130454095 130454135 41 GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCC GAAGGTTCTTGGCCCGCTGGACTCACACAGACCCTGTACCC < 41bp 1 0.402997297317569 1 0.898353159427643 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 17 STXBP1 ENSG00000136854 UTR3 Human protein_coding chr9:130454115 chr9:130454111 . . 0 hm6A_associated_SNPs_11469 0 0 1 1 130454109 130454130 mRNA hsa-miR-296-3p STXBP1 miRanda miRanda
14034 chr9 130454111 130454111 1 + T C rs376329361 130454125 + 130454105 130454145 41 GGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG GGCCCGCTGGACTCACACAGACCCTGTACCCTCTCGGCAAG < 41bp 1 0.298073889928206 1 0.650922536849976 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 STXBP1 ENSG00000136854 UTR3 Human protein_coding chr9:130454125 chr9:130454111 . . 0 hm6A_associated_SNPs_11470 0 0 1 1 130454109 130454130 mRNA hsa-miR-296-3p STXBP1 miRanda miRanda
14034 chr9 130454459 130454459 1 + G A rs536199056 130454441 + 130454421 130454461 41 CAGCCCCCTCGCCGCCCTTGACCTCCTGCAGGCCATGTGTG CAGCCCCCTCGCCGCCCTTGACCTCCTGCAGGCCATGTATG < 41bp 1 0.106170688162752 1 0.645813584327698 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 STXBP1 ENSG00000136854 UTR3 Human protein_coding chr9:130454441 chr9:130454459 . . 0 hm6A_associated_SNPs_11471 1 0 1 2 130454435 130454459 mRNA hsa-miR-193a-3p STXBP1 miRanda miRanda
14034 chr9 130454459 130454459 1 + G A rs536199056 130454441 + 130454421 130454461 41 CAGCCCCCTCGCCGCCCTTGACCTCCTGCAGGCCATGTGTG CAGCCCCCTCGCCGCCCTTGACCTCCTGCAGGCCATGTATG < 41bp 1 0.106170688162752 1 0.645813584327698 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 STXBP1 ENSG00000136854 UTR3 Human protein_coding chr9:130454441 chr9:130454459 . . 0 hm6A_associated_SNPs_11471 1 0 1 2 130454457 130454479 mRNA hsa-miR-376a STXBP1 miRanda miRanda
14034 chr9 131051018 131051018 1 + A G rs181209395 131051031 + 131051011 131051051 41 CTTGTCCACAGCTCCCAGGGACAGAAGGGTGTGGACATGAT CTTGTCCGCAGCTCCCAGGGACAGAAGGGTGTGGACATGAT < 41bp 1 0.324281312002765 1 0.562168717384338 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 SWI5 ENSG00000175854 UTR3 Human protein_coding chr9:131051031 chr9:131051018 . . 0 hm6A_associated_SNPs_11490 0 0 1 1 131051003 131051026 mRNA hsa-miR-122 C9orf119 miRanda miRanda
14034 chr9 131151981 131151981 1 + G A rs150966477 131151970 + 131151950 131151990 41 GCTGGACTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCA GCTGGACTACCAGCTTCAGGACCAGGACAGCATCCTCTTCA < 41bp 1 0.457767176693671 1 0.891960382461548 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151970 chr9:131151981 nonsynonymous SNV 0.956 0 hm6A_associated_SNPs_11494 0 0 1 3 131151971 131151995 mRNA hsa-miR-143 URM1 miRanda miRanda
14034 chr9 131151981 131151981 1 + G A rs150966477 131151970 + 131151950 131151990 41 GCTGGACTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCA GCTGGACTACCAGCTTCAGGACCAGGACAGCATCCTCTTCA < 41bp 1 0.457767176693671 1 0.891960382461548 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151970 chr9:131151981 nonsynonymous SNV 0.956 0 hm6A_associated_SNPs_11494 0 0 1 3 131151971 131151996 mRNA hsa-miR-185 URM1 miRanda miRanda
14034 chr9 131151981 131151981 1 + G A rs150966477 131151970 + 131151950 131151990 41 GCTGGACTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCA GCTGGACTACCAGCTTCAGGACCAGGACAGCATCCTCTTCA < 41bp 1 0.457767176693671 1 0.891960382461548 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151970 chr9:131151981 nonsynonymous SNV 0.956 0 hm6A_associated_SNPs_11494 0 0 1 3 131151969 131151991 mRNA hsa-miR-488 URM1 miRanda miRanda
14034 chr9 131151981 131151981 1 + G A rs150966477 131151976 + 131151956 131151996 41 CTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCATCTCCA CTACCAGCTTCAGGACCAGGACAGCATCCTCTTCATCTCCA < 41bp 1 0.718029037888865 1 0.86519193649292 experiment 0.56394192422227 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151976 chr9:131151981 nonsynonymous SNV 0.956 0 hm6A_associated_SNPs_11495 0 0 1 3 131151971 131151995 mRNA hsa-miR-143 URM1 miRanda miRanda
14034 chr9 131151981 131151981 1 + G A rs150966477 131151976 + 131151956 131151996 41 CTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCATCTCCA CTACCAGCTTCAGGACCAGGACAGCATCCTCTTCATCTCCA < 41bp 1 0.718029037888865 1 0.86519193649292 experiment 0.56394192422227 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151976 chr9:131151981 nonsynonymous SNV 0.956 0 hm6A_associated_SNPs_11495 0 0 1 3 131151971 131151996 mRNA hsa-miR-185 URM1 miRanda miRanda
14034 chr9 131151981 131151981 1 + G A rs150966477 131151976 + 131151956 131151996 41 CTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCATCTCCA CTACCAGCTTCAGGACCAGGACAGCATCCTCTTCATCTCCA < 41bp 1 0.718029037888865 1 0.86519193649292 experiment 0.56394192422227 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151976 chr9:131151981 nonsynonymous SNV 0.956 0 hm6A_associated_SNPs_11495 0 0 1 3 131151969 131151991 mRNA hsa-miR-488 URM1 miRanda miRanda
14034 chr9 131303522 131303522 1 + G A rs10760563 131303503 + 131303483 131303523 41 AAAGAGGCAATAATAAAGGAACTGAAGACAGCTGTATTTGG AAAGAGGCAATAATAAAGGAACTGAAGACAGCTGTATTTAG < 41bp 1 0.723538524526689 1 0.915005207061768 experiment 0.552922950946621 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 40 MIR1268A ENSG00000228395 ncRNA_intronic Human antisense chr9:131303503 chr9:131303522 . . 0 hm6A_associated_SNPs_11509 2 1 1 1 131303506 131303527 mRNA hsa-miR-150 GLE1 miRanda miRanda
14034 chr9 131395761 131395761 1 + C A rs113912557 131395758 + 131395738 131395778 41 GAGAAAATGGTGCTTCACTAACCCGCTTCCGGTCCAGTCAC GAGAAAATGGTGCTTCACTAACCAGCTTCCGGTCCAGTCAC < 41bp 1 0.0858649639668585 1 0.962367355823517 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 MIR1268A ENSG00000197694 UTR3 Human protein_coding chr9:131395758 chr9:131395761 . . 0 hm6A_associated_SNPs_11521 0 0 1 2 131395761 131395779 mRNA hsa-miR-134 SPTAN1 miRanda miRanda
14034 chr9 131395761 131395761 1 + C A rs113912557 131395758 + 131395738 131395778 41 GAGAAAATGGTGCTTCACTAACCCGCTTCCGGTCCAGTCAC GAGAAAATGGTGCTTCACTAACCAGCTTCCGGTCCAGTCAC < 41bp 1 0.0858649639668585 1 0.962367355823517 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 MIR1268A ENSG00000197694 UTR3 Human protein_coding chr9:131395758 chr9:131395761 . . 0 hm6A_associated_SNPs_11521 0 0 1 2 131395761 131395781 mRNA hsa-miR-758 SPTAN1 miRanda miRanda
14034 chr9 131395762 131395762 1 + G A rs188688870 131395758 + 131395738 131395778 41 GAGAAAATGGTGCTTCACTAACCCGCTTCCGGTCCAGTCAC GAGAAAATGGTGCTTCACTAACCCACTTCCGGTCCAGTCAC < 41bp 1 0.0754514799993313 1 0.947946488857269 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 MIR1268A ENSG00000197694 UTR3 Human protein_coding chr9:131395758 chr9:131395762 . . 0 hm6A_associated_SNPs_11522 1 0 1 2 131395761 131395779 mRNA hsa-miR-134 SPTAN1 miRanda miRanda
14034 chr9 131395762 131395762 1 + G A rs188688870 131395758 + 131395738 131395778 41 GAGAAAATGGTGCTTCACTAACCCGCTTCCGGTCCAGTCAC GAGAAAATGGTGCTTCACTAACCCACTTCCGGTCCAGTCAC < 41bp 1 0.0754514799993313 1 0.947946488857269 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 MIR1268A ENSG00000197694 UTR3 Human protein_coding chr9:131395758 chr9:131395762 . . 0 hm6A_associated_SNPs_11522 1 0 1 2 131395761 131395781 mRNA hsa-miR-758 SPTAN1 miRanda miRanda
14034 chr9 131395768 131395768 1 + G A rs11543348 131395758 + 131395738 131395778 41 GAGAAAATGGTGCTTCACTAACCCGCTTCCGGTCCAGTCAC GAGAAAATGGTGCTTCACTAACCCGCTTCCAGTCCAGTCAC < 41bp 1 0.0827359332194843 1 0.940651595592499 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 MIR1268A ENSG00000197694 UTR3 Human protein_coding chr9:131395758 chr9:131395768 . . 0 hm6A_associated_SNPs_11523 1 0 1 2 131395761 131395779 mRNA hsa-miR-134 SPTAN1 miRanda miRanda
14034 chr9 131395768 131395768 1 + G A rs11543348 131395758 + 131395738 131395778 41 GAGAAAATGGTGCTTCACTAACCCGCTTCCGGTCCAGTCAC GAGAAAATGGTGCTTCACTAACCCGCTTCCAGTCCAGTCAC < 41bp 1 0.0827359332194843 1 0.940651595592499 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 MIR1268A ENSG00000197694 UTR3 Human protein_coding chr9:131395758 chr9:131395768 . . 0 hm6A_associated_SNPs_11523 1 0 1 2 131395761 131395781 mRNA hsa-miR-758 SPTAN1 miRanda miRanda
14034 chr9 131483159 131483159 1 + A G rs528140930 131483162 + 131483142 131483182 41 ATATGGTTTGTCTTTTTAAGACTGGACTTGCTTTATATTAA ATATGGTTTGTCTTTTTGAGACTGGACTTGCTTTATATTAA < 41bp 1 0.24185234085951 1 0.943736374378204 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 18 PKN3;ZDHHC12 ENSG00000160446;ENSG00000160447 UTR3 Human other chr9:131483162 chr9:131483159 . . 0 hm6A_associated_SNPs_11534 0 0 1 1 131483156 131483179 mRNA hsa-miR-340 PKN3 miRanda miRanda
14034 chr9 131483159 131483159 1 + A G rs528140930 131483167 + 131483147 131483187 41 GTTTGTCTTTTTAAGACTGGACTTGCTTTATATTAAATTTG GTTTGTCTTTTTGAGACTGGACTTGCTTTATATTAAATTTG < 41bp 1 0.231522051751959 1 0.958769202232361 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 PKN3;ZDHHC12 ENSG00000160446;ENSG00000160447 UTR3 Human other chr9:131483167 chr9:131483159 . . 0 hm6A_associated_SNPs_11535 0 0 1 1 131483156 131483179 mRNA hsa-miR-340 PKN3 miRanda miRanda
14034 chr9 131571953 131571953 1 + G A rs77320534 131571954 + 131571934 131571974 41 AAGGGAGAAAGGAGTTGGAGACAAGATCCTCTTCATTTTCC AAGGGAGAAAGGAGTTGGAAACAAGATCCTCTTCATTTTCC < 41bp 1 0.561238032886037 1 0.247598826885223 experiment 0.877523934227926 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 TBC1D13 ENSG00000107021 UTR3 Human protein_coding chr9:131571954 chr9:131571953 . . 0 hm6A_associated_SNPs_11539 0 0 1 1 131571947 131571969 mRNA hsa-miR-488 TBC1D13 miRanda miRanda
14034 chr9 131847820 131847820 1 + G A rs150999812 131847807 + 131847787 131847827 41 GTTTTCGCAGAATGCACCAAACAAACAACGCCAGGTTCCTG GTTTTCGCAGAATGCACCAAACAAACAACGCCAAGTTCCTG < 41bp 1 0.513907196860486 1 0.941180109977722 experiment 0.972185606279028 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 34 DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131847807 chr9:131847820 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_11550 0 0 1 1 131847803 131847824 mRNA hsa-miR-490-3p DOLPP1 miRanda miRanda
14034 chr9 131847820 131847820 1 + G A rs150999812 131847811 + 131847791 131847831 41 TCGCAGAATGCACCAAACAAACAACGCCAGGTTCCTGGACT TCGCAGAATGCACCAAACAAACAACGCCAAGTTCCTGGACT < 41bp 1 0.580225574383151 1 0.931685447692871 experiment 0.839548851233697 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 30 DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131847811 chr9:131847820 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_11551 0 0 1 1 131847803 131847824 mRNA hsa-miR-490-3p DOLPP1 miRanda miRanda
14034 chr9 131851440 131851440 1 + G A rs561745648 131851458 + 131851438 131851478 41 AAGGTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGACC AAAGTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGACC < 41bp 1 0.545140813911923 1 0.949238240718842 experiment 0.909718372176153 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 3 DOLPP1 ENSG00000167130 UTR3 Human protein_coding chr9:131851458 chr9:131851440 . . 0 hm6A_associated_SNPs_11552 0 0 1 3 131851428 131851450 mRNA hsa-miR-133a DOLPP1 miRanda miRanda
14034 chr9 131851440 131851440 1 + G A rs561745648 131851458 + 131851438 131851478 41 AAGGTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGACC AAAGTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGACC < 41bp 1 0.545140813911923 1 0.949238240718842 experiment 0.909718372176153 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 3 DOLPP1 ENSG00000167130 UTR3 Human protein_coding chr9:131851458 chr9:131851440 . . 0 hm6A_associated_SNPs_11552 0 0 1 3 131851430 131851452 mRNA hsa-miR-9 DOLPP1 miRanda miRanda
14034 chr9 131851440 131851440 1 + G A rs561745648 131851458 + 131851438 131851478 41 AAGGTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGACC AAAGTGGACCAAAGGGCTGAACCAGCCCCTCAACCAGGACC < 41bp 1 0.545140813911923 1 0.949238240718842 experiment 0.909718372176153 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 3 DOLPP1 ENSG00000167130 UTR3 Human protein_coding chr9:131851458 chr9:131851440 . . 0 hm6A_associated_SNPs_11552 0 0 1 3 131851428 131851450 mRNA hsa-miR-133b DOLPP1 miRanda miRanda
14034 chr9 132573062 132573062 1 + C G rs147949345 132573050 + 132573030 132573070 41 AGGACGTTGCTTATTTTAAAACAAGGGAAGGACACAAAATG AGGACGTTGCTTATTTTAAAACAAGGGAAGGAGACAAAATG < 41bp 1 0.63010063551485 1 0.909456729888916 experiment 0.739798728970301 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 TOR1B ENSG00000136816 UTR3 Human protein_coding chr9:132573050 chr9:132573062 . . 0 hm6A_associated_SNPs_11576 0 0 1 2 132573060 132573082 mRNA hsa-miR-424 TOR1B miRanda miRanda
14034 chr9 132573062 132573062 1 + C G rs147949345 132573050 + 132573030 132573070 41 AGGACGTTGCTTATTTTAAAACAAGGGAAGGACACAAAATG AGGACGTTGCTTATTTTAAAACAAGGGAAGGAGACAAAATG < 41bp 1 0.63010063551485 1 0.909456729888916 experiment 0.739798728970301 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 TOR1B ENSG00000136816 UTR3 Human protein_coding chr9:132573050 chr9:132573062 . . 0 hm6A_associated_SNPs_11576 0 0 1 2 132573048 132573067 mRNA hsa-miR-599 TOR1B miRanda miRanda
14034 chr9 133456212 133456212 1 + C G rs187215826 133456217 + 133456197 133456237 41 ACATTATATTGGATCCCAGAACTTTCCAAACCTGTGGTTCC ACATTATATTGGATCGCAGAACTTTCCAAACCTGTGGTTCC < 41bp 1 0.111113806680573 1 0.927695393562317 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 16 FUBP3 ENSG00000107164 intronic Human protein_coding chr9:133456217 chr9:133456212 . . 0 hm6A_associated_SNPs_11610 0 0 1 3 133456192 133456214 mRNA hsa-miR-127-3p FUBP3 miRanda miRanda
14034 chr9 133456212 133456212 1 + C G rs187215826 133456217 + 133456197 133456237 41 ACATTATATTGGATCCCAGAACTTTCCAAACCTGTGGTTCC ACATTATATTGGATCGCAGAACTTTCCAAACCTGTGGTTCC < 41bp 1 0.111113806680573 1 0.927695393562317 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 16 FUBP3 ENSG00000107164 intronic Human protein_coding chr9:133456217 chr9:133456212 . . 0 hm6A_associated_SNPs_11610 0 0 1 3 133456195 133456218 mRNA hsa-miR-330-5p FUBP3 miRanda miRanda
14034 chr9 133456212 133456212 1 + C G rs187215826 133456217 + 133456197 133456237 41 ACATTATATTGGATCCCAGAACTTTCCAAACCTGTGGTTCC ACATTATATTGGATCGCAGAACTTTCCAAACCTGTGGTTCC < 41bp 1 0.111113806680573 1 0.927695393562317 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 16 FUBP3 ENSG00000107164 intronic Human protein_coding chr9:133456217 chr9:133456212 . . 0 hm6A_associated_SNPs_11610 0 0 1 3 133456199 133456218 mRNA hsa-miR-326 FUBP3 miRanda miRanda
14034 chr9 133456215 133456215 1 + G T rs541492254 133456217 + 133456197 133456237 41 ACATTATATTGGATCCCAGAACTTTCCAAACCTGTGGTTCC ACATTATATTGGATCCCATAACTTTCCAAACCTGTGGTTCC < 41bp 1 0.0789055685305512 1 0.491567671298981 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 FUBP3 ENSG00000107164 intronic Human protein_coding chr9:133456217 chr9:133456215 . . 0 hm6A_associated_SNPs_11611 0 0 1 2 133456195 133456218 mRNA hsa-miR-330-5p FUBP3 miRanda miRanda
14034 chr9 133456215 133456215 1 + G T rs541492254 133456217 + 133456197 133456237 41 ACATTATATTGGATCCCAGAACTTTCCAAACCTGTGGTTCC ACATTATATTGGATCCCATAACTTTCCAAACCTGTGGTTCC < 41bp 1 0.0789055685305512 1 0.491567671298981 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 FUBP3 ENSG00000107164 intronic Human protein_coding chr9:133456217 chr9:133456215 . . 0 hm6A_associated_SNPs_11611 0 0 1 2 133456199 133456218 mRNA hsa-miR-326 FUBP3 miRanda miRanda
14034 chr9 133579880 133579880 1 + A G rs147802511 133579897 + 133579877 133579917 41 ACCACACTCCAGCCTGGGTGACAGAGCGAGACTGTGTTTCA ACCGCACTCCAGCCTGGGTGACAGAGCGAGACTGTGTTTCA < 41bp 1 0.66690414708157 1 0.322163343429565 experiment 0.66619170583686 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 EXOSC2 ENSG00000130713 UTR3 Human protein_coding chr9:133579897 chr9:133579880 . . 0 hm6A_associated_SNPs_11616 0 0 1 1 133579865 133579887 mRNA hsa-miR-122 EXOSC2 miRanda miRanda
14034 chr9 133761675 133761675 1 + C T rs33977130 133761683 + 133761663 133761703 41 GCCATTTCCTCACGTGCAGGACAGCTCTTGATTTGGGTGGA GCCATTTCCTCATGTGCAGGACAGCTCTTGATTTGGGTGGA < 41bp 1 0.625541819772359 1 0.784307718276978 experiment 0.748916360455283 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 13 ABL1 ENSG00000097007 UTR3 Human protein_coding chr9:133761683 chr9:133761675 . . 0 hm6A_associated_SNPs_11626 0 0 1 1 133761671 133761693 mRNA hsa-miR-335 ABL1 miRanda miRanda
14034 chr9 133995958 133995958 1 + A G rs113017234 133995965 + 133995945 133995985 41 TGCAGAAGGGCTGACATCAAACCAAAAACTAGAGGGGGCAG TGCAGAAGGGCTGGCATCAAACCAAAAACTAGAGGGGGCAG < 41bp 1 0.186078164870668 1 0.047577291727066 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 AIF1L ENSG00000126878 UTR3 Human protein_coding chr9:133995965 chr9:133995958 . . 0 hm6A_associated_SNPs_11632 0 0 1 1 133995945 133995965 mRNA hsa-miR-599 AIF1L miRanda miRanda
14034 chr9 133995959 133995959 1 + C T rs353513 133995958 + 133995938 133995978 41 CTCCCTGTGCAGAAGGGCTGACATCAAACCAAAAACTAGAG CTCCCTGTGCAGAAGGGCTGATATCAAACCAAAAACTAGAG Direct Loss 1 0.430109799326812 1 0.111231207847595 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 AIF1L ENSG00000126878 UTR3 Human protein_coding chr9:133995958 chr9:133995959 . . 0 hm6A_associated_SNPs_11633 0 0 1 1 133995945 133995965 mRNA hsa-miR-599 AIF1L miRanda miRanda
14034 chr9 133995959 133995959 1 + C T rs353513 133995965 + 133995945 133995985 41 TGCAGAAGGGCTGACATCAAACCAAAAACTAGAGGGGGCAG TGCAGAAGGGCTGATATCAAACCAAAAACTAGAGGGGGCAG < 41bp 1 0.184740229775564 1 0.0282639265060425 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 AIF1L ENSG00000126878 UTR3 Human protein_coding chr9:133995965 chr9:133995959 . . 0 hm6A_associated_SNPs_11634 0 0 1 1 133995945 133995965 mRNA hsa-miR-599 AIF1L miRanda miRanda
14034 chr9 134109069 134109069 1 + A G rs375059955 134109074 + 134109054 134109094 41 GTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA GTTTTCCCTCCCACTGTTAAACAGTCTGTTTCCGTACAGAA < 41bp 1 0.256802504205641 1 0.924998998641968 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 16 NUP214 ENSG00000126883 UTR3 Human protein_coding chr9:134109074 chr9:134109069 . . 0 hm6A_associated_SNPs_11641 0 0 1 1 134109049 134109071 mRNA hsa-miR-299-3p NUP214 miRanda miRanda
14034 chr9 134398874 134398874 1 + G A rs57955153 134398889 + 134398869 134398909 41 GACCCGATCCTCCTTCATGAACACCCAGCAACCTGAGCAAG GACCCAATCCTCCTTCATGAACACCCAGCAACCTGAGCAAG < 41bp 1 0.451834747198311 1 0.727860033512115 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 POMT1 ENSG00000130714 UTR3 Human protein_coding chr9:134398889 chr9:134398874 . . 0 hm6A_associated_SNPs_11665 0 0 1 1 134398874 134398898 mRNA hsa-miR-138 POMT1 miRanda miRanda
14034 chr9 135565183 135565183 1 + A G rs574646310 135565199 + 135565179 135565219 41 TTTCAGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT TTTCGGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT < 41bp 1 0.791629784294143 1 0.0177116394042969 experiment 0.416740431411714 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 GTF3C4 ENSG00000125484 UTR3 Human protein_coding chr9:135565199 chr9:135565183 . . 0 hm6A_associated_SNPs_11673 0 0 1 4 135565168 135565189 mRNA hsa-miR-200b GTF3C4 miRanda miRanda
14034 chr9 135565183 135565183 1 + A G rs574646310 135565199 + 135565179 135565219 41 TTTCAGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT TTTCGGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT < 41bp 1 0.791629784294143 1 0.0177116394042969 experiment 0.416740431411714 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 GTF3C4 ENSG00000125484 UTR3 Human protein_coding chr9:135565199 chr9:135565183 . . 0 hm6A_associated_SNPs_11673 0 0 1 4 135565166 135565189 mRNA hsa-miR-200c GTF3C4 miRanda miRanda
14034 chr9 135565183 135565183 1 + A G rs574646310 135565199 + 135565179 135565219 41 TTTCAGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT TTTCGGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT < 41bp 1 0.791629784294143 1 0.0177116394042969 experiment 0.416740431411714 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 GTF3C4 ENSG00000125484 UTR3 Human protein_coding chr9:135565199 chr9:135565183 . . 0 hm6A_associated_SNPs_11673 0 0 1 4 135565168 135565189 mRNA hsa-miR-429 GTF3C4 miRanda miRanda
14034 chr9 135565183 135565183 1 + A G rs574646310 135565199 + 135565179 135565219 41 TTTCAGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT TTTCGGTATTTTTAATGTTGACATTTCCAGATGTTTCATTT < 41bp 1 0.791629784294143 1 0.0177116394042969 experiment 0.416740431411714 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 GTF3C4 ENSG00000125484 UTR3 Human protein_coding chr9:135565199 chr9:135565183 . . 0 hm6A_associated_SNPs_11673 0 0 1 4 135565181 135565201 mRNA hsa-miR-505 GTF3C4 miRanda miRanda
14034 chr9 135933537 135933537 1 + A G rs372287200 135933535 + 135933515 135933555 41 TGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCTGCCT TGACCCTAGCACTGGCTGTGACGTGCTGCTTGGTGCTGCCT Direct Loss 1 0.644042502106253 1 0.974141120910645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 GTF3C5 ENSG00000148308 UTR3 Human protein_coding chr9:135933535 chr9:135933537 . . 0 hm6A_associated_SNPs_11675 0 0 1 6 135933524 135933545 mRNA hsa-miR-15a GTF3C5 miRanda miRanda
14034 chr9 135933537 135933537 1 + A G rs372287200 135933535 + 135933515 135933555 41 TGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCTGCCT TGACCCTAGCACTGGCTGTGACGTGCTGCTTGGTGCTGCCT Direct Loss 1 0.644042502106253 1 0.974141120910645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 GTF3C5 ENSG00000148308 UTR3 Human protein_coding chr9:135933535 chr9:135933537 . . 0 hm6A_associated_SNPs_11675 0 0 1 6 135933524 135933545 mRNA hsa-miR-16 GTF3C5 miRanda miRanda
14034 chr9 135933537 135933537 1 + A G rs372287200 135933535 + 135933515 135933555 41 TGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCTGCCT TGACCCTAGCACTGGCTGTGACGTGCTGCTTGGTGCTGCCT Direct Loss 1 0.644042502106253 1 0.974141120910645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 GTF3C5 ENSG00000148308 UTR3 Human protein_coding chr9:135933535 chr9:135933537 . . 0 hm6A_associated_SNPs_11675 0 0 1 6 135933524 135933545 mRNA hsa-miR-15b GTF3C5 miRanda miRanda
14034 chr9 135933537 135933537 1 + A G rs372287200 135933535 + 135933515 135933555 41 TGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCTGCCT TGACCCTAGCACTGGCTGTGACGTGCTGCTTGGTGCTGCCT Direct Loss 1 0.644042502106253 1 0.974141120910645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 GTF3C5 ENSG00000148308 UTR3 Human protein_coding chr9:135933535 chr9:135933537 . . 0 hm6A_associated_SNPs_11675 0 0 1 6 135933522 135933545 mRNA hsa-miR-195 GTF3C5 miRanda miRanda
14034 chr9 135933537 135933537 1 + A G rs372287200 135933535 + 135933515 135933555 41 TGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCTGCCT TGACCCTAGCACTGGCTGTGACGTGCTGCTTGGTGCTGCCT Direct Loss 1 0.644042502106253 1 0.974141120910645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 GTF3C5 ENSG00000148308 UTR3 Human protein_coding chr9:135933535 chr9:135933537 . . 0 hm6A_associated_SNPs_11675 0 0 1 6 135933524 135933545 mRNA hsa-miR-424 GTF3C5 miRanda miRanda
14034 chr9 135933537 135933537 1 + A G rs372287200 135933535 + 135933515 135933555 41 TGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCTGCCT TGACCCTAGCACTGGCTGTGACGTGCTGCTTGGTGCTGCCT Direct Loss 1 0.644042502106253 1 0.974141120910645 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 GTF3C5 ENSG00000148308 UTR3 Human protein_coding chr9:135933535 chr9:135933537 . . 0 hm6A_associated_SNPs_11675 0 0 1 6 135933521 135933545 mRNA hsa-miR-497 GTF3C5 miRanda miRanda
14034 chr9 136893217 136893217 1 + T C rs145475041 136893206 + 136893186 136893226 41 AATTTTTCTTTTCTAAATAAACATCCTTTAATACACTCCTC AATTTTTCTTTTCTAAATAAACATCCTTTAACACACTCCTC < 41bp 1 0.222239981127392 1 0.00921422243118286 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 32 LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136893206 chr9:136893217 . . 0 hm6A_associated_SNPs_11687 0 0 0 1 136893203 136893225 mRNA hsa-miR-122 NCRNA00094 miRanda miRanda
14034 chr9 136895907 136895907 1 - G A rs111678534 136895925 - 136895905 136895945 41 GGGGCAGGCTTCGGGCGTGAACTGAACTCCAGACCCCTCTT GGGGCAGGCTTCGGGCGTGAACTGAACTCCAGACCCCTTTT < 41bp 1 0.368071782950188 1 0.834218084812164 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 39 LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136895925 chr9:136895907 . . 0 hm6A_associated_SNPs_11690 0 0 1 1 136895886 136895909 mRNA hsa-miR-425 BRD3 miRanda miRanda
14034 chr9 137023364 137023364 1 + C A rs72766688 137023367 + 137023347 137023387 41 TCCTAGTCTATTGTGTTCAAACAGAGTCAACAAAAGTTTTT TCCTAGTCTATTGTGTTAAAACAGAGTCAACAAAAGTTTTT < 41bp 1 0.473136000147436 1 0.885457038879395 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 WDR5 ENSG00000196363 UTR3 Human protein_coding chr9:137023367 chr9:137023364 . . 0 hm6A_associated_SNPs_11697 0 0 1 2 137023348 137023370 mRNA hsa-miR-653 WDR5 miRanda miRanda
14034 chr9 137023364 137023364 1 + C A rs72766688 137023367 + 137023347 137023387 41 TCCTAGTCTATTGTGTTCAAACAGAGTCAACAAAAGTTTTT TCCTAGTCTATTGTGTTAAAACAGAGTCAACAAAAGTTTTT < 41bp 1 0.473136000147436 1 0.885457038879395 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 WDR5 ENSG00000196363 UTR3 Human protein_coding chr9:137023367 chr9:137023364 . . 0 hm6A_associated_SNPs_11697 0 0 1 2 137023359 137023379 mRNA hsa-miR-653 WDR5 miRanda miRanda
14034 chr9 138012227 138012227 1 + G A rs41283106 138012242 + 138012222 138012262 41 CTCCCGTATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCG CTCCCATATTTGCAGCTGGAACTGCAGCCCACGGCGCCCCG < 41bp 1 0.60826009007031 1 0.995912909507751 experiment 0.78347981985938 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 OLFM1 ENSG00000130558 UTR3 Human protein_coding chr9:138012242 chr9:138012227 . . 0 hm6A_associated_SNPs_11724 0 0 1 1 138012217 138012240 mRNA hsa-miR-148a OLFM1 miRanda miRanda
14034 chr9 138012313 138012313 1 + C T rs75543408 138012296 + 138012276 138012316 41 CCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAG CCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGTGAG < 41bp 1 0.540952043796271 1 0.993492066860199 experiment 0.918095912407458 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 OLFM1 ENSG00000130558 UTR3 Human protein_coding chr9:138012296 chr9:138012313 . . 0 hm6A_associated_SNPs_11726 0 0 1 2 138012309 138012329 mRNA hsa-miR-212 OLFM1 miRanda miRanda
14034 chr9 138012313 138012313 1 + C T rs75543408 138012296 + 138012276 138012316 41 CCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGCGAG CCCTGTCCCTCTCTGGTCAAACAACATACTAAAGAGGTGAG < 41bp 1 0.540952043796271 1 0.993492066860199 experiment 0.918095912407458 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 OLFM1 ENSG00000130558 UTR3 Human protein_coding chr9:138012296 chr9:138012313 . . 0 hm6A_associated_SNPs_11726 0 0 1 2 138012309 138012329 mRNA hsa-miR-132 OLFM1 miRanda miRanda
14034 chr9 139253357 139253357 1 + G A rs553580721 139253352 + 139253332 139253372 41 GAGGGAATGGCTGGGCATGAACTTCGACATTCCAAAACCCC GAGGGAATGGCTGGGCATGAACTTCAACATTCCAAAACCCC < 41bp 1 0.429257331756678 1 0.95175564289093 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 GPSM1 ENSG00000160360 UTR3 Human protein_coding chr9:139253352 chr9:139253357 . . 0 hm6A_associated_SNPs_11741 0 0 1 3 139253346 139253365 mRNA hsa-miR-1 GPSM1 miRanda miRanda
14034 chr9 139253357 139253357 1 + G A rs553580721 139253352 + 139253332 139253372 41 GAGGGAATGGCTGGGCATGAACTTCGACATTCCAAAACCCC GAGGGAATGGCTGGGCATGAACTTCAACATTCCAAAACCCC < 41bp 1 0.429257331756678 1 0.95175564289093 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 GPSM1 ENSG00000160360 UTR3 Human protein_coding chr9:139253352 chr9:139253357 . . 0 hm6A_associated_SNPs_11741 0 0 1 3 139253346 139253365 mRNA hsa-miR-206 GPSM1 miRanda miRanda
14034 chr9 139253357 139253357 1 + G A rs553580721 139253352 + 139253332 139253372 41 GAGGGAATGGCTGGGCATGAACTTCGACATTCCAAAACCCC GAGGGAATGGCTGGGCATGAACTTCAACATTCCAAAACCCC < 41bp 1 0.429257331756678 1 0.95175564289093 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 GPSM1 ENSG00000160360 UTR3 Human protein_coding chr9:139253352 chr9:139253357 . . 0 hm6A_associated_SNPs_11741 0 0 1 3 139253346 139253365 mRNA hsa-miR-613 GPSM1 miRanda miRanda
14034 chr9 139317369 139317369 1 + A G rs568110462 139317377 + 139317357 139317397 41 TCAACGTCTGTCACTTGTGGACTCACCCTTGGCTACACCCA TCAACGTCTGTCGCTTGTGGACTCACCCTTGGCTACACCCA < 41bp 1 0.684713828678055 1 0.977258205413818 experiment 0.630572342643889 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 PMPCA ENSG00000165688 intronic Human protein_coding chr9:139317377 chr9:139317369 . . 0 hm6A_associated_SNPs_11746 0 0 1 1 139317348 139317371 mRNA hsa-miR-542-3p PMPCA miRanda miRanda
14034 chr9 139317869 139317869 1 + T C rs1130635 139317873 + 139317853 139317893 41 GCGGTTTGCATTCTTTTGGAACTCAATGTGCCGATCAGTGG GCGGTTTGCATTCTTTCGGAACTCAATGTGCCGATCAGTGG < 41bp 1 0.618584587222592 1 0.985410332679749 experiment 0.762830825554817 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 PMPCA ENSG00000165688 UTR3 Human protein_coding chr9:139317873 chr9:139317869 . . 0 hm6A_associated_SNPs_11749 0 0 1 1 139317846 139317869 mRNA hsa-miR-186 PMPCA miRanda miRanda
14034 chr9 139618838 139618838 1 + C A rs945383 139618822 + 139618802 139618842 41 ATATATGCGGTATTTTAAAAACTGATTTTACAAAATCCAGC ATATATGCGGTATTTTAAAAACTGATTTTACAAAATACAGC < 41bp 1 0.178684403527758 1 0.963297545909882 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 37 FAM69B ENSG00000233016 ncRNA_intronic Human antisense chr9:139618822 chr9:139618838 . . 0 hm6A_associated_SNPs_11771 0 0 1 2 139618830 139618853 mRNA hsa-miR-181b FAM69B miRanda miRanda
14034 chr9 139618838 139618838 1 + C A rs945383 139618822 + 139618802 139618842 41 ATATATGCGGTATTTTAAAAACTGATTTTACAAAATCCAGC ATATATGCGGTATTTTAAAAACTGATTTTACAAAATACAGC < 41bp 1 0.178684403527758 1 0.963297545909882 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 37 FAM69B ENSG00000233016 ncRNA_intronic Human antisense chr9:139618822 chr9:139618838 . . 0 hm6A_associated_SNPs_11771 0 0 1 2 139618830 139618853 mRNA hsa-miR-181d FAM69B miRanda miRanda
14034 chr9 139977351 139977351 1 + C A rs7851870 139977348 + 139977328 139977368 41 CCATGCTTCCAGCCTGCAGAACACAGAATGAAACATGCTGG CCATGCTTCCAGCCTGCAGAACAAAGAATGAAACATGCTGG < 41bp 1 0.747539945348003 1 0.631806433200836 experiment 0.504920109303994 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 UAP1L1 ENSG00000197355 UTR3 Human protein_coding chr9:139977348 chr9:139977351 . . 0 hm6A_associated_SNPs_11798 0 0 0 1 139977348 139977369 mRNA hsa-miR-338-3p UAP1L1 miRanda miRanda
14034 chr9 139983445 139983445 1 + G A rs191443938 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGAGAACTTACCTGAAATTTCGTCAC < 41bp 1 0.793467366950489 1 0.881216406822205 experiment 0.413065266099023 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983445 synonymous SNV . 0 hm6A_associated_SNPs_11802 0 0 1 1 139983428 139983449 mRNA hsa-miR-216a MAN1B1 miRanda miRanda
14034 chr9 139983451 139983451 1 + G A rs140105878 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCATCAC < 41bp 1 0.78172846220695 1 0.835105836391449 experiment 0.436543075586099 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983451 synonymous SNV . 0 hm6A_associated_SNPs_11803 1 0 1 1 139983449 139983457 mRNA hsa-miR-599 MAN1B1 miRanda miRanda
14034 chr9 140112566 140112566 1 + C T rs540735423 140112582 + 140112562 140112602 41 GCGCCGCCTGGCCCTGCTGAACTGTAGCCACGGCCTGTGTG GCGCTGCCTGGCCCTGCTGAACTGTAGCCACGGCCTGTGTG < 41bp 1 0.647745100063793 1 0.958099961280823 experiment 0.704509799872415 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 5 NDOR1 ENSG00000188566;ENSG00000212864 intergenic Human other chr9:140112582 chr9:140112566 . . 0 hm6A_associated_SNPs_11817 0 0 0 1 140112561 140112581 mRNA hsa-miR-214 NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113769 140113793 mRNA hsa-miR-17 NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113769 140113793 mRNA hsa-miR-20a NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113769 140113793 mRNA hsa-miR-93 NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113769 140113793 mRNA hsa-miR-106a NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113772 140113793 mRNA hsa-miR-320a NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-302a NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-302b NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-302c NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-302d NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-372 NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113768 140113792 mRNA hsa-miR-373 NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113769 140113793 mRNA hsa-miR-20b NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113771 140113792 mRNA hsa-miR-520e NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-520a-3p NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113771 140113792 mRNA hsa-miR-520b NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-520c-3p NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113771 140113793 mRNA hsa-miR-519d NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113770 140113792 mRNA hsa-miR-520d-3p NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113772 140113793 mRNA hsa-miR-320b NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113774 140113793 mRNA hsa-miR-320c NDOR1 miRanda miRanda
14034 chr9 140113779 140113779 1 + C T rs372455079 140113766 + 140113746 140113786 41 GGCCCAGCGAGAGATGGAGGACTGATCCTGGAACGTGAAGC GGCCCAGCGAGAGATGGAGGACTGATCCTGGAATGTGAAGC < 41bp 1 0.506736526238799 1 0.938302099704742 experiment 0.986526947522402 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 NDOR1 ENSG00000212864 downstream Human protein_coding chr9:140113766 chr9:140113779 . . 0 hm6A_associated_SNPs_11823 0 0 1 21 140113775 140113793 mRNA hsa-miR-320d NDOR1 miRanda miRanda
14034 chr9 141071438 141071438 1 + A G rs7869352 141071432 + 141071412 141071452 41 GGTTCCCCGACAACGTAAAAACAGCCATCTGTGACATCCCA GGTTCCCCGACAACGTAAAAACAGCCGTCTGTGACATCCCA < 41bp 1 0.109277667425096 1 0.996337234973907 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 TUBBP5 ENSG00000159247 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:141071432 chr9:141071438 . . 0 hm6A_associated_SNPs_11854 0 0 0 2 141071427 141071446 mRNA hsa-miR-27a TUBBP5 miRanda miRanda
14034 chr9 141071438 141071438 1 + A G rs7869352 141071432 + 141071412 141071452 41 GGTTCCCCGACAACGTAAAAACAGCCATCTGTGACATCCCA GGTTCCCCGACAACGTAAAAACAGCCGTCTGTGACATCCCA < 41bp 1 0.109277667425096 1 0.996337234973907 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 TUBBP5 ENSG00000159247 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:141071432 chr9:141071438 . . 0 hm6A_associated_SNPs_11854 0 0 0 2 141071427 141071446 mRNA hsa-miR-27b TUBBP5 miRanda miRanda
14034 chr9 141071518 141071518 1 + G A rs7852170 141071509 + 141071489 141071529 41 AATAATGCGGCCATCCAGGAACTCTTCACGTGTGTCTCAGA AATAATGCGGCCATCCAGGAACTCTTCACATGTGTCTCAGA < 41bp 1 0.124838695719983 1 0.994668424129486 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 TUBBP5 ENSG00000159247 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:141071509 chr9:141071518 . . 0 hm6A_associated_SNPs_11856 0 0 0 1 141071502 141071523 mRNA hsa-miR-128 TUBBP5 miRanda miRanda
14034 chr10 3178881 3178881 1 + C A rs1053000 3178866 + 3178846 3178886 41 ACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGA ACTTTATGCACGTATTATTGACATTAATACCTAATAGGCGA < 41bp 1 0.546692443103769 1 0.954859018325806 experiment 0.906615113792463 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 PFKP ENSG00000067057 UTR3 Human protein_coding chr10:3178866 chr10:3178881 . . 0 hm6A_associated_SNPs_11884 0 0 1 1 3178873 3178895 mRNA hsa-miR-183 PFKP miRanda miRanda
14034 chr10 5979497 5979497 1 + A G rs2387091 5979511 + 5979491 5979531 41 AAAAAAATTTATGTATTTAAACTTTTATTACAAGATTTCAA AAAAAAGTTTATGTATTTAAACTTTTATTACAAGATTTCAA < 41bp 1 0.109059302900153 1 0.897055387496948 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 FBXO18 ENSG00000232807 ncRNA_intronic Human antisense chr10:5979511 chr10:5979497 . . 0 hm6A_associated_SNPs_11904 0 0 0 2 5979485 5979505 mRNA hsa-miR-376c FBXO18 miRanda miRanda
14034 chr10 5979497 5979497 1 + A G rs2387091 5979511 + 5979491 5979531 41 AAAAAAATTTATGTATTTAAACTTTTATTACAAGATTTCAA AAAAAAGTTTATGTATTTAAACTTTTATTACAAGATTTCAA < 41bp 1 0.109059302900153 1 0.897055387496948 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 FBXO18 ENSG00000232807 ncRNA_intronic Human antisense chr10:5979511 chr10:5979497 . . 0 hm6A_associated_SNPs_11904 0 0 0 2 5979480 5979500 mRNA hsa-miR-590-3p FBXO18 miRanda miRanda
14034 chr10 6276035 6276035 1 + A G rs35781052 6276038 + 6276018 6276058 41 TTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATGGAAA TTCCCTTCATGGCGTCTGTGACACTTTTGTGGTGATGGAAA < 41bp 1 0.645864486432235 1 0.811915516853333 experiment 0.708271027135531 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 PFKFB3 ENSG00000170525 UTR3 Human protein_coding chr10:6276038 chr10:6276035 . . 0 hm6A_associated_SNPs_11914 0 0 1 1 6276032 6276053 mRNA hsa-miR-197 PFKFB3 miRanda miRanda
14034 chr10 11912660 11912660 1 + T A rs192049291 11912658 + 11912638 11912678 41 TTGTCTCCCTTTTCCCAAGAACTGAGAGAGAGAGAATAACC TTGTCTCCCTTTTCCCAAGAACAGAGAGAGAGAGAATAACC < 41bp 1 0.694439386429465 1 0.939387917518616 experiment 0.61112122714107 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 PROSER2-AS1 ENSG00000225778 ncRNA_intronic Human antisense chr10:11912658 chr10:11912660 . . 0 hm6A_associated_SNPs_11933 0 0 1 1 11912659 11912680 mRNA hsa-miR-154 C10orf47 miRanda miRanda
14034 chr10 12204213 12204213 1 + T G rs545357873 12204232 + 12204212 12204252 41 GTAGCTAAACAGCTGAAAGAACAGCAGATGGTAATGAGGGG GGAGCTAAACAGCTGAAAGAACAGCAGATGGTAATGAGGGG < 41bp 1 0.398788793291958 1 0.250164031982422 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 2 SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12204232 chr10:12204213 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_11938 0 0 0 2 12204212 12204217 mRNA hsa-miR-221 SEC61A2 miRanda miRanda
14034 chr10 12204213 12204213 1 + T G rs545357873 12204232 + 12204212 12204252 41 GTAGCTAAACAGCTGAAAGAACAGCAGATGGTAATGAGGGG GGAGCTAAACAGCTGAAAGAACAGCAGATGGTAATGAGGGG < 41bp 1 0.398788793291958 1 0.250164031982422 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 2 SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12204232 chr10:12204213 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_11938 0 0 0 2 12204212 12204217 mRNA hsa-miR-222 SEC61A2 miRanda miRanda
14034 chr10 12875848 12875848 1 + T G rs140557319 12875866 + 12875846 12875886 41 TGTCTACCCACACTCTGCGAACTTTGCCTTTTCCTTAAACA TGGCTACCCACACTCTGCGAACTTTGCCTTTTCCTTAAACA < 41bp 1 0.314666779479523 1 0.94320821762085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 CAMK1D ENSG00000183049 UTR3 Human protein_coding chr10:12875866 chr10:12875848 . . 0 hm6A_associated_SNPs_11942 0 0 1 1 12875830 12875854 mRNA hsa-miR-379 LOC283070 miRanda miRanda
14034 chr10 13252437 13252437 1 + G A rs573942510 13252422 + 13252402 13252442 41 GGTTTTCCAAATATCATTTGACCTAAGTGAATGTTGATACT GGTTTTCCAAATATCATTTGACCTAAGTGAATGTTAATACT < 41bp 1 0.076625404303296 1 0.000957131385803223 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 MCM10 ENSG00000065328 UTR3 Human protein_coding chr10:13252422 chr10:13252437 . . 0 hm6A_associated_SNPs_11957 0 0 1 1 13252416 13252437 mRNA hsa-miR-543 MCM10 miRanda miRanda
14034 chr10 13252764 13252764 1 + A G rs540776499 13252761 + 13252741 13252781 41 TTTCTTTTTAATTTTTTCTAACAAAGAAAAGAATAAAGTAT TTTCTTTTTAATTTTTTCTAACAGAGAAAAGAATAAAGTAT < 41bp 1 0.0548475502535284 1 0.0462735891342163 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 MCM10 ENSG00000065328 UTR3 Human protein_coding chr10:13252761 chr10:13252764 . . 0 hm6A_associated_SNPs_11958 0 0 1 1 13252743 13252764 mRNA hsa-miR-653 MCM10 miRanda miRanda
14034 chr10 13252914 13252914 1 + G A rs7075516 13252898 + 13252878 13252918 41 ATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGT ATGAAATAGGTCACAACAGAACTTGAACACCAGGTTAGTGT < 41bp 1 0.223116967596179 1 0.011957049369812 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 MCM10 ENSG00000065328 UTR3 Human protein_coding chr10:13252898 chr10:13252914 . . 0 hm6A_associated_SNPs_11959 0 0 1 1 13252893 13252914 mRNA hsa-miR-490-3p MCM10 miRanda miRanda
14034 chr10 13672411 13672411 1 + A G rs113627543 13672395 + 13672375 13672415 41 CTTAGGGAAGCAGGCTGTGGACTTCTGGAATTACCAACAGG CTTAGGGAAGCAGGCTGTGGACTTCTGGAATTACCAGCAGG < 41bp 1 0.797704802017133 1 0.968862652778625 experiment 0.404590395965734 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 37 PRPF18 ENSG00000165630;ENSG00000239665 UTR3 Human other chr10:13672395 chr10:13672411 . . 0 hm6A_associated_SNPs_11960 0 0 1 1 13672391 13672415 mRNA hsa-miR-9 PRPF18 miRanda miRanda
14034 chr10 14944851 14944851 1 + G C rs116910335 14944845 + 14944825 14944865 41 TTAAGCTGATAATGTAATTAACAACTGCTGAGAGATCAAAG TTAAGCTGATAATGTAATTAACAACTCCTGAGAGATCAAAG < 41bp 1 0.500503697801799 1 0.541581988334656 experiment 0.998992604396403 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 SUV39H2 ENSG00000152455 UTR3 Human protein_coding chr10:14944845 chr10:14944851 . . 0 hm6A_associated_SNPs_11969 0 0 1 2 14944835 14944856 mRNA hsa-miR-27a SUV39H2 miRanda miRanda
14034 chr10 14944851 14944851 1 + G C rs116910335 14944845 + 14944825 14944865 41 TTAAGCTGATAATGTAATTAACAACTGCTGAGAGATCAAAG TTAAGCTGATAATGTAATTAACAACTCCTGAGAGATCAAAG < 41bp 1 0.500503697801799 1 0.541581988334656 experiment 0.998992604396403 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 SUV39H2 ENSG00000152455 UTR3 Human protein_coding chr10:14944845 chr10:14944851 . . 0 hm6A_associated_SNPs_11969 0 0 1 2 14944835 14944856 mRNA hsa-miR-27b SUV39H2 miRanda miRanda
14034 chr10 16554205 16554205 1 + A G rs45600437 16554190 + 16554170 16554210 41 GGTCAGATCTATTGGAAATGACAGCCCGATACTTGAGCCTC GGTCAGATCTATTGGAAATGACAGCCCGATACTTGGGCCTC < 41bp 1 0.154617180689816 1 0.00481718778610229 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 PTER ENSG00000165983 UTR3 Human protein_coding chr10:16554190 chr10:16554205 . . 0 hm6A_associated_SNPs_11971 0 0 1 5 16554186 16554206 mRNA hsa-miR-26a PTER miRanda miRanda
14034 chr10 16554205 16554205 1 + A G rs45600437 16554190 + 16554170 16554210 41 GGTCAGATCTATTGGAAATGACAGCCCGATACTTGAGCCTC GGTCAGATCTATTGGAAATGACAGCCCGATACTTGGGCCTC < 41bp 1 0.154617180689816 1 0.00481718778610229 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 PTER ENSG00000165983 UTR3 Human protein_coding chr10:16554190 chr10:16554205 . . 0 hm6A_associated_SNPs_11971 0 0 1 5 16554188 16554206 mRNA hsa-miR-26b PTER miRanda miRanda
14034 chr10 16554205 16554205 1 + A G rs45600437 16554190 + 16554170 16554210 41 GGTCAGATCTATTGGAAATGACAGCCCGATACTTGAGCCTC GGTCAGATCTATTGGAAATGACAGCCCGATACTTGGGCCTC < 41bp 1 0.154617180689816 1 0.00481718778610229 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 PTER ENSG00000165983 UTR3 Human protein_coding chr10:16554190 chr10:16554205 . . 0 hm6A_associated_SNPs_11971 0 0 1 5 16554194 16554213 mRNA hsa-miR-28-5p PTER miRanda miRanda
14034 chr10 16554205 16554205 1 + A G rs45600437 16554190 + 16554170 16554210 41 GGTCAGATCTATTGGAAATGACAGCCCGATACTTGAGCCTC GGTCAGATCTATTGGAAATGACAGCCCGATACTTGGGCCTC < 41bp 1 0.154617180689816 1 0.00481718778610229 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 PTER ENSG00000165983 UTR3 Human protein_coding chr10:16554190 chr10:16554205 . . 0 hm6A_associated_SNPs_11971 0 0 1 5 16554189 16554213 mRNA hsa-miR-708 PTER miRanda miRanda
14034 chr10 16554205 16554205 1 + A G rs45600437 16554190 + 16554170 16554210 41 GGTCAGATCTATTGGAAATGACAGCCCGATACTTGAGCCTC GGTCAGATCTATTGGAAATGACAGCCCGATACTTGGGCCTC < 41bp 1 0.154617180689816 1 0.00481718778610229 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 PTER ENSG00000165983 UTR3 Human protein_coding chr10:16554190 chr10:16554205 . . 0 hm6A_associated_SNPs_11971 0 0 1 5 16554192 16554206 mRNA hsa-miR-1297 PTER miRanda miRanda
14034 chr10 17279325 17279325 1 + C T rs12667 17279340 + 17279320 17279360 41 GAAATCCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT GAAATTCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT < 41bp 1 0.728849666651261 1 0.823867797851562 experiment 0.542300666697478 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 6 VIM ENSG00000026025 UTR3 Human protein_coding chr10:17279340 chr10:17279325 . . 0 hm6A_associated_SNPs_11972 0 0 1 5 17279308 17279329 mRNA hsa-miR-135a VIM miRanda miRanda
14034 chr10 17279325 17279325 1 + C T rs12667 17279340 + 17279320 17279360 41 GAAATCCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT GAAATTCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT < 41bp 1 0.728849666651261 1 0.823867797851562 experiment 0.542300666697478 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 6 VIM ENSG00000026025 UTR3 Human protein_coding chr10:17279340 chr10:17279325 . . 0 hm6A_associated_SNPs_11972 0 0 1 5 17279310 17279332 mRNA hsa-miR-190 VIM miRanda miRanda
14034 chr10 17279325 17279325 1 + C T rs12667 17279340 + 17279320 17279360 41 GAAATCCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT GAAATTCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT < 41bp 1 0.728849666651261 1 0.823867797851562 experiment 0.542300666697478 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 6 VIM ENSG00000026025 UTR3 Human protein_coding chr10:17279340 chr10:17279325 . . 0 hm6A_associated_SNPs_11972 0 0 1 5 17279308 17279329 mRNA hsa-miR-135b VIM miRanda miRanda
14034 chr10 17279325 17279325 1 + C T rs12667 17279340 + 17279320 17279360 41 GAAATCCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT GAAATTCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT < 41bp 1 0.728849666651261 1 0.823867797851562 experiment 0.542300666697478 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 6 VIM ENSG00000026025 UTR3 Human protein_coding chr10:17279340 chr10:17279325 . . 0 hm6A_associated_SNPs_11972 0 0 1 5 17279306 17279327 mRNA hsa-miR-876-5p VIM miRanda miRanda
14034 chr10 17279325 17279325 1 + C T rs12667 17279340 + 17279320 17279360 41 GAAATCCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT GAAATTCATATCTTAAAGAAACAGCTTTCAAGTGCCTTTCT < 41bp 1 0.728849666651261 1 0.823867797851562 experiment 0.542300666697478 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 6 VIM ENSG00000026025 UTR3 Human protein_coding chr10:17279340 chr10:17279325 . . 0 hm6A_associated_SNPs_11972 0 0 1 5 17279312 17279332 mRNA hsa-miR-190b VIM miRanda miRanda
14034 chr10 17279517 17279517 1 + C T rs3249 17279524 + 17279504 17279544 41 GTATTTTGAATACCATTAAAACTGCTTTTTTTTTTCCAGCA GTATTTTGAATACTATTAAAACTGCTTTTTTTTTTCCAGCA < 41bp 1 0.155052803726099 1 0.3865567445755 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 VIM ENSG00000026025 UTR3 Human protein_coding chr10:17279524 chr10:17279517 . . 0 hm6A_associated_SNPs_11973 0 0 1 1 17279500 17279522 mRNA hsa-miR-155 VIM miRanda miRanda
14034 chr10 17757862 17757862 1 + T C rs17141568 17757852 + 17757832 17757872 41 GTATTTTAAATATGTCTTTAACACATTGTATCCTTTAATTC GTATTTTAAATATGTCTTTAACACATTGTACCCTTTAATTC < 41bp 1 0.119747622325035 1 0.1862413585186 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 STAM ENSG00000136738 UTR3 Human protein_coding chr10:17757852 chr10:17757862 . . 0 hm6A_associated_SNPs_11977 0 0 1 3 17757855 17757876 mRNA hsa-miR-186 STAM miRanda miRanda
14034 chr10 17757862 17757862 1 + T C rs17141568 17757852 + 17757832 17757872 41 GTATTTTAAATATGTCTTTAACACATTGTATCCTTTAATTC GTATTTTAAATATGTCTTTAACACATTGTACCCTTTAATTC < 41bp 1 0.119747622325035 1 0.1862413585186 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 STAM ENSG00000136738 UTR3 Human protein_coding chr10:17757852 chr10:17757862 . . 0 hm6A_associated_SNPs_11977 0 0 1 3 17757842 17757863 mRNA hsa-miR-381 STAM miRanda miRanda
14034 chr10 17757862 17757862 1 + T C rs17141568 17757852 + 17757832 17757872 41 GTATTTTAAATATGTCTTTAACACATTGTATCCTTTAATTC GTATTTTAAATATGTCTTTAACACATTGTACCCTTTAATTC < 41bp 1 0.119747622325035 1 0.1862413585186 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 STAM ENSG00000136738 UTR3 Human protein_coding chr10:17757852 chr10:17757862 . . 0 hm6A_associated_SNPs_11977 0 0 1 3 17757842 17757863 mRNA hsa-miR-300 STAM miRanda miRanda
14034 chr10 18965488 18965488 1 + C T rs148636273 18965469 + 18965449 18965489 41 TCCTTAAATTAAGAGGAAAGACAAGTGTCGTATTTCGATCC TCCTTAAATTAAGAGGAAAGACAAGTGTCGTATTTCGATTC < 41bp 1 0.358893667574963 1 0.182371348142624 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 40 ARL5B ENSG00000165997 UTR3 Human protein_coding chr10:18965469 chr10:18965488 . . 0 hm6A_associated_SNPs_11980 0 0 1 1 18965488 18965509 mRNA hsa-miR-377 ARL5B miRanda miRanda
14034 chr10 18966142 18966142 1 + G A rs41282212 18966127 + 18966107 18966147 41 GTATTTGTTCTTATGAAATGACTATCTGCCTTCTTGTATCT GTATTTGTTCTTATGAAATGACTATCTGCCTTCTTATATCT < 41bp 1 0.218615107855155 1 0.158497750759125 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 ARL5B ENSG00000165997 UTR3 Human protein_coding chr10:18966127 chr10:18966142 . . 0 hm6A_associated_SNPs_11981 0 0 1 2 18966123 18966146 mRNA hsa-miR-381 ARL5B miRanda miRanda
14034 chr10 18966142 18966142 1 + G A rs41282212 18966127 + 18966107 18966147 41 GTATTTGTTCTTATGAAATGACTATCTGCCTTCTTGTATCT GTATTTGTTCTTATGAAATGACTATCTGCCTTCTTATATCT < 41bp 1 0.218615107855155 1 0.158497750759125 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 ARL5B ENSG00000165997 UTR3 Human protein_coding chr10:18966127 chr10:18966142 . . 0 hm6A_associated_SNPs_11981 0 0 1 2 18966123 18966146 mRNA hsa-miR-300 ARL5B miRanda miRanda
14034 chr10 22030929 22030929 1 + A G rs116484775 22030912 + 22030892 22030932 41 GTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAA GTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTGGAA < 41bp 1 0.655325626637696 1 0.941310465335846 experiment 0.689348746724607 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 MLLT10 ENSG00000078403 UTR3 Human protein_coding chr10:22030912 chr10:22030929 . . 0 hm6A_associated_SNPs_11987 0 0 1 1 22030929 22030949 mRNA hsa-miR-214 MLLT10 miRanda miRanda
14034 chr10 22030929 22030929 1 + A G rs116484775 22030923 + 22030903 22030943 41 GAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATCC GAAAAGTTGACACCTGAGAAACATCTGGAAATTGCCTATCC < 41bp 1 0.651996866964335 1 0.967084884643555 experiment 0.696006266071329 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 MLLT10 ENSG00000078403 UTR3 Human protein_coding chr10:22030923 chr10:22030929 . . 0 hm6A_associated_SNPs_11988 0 0 1 1 22030929 22030949 mRNA hsa-miR-214 MLLT10 miRanda miRanda
14034 chr10 22031436 22031436 1 + G A rs41304605 22031439 + 22031419 22031459 41 TATATAGCACATCACCTGGGACTTGGCAATCTTTGTTAAAA TATATAGCACATCACCTAGGACTTGGCAATCTTTGTTAAAA < 41bp 1 0.401896812170497 1 0.832421660423279 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 18 MLLT10 ENSG00000078403 UTR3 Human protein_coding chr10:22031439 chr10:22031436 . . 0 hm6A_associated_SNPs_11989 0 0 1 1 22031416 22031437 mRNA hsa-miR-125a-3p MLLT10 miRanda miRanda
14034 chr10 22619304 22619304 1 + A C rs7080076 22619300 + 22619280 22619320 41 GACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTA GACCTTTGCAGATACCCATAACCTCTGTTGAGCCTTGCTTA < 41bp 1 0.109257598629787 1 0.864471077919006 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 BMI1;COMMD3-BMI1 ENSG00000168283 UTR3 Human protein_coding chr10:22619300 chr10:22619304 . . 0 hm6A_associated_SNPs_11991 0 0 1 1 22619282 22619304 mRNA hsa-miR-154 BMI1 miRanda miRanda
14034 chr10 23410835 23410835 1 + A G rs117545578 23410829 + 23410809 23410849 41 ACCATTCTACCCACAAATAAACTGCAATAGGACTTGGTTAG ACCATTCTACCCACAAATAAACTGCAGTAGGACTTGGTTAG < 41bp 1 0.26394174140579 1 0.194905251264572 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MSRB2 ENSG00000148450 UTR3 Human protein_coding chr10:23410829 chr10:23410835 . . 0 hm6A_associated_SNPs_11993 0 0 1 1 23410835 23410856 mRNA hsa-miR-203 MSRB2 miRanda miRanda
14034 chr10 23730901 23730901 1 + G A rs191601127 23730888 + 23730868 23730908 41 TGATGTAGAAATGTCTGTAAACAGAGCTTGTATGGTTTGCT TGATGTAGAAATGTCTGTAAACAGAGCTTGTATAGTTTGCT < 41bp 1 0.144043559310892 1 0.0326186716556549 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 OTUD1 ENSG00000165312 UTR3 Human protein_coding chr10:23730888 chr10:23730901 . . 0 hm6A_associated_SNPs_11996 0 0 1 3 23730880 23730901 mRNA hsa-miR-381 OTUD1 miRanda miRanda
14034 chr10 23730901 23730901 1 + G A rs191601127 23730888 + 23730868 23730908 41 TGATGTAGAAATGTCTGTAAACAGAGCTTGTATGGTTTGCT TGATGTAGAAATGTCTGTAAACAGAGCTTGTATAGTTTGCT < 41bp 1 0.144043559310892 1 0.0326186716556549 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 OTUD1 ENSG00000165312 UTR3 Human protein_coding chr10:23730888 chr10:23730901 . . 0 hm6A_associated_SNPs_11996 0 0 1 3 23730899 23730926 mRNA hsa-miR-494 OTUD1 miRanda miRanda
14034 chr10 23730901 23730901 1 + G A rs191601127 23730888 + 23730868 23730908 41 TGATGTAGAAATGTCTGTAAACAGAGCTTGTATGGTTTGCT TGATGTAGAAATGTCTGTAAACAGAGCTTGTATAGTTTGCT < 41bp 1 0.144043559310892 1 0.0326186716556549 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 OTUD1 ENSG00000165312 UTR3 Human protein_coding chr10:23730888 chr10:23730901 . . 0 hm6A_associated_SNPs_11996 0 0 1 3 23730880 23730901 mRNA hsa-miR-300 OTUD1 miRanda miRanda
14034 chr10 27035417 27035417 1 + C A rs115460991 27035402 + 27035382 27035422 41 GTACTCACAAGAGATAAATGACAACTCTTTCTGTTCTTTCT GTACTCACAAGAGATAAATGACAACTCTTTCTGTTATTTCT < 41bp 1 0.658615815975731 1 0.810659945011139 experiment 0.682768368048537 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 36 PDSS1 ENSG00000148459 UTR3 Human protein_coding chr10:27035402 chr10:27035417 . . 0 hm6A_associated_SNPs_12000 0 0 1 1 27035411 27035430 mRNA hsa-miR-22 PDSS1 miRanda miRanda
14034 chr10 27475494 27475494 1 + T C rs10764686 27475509 + 27475489 27475529 41 AGCCTTGTGTTATAGAATGAACTTGCATAATTATATACTCC AGCCTCGTGTTATAGAATGAACTTGCATAATTATATACTCC < 41bp 1 0.565114088372457 1 0.87566602230072 experiment 0.869771823255086 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 MASTL ENSG00000120539 UTR3 Human protein_coding chr10:27475509 chr10:27475494 . . 0 hm6A_associated_SNPs_12002 2 0 1 1 27475482 27475504 mRNA hsa-miR-410 MASTL miRanda miRanda
14034 chr10 27475525 27475525 1 + A T rs570139166 27475509 + 27475489 27475529 41 AGCCTTGTGTTATAGAATGAACTTGCATAATTATATACTCC AGCCTTGTGTTATAGAATGAACTTGCATAATTATATTCTCC < 41bp 1 0.558890727276785 1 0.815007865428925 experiment 0.88221854544643 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 MASTL ENSG00000120539 UTR3 Human protein_coding chr10:27475509 chr10:27475525 . . 0 hm6A_associated_SNPs_12003 0 0 1 2 27475505 27475525 mRNA hsa-miR-410 MASTL miRanda miRanda
14034 chr10 27475525 27475525 1 + A T rs570139166 27475509 + 27475489 27475529 41 AGCCTTGTGTTATAGAATGAACTTGCATAATTATATACTCC AGCCTTGTGTTATAGAATGAACTTGCATAATTATATTCTCC < 41bp 1 0.558890727276785 1 0.815007865428925 experiment 0.88221854544643 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 MASTL ENSG00000120539 UTR3 Human protein_coding chr10:27475509 chr10:27475525 . . 0 hm6A_associated_SNPs_12003 0 0 1 2 27475508 27475529 mRNA hsa-miR-496 MASTL miRanda miRanda
14034 chr10 28971506 28971506 1 + C G rs113869417 28971497 + 28971477 28971517 41 CTGAAGGATTATTTGCACAGACTTAAATACAGTTAAATGTG CTGAAGGATTATTTGCACAGACTTAAATAGAGTTAAATGTG < 41bp 1 0.661607445792564 1 0.958531975746155 experiment 0.676785108414872 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 BAMBI ENSG00000095739 UTR3 Human protein_coding chr10:28971497 chr10:28971506 . . 0 hm6A_associated_SNPs_12011 0 0 1 2 28971499 28971519 mRNA hsa-miR-23a BAMBI miRanda miRanda
14034 chr10 28971506 28971506 1 + C G rs113869417 28971497 + 28971477 28971517 41 CTGAAGGATTATTTGCACAGACTTAAATACAGTTAAATGTG CTGAAGGATTATTTGCACAGACTTAAATAGAGTTAAATGTG < 41bp 1 0.661607445792564 1 0.958531975746155 experiment 0.676785108414872 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 BAMBI ENSG00000095739 UTR3 Human protein_coding chr10:28971497 chr10:28971506 . . 0 hm6A_associated_SNPs_12011 0 0 1 2 28971498 28971519 mRNA hsa-miR-23b BAMBI miRanda miRanda
14034 chr10 28971551 28971551 1 + A T rs144134867 28971554 + 28971534 28971574 41 TTATAAAAAGCAAAGAGAAGACTTTGTACACACTGTCACCA TTATAAAAAGCAAAGAGTAGACTTTGTACACACTGTCACCA < 41bp 1 0.522399028887996 1 0.960993230342865 experiment 0.955201942224007 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 BAMBI ENSG00000095739 UTR3 Human protein_coding chr10:28971554 chr10:28971551 . . 0 hm6A_associated_SNPs_12012 0 0 1 1 28971551 28971573 mRNA hsa-miR-542-3p BAMBI miRanda miRanda
14034 chr10 31816618 31816618 1 + A G rs558749472 31816636 + 31816616 31816656 41 TTATAATTTTTTATTGGTAAACATATGCTAAATCCGCTTCA TTGTAATTTTTTATTGGTAAACATATGCTAAATCCGCTTCA < 41bp 1 0.418477531083198 1 0.0857404470443726 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 ZEB1 ENSG00000148516 UTR3 Human protein_coding chr10:31816636 chr10:31816618 . . 0 hm6A_associated_SNPs_12015 0 0 1 1 31816600 31816621 mRNA hsa-miR-340 ZEB1 miRanda miRanda
14034 chr10 31816881 31816881 1 + G A rs543300078 31816862 + 31816842 31816882 41 AGAAAGCAGCTGATAGAAGAACTGAAGTTTCTTACTCACGT AGAAAGCAGCTGATAGAAGAACTGAAGTTTCTTACTCACAT < 41bp 1 0.390771358199685 1 0.766337811946869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 ZEB1 ENSG00000148516 UTR3 Human protein_coding chr10:31816862 chr10:31816881 . . 0 hm6A_associated_SNPs_12016 0 0 1 1 31816875 31816897 mRNA hsa-miR-136 ZEB1 miRanda miRanda
14034 chr10 31817749 31817749 1 + T A rs118189529 31817757 + 31817737 31817777 41 AACATTTATACTTGCCTTGGACTGTAGAACAGAACTTAAAT AACATTTATACTAGCCTTGGACTGTAGAACAGAACTTAAAT < 41bp 1 0.467813392308469 1 0.916805326938629 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 ZEB1 ENSG00000148516 UTR3 Human protein_coding chr10:31817757 chr10:31817749 . . 0 hm6A_associated_SNPs_12017 0 0 1 1 31817743 31817764 mRNA hsa-miR-139-5p ZEB1 miRanda miRanda
14034 chr10 35500694 35500694 1 + C A rs143874488 35500693 + 35500673 35500713 41 AGCTTATAGAGGAACTTGAAACCTTGAAAGACATTTGTTCT AGCTTATAGAGGAACTTGAAAACTTGAAAGACATTTGTTCT Direct Loss 1 0.781817870300859 1 0.995881617069244 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 CREM ENSG00000095794 CDS Human protein_coding chr10:35500693 chr10:35500694 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_12021 0 0 0 2 35500694 35500715 mRNA hsa-miR-146a CREM miRanda miRanda
14034 chr10 35500694 35500694 1 + C A rs143874488 35500693 + 35500673 35500713 41 AGCTTATAGAGGAACTTGAAACCTTGAAAGACATTTGTTCT AGCTTATAGAGGAACTTGAAAACTTGAAAGACATTTGTTCT Direct Loss 1 0.781817870300859 1 0.995881617069244 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 CREM ENSG00000095794 CDS Human protein_coding chr10:35500693 chr10:35500694 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_12021 0 0 0 2 35500694 35500715 mRNA hsa-miR-146b-5p CREM miRanda miRanda
14034 chr10 38411874 38411874 1 + T C rs76186087 38411892 + 38411872 38411912 41 ACTACAAAGAAATACTTGAGACTGAGTAATTTATAAAGAAG ACCACAAAGAAATACTTGAGACTGAGTAATTTATAAAGAAG < 41bp 1 0.272446982589527 1 0.216761618852615 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF37A ENSG00000075407 UTR3 Human protein_coding chr10:38411892 chr10:38411874 . . 0 hm6A_associated_SNPs_12028 0 0 0 2 38411870 38411891 mRNA hsa-miR-26a ZNF37A miRanda miRanda
14034 chr10 38411874 38411874 1 + T C rs76186087 38411892 + 38411872 38411912 41 ACTACAAAGAAATACTTGAGACTGAGTAATTTATAAAGAAG ACCACAAAGAAATACTTGAGACTGAGTAATTTATAAAGAAG < 41bp 1 0.272446982589527 1 0.216761618852615 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF37A ENSG00000075407 UTR3 Human protein_coding chr10:38411892 chr10:38411874 . . 0 hm6A_associated_SNPs_12028 0 0 0 2 38411871 38411891 mRNA hsa-miR-26b ZNF37A miRanda miRanda
14034 chr10 43625065 43625065 1 + G A rs149252070 43625076 + 43625056 43625096 41 AAAAGAGTCGGATTACCAAAACACTGCCTGCTCTTCAGACT AAAAGAGTCAGATTACCAAAACACTGCCTGCTCTTCAGACT < 41bp 1 0.745429602918421 1 0.839420974254608 experiment 0.509140794163159 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 RET ENSG00000165731 UTR3 Human protein_coding chr10:43625076 chr10:43625065 . . 0 hm6A_associated_SNPs_12035 4 0 0 4 43625064 43625084 mRNA hsa-miR-34a RET miRanda miRanda
14034 chr10 43625065 43625065 1 + G A rs149252070 43625076 + 43625056 43625096 41 AAAAGAGTCGGATTACCAAAACACTGCCTGCTCTTCAGACT AAAAGAGTCAGATTACCAAAACACTGCCTGCTCTTCAGACT < 41bp 1 0.745429602918421 1 0.839420974254608 experiment 0.509140794163159 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 RET ENSG00000165731 UTR3 Human protein_coding chr10:43625076 chr10:43625065 . . 0 hm6A_associated_SNPs_12035 4 0 0 4 43625064 43625084 mRNA hsa-miR-34c-5p RET miRanda miRanda
14034 chr10 43625065 43625065 1 + G A rs149252070 43625076 + 43625056 43625096 41 AAAAGAGTCGGATTACCAAAACACTGCCTGCTCTTCAGACT AAAAGAGTCAGATTACCAAAACACTGCCTGCTCTTCAGACT < 41bp 1 0.745429602918421 1 0.839420974254608 experiment 0.509140794163159 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 RET ENSG00000165731 UTR3 Human protein_coding chr10:43625076 chr10:43625065 . . 0 hm6A_associated_SNPs_12035 4 0 0 4 43625062 43625084 mRNA hsa-miR-449a RET miRanda miRanda
14034 chr10 43625065 43625065 1 + G A rs149252070 43625076 + 43625056 43625096 41 AAAAGAGTCGGATTACCAAAACACTGCCTGCTCTTCAGACT AAAAGAGTCAGATTACCAAAACACTGCCTGCTCTTCAGACT < 41bp 1 0.745429602918421 1 0.839420974254608 experiment 0.509140794163159 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 RET ENSG00000165731 UTR3 Human protein_coding chr10:43625076 chr10:43625065 . . 0 hm6A_associated_SNPs_12035 4 0 0 4 43625062 43625084 mRNA hsa-miR-449b RET miRanda miRanda
14034 chr10 43977616 43977616 1 + A G rs184864651 43977611 + 43977591 43977631 41 TACAGAGGAGAGAAAACTTGACTGTAGTAGACATTTGGAAG TACAGAGGAGAGAAAACTTGACTGTGGTAGACATTTGGAAG < 41bp 1 0.0760514261249495 1 0.989557921886444 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 ZNF487 ENSG00000243660 UTR3 Human protein_coding chr10:43977611 chr10:43977616 . . 0 hm6A_associated_SNPs_12040 0 0 0 1 43977597 43977618 mRNA hsa-miR-139-5p ZNF487 miRanda miRanda
14034 chr10 45500247 45500247 1 + C T rs116731114 45500246 + 45500226 45500266 41 TAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTC TAGAGTTCTTTGTGATGGTAATTGCTGTGTCGTTTGTTTTC Direct Loss 1 0.106117310066374 1 0.787567734718323 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 ZNF22 ENSG00000226937 ncRNA_intronic Human transcribed_processed_pseudogene chr10:45500246 chr10:45500247 . . 0 hm6A_associated_SNPs_12048 0 0 1 1 45500242 45500264 mRNA hsa-miR-495 ZNF22 miRanda miRanda
14034 chr10 45500589 45500589 1 + A G rs77306420 45500587 + 45500567 45500607 41 TGTTTTAAGGAGTCCGGCAAACATGTTTCTTCACTTCCATG TGTTTTAAGGAGTCCGGCAAACGTGTTTCTTCACTTCCATG Direct Loss 1 0.181428898250787 1 0.289593309164047 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 ZNF22 ENSG00000226937 ncRNA_intronic Human transcribed_processed_pseudogene chr10:45500587 chr10:45500589 . . 0 hm6A_associated_SNPs_12051 0 0 1 1 45500575 45500596 mRNA hsa-miR-494 ZNF22 miRanda miRanda
14034 chr10 45500725 45500725 1 + A G rs115031441 45500732 + 45500712 45500752 41 CGGTTTCTGCTGTATTAATGACAATTATTCATGAAAATAAA CGGTTTCTGCTGTGTTAATGACAATTATTCATGAAAATAAA < 41bp 1 0.297962287246003 1 0.0854953527450562 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 ZNF22 ENSG00000226937 ncRNA_intronic Human transcribed_processed_pseudogene chr10:45500732 chr10:45500725 . . 0 hm6A_associated_SNPs_12052 0 0 1 2 45500717 45500738 mRNA hsa-miR-219-5p ZNF22 miRanda miRanda
14034 chr10 45500725 45500725 1 + A G rs115031441 45500732 + 45500712 45500752 41 CGGTTTCTGCTGTATTAATGACAATTATTCATGAAAATAAA CGGTTTCTGCTGTGTTAATGACAATTATTCATGAAAATAAA < 41bp 1 0.297962287246003 1 0.0854953527450562 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 ZNF22 ENSG00000226937 ncRNA_intronic Human transcribed_processed_pseudogene chr10:45500732 chr10:45500725 . . 0 hm6A_associated_SNPs_12052 0 0 1 2 45500725 45500746 mRNA hsa-miR-433 ZNF22 miRanda miRanda
14034 chr10 47088226 47088226 1 + G C rs564362984 47088239 + 47088219 47088259 41 AACAGATGCCTGGCCTGGGAACCCAGGGATTTCACCTCCAC AACAGATCCCTGGCCTGGGAACCCAGGGATTTCACCTCCAC < 41bp 1 0.0182743645489934 1 0.216677784919739 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 8 NPY4R ENSG00000223477 ncRNA_intronic Human other chr10:47088239 chr10:47088226 . . 0 hm6A_associated_SNPs_12057 0 0 0 1 47088210 47088232 mRNA hsa-miR-338-3p PPYR1 miRanda miRanda
14034 chr10 47088232 47088232 1 + C T rs60799564 47088239 + 47088219 47088259 41 AACAGATGCCTGGCCTGGGAACCCAGGGATTTCACCTCCAC AACAGATGCCTGGTCTGGGAACCCAGGGATTTCACCTCCAC < 41bp 1 0.0176223434862477 1 0.199898451566696 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 14 NPY4R ENSG00000223477 ncRNA_intronic Human other chr10:47088239 chr10:47088232 . . 0 hm6A_associated_SNPs_12058 0 0 0 1 47088210 47088232 mRNA hsa-miR-338-3p PPYR1 miRanda miRanda
14034 chr10 51589291 51589291 1 + C G rs372429941 51589290 + 51589270 51589310 41 CACACATCATGAGCTGAGTGACTGCAGCTTGCCAAATCTTT CACACATCATGAGCTGAGTGAGTGCAGCTTGCCAAATCTTT Direct Loss 1 0.524357900975226 1 0.0163823366165161 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 NCOA4 ENSG00000138293 UTR3 Human other chr10:51589290 chr10:51589291 . . 0 hm6A_associated_SNPs_12062 0 0 1 1 51589280 51589305 mRNA hsa-miR-182 NCOA4 miRanda miRanda
14034 chr10 54076922 54076922 1 + G A rs533166613 54076916 + 54076896 54076936 41 TGACAAATATTCTATATTGAACTGAAGTAAATCATTTCAGC TGACAAATATTCTATATTGAACTGAAATAAATCATTTCAGC < 41bp 1 0.101046647390216 1 0.700809478759766 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 DKK1 ENSG00000107984 UTR3 Human protein_coding chr10:54076916 chr10:54076922 . . 0 hm6A_associated_SNPs_12068 0 0 1 2 54076913 54076935 mRNA hsa-miR-203 DKK1 miRanda miRanda
14034 chr10 54076922 54076922 1 + G A rs533166613 54076916 + 54076896 54076936 41 TGACAAATATTCTATATTGAACTGAAGTAAATCATTTCAGC TGACAAATATTCTATATTGAACTGAAATAAATCATTTCAGC < 41bp 1 0.101046647390216 1 0.700809478759766 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 DKK1 ENSG00000107984 UTR3 Human protein_coding chr10:54076916 chr10:54076922 . . 0 hm6A_associated_SNPs_12068 0 0 1 2 54076898 54076922 mRNA hsa-miR-223 DKK1 miRanda miRanda
14034 chr10 60155120 60155120 1 + G C rs1049432 60155112 + 60155092 60155132 41 CTTTGACAAAGGTAAATCAGACTATGAAGTTTTTTTTATAC CTTTGACAAAGGTAAATCAGACTATGAACTTTTTTTTATAC < 41bp 1 0.43037976713759 1 0.990793287754059 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 29 TFAM ENSG00000108064 UTR3 Human protein_coding chr10:60155112 chr10:60155120 . . 0 hm6A_associated_SNPs_12071 0 0 1 2 60155101 60155122 mRNA hsa-miR-205 TFAM miRanda miRanda
14034 chr10 60155120 60155120 1 + G C rs1049432 60155112 + 60155092 60155132 41 CTTTGACAAAGGTAAATCAGACTATGAAGTTTTTTTTATAC CTTTGACAAAGGTAAATCAGACTATGAACTTTTTTTTATAC < 41bp 1 0.43037976713759 1 0.990793287754059 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 29 TFAM ENSG00000108064 UTR3 Human protein_coding chr10:60155112 chr10:60155120 . . 0 hm6A_associated_SNPs_12071 0 0 1 2 60155115 60155136 mRNA hsa-miR-486-5p TFAM miRanda miRanda
14034 chr10 61005455 61005455 1 + A G rs562408771 61005472 + 61005452 61005492 41 CACATGCCACTGTCACCAAAACAAACAACTACCACTTTCCA CACGTGCCACTGTCACCAAAACAAACAACTACCACTTTCCA < 41bp 1 0.0926878885587386 1 0.764346718788147 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 4 PHYHIPL ENSG00000165443 UTR3 Human protein_coding chr10:61005472 chr10:61005455 . . 0 hm6A_associated_SNPs_12076 0 0 1 1 61005449 61005468 mRNA hsa-miR-542-3p PHYHIPL miRanda miRanda
14034 chr10 61005616 61005616 1 + T C rs76341267 61005635 + 61005615 61005655 41 TTATGTTTCCTTTATGCCAAACATAACAAAACAGTTATATA TCATGTTTCCTTTATGCCAAACATAACAAAACAGTTATATA < 41bp 1 0.101623601631706 1 0.627919971942902 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 2 PHYHIPL ENSG00000165443 UTR3 Human protein_coding chr10:61005635 chr10:61005616 . . 0 hm6A_associated_SNPs_12078 0 0 1 1 61005603 61005624 mRNA hsa-miR-494 PHYHIPL miRanda miRanda
14034 chr10 63853264 63853264 1 + C T rs182829775 63853275 + 63853255 63853295 41 TCAATAGATCTTTCATTTTGACACTATTAAACAATCCAGAG TCAATAGATTTTTCATTTTGACACTATTAAACAATCCAGAG < 41bp 1 0.69938411912128 1 0.848219990730286 experiment 0.601231761757441 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 ARID5B ENSG00000150347 UTR3 Human protein_coding chr10:63853275 chr10:63853264 . . 0 hm6A_associated_SNPs_12083 0 0 1 1 63853259 63853280 mRNA hsa-miR-130b ARID5B miRanda miRanda
14034 chr10 64159389 64159389 1 + C G rs143052727 64159382 + 64159362 64159402 41 CCTGAAAAAGGCCAAGGATGACAGAGCCAGCATGCAGCCTG CCTGAAAAAGGCCAAGGATGACAGAGCGAGCATGCAGCCTG < 41bp 1 0.386477008836505 1 0.655021131038666 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 28 ZNF365 ENSG00000138311 CDS Human protein_coding chr10:64159382 chr10:64159389 synonymous SNV . 0 hm6A_associated_SNPs_12086 0 0 0 1 64159369 64159392 mRNA hsa-miR-149 ZNF365 miRanda miRanda
14034 chr10 64567364 64567364 1 + C T rs1509964 64567363 + 64567343 64567383 41 ACAAAAAGATATTCCACAGGACATGCCACTTTATTATAAAA ACAAAAAGATATTCCACAGGATATGCCACTTTATTATAAAA Direct Loss 1 0.761064178839093 1 0.0240812599658966 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 ADO ENSG00000181915 UTR3 Human protein_coding chr10:64567363 chr10:64567364 . . 0 hm6A_associated_SNPs_12089 0 0 1 2 64567362 64567381 mRNA hsa-miR-374a ADO miRanda miRanda
14034 chr10 64567364 64567364 1 + C T rs1509964 64567363 + 64567343 64567383 41 ACAAAAAGATATTCCACAGGACATGCCACTTTATTATAAAA ACAAAAAGATATTCCACAGGATATGCCACTTTATTATAAAA Direct Loss 1 0.761064178839093 1 0.0240812599658966 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 ADO ENSG00000181915 UTR3 Human protein_coding chr10:64567363 chr10:64567364 . . 0 hm6A_associated_SNPs_12089 0 0 1 2 64567362 64567381 mRNA hsa-miR-374b ADO miRanda miRanda
14034 chr10 64914189 64914189 1 + C T rs185882571 64914207 + 64914187 64914227 41 TCCGACTTGGCAGACGCTAAACTCATGGAGGTTCGGTTTCT TCTGACTTGGCAGACGCTAAACTCATGGAGGTTCGGTTTCT < 41bp 1 0.529314066155158 1 0.880262672901154 experiment 0.941371867689683 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 3 NRBF2 ENSG00000148572 UTR3 Human protein_coding chr10:64914207 chr10:64914189 . . 0 hm6A_associated_SNPs_12091 0 0 1 1 64914180 64914202 mRNA hsa-miR-346 NRBF2 miRanda miRanda
14034 chr10 64914193 64914193 1 + T C rs16918239 64914207 + 64914187 64914227 41 TCCGACTTGGCAGACGCTAAACTCATGGAGGTTCGGTTTCT TCCGACCTGGCAGACGCTAAACTCATGGAGGTTCGGTTTCT < 41bp 1 0.541977662083106 1 0.921017646789551 experiment 0.916044675833787 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 NRBF2 ENSG00000148572 UTR3 Human protein_coding chr10:64914207 chr10:64914193 . . 0 hm6A_associated_SNPs_12092 0 0 1 1 64914180 64914202 mRNA hsa-miR-346 NRBF2 miRanda miRanda
14034 chr10 69676830 69676830 1 + T C rs4746720 69676841 + 69676821 69676861 41 GCTAAACTTTTGATTCTTTAACACAATTATTTTTAAACACT GCTAAACTTCTGATTCTTTAACACAATTATTTTTAAACACT < 41bp 1 0.368931076185423 1 0.758655786514282 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676841 chr10:69676830 . . 0 hm6A_associated_SNPs_12097 0 0 1 2 69676819 69676840 mRNA hsa-miR-186 SIRT1 miRanda miRanda
14034 chr10 69676830 69676830 1 + T C rs4746720 69676841 + 69676821 69676861 41 GCTAAACTTTTGATTCTTTAACACAATTATTTTTAAACACT GCTAAACTTCTGATTCTTTAACACAATTATTTTTAAACACT < 41bp 1 0.368931076185423 1 0.758655786514282 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676841 chr10:69676830 . . 0 hm6A_associated_SNPs_12097 0 0 1 2 69676828 69676847 mRNA hsa-miR-599 SIRT1 miRanda miRanda
14034 chr10 69676836 69676836 1 + C G rs191683727 69676841 + 69676821 69676861 41 GCTAAACTTTTGATTCTTTAACACAATTATTTTTAAACACT GCTAAACTTTTGATTGTTTAACACAATTATTTTTAAACACT < 41bp 1 0.377988018981662 1 0.81168407201767 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676841 chr10:69676836 . . 0 hm6A_associated_SNPs_12098 0 0 1 2 69676819 69676840 mRNA hsa-miR-186 SIRT1 miRanda miRanda
14034 chr10 69676836 69676836 1 + C G rs191683727 69676841 + 69676821 69676861 41 GCTAAACTTTTGATTCTTTAACACAATTATTTTTAAACACT GCTAAACTTTTGATTGTTTAACACAATTATTTTTAAACACT < 41bp 1 0.377988018981662 1 0.81168407201767 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676841 chr10:69676836 . . 0 hm6A_associated_SNPs_12098 0 0 1 2 69676828 69676847 mRNA hsa-miR-599 SIRT1 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676857 + 69676837 69676877 41 TTTAACACAATTATTTTTAAACACTGGCATTTTCCAAAACT TTTAACACAATTATTTTTAAACACTGACATTTTCCAAAACT < 41bp 1 0.493801510529496 1 0.857135772705078 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676857 chr10:69676863 . . 0 hm6A_associated_SNPs_12099 0 0 1 4 69676841 69676864 mRNA hsa-miR-199a-5p SIRT1 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676857 + 69676837 69676877 41 TTTAACACAATTATTTTTAAACACTGGCATTTTCCAAAACT TTTAACACAATTATTTTTAAACACTGACATTTTCCAAAACT < 41bp 1 0.493801510529496 1 0.857135772705078 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676857 chr10:69676863 . . 0 hm6A_associated_SNPs_12099 0 0 1 4 69676843 69676865 mRNA hsa-miR-34a SIRT1 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676857 + 69676837 69676877 41 TTTAACACAATTATTTTTAAACACTGGCATTTTCCAAAACT TTTAACACAATTATTTTTAAACACTGACATTTTCCAAAACT < 41bp 1 0.493801510529496 1 0.857135772705078 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676857 chr10:69676863 . . 0 hm6A_associated_SNPs_12099 0 0 1 4 69676841 69676864 mRNA hsa-miR-199b-5p SIRT1 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676857 + 69676837 69676877 41 TTTAACACAATTATTTTTAAACACTGGCATTTTCCAAAACT TTTAACACAATTATTTTTAAACACTGACATTTTCCAAAACT < 41bp 1 0.493801510529496 1 0.857135772705078 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676857 chr10:69676863 . . 0 hm6A_associated_SNPs_12099 0 0 1 4 69676843 69676865 mRNA hsa-miR-34c-5p SIRT1 miRanda miRanda
14034 chr10 70513684 70513684 1 + A G rs5030887 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAGTTTA < 41bp 1 0.417009226517694 1 0.829329133033752 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513684 synonymous SNV . 0 hm6A_associated_SNPs_12110 0 0 1 3 70513678 70513703 mRNA hsa-miR-29a CCAR1 miRanda miRanda
14034 chr10 70513684 70513684 1 + A G rs5030887 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAGTTTA < 41bp 1 0.417009226517694 1 0.829329133033752 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513684 synonymous SNV . 0 hm6A_associated_SNPs_12110 0 0 1 3 70513673 70513696 mRNA hsa-miR-10a CCAR1 miRanda miRanda
14034 chr10 70513684 70513684 1 + A G rs5030887 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAGTTTA < 41bp 1 0.417009226517694 1 0.829329133033752 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513684 synonymous SNV . 0 hm6A_associated_SNPs_12110 0 0 1 3 70513678 70513702 mRNA hsa-miR-324-5p CCAR1 miRanda miRanda
14034 chr10 70551232 70551232 1 + T C rs566694355 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGCGAAATAAT < 41bp 1 0.736981901782695 1 0.0669112503528595 experiment 0.526036196434611 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 33 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551232 . . 0 hm6A_associated_SNPs_12112 0 0 1 5 70551228 70551249 mRNA hsa-miR-130a CCAR1 miRanda miRanda
14034 chr10 70551232 70551232 1 + T C rs566694355 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGCGAAATAAT < 41bp 1 0.736981901782695 1 0.0669112503528595 experiment 0.526036196434611 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 33 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551232 . . 0 hm6A_associated_SNPs_12112 0 0 1 5 70551228 70551249 mRNA hsa-miR-301a CCAR1 miRanda miRanda
14034 chr10 70551232 70551232 1 + T C rs566694355 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGCGAAATAAT < 41bp 1 0.736981901782695 1 0.0669112503528595 experiment 0.526036196434611 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 33 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551232 . . 0 hm6A_associated_SNPs_12112 0 0 1 5 70551229 70551249 mRNA hsa-miR-130b CCAR1 miRanda miRanda
14034 chr10 70551232 70551232 1 + T C rs566694355 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGCGAAATAAT < 41bp 1 0.736981901782695 1 0.0669112503528595 experiment 0.526036196434611 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 33 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551232 . . 0 hm6A_associated_SNPs_12112 0 0 1 5 70551227 70551249 mRNA hsa-miR-454 CCAR1 miRanda miRanda
14034 chr10 70551232 70551232 1 + T C rs566694355 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGCGAAATAAT < 41bp 1 0.736981901782695 1 0.0669112503528595 experiment 0.526036196434611 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 33 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551232 . . 0 hm6A_associated_SNPs_12112 0 0 1 5 70551228 70551249 mRNA hsa-miR-301b CCAR1 miRanda miRanda
14034 chr10 70551237 70551237 1 + T C rs535167884 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAACAAT < 41bp 1 0.729019041724184 1 0.0556567311286926 experiment 0.541961916551632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 38 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551237 . . 0 hm6A_associated_SNPs_12113 0 0 1 6 70551228 70551249 mRNA hsa-miR-130a CCAR1 miRanda miRanda
14034 chr10 70551237 70551237 1 + T C rs535167884 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAACAAT < 41bp 1 0.729019041724184 1 0.0556567311286926 experiment 0.541961916551632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 38 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551237 . . 0 hm6A_associated_SNPs_12113 0 0 1 6 70551237 70551259 mRNA hsa-miR-141 CCAR1 miRanda miRanda
14034 chr10 70551237 70551237 1 + T C rs535167884 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAACAAT < 41bp 1 0.729019041724184 1 0.0556567311286926 experiment 0.541961916551632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 38 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551237 . . 0 hm6A_associated_SNPs_12113 0 0 1 6 70551228 70551249 mRNA hsa-miR-301a CCAR1 miRanda miRanda
14034 chr10 70551237 70551237 1 + T C rs535167884 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAACAAT < 41bp 1 0.729019041724184 1 0.0556567311286926 experiment 0.541961916551632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 38 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551237 . . 0 hm6A_associated_SNPs_12113 0 0 1 6 70551229 70551249 mRNA hsa-miR-130b CCAR1 miRanda miRanda
14034 chr10 70551237 70551237 1 + T C rs535167884 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAACAAT < 41bp 1 0.729019041724184 1 0.0556567311286926 experiment 0.541961916551632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 38 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551237 . . 0 hm6A_associated_SNPs_12113 0 0 1 6 70551227 70551249 mRNA hsa-miR-454 CCAR1 miRanda miRanda
14034 chr10 70551237 70551237 1 + T C rs535167884 70551220 + 70551200 70551240 41 CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAAT CCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAACAAT < 41bp 1 0.729019041724184 1 0.0556567311286926 experiment 0.541961916551632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control 38 CCAR1 ENSG00000060339 UTR3 Human protein_coding chr10:70551220 chr10:70551237 . . 0 hm6A_associated_SNPs_12113 0 0 1 6 70551228 70551249 mRNA hsa-miR-301b CCAR1 miRanda miRanda
14034 chr10 70743014 70743014 1 + C G rs74139956 70743013 + 70742993 70743033 41 TTTCCTCAGCCACCTGCCGAACAGTTTCTCATGTGGTCCTA TTTCCTCAGCCACCTGCCGAAGAGTTTCTCATGTGGTCCTA Direct Loss 1 0.39515858740363 1 0.18831866979599 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 22 DDX21 ENSG00000165732 UTR3 Human protein_coding chr10:70743013 chr10:70743014 . . 0 hm6A_associated_SNPs_12121 0 0 1 1 70743003 70743023 mRNA hsa-miR-146b-5p DDX21 miRanda miRanda
14034 chr10 70743427 70743427 1 + C T rs563186250 70743409 + 70743389 70743429 41 AACATTATTTACCAAGAAGGACTTAAGGGAGTAGGGGGCGC AACATTATTTACCAAGAAGGACTTAAGGGAGTAGGGGGTGC < 41bp 1 0.673872768628131 1 0.878417909145355 experiment 0.652254462743738 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 DDX21 ENSG00000165732 UTR3 Human protein_coding chr10:70743409 chr10:70743427 . . 0 hm6A_associated_SNPs_12125 0 0 1 1 70743424 70743447 mRNA hsa-miR-182 DDX21 miRanda miRanda
14034 chr10 70847918 70847918 1 + T A rs115958601 70847902 + 70847882 70847922 41 CGTGCAGCTGGGAGAGCTAGACTAAGTTGGTCATGATGCAG CGTGCAGCTGGGAGAGCTAGACTAAGTTGGTCATGAAGCAG < 41bp 1 0.446476418181722 1 0.934812009334564 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 37 SRGN ENSG00000122862 CDS Human protein_coding chr10:70847902 chr10:70847918 nonsynonymous SNV 0.290 3 hm6A_associated_SNPs_12132 0 0 1 2 70847917 70847941 mRNA hsa-miR-217 SRGN miRanda miRanda
14034 chr10 70847918 70847918 1 + T A rs115958601 70847902 + 70847882 70847922 41 CGTGCAGCTGGGAGAGCTAGACTAAGTTGGTCATGATGCAG CGTGCAGCTGGGAGAGCTAGACTAAGTTGGTCATGAAGCAG < 41bp 1 0.446476418181722 1 0.934812009334564 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 37 SRGN ENSG00000122862 CDS Human protein_coding chr10:70847902 chr10:70847918 nonsynonymous SNV 0.290 3 hm6A_associated_SNPs_12132 0 0 1 2 70847904 70847925 mRNA hsa-miR-544 SRGN miRanda miRanda
14034 chr10 70932058 70932058 1 + T C rs576950803 70932064 + 70932044 70932084 41 TCTAGTCTCTTAATTTTTTAACACTAAATTCAAGTCATTTG TCTAGTCTCTTAATCTTTTAACACTAAATTCAAGTCATTTG < 41bp 1 0.266187667233976 1 0.0338624119758606 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 15 VPS26A ENSG00000122958 UTR3 Human protein_coding chr10:70932064 chr10:70932058 . . 0 hm6A_associated_SNPs_12136 0 0 1 1 70932049 70932071 mRNA hsa-miR-142-3p VPS26A miRanda miRanda
14034 chr10 71026510 71026510 1 + C A rs906219 71026530 + 71026510 71026550 41 CTAGGAACCCCTGGGATTGGACCTGATGCATCTTGGATACT ATAGGAACCCCTGGGATTGGACCTGATGCATCTTGGATACT < 41bp 1 0.287514897066369 1 0.968315958976746 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 1 HKDC1 ENSG00000156510 CDS Human protein_coding chr10:71026530 chr10:71026510 nonsynonymous SNV 0.498 2 hm6A_associated_SNPs_12139 0 0 0 2 71026493 71026516 mRNA hsa-miR-145 HKDC1 miRanda miRanda
14034 chr10 71026510 71026510 1 + C A rs906219 71026530 + 71026510 71026550 41 CTAGGAACCCCTGGGATTGGACCTGATGCATCTTGGATACT ATAGGAACCCCTGGGATTGGACCTGATGCATCTTGGATACT < 41bp 1 0.287514897066369 1 0.968315958976746 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 1 HKDC1 ENSG00000156510 CDS Human protein_coding chr10:71026530 chr10:71026510 nonsynonymous SNV 0.498 2 hm6A_associated_SNPs_12139 0 0 0 2 71026498 71026517 mRNA hsa-miR-384 HKDC1 miRanda miRanda
14034 chr10 71267406 71267406 1 + T C rs556231065 71267394 + 71267374 71267414 41 CCAACCAGTTTGTTAATCAAACAATAAAAACATGTTTTTTT CCAACCAGTTTGTTAATCAAACAATAAAAACACGTTTTTTT < 41bp 1 0.314314708296265 1 0.20869192481041 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 TSPAN15 ENSG00000099282 UTR3 Human protein_coding chr10:71267394 chr10:71267406 . . 0 hm6A_associated_SNPs_12147 0 0 1 1 71267391 71267412 mRNA hsa-miR-494 TSPAN15 miRanda miRanda
14034 chr10 74035402 74035402 1 + C T rs144800618 74035401 + 74035381 74035421 41 TATCTTACTGGTCTGAAGGGACCAAGTGTGTTTGTTGTTTG TATCTTACTGGTCTGAAGGGATCAAGTGTGTTTGTTGTTTG Direct Loss 1 0.183943345172672 1 0.745716869831085 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 DDIT4 ENSG00000269926 ncRNA_intronic Human antisense chr10:74035401 chr10:74035402 . . 0 hm6A_associated_SNPs_12195 0 0 1 3 74035385 74035406 mRNA hsa-miR-133a DDIT4 miRanda miRanda
14034 chr10 74035402 74035402 1 + C T rs144800618 74035401 + 74035381 74035421 41 TATCTTACTGGTCTGAAGGGACCAAGTGTGTTTGTTGTTTG TATCTTACTGGTCTGAAGGGATCAAGTGTGTTTGTTGTTTG Direct Loss 1 0.183943345172672 1 0.745716869831085 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 DDIT4 ENSG00000269926 ncRNA_intronic Human antisense chr10:74035401 chr10:74035402 . . 0 hm6A_associated_SNPs_12195 0 0 1 3 74035385 74035406 mRNA hsa-miR-133b DDIT4 miRanda miRanda
14034 chr10 74035402 74035402 1 + C T rs144800618 74035401 + 74035381 74035421 41 TATCTTACTGGTCTGAAGGGACCAAGTGTGTTTGTTGTTTG TATCTTACTGGTCTGAAGGGATCAAGTGTGTTTGTTGTTTG Direct Loss 1 0.183943345172672 1 0.745716869831085 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 DDIT4 ENSG00000269926 ncRNA_intronic Human antisense chr10:74035401 chr10:74035402 . . 0 hm6A_associated_SNPs_12195 0 0 1 3 74035401 74035424 mRNA hsa-miR-495 DDIT4 miRanda miRanda
14034 chr10 74647378 74647378 1 + T A rs190002663 74647366 + 74647346 74647386 41 AACAAATAGCAAACTATTGAACATGTGTAAAATCCTGTATC AACAAATAGCAAACTATTGAACATGTGTAAAAACCTGTATC < 41bp 1 0.578351993524054 1 0.241950929164886 experiment 0.843296012951893 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 MCU ENSG00000156026 UTR3 Human protein_coding chr10:74647366 chr10:74647378 . . 0 hm6A_associated_SNPs_12199 0 0 1 4 74647375 74647395 mRNA hsa-miR-376a CCDC109A miRanda miRanda
14034 chr10 74647378 74647378 1 + T A rs190002663 74647366 + 74647346 74647386 41 AACAAATAGCAAACTATTGAACATGTGTAAAATCCTGTATC AACAAATAGCAAACTATTGAACATGTGTAAAAACCTGTATC < 41bp 1 0.578351993524054 1 0.241950929164886 experiment 0.843296012951893 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 MCU ENSG00000156026 UTR3 Human protein_coding chr10:74647366 chr10:74647378 . . 0 hm6A_associated_SNPs_12199 0 0 1 4 74647374 74647395 mRNA hsa-miR-376b CCDC109A miRanda miRanda
14034 chr10 74647378 74647378 1 + T A rs190002663 74647366 + 74647346 74647386 41 AACAAATAGCAAACTATTGAACATGTGTAAAATCCTGTATC AACAAATAGCAAACTATTGAACATGTGTAAAAACCTGTATC < 41bp 1 0.578351993524054 1 0.241950929164886 experiment 0.843296012951893 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 MCU ENSG00000156026 UTR3 Human protein_coding chr10:74647366 chr10:74647378 . . 0 hm6A_associated_SNPs_12199 0 0 1 4 74647360 74647380 mRNA hsa-miR-590-3p CCDC109A miRanda miRanda
14034 chr10 74647378 74647378 1 + T A rs190002663 74647366 + 74647346 74647386 41 AACAAATAGCAAACTATTGAACATGTGTAAAATCCTGTATC AACAAATAGCAAACTATTGAACATGTGTAAAAACCTGTATC < 41bp 1 0.578351993524054 1 0.241950929164886 experiment 0.843296012951893 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 MCU ENSG00000156026 UTR3 Human protein_coding chr10:74647366 chr10:74647378 . . 0 hm6A_associated_SNPs_12199 0 0 1 4 74647360 74647381 mRNA hsa-miR-876-5p CCDC109A miRanda miRanda
14034 chr10 75531699 75531699 1 + C T rs114029318 75531707 + 75531687 75531727 41 CGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTAT CGCCGTTCTCTCTTGCTGGGACACCGCTTGGGCTTTGGTAT < 41bp 1 0.693142032944897 1 0.13326495885849 experiment 0.613715934110206 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control 13 SEC24C ENSG00000176986 UTR3 Human protein_coding chr10:75531707 chr10:75531699 . . 0 hm6A_associated_SNPs_12205 0 0 1 1 75531685 75531705 mRNA hsa-miR-214 SEC24C miRanda miRanda
14034 chr10 75531700 75531700 1 + T C rs144190215 75531707 + 75531687 75531727 41 CGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTAT CGCCGTTCTCTCCCGCTGGGACACCGCTTGGGCTTTGGTAT < 41bp 1 0.648951832462165 1 0.12680396437645 experiment 0.70209633507567 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control 14 SEC24C ENSG00000176986 UTR3 Human protein_coding chr10:75531707 chr10:75531700 . . 0 hm6A_associated_SNPs_12206 0 0 1 1 75531685 75531705 mRNA hsa-miR-214 SEC24C miRanda miRanda
14034 chr10 75878219 75878219 1 + G C rs77295081 75878203 + 75878183 75878223 41 ACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAATC ACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCACAATC < 41bp 1 0.542048177822269 1 0.876916110515594 experiment 0.915903644355463 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 37 VCL ENSG00000035403 UTR3 Human protein_coding chr10:75878203 chr10:75878219 . . 0 hm6A_associated_SNPs_12227 1 0 1 1 75878219 75878240 mRNA hsa-miR-34a VCL miRanda miRanda
14034 chr10 75878219 75878219 1 + G C rs77295081 75878231 + 75878211 75878251 41 TAAGCTCAGAATCCAAGTGAACACTAGCCAGACACTCTGCT TAAGCTCACAATCCAAGTGAACACTAGCCAGACACTCTGCT < 41bp 1 0.698274635737501 1 0.197823762893677 experiment 0.603450728524998 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 9 VCL ENSG00000035403 UTR3 Human protein_coding chr10:75878231 chr10:75878219 . . 0 hm6A_associated_SNPs_12228 1 0 1 1 75878219 75878240 mRNA hsa-miR-34a VCL miRanda miRanda
14034 chr10 77168302 77168302 1 + C T rs540309171 77168313 + 77168293 77168333 41 CCTATATTTCACCAGCCCTGACATATTTATGAATCGCTCCC CCTATATTTTACCAGCCCTGACATATTTATGAATCGCTCCC < 41bp 1 0.112699577885129 1 0.311862707138062 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77168313 chr10:77168302 . . 0 hm6A_associated_SNPs_12242 0 0 1 1 77168290 77168309 mRNA hsa-miR-138 C10orf41 miRanda miRanda
14034 chr10 81056240 81056240 1 + A C rs147476107 81056259 + 81056239 81056279 41 AAACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGC ACACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGC < 41bp 1 0.18250393439537 1 0.881361722946167 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81056259 chr10:81056240 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_12251 0 0 1 3 81056238 81056259 mRNA hsa-miR-133a ZMIZ1 miRanda miRanda
14034 chr10 81056240 81056240 1 + A C rs147476107 81056259 + 81056239 81056279 41 AAACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGC ACACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGC < 41bp 1 0.18250393439537 1 0.881361722946167 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81056259 chr10:81056240 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_12251 0 0 1 3 81056229 81056251 mRNA hsa-miR-137 ZMIZ1 miRanda miRanda
14034 chr10 81056240 81056240 1 + A C rs147476107 81056259 + 81056239 81056279 41 AAACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGC ACACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGC < 41bp 1 0.18250393439537 1 0.881361722946167 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81056259 chr10:81056240 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_12251 0 0 1 3 81056238 81056259 mRNA hsa-miR-133b ZMIZ1 miRanda miRanda
14034 chr10 81113927 81113927 1 + A G rs117391830 81113940 + 81113920 81113960 41 AAGTGAAAGTCTTTTCCTTGACCAAGGGGGACAGTCAGTTT AAGTGAAGGTCTTTTCCTTGACCAAGGGGGACAGTCAGTTT < 41bp 1 0.606545775847449 1 0.973066687583923 experiment 0.786908448305103 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 PPIF ENSG00000108179 UTR3 Human protein_coding chr10:81113940 chr10:81113927 . . 0 hm6A_associated_SNPs_12268 0 0 1 1 81113921 81113945 mRNA hsa-miR-182 PPIF miRanda miRanda
14034 chr10 82192034 82192034 1 + C A rs150850285 82192033 + 82192013 82192053 41 TAAGGCAAAATAGCCCCAAAACAAGACTGACAAAAATCTGA TAAGGCAAAATAGCCCCAAAAAAAGACTGACAAAAATCTGA Direct Loss 1 0.551967849967495 1 0.809940218925476 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 FAM213A ENSG00000122378 UTR3 Human protein_coding chr10:82192033 chr10:82192034 . . 0 hm6A_associated_SNPs_12275 0 0 1 2 82192028 82192049 mRNA hsa-miR-129-5p C10orf58 miRanda miRanda
14034 chr10 82192034 82192034 1 + C A rs150850285 82192033 + 82192013 82192053 41 TAAGGCAAAATAGCCCCAAAACAAGACTGACAAAAATCTGA TAAGGCAAAATAGCCCCAAAAAAAGACTGACAAAAATCTGA Direct Loss 1 0.551967849967495 1 0.809940218925476 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 FAM213A ENSG00000122378 UTR3 Human protein_coding chr10:82192033 chr10:82192034 . . 0 hm6A_associated_SNPs_12275 0 0 1 2 82192022 82192044 mRNA hsa-miR-223 C10orf58 miRanda miRanda
14034 chr10 82192034 82192034 1 + C A rs150850285 82192042 + 82192022 82192062 41 ATAGCCCCAAAACAAGACTGACAAAAATCTGAAAAACTAAT ATAGCCCCAAAAAAAGACTGACAAAAATCTGAAAAACTAAT < 41bp 1 0.693441353722406 1 0.654654264450073 experiment 0.613117292555188 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 13 FAM213A ENSG00000122378 UTR3 Human protein_coding chr10:82192042 chr10:82192034 . . 0 hm6A_associated_SNPs_12276 0 0 1 2 82192028 82192049 mRNA hsa-miR-129-5p C10orf58 miRanda miRanda
14034 chr10 82192034 82192034 1 + C A rs150850285 82192042 + 82192022 82192062 41 ATAGCCCCAAAACAAGACTGACAAAAATCTGAAAAACTAAT ATAGCCCCAAAAAAAGACTGACAAAAATCTGAAAAACTAAT < 41bp 1 0.693441353722406 1 0.654654264450073 experiment 0.613117292555188 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 13 FAM213A ENSG00000122378 UTR3 Human protein_coding chr10:82192042 chr10:82192034 . . 0 hm6A_associated_SNPs_12276 0 0 1 2 82192022 82192044 mRNA hsa-miR-223 C10orf58 miRanda miRanda
14034 chr10 82282258 82282258 1 + C A rs113925089 82282247 + 82282227 82282267 41 ACTGCGCTCCGGCCTGGGTGACAGGAGACTCCATCTCAAAA ACTGCGCTCCGGCCTGGGTGACAGGAGACTCAATCTCAAAA < 41bp 1 0.19168357693213 1 0.432808727025986 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 32 TSPAN14 ENSG00000108219 UTR3 Human protein_coding chr10:82282247 chr10:82282258 . . 0 hm6A_associated_SNPs_12291 0 0 0 1 82282257 82282277 mRNA hsa-miR-590-3p TSPAN14 miRanda miRanda
14034 chr10 82282258 82282258 1 + C A rs113925089 82282254 + 82282234 82282274 41 TCCGGCCTGGGTGACAGGAGACTCCATCTCAAAAAATAAAA TCCGGCCTGGGTGACAGGAGACTCAATCTCAAAAAATAAAA < 41bp 1 0.131729933347126 1 0.344057470560074 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 25 TSPAN14 ENSG00000108219 UTR3 Human protein_coding chr10:82282254 chr10:82282258 . . 0 hm6A_associated_SNPs_12292 0 0 0 1 82282257 82282277 mRNA hsa-miR-590-3p TSPAN14 miRanda miRanda
14034 chr10 82282316 82282316 1 + A G rs17401981 82282311 + 82282291 82282331 41 ACAATAAATTATCACCTTGGACTGTATAAAACAACTTTTAA ACAATAAATTATCACCTTGGACTGTGTAAAACAACTTTTAA < 41bp 1 0.129885378623566 1 0.90919041633606 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 TSPAN14 ENSG00000108219 UTR3 Human protein_coding chr10:82282311 chr10:82282316 . . 0 hm6A_associated_SNPs_12293 0 0 1 1 82282307 82282328 mRNA hsa-miR-382 TSPAN14 miRanda miRanda
14034 chr10 85912606 85912606 1 + A C rs7576 85912618 + 85912598 85912638 41 TAGTGAGGAGCCAGTAAGAAACATCTGGGTATTTGGAAACA TAGTGAGGCGCCAGTAAGAAACATCTGGGTATTTGGAAACA < 41bp 1 0.560174410850365 1 0.548641741275787 experiment 0.87965117829927 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 GHITM ENSG00000165678 UTR3 Human protein_coding chr10:85912618 chr10:85912606 . . 0 hm6A_associated_SNPs_12294 0 0 1 2 85912589 85912612 mRNA hsa-miR-149 GHITM miRanda miRanda
14034 chr10 85912606 85912606 1 + A C rs7576 85912618 + 85912598 85912638 41 TAGTGAGGAGCCAGTAAGAAACATCTGGGTATTTGGAAACA TAGTGAGGCGCCAGTAAGAAACATCTGGGTATTTGGAAACA < 41bp 1 0.560174410850365 1 0.548641741275787 experiment 0.87965117829927 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 GHITM ENSG00000165678 UTR3 Human protein_coding chr10:85912618 chr10:85912606 . . 0 hm6A_associated_SNPs_12294 0 0 1 2 85912590 85912613 mRNA hsa-miR-193b GHITM miRanda miRanda
14034 chr10 88684239 88684239 1 + C T rs564673436 88684251 + 88684231 88684271 41 TAAAGCATCTGTAAATTTGGACTGTTTTCCTTCAACCACCA TAAAGCATTTGTAAATTTGGACTGTTTTCCTTCAACCACCA < 41bp 1 0.597615576157667 1 0.994096279144287 experiment 0.804768847684665 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 BMPR1A ENSG00000107779 UTR3 Human protein_coding chr10:88684251 chr10:88684239 . . 0 hm6A_associated_SNPs_12297 0 0 0 2 88684237 88684257 mRNA hsa-miR-212 BMPR1A miRanda miRanda
14034 chr10 88684239 88684239 1 + C T rs564673436 88684251 + 88684231 88684271 41 TAAAGCATCTGTAAATTTGGACTGTTTTCCTTCAACCACCA TAAAGCATTTGTAAATTTGGACTGTTTTCCTTCAACCACCA < 41bp 1 0.597615576157667 1 0.994096279144287 experiment 0.804768847684665 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 BMPR1A ENSG00000107779 UTR3 Human protein_coding chr10:88684251 chr10:88684239 . . 0 hm6A_associated_SNPs_12297 0 0 0 2 88684236 88684257 mRNA hsa-miR-132 BMPR1A miRanda miRanda
14034 chr10 88684240 88684240 1 + T C rs150762162 88684251 + 88684231 88684271 41 TAAAGCATCTGTAAATTTGGACTGTTTTCCTTCAACCACCA TAAAGCATCCGTAAATTTGGACTGTTTTCCTTCAACCACCA < 41bp 1 0.623008677893301 1 0.995376944541931 experiment 0.753982644213399 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 BMPR1A ENSG00000107779 UTR3 Human protein_coding chr10:88684251 chr10:88684240 . . 0 hm6A_associated_SNPs_12298 1 0 1 2 88684237 88684257 mRNA hsa-miR-212 BMPR1A miRanda miRanda
14034 chr10 88684240 88684240 1 + T C rs150762162 88684251 + 88684231 88684271 41 TAAAGCATCTGTAAATTTGGACTGTTTTCCTTCAACCACCA TAAAGCATCCGTAAATTTGGACTGTTTTCCTTCAACCACCA < 41bp 1 0.623008677893301 1 0.995376944541931 experiment 0.753982644213399 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 BMPR1A ENSG00000107779 UTR3 Human protein_coding chr10:88684251 chr10:88684240 . . 0 hm6A_associated_SNPs_12298 1 0 1 2 88684236 88684257 mRNA hsa-miR-132 BMPR1A miRanda miRanda
14034 chr10 88684245 88684245 1 + A T rs546831287 88684251 + 88684231 88684271 41 TAAAGCATCTGTAAATTTGGACTGTTTTCCTTCAACCACCA TAAAGCATCTGTAATTTTGGACTGTTTTCCTTCAACCACCA < 41bp 1 0.625148230344169 1 0.99227511882782 experiment 0.749703539311662 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 BMPR1A ENSG00000107779 UTR3 Human protein_coding chr10:88684251 chr10:88684245 . . 0 hm6A_associated_SNPs_12299 0 0 1 2 88684237 88684257 mRNA hsa-miR-212 BMPR1A miRanda miRanda
14034 chr10 88684245 88684245 1 + A T rs546831287 88684251 + 88684231 88684271 41 TAAAGCATCTGTAAATTTGGACTGTTTTCCTTCAACCACCA TAAAGCATCTGTAATTTTGGACTGTTTTCCTTCAACCACCA < 41bp 1 0.625148230344169 1 0.99227511882782 experiment 0.749703539311662 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 BMPR1A ENSG00000107779 UTR3 Human protein_coding chr10:88684251 chr10:88684245 . . 0 hm6A_associated_SNPs_12299 0 0 1 2 88684236 88684257 mRNA hsa-miR-132 BMPR1A miRanda miRanda
14034 chr10 88730374 88730374 1 + C T rs7960 88730393 + 88730373 88730413 41 ACAGCAGGGAGACTTGGGTGACCCCCCTTCCAGGCGCCATC ATAGCAGGGAGACTTGGGTGACCCCCCTTCCAGGCGCCATC < 41bp 1 0.665845369891961 1 0.963089108467102 experiment 0.668309260216078 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 ADIRF ENSG00000272734 ncRNA_exonic Human processed_transcript chr10:88730393 chr10:88730374 . . 0 hm6A_associated_SNPs_12301 0 0 0 1 88730360 88730381 mRNA hsa-miR-370 C10orf116 miRanda miRanda
14034 chr10 90683040 90683040 1 + C T rs147342229 90683028 + 90683008 90683048 41 CATCAGACACCTACTCATGGACATGTGGTTGCCGGATTTTC CATCAGACACCTACTCATGGACATGTGGTTGCTGGATTTTC < 41bp 1 0.450985837015147 1 0.902395904064178 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 STAMBPL1 ENSG00000138134 UTR3 Human protein_coding chr10:90683028 chr10:90683040 . . 0 hm6A_associated_SNPs_12311 0 0 1 2 90683040 90683062 mRNA hsa-miR-30c STAMBPL1 miRanda miRanda
14034 chr10 90683040 90683040 1 + C T rs147342229 90683028 + 90683008 90683048 41 CATCAGACACCTACTCATGGACATGTGGTTGCCGGATTTTC CATCAGACACCTACTCATGGACATGTGGTTGCTGGATTTTC < 41bp 1 0.450985837015147 1 0.902395904064178 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 STAMBPL1 ENSG00000138134 UTR3 Human protein_coding chr10:90683028 chr10:90683040 . . 0 hm6A_associated_SNPs_12311 0 0 1 2 90683040 90683061 mRNA hsa-miR-494 STAMBPL1 miRanda miRanda
14034 chr10 91498041 91498041 1 + C T rs117564945 91498051 + 91498031 91498071 41 GGAAAGAGAGCGCTTTCAGAACTTACACAAGGTGTTACTTG GGAAAGAGAGTGCTTTCAGAACTTACACAAGGTGTTACTTG < 41bp 1 0.730618272580744 1 0.986134171485901 experiment 0.538763454838511 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 KIF20B ENSG00000138182 CDS Human protein_coding chr10:91498051 chr10:91498041 nonsynonymous SNV 0.338 0 hm6A_associated_SNPs_12317 0 0 1 1 91498028 91498049 mRNA hsa-miR-488 KIF20B miRanda miRanda
14034 chr10 92660503 92660503 1 + A G rs376181731 92660508 + 92660488 92660528 41 TCAGCCACAACAAAAATAAAACCTTTGTGTGATTTACTGTT TCAGCCACAACAAAAGTAAAACCTTTGTGTGATTTACTGTT < 41bp 1 0.0265989866740098 1 0.71004980802536 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 16 RPP30 ENSG00000148688 UTR3 Human protein_coding chr10:92660508 chr10:92660503 . . 0 hm6A_associated_SNPs_12318 0 0 1 1 92660497 92660520 mRNA hsa-miR-377 RPP30 miRanda miRanda
14034 chr10 93711300 93711300 1 + G T rs143465709 93711313 + 93711293 93711333 41 AACTTCAGCATCCTTTGTTAACAAACAACCTGTAGGTAAAA AACTTCATCATCCTTTGTTAACAAACAACCTGTAGGTAAAA < 41bp 1 0.473998797951142 1 0.89505410194397 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93711313 chr10:93711300 nonsynonymous SNV 0.968 1 hm6A_associated_SNPs_12326 0 0 1 1 93711290 93711312 mRNA hsa-miR-495 BTAF1 miRanda miRanda
14034 chr10 93711300 93711300 1 + G T rs143465709 93711317 + 93711297 93711337 41 TCAGCATCCTTTGTTAACAAACAACCTGTAGGTAAAACGTT TCATCATCCTTTGTTAACAAACAACCTGTAGGTAAAACGTT < 41bp 1 0.472650906272438 1 0.874380230903625 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 4 BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93711317 chr10:93711300 nonsynonymous SNV 0.968 1 hm6A_associated_SNPs_12327 0 0 1 1 93711290 93711312 mRNA hsa-miR-495 BTAF1 miRanda miRanda
14034 chr10 93789395 93789395 1 + T C rs142894653 93789411 + 93789391 93789431 41 GATATAGCCAGATTCAAATAACATATGTACTCAATAGGTTT GATACAGCCAGATTCAAATAACATATGTACTCAATAGGTTT < 41bp 1 0.384741669128474 1 0.0108039677143097 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 BTAF1 ENSG00000095564 UTR3 Human protein_coding chr10:93789411 chr10:93789395 . . 0 hm6A_associated_SNPs_12330 0 0 1 2 93789380 93789402 mRNA hsa-miR-149 BTAF1 miRanda miRanda
14034 chr10 93789395 93789395 1 + T C rs142894653 93789411 + 93789391 93789431 41 GATATAGCCAGATTCAAATAACATATGTACTCAATAGGTTT GATACAGCCAGATTCAAATAACATATGTACTCAATAGGTTT < 41bp 1 0.384741669128474 1 0.0108039677143097 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 BTAF1 ENSG00000095564 UTR3 Human protein_coding chr10:93789411 chr10:93789395 . . 0 hm6A_associated_SNPs_12330 0 0 1 2 93789395 93789418 mRNA hsa-miR-190b BTAF1 miRanda miRanda
14034 chr10 95288018 95288018 1 + A G rs574084114 95288007 + 95287987 95288027 41 TATTTCACATTTTGCATAAAACTGCCTATCTACCTTTGACA TATTTCACATTTTGCATAAAACTGCCTATCTGCCTTTGACA < 41bp 1 0.358317097806796 1 0.547902524471283 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288007 chr10:95288018 . . 0 hm6A_associated_SNPs_12342 0 0 1 3 95288013 95288032 mRNA hsa-miR-122 CEP55 miRanda miRanda
14034 chr10 95288018 95288018 1 + A G rs574084114 95288007 + 95287987 95288027 41 TATTTCACATTTTGCATAAAACTGCCTATCTACCTTTGACA TATTTCACATTTTGCATAAAACTGCCTATCTGCCTTTGACA < 41bp 1 0.358317097806796 1 0.547902524471283 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288007 chr10:95288018 . . 0 hm6A_associated_SNPs_12342 0 0 1 3 95288008 95288030 mRNA hsa-miR-130a CEP55 miRanda miRanda
14034 chr10 95288018 95288018 1 + A G rs574084114 95288007 + 95287987 95288027 41 TATTTCACATTTTGCATAAAACTGCCTATCTACCTTTGACA TATTTCACATTTTGCATAAAACTGCCTATCTGCCTTTGACA < 41bp 1 0.358317097806796 1 0.547902524471283 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288007 chr10:95288018 . . 0 hm6A_associated_SNPs_12342 0 0 1 3 95288008 95288030 mRNA hsa-miR-130b CEP55 miRanda miRanda
14034 chr10 95288018 95288018 1 + A G rs574084114 95288025 + 95288005 95288045 41 AAACTGCCTATCTACCTTTGACACTCCAGCATGCTAGTGAA AAACTGCCTATCTGCCTTTGACACTCCAGCATGCTAGTGAA < 41bp 1 0.605525990973188 1 0.793872892856598 experiment 0.788948018053625 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288025 chr10:95288018 . . 0 hm6A_associated_SNPs_12343 0 0 1 3 95288013 95288032 mRNA hsa-miR-122 CEP55 miRanda miRanda
14034 chr10 95288018 95288018 1 + A G rs574084114 95288025 + 95288005 95288045 41 AAACTGCCTATCTACCTTTGACACTCCAGCATGCTAGTGAA AAACTGCCTATCTGCCTTTGACACTCCAGCATGCTAGTGAA < 41bp 1 0.605525990973188 1 0.793872892856598 experiment 0.788948018053625 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288025 chr10:95288018 . . 0 hm6A_associated_SNPs_12343 0 0 1 3 95288008 95288030 mRNA hsa-miR-130a CEP55 miRanda miRanda
14034 chr10 95288018 95288018 1 + A G rs574084114 95288025 + 95288005 95288045 41 AAACTGCCTATCTACCTTTGACACTCCAGCATGCTAGTGAA AAACTGCCTATCTGCCTTTGACACTCCAGCATGCTAGTGAA < 41bp 1 0.605525990973188 1 0.793872892856598 experiment 0.788948018053625 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288025 chr10:95288018 . . 0 hm6A_associated_SNPs_12343 0 0 1 3 95288008 95288030 mRNA hsa-miR-130b CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288303 95288325 mRNA hsa-miR-302a CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288303 95288325 mRNA hsa-miR-302b CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288303 95288325 mRNA hsa-miR-302c CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288303 95288325 mRNA hsa-miR-302d CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288303 95288325 mRNA hsa-miR-372 CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288303 95288325 mRNA hsa-miR-373 CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288304 95288325 mRNA hsa-miR-520a-3p CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288304 95288325 mRNA hsa-miR-520c-3p CEP55 miRanda miRanda
14034 chr10 95288304 95288304 1 + G A rs12245643 95288295 + 95288275 95288315 41 ATAATTAACCAAGGATCTTAACTGTGTTCGCATTTTTTATC ATAATTAACCAAGGATCTTAACTGTGTTCACATTTTTTATC < 41bp 1 0.108967710062656 1 0.244101285934448 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 CEP55 ENSG00000138180 UTR3 Human protein_coding chr10:95288295 chr10:95288304 . . 0 hm6A_associated_SNPs_12344 0 0 1 9 95288304 95288325 mRNA hsa-miR-520d-3p CEP55 miRanda miRanda
14034 chr10 96361491 96361491 1 + A G rs113365793 96361489 + 96361469 96361509 41 CTTTTTTATTATATCAGTTGACATGTAACTAGTACCATGCG CTTTTTTATTATATCAGTTGACGTGTAACTAGTACCATGCG Direct Loss 1 0.488925478472118 1 0.401070326566696 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 HELLS ENSG00000244332 ncRNA_intronic Human sense_overlapping chr10:96361489 chr10:96361491 . . 0 hm6A_associated_SNPs_12346 0 0 1 2 96361472 96361495 mRNA hsa-miR-181a HELLS miRanda miRanda
14034 chr10 96361491 96361491 1 + A G rs113365793 96361489 + 96361469 96361509 41 CTTTTTTATTATATCAGTTGACATGTAACTAGTACCATGCG CTTTTTTATTATATCAGTTGACGTGTAACTAGTACCATGCG Direct Loss 1 0.488925478472118 1 0.401070326566696 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 23 HELLS ENSG00000244332 ncRNA_intronic Human sense_overlapping chr10:96361489 chr10:96361491 . . 0 hm6A_associated_SNPs_12346 0 0 1 2 96361470 96361491 mRNA hsa-miR-505 HELLS miRanda miRanda
14034 chr10 96361491 96361491 1 + A G rs113365793 96361496 + 96361476 96361516 41 ATTATATCAGTTGACATGTAACTAGTACCATGCGTACTTAA ATTATATCAGTTGACGTGTAACTAGTACCATGCGTACTTAA < 41bp 1 0.376727149497072 1 0.703020095825195 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 16 HELLS ENSG00000244332 ncRNA_intronic Human sense_overlapping chr10:96361496 chr10:96361491 . . 0 hm6A_associated_SNPs_12347 0 0 1 2 96361472 96361495 mRNA hsa-miR-181a HELLS miRanda miRanda
14034 chr10 96361491 96361491 1 + A G rs113365793 96361496 + 96361476 96361516 41 ATTATATCAGTTGACATGTAACTAGTACCATGCGTACTTAA ATTATATCAGTTGACGTGTAACTAGTACCATGCGTACTTAA < 41bp 1 0.376727149497072 1 0.703020095825195 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 16 HELLS ENSG00000244332 ncRNA_intronic Human sense_overlapping chr10:96361496 chr10:96361491 . . 0 hm6A_associated_SNPs_12347 0 0 1 2 96361470 96361491 mRNA hsa-miR-505 HELLS miRanda miRanda
14034 chr10 97818818 97818818 1 + G A rs148839265 97818838 + 97818818 97818858 41 GGGTGTGTTTTCAAATGAGAACATAATATAGCTCAGAATGA AGGTGTGTTTTCAAATGAGAACATAATATAGCTCAGAATGA < 41bp 1 0.3290385143703 1 0.0506183803081512 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 ENTPD1-AS1 ENSG00000226688 ncRNA_intronic Human antisense chr10:97818838 chr10:97818818 . . 0 hm6A_associated_SNPs_12353 0 0 1 2 97818803 97818826 mRNA hsa-miR-362-3p CCNJ miRanda miRanda
14034 chr10 97818818 97818818 1 + G A rs148839265 97818838 + 97818818 97818858 41 GGGTGTGTTTTCAAATGAGAACATAATATAGCTCAGAATGA AGGTGTGTTTTCAAATGAGAACATAATATAGCTCAGAATGA < 41bp 1 0.3290385143703 1 0.0506183803081512 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 ENTPD1-AS1 ENSG00000226688 ncRNA_intronic Human antisense chr10:97818838 chr10:97818818 . . 0 hm6A_associated_SNPs_12353 0 0 1 2 97818804 97818826 mRNA hsa-miR-329 CCNJ miRanda miRanda
14034 chr10 97819763 97819763 1 + T C rs2861239 97819759 + 97819739 97819779 41 GAAAAACCACTCAGGTAAGAACACTCACTCATGGCAGTTTT GAAAAACCACTCAGGTAAGAACACCCACTCATGGCAGTTTT < 41bp 1 0.304298301804498 1 0.142836183309555 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 ENTPD1-AS1 ENSG00000226688 ncRNA_intronic Human antisense chr10:97819759 chr10:97819763 . . 0 hm6A_associated_SNPs_12354 0 0 1 2 97819754 97819777 mRNA hsa-miR-217 CCNJ miRanda miRanda
14034 chr10 97819763 97819763 1 + T C rs2861239 97819759 + 97819739 97819779 41 GAAAAACCACTCAGGTAAGAACACTCACTCATGGCAGTTTT GAAAAACCACTCAGGTAAGAACACCCACTCATGGCAGTTTT < 41bp 1 0.304298301804498 1 0.142836183309555 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 ENTPD1-AS1 ENSG00000226688 ncRNA_intronic Human antisense chr10:97819759 chr10:97819763 . . 0 hm6A_associated_SNPs_12354 0 0 1 2 97819744 97819767 mRNA hsa-miR-142-3p CCNJ miRanda miRanda
14034 chr10 97820336 97820336 1 + T C rs553620300 97820332 + 97820312 97820352 41 TAGCTTTGGGGGGTGGGGGAACATTGTGTGGGTTTTGTTTT TAGCTTTGGGGGGTGGGGGAACATCGTGTGGGTTTTGTTTT < 41bp 1 0.450255413457325 1 0.0577257573604584 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 25 ENTPD1-AS1 ENSG00000226688 ncRNA_intronic Human antisense chr10:97820332 chr10:97820336 . . 0 hm6A_associated_SNPs_12355 0 0 1 1 97820334 97820356 mRNA hsa-miR-495 CCNJ miRanda miRanda
14034 chr10 97820339 97820339 1 + G T rs1047370 97820332 + 97820312 97820352 41 TAGCTTTGGGGGGTGGGGGAACATTGTGTGGGTTTTGTTTT TAGCTTTGGGGGGTGGGGGAACATTGTTTGGGTTTTGTTTT < 41bp 1 0.495262179574765 1 0.0596503913402557 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 ENTPD1-AS1 ENSG00000226688 ncRNA_intronic Human antisense chr10:97820332 chr10:97820339 . . 0 hm6A_associated_SNPs_12356 0 0 0 1 97820334 97820356 mRNA hsa-miR-495 CCNJ miRanda miRanda
14034 chr10 97920278 97920278 1 + T C rs41291608 97920259 + 97920239 97920279 41 ACTGAAACCAGTTTGTTATAACCCTCCTAAAACAACTTATG ACTGAAACCAGTTTGTTATAACCCTCCTAAAACAACTTACG < 41bp 1 0.258582052091181 1 0.957530498504639 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 40 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920259 chr10:97920278 . . 0 hm6A_associated_SNPs_12374 0 0 1 1 97920278 97920302 mRNA hsa-miR-455-5p ZNF518A miRanda miRanda
14034 chr10 97920889 97920889 1 + T C rs587759423 97920870 + 97920850 97920890 41 TTAGTAGAGGGTAATGGCTGACACCCCCATTCCCTCTCTTC TTAGTAGAGGGTAATGGCTGACACCCCCATTCCCTCTCTCC < 41bp 1 0.238028083653513 1 0.300414443016052 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 40 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920870 chr10:97920889 . . 0 hm6A_associated_SNPs_12375 0 0 1 1 97920879 97920901 mRNA hsa-miR-138 ZNF518A miRanda miRanda
14034 chr10 98715698 98715698 1 + A G rs145617106 98715710 + 98715690 98715730 41 GAGTGCCAATTACTGTACAAACTGGGTGAGCACTACTGCAT GAGTGCCAGTTACTGTACAAACTGGGTGAGCACTACTGCAT < 41bp 1 0.641578130652154 1 0.92592579126358 experiment 0.716843738695692 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 LCOR ENSG00000196233 UTR3 Human protein_coding chr10:98715710 chr10:98715698 . . 0 hm6A_associated_SNPs_12376 0 0 1 3 98715680 98715699 mRNA hsa-miR-96 LCOR miRanda miRanda
14034 chr10 98715698 98715698 1 + A G rs145617106 98715710 + 98715690 98715730 41 GAGTGCCAATTACTGTACAAACTGGGTGAGCACTACTGCAT GAGTGCCAGTTACTGTACAAACTGGGTGAGCACTACTGCAT < 41bp 1 0.641578130652154 1 0.92592579126358 experiment 0.716843738695692 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 LCOR ENSG00000196233 UTR3 Human protein_coding chr10:98715710 chr10:98715698 . . 0 hm6A_associated_SNPs_12376 0 0 1 3 98715680 98715700 mRNA hsa-miR-367 LCOR miRanda miRanda
14034 chr10 98715698 98715698 1 + A G rs145617106 98715710 + 98715690 98715730 41 GAGTGCCAATTACTGTACAAACTGGGTGAGCACTACTGCAT GAGTGCCAGTTACTGTACAAACTGGGTGAGCACTACTGCAT < 41bp 1 0.641578130652154 1 0.92592579126358 experiment 0.716843738695692 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 LCOR ENSG00000196233 UTR3 Human protein_coding chr10:98715710 chr10:98715698 . . 0 hm6A_associated_SNPs_12376 0 0 1 3 98715680 98715699 mRNA hsa-miR-1271 LCOR miRanda miRanda
14034 chr10 99080229 99080229 1 + A G rs184798749 99080210 + 99080190 99080230 41 TCGCGAGTGTTTCGCGGGTAACTGGGGTTGAGGGCCAAAAT TCGCGAGTGTTTCGCGGGTAACTGGGGTTGAGGGCCAAAGT < 41bp 1 0.186820607178239 1 0.984276235103607 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 FRAT1 ENSG00000165879 UTR3 Human protein_coding chr10:99080210 chr10:99080229 . . 0 hm6A_associated_SNPs_12380 0 0 1 1 99080224 99080245 mRNA hsa-miR-205 FRAT1 miRanda miRanda
14034 chr10 99192571 99192571 1 + G A rs541680619 99192591 + 99192571 99192611 41 GAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT AAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT < 41bp 1 0.685077725858548 1 0.959551215171814 experiment 0.629844548282905 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 PGAM1 ENSG00000171314 UTR3 Human protein_coding chr10:99192591 chr10:99192571 . . 0 hm6A_associated_SNPs_12384 0 0 0 5 99192562 99192586 mRNA hsa-miR-30a PGAM1 miRanda miRanda
14034 chr10 99192571 99192571 1 + G A rs541680619 99192591 + 99192571 99192611 41 GAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT AAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT < 41bp 1 0.685077725858548 1 0.959551215171814 experiment 0.629844548282905 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 PGAM1 ENSG00000171314 UTR3 Human protein_coding chr10:99192591 chr10:99192571 . . 0 hm6A_associated_SNPs_12384 0 0 0 5 99192566 99192586 mRNA hsa-miR-30c PGAM1 miRanda miRanda
14034 chr10 99192571 99192571 1 + G A rs541680619 99192591 + 99192571 99192611 41 GAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT AAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT < 41bp 1 0.685077725858548 1 0.959551215171814 experiment 0.629844548282905 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 PGAM1 ENSG00000171314 UTR3 Human protein_coding chr10:99192591 chr10:99192571 . . 0 hm6A_associated_SNPs_12384 0 0 0 5 99192565 99192586 mRNA hsa-miR-30d PGAM1 miRanda miRanda
14034 chr10 99192571 99192571 1 + G A rs541680619 99192591 + 99192571 99192611 41 GAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT AAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT < 41bp 1 0.685077725858548 1 0.959551215171814 experiment 0.629844548282905 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 PGAM1 ENSG00000171314 UTR3 Human protein_coding chr10:99192591 chr10:99192571 . . 0 hm6A_associated_SNPs_12384 0 0 0 5 99192565 99192586 mRNA hsa-miR-30b PGAM1 miRanda miRanda
14034 chr10 99192571 99192571 1 + G A rs541680619 99192591 + 99192571 99192611 41 GAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT AAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCT < 41bp 1 0.685077725858548 1 0.959551215171814 experiment 0.629844548282905 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 PGAM1 ENSG00000171314 UTR3 Human protein_coding chr10:99192591 chr10:99192571 . . 0 hm6A_associated_SNPs_12384 0 0 0 5 99192565 99192586 mRNA hsa-miR-30e PGAM1 miRanda miRanda
14034 chr10 99474483 99474483 1 + T A rs41290460 99474499 + 99474479 99474519 41 CTCTTCCCTTCCCTGCTGAGACTAAGACGTGGACAGGGGCC CTCTACCCTTCCCTGCTGAGACTAAGACGTGGACAGGGGCC < 41bp 1 0.785291939697007 1 0.993137896060944 experiment 0.429416120605987 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 5 MARVELD1 ENSG00000155254 UTR3 Human protein_coding chr10:99474499 chr10:99474483 . . 0 hm6A_associated_SNPs_12393 0 0 1 1 99474477 99474497 mRNA hsa-miR-214 MARVELD1 miRanda miRanda
14034 chr10 99474484 99474484 1 + C A rs528494697 99474499 + 99474479 99474519 41 CTCTTCCCTTCCCTGCTGAGACTAAGACGTGGACAGGGGCC CTCTTACCTTCCCTGCTGAGACTAAGACGTGGACAGGGGCC < 41bp 1 0.785214180930772 1 0.992747128009796 experiment 0.429571638138455 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 6 MARVELD1 ENSG00000155254 UTR3 Human protein_coding chr10:99474499 chr10:99474484 . . 0 hm6A_associated_SNPs_12394 0 0 1 1 99474477 99474497 mRNA hsa-miR-214 MARVELD1 miRanda miRanda
14034 chr10 101151784 101151784 1 + G A rs548143212 101151785 + 101151765 101151805 41 AAGATTAGTTCAGGGGATGGACCAAGAATTTCCCCCAGAGC AAGATTAGTTCAGGGGATGAACCAAGAATTTCCCCCAGAGC < 41bp 1 0.333841876187401 1 0.0854235887527466 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 CNNM1 ENSG00000119946 UTR3 Human protein_coding chr10:101151785 chr10:101151784 . . 0 hm6A_associated_SNPs_12416 0 0 0 2 101151766 101151790 mRNA hsa-miR-133a CNNM1 miRanda miRanda
14034 chr10 101151784 101151784 1 + G A rs548143212 101151785 + 101151765 101151805 41 AAGATTAGTTCAGGGGATGGACCAAGAATTTCCCCCAGAGC AAGATTAGTTCAGGGGATGAACCAAGAATTTCCCCCAGAGC < 41bp 1 0.333841876187401 1 0.0854235887527466 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 CNNM1 ENSG00000119946 UTR3 Human protein_coding chr10:101151785 chr10:101151784 . . 0 hm6A_associated_SNPs_12416 0 0 0 2 101151766 101151790 mRNA hsa-miR-133b CNNM1 miRanda miRanda
14034 chr10 101515777 101515777 1 + T C rs191060908 101515784 + 101515764 101515804 41 TCAGTGGAATTAATTGATGAACTGGGAAAATTTTAACTGCA TCAGTGGAATTAACTGATGAACTGGGAAAATTTTAACTGCA < 41bp 1 0.475268665397754 1 0.937230110168457 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 CUTC ENSG00000119929 UTR3 Human protein_coding chr10:101515784 chr10:101515777 . . 0 hm6A_associated_SNPs_12423 0 0 1 2 101515768 101515790 mRNA hsa-miR-145 CUTC miRanda miRanda
14034 chr10 101515777 101515777 1 + T C rs191060908 101515784 + 101515764 101515804 41 TCAGTGGAATTAATTGATGAACTGGGAAAATTTTAACTGCA TCAGTGGAATTAACTGATGAACTGGGAAAATTTTAACTGCA < 41bp 1 0.475268665397754 1 0.937230110168457 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 CUTC ENSG00000119929 UTR3 Human protein_coding chr10:101515784 chr10:101515777 . . 0 hm6A_associated_SNPs_12423 0 0 1 2 101515767 101515792 mRNA hsa-miR-384 CUTC miRanda miRanda
14034 chr10 102123345 102123345 1 + C T rs200173927 102123344 + 102123324 102123364 41 GCCTGCTTGATAATATATAAACAATAAAAACAACTTTCACT GCCTGCTTGATAATATATAAATAATAAAAACAACTTTCACT Direct Loss 1 0.311228501502486 1 0.0488110482692719 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 22 SCD ENSG00000256545 ncRNA_exonic Human other chr10:102123344 chr10:102123345 . . 0 hm6A_associated_SNPs_12438 0 0 1 1 102123339 102123360 mRNA hsa-miR-382 SCD miRanda miRanda
14034 chr10 102123345 102123345 1 + C T rs200173927 102123353 + 102123333 102123373 41 ATAATATATAAACAATAAAAACAACTTTCACTTCTTCCTAT ATAATATATAAATAATAAAAACAACTTTCACTTCTTCCTAT < 41bp 1 0.364492090489454 1 0.0361650586128235 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 SCD ENSG00000256545 ncRNA_exonic Human other chr10:102123353 chr10:102123345 . . 0 hm6A_associated_SNPs_12439 0 0 1 1 102123339 102123360 mRNA hsa-miR-382 SCD miRanda miRanda
14034 chr10 102124467 102124467 1 + A G rs147598044 102124483 + 102124463 102124503 41 GGATATAGTAGTTACTTGTGACAAGAATAATTTTGGAATAA GGATGTAGTAGTTACTTGTGACAAGAATAATTTTGGAATAA < 41bp 1 0.471157116701924 1 0.436056673526764 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 SCD ENSG00000099194 UTR3 Human protein_coding chr10:102124483 chr10:102124467 . . 0 hm6A_associated_SNPs_12446 0 0 1 2 102124461 102124484 mRNA hsa-miR-27a SCD miRanda miRanda
14034 chr10 102124467 102124467 1 + A G rs147598044 102124483 + 102124463 102124503 41 GGATATAGTAGTTACTTGTGACAAGAATAATTTTGGAATAA GGATGTAGTAGTTACTTGTGACAAGAATAATTTTGGAATAA < 41bp 1 0.471157116701924 1 0.436056673526764 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 SCD ENSG00000099194 UTR3 Human protein_coding chr10:102124483 chr10:102124467 . . 0 hm6A_associated_SNPs_12446 0 0 1 2 102124463 102124484 mRNA hsa-miR-27b SCD miRanda miRanda
14034 chr10 102133540 102133540 1 + G A rs147024147 102133529 + 102133509 102133549 41 ATCGCTTCCCTGCTGGGAAGACAAATGAGGCGCTTTAGCCG ATCGCTTCCCTGCTGGGAAGACAAATGAGGCACTTTAGCCG < 41bp 1 0.0707176344970259 1 0.746170520782471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 OLMALINC ENSG00000235823 ncRNA_exonic Human lincRNA chr10:102133529 chr10:102133540 . . 0 hm6A_associated_SNPs_12447 0 0 0 5 102133524 102133545 lncRNA hsa-miR-518a-3p OLMALINC miRanda starBase2
14034 chr10 102133540 102133540 1 + G A rs147024147 102133529 + 102133509 102133549 41 ATCGCTTCCCTGCTGGGAAGACAAATGAGGCGCTTTAGCCG ATCGCTTCCCTGCTGGGAAGACAAATGAGGCACTTTAGCCG < 41bp 1 0.0707176344970259 1 0.746170520782471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 OLMALINC ENSG00000235823 ncRNA_exonic Human lincRNA chr10:102133529 chr10:102133540 . . 0 hm6A_associated_SNPs_12447 0 0 0 5 102133525 102133545 lncRNA hsa-miR-518b OLMALINC miRanda starBase2
14034 chr10 102133540 102133540 1 + G A rs147024147 102133529 + 102133509 102133549 41 ATCGCTTCCCTGCTGGGAAGACAAATGAGGCGCTTTAGCCG ATCGCTTCCCTGCTGGGAAGACAAATGAGGCACTTTAGCCG < 41bp 1 0.0707176344970259 1 0.746170520782471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 OLMALINC ENSG00000235823 ncRNA_exonic Human lincRNA chr10:102133529 chr10:102133540 . . 0 hm6A_associated_SNPs_12447 0 0 0 5 102133523 102133545 lncRNA hsa-miR-518c-3p OLMALINC miRanda starBase2
14034 chr10 102133540 102133540 1 + G A rs147024147 102133529 + 102133509 102133549 41 ATCGCTTCCCTGCTGGGAAGACAAATGAGGCGCTTTAGCCG ATCGCTTCCCTGCTGGGAAGACAAATGAGGCACTTTAGCCG < 41bp 1 0.0707176344970259 1 0.746170520782471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 OLMALINC ENSG00000235823 ncRNA_exonic Human lincRNA chr10:102133529 chr10:102133540 . . 0 hm6A_associated_SNPs_12447 0 0 0 5 102133526 102133545 lncRNA hsa-miR-518d-3p OLMALINC miRanda starBase2
14034 chr10 102133540 102133540 1 + G A rs147024147 102133529 + 102133509 102133549 41 ATCGCTTCCCTGCTGGGAAGACAAATGAGGCGCTTTAGCCG ATCGCTTCCCTGCTGGGAAGACAAATGAGGCACTTTAGCCG < 41bp 1 0.0707176344970259 1 0.746170520782471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 OLMALINC ENSG00000235823 ncRNA_exonic Human lincRNA chr10:102133529 chr10:102133540 . . 0 hm6A_associated_SNPs_12447 0 0 0 5 102133525 102133545 lncRNA hsa-miR-518f-3p OLMALINC miRanda starBase2
14034 chr10 102744783 102744783 1 + T C rs541757083 102744793 + 102744773 102744813 41 CTGTTGGGTTTAGTCCGTGGACATTTCAGAGGGAGATCCCC CTGTTGGGTTCAGTCCGTGGACATTTCAGAGGGAGATCCCC < 41bp 1 0.420785861945925 1 0.647283911705017 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 SEMA4G ENSG00000236662 ncRNA_intronic Human antisense chr10:102744793 chr10:102744783 . . 0 hm6A_associated_SNPs_12455 0 0 1 1 102744779 102744801 mRNA hsa-miR-203 SEMA4G miRanda miRanda
14034 chr10 102753568 102753568 1 + C T rs41291468 102753566 + 102753546 102753586 41 AATGAACAAATTAGCAGAAAACCTAGTTTTAGTGAAAAATG AATGAACAAATTAGCAGAAAACTTAGTTTTAGTGAAAAATG < 41bp 1 0.716443100011395 1 0.0934004187583923 experiment 0.56711379997721 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 TWNK ENSG00000107815 UTR3 Human protein_coding chr10:102753566 chr10:102753568 . . 0 hm6A_associated_SNPs_12460 4 0 1 2 102753566 102753591 mRNA hsa-miR-103 C10orf2 miRanda miRanda
14034 chr10 102753568 102753568 1 + C T rs41291468 102753566 + 102753546 102753586 41 AATGAACAAATTAGCAGAAAACCTAGTTTTAGTGAAAAATG AATGAACAAATTAGCAGAAAACTTAGTTTTAGTGAAAAATG < 41bp 1 0.716443100011395 1 0.0934004187583923 experiment 0.56711379997721 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 TWNK ENSG00000107815 UTR3 Human protein_coding chr10:102753566 chr10:102753568 . . 0 hm6A_associated_SNPs_12460 4 0 1 2 102753566 102753591 mRNA hsa-miR-107 C10orf2 miRanda miRanda
14034 chr10 103922896 103922896 1 + G T rs7897 103922892 + 103922872 103922912 41 ACAGTATAGAGAACAAAATGACATGAGTTTGAAAAATACAT ACAGTATAGAGAACAAAATGACATTAGTTTGAAAAATACAT < 41bp 1 0.551226132956754 1 0.403028815984726 experiment 0.897547734086492 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 NOLC1 ENSG00000166197 UTR3 Human protein_coding chr10:103922892 chr10:103922896 . . 0 hm6A_associated_SNPs_12477 0 0 1 2 103922893 103922916 mRNA hsa-miR-190 NOLC1 miRanda miRanda
14034 chr10 103922896 103922896 1 + G T rs7897 103922892 + 103922872 103922912 41 ACAGTATAGAGAACAAAATGACATGAGTTTGAAAAATACAT ACAGTATAGAGAACAAAATGACATTAGTTTGAAAAATACAT < 41bp 1 0.551226132956754 1 0.403028815984726 experiment 0.897547734086492 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 NOLC1 ENSG00000166197 UTR3 Human protein_coding chr10:103922892 chr10:103922896 . . 0 hm6A_associated_SNPs_12477 0 0 1 2 103922896 103922916 mRNA hsa-miR-190b NOLC1 miRanda miRanda
14034 chr10 104574865 104574865 1 + C T rs537789530 104574879 + 104574859 104574899 41 ACCACACGTCTGGAGCACAGACAGGCCTCTCAAGGTCATTG ACCACATGTCTGGAGCACAGACAGGCCTCTCAAGGTCATTG < 41bp 1 0.730716984916833 1 0.702062726020813 experiment 0.538566030166334 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 WBP1L ENSG00000166272 UTR3 Human protein_coding chr10:104574879 chr10:104574865 . . 0 hm6A_associated_SNPs_12493 0 0 0 1 104574851 104574879 mRNA hsa-miR-149 C10orf26 miRanda miRanda
14034 chr10 104575852 104575852 1 + C T rs14849 104575832 + 104575812 104575852 41 CAGAAGATTTGCAAATGCGAACACATTCCTGTGTGAGGCAC CAGAAGATTTGCAAATGCGAACACATTCCTGTGTGAGGCAT < 41bp 1 0.790145322495799 1 0.152088642120361 experiment 0.419709355008402 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 WBP1L ENSG00000166272 UTR3 Human protein_coding chr10:104575832 chr10:104575852 . . 0 hm6A_associated_SNPs_12499 0 0 1 1 104575848 104575873 mRNA hsa-miR-200c C10orf26 miRanda miRanda
14034 chr10 105049751 105049751 1 + T C rs55996880 105049771 + 105049751 105049791 41 TTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTGCC CTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTGCC < 41bp 1 0.733090560665289 1 0.763451457023621 experiment 0.533818878669423 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 INA ENSG00000148798 UTR3 Human protein_coding chr10:105049771 chr10:105049751 . . 0 hm6A_associated_SNPs_12505 0 0 1 1 105049745 105049767 mRNA hsa-miR-216b INA miRanda miRanda
14034 chr10 105049789 105049789 1 + G A rs546657888 105049771 + 105049751 105049791 41 TTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTGCC TTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTACC < 41bp 1 0.741542100016784 1 0.696910321712494 experiment 0.516915799966433 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 INA ENSG00000148798 UTR3 Human protein_coding chr10:105049771 chr10:105049789 . . 0 hm6A_associated_SNPs_12506 0 0 1 3 105049771 105049792 mRNA hsa-miR-34c-5p INA miRanda miRanda
14034 chr10 105049789 105049789 1 + G A rs546657888 105049771 + 105049751 105049791 41 TTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTGCC TTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTACC < 41bp 1 0.741542100016784 1 0.696910321712494 experiment 0.516915799966433 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 INA ENSG00000148798 UTR3 Human protein_coding chr10:105049771 chr10:105049789 . . 0 hm6A_associated_SNPs_12506 0 0 1 3 105049770 105049792 mRNA hsa-miR-449a INA miRanda miRanda
14034 chr10 105049789 105049789 1 + G A rs546657888 105049771 + 105049751 105049791 41 TTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTGCC TTGCTAGAAGTAGATTCTGGACAGTCAGCTCTTCATCTACC < 41bp 1 0.741542100016784 1 0.696910321712494 experiment 0.516915799966433 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 INA ENSG00000148798 UTR3 Human protein_coding chr10:105049771 chr10:105049789 . . 0 hm6A_associated_SNPs_12506 0 0 1 3 105049770 105049792 mRNA hsa-miR-449b INA miRanda miRanda
14034 chr10 105148650 105148650 1 + A C rs57707166 105148662 + 105148642 105148682 41 CCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTAC CCTAGTACCCTTGAAGTCAGACAGACATTTCAGTTGCTTAC < 41bp 1 0.467271033870806 1 0.0814812481403351 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 TAF5 ENSG00000148835 UTR3 Human protein_coding chr10:105148662 chr10:105148650 . . 0 hm6A_associated_SNPs_12511 0 0 1 3 105148635 105148656 mRNA hsa-miR-26a TAF5 miRanda miRanda
14034 chr10 105148650 105148650 1 + A C rs57707166 105148662 + 105148642 105148682 41 CCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTAC CCTAGTACCCTTGAAGTCAGACAGACATTTCAGTTGCTTAC < 41bp 1 0.467271033870806 1 0.0814812481403351 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 TAF5 ENSG00000148835 UTR3 Human protein_coding chr10:105148662 chr10:105148650 . . 0 hm6A_associated_SNPs_12511 0 0 1 3 105148636 105148656 mRNA hsa-miR-26b TAF5 miRanda miRanda
14034 chr10 105148650 105148650 1 + A C rs57707166 105148662 + 105148642 105148682 41 CCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTAC CCTAGTACCCTTGAAGTCAGACAGACATTTCAGTTGCTTAC < 41bp 1 0.467271033870806 1 0.0814812481403351 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 TAF5 ENSG00000148835 UTR3 Human protein_coding chr10:105148662 chr10:105148650 . . 0 hm6A_associated_SNPs_12511 0 0 1 3 105148640 105148656 mRNA hsa-miR-1297 TAF5 miRanda miRanda
14034 chr10 105351349 105351349 1 + C G rs4918028 105351348 + 105351328 105351368 41 CCCAGCCCTACCAATCATGAACTGGAACTCCATAAGGAGGG CCCAGCCCTACCAATCATGAAGTGGAACTCCATAAGGAGGG Direct Loss 1 0.147839176321527 1 0.520111083984375 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NEURL1 ENSG00000107954 UTR3 Human protein_coding chr10:105351348 chr10:105351349 . . 0 hm6A_associated_SNPs_12522 0 0 0 1 105351332 105351354 mRNA hsa-miR-145 NEURL miRanda miRanda
14034 chr10 105786766 105786766 1 + G C rs75214523 105786753 + 105786733 105786773 41 CAGGTCAGACAGTATTATAAACTGTACTTTGCTGTCTGAGA CAGGTCAGACAGTATTATAAACTGTACTTTGCTCTCTGAGA < 41bp 1 0.209413113109886 1 0.806376218795776 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 34 SLK ENSG00000065613 UTR3 Human protein_coding chr10:105786753 chr10:105786766 . . 0 hm6A_associated_SNPs_12525 0 0 1 1 105786757 105786781 mRNA hsa-miR-210 SLK miRanda miRanda
14034 chr10 112044895 112044895 1 + C G rs139187896 112044877 + 112044857 112044897 41 CAAAACAAAACTATACTTGAACAAAAGGGTCAGAGGACCTG CAAAACAAAACTATACTTGAACAAAAGGGTCAGAGGACGTG < 41bp 1 0.695133526352032 1 0.0469620227813721 experiment 0.609732947295936 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112044877 chr10:112044895 . . 0 hm6A_associated_SNPs_12528 0 0 1 1 112044891 112044912 mRNA hsa-miR-137 MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045936 112045959 mRNA hsa-miR-302a MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045937 112045959 mRNA hsa-miR-302b MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045937 112045959 mRNA hsa-miR-302c MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045937 112045959 mRNA hsa-miR-302d MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045938 112045959 mRNA hsa-miR-372 MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045939 112045959 mRNA hsa-miR-373 MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045938 112045959 mRNA hsa-miR-520e MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045938 112045959 mRNA hsa-miR-520a-3p MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045939 112045959 mRNA hsa-miR-520b MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045938 112045959 mRNA hsa-miR-520c-3p MXI1 miRanda miRanda
14034 chr10 112045941 112045941 1 + A G rs545257076 112045922 + 112045902 112045942 41 CCATCTGATATCTATAGTAGACACACTATCATAGTTAACAT CCATCTGATATCTATAGTAGACACACTATCATAGTTAACGT < 41bp 1 0.16800255695362 1 0.245581448078156 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MXI1 ENSG00000119950 UTR3 Human protein_coding chr10:112045922 chr10:112045941 . . 0 hm6A_associated_SNPs_12532 0 0 1 11 112045938 112045959 mRNA hsa-miR-520d-3p MXI1 miRanda miRanda
14034 chr10 112598995 112598995 1 + G A rs540217875 112598986 + 112598966 112599006 41 TCAGGGTTTCCCATTCTTGGACAGTCCGAGGCTGTGACCTG TCAGGGTTTCCCATTCTTGGACAGTCCGAAGCTGTGACCTG < 41bp 1 0.141595295300518 1 0.929830431938171 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RBM20 ENSG00000203867 UTR3 Human protein_coding chr10:112598986 chr10:112598995 . . 0 hm6A_associated_SNPs_12538 1 0 1 2 112598989 112599009 mRNA hsa-miR-212 RBM20 miRanda miRanda
14034 chr10 112598995 112598995 1 + G A rs540217875 112598986 + 112598966 112599006 41 TCAGGGTTTCCCATTCTTGGACAGTCCGAGGCTGTGACCTG TCAGGGTTTCCCATTCTTGGACAGTCCGAAGCTGTGACCTG < 41bp 1 0.141595295300518 1 0.929830431938171 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RBM20 ENSG00000203867 UTR3 Human protein_coding chr10:112598986 chr10:112598995 . . 0 hm6A_associated_SNPs_12538 1 0 1 2 112598988 112599009 mRNA hsa-miR-132 RBM20 miRanda miRanda
14034 chr10 112772534 112772534 1 + C A rs372493479 112772521 + 112772501 112772541 41 ATCATAAACTACAGTAGGTAACTTTAAGGATTTCTTCCTAT ATCATAAACTACAGTAGGTAACTTTAAGGATTTATTCCTAT < 41bp 1 0.234459908981397 1 0.0714560747146606 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 SHOC2 ENSG00000108061 UTR3 Human protein_coding chr10:112772521 chr10:112772534 . . 0 hm6A_associated_SNPs_12547 1 0 1 2 112772529 112772550 mRNA hsa-miR-381 SHOC2 miRanda miRanda
14034 chr10 112772534 112772534 1 + C A rs372493479 112772521 + 112772501 112772541 41 ATCATAAACTACAGTAGGTAACTTTAAGGATTTCTTCCTAT ATCATAAACTACAGTAGGTAACTTTAAGGATTTATTCCTAT < 41bp 1 0.234459908981397 1 0.0714560747146606 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 SHOC2 ENSG00000108061 UTR3 Human protein_coding chr10:112772521 chr10:112772534 . . 0 hm6A_associated_SNPs_12547 1 0 1 2 112772529 112772550 mRNA hsa-miR-300 SHOC2 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187920 114187941 mRNA hsa-miR-148a ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187921 114187941 mRNA hsa-miR-152 ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187919 114187941 mRNA hsa-miR-302a ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187919 114187941 mRNA hsa-miR-302b ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187919 114187941 mRNA hsa-miR-302c ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187919 114187941 mRNA hsa-miR-302d ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187918 114187941 mRNA hsa-miR-372 ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187914 114187941 mRNA hsa-miR-373 ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187920 114187941 mRNA hsa-miR-148b ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187920 114187941 mRNA hsa-miR-520e ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187919 114187941 mRNA hsa-miR-520a-3p ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187921 114187941 mRNA hsa-miR-520b ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187917 114187941 mRNA hsa-miR-520c-3p ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187917 114187941 mRNA hsa-miR-520d-3p ACSL5 miRanda miRanda
14034 chr10 114187931 114187931 1 + G T rs115743554 114187913 + 114187893 114187933 41 TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAAGCA TTGACAGGTGGGCCCAGTGAACTTTTCCAGTAAATGAATCA < 41bp 1 0.228654196538688 1 0.932291090488434 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 ACSL5 ENSG00000197142 UTR3 Human protein_coding chr10:114187913 chr10:114187931 . . 0 hm6A_associated_SNPs_12549 0 0 0 15 114187925 114187941 mRNA hsa-miR-302e ACSL5 miRanda miRanda
14034 chr10 114575466 114575466 1 + G A rs149267139 114575481 + 114575461 114575501 41 GGGCCGTGGTTTGGGAGAGGACATGATGAGTCAGTCACGAG GGGCCATGGTTTGGGAGAGGACATGATGAGTCAGTCACGAG < 41bp 1 0.687826359288523 1 0.902669787406921 experiment 0.624347281422955 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 6 VTI1A ENSG00000151532 UTR3 Human protein_coding chr10:114575481 chr10:114575466 . . 0 hm6A_associated_SNPs_12550 0 0 1 1 114575457 114575478 mRNA hsa-miR-150 VTI1A miRanda miRanda
14034 chr10 115348693 115348693 1 - A G rs138944153 115348680 - 115348660 115348700 41 AGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGA AGGAAGTCTGTTCACCAGAGACAGGCTTCAGATGGCTTTGA < 41bp 1 0.070957024846805 1 0.0221099555492401 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 8 HABP2;NRAP ENSG00000148702;ENSG00000197893 UTR3 Human other chr10:115348680 chr10:115348693 . . 0 hm6A_associated_SNPs_12569 0 0 0 1 115348688 115348708 mRNA hsa-miR-495 NRAP miRanda miRanda
14034 chr10 115489484 115489484 1 + A G rs148146424 115489504 + 115489484 115489524 41 ATAATGTTATTCATTTGGTGACTGTGTAACTTTCTCTTAAG GTAATGTTATTCATTTGGTGACTGTGTAACTTTCTCTTAAG < 41bp 1 0.482591755574097 1 0.499545186758041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115489504 chr10:115489484 . . 0 hm6A_associated_SNPs_12570 0 0 1 2 115489483 115489507 mRNA hsa-miR-29b CASP7 miRanda miRanda
14034 chr10 115489484 115489484 1 + A G rs148146424 115489504 + 115489484 115489524 41 ATAATGTTATTCATTTGGTGACTGTGTAACTTTCTCTTAAG GTAATGTTATTCATTTGGTGACTGTGTAACTTTCTCTTAAG < 41bp 1 0.482591755574097 1 0.499545186758041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115489504 chr10:115489484 . . 0 hm6A_associated_SNPs_12570 0 0 1 2 115489471 115489492 mRNA hsa-miR-543 CASP7 miRanda miRanda
14034 chr10 115490073 115490073 1 + A G rs116185385 115490066 + 115490046 115490086 41 GCTGCCTAGTGGGAGTTAGGACCACCAATGGATTGTGGAAA GCTGCCTAGTGGGAGTTAGGACCACCAGTGGATTGTGGAAA < 41bp 1 0.445669618022667 1 0.871197581291199 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115490066 chr10:115490073 . . 0 hm6A_associated_SNPs_12573 0 0 1 1 115490071 115490093 mRNA hsa-miR-136 CASP7 miRanda miRanda
14034 chr10 115490109 115490109 1 + G A rs1127687 115490098 + 115490078 115490118 41 TTGTGGAAAATGGAGCCATGACAAGAACAAAGCCACTGACT TTGTGGAAAATGGAGCCATGACAAGAACAAAACCACTGACT < 41bp 1 0.658715394927341 1 0.953557789325714 experiment 0.682569210145318 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115490098 chr10:115490109 . . 0 hm6A_associated_SNPs_12574 0 0 1 2 115490099 115490121 mRNA hsa-miR-27a CASP7 miRanda miRanda
14034 chr10 115490109 115490109 1 + G A rs1127687 115490098 + 115490078 115490118 41 TTGTGGAAAATGGAGCCATGACAAGAACAAAGCCACTGACT TTGTGGAAAATGGAGCCATGACAAGAACAAAACCACTGACT < 41bp 1 0.658715394927341 1 0.953557789325714 experiment 0.682569210145318 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115490098 chr10:115490109 . . 0 hm6A_associated_SNPs_12574 0 0 1 2 115490099 115490121 mRNA hsa-miR-27b CASP7 miRanda miRanda
14034 chr10 115490109 115490109 1 + G A rs1127687 115490104 + 115490084 115490124 41 AAAATGGAGCCATGACAAGAACAAAGCCACTGACTGAGATG AAAATGGAGCCATGACAAGAACAAAACCACTGACTGAGATG < 41bp 1 0.749366445614995 1 0.974226832389832 experiment 0.501267108770009 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115490104 chr10:115490109 . . 0 hm6A_associated_SNPs_12575 0 0 1 2 115490099 115490121 mRNA hsa-miR-27a CASP7 miRanda miRanda
14034 chr10 115490109 115490109 1 + G A rs1127687 115490104 + 115490084 115490124 41 AAAATGGAGCCATGACAAGAACAAAGCCACTGACTGAGATG AAAATGGAGCCATGACAAGAACAAAACCACTGACTGAGATG < 41bp 1 0.749366445614995 1 0.974226832389832 experiment 0.501267108770009 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115490104 chr10:115490109 . . 0 hm6A_associated_SNPs_12575 0 0 1 2 115490099 115490121 mRNA hsa-miR-27b CASP7 miRanda miRanda
14034 chr10 115490109 115490109 1 + G A rs1127687 115490116 + 115490096 115490136 41 TGACAAGAACAAAGCCACTGACTGAGATGGAGTGAGCTGAG TGACAAGAACAAAACCACTGACTGAGATGGAGTGAGCTGAG < 41bp 1 0.786361180851227 1 0.937701821327209 experiment 0.427277638297547 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115490116 chr10:115490109 . . 0 hm6A_associated_SNPs_12576 0 0 1 2 115490099 115490121 mRNA hsa-miR-27a CASP7 miRanda miRanda
14034 chr10 115490109 115490109 1 + G A rs1127687 115490116 + 115490096 115490136 41 TGACAAGAACAAAGCCACTGACTGAGATGGAGTGAGCTGAG TGACAAGAACAAAACCACTGACTGAGATGGAGTGAGCTGAG < 41bp 1 0.786361180851227 1 0.937701821327209 experiment 0.427277638297547 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115490116 chr10:115490109 . . 0 hm6A_associated_SNPs_12576 0 0 1 2 115490099 115490121 mRNA hsa-miR-27b CASP7 miRanda miRanda
14034 chr10 116621591 116621591 1 + C T rs116152282 116621580 + 116621560 116621600 41 GGAAATAAGCATTTCTAATGACTGTGAAAAGCTGCAATATT GGAAATAAGCATTTCTAATGACTGTGAAAAGTTGCAATATT < 41bp 1 0.709514824082308 1 0.958140730857849 experiment 0.580970351835384 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 FAM160B1 ENSG00000151553 UTR3 Human protein_coding chr10:116621580 chr10:116621591 . . 0 hm6A_associated_SNPs_12586 0 0 1 4 116621576 116621598 mRNA hsa-miR-25 FAM160B1 miRanda miRanda
14034 chr10 116621591 116621591 1 + C T rs116152282 116621580 + 116621560 116621600 41 GGAAATAAGCATTTCTAATGACTGTGAAAAGCTGCAATATT GGAAATAAGCATTTCTAATGACTGTGAAAAGTTGCAATATT < 41bp 1 0.709514824082308 1 0.958140730857849 experiment 0.580970351835384 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 FAM160B1 ENSG00000151553 UTR3 Human protein_coding chr10:116621580 chr10:116621591 . . 0 hm6A_associated_SNPs_12586 0 0 1 4 116621576 116621598 mRNA hsa-miR-32 FAM160B1 miRanda miRanda
14034 chr10 116621591 116621591 1 + C T rs116152282 116621580 + 116621560 116621600 41 GGAAATAAGCATTTCTAATGACTGTGAAAAGCTGCAATATT GGAAATAAGCATTTCTAATGACTGTGAAAAGTTGCAATATT < 41bp 1 0.709514824082308 1 0.958140730857849 experiment 0.580970351835384 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 FAM160B1 ENSG00000151553 UTR3 Human protein_coding chr10:116621580 chr10:116621591 . . 0 hm6A_associated_SNPs_12586 0 0 1 4 116621576 116621598 mRNA hsa-miR-92a FAM160B1 miRanda miRanda
14034 chr10 116621591 116621591 1 + C T rs116152282 116621580 + 116621560 116621600 41 GGAAATAAGCATTTCTAATGACTGTGAAAAGCTGCAATATT GGAAATAAGCATTTCTAATGACTGTGAAAAGTTGCAATATT < 41bp 1 0.709514824082308 1 0.958140730857849 experiment 0.580970351835384 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 FAM160B1 ENSG00000151553 UTR3 Human protein_coding chr10:116621580 chr10:116621591 . . 0 hm6A_associated_SNPs_12586 0 0 1 4 116621576 116621598 mRNA hsa-miR-92b FAM160B1 miRanda miRanda
14034 chr10 116736936 116736936 1 + A T rs41299149 116736921 + 116736901 116736941 41 CTTTTTCTTTTATGTTTAAAACTGAAGTTTTGCCAAATGGG CTTTTTCTTTTATGTTTAAAACTGAAGTTTTGCCATATGGG < 41bp 1 0.028217957040564 1 0.0113133788108826 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TRUB1 ENSG00000165832 UTR3 Human protein_coding chr10:116736921 chr10:116736936 . . 0 hm6A_associated_SNPs_12589 0 0 1 3 116736914 116736937 mRNA hsa-miR-182 TRUB1 miRanda miRanda
14034 chr10 116736936 116736936 1 + A T rs41299149 116736921 + 116736901 116736941 41 CTTTTTCTTTTATGTTTAAAACTGAAGTTTTGCCAAATGGG CTTTTTCTTTTATGTTTAAAACTGAAGTTTTGCCATATGGG < 41bp 1 0.028217957040564 1 0.0113133788108826 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TRUB1 ENSG00000165832 UTR3 Human protein_coding chr10:116736921 chr10:116736936 . . 0 hm6A_associated_SNPs_12589 0 0 1 3 116736920 116736943 mRNA hsa-miR-211 TRUB1 miRanda miRanda
14034 chr10 116736936 116736936 1 + A T rs41299149 116736921 + 116736901 116736941 41 CTTTTTCTTTTATGTTTAAAACTGAAGTTTTGCCAAATGGG CTTTTTCTTTTATGTTTAAAACTGAAGTTTTGCCATATGGG < 41bp 1 0.028217957040564 1 0.0113133788108826 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TRUB1 ENSG00000165832 UTR3 Human protein_coding chr10:116736921 chr10:116736936 . . 0 hm6A_associated_SNPs_12589 0 0 1 3 116736932 116736956 mRNA hsa-miR-194 TRUB1 miRanda miRanda
14034 chr10 119857787 119857787 1 + G A rs114722188 119857773 + 119857753 119857793 41 TTTTTAAACAAGTACACTGGACATTTCTAAAGCTGGCTAAA TTTTTAAACAAGTACACTGGACATTTCTAAAGCTAGCTAAA < 41bp 1 0.0547792399089097 1 0.823580980300903 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 CASC2 ENSG00000177640 ncRNA_exonic Human antisense chr10:119857773 chr10:119857787 . . 0 hm6A_associated_SNPs_12591 0 0 0 1 119857782 119857801 mRNA hsa-miR-371-5p CASC2 miRanda miRanda
14034 chr10 121693246 121693246 1 + A G rs34826964 121693244 + 121693224 121693264 41 TACTTAAAGAAATTTATCGAACAATGAACATTAGTCCAGAA TACTTAAAGAAATTTATCGAACGATGAACATTAGTCCAGAA Direct Loss 1 0.58262721999103 1 0.797771573066711 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121693244 chr10:121693246 synonymous SNV . 0 hm6A_associated_SNPs_12600 0 0 1 3 121693227 121693248 mRNA hsa-miR-375 SEC23IP miRanda miRanda
14034 chr10 121693246 121693246 1 + A G rs34826964 121693244 + 121693224 121693264 41 TACTTAAAGAAATTTATCGAACAATGAACATTAGTCCAGAA TACTTAAAGAAATTTATCGAACGATGAACATTAGTCCAGAA Direct Loss 1 0.58262721999103 1 0.797771573066711 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121693244 chr10:121693246 synonymous SNV . 0 hm6A_associated_SNPs_12600 0 0 1 3 121693243 121693263 mRNA hsa-miR-378 SEC23IP miRanda miRanda
14034 chr10 121693246 121693246 1 + A G rs34826964 121693244 + 121693224 121693264 41 TACTTAAAGAAATTTATCGAACAATGAACATTAGTCCAGAA TACTTAAAGAAATTTATCGAACGATGAACATTAGTCCAGAA Direct Loss 1 0.58262721999103 1 0.797771573066711 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121693244 chr10:121693246 synonymous SNV . 0 hm6A_associated_SNPs_12600 0 0 1 3 121693242 121693263 mRNA hsa-miR-422a SEC23IP miRanda miRanda
14034 chr10 121700458 121700458 1 + A G rs114064247 121700463 + 121700443 121700483 41 TATTGTTAGTGGGCTATTAAACTTGGATTTTTCTTTTTATT TATTGTTAGTGGGCTGTTAAACTTGGATTTTTCTTTTTATT < 41bp 1 0.432599892134318 1 0.117110908031464 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 SEC23IP ENSG00000107651 UTR3 Human protein_coding chr10:121700463 chr10:121700458 . . 0 hm6A_associated_SNPs_12601 0 0 1 2 121700458 121700479 mRNA hsa-miR-186 SEC23IP miRanda miRanda
14034 chr10 121700458 121700458 1 + A G rs114064247 121700463 + 121700443 121700483 41 TATTGTTAGTGGGCTATTAAACTTGGATTTTTCTTTTTATT TATTGTTAGTGGGCTGTTAAACTTGGATTTTTCTTTTTATT < 41bp 1 0.432599892134318 1 0.117110908031464 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 SEC23IP ENSG00000107651 UTR3 Human protein_coding chr10:121700463 chr10:121700458 . . 0 hm6A_associated_SNPs_12601 0 0 1 2 121700438 121700461 mRNA hsa-miR-365 SEC23IP miRanda miRanda
14034 chr10 122668659 122668659 1 + A C rs12259815 122668667 + 122668647 122668687 41 GTCTTTCAAGAGAGATACAAACAAGGCAGAAACATTTAAAC GTCTTTCAAGAGCGATACAAACAAGGCAGAAACATTTAAAC < 41bp 1 0.244231102920755 1 0.249666601419449 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 WDR11 ENSG00000120008 UTR3 Human protein_coding chr10:122668667 chr10:122668659 . . 0 hm6A_associated_SNPs_12607 0 0 1 2 122668656 122668678 mRNA hsa-miR-346 WDR11 miRanda miRanda
14034 chr10 122668659 122668659 1 + A C rs12259815 122668667 + 122668647 122668687 41 GTCTTTCAAGAGAGATACAAACAAGGCAGAAACATTTAAAC GTCTTTCAAGAGCGATACAAACAAGGCAGAAACATTTAAAC < 41bp 1 0.244231102920755 1 0.249666601419449 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 WDR11 ENSG00000120008 UTR3 Human protein_coding chr10:122668667 chr10:122668659 . . 0 hm6A_associated_SNPs_12607 0 0 1 2 122668657 122668678 mRNA hsa-miR-544 WDR11 miRanda miRanda
14034 chr10 126523982 126523982 1 + T C rs185970158 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTCCTATGATGAGCCA < 41bp 1 0.771405538045811 1 0.840850174427032 experiment 0.457188923908379 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523982 . . 0 hm6A_associated_SNPs_12635 0 0 1 4 126523974 126523995 mRNA hsa-miR-24 FAM175B miRanda miRanda
14034 chr10 126523982 126523982 1 + T C rs185970158 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTCCTATGATGAGCCA < 41bp 1 0.771405538045811 1 0.840850174427032 experiment 0.457188923908379 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523982 . . 0 hm6A_associated_SNPs_12635 0 0 1 4 126523975 126523997 mRNA hsa-miR-149 FAM175B miRanda miRanda
14034 chr10 126523982 126523982 1 + T C rs185970158 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTCCTATGATGAGCCA < 41bp 1 0.771405538045811 1 0.840850174427032 experiment 0.457188923908379 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523982 . . 0 hm6A_associated_SNPs_12635 0 0 1 4 126523969 126523989 mRNA hsa-miR-376a FAM175B miRanda miRanda
14034 chr10 126523982 126523982 1 + T C rs185970158 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTCCTATGATGAGCCA < 41bp 1 0.771405538045811 1 0.840850174427032 experiment 0.457188923908379 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523982 . . 0 hm6A_associated_SNPs_12635 0 0 1 4 126523968 126523989 mRNA hsa-miR-376b FAM175B miRanda miRanda
14034 chr10 126523987 126523987 1 + G A rs143981293 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATAATGAGCCA < 41bp 1 0.763079888279292 1 0.724696516990662 experiment 0.473840223441417 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523987 . . 0 hm6A_associated_SNPs_12636 0 0 0 4 126523974 126523995 mRNA hsa-miR-24 FAM175B miRanda miRanda
14034 chr10 126523987 126523987 1 + G A rs143981293 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATAATGAGCCA < 41bp 1 0.763079888279292 1 0.724696516990662 experiment 0.473840223441417 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523987 . . 0 hm6A_associated_SNPs_12636 0 0 0 4 126523975 126523997 mRNA hsa-miR-149 FAM175B miRanda miRanda
14034 chr10 126523987 126523987 1 + G A rs143981293 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATAATGAGCCA < 41bp 1 0.763079888279292 1 0.724696516990662 experiment 0.473840223441417 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523987 . . 0 hm6A_associated_SNPs_12636 0 0 0 4 126523969 126523989 mRNA hsa-miR-376a FAM175B miRanda miRanda
14034 chr10 126523987 126523987 1 + G A rs143981293 126523975 + 126523955 126523995 41 TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATGATGAGCCA TTAGCAGCAGCCTTCAAAGAACTTCTTTCTATAATGAGCCA < 41bp 1 0.763079888279292 1 0.724696516990662 experiment 0.473840223441417 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126523975 chr10:126523987 . . 0 hm6A_associated_SNPs_12636 0 0 0 4 126523968 126523989 mRNA hsa-miR-376b FAM175B miRanda miRanda
14034 chr10 126524899 126524899 1 + C T rs139492992 126524918 + 126524898 126524938 41 ACGGAAAATGAAATGCTAGAACTGCCGTTCTTTGGATCGCC ATGGAAAATGAAATGCTAGAACTGCCGTTCTTTGGATCGCC < 41bp 1 0.133227229485785 1 0.665059685707092 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 2 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126524918 chr10:126524899 . . 0 hm6A_associated_SNPs_12637 0 0 0 1 126524897 126524919 mRNA hsa-miR-544 FAM175B miRanda miRanda
14034 chr10 126525202 126525202 1 + G T rs559775619 126525194 + 126525174 126525214 41 AAATCTACAATGTATATCTGACAAAGCAGTTAAATGTGACA AAATCTACAATGTATATCTGACAAAGCATTTAAATGTGACA < 41bp 1 0.194616850165397 1 0.966852307319641 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126525194 chr10:126525202 . . 0 hm6A_associated_SNPs_12638 0 0 1 5 126525194 126525213 mRNA hsa-miR-23a FAM175B miRanda miRanda
14034 chr10 126525202 126525202 1 + G T rs559775619 126525194 + 126525174 126525214 41 AAATCTACAATGTATATCTGACAAAGCAGTTAAATGTGACA AAATCTACAATGTATATCTGACAAAGCATTTAAATGTGACA < 41bp 1 0.194616850165397 1 0.966852307319641 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126525194 chr10:126525202 . . 0 hm6A_associated_SNPs_12638 0 0 1 5 126525193 126525217 mRNA hsa-miR-32 FAM175B miRanda miRanda
14034 chr10 126525202 126525202 1 + G T rs559775619 126525194 + 126525174 126525214 41 AAATCTACAATGTATATCTGACAAAGCAGTTAAATGTGACA AAATCTACAATGTATATCTGACAAAGCATTTAAATGTGACA < 41bp 1 0.194616850165397 1 0.966852307319641 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126525194 chr10:126525202 . . 0 hm6A_associated_SNPs_12638 0 0 1 5 126525199 126525218 mRNA hsa-miR-219-5p FAM175B miRanda miRanda
14034 chr10 126525202 126525202 1 + G T rs559775619 126525194 + 126525174 126525214 41 AAATCTACAATGTATATCTGACAAAGCAGTTAAATGTGACA AAATCTACAATGTATATCTGACAAAGCATTTAAATGTGACA < 41bp 1 0.194616850165397 1 0.966852307319641 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126525194 chr10:126525202 . . 0 hm6A_associated_SNPs_12638 0 0 1 5 126525193 126525213 mRNA hsa-miR-23b FAM175B miRanda miRanda
14034 chr10 126525202 126525202 1 + G T rs559775619 126525194 + 126525174 126525214 41 AAATCTACAATGTATATCTGACAAAGCAGTTAAATGTGACA AAATCTACAATGTATATCTGACAAAGCATTTAAATGTGACA < 41bp 1 0.194616850165397 1 0.966852307319641 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 ABRAXAS2 ENSG00000165660 UTR3 Human protein_coding chr10:126525194 chr10:126525202 . . 0 hm6A_associated_SNPs_12638 0 0 1 5 126525194 126525217 mRNA hsa-miR-367 FAM175B miRanda miRanda
14034 chr10 127452054 127452054 1 + G A rs2296831 127452041 + 127452021 127452061 41 AGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCA AGCAGCAATGCCGTTCAGTGACTGCACAGAGCCATGTCCCA < 41bp 1 0.514592893316645 1 0.99204283952713 experiment 0.97081421336671 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 EDRF1 ENSG00000107938 UTR3 Human protein_coding chr10:127452041 chr10:127452054 . . 0 hm6A_associated_SNPs_12641 0 0 1 1 127452048 127452068 mRNA hsa-miR-187 C10orf137 miRanda miRanda
14034 chr10 127452294 127452294 1 + G A rs115614060 127452305 + 127452285 127452325 41 TAGTACCTCGGTATTAACAGACCTGCTGTGATGCAGTTACA TAGTACCTCAGTATTAACAGACCTGCTGTGATGCAGTTACA < 41bp 1 0.104060987720696 1 0.934829413890839 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 EDRF1 ENSG00000107938 UTR3 Human protein_coding chr10:127452305 chr10:127452294 . . 0 hm6A_associated_SNPs_12642 0 0 1 1 127452292 127452313 mRNA hsa-miR-214 C10orf137 miRanda miRanda
14034 chr10 129250637 129250637 1 + A G rs188254713 129250651 + 129250631 129250671 41 TGGACAATGATTTTTAAAAAACTAACTTTGTATAACCTAAT TGGACAGTGATTTTTAAAAAACTAACTTTGTATAACCTAAT < 41bp 1 0.147719314327794 1 0.491646319627762 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250651 chr10:129250637 . . 0 hm6A_associated_SNPs_12658 0 0 0 1 129250621 129250640 mRNA hsa-miR-219-5p DOCK1 miRanda miRanda
14034 chr10 129250637 129250637 1 + A G rs188254713 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAGTGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT < 41bp 1 0.114334956105303 1 0.554533839225769 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 3 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250637 . . 0 hm6A_associated_SNPs_12659 0 0 0 1 129250621 129250640 mRNA hsa-miR-219-5p DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250651 + 129250631 129250671 41 TGGACAATGATTTTTAAAAAACTAACTTTGTATAACCTAAT TGGACAATGATTTTTAAAAAACTAACTTTGTGTAACCTAAT < 41bp 1 0.158663733122967 1 0.563320636749268 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250651 chr10:129250662 . . 0 hm6A_associated_SNPs_12660 0 0 1 6 129250648 129250669 mRNA hsa-miR-21 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250651 + 129250631 129250671 41 TGGACAATGATTTTTAAAAAACTAACTTTGTATAACCTAAT TGGACAATGATTTTTAAAAAACTAACTTTGTGTAACCTAAT < 41bp 1 0.158663733122967 1 0.563320636749268 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250651 chr10:129250662 . . 0 hm6A_associated_SNPs_12660 0 0 1 6 129250647 129250669 mRNA hsa-miR-154 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250651 + 129250631 129250671 41 TGGACAATGATTTTTAAAAAACTAACTTTGTATAACCTAAT TGGACAATGATTTTTAAAAAACTAACTTTGTGTAACCTAAT < 41bp 1 0.158663733122967 1 0.563320636749268 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250651 chr10:129250662 . . 0 hm6A_associated_SNPs_12660 0 0 1 6 129250644 129250664 mRNA hsa-miR-381 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250651 + 129250631 129250671 41 TGGACAATGATTTTTAAAAAACTAACTTTGTATAACCTAAT TGGACAATGATTTTTAAAAAACTAACTTTGTGTAACCTAAT < 41bp 1 0.158663733122967 1 0.563320636749268 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250651 chr10:129250662 . . 0 hm6A_associated_SNPs_12660 0 0 1 6 129250659 129250680 mRNA hsa-miR-381 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250651 + 129250631 129250671 41 TGGACAATGATTTTTAAAAAACTAACTTTGTATAACCTAAT TGGACAATGATTTTTAAAAAACTAACTTTGTGTAACCTAAT < 41bp 1 0.158663733122967 1 0.563320636749268 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250651 chr10:129250662 . . 0 hm6A_associated_SNPs_12660 0 0 1 6 129250643 129250664 mRNA hsa-miR-300 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250651 + 129250631 129250671 41 TGGACAATGATTTTTAAAAAACTAACTTTGTATAACCTAAT TGGACAATGATTTTTAAAAAACTAACTTTGTGTAACCTAAT < 41bp 1 0.158663733122967 1 0.563320636749268 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250651 chr10:129250662 . . 0 hm6A_associated_SNPs_12660 0 0 1 6 129250659 129250680 mRNA hsa-miR-300 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTGTAACCTAATATTT < 41bp 1 0.119388744186541 1 0.612340569496155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250662 . . 0 hm6A_associated_SNPs_12661 0 0 1 6 129250648 129250669 mRNA hsa-miR-21 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTGTAACCTAATATTT < 41bp 1 0.119388744186541 1 0.612340569496155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250662 . . 0 hm6A_associated_SNPs_12661 0 0 1 6 129250647 129250669 mRNA hsa-miR-154 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTGTAACCTAATATTT < 41bp 1 0.119388744186541 1 0.612340569496155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250662 . . 0 hm6A_associated_SNPs_12661 0 0 1 6 129250644 129250664 mRNA hsa-miR-381 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTGTAACCTAATATTT < 41bp 1 0.119388744186541 1 0.612340569496155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250662 . . 0 hm6A_associated_SNPs_12661 0 0 1 6 129250659 129250680 mRNA hsa-miR-381 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTGTAACCTAATATTT < 41bp 1 0.119388744186541 1 0.612340569496155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250662 . . 0 hm6A_associated_SNPs_12661 0 0 1 6 129250643 129250664 mRNA hsa-miR-300 DOCK1 miRanda miRanda
14034 chr10 129250662 129250662 1 + A G rs75146403 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTGTAACCTAATATTT < 41bp 1 0.119388744186541 1 0.612340569496155 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250662 . . 0 hm6A_associated_SNPs_12661 0 0 1 6 129250659 129250680 mRNA hsa-miR-300 DOCK1 miRanda miRanda
14034 chr10 129250673 129250673 1 + T C rs79598436 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATACTT < 41bp 1 0.0995056610854547 1 0.6603884100914 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250673 . . 0 hm6A_associated_SNPs_12662 0 0 1 5 129250671 129250691 mRNA hsa-miR-143 DOCK1 miRanda miRanda
14034 chr10 129250673 129250673 1 + T C rs79598436 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATACTT < 41bp 1 0.0995056610854547 1 0.6603884100914 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250673 . . 0 hm6A_associated_SNPs_12662 0 0 1 5 129250666 129250687 mRNA hsa-miR-185 DOCK1 miRanda miRanda
14034 chr10 129250673 129250673 1 + T C rs79598436 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATACTT < 41bp 1 0.0995056610854547 1 0.6603884100914 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250673 . . 0 hm6A_associated_SNPs_12662 0 0 1 5 129250664 129250685 mRNA hsa-miR-186 DOCK1 miRanda miRanda
14034 chr10 129250673 129250673 1 + T C rs79598436 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATACTT < 41bp 1 0.0995056610854547 1 0.6603884100914 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250673 . . 0 hm6A_associated_SNPs_12662 0 0 1 5 129250659 129250680 mRNA hsa-miR-381 DOCK1 miRanda miRanda
14034 chr10 129250673 129250673 1 + T C rs79598436 129250655 + 129250635 129250675 41 CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATATTT CAATGATTTTTAAAAAACTAACTTTGTATAACCTAATACTT < 41bp 1 0.0995056610854547 1 0.6603884100914 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 DOCK1 ENSG00000150760 UTR3 Human protein_coding chr10:129250655 chr10:129250673 . . 0 hm6A_associated_SNPs_12662 0 0 1 5 129250659 129250680 mRNA hsa-miR-300 DOCK1 miRanda miRanda
14034 chr10 135054904 135054904 1 + T C rs2980729 135054885 + 135054865 135054905 41 AGCCTCGGGACAAAACAATGACTCAAGGACAGCACTTCTTG AGCCTCGGGACAAAACAATGACTCAAGGACAGCACTTCTCG < 41bp 1 0.544548807079065 1 0.967604756355286 experiment 0.91090238584187 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 40 VENTX ENSG00000151650 UTR3 Human protein_coding chr10:135054885 chr10:135054904 . . 0 hm6A_associated_SNPs_12681 0 0 0 1 135054890 135054911 mRNA hsa-miR-544 VENTX miRanda miRanda
14034 chr11 252733 252733 1 + T C rs1045405 252746 + 252726 252766 41 AGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGA AGACTGTCCTTGCTCTAAAAACAGGACTGTCCCTGATGGGA < 41bp 1 0.741774605545414 1 0.979125916957855 experiment 0.516450788909171 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 PSMD13 ENSG00000185627 UTR3 Human protein_coding chr11:252746 chr11:252733 . . 0 hm6A_associated_SNPs_12685 0 0 1 2 252713 252734 mRNA hsa-miR-212 PSMD13 miRanda miRanda
14034 chr11 252733 252733 1 + T C rs1045405 252746 + 252726 252766 41 AGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGA AGACTGTCCTTGCTCTAAAAACAGGACTGTCCCTGATGGGA < 41bp 1 0.741774605545414 1 0.979125916957855 experiment 0.516450788909171 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 PSMD13 ENSG00000185627 UTR3 Human protein_coding chr11:252746 chr11:252733 . . 0 hm6A_associated_SNPs_12685 0 0 1 2 252708 252734 mRNA hsa-miR-132 PSMD13 miRanda miRanda
14034 chr11 295152 295152 1 + G A rs115502773 295156 + 295136 295176 41 AGGCTCAGGCCTCAGCGTGGACAGCAGGGATAAGGGGCACG AGGCTCAGGCCTCAGCATGGACAGCAGGGATAAGGGGCACG < 41bp 1 0.664871207887905 1 0.967599928379059 experiment 0.67025758422419 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295156 chr11:295152 . . 0 hm6A_associated_SNPs_12692 0 0 0 1 295139 295164 mRNA hsa-miR-370 ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295289 295311 mRNA hsa-miR-17 ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295289 295311 mRNA hsa-miR-20a ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295286 295309 mRNA hsa-miR-22 ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295289 295311 mRNA hsa-miR-106a ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295285 295311 mRNA hsa-miR-320a ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295290 295311 mRNA hsa-miR-106b ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295289 295311 mRNA hsa-miR-20b ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295285 295311 mRNA hsa-miR-320b ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295287 295311 mRNA hsa-miR-320c ATHL1 miRanda miRanda
14034 chr11 295302 295302 1 + G C rs78386978 295296 + 295276 295316 41 TCAATCCCAGGCTCCTCTTGACTCTGGGCAGCTTTAATCAG TCAATCCCAGGCTCCTCTTGACTCTGCGCAGCTTTAATCAG < 41bp 1 0.571496294364471 1 0.866617798805237 experiment 0.857007411271058 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295296 chr11:295302 . . 0 hm6A_associated_SNPs_12695 0 0 1 10 295288 295311 mRNA hsa-miR-320d ATHL1 miRanda miRanda
14034 chr11 611982 611982 1 + A G rs189094654 611990 + 611970 612010 41 TGCTCACAGTTGAAAACTGGACACTTTTGTATGTATATTAT TGCTCACAGTTGGAAACTGGACACTTTTGTATGTATATTAT < 41bp 1 0.797248221438481 1 0.852096676826477 experiment 0.405503557123038 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 PHRF1 ENSG00000070047 UTR3 Human protein_coding chr11:611990 chr11:611982 . . 0 hm6A_associated_SNPs_12724 0 0 1 1 611969 611991 mRNA hsa-miR-145 PHRF1 miRanda miRanda
14034 chr11 703510 703510 1 + A G rs7104035 703511 + 703491 703531 41 GGAGGACAGAGCCCTTCAGAACAGAGGCCTCATCTCACTGC GGAGGACAGAGCCCTTCAGGACAGAGGCCTCATCTCACTGC < 41bp 1 0.362719276208695 1 0.780849933624268 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 TMEM80 ENSG00000177042 UTR3 Human protein_coding chr11:703511 chr11:703510 . . 0 hm6A_associated_SNPs_12726 0 0 1 1 703506 703527 mRNA hsa-miR-143 TMEM80 miRanda miRanda
14034 chr11 764414 764414 1 + A C rs11302 764431 + 764411 764451 41 TGAAGCTGGAGCGGATGCTGACAGTGAGTGTTGTGTGTGGG TGACGCTGGAGCGGATGCTGACAGTGAGTGTTGTGTGTGGG < 41bp 1 0.487162115552734 1 0.952271401882172 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 4 TALDO1 ENSG00000177156 CDS Human protein_coding chr11:764431 chr11:764414 nonsynonymous SNV 0.908 2 hm6A_associated_SNPs_12734 0 0 1 1 764414 764429 mRNA hsa-miR-324-5p TALDO1 miRanda miRanda
14034 chr11 764957 764957 1 + T C rs537502977 764949 + 764929 764969 41 TTTTACAAATTGGAGCAGGGACAGATCATAGATTTCTGATT TTTTACAAATTGGAGCAGGGACAGATCACAGATTTCTGATT < 41bp 1 0.532012396463157 1 0.305609703063965 experiment 0.935975207073686 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 29 TALDO1 ENSG00000177156 UTR3 Human protein_coding chr11:764949 chr11:764957 . . 0 hm6A_associated_SNPs_12735 0 0 1 3 764948 764970 mRNA hsa-miR-361-5p TALDO1 miRanda miRanda
14034 chr11 764957 764957 1 + T C rs537502977 764949 + 764929 764969 41 TTTTACAAATTGGAGCAGGGACAGATCATAGATTTCTGATT TTTTACAAATTGGAGCAGGGACAGATCACAGATTTCTGATT < 41bp 1 0.532012396463157 1 0.305609703063965 experiment 0.935975207073686 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 29 TALDO1 ENSG00000177156 UTR3 Human protein_coding chr11:764949 chr11:764957 . . 0 hm6A_associated_SNPs_12735 0 0 1 3 764945 764970 mRNA hsa-miR-383 TALDO1 miRanda miRanda
14034 chr11 764957 764957 1 + T C rs537502977 764949 + 764929 764969 41 TTTTACAAATTGGAGCAGGGACAGATCATAGATTTCTGATT TTTTACAAATTGGAGCAGGGACAGATCACAGATTTCTGATT < 41bp 1 0.532012396463157 1 0.305609703063965 experiment 0.935975207073686 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 29 TALDO1 ENSG00000177156 UTR3 Human protein_coding chr11:764949 chr11:764957 . . 0 hm6A_associated_SNPs_12735 0 0 1 3 764945 764967 mRNA hsa-miR-539 TALDO1 miRanda miRanda
14034 chr11 825110 825110 1 + A G rs1138714 825113 + 825093 825133 41 CCGCCCCTTTACTCCTGAGAACTTTGCAGCTGCCCTTCCCT CCGCCCCTTTACTCCTGGGAACTTTGCAGCTGCCCTTCCCT < 41bp 1 0.546381314652627 1 0.944175660610199 experiment 0.907237370694747 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 PNPLA2 ENSG00000255108 ncRNA_intronic Human antisense chr11:825113 chr11:825110 . . 0 hm6A_associated_SNPs_12744 1 0 1 3 825102 825124 mRNA hsa-miR-130a PNPLA2 miRanda miRanda
14034 chr11 825110 825110 1 + A G rs1138714 825113 + 825093 825133 41 CCGCCCCTTTACTCCTGAGAACTTTGCAGCTGCCCTTCCCT CCGCCCCTTTACTCCTGGGAACTTTGCAGCTGCCCTTCCCT < 41bp 1 0.546381314652627 1 0.944175660610199 experiment 0.907237370694747 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 PNPLA2 ENSG00000255108 ncRNA_intronic Human antisense chr11:825113 chr11:825110 . . 0 hm6A_associated_SNPs_12744 1 0 1 3 825105 825127 mRNA hsa-miR-449a PNPLA2 miRanda miRanda
14034 chr11 825110 825110 1 + A G rs1138714 825113 + 825093 825133 41 CCGCCCCTTTACTCCTGAGAACTTTGCAGCTGCCCTTCCCT CCGCCCCTTTACTCCTGGGAACTTTGCAGCTGCCCTTCCCT < 41bp 1 0.546381314652627 1 0.944175660610199 experiment 0.907237370694747 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 PNPLA2 ENSG00000255108 ncRNA_intronic Human antisense chr11:825113 chr11:825110 . . 0 hm6A_associated_SNPs_12744 1 0 1 3 825105 825127 mRNA hsa-miR-449b PNPLA2 miRanda miRanda
14034 chr11 2418562 2418562 1 + G A rs1049659 2418555 + 2418535 2418575 41 TCATGCACCTGTCCTTTCTAACACGTCGCCTTCAACTGTAA TCATGCACCTGTCCTTTCTAACACGTCACCTTCAACTGTAA < 41bp 1 0.774946473154203 1 0.799686431884766 experiment 0.450107053691594 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 CD81 ENSG00000110651 UTR3 Human protein_coding chr11:2418555 chr11:2418562 . . 0 hm6A_associated_SNPs_12764 0 0 1 1 2418546 2418567 mRNA hsa-miR-124 CD81 miRanda miRanda
14034 chr11 4113200 4113200 1 + A G rs3750996 4113212 + 4113192 4113232 41 TCATTATTATTTATTAACTGACCACCATGGCCTGCCTGCCC TCATTATTGTTTATTAACTGACCACCATGGCCTGCCTGCCC < 41bp 1 0.360341711152684 1 0.0587000250816345 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 STIM1 ENSG00000167323 UTR3 Human protein_coding chr11:4113212 chr11:4113200 . . 0 hm6A_associated_SNPs_12769 0 0 1 1 4113194 4113214 mRNA hsa-miR-223 STIM1 miRanda miRanda
14034 chr11 4114375 4114375 1 + G A rs183453237 4114361 + 4114341 4114381 41 GACTGCCTTGTACTCCCTGGACACCCTCAAATGGGGTTTTC GACTGCCTTGTACTCCCTGGACACCCTCAAATGGAGTTTTC < 41bp 1 0.517478943025019 1 0.0835651159286499 experiment 0.965042113949961 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 STIM1 ENSG00000167323 UTR3 Human protein_coding chr11:4114361 chr11:4114375 . . 0 hm6A_associated_SNPs_12770 0 0 1 1 4114373 4114394 mRNA hsa-miR-203 STIM1 miRanda miRanda
14034 chr11 5632121 5632121 1 + A G rs150778640 5632127 + 5632107 5632147 41 CTGTCTGGAAAAGCATTATGACTGTAGTGTCCTGGGCTCCC CTGTCTGGAAAAGCGTTATGACTGTAGTGTCCTGGGCTCCC < 41bp 1 0.521772924425142 1 0.0845559537410736 experiment 0.956454151149716 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 15 TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632127 chr11:5632121 nonsynonymous SNV 0.966 0 hm6A_associated_SNPs_12774 0 0 0 2 5632111 5632134 mRNA hsa-miR-139-5p TRIM6 miRanda miRanda
14034 chr11 5632121 5632121 1 + A G rs150778640 5632127 + 5632107 5632147 41 CTGTCTGGAAAAGCATTATGACTGTAGTGTCCTGGGCTCCC CTGTCTGGAAAAGCGTTATGACTGTAGTGTCCTGGGCTCCC < 41bp 1 0.521772924425142 1 0.0845559537410736 experiment 0.956454151149716 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 15 TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632127 chr11:5632121 nonsynonymous SNV 0.966 0 hm6A_associated_SNPs_12774 0 0 0 2 5632103 5632125 mRNA hsa-miR-155 TRIM6 miRanda miRanda
14034 chr11 6592230 6592230 1 + G A rs200845640 6592215 + 6592195 6592235 41 TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTAGGCAC < 41bp 1 0.555357767122391 1 0.989763498306274 experiment 0.889284465755218 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592215 chr11:6592230 synonymous SNV . 0 hm6A_associated_SNPs_12779 0 0 0 1 6592221 6592242 mRNA hsa-miR-210 DNHD1 miRanda miRanda
14034 chr11 7674769 7674769 1 + G A rs115145117 7674772 + 7674752 7674792 41 ACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGG ACTTCGATGCAGGTCCAAAGACCATGGACACTCCCACGAGG < 41bp 1 0.747592458538321 1 0.991910934448242 experiment 0.504815082923359 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 18 PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7674772 chr11:7674769 unknown . 0 hm6A_associated_SNPs_12786 0 0 1 1 7674767 7674786 mRNA hsa-miR-122 PPFIBP2 miRanda miRanda
14034 chr11 7674920 7674920 1 + A G rs184909572 7674912 + 7674892 7674932 41 CAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCC CAGGGACTTCTGCCACAGTGACAATGGAGTTGTGTTGTGCC < 41bp 1 0.421039224987327 1 0.942643523216248 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 29 PPFIBP2 ENSG00000166387 UTR3 Human protein_coding chr11:7674912 chr11:7674920 . . 0 hm6A_associated_SNPs_12788 0 0 0 2 7674916 7674935 mRNA hsa-miR-124 PPFIBP2 miRanda miRanda
14034 chr11 7674920 7674920 1 + A G rs184909572 7674912 + 7674892 7674932 41 CAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCC CAGGGACTTCTGCCACAGTGACAATGGAGTTGTGTTGTGCC < 41bp 1 0.421039224987327 1 0.942643523216248 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 29 PPFIBP2 ENSG00000166387 UTR3 Human protein_coding chr11:7674912 chr11:7674920 . . 0 hm6A_associated_SNPs_12788 0 0 0 2 7674915 7674935 mRNA hsa-miR-506 PPFIBP2 miRanda miRanda
14034 chr11 8126295 8126295 1 + T C rs185013043 8126292 + 8126272 8126312 41 ATGCTTTTGGTTGAAATTGAACATACTCTAGTGAATGTGCC ATGCTTTTGGTTGAAATTGAACACACTCTAGTGAATGTGCC < 41bp 1 0.297706865672181 1 0.663088619709015 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 TUB ENSG00000166402 UTR3 Human protein_coding chr11:8126292 chr11:8126295 . . 0 hm6A_associated_SNPs_12794 0 0 1 3 8126278 8126300 mRNA hsa-miR-190 TUB miRanda miRanda
14034 chr11 8126295 8126295 1 + T C rs185013043 8126292 + 8126272 8126312 41 ATGCTTTTGGTTGAAATTGAACATACTCTAGTGAATGTGCC ATGCTTTTGGTTGAAATTGAACACACTCTAGTGAATGTGCC < 41bp 1 0.297706865672181 1 0.663088619709015 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 TUB ENSG00000166402 UTR3 Human protein_coding chr11:8126292 chr11:8126295 . . 0 hm6A_associated_SNPs_12794 0 0 1 3 8126293 8126315 mRNA hsa-miR-506 TUB miRanda miRanda
14034 chr11 8126295 8126295 1 + T C rs185013043 8126292 + 8126272 8126312 41 ATGCTTTTGGTTGAAATTGAACATACTCTAGTGAATGTGCC ATGCTTTTGGTTGAAATTGAACACACTCTAGTGAATGTGCC < 41bp 1 0.297706865672181 1 0.663088619709015 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 TUB ENSG00000166402 UTR3 Human protein_coding chr11:8126292 chr11:8126295 . . 0 hm6A_associated_SNPs_12794 0 0 1 3 8126279 8126300 mRNA hsa-miR-190b TUB miRanda miRanda
14034 chr11 8708329 8708329 1 + A G rs533128651 8708325 + 8708305 8708345 41 CTATTGGAAAACTGATGGTGACCAATTCATGTTTACAAATA CTATTGGAAAACTGATGGTGACCAGTTCATGTTTACAAATA < 41bp 1 0.0251852557539786 1 0.0084708034992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8708325 chr11:8708329 . . 0 hm6A_associated_SNPs_12803 0 0 1 5 8708320 8708341 mRNA hsa-miR-30a RPL27A miRanda miRanda
14034 chr11 8708329 8708329 1 + A G rs533128651 8708325 + 8708305 8708345 41 CTATTGGAAAACTGATGGTGACCAATTCATGTTTACAAATA CTATTGGAAAACTGATGGTGACCAGTTCATGTTTACAAATA < 41bp 1 0.0251852557539786 1 0.0084708034992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8708325 chr11:8708329 . . 0 hm6A_associated_SNPs_12803 0 0 1 5 8708319 8708341 mRNA hsa-miR-30c RPL27A miRanda miRanda
14034 chr11 8708329 8708329 1 + A G rs533128651 8708325 + 8708305 8708345 41 CTATTGGAAAACTGATGGTGACCAATTCATGTTTACAAATA CTATTGGAAAACTGATGGTGACCAGTTCATGTTTACAAATA < 41bp 1 0.0251852557539786 1 0.0084708034992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8708325 chr11:8708329 . . 0 hm6A_associated_SNPs_12803 0 0 1 5 8708320 8708341 mRNA hsa-miR-30d RPL27A miRanda miRanda
14034 chr11 8708329 8708329 1 + A G rs533128651 8708325 + 8708305 8708345 41 CTATTGGAAAACTGATGGTGACCAATTCATGTTTACAAATA CTATTGGAAAACTGATGGTGACCAGTTCATGTTTACAAATA < 41bp 1 0.0251852557539786 1 0.0084708034992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8708325 chr11:8708329 . . 0 hm6A_associated_SNPs_12803 0 0 1 5 8708320 8708341 mRNA hsa-miR-30b RPL27A miRanda miRanda
14034 chr11 8708329 8708329 1 + A G rs533128651 8708325 + 8708305 8708345 41 CTATTGGAAAACTGATGGTGACCAATTCATGTTTACAAATA CTATTGGAAAACTGATGGTGACCAGTTCATGTTTACAAATA < 41bp 1 0.0251852557539786 1 0.0084708034992218 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8708325 chr11:8708329 . . 0 hm6A_associated_SNPs_12803 0 0 1 5 8708320 8708341 mRNA hsa-miR-30e RPL27A miRanda miRanda
14034 chr11 9468649 9468649 1 + C T rs568328270 9468642 + 9468622 9468662 41 TAATGAATAGTATTAAAGAAACATTCTCGTCTTCCTTTACC TAATGAATAGTATTAAAGAAACATTCTTGTCTTCCTTTACC < 41bp 1 0.575600794198976 1 0.246981889009476 experiment 0.848798411602048 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 IPO7 ENSG00000205339 UTR3 Human protein_coding chr11:9468642 chr11:9468649 . . 0 hm6A_associated_SNPs_12808 0 0 1 1 9468635 9468657 mRNA hsa-miR-7 IPO7 miRanda miRanda
14034 chr11 11978041 11978041 1 + A G rs148059628 11978021 + 11978001 11978041 41 GGGGACAGGGGAATGAGTAAACTTCTTTTATTGCGGACAAA GGGGACAGGGGAATGAGTAAACTTCTTTTATTGCGGACAAG < 41bp 1 0.730854576608538 1 0.952828407287598 experiment 0.538290846782924 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 USP47 ENSG00000170242 UTR3 Human protein_coding chr11:11978021 chr11:11978041 . . 0 hm6A_associated_SNPs_12829 0 0 1 3 11978026 11978051 mRNA hsa-miR-25 USP47 miRanda miRanda
14034 chr11 11978041 11978041 1 + A G rs148059628 11978021 + 11978001 11978041 41 GGGGACAGGGGAATGAGTAAACTTCTTTTATTGCGGACAAA GGGGACAGGGGAATGAGTAAACTTCTTTTATTGCGGACAAG < 41bp 1 0.730854576608538 1 0.952828407287598 experiment 0.538290846782924 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 USP47 ENSG00000170242 UTR3 Human protein_coding chr11:11978021 chr11:11978041 . . 0 hm6A_associated_SNPs_12829 0 0 1 3 11978027 11978051 mRNA hsa-miR-92a USP47 miRanda miRanda
14034 chr11 11978041 11978041 1 + A G rs148059628 11978021 + 11978001 11978041 41 GGGGACAGGGGAATGAGTAAACTTCTTTTATTGCGGACAAA GGGGACAGGGGAATGAGTAAACTTCTTTTATTGCGGACAAG < 41bp 1 0.730854576608538 1 0.952828407287598 experiment 0.538290846782924 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 USP47 ENSG00000170242 UTR3 Human protein_coding chr11:11978021 chr11:11978041 . . 0 hm6A_associated_SNPs_12829 0 0 1 3 11978029 11978051 mRNA hsa-miR-455-5p USP47 miRanda miRanda
14034 chr11 13408291 13408291 1 + A G rs145121921 13408275 + 13408255 13408295 41 TGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGC TGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCGTGGC < 41bp 1 0.78856657485402 1 0.985917985439301 experiment 0.42286685029196 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13408275 chr11:13408291 synonymous SNV . 0 hm6A_associated_SNPs_12838 0 0 0 1 13408288 13408311 mRNA hsa-miR-142-3p ARNTL miRanda miRanda
14034 chr11 13750393 13750393 1 + T C rs190856239 13750413 + 13750393 13750433 41 TCATCTCACTTTTTGTCAAGACATTAAACCATCTTAGATCG CCATCTCACTTTTTGTCAAGACATTAAACCATCTTAGATCG < 41bp 1 0.616920596181728 1 0.297041714191437 experiment 0.766158807636544 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 FAR1 ENSG00000197601 UTR3 Human protein_coding chr11:13750413 chr11:13750393 . . 0 hm6A_associated_SNPs_12841 0 0 1 1 13750380 13750400 mRNA hsa-miR-143 FAR1 miRanda miRanda
14034 chr11 17351748 17351748 1 + T C rs12292418 17351751 + 17351731 17351771 41 ATTGCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA ATTGCTTTACAAGAAAACGAACTTAAGAAGAAGGCAGATGA < 41bp 1 0.720606379667134 1 0.988611698150635 experiment 0.558787240665732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 18 NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17351751 chr11:17351748 synonymous SNV . 0 hm6A_associated_SNPs_12851 0 0 1 1 17351748 17351770 mRNA hsa-miR-346 NUCB2 miRanda miRanda
14034 chr11 18723732 18723732 1 + G C rs144959681 18723725 + 18723705 18723745 41 AAAAGGATCTCCCTAGCAGAACTCGTGGTTCAGGACAATGC AAAAGGATCTCCCTAGCAGAACTCGTGCTTCAGGACAATGC < 41bp 1 0.329614795302811 1 0.966746807098389 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 TMEM86A ENSG00000151117 UTR3 Human protein_coding chr11:18723725 chr11:18723732 . . 0 hm6A_associated_SNPs_12864 0 0 0 1 18723728 18723749 mRNA hsa-miR-23b TMEM86A miRanda miRanda
14034 chr11 31453719 31453719 1 + A C rs139678308 31453700 + 31453680 31453720 41 TACGAATAGTTACTACTCTGACTTGTAAATGTAGCTGCTAA TACGAATAGTTACTACTCTGACTTGTAAATGTAGCTGCTCA < 41bp 1 0.0216539071875402 1 0.011981725692749 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 DNAJC24 ENSG00000148950;ENSG00000170946 downstream Human other chr11:31453700 chr11:31453719 . . 0 hm6A_associated_SNPs_12876 0 0 1 2 31453696 31453719 mRNA hsa-miR-15b DNAJC24 miRanda miRanda
14034 chr11 31453719 31453719 1 + A C rs139678308 31453700 + 31453680 31453720 41 TACGAATAGTTACTACTCTGACTTGTAAATGTAGCTGCTAA TACGAATAGTTACTACTCTGACTTGTAAATGTAGCTGCTCA < 41bp 1 0.0216539071875402 1 0.011981725692749 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 DNAJC24 ENSG00000148950;ENSG00000170946 downstream Human other chr11:31453700 chr11:31453719 . . 0 hm6A_associated_SNPs_12876 0 0 1 2 31453711 31453733 mRNA hsa-miR-875-5p DNAJC24 miRanda miRanda
14034 chr11 32999448 32999448 1 + G A rs75129510 32999459 + 32999439 32999479 41 CTGCTCAATGCCCAAATAAGACACGCGGATATTGCTATTGT CTGCTCAATACCCAAATAAGACACGCGGATATTGCTATTGT < 41bp 1 0.360216920684236 1 0.0826877653598785 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 QSER1 ENSG00000060749 UTR3 Human protein_coding chr11:32999459 chr11:32999448 . . 0 hm6A_associated_SNPs_12892 0 0 1 1 32999444 32999464 mRNA hsa-miR-187 QSER1 miRanda miRanda
14034 chr11 32999462 32999462 1 + C G rs114918008 32999459 + 32999439 32999479 41 CTGCTCAATGCCCAAATAAGACACGCGGATATTGCTATTGT CTGCTCAATGCCCAAATAAGACAGGCGGATATTGCTATTGT < 41bp 1 0.326583949983714 1 0.0551057457923889 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 QSER1 ENSG00000060749 UTR3 Human protein_coding chr11:32999459 chr11:32999462 . . 0 hm6A_associated_SNPs_12893 0 0 1 1 32999444 32999464 mRNA hsa-miR-187 QSER1 miRanda miRanda
14034 chr11 32999464 32999464 1 + C A rs560067042 32999459 + 32999439 32999479 41 CTGCTCAATGCCCAAATAAGACACGCGGATATTGCTATTGT CTGCTCAATGCCCAAATAAGACACGAGGATATTGCTATTGT < 41bp 1 0.350030607133774 1 0.0537442564964294 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 26 QSER1 ENSG00000060749 UTR3 Human protein_coding chr11:32999459 chr11:32999464 . . 0 hm6A_associated_SNPs_12894 0 0 1 1 32999444 32999464 mRNA hsa-miR-187 QSER1 miRanda miRanda
14034 chr11 33000434 33000434 1 + G A rs78828707 33000442 + 33000422 33000462 41 ATACAGTCATGCGTTGCTTAACAGCAGGGATACATTCTGAG ATACAGTCATGCATTGCTTAACAGCAGGGATACATTCTGAG < 41bp 1 0.209953695059002 1 0.0463477373123169 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 QSER1 ENSG00000060749 UTR3 Human protein_coding chr11:33000442 chr11:33000434 . . 0 hm6A_associated_SNPs_12895 0 0 1 1 33000429 33000450 mRNA hsa-miR-370 QSER1 miRanda miRanda
14034 chr11 34120373 34120373 1 + T C rs149703424 34120388 + 34120368 34120408 41 TGTTATGTAGTTTCTTTTTAACAGTTTAGGTAATAAGGTCT TGTTACGTAGTTTCTTTTTAACAGTTTAGGTAATAAGGTCT < 41bp 1 0.16555952186775 1 0.0028967559337616 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34120388 chr11:34120373 . . 0 hm6A_associated_SNPs_12912 0 0 1 2 34120357 34120379 mRNA hsa-miR-221 CAPRIN1 miRanda miRanda
14034 chr11 34120373 34120373 1 + T C rs149703424 34120388 + 34120368 34120408 41 TGTTATGTAGTTTCTTTTTAACAGTTTAGGTAATAAGGTCT TGTTACGTAGTTTCTTTTTAACAGTTTAGGTAATAAGGTCT < 41bp 1 0.16555952186775 1 0.0028967559337616 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34120388 chr11:34120373 . . 0 hm6A_associated_SNPs_12912 0 0 1 2 34120359 34120379 mRNA hsa-miR-222 CAPRIN1 miRanda miRanda
14034 chr11 34121038 34121038 1 + T C rs191894780 34121057 + 34121037 34121077 41 TTTCATCCCATAAAGACAGGACTACAATTGTCAGCTTTCTA TCTCATCCCATAAAGACAGGACTACAATTGTCAGCTTTCTA < 41bp 1 0.75962430036427 1 0.950451195240021 experiment 0.48075139927146 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 2 CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34121057 chr11:34121038 . . 0 hm6A_associated_SNPs_12913 0 0 1 2 34121018 34121038 mRNA hsa-miR-212 CAPRIN1 miRanda miRanda
14034 chr11 34121038 34121038 1 + T C rs191894780 34121057 + 34121037 34121077 41 TTTCATCCCATAAAGACAGGACTACAATTGTCAGCTTTCTA TCTCATCCCATAAAGACAGGACTACAATTGTCAGCTTTCTA < 41bp 1 0.75962430036427 1 0.950451195240021 experiment 0.48075139927146 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 2 CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34121057 chr11:34121038 . . 0 hm6A_associated_SNPs_12913 0 0 1 2 34121017 34121038 mRNA hsa-miR-132 CAPRIN1 miRanda miRanda
14034 chr11 34121189 34121189 1 + A G rs145563168 34121186 + 34121166 34121206 41 CACCCTTGCTTAGGAGTAAAACAATATACTTTACAGGGTGA CACCCTTGCTTAGGAGTAAAACAGTATACTTTACAGGGTGA < 41bp 1 0.661736837897127 1 0.775229692459106 experiment 0.676526324205746 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34121186 chr11:34121189 . . 0 hm6A_associated_SNPs_12914 0 0 1 2 34121185 34121205 mRNA hsa-miR-10a CAPRIN1 miRanda miRanda
14034 chr11 34121189 34121189 1 + A G rs145563168 34121186 + 34121166 34121206 41 CACCCTTGCTTAGGAGTAAAACAATATACTTTACAGGGTGA CACCCTTGCTTAGGAGTAAAACAGTATACTTTACAGGGTGA < 41bp 1 0.661736837897127 1 0.775229692459106 experiment 0.676526324205746 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34121186 chr11:34121189 . . 0 hm6A_associated_SNPs_12914 0 0 1 2 34121184 34121205 mRNA hsa-miR-10b CAPRIN1 miRanda miRanda
14034 chr11 34121303 34121303 1 + A G rs574739461 34121317 + 34121297 34121337 41 TATTCAATGATAACTGACAAACTAAATTATTTCCCTAGAAA TATTCAGTGATAACTGACAAACTAAATTATTTCCCTAGAAA < 41bp 1 0.452598238530319 1 0.873602151870728 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34121317 chr11:34121303 . . 0 hm6A_associated_SNPs_12915 0 0 1 1 34121292 34121315 mRNA hsa-miR-223 CAPRIN1 miRanda miRanda
14034 chr11 34474682 34474682 1 + C A rs148174786 34474676 + 34474656 34474696 41 GCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGAC GCCAAAAGAGAAATCCTCAGACACATATGAAGGATCCGGAC < 41bp 1 0.643486103654782 1 0.0495004951953888 experiment 0.713027792690436 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 CAT ENSG00000121691 CDS Human protein_coding chr11:34474676 chr11:34474682 nonsynonymous SNV 0.983 2 hm6A_associated_SNPs_12921 0 0 1 1 34474673 34474694 mRNA hsa-miR-127-3p CAT miRanda miRanda
14034 chr11 34680491 34680491 1 + T C rs577347708 34680474 + 34680454 34680494 41 AGGATGGAGAGAAAATGAAAACTGAAGCTGCCAATACTTTG AGGATGGAGAGAAAATGAAAACTGAAGCTGCCAATACCTTG < 41bp 1 0.377743212033689 1 0.996960759162903 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 EHF ENSG00000135373 UTR3 Human protein_coding chr11:34680474 chr11:34680491 . . 0 hm6A_associated_SNPs_12922 0 0 0 1 34680482 34680502 mRNA hsa-miR-599 EHF miRanda miRanda
14034 chr11 35250881 35250881 1 + C G rs139168368 35250880 + 35250860 35250900 41 GACATGAAGATTGGGGTGTAACACCTACACCATTATCTTGG GACATGAAGATTGGGGTGTAAGACCTACACCATTATCTTGG Direct Loss 1 0.325093971344941 1 0.968964576721191 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 22 CD44 ENSG00000026508 UTR3 Human protein_coding chr11:35250880 chr11:35250881 . . 0 hm6A_associated_SNPs_12931 0 0 1 1 35250860 35250888 mRNA hsa-miR-142-3p CD44 miRanda miRanda
14034 chr11 35830254 35830254 1 + G A rs192232885 35830245 + 35830225 35830265 41 GTTTCAGATTTGCTTTATAGACTCCTGCTGTCTTCAGTACC GTTTCAGATTTGCTTTATAGACTCCTGCTATCTTCAGTACC < 41bp 1 0.194728292383423 1 0.418028265237808 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 TRIM44 ENSG00000166326 downstream Human protein_coding chr11:35830245 chr11:35830254 . . 0 hm6A_associated_SNPs_12935 0 0 1 1 35830233 35830255 mRNA hsa-miR-214 TRIM44 miRanda miRanda
14034 chr11 35830738 35830738 1 + A G rs16927957 35830732 + 35830712 35830752 41 GAAATAACTTGTATTAAGGAACAACTATGAGCCAGGCCCTG GAAATAACTTGTATTAAGGAACAACTGTGAGCCAGGCCCTG < 41bp 1 0.372517690260862 1 0.437147498130798 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 27 TRIM44 ENSG00000166326 downstream Human protein_coding chr11:35830732 chr11:35830738 . . 0 hm6A_associated_SNPs_12937 0 0 1 1 35830725 35830747 mRNA hsa-miR-149 TRIM44 miRanda miRanda
14034 chr11 36680608 36680608 1 + G C rs561002206 36680621 + 36680601 36680641 41 TGATGAAGAATTTGATTATGACAATGTGATGCTAACCTCCA TGATGAACAATTTGATTATGACAATGTGATGCTAACCTCCA < 41bp 1 0.715988329900258 1 0.198068410158157 experiment 0.568023340199485 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680621 chr11:36680608 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_12941 0 0 1 2 36680590 36680610 mRNA hsa-miR-205 C11orf74 miRanda miRanda
14034 chr11 36680608 36680608 1 + G C rs561002206 36680621 + 36680601 36680641 41 TGATGAAGAATTTGATTATGACAATGTGATGCTAACCTCCA TGATGAACAATTTGATTATGACAATGTGATGCTAACCTCCA < 41bp 1 0.715988329900258 1 0.198068410158157 experiment 0.568023340199485 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680621 chr11:36680608 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_12941 0 0 1 2 36680607 36680627 mRNA hsa-miR-219-5p C11orf74 miRanda miRanda
14034 chr11 36680719 36680719 1 + G A rs61753861 36680714 + 36680694 36680734 41 GAGAAAGGACACCAGCCCAGACTTAGAGAAATCCTGTGACT GAGAAAGGACACCAGCCCAGACTTAAAGAAATCCTGTGACT < 41bp 1 0.286255735348192 1 0.812594652175903 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680714 chr11:36680719 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_12942 0 0 1 1 36680707 36680728 mRNA hsa-miR-876-5p C11orf74 miRanda miRanda
14034 chr11 36680719 36680719 1 + G A rs61753861 36680732 + 36680712 36680752 41 AGACTTAGAGAAATCCTGTGACTGATTCACAGAGGCATTTT AGACTTAAAGAAATCCTGTGACTGATTCACAGAGGCATTTT < 41bp 1 0.269150633054047 1 0.656526863574982 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680732 chr11:36680719 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_12943 0 0 1 1 36680707 36680728 mRNA hsa-miR-876-5p C11orf74 miRanda miRanda
14034 chr11 43365112 43365112 1 + T G rs369508239 43365114 + 43365094 43365134 41 AGGGCTACCCAGAAAAAGTGACTTGATAACATGGTACCAAT AGGGCTACCCAGAAAAAGGGACTTGATAACATGGTACCAAT < 41bp 1 0.505353371475326 1 0.656718134880066 experiment 0.989293257049348 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 API5 ENSG00000254907 ncRNA_intronic Human antisense chr11:43365114 chr11:43365112 . . 0 hm6A_associated_SNPs_12945 0 0 0 1 43365098 43365118 mRNA hsa-miR-224 API5 miRanda miRanda
14034 chr11 43365112 43365112 1 + T G rs369508239 43365122 + 43365102 43365142 41 CCAGAAAAAGTGACTTGATAACATGGTACCAATAAGTAAGG CCAGAAAAAGGGACTTGATAACATGGTACCAATAAGTAAGG < 41bp 1 0.567300819501832 1 0.029808521270752 experiment 0.865398360996335 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 11 API5 ENSG00000254907 ncRNA_intronic Human antisense chr11:43365122 chr11:43365112 . . 0 hm6A_associated_SNPs_12946 0 0 0 1 43365098 43365118 mRNA hsa-miR-224 API5 miRanda miRanda
14034 chr11 43877063 43877063 1 + A G rs528539782 43877054 + 43877034 43877074 41 TAGAACTAATATTGTCGGGAACACCTAATAGAAAGGAATAC TAGAACTAATATTGTCGGGAACACCTAATGGAAAGGAATAC < 41bp 1 0.478041703584804 1 0.19276824593544 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 30 HSD17B12 ENSG00000246250 ncRNA_intronic Human antisense chr11:43877054 chr11:43877063 . . 0 hm6A_associated_SNPs_12949 0 0 1 2 43877059 43877082 mRNA hsa-miR-374a HSD17B12 miRanda miRanda
14034 chr11 43877063 43877063 1 + A G rs528539782 43877054 + 43877034 43877074 41 TAGAACTAATATTGTCGGGAACACCTAATAGAAAGGAATAC TAGAACTAATATTGTCGGGAACACCTAATGGAAAGGAATAC < 41bp 1 0.478041703584804 1 0.19276824593544 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 30 HSD17B12 ENSG00000246250 ncRNA_intronic Human antisense chr11:43877054 chr11:43877063 . . 0 hm6A_associated_SNPs_12949 0 0 1 2 43877058 43877082 mRNA hsa-miR-374b HSD17B12 miRanda miRanda
14034 chr11 43877610 43877610 1 + T C rs558641381 43877625 + 43877605 43877645 41 CAATATTGATCACACATATGACACAGGCTAGTCCTATAAAA CAATACTGATCACACATATGACACAGGCTAGTCCTATAAAA < 41bp 1 0.272636975226693 1 0.0366588532924652 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 HSD17B12 ENSG00000246250 ncRNA_intronic Human antisense chr11:43877625 chr11:43877610 . . 0 hm6A_associated_SNPs_12952 0 0 1 1 43877606 43877628 mRNA hsa-miR-448 HSD17B12 miRanda miRanda
14034 chr11 44640960 44640960 1 + T C rs193127050 44640963 + 44640943 44640983 41 CCCTGGCGCAGGTGGGCTGGACTTCTACCTGCCCTCAAGGG CCCTGGCGCAGGTGGGCCGGACTTCTACCTGCCCTCAAGGG < 41bp 1 0.584564334348583 1 0.353510141372681 experiment 0.830871331302834 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 CD82 ENSG00000085117 UTR3 Human protein_coding chr11:44640963 chr11:44640960 . . 0 hm6A_associated_SNPs_12962 0 0 0 1 44640952 44640974 mRNA hsa-miR-125a-3p CD82 miRanda miRanda
14034 chr11 44951360 44951360 1 + A G rs60543102 44951358 + 44951338 44951378 41 ATCTCAAAGGCCCAGAGAGGACAGTGACCATCCACAGACAC ATCTCAAAGGCCCAGAGAGGACGGTGACCATCCACAGACAC Direct Loss 1 0.347997320915519 1 0.965441107749939 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 TSPAN18 ENSG00000157570 UTR3 Human protein_coding chr11:44951358 chr11:44951360 . . 0 hm6A_associated_SNPs_12967 0 0 0 1 44951360 44951384 mRNA hsa-miR-138 TSPAN18 miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405320 + 46405300 46405340 41 CACAATTCCATTACTAAGAAACACATCAAATAAACTGACTT CACAATTCCATTACTAAGAAACACATAAAATAAACTGACTT < 41bp 1 0.35660783940515 1 0.349656522274017 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405320 chr11:46405326 . . 0 hm6A_associated_SNPs_12984 0 0 1 4 46405318 46405339 mRNA hsa-miR-223 MDK miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405320 + 46405300 46405340 41 CACAATTCCATTACTAAGAAACACATCAAATAAACTGACTT CACAATTCCATTACTAAGAAACACATAAAATAAACTGACTT < 41bp 1 0.35660783940515 1 0.349656522274017 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405320 chr11:46405326 . . 0 hm6A_associated_SNPs_12984 0 0 1 4 46405321 46405341 mRNA hsa-miR-224 MDK miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405320 + 46405300 46405340 41 CACAATTCCATTACTAAGAAACACATCAAATAAACTGACTT CACAATTCCATTACTAAGAAACACATAAAATAAACTGACTT < 41bp 1 0.35660783940515 1 0.349656522274017 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405320 chr11:46405326 . . 0 hm6A_associated_SNPs_12984 0 0 1 4 46405305 46405327 mRNA hsa-miR-190 MDK miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405320 + 46405300 46405340 41 CACAATTCCATTACTAAGAAACACATCAAATAAACTGACTT CACAATTCCATTACTAAGAAACACATAAAATAAACTGACTT < 41bp 1 0.35660783940515 1 0.349656522274017 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405320 chr11:46405326 . . 0 hm6A_associated_SNPs_12984 0 0 1 4 46405307 46405327 mRNA hsa-miR-190b MDK miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405337 + 46405317 46405357 41 GAAACACATCAAATAAACTGACTTTTTCCCCCCAATAAAAG GAAACACATAAAATAAACTGACTTTTTCCCCCCAATAAAAG < 41bp 1 0.469889498586367 1 0.576914489269257 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405337 chr11:46405326 . . 0 hm6A_associated_SNPs_12985 0 0 1 4 46405318 46405339 mRNA hsa-miR-223 MDK miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405337 + 46405317 46405357 41 GAAACACATCAAATAAACTGACTTTTTCCCCCCAATAAAAG GAAACACATAAAATAAACTGACTTTTTCCCCCCAATAAAAG < 41bp 1 0.469889498586367 1 0.576914489269257 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405337 chr11:46405326 . . 0 hm6A_associated_SNPs_12985 0 0 1 4 46405321 46405341 mRNA hsa-miR-224 MDK miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405337 + 46405317 46405357 41 GAAACACATCAAATAAACTGACTTTTTCCCCCCAATAAAAG GAAACACATAAAATAAACTGACTTTTTCCCCCCAATAAAAG < 41bp 1 0.469889498586367 1 0.576914489269257 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405337 chr11:46405326 . . 0 hm6A_associated_SNPs_12985 0 0 1 4 46405305 46405327 mRNA hsa-miR-190 MDK miRanda miRanda
14034 chr11 46405326 46405326 1 + C A rs116869512 46405337 + 46405317 46405357 41 GAAACACATCAAATAAACTGACTTTTTCCCCCCAATAAAAG GAAACACATAAAATAAACTGACTTTTTCCCCCCAATAAAAG < 41bp 1 0.469889498586367 1 0.576914489269257 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MDK ENSG00000110492 UTR3 Human protein_coding chr11:46405337 chr11:46405326 . . 0 hm6A_associated_SNPs_12985 0 0 1 4 46405307 46405327 mRNA hsa-miR-190b MDK miRanda miRanda
14034 chr11 46695828 46695828 1 + G A rs141258278 46695816 + 46695796 46695836 41 TGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGAG TGTGAAGAGTCTCAGCCATGACTTTGAGCTGAACTTGGGAG < 41bp 1 0.704305145139381 1 0.955360770225525 experiment 0.591389709721237 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 ATG13 ENSG00000175224 UTR3 Human protein_coding chr11:46695816 chr11:46695828 . . 0 hm6A_associated_SNPs_12989 0 0 1 1 46695816 46695837 mRNA hsa-miR-150 KIAA0652 miRanda miRanda
14034 chr11 46695829 46695829 1 + C G rs150799521 46695816 + 46695796 46695836 41 TGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGAG TGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGGTTGGGAG < 41bp 1 0.698616520214505 1 0.883305311203003 experiment 0.602766959570989 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 ATG13 ENSG00000175224 UTR3 Human protein_coding chr11:46695816 chr11:46695829 . . 0 hm6A_associated_SNPs_12990 0 0 1 1 46695816 46695837 mRNA hsa-miR-150 KIAA0652 miRanda miRanda
14034 chr11 46751085 46751085 1 + G A rs143064939 46751070 + 46751050 46751090 41 GGAGCGGCCGGTCTGCAAGGACTCCACCCGGATCCGCATCA GGAGCGGCCGGTCTGCAAGGACTCCACCCGGATCCACATCA < 41bp 1 0.215635999761756 1 0.277365148067474 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 36 F2 ENSG00000180210 CDS Human protein_coding chr11:46751070 chr11:46751085 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_12994 0 0 1 1 46751073 46751095 mRNA hsa-miR-433 F2 miRanda miRanda
14034 chr11 46761004 46761004 1 + A T rs188001809 46761024 + 46761004 46761044 41 ATTATTTTTGTGTTTCTAAAACTATGGTTCCCAATAAAAGT TTTATTTTTGTGTTTCTAAAACTATGGTTCCCAATAAAAGT < 41bp 1 0.291424225972703 1 0.0834802389144897 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 F2 ENSG00000180210 UTR3 Human protein_coding chr11:46761024 chr11:46761004 . . 0 hm6A_associated_SNPs_12995 0 0 1 1 46760999 46761020 mRNA hsa-miR-494 F2 miRanda miRanda
14034 chr11 47290326 47290326 1 + T C rs375078947 47290324 + 47290304 47290344 41 GCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAAACATTCC GCCTCCTAGAAGTGGAACAGACCGAGAAGGGCAAACATTCC < 41bp 1 0.647534806821496 1 0.951390027999878 experiment 0.704930386357008 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 NR1H3 ENSG00000025434 UTR3 Human protein_coding chr11:47290324 chr11:47290326 . . 0 hm6A_associated_SNPs_13002 0 0 1 3 47290324 47290345 mRNA hsa-miR-1 NR1H3 miRanda miRanda
14034 chr11 47290326 47290326 1 + T C rs375078947 47290324 + 47290304 47290344 41 GCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAAACATTCC GCCTCCTAGAAGTGGAACAGACCGAGAAGGGCAAACATTCC < 41bp 1 0.647534806821496 1 0.951390027999878 experiment 0.704930386357008 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 NR1H3 ENSG00000025434 UTR3 Human protein_coding chr11:47290324 chr11:47290326 . . 0 hm6A_associated_SNPs_13002 0 0 1 3 47290324 47290345 mRNA hsa-miR-206 NR1H3 miRanda miRanda
14034 chr11 47290326 47290326 1 + T C rs375078947 47290324 + 47290304 47290344 41 GCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAAACATTCC GCCTCCTAGAAGTGGAACAGACCGAGAAGGGCAAACATTCC < 41bp 1 0.647534806821496 1 0.951390027999878 experiment 0.704930386357008 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 NR1H3 ENSG00000025434 UTR3 Human protein_coding chr11:47290324 chr11:47290326 . . 0 hm6A_associated_SNPs_13002 0 0 1 3 47290323 47290345 mRNA hsa-miR-613 NR1H3 miRanda miRanda
14034 chr11 47606072 47606072 1 + C G rs145121567 47606060 + 47606040 47606080 41 GGAACGCATGTGGATCCTAGACAGCGCCTTATCTATGATTG GGAACGCATGTGGATCCTAGACAGCGCCTTATGTATGATTG < 41bp 1 0.739121087741888 1 0.569506466388702 experiment 0.521757824516224 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 33 NDUFS3 ENSG00000213619 UTR3 Human protein_coding chr11:47606060 chr11:47606072 . . 0 hm6A_associated_SNPs_13008 0 0 1 2 47606058 47606078 mRNA hsa-miR-376a NDUFS3 miRanda miRanda
14034 chr11 47606072 47606072 1 + C G rs145121567 47606060 + 47606040 47606080 41 GGAACGCATGTGGATCCTAGACAGCGCCTTATCTATGATTG GGAACGCATGTGGATCCTAGACAGCGCCTTATGTATGATTG < 41bp 1 0.739121087741888 1 0.569506466388702 experiment 0.521757824516224 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 33 NDUFS3 ENSG00000213619 UTR3 Human protein_coding chr11:47606060 chr11:47606072 . . 0 hm6A_associated_SNPs_13008 0 0 1 2 47606057 47606078 mRNA hsa-miR-376b NDUFS3 miRanda miRanda
14034 chr11 57508379 57508379 1 + C G rs115411262 57508367 + 57508347 57508387 41 TTGGAGGAGAAATCCCCTGGACTTTCACTAACCCTCTGACA TTGGAGGAGAAATCCCCTGGACTTTCACTAACGCTCTGACA < 41bp 1 0.702780259089132 1 0.899941444396973 experiment 0.594439481821736 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 TMX2-CTNND1 ENSG00000213593 UTR3 Human protein_coding chr11:57508367 chr11:57508379 . . 0 hm6A_associated_SNPs_13021 0 0 1 1 57508377 57508398 mRNA hsa-miR-491-5p TMX2 miRanda miRanda
14034 chr11 57508379 57508379 1 + C G rs115411262 57508377 + 57508357 57508397 41 AATCCCCTGGACTTTCACTAACCCTCTGACATACTCCCCAC AATCCCCTGGACTTTCACTAACGCTCTGACATACTCCCCAC Direct Loss 1 0.517202445782141 1 0.506309509277344 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 TMX2-CTNND1 ENSG00000213593 UTR3 Human protein_coding chr11:57508377 chr11:57508379 . . 0 hm6A_associated_SNPs_13022 0 0 1 1 57508377 57508398 mRNA hsa-miR-491-5p TMX2 miRanda miRanda
14034 chr11 57508379 57508379 1 + C G rs115411262 57508385 + 57508365 57508405 41 GGACTTTCACTAACCCTCTGACATACTCCCCACACCCAGTT GGACTTTCACTAACGCTCTGACATACTCCCCACACCCAGTT < 41bp 1 0.440422213404523 1 0.569048047065735 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 15 TMX2-CTNND1 ENSG00000213593 UTR3 Human protein_coding chr11:57508385 chr11:57508379 . . 0 hm6A_associated_SNPs_13023 0 0 1 1 57508377 57508398 mRNA hsa-miR-491-5p TMX2 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585757 + 57585737 57585777 41 CTCTCTTTTGTTTATAAAAAACACTAAACATTCAATTCCAG CTCTCTTTTGTTTATAAAAAACACTAAACATTCAGTTCCAG < 41bp 1 0.561391808204645 1 0.0883170962333679 experiment 0.87721638359071 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 35 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585757 chr11:57585771 . . 0 hm6A_associated_SNPs_13025 0 0 1 4 57585753 57585771 mRNA hsa-miR-206 CTNND1 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585757 + 57585737 57585777 41 CTCTCTTTTGTTTATAAAAAACACTAAACATTCAATTCCAG CTCTCTTTTGTTTATAAAAAACACTAAACATTCAGTTCCAG < 41bp 1 0.561391808204645 1 0.0883170962333679 experiment 0.87721638359071 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 35 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585757 chr11:57585771 . . 0 hm6A_associated_SNPs_13025 0 0 1 4 57585758 57585780 mRNA hsa-miR-330-5p CTNND1 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585757 + 57585737 57585777 41 CTCTCTTTTGTTTATAAAAAACACTAAACATTCAATTCCAG CTCTCTTTTGTTTATAAAAAACACTAAACATTCAGTTCCAG < 41bp 1 0.561391808204645 1 0.0883170962333679 experiment 0.87721638359071 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 35 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585757 chr11:57585771 . . 0 hm6A_associated_SNPs_13025 0 0 1 4 57585761 57585780 mRNA hsa-miR-326 CTNND1 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585757 + 57585737 57585777 41 CTCTCTTTTGTTTATAAAAAACACTAAACATTCAATTCCAG CTCTCTTTTGTTTATAAAAAACACTAAACATTCAGTTCCAG < 41bp 1 0.561391808204645 1 0.0883170962333679 experiment 0.87721638359071 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 35 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585757 chr11:57585771 . . 0 hm6A_associated_SNPs_13025 0 0 1 4 57585752 57585771 mRNA hsa-miR-613 CTNND1 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585764 + 57585744 57585784 41 TTGTTTATAAAAAACACTAAACATTCAATTCCAGAGAACCA TTGTTTATAAAAAACACTAAACATTCAGTTCCAGAGAACCA < 41bp 1 0.537343845813724 1 0.321311622858047 experiment 0.925312308372551 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585764 chr11:57585771 . . 0 hm6A_associated_SNPs_13026 0 0 1 4 57585753 57585771 mRNA hsa-miR-206 CTNND1 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585764 + 57585744 57585784 41 TTGTTTATAAAAAACACTAAACATTCAATTCCAGAGAACCA TTGTTTATAAAAAACACTAAACATTCAGTTCCAGAGAACCA < 41bp 1 0.537343845813724 1 0.321311622858047 experiment 0.925312308372551 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585764 chr11:57585771 . . 0 hm6A_associated_SNPs_13026 0 0 1 4 57585758 57585780 mRNA hsa-miR-330-5p CTNND1 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585764 + 57585744 57585784 41 TTGTTTATAAAAAACACTAAACATTCAATTCCAGAGAACCA TTGTTTATAAAAAACACTAAACATTCAGTTCCAGAGAACCA < 41bp 1 0.537343845813724 1 0.321311622858047 experiment 0.925312308372551 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585764 chr11:57585771 . . 0 hm6A_associated_SNPs_13026 0 0 1 4 57585761 57585780 mRNA hsa-miR-326 CTNND1 miRanda miRanda
14034 chr11 57585771 57585771 1 + A G rs375471831 57585764 + 57585744 57585784 41 TTGTTTATAAAAAACACTAAACATTCAATTCCAGAGAACCA TTGTTTATAAAAAACACTAAACATTCAGTTCCAGAGAACCA < 41bp 1 0.537343845813724 1 0.321311622858047 experiment 0.925312308372551 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 TMX2-CTNND1 ENSG00000198561 UTR3 Human protein_coding chr11:57585764 chr11:57585771 . . 0 hm6A_associated_SNPs_13026 0 0 1 4 57585752 57585771 mRNA hsa-miR-613 CTNND1 miRanda miRanda
14034 chr11 58388250 58388250 1 + A G rs145240560 58388265 + 58388245 58388285 41 AATGTACTCAAGAAAATTGAACAAATGTAATGGATCAATTT AATGTGCTCAAGAAAATTGAACAAATGTAATGGATCAATTT < 41bp 1 0.512465430639442 1 0.0119961202144623 experiment 0.975069138721115 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 ZFP91-CNTF ENSG00000186660 UTR3 Human protein_coding chr11:58388265 chr11:58388250 . . 0 hm6A_associated_SNPs_13032 0 0 1 1 58388248 58388269 mRNA hsa-miR-375 ZFP91 miRanda miRanda
14034 chr11 58388267 58388267 1 + A G rs527997083 58388265 + 58388245 58388285 41 AATGTACTCAAGAAAATTGAACAAATGTAATGGATCAATTT AATGTACTCAAGAAAATTGAACGAATGTAATGGATCAATTT Direct Loss 1 0.302822518653485 1 0.0395938456058502 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 ZFP91-CNTF ENSG00000186660 UTR3 Human protein_coding chr11:58388265 chr11:58388267 . . 0 hm6A_associated_SNPs_13033 0 0 1 2 58388258 58388280 mRNA hsa-miR-136 ZFP91 miRanda miRanda
14034 chr11 58388267 58388267 1 + A G rs527997083 58388265 + 58388245 58388285 41 AATGTACTCAAGAAAATTGAACAAATGTAATGGATCAATTT AATGTACTCAAGAAAATTGAACGAATGTAATGGATCAATTT Direct Loss 1 0.302822518653485 1 0.0395938456058502 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 ZFP91-CNTF ENSG00000186660 UTR3 Human protein_coding chr11:58388265 chr11:58388267 . . 0 hm6A_associated_SNPs_13033 0 0 1 2 58388248 58388269 mRNA hsa-miR-375 ZFP91 miRanda miRanda
14034 chr11 58920990 58920990 1 + C T rs117969217 58920970 + 58920950 58920990 41 AGAAATGATGAGTGATGAGGACTTGTGAGAATTCAGTCTAC AGAAATGATGAGTGATGAGGACTTGTGAGAATTCAGTCTAT < 41bp 1 0.569770837579975 1 0.695770621299744 experiment 0.86045832484005 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 FAM111A ENSG00000166801 UTR3 Human protein_coding chr11:58920970 chr11:58920990 . . 0 hm6A_associated_SNPs_13048 0 0 1 1 58920978 58920992 mRNA hsa-miR-411 FAM111A miRanda miRanda
14034 chr11 59569356 59569356 1 + G A rs112012200 59569342 + 59569322 59569362 41 GGATAAAAATTGGGTAAAGGACATTTGCTTACCTGCAAATG GGATAAAAATTGGGTAAAGGACATTTGCTTACCTACAAATG < 41bp 1 0.340123567383814 1 0.0762848854064941 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 STX3 ENSG00000166900 UTR3 Human protein_coding chr11:59569342 chr11:59569356 . . 0 hm6A_associated_SNPs_13051 0 0 1 1 59569353 59569373 mRNA hsa-miR-128 STX3 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689945 + 60689925 60689965 41 TTCTGCATCTGCGCCAGCAAACATCACTGCCGTTGGTCTCT TTCTGCATCTGCGCCAGCAAACATCACTGCCATTGGTCTCT < 41bp 1 0.399992926374225 1 0.19381856918335 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 32 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689945 chr11:60689956 . . 0 hm6A_associated_SNPs_13066 0 0 1 4 60689934 60689956 mRNA hsa-miR-34a TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689945 + 60689925 60689965 41 TTCTGCATCTGCGCCAGCAAACATCACTGCCGTTGGTCTCT TTCTGCATCTGCGCCAGCAAACATCACTGCCATTGGTCTCT < 41bp 1 0.399992926374225 1 0.19381856918335 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 32 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689945 chr11:60689956 . . 0 hm6A_associated_SNPs_13066 0 0 1 4 60689934 60689956 mRNA hsa-miR-34c-5p TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689945 + 60689925 60689965 41 TTCTGCATCTGCGCCAGCAAACATCACTGCCGTTGGTCTCT TTCTGCATCTGCGCCAGCAAACATCACTGCCATTGGTCTCT < 41bp 1 0.399992926374225 1 0.19381856918335 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 32 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689945 chr11:60689956 . . 0 hm6A_associated_SNPs_13066 0 0 1 4 60689937 60689956 mRNA hsa-miR-449a TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689945 + 60689925 60689965 41 TTCTGCATCTGCGCCAGCAAACATCACTGCCGTTGGTCTCT TTCTGCATCTGCGCCAGCAAACATCACTGCCATTGGTCTCT < 41bp 1 0.399992926374225 1 0.19381856918335 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 32 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689945 chr11:60689956 . . 0 hm6A_associated_SNPs_13066 0 0 1 4 60689937 60689956 mRNA hsa-miR-449b TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689970 + 60689950 60689990 41 ACTGCCGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC ACTGCCATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC < 41bp 1 0.361168835099912 1 0.815572500228882 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689970 chr11:60689956 . . 0 hm6A_associated_SNPs_13067 0 0 1 4 60689934 60689956 mRNA hsa-miR-34a TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689970 + 60689950 60689990 41 ACTGCCGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC ACTGCCATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC < 41bp 1 0.361168835099912 1 0.815572500228882 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689970 chr11:60689956 . . 0 hm6A_associated_SNPs_13067 0 0 1 4 60689934 60689956 mRNA hsa-miR-34c-5p TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689970 + 60689950 60689990 41 ACTGCCGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC ACTGCCATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC < 41bp 1 0.361168835099912 1 0.815572500228882 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689970 chr11:60689956 . . 0 hm6A_associated_SNPs_13067 0 0 1 4 60689937 60689956 mRNA hsa-miR-449a TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689970 + 60689950 60689990 41 ACTGCCGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC ACTGCCATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGC < 41bp 1 0.361168835099912 1 0.815572500228882 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689970 chr11:60689956 . . 0 hm6A_associated_SNPs_13067 0 0 1 4 60689937 60689956 mRNA hsa-miR-449b TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689975 + 60689955 60689995 41 CGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG CATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG < 41bp 1 0.23977890717514 1 0.532615661621094 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689975 chr11:60689956 . . 0 hm6A_associated_SNPs_13068 0 0 1 4 60689934 60689956 mRNA hsa-miR-34a TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689975 + 60689955 60689995 41 CGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG CATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG < 41bp 1 0.23977890717514 1 0.532615661621094 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689975 chr11:60689956 . . 0 hm6A_associated_SNPs_13068 0 0 1 4 60689934 60689956 mRNA hsa-miR-34c-5p TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689975 + 60689955 60689995 41 CGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG CATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG < 41bp 1 0.23977890717514 1 0.532615661621094 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689975 chr11:60689956 . . 0 hm6A_associated_SNPs_13068 0 0 1 4 60689937 60689956 mRNA hsa-miR-449a TMEM109 miRanda miRanda
14034 chr11 60689956 60689956 1 + G A rs147127792 60689975 + 60689955 60689995 41 CGTTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG CATTGGTCTCTCATGACTTAACTGGCTTCCCTCTGCTGCTG < 41bp 1 0.23977890717514 1 0.532615661621094 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689975 chr11:60689956 . . 0 hm6A_associated_SNPs_13068 0 0 1 4 60689937 60689956 mRNA hsa-miR-449b TMEM109 miRanda miRanda
14034 chr11 60690115 60690115 1 + T C rs555677139 60690108 + 60690088 60690128 41 CTACCCTGTACTCCCACCAAACCATGGTCCTTTAAGGCACG CTACCCTGTACTCCCACCAAACCATGGCCCTTTAAGGCACG < 41bp 1 0.116176836912438 1 0.0495966672897339 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60690108 chr11:60690115 . . 0 hm6A_associated_SNPs_13069 0 0 1 1 60690111 60690131 mRNA hsa-miR-22 TMEM109 miRanda miRanda
14034 chr11 60690124 60690124 1 + G A rs77661705 60690108 + 60690088 60690128 41 CTACCCTGTACTCCCACCAAACCATGGTCCTTTAAGGCACG CTACCCTGTACTCCCACCAAACCATGGTCCTTTAAGACACG < 41bp 1 0.114495620010887 1 0.0422880053520203 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60690108 chr11:60690124 . . 0 hm6A_associated_SNPs_13070 0 0 1 1 60690111 60690131 mRNA hsa-miR-22 TMEM109 miRanda miRanda
14034 chr11 60690125 60690125 1 + C A rs1044765 60690108 + 60690088 60690128 41 CTACCCTGTACTCCCACCAAACCATGGTCCTTTAAGGCACG CTACCCTGTACTCCCACCAAACCATGGTCCTTTAAGGAACG < 41bp 1 0.110119469171278 1 0.0652222037315369 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60690108 chr11:60690125 . . 0 hm6A_associated_SNPs_13071 0 0 1 1 60690111 60690131 mRNA hsa-miR-22 TMEM109 miRanda miRanda
14034 chr11 61553985 61553985 1 + C T rs184526863 61553994 + 61553974 61554014 41 CCCTTGCCTCCCCTTTTGAGACTGGAGCCAACCCTTTTGGA CCCTTGCCTCCTCTTTTGAGACTGGAGCCAACCCTTTTGGA < 41bp 1 0.1617410469065 1 0.976139903068542 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 MYRF ENSG00000124920 UTR3 Human protein_coding chr11:61553994 chr11:61553985 . . 0 hm6A_associated_SNPs_13081 0 0 1 1 61553980 61554003 mRNA hsa-miR-24 C11orf9 miRanda miRanda
14034 chr11 61920183 61920183 1 + G A rs1675066 61920175 + 61920155 61920195 41 TGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCT TGCTGCTCAGGTGCAAATGGACTTGAGAACATCTATGTGCT < 41bp 1 0.616504734712217 1 0.988298892974854 experiment 0.766990530575567 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 INCENP ENSG00000149503 UTR3 Human protein_coding chr11:61920175 chr11:61920183 . . 0 hm6A_associated_SNPs_13095 0 0 1 1 61920169 61920193 mRNA hsa-miR-376c INCENP miRanda miRanda
14034 chr11 62439759 62439759 1 + C G rs72927298 62439747 + 62439727 62439767 41 GGTGAGCACGTTTCCCCCAAACCCTGGACTGACTGCTTTAA GGTGAGCACGTTTCCCCCAAACCCTGGACTGAGTGCTTTAA < 41bp 1 0.281376844382411 1 0.913776516914368 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 UQCC3 ENSG00000204922 UTR3 Human protein_coding chr11:62439747 chr11:62439759 . . 0 hm6A_associated_SNPs_13101 0 0 1 4 62439742 62439764 mRNA hsa-miR-15a C11orf83 miRanda miRanda
14034 chr11 62439759 62439759 1 + C G rs72927298 62439747 + 62439727 62439767 41 GGTGAGCACGTTTCCCCCAAACCCTGGACTGACTGCTTTAA GGTGAGCACGTTTCCCCCAAACCCTGGACTGAGTGCTTTAA < 41bp 1 0.281376844382411 1 0.913776516914368 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 UQCC3 ENSG00000204922 UTR3 Human protein_coding chr11:62439747 chr11:62439759 . . 0 hm6A_associated_SNPs_13101 0 0 1 4 62439742 62439764 mRNA hsa-miR-15b C11orf83 miRanda miRanda
14034 chr11 62439759 62439759 1 + C G rs72927298 62439747 + 62439727 62439767 41 GGTGAGCACGTTTCCCCCAAACCCTGGACTGACTGCTTTAA GGTGAGCACGTTTCCCCCAAACCCTGGACTGAGTGCTTTAA < 41bp 1 0.281376844382411 1 0.913776516914368 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 UQCC3 ENSG00000204922 UTR3 Human protein_coding chr11:62439747 chr11:62439759 . . 0 hm6A_associated_SNPs_13101 0 0 1 4 62439742 62439764 mRNA hsa-miR-424 C11orf83 miRanda miRanda
14034 chr11 62439759 62439759 1 + C G rs72927298 62439747 + 62439727 62439767 41 GGTGAGCACGTTTCCCCCAAACCCTGGACTGACTGCTTTAA GGTGAGCACGTTTCCCCCAAACCCTGGACTGAGTGCTTTAA < 41bp 1 0.281376844382411 1 0.913776516914368 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 UQCC3 ENSG00000204922 UTR3 Human protein_coding chr11:62439747 chr11:62439759 . . 0 hm6A_associated_SNPs_13101 0 0 1 4 62439743 62439764 mRNA hsa-miR-497 C11orf83 miRanda miRanda
14034 chr11 62529112 62529112 1 + T C rs200126354 62529093 + 62529073 62529113 41 AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGTC AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGCC < 41bp 1 0.400111805352263 1 0.949396371841431 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 POLR2G ENSG00000168002 UTR5 Human protein_coding chr11:62529093 chr11:62529112 . . 0 hm6A_associated_SNPs_13106 0 0 1 4 62529105 62529130 mRNA hsa-miR-30a POLR2G miRanda miRanda
14034 chr11 62529112 62529112 1 + T C rs200126354 62529093 + 62529073 62529113 41 AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGTC AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGCC < 41bp 1 0.400111805352263 1 0.949396371841431 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 POLR2G ENSG00000168002 UTR5 Human protein_coding chr11:62529093 chr11:62529112 . . 0 hm6A_associated_SNPs_13106 0 0 1 4 62529105 62529130 mRNA hsa-miR-30d POLR2G miRanda miRanda
14034 chr11 62529112 62529112 1 + T C rs200126354 62529093 + 62529073 62529113 41 AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGTC AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGCC < 41bp 1 0.400111805352263 1 0.949396371841431 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 POLR2G ENSG00000168002 UTR5 Human protein_coding chr11:62529093 chr11:62529112 . . 0 hm6A_associated_SNPs_13106 0 0 1 4 62529106 62529130 mRNA hsa-miR-30b POLR2G miRanda miRanda
14034 chr11 62529112 62529112 1 + T C rs200126354 62529093 + 62529073 62529113 41 AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGTC AGGGACTGTCGGAGGTGTGGACTCTGCCTGCCTACCTGGCC < 41bp 1 0.400111805352263 1 0.949396371841431 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 POLR2G ENSG00000168002 UTR5 Human protein_coding chr11:62529093 chr11:62529112 . . 0 hm6A_associated_SNPs_13106 0 0 1 4 62529105 62529130 mRNA hsa-miR-30e POLR2G miRanda miRanda
14034 chr11 63313915 63313915 1 + G A rs538583934 63313896 + 63313876 63313916 41 TATGATCTAATTGAAACAAGACTGAAGGATCAATAAACAGC TATGATCTAATTGAAACAAGACTGAAGGATCAATAAACAAC < 41bp 1 0.209922664055668 1 0.988739490509033 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 RARRES3 ENSG00000133321 UTR3 Human protein_coding chr11:63313896 chr11:63313915 . . 0 hm6A_associated_SNPs_13115 0 0 0 1 63313901 63313925 mRNA hsa-miR-34c-5p RARRES3 miRanda miRanda
14034 chr11 63886078 63886078 1 + T A rs564377790 63886088 + 63886068 63886108 41 TTTTTTTTTTTCCCCCCTGAACTGGAAGGATACTACCTGTA TTTTTTTTTTACCCCCCTGAACTGGAAGGATACTACCTGTA < 41bp 1 0.267468848887094 1 0.972484588623047 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 FLRT1 ENSG00000256341 ncRNA_exonic Human antisense chr11:63886088 chr11:63886078 . . 0 hm6A_associated_SNPs_13128 0 0 0 1 63886072 63886094 mRNA hsa-miR-145 FLRT1 miRanda miRanda
14034 chr11 64124961 64124961 1 + C A rs148956691 64124960 + 64124940 64124980 41 TGGGCTGATCTTGAGCCTTAACTGGACATGAGGGGCATGAG TGGGCTGATCTTGAGCCTTAAATGGACATGAGGGGCATGAG Direct Loss 1 0.132944946976776 1 0.719169020652771 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124960 chr11:64124961 . . 0 hm6A_associated_SNPs_13153 0 0 1 1 64124943 64124966 mRNA hsa-miR-145 CCDC88B miRanda miRanda
14034 chr11 64124961 64124961 1 + C A rs148956691 64124965 + 64124945 64124985 41 TGATCTTGAGCCTTAACTGGACATGAGGGGCATGAGAATAA TGATCTTGAGCCTTAAATGGACATGAGGGGCATGAGAATAA < 41bp 1 0.580180120222926 1 0.868133902549744 experiment 0.839639759554149 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124965 chr11:64124961 . . 0 hm6A_associated_SNPs_13154 0 0 1 1 64124943 64124966 mRNA hsa-miR-145 CCDC88B miRanda miRanda
14034 chr11 64124980 64124980 1 + G A rs542907 64124960 + 64124940 64124980 41 TGGGCTGATCTTGAGCCTTAACTGGACATGAGGGGCATGAG TGGGCTGATCTTGAGCCTTAACTGGACATGAGGGGCATGAA < 41bp 1 0.138235418866527 1 0.7997225522995 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124960 chr11:64124980 . . 0 hm6A_associated_SNPs_13155 0 0 0 2 64124979 64125000 mRNA hsa-miR-24 CCDC88B miRanda miRanda
14034 chr11 64124980 64124980 1 + G A rs542907 64124960 + 64124940 64124980 41 TGGGCTGATCTTGAGCCTTAACTGGACATGAGGGGCATGAG TGGGCTGATCTTGAGCCTTAACTGGACATGAGGGGCATGAA < 41bp 1 0.138235418866527 1 0.7997225522995 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124960 chr11:64124980 . . 0 hm6A_associated_SNPs_13155 0 0 0 2 64124979 64125001 mRNA hsa-miR-24 CCDC88B miRanda miRanda
14034 chr11 64124980 64124980 1 + G A rs542907 64124965 + 64124945 64124985 41 TGATCTTGAGCCTTAACTGGACATGAGGGGCATGAGAATAA TGATCTTGAGCCTTAACTGGACATGAGGGGCATGAAAATAA < 41bp 1 0.493121332027705 1 0.870492696762085 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124965 chr11:64124980 . . 0 hm6A_associated_SNPs_13156 0 0 0 2 64124979 64125000 mRNA hsa-miR-24 CCDC88B miRanda miRanda
14034 chr11 64124980 64124980 1 + G A rs542907 64124965 + 64124945 64124985 41 TGATCTTGAGCCTTAACTGGACATGAGGGGCATGAGAATAA TGATCTTGAGCCTTAACTGGACATGAGGGGCATGAAAATAA < 41bp 1 0.493121332027705 1 0.870492696762085 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124965 chr11:64124980 . . 0 hm6A_associated_SNPs_13156 0 0 0 2 64124979 64125001 mRNA hsa-miR-24 CCDC88B miRanda miRanda
14034 chr11 64124980 64124980 1 + G A rs542907 64124992 + 64124972 64125012 41 GGGCATGAGAATAAAGCTGAACTGCAGCCTCCTGAGTCTTG GGGCATGAAAATAAAGCTGAACTGCAGCCTCCTGAGTCTTG < 41bp 1 0.606834022895032 1 0.844873607158661 experiment 0.786331954209937 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124992 chr11:64124980 . . 0 hm6A_associated_SNPs_13157 0 0 0 2 64124979 64125000 mRNA hsa-miR-24 CCDC88B miRanda miRanda
14034 chr11 64124980 64124980 1 + G A rs542907 64124992 + 64124972 64125012 41 GGGCATGAGAATAAAGCTGAACTGCAGCCTCCTGAGTCTTG GGGCATGAAAATAAAGCTGAACTGCAGCCTCCTGAGTCTTG < 41bp 1 0.606834022895032 1 0.844873607158661 experiment 0.786331954209937 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124992 chr11:64124980 . . 0 hm6A_associated_SNPs_13157 0 0 0 2 64124979 64125001 mRNA hsa-miR-24 CCDC88B miRanda miRanda
14034 chr11 64701749 64701749 1 + G A rs188478728 64701750 + 64701730 64701770 41 CCAGCTCACCCTCTACACAGACACTGTCCTGGGTGCACACT CCAGCTCACCCTCTACACAAACACTGTCCTGGGTGCACACT < 41bp 1 0.527057770958349 1 0.00856155157089233 experiment 0.945884458083302 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 PPP2R5B ENSG00000068971 UTR3 Human protein_coding chr11:64701750 chr11:64701749 . . 0 hm6A_associated_SNPs_13159 0 0 0 1 64701747 64701773 mRNA hsa-miR-122 PPP2R5B miRanda miRanda
14034 chr11 64789370 64789370 1 + C A rs11540368 64789380 + 64789360 64789400 41 GGTCCCTCAACCTTCACCAAACACTACCCATGGGGGGTTGG GGTCCCTCAAACTTCACCAAACACTACCCATGGGGGGTTGG < 41bp 1 0.186956253489691 1 0.943275690078735 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 11 ARL2-SNX15 ENSG00000213465 UTR3 Human protein_coding chr11:64789380 chr11:64789370 . . 0 hm6A_associated_SNPs_13163 0 0 1 1 64789365 64789387 mRNA hsa-miR-142-3p ARL2 miRanda miRanda
14034 chr11 64789440 64789440 1 + C A rs2271540 64789420 + 64789400 64789440 41 GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCC GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCA < 41bp 1 0.443983516641247 1 0.937892913818359 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 ARL2-SNX15 ENSG00000213465 UTR3 Human protein_coding chr11:64789420 chr11:64789440 . . 0 hm6A_associated_SNPs_13164 0 0 1 5 64789433 64789455 mRNA hsa-miR-15a ARL2 miRanda miRanda
14034 chr11 64789440 64789440 1 + C A rs2271540 64789420 + 64789400 64789440 41 GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCC GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCA < 41bp 1 0.443983516641247 1 0.937892913818359 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 ARL2-SNX15 ENSG00000213465 UTR3 Human protein_coding chr11:64789420 chr11:64789440 . . 0 hm6A_associated_SNPs_13164 0 0 1 5 64789429 64789450 mRNA hsa-miR-214 ARL2 miRanda miRanda
14034 chr11 64789440 64789440 1 + C A rs2271540 64789420 + 64789400 64789440 41 GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCC GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCA < 41bp 1 0.443983516641247 1 0.937892913818359 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 ARL2-SNX15 ENSG00000213465 UTR3 Human protein_coding chr11:64789420 chr11:64789440 . . 0 hm6A_associated_SNPs_13164 0 0 1 5 64789433 64789455 mRNA hsa-miR-15b ARL2 miRanda miRanda
14034 chr11 64789440 64789440 1 + C A rs2271540 64789420 + 64789400 64789440 41 GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCC GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCA < 41bp 1 0.443983516641247 1 0.937892913818359 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 ARL2-SNX15 ENSG00000213465 UTR3 Human protein_coding chr11:64789420 chr11:64789440 . . 0 hm6A_associated_SNPs_13164 0 0 1 5 64789434 64789455 mRNA hsa-miR-195 ARL2 miRanda miRanda
14034 chr11 64789440 64789440 1 + C A rs2271540 64789420 + 64789400 64789440 41 GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCC GGAGTCAGCCGGCCAAACTAACACTCCCCCTCCTCCACCCA < 41bp 1 0.443983516641247 1 0.937892913818359 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 ARL2-SNX15 ENSG00000213465 UTR3 Human protein_coding chr11:64789420 chr11:64789440 . . 0 hm6A_associated_SNPs_13164 0 0 1 5 64789436 64789455 mRNA hsa-miR-424 ARL2 miRanda miRanda
14034 chr11 64894511 64894511 1 + A G rs142025613 64894519 + 64894499 64894539 41 AAGACAGCTTTCAGTTCCTGACTCCCCAACTTGGTCTCTGC AAGACAGCTTTCGGTTCCTGACTCCCCAACTTGGTCTCTGC < 41bp 1 0.637142281881542 1 0.367583841085434 experiment 0.725715436236917 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 MRPL49 ENSG00000149792 CDS Human protein_coding chr11:64894519 chr11:64894511 synonymous SNV . 0 hm6A_associated_SNPs_13173 0 0 1 1 64894499 64894519 mRNA hsa-miR-873 MRPL49 miRanda miRanda
14034 chr11 64894574 64894574 1 + C G rs114303545 64894558 + 64894538 64894578 41 GCCCTGAAGCAGGGCACTGAACTCTGGGCTGCTTCTCTGTG GCCCTGAAGCAGGGCACTGAACTCTGGGCTGCTTCTGTGTG < 41bp 1 0.640817377646117 1 0.52590411901474 experiment 0.718365244707766 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 MRPL49 ENSG00000149792 UTR3 Human protein_coding chr11:64894558 chr11:64894574 . . 0 hm6A_associated_SNPs_13175 0 0 1 1 64894572 64894595 mRNA hsa-miR-455-5p MRPL49 miRanda miRanda
14034 chr11 65190558 65190558 1 + C T rs189695637 65190542 + 65190522 65190562 41 CCTGGTGGAGGGGGAACTTGACCTCTGGGAGGGCGCCGCTC CCTGGTGGAGGGGGAACTTGACCTCTGGGAGGGCGCTGCTC < 41bp 1 0.127284989399625 1 0.00252097845077515 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190542 chr11:65190558 . . 0 hm6A_associated_SNPs_13193 0 0 1 1 65190544 65190566 lncRNA hsa-miR-335-5p NEAT1 miRanda starBase2
14034 chr11 65191044 65191044 1 + G A rs73484377 65191029 + 65191009 65191049 41 TGCGGCACCTAGCATGTTTGACAGGCGGGGACTGCGAGGCA TGCGGCACCTAGCATGTTTGACAGGCGGGGACTGCAAGGCA < 41bp 1 0.686888850471193 1 0.481838434934616 experiment 0.626222299057613 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191029 chr11:65191044 . . 0 hm6A_associated_SNPs_13194 0 0 1 1 65191031 65191057 lncRNA hsa-miR-503-5p NEAT1 miRanda starBase2
14034 chr11 65191447 65191447 1 + G C rs2239895 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CCAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG < 41bp 1 0.723825694669558 1 0.710635364055634 experiment 0.552348610660883 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191447 . . 0 hm6A_associated_SNPs_13195 0 0 1 1 65191441 65191463 lncRNA hsa-miR-671-3p NEAT1 miRanda starBase2
14034 chr11 65191469 65191469 1 + T A rs139780885 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CGAGCAGATGGAACCGGGAGACAAGGAGTCCCTGGCCAGTG < 41bp 1 0.70981325783603 1 0.708351016044617 experiment 0.580373484327941 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191469 . . 0 hm6A_associated_SNPs_13196 0 0 1 3 65191466 65191486 lncRNA hsa-miR-193a-3p NEAT1 miRanda starBase2
14034 chr11 65191469 65191469 1 + T A rs139780885 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CGAGCAGATGGAACCGGGAGACAAGGAGTCCCTGGCCAGTG < 41bp 1 0.70981325783603 1 0.708351016044617 experiment 0.580373484327941 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191469 . . 0 hm6A_associated_SNPs_13196 0 0 1 3 65191460 65191486 lncRNA hsa-miR-193b-3p NEAT1 miRanda starBase2
14034 chr11 65191469 65191469 1 + T A rs139780885 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CGAGCAGATGGAACCGGGAGACAAGGAGTCCCTGGCCAGTG < 41bp 1 0.70981325783603 1 0.708351016044617 experiment 0.580373484327941 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191469 . . 0 hm6A_associated_SNPs_13196 0 0 1 3 65191469 65191491 lncRNA hsa-miR-342-3p NEAT1 miRanda starBase2
14034 chr11 65191484 65191484 1 + G A rs573850339 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAATG < 41bp 1 0.752189148893686 1 0.66703736782074 experiment 0.495621702212627 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191484 . . 0 hm6A_associated_SNPs_13197 0 0 1 4 65191466 65191486 lncRNA hsa-miR-193a-3p NEAT1 miRanda starBase2
14034 chr11 65191484 65191484 1 + G A rs573850339 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAATG < 41bp 1 0.752189148893686 1 0.66703736782074 experiment 0.495621702212627 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191484 . . 0 hm6A_associated_SNPs_13197 0 0 1 4 65191460 65191486 lncRNA hsa-miR-193b-3p NEAT1 miRanda starBase2
14034 chr11 65191484 65191484 1 + G A rs573850339 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAATG < 41bp 1 0.752189148893686 1 0.66703736782074 experiment 0.495621702212627 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191484 . . 0 hm6A_associated_SNPs_13197 0 0 1 4 65191479 65191500 lncRNA hsa-miR-3146 NEAT1 miRanda starBase2
14034 chr11 65191484 65191484 1 + G A rs573850339 65191466 + 65191446 65191486 41 CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAGTG CGAGCAGATGGAACCGGGAGACATGGAGTCCCTGGCCAATG < 41bp 1 0.752189148893686 1 0.66703736782074 experiment 0.495621702212627 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191466 chr11:65191484 . . 0 hm6A_associated_SNPs_13197 0 0 1 4 65191469 65191491 lncRNA hsa-miR-342-3p NEAT1 miRanda starBase2
14034 chr11 65191950 65191950 1 + C T rs117102076 65191948 + 65191928 65191968 41 CTTGCAGATGGAGCCCCGTGACCTCTCACCTACCCACCTGT CTTGCAGATGGAGCCCCGTGACTTCTCACCTACCCACCTGT < 41bp 1 0.465759628012871 1 0.650564432144165 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191948 chr11:65191950 . . 0 hm6A_associated_SNPs_13198 0 0 1 2 65191931 65191952 lncRNA hsa-miR-370-5p NEAT1 miRanda starBase2
14034 chr11 65191950 65191950 1 + C T rs117102076 65191948 + 65191928 65191968 41 CTTGCAGATGGAGCCCCGTGACCTCTCACCTACCCACCTGT CTTGCAGATGGAGCCCCGTGACTTCTCACCTACCCACCTGT < 41bp 1 0.465759628012871 1 0.650564432144165 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191948 chr11:65191950 . . 0 hm6A_associated_SNPs_13198 0 0 1 2 65191948 65191969 lncRNA hsa-miR-552-3p NEAT1 miRanda starBase2
14034 chr11 65266972 65266972 1 + A G rs373836160 65266977 + 65266957 65266997 41 ATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACC ATCTTTTAAAAAGAGGTTAAACCGAAGGTGATTAAAAGACC < 41bp 1 0.00935020047824871 1 0.470264971256256 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266977 chr11:65266972 . . 0 hm6A_associated_SNPs_13206 0 0 1 1 65266954 65266975 lncRNA hsa-miR-216b-5p MALAT1 miRanda starBase2
14034 chr11 65267108 65267108 1 + T C rs11540782 65267102 + 65267082 65267122 41 ATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAG ATTGGGAGTGGTAGGATGAAACAATTCGGAGAAGATAGAAG < 41bp 1 0.1562176496846 1 0.82273256778717 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267102 chr11:65267108 . . 0 hm6A_associated_SNPs_13207 0 0 1 2 65267091 65267114 lncRNA hsa-miR-515-5p MALAT1 miRanda starBase2
14034 chr11 65267108 65267108 1 + T C rs11540782 65267102 + 65267082 65267122 41 ATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAG ATTGGGAGTGGTAGGATGAAACAATTCGGAGAAGATAGAAG < 41bp 1 0.1562176496846 1 0.82273256778717 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267102 chr11:65267108 . . 0 hm6A_associated_SNPs_13207 0 0 1 2 65267092 65267114 lncRNA hsa-miR-519e-5p MALAT1 miRanda starBase2
14034 chr11 65267892 65267892 1 + G A rs528557696 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GATTCAATGAATCTAGGAAGACAGCAGCAGACAGGATTCCA < 41bp 1 0.21095339426376 1 0.984756112098694 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 7 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267892 . . 0 hm6A_associated_SNPs_13209 0 0 1 1 65267882 65267905 lncRNA hsa-miR-384 MALAT1 miRanda starBase2
14034 chr11 65267897 65267897 1 + T C rs142149322 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GATTCAGTGAACCTAGGAAGACAGCAGCAGACAGGATTCCA < 41bp 1 0.213648241925176 1 0.985131084918976 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267897 . . 0 hm6A_associated_SNPs_13210 0 0 1 1 65267882 65267905 lncRNA hsa-miR-384 MALAT1 miRanda starBase2
14034 chr11 65267897 65267897 1 + T C rs142149322 65267916 + 65267896 65267936 41 ATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTG ACCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTG < 41bp 1 0.215068771528589 1 0.993181645870209 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267916 chr11:65267897 . . 0 hm6A_associated_SNPs_13211 0 0 1 1 65267882 65267905 lncRNA hsa-miR-384 MALAT1 miRanda starBase2
14034 chr11 65268198 65268198 1 + G A rs7927113 65268190 + 65268170 65268210 41 TTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAA TTGTGCGTAGAGGATCCTAGACCAGCATACCAGTGTGCCAA < 41bp 1 0.0201002403876087 1 0.81530237197876 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268190 chr11:65268198 . . 0 hm6A_associated_SNPs_13213 0 0 1 3 65268189 65268213 lncRNA hsa-miR-212-5p MALAT1 miRanda starBase2
14034 chr11 65268198 65268198 1 + G A rs7927113 65268190 + 65268170 65268210 41 TTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAA TTGTGCGTAGAGGATCCTAGACCAGCATACCAGTGTGCCAA < 41bp 1 0.0201002403876087 1 0.81530237197876 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268190 chr11:65268198 . . 0 hm6A_associated_SNPs_13213 0 0 1 3 65268189 65268211 lncRNA hsa-miR-1271-5p MALAT1 miRanda starBase2
14034 chr11 65268198 65268198 1 + G A rs7927113 65268190 + 65268170 65268210 41 TTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAA TTGTGCGTAGAGGATCCTAGACCAGCATACCAGTGTGCCAA < 41bp 1 0.0201002403876087 1 0.81530237197876 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268190 chr11:65268198 . . 0 hm6A_associated_SNPs_13213 0 0 1 3 65268189 65268211 lncRNA hsa-miR-96-5p MALAT1 miRanda starBase2
14034 chr11 65268290 65268290 1 + C A rs189575055 65268275 + 65268255 65268295 41 CAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTT CAATATGTTGTTTTTCTGGAACTTACTTATGGTAAACTTTT < 41bp 1 0.0227109838852304 1 0.95389187335968 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268275 chr11:65268290 . . 0 hm6A_associated_SNPs_13214 0 0 1 1 65268269 65268292 lncRNA hsa-miR-409-5p MALAT1 miRanda starBase2
14034 chr11 65268290 65268290 1 + C A rs189575055 65268289 + 65268269 65268309 41 TCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAAT TCTGGAACTTACTTATGGTAAACTTTTATTTATTTTCTAAT Direct Loss 1 0.00620251717992921 1 0.829169273376465 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268289 chr11:65268290 . . 0 hm6A_associated_SNPs_13215 0 0 1 1 65268269 65268292 lncRNA hsa-miR-409-5p MALAT1 miRanda starBase2
14034 chr11 65269495 65269495 1 + T C rs145491101 65269482 + 65269462 65269502 41 AACTTCCAAGTTGGCAAGTAACTCCCAATGATTTAGTTTTT AACTTCCAAGTTGGCAAGTAACTCCCAATGATTCAGTTTTT < 41bp 1 0.0182796563883703 1 0.680752158164978 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269482 chr11:65269495 . . 0 hm6A_associated_SNPs_13222 0 0 1 1 65269489 65269510 lncRNA hsa-miR-625-5p MALAT1 miRanda starBase2
14034 chr11 65269650 65269650 1 + T C rs550967739 65269654 + 65269634 65269674 41 TTGGGGAAGGAAAGTATTGAACTGGGGGTTGGTCTGGCCTA TTGGGGAAGGAAAGTACTGAACTGGGGGTTGGTCTGGCCTA < 41bp 1 0.0772126764125227 1 0.948351502418518 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269654 chr11:65269650 . . 0 hm6A_associated_SNPs_13223 0 0 1 1 65269641 65269662 lncRNA hsa-miR-361-3p MALAT1 miRanda starBase2
14034 chr11 65270650 65270650 1 + C T rs114213656 65270642 + 65270622 65270662 41 ATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAG ATTTCATCTGGGAGCAGAAAACAGCAGGTAGCTGTTAACAG < 41bp 1 0.205374771967152 1 0.410732060670853 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270642 chr11:65270650 . . 0 hm6A_associated_SNPs_13228 0 0 1 3 65270634 65270655 lncRNA hsa-miR-22-3p MALAT1 miRanda starBase2
14034 chr11 65270650 65270650 1 + C T rs114213656 65270642 + 65270622 65270662 41 ATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAG ATTTCATCTGGGAGCAGAAAACAGCAGGTAGCTGTTAACAG < 41bp 1 0.205374771967152 1 0.410732060670853 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270642 chr11:65270650 . . 0 hm6A_associated_SNPs_13228 0 0 1 3 65270629 65270650 lncRNA hsa-miR-370-3p MALAT1 miRanda starBase2
14034 chr11 65270650 65270650 1 + C T rs114213656 65270642 + 65270622 65270662 41 ATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAG ATTTCATCTGGGAGCAGAAAACAGCAGGTAGCTGTTAACAG < 41bp 1 0.205374771967152 1 0.410732060670853 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270642 chr11:65270650 . . 0 hm6A_associated_SNPs_13228 0 0 1 3 65270629 65270650 lncRNA hsa-miR-6893-3p MALAT1 miRanda starBase2
14034 chr11 65271289 65271289 1 + A C rs145156627 65271280 + 65271260 65271300 41 GTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAA GTAACTTTAAGGCAGGAAAGACAAATTTTCTTCTTCATAAA < 41bp 1 0.155578845334349 1 0.0927866101264954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 30 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271280 chr11:65271289 . . 0 hm6A_associated_SNPs_13229 0 0 1 1 65271270 65271291 lncRNA hsa-miR-3163 MALAT1 miRanda starBase2
14034 chr11 65271782 65271782 1 + T C rs376975870 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTCTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG < 41bp 1 0.295625491028437 1 0.30503523349762 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 6 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271782 . . 0 hm6A_associated_SNPs_13231 0 0 1 1 65271780 65271805 lncRNA hsa-miR-3611 MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTCTAAACAAG < 41bp 1 0.435530841022515 1 0.899320244789124 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272162 . . 0 hm6A_associated_SNPs_13234 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTCTAAACAAG < 41bp 1 0.435530841022515 1 0.899320244789124 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272162 . . 0 hm6A_associated_SNPs_13234 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTCTAAACAAG < 41bp 1 0.435530841022515 1 0.899320244789124 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272162 . . 0 hm6A_associated_SNPs_13234 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTCTAAACAAG < 41bp 1 0.435530841022515 1 0.899320244789124 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272162 . . 0 hm6A_associated_SNPs_13234 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTCTAAACAAG < 41bp 1 0.435530841022515 1 0.899320244789124 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272162 . . 0 hm6A_associated_SNPs_13234 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTCTAAACAAG < 41bp 1 0.435530841022515 1 0.899320244789124 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272162 . . 0 hm6A_associated_SNPs_13234 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTCTAAACAAGCAACAGT < 41bp 1 0.211610364022992 1 0.947551965713501 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272162 . . 0 hm6A_associated_SNPs_13235 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTCTAAACAAGCAACAGT < 41bp 1 0.211610364022992 1 0.947551965713501 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272162 . . 0 hm6A_associated_SNPs_13235 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTCTAAACAAGCAACAGT < 41bp 1 0.211610364022992 1 0.947551965713501 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272162 . . 0 hm6A_associated_SNPs_13235 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTCTAAACAAGCAACAGT < 41bp 1 0.211610364022992 1 0.947551965713501 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272162 . . 0 hm6A_associated_SNPs_13235 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTCTAAACAAGCAACAGT < 41bp 1 0.211610364022992 1 0.947551965713501 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272162 . . 0 hm6A_associated_SNPs_13235 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTCTAAACAAGCAACAGT < 41bp 1 0.211610364022992 1 0.947551965713501 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272162 . . 0 hm6A_associated_SNPs_13235 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTCTAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.161870020047042 1 0.867243766784668 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272162 . . 0 hm6A_associated_SNPs_13236 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTCTAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.161870020047042 1 0.867243766784668 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272162 . . 0 hm6A_associated_SNPs_13236 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTCTAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.161870020047042 1 0.867243766784668 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272162 . . 0 hm6A_associated_SNPs_13236 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272162 65272162 1 + C T rs144303913 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTCTAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.161870020047042 1 0.867243766784668 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272162 . . 0 hm6A_associated_SNPs_13236 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTCTAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.161870020047042 1 0.867243766784668 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272162 . . 0 hm6A_associated_SNPs_13236 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272162 65272162 1 + C T rs144303913 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTCTAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.161870020047042 1 0.867243766784668 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 18 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272162 . . 0 hm6A_associated_SNPs_13236 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 65272383 65272383 1 + C A rs60151940 65272372 + 65272352 65272392 41 AGCCTATTTACTTTAAATAAACCAAACATTCCATTTTAAAT AGCCTATTTACTTTAAATAAACCAAACATTCAATTTTAAAT < 41bp 1 0.0797372390294095 1 0.588579416275024 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272372 chr11:65272383 . . 0 hm6A_associated_SNPs_13238 0 0 1 3 65272363 65272384 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272383 65272383 1 + C A rs60151940 65272372 + 65272352 65272392 41 AGCCTATTTACTTTAAATAAACCAAACATTCCATTTTAAAT AGCCTATTTACTTTAAATAAACCAAACATTCAATTTTAAAT < 41bp 1 0.0797372390294095 1 0.588579416275024 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272372 chr11:65272383 . . 0 hm6A_associated_SNPs_13238 0 0 1 3 65272363 65272384 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272383 65272383 1 + C A rs60151940 65272372 + 65272352 65272392 41 AGCCTATTTACTTTAAATAAACCAAACATTCCATTTTAAAT AGCCTATTTACTTTAAATAAACCAAACATTCAATTTTAAAT < 41bp 1 0.0797372390294095 1 0.588579416275024 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272372 chr11:65272383 . . 0 hm6A_associated_SNPs_13238 0 0 1 3 65272363 65272384 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 65272383 65272383 1 + C A rs60151940 65272377 + 65272357 65272397 41 ATTTACTTTAAATAAACCAAACATTCCATTTTAAATGTGGG ATTTACTTTAAATAAACCAAACATTCAATTTTAAATGTGGG < 41bp 1 0.205038307734872 1 0.689556837081909 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272377 chr11:65272383 . . 0 hm6A_associated_SNPs_13239 0 0 1 3 65272363 65272384 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272383 65272383 1 + C A rs60151940 65272377 + 65272357 65272397 41 ATTTACTTTAAATAAACCAAACATTCCATTTTAAATGTGGG ATTTACTTTAAATAAACCAAACATTCAATTTTAAATGTGGG < 41bp 1 0.205038307734872 1 0.689556837081909 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272377 chr11:65272383 . . 0 hm6A_associated_SNPs_13239 0 0 1 3 65272363 65272384 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272383 65272383 1 + C A rs60151940 65272377 + 65272357 65272397 41 ATTTACTTTAAATAAACCAAACATTCCATTTTAAATGTGGG ATTTACTTTAAATAAACCAAACATTCAATTTTAAATGTGGG < 41bp 1 0.205038307734872 1 0.689556837081909 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272377 chr11:65272383 . . 0 hm6A_associated_SNPs_13239 0 0 1 3 65272363 65272384 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 66043951 66043951 1 + G C rs191763879 66043962 + 66043942 66043982 41 TGTGCTGTTGCCTCTAGGTGACTTTCCAAGATGCCCCCCTA TGTGCTGTTCCCTCTAGGTGACTTTCCAAGATGCCCCCCTA < 41bp 1 0.771610563485458 1 0.526885271072388 experiment 0.456778873029085 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 RAB1B ENSG00000245156 ncRNA_intronic Human lincRNA chr11:66043962 chr11:66043951 . . 0 hm6A_associated_SNPs_13264 0 0 1 1 66043945 66043966 mRNA hsa-miR-224 RAB1B miRanda miRanda
14034 chr11 66394655 66394655 1 + A G rs535565284 66394642 + 66394622 66394662 41 GAGACTGAGTTCCTGTTGGGACAGTCAGTTGGTATGTATCC GAGACTGAGTTCCTGTTGGGACAGTCAGTTGGTGTGTATCC < 41bp 1 0.688704692694449 1 0.862662196159363 experiment 0.622590614611103 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 34 RBM14 ENSG00000239306 UTR3 Human protein_coding chr11:66394642 chr11:66394655 . . 0 hm6A_associated_SNPs_13266 0 0 1 1 66394654 66394675 mRNA hsa-miR-214 RBM14 miRanda miRanda
14034 chr11 66744338 66744338 1 + C T rs180834579 66744350 + 66744330 66744370 41 GAAGTCTTCCTCCCTGTGTGACAGAGGGGGAAACTGAGGCC GAAGTCTTTCTCCCTGTGTGACAGAGGGGGAAACTGAGGCC < 41bp 1 0.172706989838721 1 0.855643570423126 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 C11orf86 ENSG00000173237 UTR3 Human protein_coding chr11:66744350 chr11:66744338 . . 0 hm6A_associated_SNPs_13275 0 0 0 1 66744321 66744340 mRNA hsa-miR-7 C11orf86 miRanda miRanda
14034 chr11 67024659 67024659 1 + T A rs540230100 67024646 + 67024626 67024666 41 GTGCCGGGAGAGTGCCTCTGACTTTGGGACATTTCATCCAC GTGCCGGGAGAGTGCCTCTGACTTTGGGACATTACATCCAC < 41bp 1 0.708155088202144 1 0.919577479362488 experiment 0.583689823595711 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 KDM2A ENSG00000173120 UTR3 Human protein_coding chr11:67024646 chr11:67024659 . . 0 hm6A_associated_SNPs_13282 0 0 1 1 67024641 67024662 mRNA hsa-miR-203 KDM2A miRanda miRanda
14034 chr11 67024659 67024659 1 + T A rs540230100 67024654 + 67024634 67024674 41 AGAGTGCCTCTGACTTTGGGACATTTCATCCACAGAAATTT AGAGTGCCTCTGACTTTGGGACATTACATCCACAGAAATTT < 41bp 1 0.693918461806498 1 0.927942633628845 experiment 0.612163076387004 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 KDM2A ENSG00000173120 UTR3 Human protein_coding chr11:67024654 chr11:67024659 . . 0 hm6A_associated_SNPs_13283 0 0 1 1 67024641 67024662 mRNA hsa-miR-203 KDM2A miRanda miRanda
14034 chr11 67804100 67804100 1 + A G rs61329983 67804097 + 67804077 67804117 41 AGCCCCTGCTGCCCAATAAAACCACTCCGACCCCACGGCCT AGCCCCTGCTGCCCAATAAAACCGCTCCGACCCCACGGCCT < 41bp 1 0.212105220223883 1 0.97550094127655 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 24 NDUFS8 ENSG00000110717 UTR3 Human protein_coding chr11:67804097 chr11:67804100 . . 0 hm6A_associated_SNPs_13317 3 0 1 1 67804082 67804103 mRNA hsa-miR-140-5p NDUFS8 miRanda miRanda
14034 chr11 71187555 71187555 1 + C T rs189125385 71187554 + 71187534 71187574 41 TTTCATAGTGGACCAAGTGAACTTCACCCTGAACAAGAATT TTTCATAGTGGACCAAGTGAATTTCACCCTGAACAAGAATT Direct Loss 1 0.237654091951021 1 0.86791980266571 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 NADSYN1 ENSG00000172890 UTR3 Human protein_coding chr11:71187554 chr11:71187555 . . 0 hm6A_associated_SNPs_13394 0 0 1 1 71187541 71187565 mRNA hsa-miR-125a-3p NADSYN1 miRanda miRanda
14034 chr11 72534413 72534413 1 + C T rs369667021 72534405 + 72534385 72534425 41 CACAGGTGTGTACAAGCTTGACTGAGCCCGTCTGTATGTGT CACAGGTGTGTACAAGCTTGACTGAGCCTGTCTGTATGTGT < 41bp 1 0.0641713811553413 1 0.00720620155334473 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 ATG16L2 ENSG00000168010 UTR3 Human protein_coding chr11:72534405 chr11:72534413 . . 0 hm6A_associated_SNPs_13405 0 0 1 2 72534396 72534421 mRNA hsa-miR-208a ATG16L2 miRanda miRanda
14034 chr11 72534413 72534413 1 + C T rs369667021 72534405 + 72534385 72534425 41 CACAGGTGTGTACAAGCTTGACTGAGCCCGTCTGTATGTGT CACAGGTGTGTACAAGCTTGACTGAGCCTGTCTGTATGTGT < 41bp 1 0.0641713811553413 1 0.00720620155334473 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 ATG16L2 ENSG00000168010 UTR3 Human protein_coding chr11:72534405 chr11:72534413 . . 0 hm6A_associated_SNPs_13405 0 0 1 2 72534405 72534428 mRNA hsa-miR-377 ATG16L2 miRanda miRanda
14034 chr11 73008762 73008762 1 + C T rs548333126 73008750 + 73008730 73008770 41 CCCTGTGGGCATGGAGATGGACAGACCTGGGCCTGGCTCTT CCCTGTGGGCATGGAGATGGACAGACCTGGGCTTGGCTCTT < 41bp 1 0.508757703307408 1 0.911068081855774 experiment 0.982484593385185 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 P2RY6 ENSG00000171631 UTR3 Human protein_coding chr11:73008750 chr11:73008762 . . 0 hm6A_associated_SNPs_13410 0 0 0 1 73008750 73008772 mRNA hsa-miR-335 P2RY6 miRanda miRanda
14034 chr11 73008762 73008762 1 + C T rs548333126 73008754 + 73008734 73008774 41 GTGGGCATGGAGATGGACAGACCTGGGCCTGGCTCTTGAGA GTGGGCATGGAGATGGACAGACCTGGGCTTGGCTCTTGAGA < 41bp 1 0.269019347146305 1 0.766979455947876 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 P2RY6 ENSG00000171631 UTR3 Human protein_coding chr11:73008754 chr11:73008762 . . 0 hm6A_associated_SNPs_13411 0 0 0 1 73008750 73008772 mRNA hsa-miR-335 P2RY6 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079136 73079157 mRNA hsa-miR-25 ARHGEF17 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079136 73079157 mRNA hsa-miR-32 ARHGEF17 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079136 73079157 mRNA hsa-miR-92a ARHGEF17 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079129 73079152 mRNA hsa-miR-193a-3p ARHGEF17 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079137 73079157 mRNA hsa-miR-363 ARHGEF17 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079136 73079157 mRNA hsa-miR-367 ARHGEF17 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079129 73079152 mRNA hsa-miR-193b ARHGEF17 miRanda miRanda
14034 chr11 73079145 73079145 1 + G A rs79374284 73079125 + 73079105 73079145 41 AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGG AAAGACACAGCTGGGTCTGGACCCCACGGGGCTGGGGAGGA < 41bp 1 0.547549176440108 1 0.982634902000427 experiment 0.904901647119784 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ARHGEF17 ENSG00000110237 UTR3 Human protein_coding chr11:73079125 chr11:73079145 . . 0 hm6A_associated_SNPs_13414 0 0 0 8 73079136 73079157 mRNA hsa-miR-92b ARHGEF17 miRanda miRanda
14034 chr11 74717956 74717956 1 + C G rs564351865 74717951 + 74717931 74717971 41 GTCAAAATGGAAACCAGGGGACTTACCTTTTCACATGACTT GTCAAAATGGAAACCAGGGGACTTAGCTTTTCACATGACTT < 41bp 1 0.775614059106825 1 0.955805778503418 experiment 0.448771881786351 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 NEU3 ENSG00000162139 UTR3 Human protein_coding chr11:74717951 chr11:74717956 . . 0 hm6A_associated_SNPs_13425 0 0 1 2 74717937 74717959 mRNA hsa-miR-196a NEU3 miRanda miRanda
14034 chr11 74717956 74717956 1 + C G rs564351865 74717951 + 74717931 74717971 41 GTCAAAATGGAAACCAGGGGACTTACCTTTTCACATGACTT GTCAAAATGGAAACCAGGGGACTTAGCTTTTCACATGACTT < 41bp 1 0.775614059106825 1 0.955805778503418 experiment 0.448771881786351 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 NEU3 ENSG00000162139 UTR3 Human protein_coding chr11:74717951 chr11:74717956 . . 0 hm6A_associated_SNPs_13425 0 0 1 2 74717937 74717959 mRNA hsa-miR-196b NEU3 miRanda miRanda
14034 chr11 75283344 75283344 1 + C T rs111736118 75283349 + 75283329 75283369 41 CCATGATGCTGAGCCCGGAAACTCCACATCCTGTGGGACCT CCATGATGCTGAGCCTGGAAACTCCACATCCTGTGGGACCT < 41bp 1 0.40423645026978 1 0.883277833461761 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 SERPINH1 ENSG00000149257 UTR3 Human protein_coding chr11:75283349 chr11:75283344 . . 0 hm6A_associated_SNPs_13433 0 0 1 1 75283322 75283344 mRNA hsa-miR-24 SERPINH1 miRanda miRanda
14034 chr11 75694549 75694549 1 + A C rs61749241 75694552 + 75694532 75694572 41 GCAACAAATTGCATTACAAGACAAAGGTGAGTGGAAATACC GCAACAAATTGCATTACCAGACAAAGGTGAGTGGAAATACC < 41bp 1 0.352331325196175 1 0.511343538761139 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75694552 chr11:75694549 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_13441 0 0 1 1 75694534 75694554 mRNA hsa-miR-431 UVRAG miRanda miRanda
14034 chr11 76917220 76917220 1 + A G rs2276293 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAGGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.176787262400668 1 0.758544147014618 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917220 synonymous SNV . 0 hm6A_associated_SNPs_13453 4 0 0 1 76917208 76917228 mRNA hsa-miR-411 MYO7A miRanda miRanda
14034 chr11 82645504 82645504 1 + G A rs7927201 82645491 + 82645471 82645511 41 TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTA TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTAGGAGCTA < 41bp 1 0.0669255172878309 1 0.982265591621399 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645491 chr11:82645504 . . 0 hm6A_associated_SNPs_13464 0 0 1 2 82645502 82645521 mRNA hsa-miR-124 C11orf82 miRanda miRanda
14034 chr11 82645504 82645504 1 + G A rs7927201 82645491 + 82645471 82645511 41 TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTA TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTAGGAGCTA < 41bp 1 0.0669255172878309 1 0.982265591621399 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645491 chr11:82645504 . . 0 hm6A_associated_SNPs_13464 0 0 1 2 82645498 82645521 mRNA hsa-miR-506 C11orf82 miRanda miRanda
14034 chr11 82645504 82645504 1 + G A rs7927201 82645496 + 82645476 82645516 41 AGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTG AGAAGCAAATTGAAAACAGGACTCTGCTAGGAGCTACTGTG < 41bp 1 0.149656241671567 1 0.996090888977051 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645496 chr11:82645504 . . 0 hm6A_associated_SNPs_13465 0 0 1 2 82645502 82645521 mRNA hsa-miR-124 C11orf82 miRanda miRanda
14034 chr11 82645504 82645504 1 + G A rs7927201 82645496 + 82645476 82645516 41 AGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTG AGAAGCAAATTGAAAACAGGACTCTGCTAGGAGCTACTGTG < 41bp 1 0.149656241671567 1 0.996090888977051 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645496 chr11:82645504 . . 0 hm6A_associated_SNPs_13465 0 0 1 2 82645498 82645521 mRNA hsa-miR-506 C11orf82 miRanda miRanda
14034 chr11 82645508 82645508 1 + G A rs555111318 82645491 + 82645471 82645511 41 TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTA TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAACTA < 41bp 1 0.0758576031559552 1 0.982425630092621 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645491 chr11:82645508 . . 0 hm6A_associated_SNPs_13466 0 0 1 2 82645502 82645521 mRNA hsa-miR-124 C11orf82 miRanda miRanda
14034 chr11 82645508 82645508 1 + G A rs555111318 82645491 + 82645471 82645511 41 TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTA TGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAACTA < 41bp 1 0.0758576031559552 1 0.982425630092621 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645491 chr11:82645508 . . 0 hm6A_associated_SNPs_13466 0 0 1 2 82645498 82645521 mRNA hsa-miR-506 C11orf82 miRanda miRanda
14034 chr11 82645508 82645508 1 + G A rs555111318 82645496 + 82645476 82645516 41 AGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTG AGAAGCAAATTGAAAACAGGACTCTGCTGGGAACTACTGTG < 41bp 1 0.151851916465433 1 0.996074557304382 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645496 chr11:82645508 . . 0 hm6A_associated_SNPs_13467 0 0 1 2 82645502 82645521 mRNA hsa-miR-124 C11orf82 miRanda miRanda
14034 chr11 82645508 82645508 1 + G A rs555111318 82645496 + 82645476 82645516 41 AGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTG AGAAGCAAATTGAAAACAGGACTCTGCTGGGAACTACTGTG < 41bp 1 0.151851916465433 1 0.996074557304382 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 DDIAS ENSG00000165490 UTR3 Human protein_coding chr11:82645496 chr11:82645508 . . 0 hm6A_associated_SNPs_13467 0 0 1 2 82645498 82645521 mRNA hsa-miR-506 C11orf82 miRanda miRanda
14034 chr11 85347268 85347268 1 + G A rs146322392 85347256 + 85347236 85347276 41 TTGAAGAGACACTTGAGAAAACTATACATGAAGAGTAACCA TTGAAGAGACACTTGAGAAAACTATACATGAAAAGTAACCA < 41bp 1 0.387668446755223 1 0.720254898071289 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 TMEM126B ENSG00000171204 CDS Human protein_coding chr11:85347256 chr11:85347268 nonsynonymous SNV 0.690 1 hm6A_associated_SNPs_13474 0 0 1 2 85347261 85347281 mRNA hsa-miR-129-5p TMEM126B miRanda miRanda
14034 chr11 85347268 85347268 1 + G A rs146322392 85347256 + 85347236 85347276 41 TTGAAGAGACACTTGAGAAAACTATACATGAAGAGTAACCA TTGAAGAGACACTTGAGAAAACTATACATGAAAAGTAACCA < 41bp 1 0.387668446755223 1 0.720254898071289 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 TMEM126B ENSG00000171204 CDS Human protein_coding chr11:85347256 chr11:85347268 nonsynonymous SNV 0.690 1 hm6A_associated_SNPs_13474 0 0 1 2 85347257 85347280 mRNA hsa-miR-9 TMEM126B miRanda miRanda
14034 chr11 86017386 86017386 1 + A G rs145991257 86017383 + 86017363 86017403 41 TTGTGGTTTTTATGCTGGGAACAATCCCATTTCCTGAGGGA TTGTGGTTTTTATGCTGGGAACAGTCCCATTTCCTGAGGGA < 41bp 1 0.54510530364446 1 0.502367556095123 experiment 0.909789392711081 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 24 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017383 chr11:86017386 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_13477 0 0 1 1 86017368 86017389 mRNA hsa-miR-219-5p C11orf73 miRanda miRanda
14034 chr11 86048521 86048521 1 + G A rs140987469 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAACAGACTC < 41bp 1 0.581382588819191 1 0.106326639652252 experiment 0.837234822361618 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048521 synonymous SNV . 0 hm6A_associated_SNPs_13478 0 0 1 4 86048520 86048546 mRNA hsa-miR-15a C11orf73 miRanda miRanda
14034 chr11 86048521 86048521 1 + G A rs140987469 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAACAGACTC < 41bp 1 0.581382588819191 1 0.106326639652252 experiment 0.837234822361618 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048521 synonymous SNV . 0 hm6A_associated_SNPs_13478 0 0 1 4 86048507 86048531 mRNA hsa-miR-28-5p C11orf73 miRanda miRanda
14034 chr11 86048521 86048521 1 + G A rs140987469 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAACAGACTC < 41bp 1 0.581382588819191 1 0.106326639652252 experiment 0.837234822361618 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048521 synonymous SNV . 0 hm6A_associated_SNPs_13478 0 0 1 4 86048521 86048545 mRNA hsa-miR-103 C11orf73 miRanda miRanda
14034 chr11 86048521 86048521 1 + G A rs140987469 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAACAGACTC < 41bp 1 0.581382588819191 1 0.106326639652252 experiment 0.837234822361618 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048521 synonymous SNV . 0 hm6A_associated_SNPs_13478 0 0 1 4 86048521 86048545 mRNA hsa-miR-107 C11orf73 miRanda miRanda
14034 chr11 87033224 87033224 1 + A G rs186868127 87033219 + 87033199 87033239 41 GTTTGTTTTCATTTATATGGACATAATCCTTCATAGCTCAG GTTTGTTTTCATTTATATGGACATAGTCCTTCATAGCTCAG < 41bp 1 0.287208392814476 1 0.399904847145081 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 26 TMEM135 ENSG00000166575 UTR3 Human protein_coding chr11:87033219 chr11:87033224 . . 0 hm6A_associated_SNPs_13486 0 0 1 1 87033204 87033227 mRNA hsa-miR-190 TMEM135 miRanda miRanda
14034 chr11 87034162 87034162 1 + C T rs11235098 87034161 + 87034141 87034181 41 ATAAATTATTGTTTTCATTGACATTAAAAGACTGTGATATT ATAAATTATTGTTTTCATTGATATTAAAAGACTGTGATATT Direct Loss 1 0.133712779710658 1 0.89598023891449 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 TMEM135 ENSG00000166575 UTR3 Human protein_coding chr11:87034161 chr11:87034162 . . 0 hm6A_associated_SNPs_13487 0 0 1 5 87034157 87034178 mRNA hsa-miR-27a TMEM135 miRanda miRanda
14034 chr11 87034162 87034162 1 + C T rs11235098 87034161 + 87034141 87034181 41 ATAAATTATTGTTTTCATTGACATTAAAAGACTGTGATATT ATAAATTATTGTTTTCATTGATATTAAAAGACTGTGATATT Direct Loss 1 0.133712779710658 1 0.89598023891449 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 TMEM135 ENSG00000166575 UTR3 Human protein_coding chr11:87034161 chr11:87034162 . . 0 hm6A_associated_SNPs_13487 0 0 1 5 87034157 87034177 mRNA hsa-miR-212 TMEM135 miRanda miRanda
14034 chr11 87034162 87034162 1 + C T rs11235098 87034161 + 87034141 87034181 41 ATAAATTATTGTTTTCATTGACATTAAAAGACTGTGATATT ATAAATTATTGTTTTCATTGATATTAAAAGACTGTGATATT Direct Loss 1 0.133712779710658 1 0.89598023891449 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 TMEM135 ENSG00000166575 UTR3 Human protein_coding chr11:87034161 chr11:87034162 . . 0 hm6A_associated_SNPs_13487 0 0 1 5 87034157 87034178 mRNA hsa-miR-27b TMEM135 miRanda miRanda
14034 chr11 87034162 87034162 1 + C T rs11235098 87034161 + 87034141 87034181 41 ATAAATTATTGTTTTCATTGACATTAAAAGACTGTGATATT ATAAATTATTGTTTTCATTGATATTAAAAGACTGTGATATT Direct Loss 1 0.133712779710658 1 0.89598023891449 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 TMEM135 ENSG00000166575 UTR3 Human protein_coding chr11:87034161 chr11:87034162 . . 0 hm6A_associated_SNPs_13487 0 0 1 5 87034157 87034177 mRNA hsa-miR-128 TMEM135 miRanda miRanda
14034 chr11 87034162 87034162 1 + C T rs11235098 87034161 + 87034141 87034181 41 ATAAATTATTGTTTTCATTGACATTAAAAGACTGTGATATT ATAAATTATTGTTTTCATTGATATTAAAAGACTGTGATATT Direct Loss 1 0.133712779710658 1 0.89598023891449 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 TMEM135 ENSG00000166575 UTR3 Human protein_coding chr11:87034161 chr11:87034162 . . 0 hm6A_associated_SNPs_13487 0 0 1 5 87034156 87034177 mRNA hsa-miR-132 TMEM135 miRanda miRanda
14034 chr11 93545291 93545291 1 + C G rs7935747 93545272 + 93545252 93545292 41 AGAAGTTTCCAGAAACTTTGACTTGAAATGTTTGCAGATCA AGAAGTTTCCAGAAACTTTGACTTGAAATGTTTGCAGATGA < 41bp 1 0.592558939540804 1 0.988376617431641 experiment 0.814882120918392 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 MED17 ENSG00000042429 UTR3 Human protein_coding chr11:93545272 chr11:93545291 . . 0 hm6A_associated_SNPs_13495 0 0 1 1 93545277 93545305 mRNA hsa-miR-218 MED17 miRanda miRanda
14034 chr11 93914990 93914990 1 + T G rs1071 93914988 + 93914968 93915008 41 GCGTGCTTGGAGCCAGAAAAACTTAGCGGTTTATTTTGTTT GCGTGCTTGGAGCCAGAAAAACGTAGCGGTTTATTTTGTTT Direct Loss 1 0.442310255203256 1 0.608754813671112 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914988 chr11:93914990 . . 0 hm6A_associated_SNPs_13500 0 0 0 5 93914990 93915011 mRNA hsa-miR-30a PANX1 miRanda miRanda
14034 chr11 93914990 93914990 1 + T G rs1071 93914988 + 93914968 93915008 41 GCGTGCTTGGAGCCAGAAAAACTTAGCGGTTTATTTTGTTT GCGTGCTTGGAGCCAGAAAAACGTAGCGGTTTATTTTGTTT Direct Loss 1 0.442310255203256 1 0.608754813671112 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914988 chr11:93914990 . . 0 hm6A_associated_SNPs_13500 0 0 0 5 93914988 93915011 mRNA hsa-miR-30c PANX1 miRanda miRanda
14034 chr11 93914990 93914990 1 + T G rs1071 93914988 + 93914968 93915008 41 GCGTGCTTGGAGCCAGAAAAACTTAGCGGTTTATTTTGTTT GCGTGCTTGGAGCCAGAAAAACGTAGCGGTTTATTTTGTTT Direct Loss 1 0.442310255203256 1 0.608754813671112 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914988 chr11:93914990 . . 0 hm6A_associated_SNPs_13500 0 0 0 5 93914990 93915011 mRNA hsa-miR-30d PANX1 miRanda miRanda
14034 chr11 93914990 93914990 1 + T G rs1071 93914988 + 93914968 93915008 41 GCGTGCTTGGAGCCAGAAAAACTTAGCGGTTTATTTTGTTT GCGTGCTTGGAGCCAGAAAAACGTAGCGGTTTATTTTGTTT Direct Loss 1 0.442310255203256 1 0.608754813671112 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914988 chr11:93914990 . . 0 hm6A_associated_SNPs_13500 0 0 0 5 93914990 93915011 mRNA hsa-miR-30b PANX1 miRanda miRanda
14034 chr11 93914990 93914990 1 + T G rs1071 93914988 + 93914968 93915008 41 GCGTGCTTGGAGCCAGAAAAACTTAGCGGTTTATTTTGTTT GCGTGCTTGGAGCCAGAAAAACGTAGCGGTTTATTTTGTTT Direct Loss 1 0.442310255203256 1 0.608754813671112 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 PANX1 ENSG00000110218 UTR3 Human protein_coding chr11:93914988 chr11:93914990 . . 0 hm6A_associated_SNPs_13500 0 0 0 5 93914990 93915011 mRNA hsa-miR-30e PANX1 miRanda miRanda
14034 chr11 94802587 94802587 1 + A G rs75933525 94802594 + 94802574 94802614 41 TACTAGCAAAGGGAAAAATAACAATTTGGTGTCAATGATCT TACTAGCAAAGGGGAAAATAACAATTTGGTGTCAATGATCT < 41bp 1 0.240412860676296 1 0.0428744554519653 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94802594 chr11:94802587 . . 0 hm6A_associated_SNPs_13521 0 0 1 2 94802567 94802588 mRNA hsa-miR-204 SFRS2B miRanda miRanda
14034 chr11 94802587 94802587 1 + A G rs75933525 94802594 + 94802574 94802614 41 TACTAGCAAAGGGAAAAATAACAATTTGGTGTCAATGATCT TACTAGCAAAGGGGAAAATAACAATTTGGTGTCAATGATCT < 41bp 1 0.240412860676296 1 0.0428744554519653 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94802594 chr11:94802587 . . 0 hm6A_associated_SNPs_13521 0 0 1 2 94802567 94802588 mRNA hsa-miR-211 SFRS2B miRanda miRanda
14034 chr11 94803043 94803043 1 + A G rs680673 94803059 + 94803039 94803079 41 AGGTATATTTATTAAATGGGACCGAGTGGGACGGGGACGGG AGGTGTATTTATTAAATGGGACCGAGTGGGACGGGGACGGG < 41bp 1 0.125881627208328 1 0.0684277713298798 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94803059 chr11:94803043 . . 0 hm6A_associated_SNPs_13524 0 0 0 1 94803024 94803045 mRNA hsa-miR-875-5p SFRS2B miRanda miRanda
14034 chr11 94865068 94865068 1 + G T rs533669 94865071 + 94865051 94865091 41 GTTTTGAAACCTAAAAAGGGACAATAAAGCAAAAAGTATCA GTTTTGAAACCTAAAAATGGACAATAAAGCAAAAAGTATCA < 41bp 1 0.419141083322041 1 0.598699808120728 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865071 chr11:94865068 . . 0 hm6A_associated_SNPs_13541 0 0 1 3 94865066 94865086 mRNA hsa-miR-129-5p ENDOD1 miRanda miRanda
14034 chr11 94865068 94865068 1 + G T rs533669 94865071 + 94865051 94865091 41 GTTTTGAAACCTAAAAAGGGACAATAAAGCAAAAAGTATCA GTTTTGAAACCTAAAAATGGACAATAAAGCAAAAAGTATCA < 41bp 1 0.419141083322041 1 0.598699808120728 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865071 chr11:94865068 . . 0 hm6A_associated_SNPs_13541 0 0 1 3 94865051 94865072 mRNA hsa-miR-204 ENDOD1 miRanda miRanda
14034 chr11 94865068 94865068 1 + G T rs533669 94865071 + 94865051 94865091 41 GTTTTGAAACCTAAAAAGGGACAATAAAGCAAAAAGTATCA GTTTTGAAACCTAAAAATGGACAATAAAGCAAAAAGTATCA < 41bp 1 0.419141083322041 1 0.598699808120728 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865071 chr11:94865068 . . 0 hm6A_associated_SNPs_13541 0 0 1 3 94865052 94865072 mRNA hsa-miR-211 ENDOD1 miRanda miRanda
14034 chr11 94865614 94865614 1 + G A rs553035554 94865617 + 94865597 94865637 41 GAACACATGGTACAATCGTAACACATGAAGGACAAGTAAGT GAACACATGGTACAATCATAACACATGAAGGACAAGTAAGT < 41bp 1 0.154602899081633 1 0.858683466911316 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865617 chr11:94865614 . . 0 hm6A_associated_SNPs_13543 0 0 0 1 94865607 94865628 mRNA hsa-miR-205 ENDOD1 miRanda miRanda
14034 chr11 94865614 94865614 1 + G A rs553035554 94865628 + 94865608 94865648 41 ACAATCGTAACACATGAAGGACAAGTAAGTGCTGCAGTAAA ACAATCATAACACATGAAGGACAAGTAAGTGCTGCAGTAAA < 41bp 1 0.441865390539274 1 0.826625823974609 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865628 chr11:94865614 . . 0 hm6A_associated_SNPs_13544 0 0 0 1 94865607 94865628 mRNA hsa-miR-205 ENDOD1 miRanda miRanda
14034 chr11 102248950 102248950 1 + G A rs35806428 102248969 + 102248949 102248989 41 GGTCTTTAAAATATTGTTGAACACTTGAAGCCATCTAAAGT GATCTTTAAAATATTGTTGAACACTTGAAGCCATCTAAAGT < 41bp 1 0.583963292292471 1 0.861831307411194 experiment 0.832073415415058 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 BIRC2 ENSG00000110330 UTR3 Human protein_coding chr11:102248969 chr11:102248950 . . 0 hm6A_associated_SNPs_13557 0 0 0 1 102248946 102248969 mRNA hsa-miR-421 BIRC2 miRanda miRanda
14034 chr11 105967677 105967677 1 + C A rs369569371 105967665 + 105967645 105967685 41 AGTAACAAAGGGAAATGAAAACTGTTTGTGATCTTCCGTAT AGTAACAAAGGGAAATGAAAACTGTTTGTGATATTCCGTAT < 41bp 1 0.798168192507338 1 0.953497886657715 experiment 0.403663614985324 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 AASDHPPT ENSG00000254433 ncRNA_intronic Human antisense chr11:105967665 chr11:105967677 . . 0 hm6A_associated_SNPs_13567 0 0 1 1 105967659 105967680 mRNA hsa-miR-224 AASDHPPT miRanda miRanda
14034 chr11 107976292 107976292 1 + G A rs551375249 107976278 + 107976258 107976298 41 TTTATATATTTTAAAAATAAACATTTTTTAAATCGTCAGAA TTTATATATTTTAAAAATAAACATTTTTTAAATCATCAGAA < 41bp 1 0.189023761212253 1 0.011175811290741 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 CUL5 ENSG00000255467 ncRNA_intronic Human antisense chr11:107976278 chr11:107976292 . . 0 hm6A_associated_SNPs_13570 0 0 1 1 107976285 107976307 mRNA hsa-miR-455-5p CUL5 miRanda miRanda
14034 chr11 108139183 108139183 1 + A G rs3218687 108139194 + 108139174 108139214 41 GCAAGATCTACTTTTCTTAGACATGCTCAAGTTCTTGTGTT GCAAGATCTGCTTTTCTTAGACATGCTCAAGTTCTTGTGTT < 41bp 1 0.71250438168848 1 0.0698504447937012 experiment 0.574991236623039 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 ATM ENSG00000149311 CDS Human protein_coding chr11:108139194 chr11:108139183 synonymous SNV . 0 hm6A_associated_SNPs_13574 2 0 1 1 108139166 108139186 mRNA hsa-miR-411 ATM miRanda miRanda
14034 chr11 108166207 108166207 1 + C T rs534537992 108166190 + 108166170 108166210 41 CAGCCTTCTGAATAGCTGGAACAACAGGCACACACCACTAC CAGCCTTCTGAATAGCTGGAACAACAGGCACACACCATTAC < 41bp 1 0.0230448627883215 1 0.000421404838562012 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 ATM ENSG00000149311 UTR3 Human protein_coding chr11:108166190 chr11:108166207 . . 0 hm6A_associated_SNPs_13575 0 0 1 2 108166201 108166224 mRNA hsa-miR-93 ATM miRanda miRanda
14034 chr11 108166207 108166207 1 + C T rs534537992 108166190 + 108166170 108166210 41 CAGCCTTCTGAATAGCTGGAACAACAGGCACACACCACTAC CAGCCTTCTGAATAGCTGGAACAACAGGCACACACCATTAC < 41bp 1 0.0230448627883215 1 0.000421404838562012 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 ATM ENSG00000149311 UTR3 Human protein_coding chr11:108166190 chr11:108166207 . . 0 hm6A_associated_SNPs_13575 0 0 1 2 108166195 108166218 mRNA hsa-miR-138 ATM miRanda miRanda
14034 chr11 111431024 111431024 1 + C T rs77694317 111431023 + 111431003 111431043 41 TCCCGATGACATGTCTTGTGACTATGACAACATGGCTGTGA TCCCGATGACATGTCTTGTGATTATGACAACATGGCTGTGA Direct Loss 1 0.787022447342152 1 0.820137143135071 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 LAYN ENSG00000204381 CDS Human protein_coding chr11:111431023 chr11:111431024 synonymous SNV . 0 hm6A_associated_SNPs_13588 0 0 1 1 111431009 111431032 mRNA hsa-miR-153 LAYN miRanda miRanda
14034 chr11 111595483 111595483 1 + G A rs4936666 111595480 + 111595460 111595500 41 AGCTGGTACTGACCCCAGAAACCGCCTTCATCTCCATTCGG AGCTGGTACTGACCCCAGAAACCACCTTCATCTCCATTCGG < 41bp 1 0.212156692512321 1 0.908905267715454 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 SIK2 ENSG00000170145 UTR3 Human protein_coding chr11:111595480 chr11:111595483 . . 0 hm6A_associated_SNPs_13592 0 0 0 2 111595474 111595494 mRNA hsa-miR-143 SIK2 miRanda miRanda
14034 chr11 111595483 111595483 1 + G A rs4936666 111595480 + 111595460 111595500 41 AGCTGGTACTGACCCCAGAAACCGCCTTCATCTCCATTCGG AGCTGGTACTGACCCCAGAAACCACCTTCATCTCCATTCGG < 41bp 1 0.212156692512321 1 0.908905267715454 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 SIK2 ENSG00000170145 UTR3 Human protein_coding chr11:111595480 chr11:111595483 . . 0 hm6A_associated_SNPs_13592 0 0 0 2 111595474 111595495 mRNA hsa-miR-185 SIK2 miRanda miRanda
14034 chr11 111954108 111954108 1 + C T rs184466504 111954097 + 111954077 111954117 41 ATGCCATGTAGGATGGTATGACAAGGCAACACTGTATTGCT ATGCCATGTAGGATGGTATGACAAGGCAACATTGTATTGCT < 41bp 1 0.736095189705595 1 0.349986284971237 experiment 0.527809620588809 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 C11orf57 ENSG00000150776 UTR3 Human protein_coding chr11:111954097 chr11:111954108 . . 0 hm6A_associated_SNPs_13608 0 0 1 1 111954100 111954123 mRNA hsa-miR-335 C11orf57 miRanda miRanda
14034 chr11 111954266 111954266 1 + T C rs144786392 111954286 + 111954266 111954306 41 TAGACAACTTATTAGAAGGGACTAGAGTTTTTGCAAATTTC CAGACAACTTATTAGAAGGGACTAGAGTTTTTGCAAATTTC < 41bp 1 0.768177502812342 1 0.57351166009903 experiment 0.463644994375316 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 C11orf57 ENSG00000150776 UTR3 Human protein_coding chr11:111954286 chr11:111954266 . . 0 hm6A_associated_SNPs_13609 0 0 1 1 111954255 111954276 mRNA hsa-miR-382 C11orf57 miRanda miRanda
14034 chr11 117038723 117038723 1 + C G rs578119156 117038712 + 117038692 117038732 41 ATTATCACTGTTTTCTTGGGACAACATCAAGCCTAAATACT ATTATCACTGTTTTCTTGGGACAACATCAAGGCTAAATACT < 41bp 1 0.730167209618851 1 0.857161104679108 experiment 0.539665580762299 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117038712 chr11:117038723 . . 0 hm6A_associated_SNPs_13616 0 0 1 3 117038712 117038735 mRNA hsa-miR-144 PAFAH1B2 miRanda miRanda
14034 chr11 117038723 117038723 1 + C G rs578119156 117038712 + 117038692 117038732 41 ATTATCACTGTTTTCTTGGGACAACATCAAGCCTAAATACT ATTATCACTGTTTTCTTGGGACAACATCAAGGCTAAATACT < 41bp 1 0.730167209618851 1 0.857161104679108 experiment 0.539665580762299 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117038712 chr11:117038723 . . 0 hm6A_associated_SNPs_13616 0 0 1 3 117038714 117038739 mRNA hsa-miR-375 PAFAH1B2 miRanda miRanda
14034 chr11 117038723 117038723 1 + C G rs578119156 117038712 + 117038692 117038732 41 ATTATCACTGTTTTCTTGGGACAACATCAAGCCTAAATACT ATTATCACTGTTTTCTTGGGACAACATCAAGGCTAAATACT < 41bp 1 0.730167209618851 1 0.857161104679108 experiment 0.539665580762299 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117038712 chr11:117038723 . . 0 hm6A_associated_SNPs_13616 0 0 1 3 117038713 117038734 mRNA hsa-miR-496 PAFAH1B2 miRanda miRanda
14034 chr11 117038723 117038723 1 + C G rs578119156 117038735 + 117038715 117038755 41 ACATCAAGCCTAAATACTGAACAATATGAAGATTCTTTTCT ACATCAAGGCTAAATACTGAACAATATGAAGATTCTTTTCT < 41bp 1 0.708224794534786 1 0.727628171443939 experiment 0.583550410930428 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117038735 chr11:117038723 . . 0 hm6A_associated_SNPs_13617 0 0 1 3 117038712 117038735 mRNA hsa-miR-144 PAFAH1B2 miRanda miRanda
14034 chr11 117038723 117038723 1 + C G rs578119156 117038735 + 117038715 117038755 41 ACATCAAGCCTAAATACTGAACAATATGAAGATTCTTTTCT ACATCAAGGCTAAATACTGAACAATATGAAGATTCTTTTCT < 41bp 1 0.708224794534786 1 0.727628171443939 experiment 0.583550410930428 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117038735 chr11:117038723 . . 0 hm6A_associated_SNPs_13617 0 0 1 3 117038714 117038739 mRNA hsa-miR-375 PAFAH1B2 miRanda miRanda
14034 chr11 117038723 117038723 1 + C G rs578119156 117038735 + 117038715 117038755 41 ACATCAAGCCTAAATACTGAACAATATGAAGATTCTTTTCT ACATCAAGGCTAAATACTGAACAATATGAAGATTCTTTTCT < 41bp 1 0.708224794534786 1 0.727628171443939 experiment 0.583550410930428 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117038735 chr11:117038723 . . 0 hm6A_associated_SNPs_13617 0 0 1 3 117038713 117038734 mRNA hsa-miR-496 PAFAH1B2 miRanda miRanda
14034 chr11 117038741 117038741 1 + T A rs77171490 117038735 + 117038715 117038755 41 ACATCAAGCCTAAATACTGAACAATATGAAGATTCTTTTCT ACATCAAGCCTAAATACTGAACAATAAGAAGATTCTTTTCT < 41bp 1 0.728502874644333 1 0.767349898815155 experiment 0.542994250711333 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117038735 chr11:117038741 . . 0 hm6A_associated_SNPs_13618 0 0 1 1 117038732 117038753 mRNA hsa-miR-186 PAFAH1B2 miRanda miRanda
14034 chr11 117041222 117041222 1 + C T rs114732975 117041237 + 117041217 117041257 41 ACCACCGTGAGGCTACTTGAACTGTCAGGGGCATCTGCCTA ACCACTGTGAGGCTACTTGAACTGTCAGGGGCATCTGCCTA < 41bp 1 0.16097693278055 1 0.687185525894165 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117041237 chr11:117041222 . . 0 hm6A_associated_SNPs_13619 0 0 1 1 117041222 117041245 mRNA hsa-miR-139-5p PAFAH1B2 miRanda miRanda
14034 chr11 117283091 117283091 1 + C T rs2279013 117283111 + 117283091 117283131 41 CGTACGAGCTCTTGTCATTGACATGGCAAGCTGATGGCGTG TGTACGAGCTCTTGTCATTGACATGGCAAGCTGATGGCGTG < 41bp 1 0.577103170546045 1 0.931591987609863 experiment 0.84579365890791 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 CEP164 ENSG00000110274 UTR3 Human protein_coding chr11:117283111 chr11:117283091 . . 0 hm6A_associated_SNPs_13626 0 0 1 1 117283083 117283105 mRNA hsa-miR-335 CEP164 miRanda miRanda
14034 chr11 117283092 117283092 1 + G A rs543119751 117283088 + 117283068 117283108 41 TCTCAGGCTAAAATGTGTGGACTCGTACGAGCTCTTGTCAT TCTCAGGCTAAAATGTGTGGACTCATACGAGCTCTTGTCAT < 41bp 1 0.79196038649952 1 0.990178346633911 experiment 0.416079227000959 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 25 CEP164 ENSG00000110274 UTR3 Human protein_coding chr11:117283088 chr11:117283092 . . 0 hm6A_associated_SNPs_13627 0 0 0 1 117283083 117283105 mRNA hsa-miR-335 CEP164 miRanda miRanda
14034 chr11 117283092 117283092 1 + G A rs543119751 117283111 + 117283091 117283131 41 CGTACGAGCTCTTGTCATTGACATGGCAAGCTGATGGCGTG CATACGAGCTCTTGTCATTGACATGGCAAGCTGATGGCGTG < 41bp 1 0.567868211669087 1 0.93036413192749 experiment 0.864263576661825 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 CEP164 ENSG00000110274 UTR3 Human protein_coding chr11:117283111 chr11:117283092 . . 0 hm6A_associated_SNPs_13628 0 0 0 1 117283083 117283105 mRNA hsa-miR-335 CEP164 miRanda miRanda
14034 chr11 117283604 117283604 1 + G A rs11602119 117283623 + 117283603 117283643 41 TGGAGTCTCAGGTCTCAAAAACAACTTCTCCAGGAGGCCAA TAGAGTCTCAGGTCTCAAAAACAACTTCTCCAGGAGGCCAA < 41bp 1 0.0769392619220408 1 0.821895360946655 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 CEP164 ENSG00000110274 UTR3 Human protein_coding chr11:117283623 chr11:117283604 . . 0 hm6A_associated_SNPs_13630 0 0 1 1 117283592 117283614 mRNA hsa-miR-422a CEP164 miRanda miRanda
14034 chr11 117283626 117283626 1 + A G rs572884 117283623 + 117283603 117283643 41 TGGAGTCTCAGGTCTCAAAAACAACTTCTCCAGGAGGCCAA TGGAGTCTCAGGTCTCAAAAACAGCTTCTCCAGGAGGCCAA < 41bp 1 0.0636348920844136 1 0.795192122459412 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 CEP164 ENSG00000110274 UTR3 Human protein_coding chr11:117283623 chr11:117283626 . . 0 hm6A_associated_SNPs_13631 0 0 1 1 117283609 117283630 mRNA hsa-miR-382 CEP164 miRanda miRanda
14034 chr11 118471577 118471577 1 + G A rs79329602 118471571 + 118471551 118471591 41 ACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCATGT ACGATTCTCTGCGCGCAAGGACCCTCAACTCACCCCCATGT < 41bp 1 0.677210285426571 1 0.924306869506836 experiment 0.645579429146858 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 ARCN1 ENSG00000095139 UTR3 Human protein_coding chr11:118471571 chr11:118471577 . . 0 hm6A_associated_SNPs_13646 0 0 1 1 118471574 118471595 mRNA hsa-miR-494 ARCN1 miRanda miRanda
14034 chr11 118952371 118952371 1 + A G rs4614 118952368 + 118952348 118952388 41 GATGTGGGCAACAGTGGAGGACCAAGAGAACAGACACAATG GATGTGGGCAACAGTGGAGGACCGAGAGAACAGACACAATG < 41bp 1 0.706606368416125 1 0.927344083786011 experiment 0.58678726316775 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 VPS11 ENSG00000160695 UTR3 Human protein_coding chr11:118952368 chr11:118952371 . 0.000 0 hm6A_associated_SNPs_13655 0 0 1 3 118952352 118952373 mRNA hsa-miR-133a VPS11 miRanda miRanda
14034 chr11 118952371 118952371 1 + A G rs4614 118952368 + 118952348 118952388 41 GATGTGGGCAACAGTGGAGGACCAAGAGAACAGACACAATG GATGTGGGCAACAGTGGAGGACCGAGAGAACAGACACAATG < 41bp 1 0.706606368416125 1 0.927344083786011 experiment 0.58678726316775 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 VPS11 ENSG00000160695 UTR3 Human protein_coding chr11:118952368 chr11:118952371 . 0.000 0 hm6A_associated_SNPs_13655 0 0 1 3 118952352 118952373 mRNA hsa-miR-133b VPS11 miRanda miRanda
14034 chr11 118952371 118952371 1 + A G rs4614 118952368 + 118952348 118952388 41 GATGTGGGCAACAGTGGAGGACCAAGAGAACAGACACAATG GATGTGGGCAACAGTGGAGGACCGAGAGAACAGACACAATG < 41bp 1 0.706606368416125 1 0.927344083786011 experiment 0.58678726316775 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 VPS11 ENSG00000160695 UTR3 Human protein_coding chr11:118952368 chr11:118952371 . 0.000 0 hm6A_associated_SNPs_13655 0 0 1 3 118952369 118952387 mRNA hsa-miR-599 VPS11 miRanda miRanda
14034 chr11 118952487 118952487 1 + C G rs143645369 118952477 + 118952457 118952497 41 AGCCCTCAGAACTAAAGCGGACTTTCTTTCCCTGCCTTCTT AGCCCTCAGAACTAAAGCGGACTTTCTTTCGCTGCCTTCTT < 41bp 1 0.741163473543222 1 0.953223705291748 experiment 0.517673052913556 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 31 VPS11 ENSG00000160695 UTR3 Human protein_coding chr11:118952477 chr11:118952487 . . 0 hm6A_associated_SNPs_13656 0 0 1 2 118952476 118952495 mRNA hsa-miR-124 VPS11 miRanda miRanda
14034 chr11 118952487 118952487 1 + C G rs143645369 118952477 + 118952457 118952497 41 AGCCCTCAGAACTAAAGCGGACTTTCTTTCCCTGCCTTCTT AGCCCTCAGAACTAAAGCGGACTTTCTTTCGCTGCCTTCTT < 41bp 1 0.741163473543222 1 0.953223705291748 experiment 0.517673052913556 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 31 VPS11 ENSG00000160695 UTR3 Human protein_coding chr11:118952477 chr11:118952487 . . 0 hm6A_associated_SNPs_13656 0 0 1 2 118952475 118952495 mRNA hsa-miR-506 VPS11 miRanda miRanda
14034 chr11 119207370 119207370 1 + G A rs61900003 119207384 + 119207364 119207404 41 CACTATGCAAGGGCCCTGAGACTATTTGCTGTGGGCTCTCC CACTATACAAGGGCCCTGAGACTATTTGCTGTGGGCTCTCC < 41bp 1 0.711886746486105 1 0.913586735725403 experiment 0.57622650702779 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 RNF26 ENSG00000245385 ncRNA_intronic Human antisense chr11:119207384 chr11:119207370 . . 0 hm6A_associated_SNPs_13670 0 0 1 1 119207352 119207373 mRNA hsa-miR-153 RNF26 miRanda miRanda
14034 chr11 120100597 120100597 1 + G A rs9655 120100577 + 120100557 120100597 41 GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAG GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAA < 41bp 1 0.531950883777208 1 0.534415483474731 experiment 0.936098232445584 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 OAF ENSG00000184232 UTR3 Human protein_coding chr11:120100577 chr11:120100597 . . 0 hm6A_associated_SNPs_13671 0 0 1 6 120100583 120100604 mRNA hsa-miR-25 OAF miRanda miRanda
14034 chr11 120100597 120100597 1 + G A rs9655 120100577 + 120100557 120100597 41 GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAG GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAA < 41bp 1 0.531950883777208 1 0.534415483474731 experiment 0.936098232445584 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 OAF ENSG00000184232 UTR3 Human protein_coding chr11:120100577 chr11:120100597 . . 0 hm6A_associated_SNPs_13671 0 0 1 6 120100585 120100604 mRNA hsa-miR-32 OAF miRanda miRanda
14034 chr11 120100597 120100597 1 + G A rs9655 120100577 + 120100557 120100597 41 GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAG GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAA < 41bp 1 0.531950883777208 1 0.534415483474731 experiment 0.936098232445584 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 OAF ENSG00000184232 UTR3 Human protein_coding chr11:120100577 chr11:120100597 . . 0 hm6A_associated_SNPs_13671 0 0 1 6 120100583 120100604 mRNA hsa-miR-92a OAF miRanda miRanda
14034 chr11 120100597 120100597 1 + G A rs9655 120100577 + 120100557 120100597 41 GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAG GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAA < 41bp 1 0.531950883777208 1 0.534415483474731 experiment 0.936098232445584 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 OAF ENSG00000184232 UTR3 Human protein_coding chr11:120100577 chr11:120100597 . . 0 hm6A_associated_SNPs_13671 0 0 1 6 120100585 120100604 mRNA hsa-miR-363 OAF miRanda miRanda
14034 chr11 120100597 120100597 1 + G A rs9655 120100577 + 120100557 120100597 41 GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAG GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAA < 41bp 1 0.531950883777208 1 0.534415483474731 experiment 0.936098232445584 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 OAF ENSG00000184232 UTR3 Human protein_coding chr11:120100577 chr11:120100597 . . 0 hm6A_associated_SNPs_13671 0 0 1 6 120100583 120100604 mRNA hsa-miR-367 OAF miRanda miRanda
14034 chr11 120100597 120100597 1 + G A rs9655 120100577 + 120100557 120100597 41 GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAG GAGCATGAAGTACGAGGAAAACTTGAATTCCAGATTTTTAA < 41bp 1 0.531950883777208 1 0.534415483474731 experiment 0.936098232445584 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 OAF ENSG00000184232 UTR3 Human protein_coding chr11:120100577 chr11:120100597 . . 0 hm6A_associated_SNPs_13671 0 0 1 6 120100583 120100604 mRNA hsa-miR-92b OAF miRanda miRanda
14034 chr11 122742268 122742268 1 + C A rs116506147 122742278 + 122742258 122742298 41 GCTAGGGCAGCAACATGAGGACCAAACCATGCACATAAAGC GCTAGGGCAGAAACATGAGGACCAAACCATGCACATAAAGC < 41bp 1 0.102399668844204 1 0.860536813735962 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 CRTAM ENSG00000109943 UTR3 Human protein_coding chr11:122742278 chr11:122742268 . . 0 hm6A_associated_SNPs_13696 0 0 0 2 122742262 122742283 mRNA hsa-miR-133a CRTAM miRanda miRanda
14034 chr11 122742268 122742268 1 + C A rs116506147 122742278 + 122742258 122742298 41 GCTAGGGCAGCAACATGAGGACCAAACCATGCACATAAAGC GCTAGGGCAGAAACATGAGGACCAAACCATGCACATAAAGC < 41bp 1 0.102399668844204 1 0.860536813735962 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 CRTAM ENSG00000109943 UTR3 Human protein_coding chr11:122742278 chr11:122742268 . . 0 hm6A_associated_SNPs_13696 0 0 0 2 122742262 122742283 mRNA hsa-miR-133b CRTAM miRanda miRanda
14034 chr11 123995249 123995249 1 + C T rs11825291 123995252 + 123995232 123995272 41 TTCTTTCTAAACTACAACGAACACAAGAATTGAATAGTAAG TTCTTTCTAAACTACAATGAACACAAGAATTGAATAGTAAG < 41bp 1 0.225896319367914 1 0.639472961425781 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 VWA5A ENSG00000110002 UTR3 Human protein_coding chr11:123995252 chr11:123995249 . . 0 hm6A_associated_SNPs_13702 0 0 0 2 123995235 123995256 mRNA hsa-miR-375 VWA5A miRanda miRanda
14034 chr11 123995249 123995249 1 + C T rs11825291 123995252 + 123995232 123995272 41 TTCTTTCTAAACTACAACGAACACAAGAATTGAATAGTAAG TTCTTTCTAAACTACAATGAACACAAGAATTGAATAGTAAG < 41bp 1 0.225896319367914 1 0.639472961425781 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 VWA5A ENSG00000110002 UTR3 Human protein_coding chr11:123995252 chr11:123995249 . . 0 hm6A_associated_SNPs_13702 0 0 0 2 123995246 123995270 mRNA hsa-miR-181d VWA5A miRanda miRanda
14034 chr11 125301750 125301750 1 + C T rs147552831 125301761 + 125301741 125301781 41 GAAGTTTCTCAGCTCCTTTGACAGACATTCAAGGGCAGGAG GAAGTTTCTTAGCTCCTTTGACAGACATTCAAGGGCAGGAG < 41bp 1 0.11750052303141 1 0.12424710392952 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PKNOX2 ENSG00000165495 UTR3 Human protein_coding chr11:125301761 chr11:125301750 . . 0 hm6A_associated_SNPs_13707 0 0 0 2 125301737 125301758 mRNA hsa-miR-28-5p PKNOX2 miRanda miRanda
14034 chr11 125301750 125301750 1 + C T rs147552831 125301761 + 125301741 125301781 41 GAAGTTTCTCAGCTCCTTTGACAGACATTCAAGGGCAGGAG GAAGTTTCTTAGCTCCTTTGACAGACATTCAAGGGCAGGAG < 41bp 1 0.11750052303141 1 0.12424710392952 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PKNOX2 ENSG00000165495 UTR3 Human protein_coding chr11:125301761 chr11:125301750 . . 0 hm6A_associated_SNPs_13707 0 0 0 2 125301737 125301758 mRNA hsa-miR-708 PKNOX2 miRanda miRanda
14034 chr11 125453996 125453996 1 + T C rs139180334 125454002 + 125453982 125454022 41 TTTTGTTGTTTTTCTGTGAAACACATACATTGGATATGGGA TTTTGTTGTTTTTCCGTGAAACACATACATTGGATATGGGA < 41bp 1 0.562216388611695 1 0.475364744663239 experiment 0.87556722277661 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 15 STT3A-AS1 ENSG00000254671 ncRNA_intronic Human antisense chr11:125454002 chr11:125453996 . . 0 hm6A_associated_SNPs_13710 0 0 1 3 125453981 125454001 mRNA hsa-miR-27a EI24 miRanda miRanda
14034 chr11 125453996 125453996 1 + T C rs139180334 125454002 + 125453982 125454022 41 TTTTGTTGTTTTTCTGTGAAACACATACATTGGATATGGGA TTTTGTTGTTTTTCCGTGAAACACATACATTGGATATGGGA < 41bp 1 0.562216388611695 1 0.475364744663239 experiment 0.87556722277661 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 15 STT3A-AS1 ENSG00000254671 ncRNA_intronic Human antisense chr11:125454002 chr11:125453996 . . 0 hm6A_associated_SNPs_13710 0 0 1 3 125453981 125454001 mRNA hsa-miR-27b EI24 miRanda miRanda
14034 chr11 125453996 125453996 1 + T C rs139180334 125454002 + 125453982 125454022 41 TTTTGTTGTTTTTCTGTGAAACACATACATTGGATATGGGA TTTTGTTGTTTTTCCGTGAAACACATACATTGGATATGGGA < 41bp 1 0.562216388611695 1 0.475364744663239 experiment 0.87556722277661 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 15 STT3A-AS1 ENSG00000254671 ncRNA_intronic Human antisense chr11:125454002 chr11:125453996 . . 0 hm6A_associated_SNPs_13710 0 0 1 3 125453987 125454010 mRNA hsa-miR-142-3p EI24 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526227 125526246 mRNA hsa-let-7a CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526227 125526246 mRNA hsa-let-7b CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526227 125526246 mRNA hsa-let-7c CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526225 125526246 mRNA hsa-let-7d CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526227 125526246 mRNA hsa-let-7e CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526227 125526246 mRNA hsa-let-7f CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526225 125526246 mRNA hsa-miR-98 CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526227 125526246 mRNA hsa-let-7g CHEK1 miRanda miRanda
14034 chr11 125526232 125526232 1 + T C rs146445217 125526226 + 125526206 125526246 41 AGTGCACTCCAGCTTGGATGACAGAGTAAGACCCTACCTCT AGTGCACTCCAGCTTGGATGACAGAGCAAGACCCTACCTCT < 41bp 1 0.0752807974143408 1 0.0258411765098572 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 CHEK1 ENSG00000149554 UTR3 Human protein_coding chr11:125526226 chr11:125526232 . . 0 hm6A_associated_SNPs_13713 0 0 1 9 125526225 125526246 mRNA hsa-let-7i CHEK1 miRanda miRanda
14034 chr11 126142952 126142952 1 + C T rs75183025 126142967 + 126142947 126142987 41 TTCAGCCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA TTCAGTCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA < 41bp 1 0.46247204300715 1 0.0215111672878265 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126142967 chr11:126142952 nonsynonymous SNV 0.320 0 hm6A_associated_SNPs_13718 0 0 0 5 126142939 126142960 mRNA hsa-miR-320a FOXRED1 miRanda miRanda
14034 chr11 126142952 126142952 1 + C T rs75183025 126142967 + 126142947 126142987 41 TTCAGCCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA TTCAGTCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA < 41bp 1 0.46247204300715 1 0.0215111672878265 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126142967 chr11:126142952 nonsynonymous SNV 0.320 0 hm6A_associated_SNPs_13718 0 0 0 5 126142947 126142968 mRNA hsa-miR-384 FOXRED1 miRanda miRanda
14034 chr11 126142952 126142952 1 + C T rs75183025 126142967 + 126142947 126142987 41 TTCAGCCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA TTCAGTCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA < 41bp 1 0.46247204300715 1 0.0215111672878265 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126142967 chr11:126142952 nonsynonymous SNV 0.320 0 hm6A_associated_SNPs_13718 0 0 0 5 126142939 126142960 mRNA hsa-miR-320b FOXRED1 miRanda miRanda
14034 chr11 126142952 126142952 1 + C T rs75183025 126142967 + 126142947 126142987 41 TTCAGCCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA TTCAGTCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA < 41bp 1 0.46247204300715 1 0.0215111672878265 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126142967 chr11:126142952 nonsynonymous SNV 0.320 0 hm6A_associated_SNPs_13718 0 0 0 5 126142942 126142960 mRNA hsa-miR-320c FOXRED1 miRanda miRanda
14034 chr11 126142952 126142952 1 + C T rs75183025 126142967 + 126142947 126142987 41 TTCAGCCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA TTCAGTCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA < 41bp 1 0.46247204300715 1 0.0215111672878265 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126142967 chr11:126142952 nonsynonymous SNV 0.320 0 hm6A_associated_SNPs_13718 0 0 0 5 126142942 126142960 mRNA hsa-miR-320d FOXRED1 miRanda miRanda
14034 chr11 126164157 126164157 1 + C G rs117322993 126164169 + 126164149 126164189 41 CTCTGTTCCTCTTCCCAGAGACATCGATTCACTTCAAAGAG CTCTGTTCGTCTTCCCAGAGACATCGATTCACTTCAAAGAG < 41bp 1 0.448529509656353 1 0.947561144828796 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 9 TIRAP ENSG00000150455 UTR3 Human protein_coding chr11:126164169 chr11:126164157 . . 0 hm6A_associated_SNPs_13722 0 0 1 2 126164148 126164169 mRNA hsa-miR-330-5p TIRAP miRanda miRanda
14034 chr11 126164157 126164157 1 + C G rs117322993 126164169 + 126164149 126164189 41 CTCTGTTCCTCTTCCCAGAGACATCGATTCACTTCAAAGAG CTCTGTTCGTCTTCCCAGAGACATCGATTCACTTCAAAGAG < 41bp 1 0.448529509656353 1 0.947561144828796 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 9 TIRAP ENSG00000150455 UTR3 Human protein_coding chr11:126164169 chr11:126164157 . . 0 hm6A_associated_SNPs_13722 0 0 1 2 126164150 126164169 mRNA hsa-miR-326 TIRAP miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013457 + 130013437 130013477 41 GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTA GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTC < 41bp 1 0.642395179414173 1 0.991575300693512 experiment 0.715209641171654 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013457 chr11:130013477 . . 0 hm6A_associated_SNPs_13737 0 0 1 4 130013474 130013494 mRNA hsa-miR-101 APLP2 miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013457 + 130013437 130013477 41 GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTA GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTC < 41bp 1 0.642395179414173 1 0.991575300693512 experiment 0.715209641171654 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013457 chr11:130013477 . . 0 hm6A_associated_SNPs_13737 0 0 1 4 130013474 130013496 mRNA hsa-miR-139-5p APLP2 miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013457 + 130013437 130013477 41 GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTA GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTC < 41bp 1 0.642395179414173 1 0.991575300693512 experiment 0.715209641171654 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013457 chr11:130013477 . . 0 hm6A_associated_SNPs_13737 0 0 1 4 130013474 130013494 mRNA hsa-miR-144 APLP2 miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013457 + 130013437 130013477 41 GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTA GGGCTGCGTCTGACATCCTGACCTCCTGGACTGTAGGACTC < 41bp 1 0.642395179414173 1 0.991575300693512 experiment 0.715209641171654 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013457 chr11:130013477 . . 0 hm6A_associated_SNPs_13737 0 0 1 4 130013471 130013492 mRNA hsa-miR-411 APLP2 miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013497 + 130013477 130013517 41 ATATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA CTATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA < 41bp 1 0.621454634604485 1 0.970349013805389 experiment 0.75709073079103 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013497 chr11:130013477 . . 0 hm6A_associated_SNPs_13738 0 0 1 4 130013474 130013494 mRNA hsa-miR-101 APLP2 miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013497 + 130013477 130013517 41 ATATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA CTATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA < 41bp 1 0.621454634604485 1 0.970349013805389 experiment 0.75709073079103 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013497 chr11:130013477 . . 0 hm6A_associated_SNPs_13738 0 0 1 4 130013474 130013496 mRNA hsa-miR-139-5p APLP2 miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013497 + 130013477 130013517 41 ATATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA CTATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA < 41bp 1 0.621454634604485 1 0.970349013805389 experiment 0.75709073079103 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013497 chr11:130013477 . . 0 hm6A_associated_SNPs_13738 0 0 1 4 130013474 130013494 mRNA hsa-miR-144 APLP2 miRanda miRanda
14034 chr11 130013477 130013477 1 + A C rs182977213 130013497 + 130013477 130013517 41 ATATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA CTATAAAGTACTACTGTAGAACTGCAATTTCCATTCTTTTA < 41bp 1 0.621454634604485 1 0.970349013805389 experiment 0.75709073079103 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013497 chr11:130013477 . . 0 hm6A_associated_SNPs_13738 0 0 1 4 130013471 130013492 mRNA hsa-miR-411 APLP2 miRanda miRanda
14034 chr11 130013663 130013663 1 + A C rs537911341 130013650 + 130013630 130013670 41 CACTTCCATTGTATTGTCTGACACATGCTCTCAATATATAA CACTTCCATTGTATTGTCTGACACATGCTCTCACTATATAA < 41bp 1 0.555718466803563 1 0.744298100471497 experiment 0.888563066392875 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013650 chr11:130013663 . . 0 hm6A_associated_SNPs_13740 0 0 1 1 130013659 130013680 mRNA hsa-miR-204 APLP2 miRanda miRanda
14034 chr11 130014392 130014392 1 + C G rs569089645 130014376 + 130014356 130014396 41 TAGTCCAGGCTGTCCCTGAAACTGAGTCTGTGGACACTGTG TAGTCCAGGCTGTCCCTGAAACTGAGTCTGTGGACAGTGTG < 41bp 1 0.19547179278323 1 0.984849214553833 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130014376 chr11:130014392 . . 0 hm6A_associated_SNPs_13745 0 0 1 1 130014376 130014397 mRNA hsa-miR-128 APLP2 miRanda miRanda
14034 chr11 130014392 130014392 1 + C G rs569089645 130014408 + 130014388 130014428 41 GACACTGTGGAAAGCTTTGAACAATTGTGTTTTCGTCACAG GACAGTGTGGAAAGCTTTGAACAATTGTGTTTTCGTCACAG < 41bp 1 0.566557898761369 1 0.970878601074219 experiment 0.866884202477263 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130014408 chr11:130014392 . . 0 hm6A_associated_SNPs_13746 0 0 1 1 130014376 130014397 mRNA hsa-miR-128 APLP2 miRanda miRanda
14034 chr11 130014631 130014631 1 + A G rs141325020 130014622 + 130014602 130014642 41 ACCCACTATGCACAGATTAAACTTCACCTACAAACTCCTTA ACCCACTATGCACAGATTAAACTTCACCTGCAAACTCCTTA < 41bp 1 0.241787737440281 1 0.933447241783142 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 30 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130014622 chr11:130014631 . . 0 hm6A_associated_SNPs_13747 0 0 1 1 130014611 130014632 mRNA hsa-miR-125a-3p APLP2 miRanda miRanda
14034 chr11 130014631 130014631 1 + A G rs141325020 130014635 + 130014615 130014655 41 AGATTAAACTTCACCTACAAACTCCTTAATATGATCTGTGG AGATTAAACTTCACCTGCAAACTCCTTAATATGATCTGTGG < 41bp 1 0.327618211870908 1 0.888711452484131 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130014635 chr11:130014631 . . 0 hm6A_associated_SNPs_13748 0 0 1 1 130014611 130014632 mRNA hsa-miR-125a-3p APLP2 miRanda miRanda
14034 chr11 130080208 130080208 1 + C T rs77755300 130080207 + 130080187 130080227 41 TTTACCAGCTCCCAGGGTGGACTTCAGTGTGTGTATTTGTG TTTACCAGCTCCCAGGGTGGATTTCAGTGTGTGTATTTGTG Direct Loss 1 0.198500736510609 1 0.364843487739563 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ST14 ENSG00000149418 UTR3 Human protein_coding chr11:130080207 chr11:130080208 . . 0 hm6A_associated_SNPs_13750 0 0 0 1 130080197 130080221 mRNA hsa-miR-329 ST14 miRanda miRanda
14034 chr11 132206118 132206118 1 + C T rs370557181 132206136 + 132206116 132206156 41 TCCGCAGGGTCCTTTCTCAGACATTACTGCATGCTGTATAT TCTGCAGGGTCCTTTCTCAGACATTACTGCATGCTGTATAT < 41bp 1 0.121707772914908 1 0.302288711071014 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 3 NTM ENSG00000182667 UTR3 Human protein_coding chr11:132206136 chr11:132206118 . . 0 hm6A_associated_SNPs_13755 0 0 0 2 132206106 132206127 mRNA hsa-miR-504 NTM miRanda miRanda
14034 chr11 132206118 132206118 1 + C T rs370557181 132206136 + 132206116 132206156 41 TCCGCAGGGTCCTTTCTCAGACATTACTGCATGCTGTATAT TCTGCAGGGTCCTTTCTCAGACATTACTGCATGCTGTATAT < 41bp 1 0.121707772914908 1 0.302288711071014 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 3 NTM ENSG00000182667 UTR3 Human protein_coding chr11:132206136 chr11:132206118 . . 0 hm6A_associated_SNPs_13755 0 0 0 2 132206097 132206118 mRNA hsa-miR-539 NTM miRanda miRanda
14034 chr11 134019291 134019291 1 + C G rs147955855 134019273 + 134019253 134019293 41 AAGAATTTTCCTCAAGATGGACCCGGTAAATATAACCACAA AAGAATTTTCCTCAAGATGGACCCGGTAAATATAACCAGAA < 41bp 1 0.327053606223662 1 0.970824182033539 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 JAM3 ENSG00000166086 UTR3 Human protein_coding chr11:134019273 chr11:134019291 . . 0 hm6A_associated_SNPs_13761 0 0 1 1 134019272 134019295 mRNA hsa-miR-9 JAM3 miRanda miRanda
14034 chr11 134019291 134019291 1 + C G rs147955855 134019303 + 134019283 134019323 41 TATAACCACAAGGAAGCGAAACTGGGTGCGTTCACTGAGTT TATAACCAGAAGGAAGCGAAACTGGGTGCGTTCACTGAGTT < 41bp 1 0.197732425605122 1 0.896433591842651 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 JAM3 ENSG00000166086 UTR3 Human protein_coding chr11:134019303 chr11:134019291 . . 0 hm6A_associated_SNPs_13762 0 0 1 1 134019272 134019295 mRNA hsa-miR-9 JAM3 miRanda miRanda
14034 chr11 134019888 134019888 1 + T C rs113389782 134019878 + 134019858 134019898 41 AAAAGAAAATTTCTATTTAAACTGTAAATATATTGTCATAC AAAAGAAAATTTCTATTTAAACTGTAAATACATTGTCATAC < 41bp 1 0.138486403969225 1 0.916343212127686 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 JAM3 ENSG00000166086 UTR3 Human protein_coding chr11:134019878 chr11:134019888 . . 0 hm6A_associated_SNPs_13766 0 0 1 2 134019875 134019897 mRNA hsa-miR-425 JAM3 miRanda miRanda
14034 chr11 134019888 134019888 1 + T C rs113389782 134019878 + 134019858 134019898 41 AAAAGAAAATTTCTATTTAAACTGTAAATATATTGTCATAC AAAAGAAAATTTCTATTTAAACTGTAAATACATTGTCATAC < 41bp 1 0.138486403969225 1 0.916343212127686 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 JAM3 ENSG00000166086 UTR3 Human protein_coding chr11:134019878 chr11:134019888 . . 0 hm6A_associated_SNPs_13766 0 0 1 2 134019884 134019905 mRNA hsa-miR-543 JAM3 miRanda miRanda
14034 chr12 2998019 2998019 1 + G T rs113456952 2998006 + 2997986 2998026 41 TAAGATACTTTGTGTCATGAACAGTTCAGTTTAGTGTCATG TAAGATACTTTGTGTCATGAACAGTTCAGTTTATTGTCATG < 41bp 1 0.250027991215741 1 0.901175081729889 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 RHNO1 ENSG00000171792 UTR3 Human protein_coding chr12:2998006 chr12:2998019 . . 0 hm6A_associated_SNPs_13843 0 0 1 1 2998003 2998026 mRNA hsa-miR-425 C12orf32 miRanda miRanda
14034 chr12 2998019 2998019 1 + G T rs113456952 2998028 + 2998008 2998048 41 AGTTCAGTTTAGTGTCATGAACTATTCACTTCATATTTTTC AGTTCAGTTTATTGTCATGAACTATTCACTTCATATTTTTC < 41bp 1 0.159287530264452 1 0.671765446662903 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 RHNO1 ENSG00000171792 UTR3 Human protein_coding chr12:2998028 chr12:2998019 . . 0 hm6A_associated_SNPs_13844 0 0 1 1 2998003 2998026 mRNA hsa-miR-425 C12orf32 miRanda miRanda
14034 chr12 6500351 6500351 1 + C T rs149078929 6500366 + 6500346 6500386 41 CTGCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACT CTGCTTAGCCTCAGGCACGGACAGGGCACATGATACCAACT < 41bp 1 0.785846895116737 1 0.892433881759644 experiment 0.428306209766526 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 LTBR ENSG00000111321 UTR3 Human protein_coding chr12:6500366 chr12:6500351 . . 0 hm6A_associated_SNPs_13876 0 0 1 1 6500337 6500358 mRNA hsa-miR-485-5p LTBR miRanda miRanda
14034 chr12 6948882 6948882 1 + A C rs5439 6948869 + 6948849 6948889 41 TGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCC TGCCGGACCTGCAGCCCTGGACAGATGGGGAACCCTGTGCC < 41bp 1 0.713007765909644 1 0.929591178894043 experiment 0.573984468180712 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 P3H3 ENSG00000110811 UTR3 Human protein_coding chr12:6948869 chr12:6948882 . . 0 hm6A_associated_SNPs_13894 0 0 1 1 6948867 6948888 mRNA hsa-miR-128 LEPREL2 miRanda miRanda
14034 chr12 7085009 7085009 1 + T C rs199705379 7084994 + 7084974 7085014 41 GTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCAC GTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGACGTCAC < 41bp 1 0.112402335715119 1 0.891834020614624 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 EMG1 ENSG00000126749 UTR3 Human protein_coding chr12:7084994 chr12:7085009 . . 0 hm6A_associated_SNPs_13921 0 0 1 1 7084987 7085009 mRNA hsa-miR-421 EMG1 miRanda miRanda
14034 chr12 7085009 7085009 1 + T C rs199705379 7085001 + 7084981 7085021 41 AACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTT AACCTGTTCTGAAACCAGAAACTGTTGACGTCACATCCTTT < 41bp 1 0.366868245538551 1 0.959546566009521 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 EMG1 ENSG00000126749 UTR3 Human protein_coding chr12:7085001 chr12:7085009 . . 0 hm6A_associated_SNPs_13922 0 0 1 1 7084987 7085009 mRNA hsa-miR-421 EMG1 miRanda miRanda
14034 chr12 7085009 7085009 1 + T C rs199705379 7085023 + 7085003 7085043 41 TGTTGATGTCACATCCTTTGACCCTGGTCTGAGCTGACTGC TGTTGACGTCACATCCTTTGACCCTGGTCTGAGCTGACTGC < 41bp 1 0.0820139527350974 1 0.921711206436157 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 EMG1 ENSG00000126749 UTR3 Human protein_coding chr12:7085023 chr12:7085009 . . 0 hm6A_associated_SNPs_13923 0 0 1 1 7084987 7085009 mRNA hsa-miR-421 EMG1 miRanda miRanda
14034 chr12 7271203 7271203 1 + G T rs150061741 7271214 + 7271194 7271234 41 ATTGAAGAAGTGCATGCAAGACAGAATCGTGTGGGATATGC ATTGAAGAATTGCATGCAAGACAGAATCGTGTGGGATATGC < 41bp 1 0.310470012434647 1 0.959013342857361 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 C1RL-AS1 ENSG00000205885 ncRNA_exonic Human antisense chr12:7271214 chr12:7271203 . . 0 hm6A_associated_SNPs_13927 0 0 0 1 7271195 7271216 mRNA hsa-miR-431 LOC283314 miRanda miRanda
14034 chr12 7362839 7362839 1 + G C rs145760932 7362819 + 7362799 7362839 41 ATGTTTGGCCTGCCCCAGTGACAGTGGGACGGGCTGCCCTG ATGTTTGGCCTGCCCCAGTGACAGTGGGACGGGCTGCCCTC < 41bp 1 0.715814651025857 1 0.940506219863892 experiment 0.568370697948286 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 41 PEX5 ENSG00000139197 splicing Human protein_coding chr12:7362819 chr12:7362839 . . 0 hm6A_associated_SNPs_13933 1 0 1 1 7362832 7362854 mRNA hsa-miR-125a-3p PEX5 miRanda miRanda
14034 chr12 8928173 8928173 1 + G A rs150333388 8928164 + 8928144 8928184 41 CCTTAAACATAATTTCTTGGACACTACTAGAGAGACTTCGA CCTTAAACATAATTTCTTGGACACTACTAAAGAGACTTCGA < 41bp 1 0.762852184773968 1 0.969796419143677 experiment 0.474295630452065 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 RIMKLB ENSG00000166532 UTR3 Human protein_coding chr12:8928164 chr12:8928173 . . 0 hm6A_associated_SNPs_13937 0 0 1 1 8928171 8928192 mRNA hsa-miR-137 RIMKLB miRanda miRanda
14034 chr12 8928173 8928173 1 + G A rs150333388 8928178 + 8928158 8928198 41 TCTTGGACACTACTAGAGAGACTTCGAGGCAATAATAAAAG TCTTGGACACTACTAAAGAGACTTCGAGGCAATAATAAAAG < 41bp 1 0.523019341485589 1 0.95696485042572 experiment 0.953961317028822 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 RIMKLB ENSG00000166532 UTR3 Human protein_coding chr12:8928178 chr12:8928173 . . 0 hm6A_associated_SNPs_13938 0 0 1 1 8928171 8928192 mRNA hsa-miR-137 RIMKLB miRanda miRanda
14034 chr12 8929251 8929251 1 + A G rs147128275 8929243 + 8929223 8929263 41 ATCTAAACATACAAGTATGAACTATTCTATTTAAAATTTTT ATCTAAACATACAAGTATGAACTATTCTGTTTAAAATTTTT < 41bp 1 0.198853932343581 1 0.896325767040253 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 29 RIMKLB ENSG00000256661 ncRNA_intronic Human antisense chr12:8929243 chr12:8929251 . . 0 hm6A_associated_SNPs_13942 0 0 1 1 8929241 8929261 mRNA hsa-miR-590-3p RIMKLB miRanda miRanda
14034 chr12 9093085 9093085 1 - A G rs750243531 9093098 - 9093078 9093118 41 AGTGATTTTTTTCTTTCTAAACAGGGAAAATAATGTTACAA AGTGATTTTTTTCTTTCTAAACAGGGAAAATAACGTTACAA < 41bp 1 0.300709529248004 1 0.151990115642548 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 M6PR;PHC1 ENSG00000003056;ENSG00000111752 UTR3 Human other chr12:9093098 chr12:9093085 . . 0 hm6A_associated_SNPs_13948 0 0 0 1 9093079 9093101 mRNA hsa-miR-194 M6PR miRanda miRanda
14034 chr12 10374859 10374859 1 + C T rs139579008 10374850 + 10374830 10374870 41 GGGCAGAGATTCTATTTTTGACATTTGCACAAGACAGGTAG GGGCAGAGATTCTATTTTTGACATTTGCATAAGACAGGTAG < 41bp 1 0.511501876561733 1 0.0245425403118134 experiment 0.976996246876534 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 30 GABARAPL1 ENSG00000139112 UTR3 Human protein_coding chr12:10374850 chr12:10374859 . . 0 hm6A_associated_SNPs_13957 0 0 1 3 10374841 10374860 mRNA hsa-miR-19a GABARAPL1 miRanda miRanda
14034 chr12 10374859 10374859 1 + C T rs139579008 10374850 + 10374830 10374870 41 GGGCAGAGATTCTATTTTTGACATTTGCACAAGACAGGTAG GGGCAGAGATTCTATTTTTGACATTTGCATAAGACAGGTAG < 41bp 1 0.511501876561733 1 0.0245425403118134 experiment 0.976996246876534 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 30 GABARAPL1 ENSG00000139112 UTR3 Human protein_coding chr12:10374850 chr12:10374859 . . 0 hm6A_associated_SNPs_13957 0 0 1 3 10374841 10374860 mRNA hsa-miR-19b GABARAPL1 miRanda miRanda
14034 chr12 10374859 10374859 1 + C T rs139579008 10374850 + 10374830 10374870 41 GGGCAGAGATTCTATTTTTGACATTTGCACAAGACAGGTAG GGGCAGAGATTCTATTTTTGACATTTGCATAAGACAGGTAG < 41bp 1 0.511501876561733 1 0.0245425403118134 experiment 0.976996246876534 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 30 GABARAPL1 ENSG00000139112 UTR3 Human protein_coding chr12:10374850 chr12:10374859 . . 0 hm6A_associated_SNPs_13957 0 0 1 3 10374837 10374862 mRNA hsa-miR-182 GABARAPL1 miRanda miRanda
14034 chr12 10375135 10375135 1 + A C rs186126366 10375150 + 10375130 10375170 41 ATAGCATTAAACTGGAATTGACAAGAGTGTTGAGCATCCCT ATAGCCTTAAACTGGAATTGACAAGAGTGTTGAGCATCCCT < 41bp 1 0.381311232641772 1 0.000883251428604126 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 GABARAPL1 ENSG00000139112 UTR3 Human protein_coding chr12:10375150 chr12:10375135 . . 0 hm6A_associated_SNPs_13959 0 0 1 2 10375124 10375146 mRNA hsa-miR-145 GABARAPL1 miRanda miRanda
14034 chr12 10375135 10375135 1 + A C rs186126366 10375150 + 10375130 10375170 41 ATAGCATTAAACTGGAATTGACAAGAGTGTTGAGCATCCCT ATAGCCTTAAACTGGAATTGACAAGAGTGTTGAGCATCCCT < 41bp 1 0.381311232641772 1 0.000883251428604126 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 GABARAPL1 ENSG00000139112 UTR3 Human protein_coding chr12:10375150 chr12:10375135 . . 0 hm6A_associated_SNPs_13959 0 0 1 2 10375116 10375139 mRNA hsa-miR-155 GABARAPL1 miRanda miRanda
14034 chr12 12795102 12795102 1 + G T rs551337773 12795108 + 12795088 12795128 41 TCTCAAAGGATCTTGCTTTAACTTTCAACACTTAGAAAATC TCTCAAAGGATCTTTCTTTAACTTTCAACACTTAGAAAATC < 41bp 1 0.542730538773299 1 0.143641322851181 experiment 0.914538922453403 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 CREBL2 ENSG00000111269 UTR3 Human protein_coding chr12:12795108 chr12:12795102 . . 0 hm6A_associated_SNPs_13976 0 0 1 1 12795098 12795118 mRNA hsa-miR-653 CREBL2 miRanda miRanda
14034 chr12 12941576 12941576 1 + A G rs144759982 12941584 + 12941564 12941604 41 TTAGAAAGGCAAATTCTTGGACACAACCCTCCTGATTTATG TTAGAAAGGCAAGTTCTTGGACACAACCCTCCTGATTTATG < 41bp 1 0.604902167463624 1 0.238727539777756 experiment 0.790195665072751 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 13 APOLD1 ENSG00000178878 UTR3 Human protein_coding chr12:12941584 chr12:12941576 . . 0 hm6A_associated_SNPs_13982 0 0 1 1 12941573 12941594 mRNA hsa-miR-296-3p APOLD1 miRanda miRanda
14034 chr12 13368452 13368452 1 + G A rs78293404 13368435 + 13368415 13368455 41 GTGGTAAAAGTACCACACAAACTATGGGATCCAAGGGGCAG GTGGTAAAAGTACCACACAAACTATGGGATCCAAGGGACAG < 41bp 1 0.207000956612624 1 0.350500762462616 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 EMP1 ENSG00000134531 UTR3 Human protein_coding chr12:13368435 chr12:13368452 . . 0 hm6A_associated_SNPs_13996 0 0 0 1 13368450 13368473 mRNA hsa-miR-183 EMP1 miRanda miRanda
14034 chr12 16056346 16056346 1 + C A rs191287590 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TAATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.492162812801638 1 0.327862203121185 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056346 . . 0 hm6A_associated_SNPs_14000 0 0 1 6 16056337 16056359 mRNA hsa-miR-199a-5p STRAP miRanda miRanda
14034 chr12 16056346 16056346 1 + C A rs191287590 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TAATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.492162812801638 1 0.327862203121185 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056346 . . 0 hm6A_associated_SNPs_14000 0 0 1 6 16056339 16056360 mRNA hsa-miR-34a STRAP miRanda miRanda
14034 chr12 16056346 16056346 1 + C A rs191287590 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TAATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.492162812801638 1 0.327862203121185 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056346 . . 0 hm6A_associated_SNPs_14000 0 0 1 6 16056337 16056359 mRNA hsa-miR-199b-5p STRAP miRanda miRanda
14034 chr12 16056346 16056346 1 + C A rs191287590 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TAATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.492162812801638 1 0.327862203121185 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056346 . . 0 hm6A_associated_SNPs_14000 0 0 1 6 16056337 16056360 mRNA hsa-miR-34c-5p STRAP miRanda miRanda
14034 chr12 16056346 16056346 1 + C A rs191287590 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TAATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.492162812801638 1 0.327862203121185 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056346 . . 0 hm6A_associated_SNPs_14000 0 0 1 6 16056339 16056360 mRNA hsa-miR-449a STRAP miRanda miRanda
14034 chr12 16056346 16056346 1 + C A rs191287590 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TAATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.492162812801638 1 0.327862203121185 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056346 . . 0 hm6A_associated_SNPs_14000 0 0 1 6 16056339 16056360 mRNA hsa-miR-449b STRAP miRanda miRanda
14034 chr12 16056359 16056359 1 + C T rs1043072 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TCATTGTACACTGCTTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.459381071761369 1 0.286557197570801 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 15 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056359 . . 0 hm6A_associated_SNPs_14001 0 0 1 6 16056337 16056359 mRNA hsa-miR-199a-5p STRAP miRanda miRanda
14034 chr12 16056359 16056359 1 + C T rs1043072 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TCATTGTACACTGCTTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.459381071761369 1 0.286557197570801 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 15 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056359 . . 0 hm6A_associated_SNPs_14001 0 0 1 6 16056339 16056360 mRNA hsa-miR-34a STRAP miRanda miRanda
14034 chr12 16056359 16056359 1 + C T rs1043072 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TCATTGTACACTGCTTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.459381071761369 1 0.286557197570801 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 15 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056359 . . 0 hm6A_associated_SNPs_14001 0 0 1 6 16056337 16056359 mRNA hsa-miR-199b-5p STRAP miRanda miRanda
14034 chr12 16056359 16056359 1 + C T rs1043072 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TCATTGTACACTGCTTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.459381071761369 1 0.286557197570801 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 15 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056359 . . 0 hm6A_associated_SNPs_14001 0 0 1 6 16056337 16056360 mRNA hsa-miR-34c-5p STRAP miRanda miRanda
14034 chr12 16056359 16056359 1 + C T rs1043072 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TCATTGTACACTGCTTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.459381071761369 1 0.286557197570801 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 15 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056359 . . 0 hm6A_associated_SNPs_14001 0 0 1 6 16056339 16056360 mRNA hsa-miR-449a STRAP miRanda miRanda
14034 chr12 16056359 16056359 1 + C T rs1043072 16056365 + 16056345 16056385 41 TCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTG TCATTGTACACTGCTTCTGAACATCTAATTGTTTTTAGTTG < 41bp 1 0.459381071761369 1 0.286557197570801 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 15 STRAP ENSG00000023734 UTR3 Human protein_coding chr12:16056365 chr12:16056359 . . 0 hm6A_associated_SNPs_14001 0 0 1 6 16056339 16056360 mRNA hsa-miR-449b STRAP miRanda miRanda
14034 chr12 16189794 16189794 1 + C G rs563339873 16189782 + 16189762 16189802 41 AAAAAATTGGGCAGTAGGTAACTGGCATTCCTCTCTTTAAA AAAAAATTGGGCAGTAGGTAACTGGCATTCCTGTCTTTAAA < 41bp 1 0.268244762448007 1 0.930785298347473 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 DERA ENSG00000023697 UTR3 Human protein_coding chr12:16189782 chr12:16189794 . . 0 hm6A_associated_SNPs_14002 0 0 1 1 16189786 16189806 mRNA hsa-miR-590-3p DERA miRanda miRanda
14034 chr12 16189794 16189794 1 + C G rs563339873 16189814 + 16189794 16189834 41 CTCTTTAAAATTTCTACCGAACTTAATGGAATGGAAAAAGC GTCTTTAAAATTTCTACCGAACTTAATGGAATGGAAAAAGC < 41bp 1 0.428988861918914 1 0.946356177330017 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 DERA ENSG00000023697 UTR3 Human protein_coding chr12:16189814 chr12:16189794 . . 0 hm6A_associated_SNPs_14003 0 0 1 1 16189786 16189806 mRNA hsa-miR-590-3p DERA miRanda miRanda
14034 chr12 16517110 16517110 1 + T C rs4149206 16517096 + 16517076 16517116 41 GGAATTATGAACTGGGGTAAACCCATTTTGAATATTAGCAT GGAATTATGAACTGGGGTAAACCCATTTTGAATACTAGCAT < 41bp 1 0.0159138485915604 1 0.0497326850891113 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 35 MGST1 ENSG00000008394 UTR3 Human protein_coding chr12:16517096 chr12:16517110 . . 0 hm6A_associated_SNPs_14005 0 0 1 3 16517102 16517123 mRNA hsa-miR-96 MGST1 miRanda miRanda
14034 chr12 16517110 16517110 1 + T C rs4149206 16517096 + 16517076 16517116 41 GGAATTATGAACTGGGGTAAACCCATTTTGAATATTAGCAT GGAATTATGAACTGGGGTAAACCCATTTTGAATACTAGCAT < 41bp 1 0.0159138485915604 1 0.0497326850891113 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 35 MGST1 ENSG00000008394 UTR3 Human protein_coding chr12:16517096 chr12:16517110 . . 0 hm6A_associated_SNPs_14005 0 0 1 3 16517100 16517123 mRNA hsa-miR-182 MGST1 miRanda miRanda
14034 chr12 16517110 16517110 1 + T C rs4149206 16517096 + 16517076 16517116 41 GGAATTATGAACTGGGGTAAACCCATTTTGAATATTAGCAT GGAATTATGAACTGGGGTAAACCCATTTTGAATACTAGCAT < 41bp 1 0.0159138485915604 1 0.0497326850891113 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 35 MGST1 ENSG00000008394 UTR3 Human protein_coding chr12:16517096 chr12:16517110 . . 0 hm6A_associated_SNPs_14005 0 0 1 3 16517102 16517123 mRNA hsa-miR-1271 MGST1 miRanda miRanda
14034 chr12 18499628 18499628 1 + A G rs79247100 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCGATGTCTACTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0623803311241139 1 0.0137146711349487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 8 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499628 nonsynonymous SNV 0.903 0 hm6A_associated_SNPs_14008 0 0 0 1 18499614 18499638 mRNA hsa-miR-411 PIK3C2G miRanda miRanda
14034 chr12 18499629 18499629 1 + A T rs77656456 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCATTGTCTACTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0710293028979306 1 0.00976139307022095 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 9 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499629 nonsynonymous SNV 0.897 0 hm6A_associated_SNPs_14009 0 0 0 3 18499629 18499649 mRNA hsa-miR-320a PIK3C2G miRanda miRanda
14034 chr12 18499629 18499629 1 + A T rs77656456 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCATTGTCTACTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0710293028979306 1 0.00976139307022095 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 9 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499629 nonsynonymous SNV 0.897 0 hm6A_associated_SNPs_14009 0 0 0 3 18499614 18499638 mRNA hsa-miR-411 PIK3C2G miRanda miRanda
14034 chr12 18499629 18499629 1 + A T rs77656456 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCATTGTCTACTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0710293028979306 1 0.00976139307022095 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 9 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499629 nonsynonymous SNV 0.897 0 hm6A_associated_SNPs_14009 0 0 0 3 18499629 18499649 mRNA hsa-miR-320b PIK3C2G miRanda miRanda
14034 chr12 18499636 18499636 1 + C T rs17847788 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTATTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.061851846369444 1 0.00943803787231445 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 16 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499636 synonymous SNV . 0 hm6A_associated_SNPs_14010 0 0 0 5 18499629 18499649 mRNA hsa-miR-320a PIK3C2G miRanda miRanda
14034 chr12 18499636 18499636 1 + C T rs17847788 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTATTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.061851846369444 1 0.00943803787231445 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 16 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499636 synonymous SNV . 0 hm6A_associated_SNPs_14010 0 0 0 5 18499614 18499638 mRNA hsa-miR-411 PIK3C2G miRanda miRanda
14034 chr12 18499636 18499636 1 + C T rs17847788 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTATTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.061851846369444 1 0.00943803787231445 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 16 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499636 synonymous SNV . 0 hm6A_associated_SNPs_14010 0 0 0 5 18499629 18499649 mRNA hsa-miR-320b PIK3C2G miRanda miRanda
14034 chr12 18499636 18499636 1 + C T rs17847788 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTATTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.061851846369444 1 0.00943803787231445 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 16 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499636 synonymous SNV . 0 hm6A_associated_SNPs_14010 0 0 0 5 18499631 18499649 mRNA hsa-miR-320c PIK3C2G miRanda miRanda
14034 chr12 18499636 18499636 1 + C T rs17847788 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTATTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.061851846369444 1 0.00943803787231445 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 16 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499636 synonymous SNV . 0 hm6A_associated_SNPs_14010 0 0 0 5 18499631 18499649 mRNA hsa-miR-320d PIK3C2G miRanda miRanda
14034 chr12 21668914 21668914 1 + G T rs116507571 21668895 + 21668875 21668915 41 ATGTTAATGATGCTTAAGAAACTCTTGAAGGCTATTTGTGT ATGTTAATGATGCTTAAGAAACTCTTGAAGGCTATTTGTTT < 41bp 1 0.632909953701478 1 0.965188980102539 experiment 0.734180092597045 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 40 GOLT1B ENSG00000111711 UTR3 Human protein_coding chr12:21668895 chr12:21668914 . . 0 hm6A_associated_SNPs_14017 0 0 1 1 21668899 21668920 mRNA hsa-miR-495 GOLT1B miRanda miRanda
14034 chr12 21669819 21669819 1 + G A rs4611253 21669833 + 21669813 21669853 41 CTGACTGTGGTTTCTTAAGAACATGACACTAAAAAAAAAGT CTGACTATGGTTTCTTAAGAACATGACACTAAAAAAAAAGT < 41bp 1 0.467011782220706 1 0.309500515460968 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 GOLT1B ENSG00000111711 UTR3 Human protein_coding chr12:21669833 chr12:21669819 . . 0 hm6A_associated_SNPs_14019 0 0 1 1 21669818 21669840 mRNA hsa-miR-223 GOLT1B miRanda miRanda
14034 chr12 21670252 21670252 1 + G C rs71539413 21670264 + 21670244 21670284 41 GTGAAAATGGGATGATATTGACAAATGGAGACTCCTACCTC GTGAAAATCGGATGATATTGACAAATGGAGACTCCTACCTC < 41bp 1 0.49642803900643 1 0.471779733896255 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 GOLT1B ENSG00000111711 UTR3 Human protein_coding chr12:21670264 chr12:21670252 . . 0 hm6A_associated_SNPs_14020 0 0 1 1 21670252 21670274 mRNA hsa-miR-136 GOLT1B miRanda miRanda
14034 chr12 21670261 21670261 1 + T C rs112177514 21670264 + 21670244 21670284 41 GTGAAAATGGGATGATATTGACAAATGGAGACTCCTACCTC GTGAAAATGGGATGATACTGACAAATGGAGACTCCTACCTC < 41bp 1 0.519606157302062 1 0.193006247282028 experiment 0.960787685395876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 GOLT1B ENSG00000111711 UTR3 Human protein_coding chr12:21670264 chr12:21670261 . . 0 hm6A_associated_SNPs_14021 0 0 1 1 21670252 21670274 mRNA hsa-miR-136 GOLT1B miRanda miRanda
14034 chr12 21670261 21670261 1 + T C rs112177514 21670274 + 21670254 21670294 41 GATGATATTGACAAATGGAGACTCCTACCTCAATAGTTAAT GATGATACTGACAAATGGAGACTCCTACCTCAATAGTTAAT < 41bp 1 0.293272892598826 1 0.23837274312973 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 GOLT1B ENSG00000111711 UTR3 Human protein_coding chr12:21670274 chr12:21670261 . . 0 hm6A_associated_SNPs_14022 0 0 1 1 21670252 21670274 mRNA hsa-miR-136 GOLT1B miRanda miRanda
14034 chr12 22218567 22218567 1 + C A rs7606 22218562 + 22218542 22218582 41 GGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAA GGGACAGTGTGTATGGTAAGACATGACCTTCTATTAATAAA < 41bp 1 0.594957374725475 1 0.16966924071312 experiment 0.810085250549049 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 26 CMAS ENSG00000111726 UTR3 Human protein_coding chr12:22218562 chr12:22218567 . . 0 hm6A_associated_SNPs_14024 0 0 1 1 22218564 22218586 mRNA hsa-miR-590-3p CMAS miRanda miRanda
14034 chr12 22838193 22838193 1 + G A rs562651938 22838188 + 22838168 22838208 41 ATGTGAATTATTTATTATAAACTTAGCACGATTCTGTGACT ATGTGAATTATTTATTATAAACTTAACACGATTCTGTGACT < 41bp 1 0.331172538401411 1 0.10717847943306 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 26 ETNK1 ENSG00000139163 UTR3 Human protein_coding chr12:22838188 chr12:22838193 . . 0 hm6A_associated_SNPs_14028 0 0 1 2 22838191 22838212 mRNA hsa-miR-212 ETNK1 miRanda miRanda
14034 chr12 22838193 22838193 1 + G A rs562651938 22838188 + 22838168 22838208 41 ATGTGAATTATTTATTATAAACTTAGCACGATTCTGTGACT ATGTGAATTATTTATTATAAACTTAACACGATTCTGTGACT < 41bp 1 0.331172538401411 1 0.10717847943306 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 26 ETNK1 ENSG00000139163 UTR3 Human protein_coding chr12:22838188 chr12:22838193 . . 0 hm6A_associated_SNPs_14028 0 0 1 2 22838193 22838212 mRNA hsa-miR-132 ETNK1 miRanda miRanda
14034 chr12 22838193 22838193 1 + G A rs562651938 22838206 + 22838186 22838226 41 AAACTTAGCACGATTCTGTGACTGTTTTTCTCTGTTTCACG AAACTTAACACGATTCTGTGACTGTTTTTCTCTGTTTCACG < 41bp 1 0.31108429187708 1 0.346177667379379 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 8 ETNK1 ENSG00000139163 UTR3 Human protein_coding chr12:22838206 chr12:22838193 . . 0 hm6A_associated_SNPs_14029 0 0 1 2 22838191 22838212 mRNA hsa-miR-212 ETNK1 miRanda miRanda
14034 chr12 22838193 22838193 1 + G A rs562651938 22838206 + 22838186 22838226 41 AAACTTAGCACGATTCTGTGACTGTTTTTCTCTGTTTCACG AAACTTAACACGATTCTGTGACTGTTTTTCTCTGTTTCACG < 41bp 1 0.31108429187708 1 0.346177667379379 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 8 ETNK1 ENSG00000139163 UTR3 Human protein_coding chr12:22838206 chr12:22838193 . . 0 hm6A_associated_SNPs_14029 0 0 1 2 22838193 22838212 mRNA hsa-miR-132 ETNK1 miRanda miRanda
14034 chr12 25205541 25205541 1 + G A rs76640161 25205532 + 25205512 25205552 41 AGGCAACTTGACATATCAGGACTTTAACCGCTGTAGAAATA AGGCAACTTGACATATCAGGACTTTAACCACTGTAGAAATA < 41bp 1 0.188300137167139 1 0.989622294902802 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 LRMP ENSG00000118308 UTR5 Human protein_coding chr12:25205532 chr12:25205541 . . 0 hm6A_associated_SNPs_14036 0 0 0 1 25205527 25205548 mRNA hsa-miR-139-5p LRMP miRanda miRanda
14034 chr12 26224920 26224920 1 + C T rs115871338 26224904 + 26224884 26224924 41 AATGGTCTTCAGAGAAACAGACTGTTCATTTGAAGCCATTT AATGGTCTTCAGAGAAACAGACTGTTCATTTGAAGCTATTT < 41bp 1 0.0651529424870817 1 0.909095704555511 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 RASSF8 ENSG00000123094 UTR3 Human protein_coding chr12:26224904 chr12:26224920 . . 0 hm6A_associated_SNPs_14039 0 0 1 2 26224901 26224923 mRNA hsa-miR-135a RASSF8 miRanda miRanda
14034 chr12 26224920 26224920 1 + C T rs115871338 26224904 + 26224884 26224924 41 AATGGTCTTCAGAGAAACAGACTGTTCATTTGAAGCCATTT AATGGTCTTCAGAGAAACAGACTGTTCATTTGAAGCTATTT < 41bp 1 0.0651529424870817 1 0.909095704555511 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 37 RASSF8 ENSG00000123094 UTR3 Human protein_coding chr12:26224904 chr12:26224920 . . 0 hm6A_associated_SNPs_14039 0 0 1 2 26224901 26224923 mRNA hsa-miR-135b RASSF8 miRanda miRanda
14034 chr12 27118488 27118488 1 + T C rs180910432 27118482 + 27118462 27118502 41 TTATGTAGTTCATTTAGTTAACAGAATTGAAATGTTTGATA TTATGTAGTTCATTTAGTTAACAGAACTGAAATGTTTGATA < 41bp 1 0.392240745054173 1 0.188718855381012 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 FGFR1OP2 ENSG00000111790 UTR3 Human protein_coding chr12:27118482 chr12:27118488 . . 0 hm6A_associated_SNPs_14041 0 0 1 3 27118474 27118497 mRNA hsa-miR-181a FGFR1OP2 miRanda miRanda
14034 chr12 27118488 27118488 1 + T C rs180910432 27118482 + 27118462 27118502 41 TTATGTAGTTCATTTAGTTAACAGAATTGAAATGTTTGATA TTATGTAGTTCATTTAGTTAACAGAACTGAAATGTTTGATA < 41bp 1 0.392240745054173 1 0.188718855381012 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 FGFR1OP2 ENSG00000111790 UTR3 Human protein_coding chr12:27118482 chr12:27118488 . . 0 hm6A_associated_SNPs_14041 0 0 1 3 27118474 27118497 mRNA hsa-miR-181b FGFR1OP2 miRanda miRanda
14034 chr12 27118488 27118488 1 + T C rs180910432 27118482 + 27118462 27118502 41 TTATGTAGTTCATTTAGTTAACAGAATTGAAATGTTTGATA TTATGTAGTTCATTTAGTTAACAGAACTGAAATGTTTGATA < 41bp 1 0.392240745054173 1 0.188718855381012 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 FGFR1OP2 ENSG00000111790 UTR3 Human protein_coding chr12:27118482 chr12:27118488 . . 0 hm6A_associated_SNPs_14041 0 0 1 3 27118479 27118500 mRNA hsa-miR-494 FGFR1OP2 miRanda miRanda
14034 chr12 27470866 27470866 1 + G A rs6487601 27470852 + 27470832 27470872 41 ATCCACCTTTCTGCTCTGAAACACCTCAAGAAACGTACAGA ATCCACCTTTCTGCTCTGAAACACCTCAAGAAACATACAGA < 41bp 1 0.464757309488953 1 0.905663669109344 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 35 STK38L ENSG00000211455 CDS Human protein_coding chr12:27470852 chr12:27470866 synonymous SNV . 0 hm6A_associated_SNPs_14047 0 0 0 1 27470866 27470889 mRNA hsa-miR-145 STK38L miRanda miRanda
14034 chr12 31257568 31257568 1 + G A rs1804757 31257563 + 31257543 31257583 41 TGCAACAGCTGCCCCTGCTGACTGCGCCTGTCTTCTCCCTC TGCAACAGCTGCCCCTGCTGACTGCACCTGTCTTCTCCCTC < 41bp 1 0.383078626241995 1 0.92755138874054 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 DDX11 ENSG00000013573 UTR3 Human protein_coding chr12:31257563 chr12:31257568 . . 0 hm6A_associated_SNPs_14065 0 0 1 1 31257557 31257581 mRNA hsa-miR-185 DDX11 miRanda miRanda
14034 chr12 31257568 31257568 1 + G A rs1804757 31257586 + 31257566 31257606 41 GCGCCTGTCTTCTCCCTCTGACCCCAGAGAAAGGGGCTGTG GCACCTGTCTTCTCCCTCTGACCCCAGAGAAAGGGGCTGTG < 41bp 1 0.32670295614019 1 0.93014532327652 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 DDX11 ENSG00000013573 UTR3 Human protein_coding chr12:31257586 chr12:31257568 . . 0 hm6A_associated_SNPs_14066 0 0 1 1 31257557 31257581 mRNA hsa-miR-185 DDX11 miRanda miRanda
14034 chr12 32145987 32145987 1 + C T rs537135102 32145970 + 32145950 32145990 41 TTTTATACTTGTGAAACTGAACACAATTTTGGGACAACGTT TTTTATACTTGTGAAACTGAACACAATTTTGGGACAATGTT < 41bp 1 0.256290253598578 1 0.499514579772949 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 38 KIAA1551 ENSG00000174718 UTR3 Human protein_coding chr12:32145970 chr12:32145987 . . 0 hm6A_associated_SNPs_14088 0 0 1 4 32145981 32146001 mRNA hsa-miR-1 C12orf35 miRanda miRanda
14034 chr12 32145987 32145987 1 + C T rs537135102 32145970 + 32145950 32145990 41 TTTTATACTTGTGAAACTGAACACAATTTTGGGACAACGTT TTTTATACTTGTGAAACTGAACACAATTTTGGGACAATGTT < 41bp 1 0.256290253598578 1 0.499514579772949 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 38 KIAA1551 ENSG00000174718 UTR3 Human protein_coding chr12:32145970 chr12:32145987 . . 0 hm6A_associated_SNPs_14088 0 0 1 4 32145980 32146001 mRNA hsa-miR-142-3p C12orf35 miRanda miRanda
14034 chr12 32145987 32145987 1 + C T rs537135102 32145970 + 32145950 32145990 41 TTTTATACTTGTGAAACTGAACACAATTTTGGGACAACGTT TTTTATACTTGTGAAACTGAACACAATTTTGGGACAATGTT < 41bp 1 0.256290253598578 1 0.499514579772949 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 38 KIAA1551 ENSG00000174718 UTR3 Human protein_coding chr12:32145970 chr12:32145987 . . 0 hm6A_associated_SNPs_14088 0 0 1 4 32145981 32146001 mRNA hsa-miR-206 C12orf35 miRanda miRanda
14034 chr12 32145987 32145987 1 + C T rs537135102 32145970 + 32145950 32145990 41 TTTTATACTTGTGAAACTGAACACAATTTTGGGACAACGTT TTTTATACTTGTGAAACTGAACACAATTTTGGGACAATGTT < 41bp 1 0.256290253598578 1 0.499514579772949 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 38 KIAA1551 ENSG00000174718 UTR3 Human protein_coding chr12:32145970 chr12:32145987 . . 0 hm6A_associated_SNPs_14088 0 0 1 4 32145977 32146000 mRNA hsa-miR-155 C12orf35 miRanda miRanda
14034 chr12 32735037 32735037 1 + C T rs145115430 32735045 + 32735025 32735065 41 AGGGAAATGATACAGATAAGACTCAGGGTGCACAGACTTGT AGGGAAATGATATAGATAAGACTCAGGGTGCACAGACTTGT < 41bp 1 0.792260909704221 1 0.66745126247406 experiment 0.415478180591558 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FGD4 ENSG00000139132 CDS Human protein_coding chr12:32735045 chr12:32735037 nonsynonymous SNV 0.035 1 hm6A_associated_SNPs_14089 1 0 1 3 32735026 32735048 mRNA hsa-miR-21 FGD4 miRanda miRanda
14034 chr12 32735037 32735037 1 + C T rs145115430 32735045 + 32735025 32735065 41 AGGGAAATGATACAGATAAGACTCAGGGTGCACAGACTTGT AGGGAAATGATATAGATAAGACTCAGGGTGCACAGACTTGT < 41bp 1 0.792260909704221 1 0.66745126247406 experiment 0.415478180591558 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FGD4 ENSG00000139132 CDS Human protein_coding chr12:32735045 chr12:32735037 nonsynonymous SNV 0.035 1 hm6A_associated_SNPs_14089 1 0 1 3 32735032 32735053 mRNA hsa-miR-125b FGD4 miRanda miRanda
14034 chr12 32735037 32735037 1 + C T rs145115430 32735045 + 32735025 32735065 41 AGGGAAATGATACAGATAAGACTCAGGGTGCACAGACTTGT AGGGAAATGATATAGATAAGACTCAGGGTGCACAGACTTGT < 41bp 1 0.792260909704221 1 0.66745126247406 experiment 0.415478180591558 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 FGD4 ENSG00000139132 CDS Human protein_coding chr12:32735045 chr12:32735037 nonsynonymous SNV 0.035 1 hm6A_associated_SNPs_14089 1 0 1 3 32735034 32735053 mRNA hsa-miR-125a-5p FGD4 miRanda miRanda
14034 chr12 32896365 32896365 1 + G C rs1059422 32896375 + 32896355 32896395 41 GTAATACTGAGACTTTGTTGACTCAAAACTTGCTAGTTACT GTAATACTGACACTTTGTTGACTCAAAACTTGCTAGTTACT < 41bp 1 0.723837395845368 1 0.868819832801819 experiment 0.552325208309264 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 11 DNM1L ENSG00000087470 UTR3 Human protein_coding chr12:32896375 chr12:32896365 . . 0 hm6A_associated_SNPs_14092 3 0 1 1 32896355 32896377 mRNA hsa-miR-505 DNM1L miRanda miRanda
14034 chr12 32896366 32896366 1 + A T rs3200103 32896375 + 32896355 32896395 41 GTAATACTGAGACTTTGTTGACTCAAAACTTGCTAGTTACT GTAATACTGAGTCTTTGTTGACTCAAAACTTGCTAGTTACT < 41bp 1 0.706160191248489 1 0.846004247665405 experiment 0.587679617503021 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 DNM1L ENSG00000087470 UTR3 Human protein_coding chr12:32896375 chr12:32896366 . . 0 hm6A_associated_SNPs_14093 3 0 1 1 32896355 32896377 mRNA hsa-miR-505 DNM1L miRanda miRanda
14034 chr12 32896737 32896737 1 + A C rs77298476 32896749 + 32896729 32896769 41 CCAAGACAACATTTCATATGACTATAATGCATGTACTATAT CCAAGACACCATTTCATATGACTATAATGCATGTACTATAT < 41bp 1 0.473922745714874 1 0.80050790309906 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 DNM1L ENSG00000087470 UTR3 Human protein_coding chr12:32896749 chr12:32896737 . . 0 hm6A_associated_SNPs_14095 3 0 0 1 32896724 32896745 mRNA hsa-miR-203 DNM1L miRanda miRanda
14034 chr12 42841783 42841783 1 + C G rs142033497 42841769 + 42841749 42841789 41 GCCAAGCTAAATCCCACATAACAACTCTGGTATTCTTCCCT GCCAAGCTAAATCCCACATAACAACTCTGGTATTGTTCCCT < 41bp 1 0.154121829075285 1 0.00341889262199402 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PPHLN1 ENSG00000134283 UTR3 Human protein_coding chr12:42841769 chr12:42841783 . . 0 hm6A_associated_SNPs_14110 0 0 1 2 42841773 42841797 mRNA hsa-miR-376a PPHLN1 miRanda miRanda
14034 chr12 42841783 42841783 1 + C G rs142033497 42841769 + 42841749 42841789 41 GCCAAGCTAAATCCCACATAACAACTCTGGTATTCTTCCCT GCCAAGCTAAATCCCACATAACAACTCTGGTATTGTTCCCT < 41bp 1 0.154121829075285 1 0.00341889262199402 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PPHLN1 ENSG00000134283 UTR3 Human protein_coding chr12:42841769 chr12:42841783 . . 0 hm6A_associated_SNPs_14110 0 0 1 2 42841772 42841797 mRNA hsa-miR-376b PPHLN1 miRanda miRanda
14034 chr12 48362412 48362412 1 + G C rs6823 48362426 + 48362406 48362446 41 AGAAGTGGCAGCAGAGAGGGACCATCCAAATACCTAAGAGA AGAAGTCGCAGCAGAGAGGGACCATCCAAATACCTAAGAGA < 41bp 1 0.391793783474268 1 0.711808562278748 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 TMEM106C ENSG00000134291 UTR3 Human protein_coding chr12:48362426 chr12:48362412 . . 0 hm6A_associated_SNPs_14126 0 0 1 1 48362408 48362430 mRNA hsa-miR-328 TMEM106C miRanda miRanda
14034 chr12 49222346 49222346 1 + C T rs187149968 49222345 + 49222325 49222365 41 CCCTGCCAGGAAGCTTCTTAACATGTGACAGGACCAGGGAC CCCTGCCAGGAAGCTTCTTAATATGTGACAGGACCAGGGAC Direct Loss 1 0.506364133778784 1 0.0190626084804535 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 CACNB3 ENSG00000167535 UTR3 Human protein_coding chr12:49222345 chr12:49222346 . . 0 hm6A_associated_SNPs_14132 0 0 0 1 49222331 49222353 mRNA hsa-miR-27a CACNB3 miRanda miRanda
14034 chr12 50158544 50158544 1 + A G rs1049986 50158549 + 50158529 50158569 41 ACTTTTAAAGAAAATACCTAACAGATTTTTAATATAGTTAT ACTTTTAAAGAAAATGCCTAACAGATTTTTAATATAGTTAT < 41bp 1 0.0664062426529652 1 0.00435283780097961 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 TMBIM6 ENSG00000139644 UTR3 Human protein_coding chr12:50158549 chr12:50158544 . . 0 hm6A_associated_SNPs_14155 0 0 1 1 50158530 50158549 mRNA hsa-miR-202 TMBIM6 miRanda miRanda
14034 chr12 50492885 50492885 1 + G A rs527666580 50492905 + 50492885 50492925 41 GGGATGCTGTTGGTTCAAGGACAACACCAGAATGAAGAGGG AGGATGCTGTTGGTTCAAGGACAACACCAGAATGAAGAGGG < 41bp 1 0.741801050341706 1 0.827509820461273 experiment 0.516397899316587 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 SMARCD1 ENSG00000066117 UTR3 Human protein_coding chr12:50492905 chr12:50492885 . . 0 hm6A_associated_SNPs_14157 0 0 1 1 50492870 50492892 mRNA hsa-miR-324-5p SMARCD1 miRanda miRanda
14034 chr12 50514175 50514175 1 + T G rs149858137 50514157 + 50514137 50514177 41 TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTTGA TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTGGA < 41bp 1 0.763731893212762 1 0.576579689979553 experiment 0.472536213574476 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 COX14 ENSG00000272368 ncRNA_intronic Human antisense chr12:50514157 chr12:50514175 . . 0 hm6A_associated_SNPs_14158 0 0 1 4 50514174 50514196 mRNA hsa-miR-23a C12orf62 miRanda miRanda
14034 chr12 50514175 50514175 1 + T G rs149858137 50514157 + 50514137 50514177 41 TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTTGA TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTGGA < 41bp 1 0.763731893212762 1 0.576579689979553 experiment 0.472536213574476 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 COX14 ENSG00000272368 ncRNA_intronic Human antisense chr12:50514157 chr12:50514175 . . 0 hm6A_associated_SNPs_14158 0 0 1 4 50514160 50514183 mRNA hsa-miR-181a C12orf62 miRanda miRanda
14034 chr12 50514175 50514175 1 + T G rs149858137 50514157 + 50514137 50514177 41 TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTTGA TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTGGA < 41bp 1 0.763731893212762 1 0.576579689979553 experiment 0.472536213574476 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 COX14 ENSG00000272368 ncRNA_intronic Human antisense chr12:50514157 chr12:50514175 . . 0 hm6A_associated_SNPs_14158 0 0 1 4 50514174 50514196 mRNA hsa-miR-23b C12orf62 miRanda miRanda
14034 chr12 50514175 50514175 1 + T G rs149858137 50514157 + 50514137 50514177 41 TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTTGA TCTCTGGTTCTGCCAGTTTGACAGTTTATGGAGGCTTTGGA < 41bp 1 0.763731893212762 1 0.576579689979553 experiment 0.472536213574476 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 COX14 ENSG00000272368 ncRNA_intronic Human antisense chr12:50514157 chr12:50514175 . . 0 hm6A_associated_SNPs_14158 0 0 1 4 50514175 50514197 mRNA hsa-miR-136 C12orf62 miRanda miRanda
14034 chr12 51213775 51213775 1 + T C rs189354008 51213779 + 51213759 51213799 41 GGAAGCTTTGTAGAAATTAAACATATTCAAGGAGCAAGAAA GGAAGCTTTGTAGAAACTAAACATATTCAAGGAGCAAGAAA < 41bp 1 0.712424837019989 1 0.988483786582947 experiment 0.575150325960023 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 ATF1 ENSG00000123268 UTR3 Human protein_coding chr12:51213779 chr12:51213775 . . 0 hm6A_associated_SNPs_14163 0 0 1 1 51213766 51213788 mRNA hsa-miR-203 ATF1 miRanda miRanda
14034 chr12 51324799 51324799 1 + C T rs114891014 51324794 + 51324774 51324814 41 GAACTCCCCCTTCAAAGGAAACAGTCGACTTTCATAATTAG GAACTCCCCCTTCAAAGGAAACAGTTGACTTTCATAATTAG < 41bp 1 0.276737021548339 1 0.0236513614654541 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 26 METTL7A ENSG00000185432 UTR3 Human protein_coding chr12:51324794 chr12:51324799 . . 0 hm6A_associated_SNPs_14164 0 0 1 1 51324798 51324821 mRNA hsa-miR-155 METTL7A miRanda miRanda
14034 chr12 51453366 51453366 1 + A C rs3190077 51453374 + 51453354 51453394 41 AGCATGGCACACATGTGGGAACTGCAGACATTCCTCTCACA AGCATGGCACACCTGTGGGAACTGCAGACATTCCTCTCACA < 41bp 1 0.538136424204033 1 0.862946033477783 experiment 0.923727151591934 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 LETMD1 ENSG00000050426 UTR3 Human protein_coding chr12:51453374 chr12:51453366 . . 0 hm6A_associated_SNPs_14166 0 0 1 1 51453366 51453388 mRNA hsa-miR-613 LETMD1 miRanda miRanda
14034 chr12 51453366 51453366 1 + A C rs3190077 51453381 + 51453361 51453401 41 CACACATGTGGGAACTGCAGACATTCCTCTCACAGCTAGAA CACACCTGTGGGAACTGCAGACATTCCTCTCACAGCTAGAA < 41bp 1 0.664374517927143 1 0.905841827392578 experiment 0.671250964145713 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 LETMD1 ENSG00000050426 UTR3 Human protein_coding chr12:51453381 chr12:51453366 . . 0 hm6A_associated_SNPs_14167 0 0 1 1 51453366 51453388 mRNA hsa-miR-613 LETMD1 miRanda miRanda
14034 chr12 51453367 51453367 1 + T C rs111662542 51453374 + 51453354 51453394 41 AGCATGGCACACATGTGGGAACTGCAGACATTCCTCTCACA AGCATGGCACACACGTGGGAACTGCAGACATTCCTCTCACA < 41bp 1 0.546734117019992 1 0.780167937278748 experiment 0.906531765960016 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 LETMD1 ENSG00000050426 UTR3 Human protein_coding chr12:51453374 chr12:51453367 . . 0 hm6A_associated_SNPs_14168 0 0 1 1 51453366 51453388 mRNA hsa-miR-613 LETMD1 miRanda miRanda
14034 chr12 51453367 51453367 1 + T C rs111662542 51453381 + 51453361 51453401 41 CACACATGTGGGAACTGCAGACATTCCTCTCACAGCTAGAA CACACACGTGGGAACTGCAGACATTCCTCTCACAGCTAGAA < 41bp 1 0.620918295614808 1 0.868051648139954 experiment 0.758163408770384 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 LETMD1 ENSG00000050426 UTR3 Human protein_coding chr12:51453381 chr12:51453367 . . 0 hm6A_associated_SNPs_14169 0 0 1 1 51453366 51453388 mRNA hsa-miR-613 LETMD1 miRanda miRanda
14034 chr12 52389312 52389312 1 + G A rs538732203 52389321 + 52389301 52389341 41 ATAATAACTTTGAAGCCATAACTTTTAACTGGAGTGGTTTG ATAATAACTTTAAAGCCATAACTTTTAACTGGAGTGGTTTG < 41bp 1 0.536073545385606 1 0.214406818151474 experiment 0.927852909228789 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52389321 chr12:52389312 . . 0 hm6A_associated_SNPs_14179 0 0 1 3 52389297 52389320 mRNA hsa-miR-135a ACVR1B miRanda miRanda
14034 chr12 52389312 52389312 1 + G A rs538732203 52389321 + 52389301 52389341 41 ATAATAACTTTGAAGCCATAACTTTTAACTGGAGTGGTTTG ATAATAACTTTAAAGCCATAACTTTTAACTGGAGTGGTTTG < 41bp 1 0.536073545385606 1 0.214406818151474 experiment 0.927852909228789 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52389321 chr12:52389312 . . 0 hm6A_associated_SNPs_14179 0 0 1 3 52389312 52389334 mRNA hsa-miR-145 ACVR1B miRanda miRanda
14034 chr12 52389312 52389312 1 + G A rs538732203 52389321 + 52389301 52389341 41 ATAATAACTTTGAAGCCATAACTTTTAACTGGAGTGGTTTG ATAATAACTTTAAAGCCATAACTTTTAACTGGAGTGGTTTG < 41bp 1 0.536073545385606 1 0.214406818151474 experiment 0.927852909228789 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52389321 chr12:52389312 . . 0 hm6A_associated_SNPs_14179 0 0 1 3 52389297 52389320 mRNA hsa-miR-135b ACVR1B miRanda miRanda
14034 chr12 52389312 52389312 1 + G A rs538732203 52389328 + 52389308 52389348 41 CTTTGAAGCCATAACTTTTAACTGGAGTGGTTTGATTTCTT CTTTAAAGCCATAACTTTTAACTGGAGTGGTTTGATTTCTT < 41bp 1 0.562372184153732 1 0.167574167251587 experiment 0.875255631692536 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52389328 chr12:52389312 . . 0 hm6A_associated_SNPs_14180 0 0 1 3 52389297 52389320 mRNA hsa-miR-135a ACVR1B miRanda miRanda
14034 chr12 52389312 52389312 1 + G A rs538732203 52389328 + 52389308 52389348 41 CTTTGAAGCCATAACTTTTAACTGGAGTGGTTTGATTTCTT CTTTAAAGCCATAACTTTTAACTGGAGTGGTTTGATTTCTT < 41bp 1 0.562372184153732 1 0.167574167251587 experiment 0.875255631692536 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52389328 chr12:52389312 . . 0 hm6A_associated_SNPs_14180 0 0 1 3 52389312 52389334 mRNA hsa-miR-145 ACVR1B miRanda miRanda
14034 chr12 52389312 52389312 1 + G A rs538732203 52389328 + 52389308 52389348 41 CTTTGAAGCCATAACTTTTAACTGGAGTGGTTTGATTTCTT CTTTAAAGCCATAACTTTTAACTGGAGTGGTTTGATTTCTT < 41bp 1 0.562372184153732 1 0.167574167251587 experiment 0.875255631692536 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52389328 chr12:52389312 . . 0 hm6A_associated_SNPs_14180 0 0 1 3 52389297 52389320 mRNA hsa-miR-135b ACVR1B miRanda miRanda
14034 chr12 53434436 53434436 1 + T C rs370734872 53434443 + 53434423 53434463 41 TGGCATATATGAATTCTCAAACATTATCTGAATAAATTTTC TGGCATATATGAACTCTCAAACATTATCTGAATAAATTTTC < 41bp 1 0.482175369542849 1 0.033189445734024 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 14 EIF4B ENSG00000257337 ncRNA_intronic Human antisense chr12:53434443 chr12:53434436 . . 0 hm6A_associated_SNPs_14201 0 0 1 2 53434430 53434451 mRNA hsa-miR-190 EIF4B miRanda miRanda
14034 chr12 53434436 53434436 1 + T C rs370734872 53434443 + 53434423 53434463 41 TGGCATATATGAATTCTCAAACATTATCTGAATAAATTTTC TGGCATATATGAACTCTCAAACATTATCTGAATAAATTTTC < 41bp 1 0.482175369542849 1 0.033189445734024 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 14 EIF4B ENSG00000257337 ncRNA_intronic Human antisense chr12:53434443 chr12:53434436 . . 0 hm6A_associated_SNPs_14201 0 0 1 2 53434430 53434451 mRNA hsa-miR-190b EIF4B miRanda miRanda
14034 chr12 53435762 53435762 1 + T C rs11170384 53435770 + 53435750 53435790 41 TCCAAATAGTTATATCCAAAACTGTTTTTCCCTCTCCCCTA TCCAAATAGTTACATCCAAAACTGTTTTTCCCTCTCCCCTA < 41bp 1 0.111356985423357 1 0.134857475757599 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 EIF4B ENSG00000257337 ncRNA_intronic Human antisense chr12:53435770 chr12:53435762 . . 0 hm6A_associated_SNPs_14206 0 0 1 1 53435746 53435765 mRNA hsa-miR-410 EIF4B miRanda miRanda
14034 chr12 53682042 53682042 1 + T A rs183442980 53682055 + 53682035 53682075 41 AGGACCATCCCTGAGGAAGAACTGACTGACAACTGGAGAAA AGGACCAACCCTGAGGAAGAACTGACTGACAACTGGAGAAA < 41bp 1 0.322126760204168 1 0.993817746639252 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682055 chr12:53682042 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_14219 0 0 1 2 53682040 53682061 mRNA hsa-miR-223 ESPL1 miRanda miRanda
14034 chr12 53682042 53682042 1 + T A rs183442980 53682055 + 53682035 53682075 41 AGGACCATCCCTGAGGAAGAACTGACTGACAACTGGAGAAA AGGACCAACCCTGAGGAAGAACTGACTGACAACTGGAGAAA < 41bp 1 0.322126760204168 1 0.993817746639252 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682055 chr12:53682042 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_14219 0 0 1 2 53682033 53682053 mRNA hsa-miR-384 ESPL1 miRanda miRanda
14034 chr12 53682043 53682043 1 + C G rs61737629 53682055 + 53682035 53682075 41 AGGACCATCCCTGAGGAAGAACTGACTGACAACTGGAGAAA AGGACCATGCCTGAGGAAGAACTGACTGACAACTGGAGAAA < 41bp 1 0.325442212399915 1 0.995552778244019 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682055 chr12:53682043 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_14220 0 0 1 2 53682040 53682061 mRNA hsa-miR-223 ESPL1 miRanda miRanda
14034 chr12 53682043 53682043 1 + C G rs61737629 53682055 + 53682035 53682075 41 AGGACCATCCCTGAGGAAGAACTGACTGACAACTGGAGAAA AGGACCATGCCTGAGGAAGAACTGACTGACAACTGGAGAAA < 41bp 1 0.325442212399915 1 0.995552778244019 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682055 chr12:53682043 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_14220 0 0 1 2 53682033 53682053 mRNA hsa-miR-384 ESPL1 miRanda miRanda
14034 chr12 53682043 53682043 1 + C G rs61737629 53682063 + 53682043 53682083 41 CCCTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT GCCTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT < 41bp 1 0.662235907661698 1 0.985088288784027 experiment 0.675528184676604 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 1 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682063 chr12:53682043 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_14221 0 0 1 2 53682040 53682061 mRNA hsa-miR-223 ESPL1 miRanda miRanda
14034 chr12 53682043 53682043 1 + C G rs61737629 53682063 + 53682043 53682083 41 CCCTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT GCCTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT < 41bp 1 0.662235907661698 1 0.985088288784027 experiment 0.675528184676604 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 1 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682063 chr12:53682043 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_14221 0 0 1 2 53682033 53682053 mRNA hsa-miR-384 ESPL1 miRanda miRanda
14034 chr12 53682045 53682045 1 + C T rs542182232 53682055 + 53682035 53682075 41 AGGACCATCCCTGAGGAAGAACTGACTGACAACTGGAGAAA AGGACCATCCTTGAGGAAGAACTGACTGACAACTGGAGAAA < 41bp 1 0.290896333704009 1 0.992659449577332 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682055 chr12:53682045 nonsynonymous SNV 0.974 1 hm6A_associated_SNPs_14222 0 0 1 2 53682040 53682061 mRNA hsa-miR-223 ESPL1 miRanda miRanda
14034 chr12 53682045 53682045 1 + C T rs542182232 53682055 + 53682035 53682075 41 AGGACCATCCCTGAGGAAGAACTGACTGACAACTGGAGAAA AGGACCATCCTTGAGGAAGAACTGACTGACAACTGGAGAAA < 41bp 1 0.290896333704009 1 0.992659449577332 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682055 chr12:53682045 nonsynonymous SNV 0.974 1 hm6A_associated_SNPs_14222 0 0 1 2 53682033 53682053 mRNA hsa-miR-384 ESPL1 miRanda miRanda
14034 chr12 53682045 53682045 1 + C T rs542182232 53682063 + 53682043 53682083 41 CCCTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT CCTTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT < 41bp 1 0.671236481818193 1 0.975486874580383 experiment 0.657527036363614 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682063 chr12:53682045 nonsynonymous SNV 0.974 1 hm6A_associated_SNPs_14223 0 0 1 2 53682040 53682061 mRNA hsa-miR-223 ESPL1 miRanda miRanda
14034 chr12 53682045 53682045 1 + C T rs542182232 53682063 + 53682043 53682083 41 CCCTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT CCTTGAGGAAGAACTGACTGACAACTGGAGAAAAATGAGCT < 41bp 1 0.671236481818193 1 0.975486874580383 experiment 0.657527036363614 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682063 chr12:53682045 nonsynonymous SNV 0.974 1 hm6A_associated_SNPs_14223 0 0 1 2 53682033 53682053 mRNA hsa-miR-384 ESPL1 miRanda miRanda
14034 chr12 53895819 53895819 1 + C T rs143690659 53895833 + 53895813 53895853 41 TGGCCGCCAACCCAGGCAAGACCCCGATCAGCCTTCTGCAG TGGCCGTCAACCCAGGCAAGACCCCGATCAGCCTTCTGCAG < 41bp 1 0.219843041497175 1 0.0658015608787537 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53895833 chr12:53895819 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_14238 0 0 1 1 53895815 53895835 mRNA hsa-miR-431 TARBP2 miRanda miRanda
14034 chr12 54383936 54383936 1 + A C rs554252317 54383917 + 54383897 54383937 41 TAGAACATAGCAAAGCAAAGACAGAATGCCCCCCCCCCCAA TAGAACATAGCAAAGCAAAGACAGAATGCCCCCCCCCCCCA < 41bp 1 0.66537513897843 1 0.424189120531082 experiment 0.66924972204314 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 HOXC10 ENSG00000180818 UTR3 Human protein_coding chr12:54383917 chr12:54383936 . . 0 hm6A_associated_SNPs_14245 0 0 1 1 54383936 54383959 mRNA hsa-miR-214 HOXC10 miRanda miRanda
14034 chr12 54396625 54396625 1 + G T rs528839962 54396617 + 54396597 54396637 41 ACAAGGAAGGGGAAAAGAAAACTCTTGCGATTTGGGAGGGT ACAAGGAAGGGGAAAAGAAAACTCTTGCTATTTGGGAGGGT < 41bp 1 0.573315900686953 1 0.964832961559296 experiment 0.853368198626095 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 HOXC9 ENSG00000180806 UTR3 Human protein_coding chr12:54396617 chr12:54396625 . . 0 hm6A_associated_SNPs_14247 0 0 1 3 54396622 54396646 mRNA hsa-miR-141 HOXC9 miRanda miRanda
14034 chr12 54396625 54396625 1 + G T rs528839962 54396617 + 54396597 54396637 41 ACAAGGAAGGGGAAAAGAAAACTCTTGCGATTTGGGAGGGT ACAAGGAAGGGGAAAAGAAAACTCTTGCTATTTGGGAGGGT < 41bp 1 0.573315900686953 1 0.964832961559296 experiment 0.853368198626095 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 HOXC9 ENSG00000180806 UTR3 Human protein_coding chr12:54396617 chr12:54396625 . . 0 hm6A_associated_SNPs_14247 0 0 1 3 54396616 54396635 mRNA hsa-miR-150 HOXC9 miRanda miRanda
14034 chr12 54396625 54396625 1 + G T rs528839962 54396617 + 54396597 54396637 41 ACAAGGAAGGGGAAAAGAAAACTCTTGCGATTTGGGAGGGT ACAAGGAAGGGGAAAAGAAAACTCTTGCTATTTGGGAGGGT < 41bp 1 0.573315900686953 1 0.964832961559296 experiment 0.853368198626095 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 HOXC9 ENSG00000180806 UTR3 Human protein_coding chr12:54396617 chr12:54396625 . . 0 hm6A_associated_SNPs_14247 0 0 1 3 54396625 54396646 mRNA hsa-miR-200a HOXC9 miRanda miRanda
14034 chr12 54396731 54396731 1 + A C rs551243035 54396739 + 54396719 54396759 41 CAGCGCAACCGAAATAAATGACACATACAAATGTGATTTTT CAGCGCAACCGACATAAATGACACATACAAATGTGATTTTT < 41bp 1 0.418528349997401 1 0.902894496917725 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 HOXC9 ENSG00000180806 UTR3 Human protein_coding chr12:54396739 chr12:54396731 . . 0 hm6A_associated_SNPs_14248 0 0 1 1 54396727 54396745 mRNA hsa-miR-599 HOXC9 miRanda miRanda
14034 chr12 54449723 54449723 1 + T C rs11554014 54449737 + 54449717 54449757 41 ATTTACTTGATTATTGTAAAACTTGCAATAAAGAATTTTAG ATTTACCTGATTATTGTAAAACTTGCAATAAAGAATTTTAG < 41bp 1 0.129544229900619 1 0.00323790311813354 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 HOXC4 ENSG00000198353;ENSG00000273266 UTR3 Human other chr12:54449737 chr12:54449723 . . 0 hm6A_associated_SNPs_14252 0 0 1 3 54449705 54449727 mRNA hsa-miR-26a HOXC4 miRanda miRanda
14034 chr12 54449723 54449723 1 + T C rs11554014 54449737 + 54449717 54449757 41 ATTTACTTGATTATTGTAAAACTTGCAATAAAGAATTTTAG ATTTACCTGATTATTGTAAAACTTGCAATAAAGAATTTTAG < 41bp 1 0.129544229900619 1 0.00323790311813354 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 HOXC4 ENSG00000198353;ENSG00000273266 UTR3 Human other chr12:54449737 chr12:54449723 . . 0 hm6A_associated_SNPs_14252 0 0 1 3 54449706 54449727 mRNA hsa-miR-26b HOXC4 miRanda miRanda
14034 chr12 54449723 54449723 1 + T C rs11554014 54449737 + 54449717 54449757 41 ATTTACTTGATTATTGTAAAACTTGCAATAAAGAATTTTAG ATTTACCTGATTATTGTAAAACTTGCAATAAAGAATTTTAG < 41bp 1 0.129544229900619 1 0.00323790311813354 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 HOXC4 ENSG00000198353;ENSG00000273266 UTR3 Human other chr12:54449737 chr12:54449723 . . 0 hm6A_associated_SNPs_14252 0 0 1 3 54449710 54449727 mRNA hsa-miR-1297 HOXC4 miRanda miRanda
14034 chr12 56077964 56077964 1 + A C rs2293409 56077947 + 56077927 56077967 41 ACCTAGCAGAATGAGAGAAGACATTCATGTACCACCTACTA ACCTAGCAGAATGAGAGAAGACATTCATGTACCACCTCCTA < 41bp 1 0.470270693732415 1 0.525347650051117 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 METTL7B ENSG00000170439 UTR3 Human protein_coding chr12:56077947 chr12:56077964 . . 0 hm6A_associated_SNPs_14260 0 0 0 1 56077958 56077980 mRNA hsa-miR-185 METTL7B miRanda miRanda
14034 chr12 56145586 56145586 1 + G A rs141867773 56145599 + 56145579 56145619 41 CAGTTACGGGTCTGATAAAAACAGTACTGAACTAAAGTAAA CAGTTACAGGTCTGATAAAAACAGTACTGAACTAAAGTAAA < 41bp 1 0.699626683568799 1 0.635226249694824 experiment 0.600746632862403 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 GDF11 ENSG00000135414 UTR3 Human protein_coding chr12:56145599 chr12:56145586 . . 0 hm6A_associated_SNPs_14262 0 0 1 4 56145567 56145590 mRNA hsa-miR-99a GDF11 miRanda miRanda
14034 chr12 56145586 56145586 1 + G A rs141867773 56145599 + 56145579 56145619 41 CAGTTACGGGTCTGATAAAAACAGTACTGAACTAAAGTAAA CAGTTACAGGTCTGATAAAAACAGTACTGAACTAAAGTAAA < 41bp 1 0.699626683568799 1 0.635226249694824 experiment 0.600746632862403 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 GDF11 ENSG00000135414 UTR3 Human protein_coding chr12:56145599 chr12:56145586 . . 0 hm6A_associated_SNPs_14262 0 0 1 4 56145569 56145590 mRNA hsa-miR-100 GDF11 miRanda miRanda
14034 chr12 56145586 56145586 1 + G A rs141867773 56145599 + 56145579 56145619 41 CAGTTACGGGTCTGATAAAAACAGTACTGAACTAAAGTAAA CAGTTACAGGTCTGATAAAAACAGTACTGAACTAAAGTAAA < 41bp 1 0.699626683568799 1 0.635226249694824 experiment 0.600746632862403 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 GDF11 ENSG00000135414 UTR3 Human protein_coding chr12:56145599 chr12:56145586 . . 0 hm6A_associated_SNPs_14262 0 0 1 4 56145569 56145590 mRNA hsa-miR-99b GDF11 miRanda miRanda
14034 chr12 56145586 56145586 1 + G A rs141867773 56145599 + 56145579 56145619 41 CAGTTACGGGTCTGATAAAAACAGTACTGAACTAAAGTAAA CAGTTACAGGTCTGATAAAAACAGTACTGAACTAAAGTAAA < 41bp 1 0.699626683568799 1 0.635226249694824 experiment 0.600746632862403 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 GDF11 ENSG00000135414 UTR3 Human protein_coding chr12:56145599 chr12:56145586 . . 0 hm6A_associated_SNPs_14262 0 0 1 4 56145575 56145596 mRNA hsa-miR-361-5p GDF11 miRanda miRanda
14034 chr12 56386344 56386344 1 + A G rs3741500 56386342 + 56386322 56386362 41 CCTCCCCATTTTTTCAGAAAACACTTCTGACTCCTGTCCCT CCTCCCCATTTTTTCAGAAAACGCTTCTGACTCCTGTCCCT Direct Loss 1 0.680670536025211 1 0.0911764204502106 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 RAB5B ENSG00000255990 ncRNA_exonic Human other chr12:56386342 chr12:56386344 . . 0 hm6A_associated_SNPs_14268 0 0 1 1 56386334 56386355 mRNA hsa-miR-383 RAB5B miRanda miRanda
14034 chr12 56538221 56538221 1 + T G rs371024109 56538228 + 56538208 56538248 41 AGTCTCTTGTCACTTTGGAAACTGAGGACGCGTGGATTCTA AGTCTCTTGTCACGTTGGAAACTGAGGACGCGTGGATTCTA < 41bp 1 0.184291518047512 1 0.87300169467926 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ESYT1 ENSG00000139641 UTR3 Human protein_coding chr12:56538228 chr12:56538221 . . 0 hm6A_associated_SNPs_14284 0 0 1 2 56538200 56538222 mRNA hsa-miR-301a ESYT1 miRanda miRanda
14034 chr12 56538221 56538221 1 + T G rs371024109 56538228 + 56538208 56538248 41 AGTCTCTTGTCACTTTGGAAACTGAGGACGCGTGGATTCTA AGTCTCTTGTCACGTTGGAAACTGAGGACGCGTGGATTCTA < 41bp 1 0.184291518047512 1 0.87300169467926 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ESYT1 ENSG00000139641 UTR3 Human protein_coding chr12:56538228 chr12:56538221 . . 0 hm6A_associated_SNPs_14284 0 0 1 2 56538200 56538222 mRNA hsa-miR-301b ESYT1 miRanda miRanda
14034 chr12 57996156 57996156 1 + G C rs115151476 57996167 + 57996147 57996187 41 AGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG AGCCTGGGGCAAGATGTTTGACTATTGCTGCTCTTCACCAG < 41bp 1 0.646205068511055 1 0.67158842086792 experiment 0.707589862977889 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PIP4K2C ENSG00000166908 UTR3 Human protein_coding chr12:57996167 chr12:57996156 . . 0 hm6A_associated_SNPs_14311 0 0 1 3 57996155 57996179 mRNA hsa-miR-16 PIP4K2C miRanda miRanda
14034 chr12 57996156 57996156 1 + G C rs115151476 57996167 + 57996147 57996187 41 AGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG AGCCTGGGGCAAGATGTTTGACTATTGCTGCTCTTCACCAG < 41bp 1 0.646205068511055 1 0.67158842086792 experiment 0.707589862977889 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PIP4K2C ENSG00000166908 UTR3 Human protein_coding chr12:57996167 chr12:57996156 . . 0 hm6A_associated_SNPs_14311 0 0 1 3 57996156 57996179 mRNA hsa-miR-195 PIP4K2C miRanda miRanda
14034 chr12 57996156 57996156 1 + G C rs115151476 57996167 + 57996147 57996187 41 AGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG AGCCTGGGGCAAGATGTTTGACTATTGCTGCTCTTCACCAG < 41bp 1 0.646205068511055 1 0.67158842086792 experiment 0.707589862977889 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PIP4K2C ENSG00000166908 UTR3 Human protein_coding chr12:57996167 chr12:57996156 . . 0 hm6A_associated_SNPs_14311 0 0 1 3 57996154 57996179 mRNA hsa-miR-424 PIP4K2C miRanda miRanda
14034 chr12 58175717 58175717 1 + C T rs143072328 58175707 + 58175687 58175727 41 CACTTCCTGTAGAAGCAAGAACAAGCTCCTCTGCTTGGTAC CACTTCCTGTAGAAGCAAGAACAAGCTCCTTTGCTTGGTAC < 41bp 1 0.178161777292974 1 0.00739037990570068 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 EEF1AKMT3 ENSG00000123427 UTR3 Human protein_coding chr12:58175707 chr12:58175717 . . 0 hm6A_associated_SNPs_14321 0 0 1 2 58175696 58175717 mRNA hsa-miR-28-5p FAM119B miRanda miRanda
14034 chr12 58175717 58175717 1 + C T rs143072328 58175707 + 58175687 58175727 41 CACTTCCTGTAGAAGCAAGAACAAGCTCCTCTGCTTGGTAC CACTTCCTGTAGAAGCAAGAACAAGCTCCTTTGCTTGGTAC < 41bp 1 0.178161777292974 1 0.00739037990570068 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 EEF1AKMT3 ENSG00000123427 UTR3 Human protein_coding chr12:58175707 chr12:58175717 . . 0 hm6A_associated_SNPs_14321 0 0 1 2 58175697 58175717 mRNA hsa-miR-708 FAM119B miRanda miRanda
14034 chr12 62986722 62986722 1 + C T rs569505107 62986721 + 62986701 62986741 41 CAACAAAGGCTCCTGAATGAACAGCAGTGTAAGGCTTTAAT CAACAAAGGCTCCTGAATGAATAGCAGTGTAAGGCTTTAAT Direct Loss 1 0.790550233479692 1 0.889829635620117 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 MON2 ENSG00000061987 UTR3 Human protein_coding chr12:62986721 chr12:62986722 . . 0 hm6A_associated_SNPs_14336 0 0 1 1 62986722 62986743 mRNA hsa-miR-340 MON2 miRanda miRanda
14034 chr12 62986735 62986735 1 + C G rs538072517 62986721 + 62986701 62986741 41 CAACAAAGGCTCCTGAATGAACAGCAGTGTAAGGCTTTAAT CAACAAAGGCTCCTGAATGAACAGCAGTGTAAGGGTTTAAT < 41bp 1 0.794724409556788 1 0.927289247512817 experiment 0.410551180886424 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 MON2 ENSG00000061987 UTR3 Human protein_coding chr12:62986721 chr12:62986735 . . 0 hm6A_associated_SNPs_14337 0 0 1 1 62986722 62986743 mRNA hsa-miR-340 MON2 miRanda miRanda
14034 chr12 62986735 62986735 1 + C G rs538072517 62986749 + 62986729 62986769 41 GTAAGGCTTTAATAAATTAAACTGATGGGAGGGATAATTAA GTAAGGGTTTAATAAATTAAACTGATGGGAGGGATAATTAA < 41bp 1 0.7060033274479 1 0.901801228523254 experiment 0.587993345104199 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 MON2 ENSG00000061987 UTR3 Human protein_coding chr12:62986749 chr12:62986735 . . 0 hm6A_associated_SNPs_14338 0 0 1 1 62986722 62986743 mRNA hsa-miR-340 MON2 miRanda miRanda
14034 chr12 62986761 62986761 1 + G A rs74095830 62986749 + 62986729 62986769 41 GTAAGGCTTTAATAAATTAAACTGATGGGAGGGATAATTAA GTAAGGCTTTAATAAATTAAACTGATGGGAGGAATAATTAA < 41bp 1 0.736558291299108 1 0.935626447200775 experiment 0.526883417401784 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 MON2 ENSG00000061987 UTR3 Human protein_coding chr12:62986749 chr12:62986761 . . 0 hm6A_associated_SNPs_14339 0 0 1 1 62986753 62986776 mRNA hsa-miR-142-3p MON2 miRanda miRanda
14034 chr12 66698837 66698837 1 + G A rs35605829 66698825 + 66698805 66698845 41 ATCTTAGGGAAACACTAAGAACTTTCCACAAGGAAACTGGA ATCTTAGGGAAACACTAAGAACTTTCCACAAGAAAACTGGA < 41bp 1 0.476761392244627 1 0.97002112865448 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 HELB ENSG00000127311 CDS Human protein_coding chr12:66698825 chr12:66698837 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_14364 0 0 1 1 66698823 66698846 mRNA hsa-miR-145 HELB miRanda miRanda
14034 chr12 67707005 67707005 1 + T A rs575789314 67707012 + 67706992 67707032 41 AAAATCAAAAATCTTGCAAAACAAAAACCATGTTTCTTTTT AAAATCAAAAATCATGCAAAACAAAAACCATGTTTCTTTTT < 41bp 1 0.547367210373203 1 0.0250708162784576 experiment 0.905265579253593 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 CAND1 ENSG00000111530 UTR3 Human protein_coding chr12:67707012 chr12:67707005 . . 0 hm6A_associated_SNPs_14371 0 0 1 2 67706991 67707010 mRNA hsa-miR-31 CAND1 miRanda miRanda
14034 chr12 67707005 67707005 1 + T A rs575789314 67707012 + 67706992 67707032 41 AAAATCAAAAATCTTGCAAAACAAAAACCATGTTTCTTTTT AAAATCAAAAATCATGCAAAACAAAAACCATGTTTCTTTTT < 41bp 1 0.547367210373203 1 0.0250708162784576 experiment 0.905265579253593 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 CAND1 ENSG00000111530 UTR3 Human protein_coding chr12:67707012 chr12:67707005 . . 0 hm6A_associated_SNPs_14371 0 0 1 2 67706992 67707014 mRNA hsa-miR-129-5p CAND1 miRanda miRanda
14034 chr12 67707441 67707441 1 + A G rs1137465 67707421 + 67707401 67707441 41 CAGAAAATCAAGTCACAGTAACAATTTGCCACTTTTTTCTA CAGAAAATCAAGTCACAGTAACAATTTGCCACTTTTTTCTG < 41bp 1 0.490848815650414 1 0.0156781673431396 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 CAND1 ENSG00000111530 UTR3 Human protein_coding chr12:67707421 chr12:67707441 . . 0 hm6A_associated_SNPs_14372 0 0 1 2 67707426 67707447 mRNA hsa-miR-374a CAND1 miRanda miRanda
14034 chr12 67707441 67707441 1 + A G rs1137465 67707421 + 67707401 67707441 41 CAGAAAATCAAGTCACAGTAACAATTTGCCACTTTTTTCTA CAGAAAATCAAGTCACAGTAACAATTTGCCACTTTTTTCTG < 41bp 1 0.490848815650414 1 0.0156781673431396 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 CAND1 ENSG00000111530 UTR3 Human protein_coding chr12:67707421 chr12:67707441 . . 0 hm6A_associated_SNPs_14372 0 0 1 2 67707426 67707447 mRNA hsa-miR-374b CAND1 miRanda miRanda
14034 chr12 68056168 68056168 1 + C T rs139323718 68056172 + 68056152 68056192 41 AGCAACAACTTAGACACGTGACTGTAATATGCTGCAACTGT AGCAACAACTTAGACATGTGACTGTAATATGCTGCAACTGT < 41bp 1 0.231633451580432 1 0.760147571563721 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 DYRK2 ENSG00000235872 ncRNA_intronic Human antisense chr12:68056172 chr12:68056168 . . 0 hm6A_associated_SNPs_14375 0 0 1 3 68056165 68056187 mRNA hsa-miR-103 DYRK2 miRanda miRanda
14034 chr12 68056168 68056168 1 + C T rs139323718 68056172 + 68056152 68056192 41 AGCAACAACTTAGACACGTGACTGTAATATGCTGCAACTGT AGCAACAACTTAGACATGTGACTGTAATATGCTGCAACTGT < 41bp 1 0.231633451580432 1 0.760147571563721 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 DYRK2 ENSG00000235872 ncRNA_intronic Human antisense chr12:68056172 chr12:68056168 . . 0 hm6A_associated_SNPs_14375 0 0 1 3 68056165 68056187 mRNA hsa-miR-107 DYRK2 miRanda miRanda
14034 chr12 68056168 68056168 1 + C T rs139323718 68056172 + 68056152 68056192 41 AGCAACAACTTAGACACGTGACTGTAATATGCTGCAACTGT AGCAACAACTTAGACATGTGACTGTAATATGCTGCAACTGT < 41bp 1 0.231633451580432 1 0.760147571563721 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 DYRK2 ENSG00000235872 ncRNA_intronic Human antisense chr12:68056172 chr12:68056168 . . 0 hm6A_associated_SNPs_14375 0 0 1 3 68056147 68056170 mRNA hsa-miR-187 DYRK2 miRanda miRanda
14034 chr12 69235406 69235406 1 + G A rs1690916 69235407 + 69235387 69235427 41 AGTTGAAAAACAACTCTAAGACACTTTAAAGTACCTTCTTG AGTTGAAAAACAACTCTAAAACACTTTAAAGTACCTTCTTG < 41bp 1 0.357243885442692 1 0.11084857583046 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 MDM2 ENSG00000257181 ncRNA_exonic Human antisense chr12:69235407 chr12:69235406 . . 0 hm6A_associated_SNPs_14380 0 0 1 5 69235388 69235413 mRNA hsa-miR-302a MDM2 miRanda miRanda
14034 chr12 69235406 69235406 1 + G A rs1690916 69235407 + 69235387 69235427 41 AGTTGAAAAACAACTCTAAGACACTTTAAAGTACCTTCTTG AGTTGAAAAACAACTCTAAAACACTTTAAAGTACCTTCTTG < 41bp 1 0.357243885442692 1 0.11084857583046 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 MDM2 ENSG00000257181 ncRNA_exonic Human antisense chr12:69235407 chr12:69235406 . . 0 hm6A_associated_SNPs_14380 0 0 1 5 69235388 69235413 mRNA hsa-miR-302b MDM2 miRanda miRanda
14034 chr12 69235406 69235406 1 + G A rs1690916 69235407 + 69235387 69235427 41 AGTTGAAAAACAACTCTAAGACACTTTAAAGTACCTTCTTG AGTTGAAAAACAACTCTAAAACACTTTAAAGTACCTTCTTG < 41bp 1 0.357243885442692 1 0.11084857583046 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 MDM2 ENSG00000257181 ncRNA_exonic Human antisense chr12:69235407 chr12:69235406 . . 0 hm6A_associated_SNPs_14380 0 0 1 5 69235388 69235413 mRNA hsa-miR-302c MDM2 miRanda miRanda
14034 chr12 69235406 69235406 1 + G A rs1690916 69235407 + 69235387 69235427 41 AGTTGAAAAACAACTCTAAGACACTTTAAAGTACCTTCTTG AGTTGAAAAACAACTCTAAAACACTTTAAAGTACCTTCTTG < 41bp 1 0.357243885442692 1 0.11084857583046 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 MDM2 ENSG00000257181 ncRNA_exonic Human antisense chr12:69235407 chr12:69235406 . . 0 hm6A_associated_SNPs_14380 0 0 1 5 69235388 69235413 mRNA hsa-miR-302d MDM2 miRanda miRanda
14034 chr12 69235406 69235406 1 + G A rs1690916 69235407 + 69235387 69235427 41 AGTTGAAAAACAACTCTAAGACACTTTAAAGTACCTTCTTG AGTTGAAAAACAACTCTAAAACACTTTAAAGTACCTTCTTG < 41bp 1 0.357243885442692 1 0.11084857583046 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 MDM2 ENSG00000257181 ncRNA_exonic Human antisense chr12:69235407 chr12:69235406 . . 0 hm6A_associated_SNPs_14380 0 0 1 5 69235390 69235413 mRNA hsa-miR-373 MDM2 miRanda miRanda
14034 chr12 69235475 69235475 1 + G A rs114024903 69235462 + 69235442 69235482 41 GTTCCCAGCCTAGGTTTCAGACTTTTGCTTAAGGCCAGTTT GTTCCCAGCCTAGGTTTCAGACTTTTGCTTAAGACCAGTTT < 41bp 1 0.478967288047782 1 0.274607747793198 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 MDM2 ENSG00000257181 ncRNA_intronic Human antisense chr12:69235462 chr12:69235475 . . 0 hm6A_associated_SNPs_14382 0 0 1 2 69235456 69235481 mRNA hsa-miR-193a-3p MDM2 miRanda miRanda
14034 chr12 69235475 69235475 1 + G A rs114024903 69235462 + 69235442 69235482 41 GTTCCCAGCCTAGGTTTCAGACTTTTGCTTAAGGCCAGTTT GTTCCCAGCCTAGGTTTCAGACTTTTGCTTAAGACCAGTTT < 41bp 1 0.478967288047782 1 0.274607747793198 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 MDM2 ENSG00000257181 ncRNA_intronic Human antisense chr12:69235462 chr12:69235475 . . 0 hm6A_associated_SNPs_14382 0 0 1 2 69235456 69235481 mRNA hsa-miR-193b MDM2 miRanda miRanda
14034 chr12 69666562 69666562 1 + G A rs551536519 69666582 + 69666562 69666602 41 GCTTATCCAGTGTATATTAGACATTTTTGTGCTAAAATATA ACTTATCCAGTGTATATTAGACATTTTTGTGCTAAAATATA < 41bp 1 0.404605061926849 1 0.0616555511951447 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 CPSF6 ENSG00000111605 UTR3 Human protein_coding chr12:69666582 chr12:69666562 . . 0 hm6A_associated_SNPs_14387 0 0 1 2 69666542 69666566 mRNA hsa-miR-18a CPSF6 miRanda miRanda
14034 chr12 69666562 69666562 1 + G A rs551536519 69666582 + 69666562 69666602 41 GCTTATCCAGTGTATATTAGACATTTTTGTGCTAAAATATA ACTTATCCAGTGTATATTAGACATTTTTGTGCTAAAATATA < 41bp 1 0.404605061926849 1 0.0616555511951447 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 CPSF6 ENSG00000111605 UTR3 Human protein_coding chr12:69666582 chr12:69666562 . . 0 hm6A_associated_SNPs_14387 0 0 1 2 69666542 69666566 mRNA hsa-miR-18b CPSF6 miRanda miRanda
14034 chr12 69667400 69667400 1 + C T rs79623680 69667417 + 69667397 69667437 41 TGTCGCACTGTTACTGCGTAACACTTCTCAACATTCTGTAA TGTTGCACTGTTACTGCGTAACACTTCTCAACATTCTGTAA < 41bp 1 0.316597219824569 1 0.107559531927109 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 CPSF6 ENSG00000111605 UTR3 Human protein_coding chr12:69667417 chr12:69667400 . . 0 hm6A_associated_SNPs_14389 0 0 1 2 69667384 69667407 mRNA hsa-miR-148a CPSF6 miRanda miRanda
14034 chr12 69667400 69667400 1 + C T rs79623680 69667417 + 69667397 69667437 41 TGTCGCACTGTTACTGCGTAACACTTCTCAACATTCTGTAA TGTTGCACTGTTACTGCGTAACACTTCTCAACATTCTGTAA < 41bp 1 0.316597219824569 1 0.107559531927109 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 CPSF6 ENSG00000111605 UTR3 Human protein_coding chr12:69667417 chr12:69667400 . . 0 hm6A_associated_SNPs_14389 0 0 1 2 69667385 69667407 mRNA hsa-miR-152 CPSF6 miRanda miRanda
14034 chr12 69986785 69986785 1 + T C rs201962311 69986781 + 69986761 69986801 41 TGGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAG TGGTTCCCGGGTAAGAGTTGACTCCACAGCAAAGGTTGCAG < 41bp 1 0.272469267874121 1 0.8878493309021 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69986781 chr12:69986785 synonymous SNV . 0 hm6A_associated_SNPs_14396 0 0 1 1 69986783 69986804 mRNA hsa-miR-544 CCT2 miRanda miRanda
14034 chr12 69986788 69986788 1 + A G rs1043434 69986781 + 69986761 69986801 41 TGGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAG TGGTTCCCGGGTAAGAGTTGACTCTACGGCAAAGGTTGCAG < 41bp 1 0.312205800545183 1 0.952213883399963 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69986781 chr12:69986788 synonymous SNV . 0 hm6A_associated_SNPs_14397 0 0 1 1 69986783 69986804 mRNA hsa-miR-544 CCT2 miRanda miRanda
14034 chr12 69995241 69995241 1 + C A rs542682396 69995236 + 69995216 69995256 41 TAAGTTTGGATATTTAGCTGACCTTCGCTTTAACATAGGTC TAAGTTTGGATATTTAGCTGACCTTAGCTTTAACATAGGTC < 41bp 1 0.288435966473984 1 0.0266314148902893 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 26 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995236 chr12:69995241 . . 0 hm6A_associated_SNPs_14400 0 0 1 2 69995241 69995258 mRNA hsa-miR-192 CCT2 miRanda miRanda
14034 chr12 69995241 69995241 1 + C A rs542682396 69995236 + 69995216 69995256 41 TAAGTTTGGATATTTAGCTGACCTTCGCTTTAACATAGGTC TAAGTTTGGATATTTAGCTGACCTTAGCTTTAACATAGGTC < 41bp 1 0.288435966473984 1 0.0266314148902893 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 26 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995236 chr12:69995241 . . 0 hm6A_associated_SNPs_14400 0 0 1 2 69995241 69995258 mRNA hsa-miR-215 CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995305 69995326 mRNA hsa-miR-27a CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995307 69995329 mRNA hsa-miR-32 CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995305 69995326 mRNA hsa-miR-27b CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995306 69995327 mRNA hsa-miR-153 CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995308 69995330 mRNA hsa-miR-155 CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995308 69995329 mRNA hsa-miR-363 CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995305 69995329 mRNA hsa-miR-367 CCT2 miRanda miRanda
14034 chr12 69995326 69995326 1 + A G rs10506567 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCGTTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT < 41bp 1 0.244704305673064 1 0.368610918521881 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995326 . . 0 hm6A_associated_SNPs_14401 0 0 1 8 69995314 69995335 mRNA hsa-miR-590-3p CCT2 miRanda miRanda
14034 chr12 69995347 69995347 1 + A G rs3177122 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCATTAAAATAAAAATTTGAACAGTTACTTGGTTCTTATGT < 41bp 1 0.16180112254805 1 0.384045332670212 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995347 . . 0 hm6A_associated_SNPs_14402 0 0 1 4 69995335 69995356 mRNA hsa-miR-26a CCT2 miRanda miRanda
14034 chr12 69995347 69995347 1 + A G rs3177122 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCATTAAAATAAAAATTTGAACAGTTACTTGGTTCTTATGT < 41bp 1 0.16180112254805 1 0.384045332670212 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995347 . . 0 hm6A_associated_SNPs_14402 0 0 1 4 69995336 69995356 mRNA hsa-miR-26b CCT2 miRanda miRanda
14034 chr12 69995347 69995347 1 + A G rs3177122 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCATTAAAATAAAAATTTGAACAGTTACTTGGTTCTTATGT < 41bp 1 0.16180112254805 1 0.384045332670212 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995347 . . 0 hm6A_associated_SNPs_14402 0 0 1 4 69995327 69995348 mRNA hsa-miR-375 CCT2 miRanda miRanda
14034 chr12 69995347 69995347 1 + A G rs3177122 69995344 + 69995324 69995364 41 GCATTAAAATAAAAATTTGAACAATTACTTGGTTCTTATGT GCATTAAAATAAAAATTTGAACAGTTACTTGGTTCTTATGT < 41bp 1 0.16180112254805 1 0.384045332670212 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 CCT2 ENSG00000166226 UTR3 Human protein_coding chr12:69995344 chr12:69995347 . . 0 hm6A_associated_SNPs_14402 0 0 1 4 69995340 69995356 mRNA hsa-miR-1297 CCT2 miRanda miRanda
14034 chr12 72094870 72094870 1 + G A rs113385533 72094854 + 72094834 72094874 41 CTTTCATCCTAAGAATAATAACTGTAATGGCAAAGCGGAAA CTTTCATCCTAAGAATAATAACTGTAATGGCAAAGCAGAAA < 41bp 1 0.635261508315795 1 0.775436758995056 experiment 0.72947698336841 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 37 TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72094854 chr12:72094870 . . 0 hm6A_associated_SNPs_14409 0 0 1 2 72094851 72094873 mRNA hsa-miR-204 TMEM19 miRanda miRanda
14034 chr12 72094870 72094870 1 + G A rs113385533 72094854 + 72094834 72094874 41 CTTTCATCCTAAGAATAATAACTGTAATGGCAAAGCGGAAA CTTTCATCCTAAGAATAATAACTGTAATGGCAAAGCAGAAA < 41bp 1 0.635261508315795 1 0.775436758995056 experiment 0.72947698336841 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 37 TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72094854 chr12:72094870 . . 0 hm6A_associated_SNPs_14409 0 0 1 2 72094851 72094873 mRNA hsa-miR-211 TMEM19 miRanda miRanda
14034 chr12 72179549 72179549 1 + A G rs148980156 72179566 + 72179546 72179586 41 CCAATGGAATTATAGAATTAACAGTATTTTAAATTACGTTT CCAGTGGAATTATAGAATTAACAGTATTTTAAATTACGTTT < 41bp 1 0.759936107663139 1 0.606513977050781 experiment 0.480127784673721 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179566 chr12:72179549 . . 0 hm6A_associated_SNPs_14413 0 0 1 2 72179540 72179560 mRNA hsa-miR-374a RAB21 miRanda miRanda
14034 chr12 72179549 72179549 1 + A G rs148980156 72179566 + 72179546 72179586 41 CCAATGGAATTATAGAATTAACAGTATTTTAAATTACGTTT CCAGTGGAATTATAGAATTAACAGTATTTTAAATTACGTTT < 41bp 1 0.759936107663139 1 0.606513977050781 experiment 0.480127784673721 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179566 chr12:72179549 . . 0 hm6A_associated_SNPs_14413 0 0 1 2 72179540 72179560 mRNA hsa-miR-374b RAB21 miRanda miRanda
14034 chr12 72180617 72180617 1 + A G rs76519789 72180632 + 72180612 72180652 41 TTGTTATTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA TTGTTGTTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA < 41bp 1 0.33603641730909 1 0.011035829782486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72180632 chr12:72180617 . . 0 hm6A_associated_SNPs_14416 0 0 1 4 72180601 72180623 mRNA hsa-miR-374a RAB21 miRanda miRanda
14034 chr12 72180617 72180617 1 + A G rs76519789 72180632 + 72180612 72180652 41 TTGTTATTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA TTGTTGTTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA < 41bp 1 0.33603641730909 1 0.011035829782486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72180632 chr12:72180617 . . 0 hm6A_associated_SNPs_14416 0 0 1 4 72180599 72180622 mRNA hsa-miR-410 RAB21 miRanda miRanda
14034 chr12 72180617 72180617 1 + A G rs76519789 72180632 + 72180612 72180652 41 TTGTTATTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA TTGTTGTTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA < 41bp 1 0.33603641730909 1 0.011035829782486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72180632 chr12:72180617 . . 0 hm6A_associated_SNPs_14416 0 0 1 4 72180596 72180617 mRNA hsa-miR-495 RAB21 miRanda miRanda
14034 chr12 72180617 72180617 1 + A G rs76519789 72180632 + 72180612 72180652 41 TTGTTATTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA TTGTTGTTATAGAAGAGATGACTTCTGCTGATTTTGCTTTA < 41bp 1 0.33603641730909 1 0.011035829782486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72180632 chr12:72180617 . . 0 hm6A_associated_SNPs_14416 0 0 1 4 72180601 72180623 mRNA hsa-miR-374b RAB21 miRanda miRanda
14034 chr12 74932803 74932803 1 + C G rs3892342 74932790 + 74932770 74932810 41 AGCAAGAAGAAAAGGTCAAAACCACGTGTTTCCCAAAAGTC AGCAAGAAGAAAAGGTCAAAACCACGTGTTTCCGAAAAGTC < 41bp 1 0.163056583612507 1 0.857898056507111 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ATXN7L3B ENSG00000253719 UTR3 Human protein_coding chr12:74932790 chr12:74932803 . . 0 hm6A_associated_SNPs_14419 0 0 1 2 74932791 74932814 mRNA hsa-miR-378 ATXN7L3B miRanda miRanda
14034 chr12 74932803 74932803 1 + C G rs3892342 74932790 + 74932770 74932810 41 AGCAAGAAGAAAAGGTCAAAACCACGTGTTTCCCAAAAGTC AGCAAGAAGAAAAGGTCAAAACCACGTGTTTCCGAAAAGTC < 41bp 1 0.163056583612507 1 0.857898056507111 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ATXN7L3B ENSG00000253719 UTR3 Human protein_coding chr12:74932790 chr12:74932803 . . 0 hm6A_associated_SNPs_14419 0 0 1 2 74932793 74932814 mRNA hsa-miR-422a ATXN7L3B miRanda miRanda
14034 chr12 74932803 74932803 1 + C G rs3892342 74932814 + 74932794 74932834 41 CGTGTTTCCCAAAAGTCCAGACTACAATGATTCAGCTGACT CGTGTTTCCGAAAAGTCCAGACTACAATGATTCAGCTGACT < 41bp 1 0.439566811261091 1 0.95176088809967 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 10 ATXN7L3B ENSG00000253719 UTR3 Human protein_coding chr12:74932814 chr12:74932803 . . 0 hm6A_associated_SNPs_14420 0 0 1 2 74932791 74932814 mRNA hsa-miR-378 ATXN7L3B miRanda miRanda
14034 chr12 74932803 74932803 1 + C G rs3892342 74932814 + 74932794 74932834 41 CGTGTTTCCCAAAAGTCCAGACTACAATGATTCAGCTGACT CGTGTTTCCGAAAAGTCCAGACTACAATGATTCAGCTGACT < 41bp 1 0.439566811261091 1 0.95176088809967 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 10 ATXN7L3B ENSG00000253719 UTR3 Human protein_coding chr12:74932814 chr12:74932803 . . 0 hm6A_associated_SNPs_14420 0 0 1 2 74932793 74932814 mRNA hsa-miR-422a ATXN7L3B miRanda miRanda
14034 chr12 79844982 79844982 1 + G A rs183247690 79844971 + 79844951 79844991 41 TCTTTTGCCTTTTAGGCCAGACATAGCAAACGCTTTATAAT TCTTTTGCCTTTTAGGCCAGACATAGCAAACACTTTATAAT < 41bp 1 0.192785266237589 1 0.523729801177979 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 SYT1 ENSG00000257894 ncRNA_intronic Human lincRNA chr12:79844971 chr12:79844982 . . 0 hm6A_associated_SNPs_14436 0 0 0 1 79844969 79844990 mRNA hsa-miR-340 SYT1 miRanda miRanda
14034 chr12 79844982 79844982 1 + G A rs183247690 79845000 + 79844980 79845020 41 ACGCTTTATAATTGGCATAGACATAAAGGATAAAAGGAAAA ACACTTTATAATTGGCATAGACATAAAGGATAAAAGGAAAA < 41bp 1 0.177066111550381 1 0.513279914855957 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 3 SYT1 ENSG00000257894 ncRNA_intronic Human lincRNA chr12:79845000 chr12:79844982 . . 0 hm6A_associated_SNPs_14437 0 0 0 1 79844969 79844990 mRNA hsa-miR-340 SYT1 miRanda miRanda
14034 chr12 86276687 86276687 1 + T A rs113890081 86276699 + 86276679 86276719 41 TCTTCCTATTTTAATGAATGACATTGAACTGAATTTTTTGT TCTTCCTAATTTAATGAATGACATTGAACTGAATTTTTTGT < 41bp 1 0.0559885155166284 1 0.720436811447144 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 NTS ENSG00000133636 UTR3 Human protein_coding chr12:86276699 chr12:86276687 . . 0 hm6A_associated_SNPs_14453 0 0 0 4 86276678 86276700 mRNA hsa-miR-181a NTS miRanda miRanda
14034 chr12 86276687 86276687 1 + T A rs113890081 86276699 + 86276679 86276719 41 TCTTCCTATTTTAATGAATGACATTGAACTGAATTTTTTGT TCTTCCTAATTTAATGAATGACATTGAACTGAATTTTTTGT < 41bp 1 0.0559885155166284 1 0.720436811447144 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 NTS ENSG00000133636 UTR3 Human protein_coding chr12:86276699 chr12:86276687 . . 0 hm6A_associated_SNPs_14453 0 0 0 4 86276678 86276700 mRNA hsa-miR-181b NTS miRanda miRanda
14034 chr12 86276687 86276687 1 + T A rs113890081 86276699 + 86276679 86276719 41 TCTTCCTATTTTAATGAATGACATTGAACTGAATTTTTTGT TCTTCCTAATTTAATGAATGACATTGAACTGAATTTTTTGT < 41bp 1 0.0559885155166284 1 0.720436811447144 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 NTS ENSG00000133636 UTR3 Human protein_coding chr12:86276699 chr12:86276687 . . 0 hm6A_associated_SNPs_14453 0 0 0 4 86276679 86276700 mRNA hsa-miR-181c NTS miRanda miRanda
14034 chr12 86276687 86276687 1 + T A rs113890081 86276699 + 86276679 86276719 41 TCTTCCTATTTTAATGAATGACATTGAACTGAATTTTTTGT TCTTCCTAATTTAATGAATGACATTGAACTGAATTTTTTGT < 41bp 1 0.0559885155166284 1 0.720436811447144 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 NTS ENSG00000133636 UTR3 Human protein_coding chr12:86276699 chr12:86276687 . . 0 hm6A_associated_SNPs_14453 0 0 0 4 86276678 86276700 mRNA hsa-miR-181d NTS miRanda miRanda
14034 chr12 88548133 88548133 1 + T C rs117274752 88548153 + 88548133 88548173 41 TACCAGATCAAAAGGACCAGACAATTCCATAAGTACATGTC CACCAGATCAAAAGGACCAGACAATTCCATAAGTACATGTC < 41bp 1 0.451145929639829 1 0.842543005943298 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88548153 chr12:88548133 synonymous SNV . 0 hm6A_associated_SNPs_14456 0 0 1 2 88548132 88548153 mRNA hsa-miR-133a TMTC3 miRanda miRanda
14034 chr12 88548133 88548133 1 + T C rs117274752 88548153 + 88548133 88548173 41 TACCAGATCAAAAGGACCAGACAATTCCATAAGTACATGTC CACCAGATCAAAAGGACCAGACAATTCCATAAGTACATGTC < 41bp 1 0.451145929639829 1 0.842543005943298 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88548153 chr12:88548133 synonymous SNV . 0 hm6A_associated_SNPs_14456 0 0 1 2 88548132 88548153 mRNA hsa-miR-133b TMTC3 miRanda miRanda
14034 chr12 93895001 93895001 1 + G A rs148733700 93894990 + 93894970 93895010 41 GAATCTGAATCCTCCAAAAGACAGATGATGCGGAGGTTCCT GAATCTGAATCCTCCAAAAGACAGATGATGCAGAGGTTCCT < 41bp 1 0.769801470417772 1 0.264520347118378 experiment 0.460397059164455 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 32 MRPL42 ENSG00000198015 UTR3 Human protein_coding chr12:93894990 chr12:93895001 . . 0 hm6A_associated_SNPs_14463 0 0 1 1 93894998 93895012 mRNA hsa-miR-873 MRPL42 miRanda miRanda
14034 chr12 93969184 93969184 1 + G A rs17021316 93969180 + 93969160 93969200 41 CCTTCCTAAGGCTGACCAAGACCTGTTGATCCTTTTAGATT CCTTCCTAAGGCTGACCAAGACCTATTGATCCTTTTAGATT < 41bp 1 0.341573200085632 1 0.612538814544678 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 25 SOCS2 ENSG00000120833 UTR3 Human protein_coding chr12:93969180 chr12:93969184 . . 0 hm6A_associated_SNPs_14470 0 0 1 2 93969162 93969187 mRNA hsa-miR-132 SOCS2 miRanda miRanda
14034 chr12 93969184 93969184 1 + G A rs17021316 93969180 + 93969160 93969200 41 CCTTCCTAAGGCTGACCAAGACCTGTTGATCCTTTTAGATT CCTTCCTAAGGCTGACCAAGACCTATTGATCCTTTTAGATT < 41bp 1 0.341573200085632 1 0.612538814544678 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 25 SOCS2 ENSG00000120833 UTR3 Human protein_coding chr12:93969180 chr12:93969184 . . 0 hm6A_associated_SNPs_14470 0 0 1 2 93969167 93969189 mRNA hsa-miR-421 SOCS2 miRanda miRanda
14034 chr12 93969188 93969188 1 + A G rs551736430 93969180 + 93969160 93969200 41 CCTTCCTAAGGCTGACCAAGACCTGTTGATCCTTTTAGATT CCTTCCTAAGGCTGACCAAGACCTGTTGGTCCTTTTAGATT < 41bp 1 0.33687344393653 1 0.633220613002777 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 29 SOCS2 ENSG00000120833 UTR3 Human protein_coding chr12:93969180 chr12:93969188 . . 0 hm6A_associated_SNPs_14471 0 0 1 1 93969167 93969189 mRNA hsa-miR-421 SOCS2 miRanda miRanda
14034 chr12 96660980 96660980 1 + G T rs375758278 96660989 + 96660969 96661009 41 CCACAATTAAGGACTCATTAACTGATGAAACAAATTTGTCC CCACAATTAAGTACTCATTAACTGATGAAACAAATTTGTCC < 41bp 1 0.794200859403505 1 0.843208074569702 experiment 0.41159828119299 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660989 chr12:96660980 . . 0 hm6A_associated_SNPs_14494 0 0 1 3 96660976 96660997 mRNA hsa-miR-27a ELK3 miRanda miRanda
14034 chr12 96660980 96660980 1 + G T rs375758278 96660989 + 96660969 96661009 41 CCACAATTAAGGACTCATTAACTGATGAAACAAATTTGTCC CCACAATTAAGTACTCATTAACTGATGAAACAAATTTGTCC < 41bp 1 0.794200859403505 1 0.843208074569702 experiment 0.41159828119299 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660989 chr12:96660980 . . 0 hm6A_associated_SNPs_14494 0 0 1 3 96660974 96660995 mRNA hsa-miR-223 ELK3 miRanda miRanda
14034 chr12 96660980 96660980 1 + G T rs375758278 96660989 + 96660969 96661009 41 CCACAATTAAGGACTCATTAACTGATGAAACAAATTTGTCC CCACAATTAAGTACTCATTAACTGATGAAACAAATTTGTCC < 41bp 1 0.794200859403505 1 0.843208074569702 experiment 0.41159828119299 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660989 chr12:96660980 . . 0 hm6A_associated_SNPs_14494 0 0 1 3 96660976 96660997 mRNA hsa-miR-27b ELK3 miRanda miRanda
14034 chr12 96660980 96660980 1 + G T rs375758278 96660998 + 96660978 96661018 41 AGGACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT AGTACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT < 41bp 1 0.72234536790145 1 0.864368200302124 experiment 0.555309264197099 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660998 chr12:96660980 . . 0 hm6A_associated_SNPs_14495 0 0 1 3 96660976 96660997 mRNA hsa-miR-27a ELK3 miRanda miRanda
14034 chr12 96660980 96660980 1 + G T rs375758278 96660998 + 96660978 96661018 41 AGGACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT AGTACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT < 41bp 1 0.72234536790145 1 0.864368200302124 experiment 0.555309264197099 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660998 chr12:96660980 . . 0 hm6A_associated_SNPs_14495 0 0 1 3 96660974 96660995 mRNA hsa-miR-223 ELK3 miRanda miRanda
14034 chr12 96660980 96660980 1 + G T rs375758278 96660998 + 96660978 96661018 41 AGGACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT AGTACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT < 41bp 1 0.72234536790145 1 0.864368200302124 experiment 0.555309264197099 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660998 chr12:96660980 . . 0 hm6A_associated_SNPs_14495 0 0 1 3 96660976 96660997 mRNA hsa-miR-27b ELK3 miRanda miRanda
14034 chr12 96660985 96660985 1 + A G rs75958097 96660989 + 96660969 96661009 41 CCACAATTAAGGACTCATTAACTGATGAAACAAATTTGTCC CCACAATTAAGGACTCGTTAACTGATGAAACAAATTTGTCC < 41bp 1 0.739848330114068 1 0.930427849292755 experiment 0.520303339771863 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660989 chr12:96660985 . . 0 hm6A_associated_SNPs_14496 0 0 1 3 96660976 96660997 mRNA hsa-miR-27a ELK3 miRanda miRanda
14034 chr12 96660985 96660985 1 + A G rs75958097 96660989 + 96660969 96661009 41 CCACAATTAAGGACTCATTAACTGATGAAACAAATTTGTCC CCACAATTAAGGACTCGTTAACTGATGAAACAAATTTGTCC < 41bp 1 0.739848330114068 1 0.930427849292755 experiment 0.520303339771863 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660989 chr12:96660985 . . 0 hm6A_associated_SNPs_14496 0 0 1 3 96660974 96660995 mRNA hsa-miR-223 ELK3 miRanda miRanda
14034 chr12 96660985 96660985 1 + A G rs75958097 96660989 + 96660969 96661009 41 CCACAATTAAGGACTCATTAACTGATGAAACAAATTTGTCC CCACAATTAAGGACTCGTTAACTGATGAAACAAATTTGTCC < 41bp 1 0.739848330114068 1 0.930427849292755 experiment 0.520303339771863 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660989 chr12:96660985 . . 0 hm6A_associated_SNPs_14496 0 0 1 3 96660976 96660997 mRNA hsa-miR-27b ELK3 miRanda miRanda
14034 chr12 96660985 96660985 1 + A G rs75958097 96660998 + 96660978 96661018 41 AGGACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT AGGACTCGTTAACTGATGAAACAAATTTGTCCCCACGGGCT < 41bp 1 0.70445343980694 1 0.953441739082336 experiment 0.59109312038612 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660998 chr12:96660985 . . 0 hm6A_associated_SNPs_14497 0 0 1 3 96660976 96660997 mRNA hsa-miR-27a ELK3 miRanda miRanda
14034 chr12 96660985 96660985 1 + A G rs75958097 96660998 + 96660978 96661018 41 AGGACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT AGGACTCGTTAACTGATGAAACAAATTTGTCCCCACGGGCT < 41bp 1 0.70445343980694 1 0.953441739082336 experiment 0.59109312038612 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660998 chr12:96660985 . . 0 hm6A_associated_SNPs_14497 0 0 1 3 96660974 96660995 mRNA hsa-miR-223 ELK3 miRanda miRanda
14034 chr12 96660985 96660985 1 + A G rs75958097 96660998 + 96660978 96661018 41 AGGACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT AGGACTCGTTAACTGATGAAACAAATTTGTCCCCACGGGCT < 41bp 1 0.70445343980694 1 0.953441739082336 experiment 0.59109312038612 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660998 chr12:96660985 . . 0 hm6A_associated_SNPs_14497 0 0 1 3 96660976 96660997 mRNA hsa-miR-27b ELK3 miRanda miRanda
14034 chr12 96661014 96661014 1 + G A rs2302901 96660998 + 96660978 96661018 41 AGGACTCATTAACTGATGAAACAAATTTGTCCCCACGGGCT AGGACTCATTAACTGATGAAACAAATTTGTCCCCACAGGCT < 41bp 1 0.706599348138328 1 0.913422405719757 experiment 0.586801303723343 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96660998 chr12:96661014 . . 0 hm6A_associated_SNPs_14498 0 0 1 1 96660993 96661014 mRNA hsa-miR-491-5p ELK3 miRanda miRanda
14034 chr12 97346279 97346279 1 + T C rs116332402 97346295 + 97346275 97346315 41 TTGGTGTTTCTAAGCCATTGACTAATAAAACATAGGGTTGG TTGGCGTTTCTAAGCCATTGACTAATAAAACATAGGGTTGG < 41bp 1 0.283388530862754 1 0.738115429878235 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 NEDD1 ENSG00000139350 UTR3 Human protein_coding chr12:97346295 chr12:97346279 . . 0 hm6A_associated_SNPs_14500 0 0 1 2 97346271 97346293 mRNA hsa-miR-135a NEDD1 miRanda miRanda
14034 chr12 97346279 97346279 1 + T C rs116332402 97346295 + 97346275 97346315 41 TTGGTGTTTCTAAGCCATTGACTAATAAAACATAGGGTTGG TTGGCGTTTCTAAGCCATTGACTAATAAAACATAGGGTTGG < 41bp 1 0.283388530862754 1 0.738115429878235 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 NEDD1 ENSG00000139350 UTR3 Human protein_coding chr12:97346295 chr12:97346279 . . 0 hm6A_associated_SNPs_14500 0 0 1 2 97346271 97346293 mRNA hsa-miR-135b NEDD1 miRanda miRanda
14034 chr12 97346994 97346994 1 + A C rs79558706 97347007 + 97346987 97347027 41 TAAAAAAAAAAAAACAAAAAACAAACCTTTAGCTCACTAAC TAAAAAACAAAAAACAAAAAACAAACCTTTAGCTCACTAAC < 41bp 1 0.20015168894387 1 0.0364431440830231 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 8 NEDD1 ENSG00000139350 UTR3 Human protein_coding chr12:97347007 chr12:97346994 . . 0 hm6A_associated_SNPs_14502 0 0 1 1 97346987 97347007 mRNA hsa-miR-129-5p NEDD1 miRanda miRanda
14034 chr12 99127287 99127287 1 + T C rs543790149 99127298 + 99127278 99127318 41 ATACCTCATTGCAGCCTCAGACTCCTGGGTTCAAGCAATCC ATACCTCATCGCAGCCTCAGACTCCTGGGTTCAAGCAATCC < 41bp 1 0.130998681707456 1 0.000748425722122192 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 APAF1 ENSG00000120868 UTR3 Human protein_coding chr12:99127298 chr12:99127287 . . 0 hm6A_associated_SNPs_14511 0 0 0 1 99127276 99127296 mRNA hsa-miR-485-5p APAF1 miRanda miRanda
14034 chr12 100618000 100618000 1 + A C rs186423265 100618020 + 100618000 100618040 41 AAATTTAACGGCTTCACTGGACAGTTTTCCTTAGAAGGTAG CAATTTAACGGCTTCACTGGACAGTTTTCCTTAGAAGGTAG < 41bp 1 0.520534188788363 1 0.789963662624359 experiment 0.958931622423273 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 1 ACTR6 ENSG00000075089 UTR3 Human protein_coding chr12:100618020 chr12:100618000 . . 0 hm6A_associated_SNPs_14514 0 0 1 1 100617980 100618001 mRNA hsa-miR-218 ACTR6 miRanda miRanda
14034 chr12 102315904 102315904 1 + C T rs145841429 102315914 + 102315894 102315934 41 AAGAAAGGCCCAAGAGCGAGACAAGAAGAATGGAGAAGGGG AAGAAAGGCCTAAGAGCGAGACAAGAAGAATGGAGAAGGGG < 41bp 1 0.444004300679236 1 0.389457374811172 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 DRAM1 ENSG00000136048 UTR3 Human protein_coding chr12:102315914 chr12:102315904 . . 0 hm6A_associated_SNPs_14527 0 0 1 1 102315888 102315910 mRNA hsa-miR-330-5p DRAM1 miRanda miRanda
14034 chr12 102315925 102315925 1 + G A rs4764679 102315914 + 102315894 102315934 41 AAGAAAGGCCCAAGAGCGAGACAAGAAGAATGGAGAAGGGG AAGAAAGGCCCAAGAGCGAGACAAGAAGAATAGAGAAGGGG < 41bp 1 0.404241303354611 1 0.289221286773682 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 DRAM1 ENSG00000136048 UTR3 Human protein_coding chr12:102315914 chr12:102315925 . . 0 hm6A_associated_SNPs_14528 0 0 1 1 102315907 102315929 mRNA hsa-miR-136 DRAM1 miRanda miRanda
14034 chr12 102316963 102316963 1 + A G rs113706528 102316977 + 102316957 102316997 41 TGTAACACTGGAACTGAAAGACAGTGATGAAAGCTATGTCA TGTAACGCTGGAACTGAAAGACAGTGATGAAAGCTATGTCA < 41bp 1 0.681349761501862 1 0.0131328701972961 experiment 0.637300476996276 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 DRAM1 ENSG00000136048 UTR3 Human protein_coding chr12:102316977 chr12:102316963 . . 0 hm6A_associated_SNPs_14531 0 0 1 2 102316945 102316968 mRNA hsa-miR-199a-5p DRAM1 miRanda miRanda
14034 chr12 102316963 102316963 1 + A G rs113706528 102316977 + 102316957 102316997 41 TGTAACACTGGAACTGAAAGACAGTGATGAAAGCTATGTCA TGTAACGCTGGAACTGAAAGACAGTGATGAAAGCTATGTCA < 41bp 1 0.681349761501862 1 0.0131328701972961 experiment 0.637300476996276 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 DRAM1 ENSG00000136048 UTR3 Human protein_coding chr12:102316977 chr12:102316963 . . 0 hm6A_associated_SNPs_14531 0 0 1 2 102316946 102316968 mRNA hsa-miR-199b-5p DRAM1 miRanda miRanda
14034 chr12 104705129 104705129 1 + A C rs144186955 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCACGTCCTATGACTATGACCTTATCATCATTG < 41bp 1 0.460167027966685 1 0.873026371002197 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705129 nonsynonymous SNV 0.123 0 hm6A_associated_SNPs_14543 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705129 104705129 1 + A C rs144186955 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCACGTCCTATGACTATGACCTTATCATCATTG < 41bp 1 0.460167027966685 1 0.873026371002197 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705129 nonsynonymous SNV 0.123 0 hm6A_associated_SNPs_14543 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr12 104705129 104705129 1 + A C rs144186955 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCACGTCCTATGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.290630224483306 1 0.767823338508606 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705129 nonsynonymous SNV 0.123 0 hm6A_associated_SNPs_14544 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705129 104705129 1 + A C rs144186955 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCACGTCCTATGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.290630224483306 1 0.767823338508606 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705129 nonsynonymous SNV 0.123 0 hm6A_associated_SNPs_14544 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr12 104709559 104709559 1 + C T rs4964287 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTTGGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.643563869650404 1 0.837753057479858 experiment 0.712872260699192 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709559 synonymous SNV . 0 hm6A_associated_SNPs_14545 0 0 1 5 104709558 104709580 mRNA hsa-miR-181a TXNRD1 miRanda miRanda
14034 chr12 104709559 104709559 1 + C T rs4964287 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTTGGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.643563869650404 1 0.837753057479858 experiment 0.712872260699192 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709559 synonymous SNV . 0 hm6A_associated_SNPs_14545 0 0 1 5 104709558 104709580 mRNA hsa-miR-181b TXNRD1 miRanda miRanda
14034 chr12 104709559 104709559 1 + C T rs4964287 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTTGGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.643563869650404 1 0.837753057479858 experiment 0.712872260699192 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709559 synonymous SNV . 0 hm6A_associated_SNPs_14545 0 0 1 5 104709558 104709580 mRNA hsa-miR-181c TXNRD1 miRanda miRanda
14034 chr12 104709559 104709559 1 + C T rs4964287 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTTGGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.643563869650404 1 0.837753057479858 experiment 0.712872260699192 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709559 synonymous SNV . 0 hm6A_associated_SNPs_14545 0 0 1 5 104709555 104709576 mRNA hsa-miR-377 TXNRD1 miRanda miRanda
14034 chr12 104709559 104709559 1 + C T rs4964287 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTTGGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.643563869650404 1 0.837753057479858 experiment 0.712872260699192 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709559 synonymous SNV . 0 hm6A_associated_SNPs_14545 0 0 1 5 104709558 104709580 mRNA hsa-miR-181d TXNRD1 miRanda miRanda
14034 chr12 104709580 104709580 1 + G A rs374273996 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTAGGTTGC < 41bp 1 0.658022011474018 1 0.782496213912964 experiment 0.683955977051965 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709580 synonymous SNV . 0 hm6A_associated_SNPs_14546 0 0 1 4 104709558 104709580 mRNA hsa-miR-181a TXNRD1 miRanda miRanda
14034 chr12 104709580 104709580 1 + G A rs374273996 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTAGGTTGC < 41bp 1 0.658022011474018 1 0.782496213912964 experiment 0.683955977051965 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709580 synonymous SNV . 0 hm6A_associated_SNPs_14546 0 0 1 4 104709558 104709580 mRNA hsa-miR-181b TXNRD1 miRanda miRanda
14034 chr12 104709580 104709580 1 + G A rs374273996 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTAGGTTGC < 41bp 1 0.658022011474018 1 0.782496213912964 experiment 0.683955977051965 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709580 synonymous SNV . 0 hm6A_associated_SNPs_14546 0 0 1 4 104709558 104709580 mRNA hsa-miR-181c TXNRD1 miRanda miRanda
14034 chr12 104709580 104709580 1 + G A rs374273996 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTAGGTTGC < 41bp 1 0.658022011474018 1 0.782496213912964 experiment 0.683955977051965 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709580 synonymous SNV . 0 hm6A_associated_SNPs_14546 0 0 1 4 104709558 104709580 mRNA hsa-miR-181d TXNRD1 miRanda miRanda
14034 chr12 104743606 104743606 1 + T G rs34337366 104743624 + 104743604 104743644 41 TTTCTGGGCCACCTCAGGGAACCCATGCATCTGCCTGGCAT TTGCTGGGCCACCTCAGGGAACCCATGCATCTGCCTGGCAT < 41bp 1 0.156735825568294 1 0.0240623950958252 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 TXNRD1 ENSG00000198431 UTR3 Human protein_coding chr12:104743624 chr12:104743606 . . 0 hm6A_associated_SNPs_14549 0 0 1 2 104743599 104743623 mRNA hsa-miR-125b TXNRD1 miRanda miRanda
14034 chr12 104743606 104743606 1 + T G rs34337366 104743624 + 104743604 104743644 41 TTTCTGGGCCACCTCAGGGAACCCATGCATCTGCCTGGCAT TTGCTGGGCCACCTCAGGGAACCCATGCATCTGCCTGGCAT < 41bp 1 0.156735825568294 1 0.0240623950958252 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 TXNRD1 ENSG00000198431 UTR3 Human protein_coding chr12:104743624 chr12:104743606 . . 0 hm6A_associated_SNPs_14549 0 0 1 2 104743599 104743623 mRNA hsa-miR-125a-5p TXNRD1 miRanda miRanda
14034 chr12 105764575 105764575 1 + T C rs146323149 105764583 + 105764563 105764603 41 AATAGAAGGGAATTGGTTAAACAGTACACTTGTTTATGGAA AATAGAAGGGAACTGGTTAAACAGTACACTTGTTTATGGAA < 41bp 1 0.436870693248148 1 0.397958040237427 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764583 chr12:105764575 . . 0 hm6A_associated_SNPs_14560 0 0 1 1 105764570 105764592 mRNA hsa-miR-134 C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764980 105765003 mRNA hsa-miR-148a C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764983 105765002 mRNA hsa-miR-130a C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764981 105765003 mRNA hsa-miR-152 C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764980 105765002 mRNA hsa-miR-301a C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764981 105765002 mRNA hsa-miR-130b C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764963 105764984 mRNA hsa-miR-375 C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764980 105765003 mRNA hsa-miR-148b C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764978 105765002 mRNA hsa-miR-454 C12orf75 miRanda miRanda
14034 chr12 105764984 105764984 1 + T G rs6797 105764980 + 105764960 105765000 41 CAGAATTTCCTTTTTTAGGAACAATGTGTATTTCATTGCAC CAGAATTTCCTTTTTTAGGAACAAGGTGTATTTCATTGCAC < 41bp 1 0.364375596112982 1 0.0371267199516296 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 C12orf75 ENSG00000235162 UTR3 Human protein_coding chr12:105764980 chr12:105764984 . . 0 hm6A_associated_SNPs_14563 0 0 1 9 105764980 105765002 mRNA hsa-miR-301b C12orf75 miRanda miRanda
14034 chr12 106903565 106903565 1 + T A rs149535796 106903548 + 106903528 106903568 41 GAGAGATGCTGACCATGTGGACTGCAAGGCTGCTTGATTCA GAGAGATGCTGACCATGTGGACTGCAAGGCTGCTTGAATCA < 41bp 1 0.749666346014136 1 0.983329832553864 experiment 0.500667307971728 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 LOC100287944 ENSG00000013503 UTR3 Human protein_coding chr12:106903548 chr12:106903565 . . 0 hm6A_associated_SNPs_14565 0 0 1 1 106903564 106903589 mRNA hsa-miR-9 POLR3B miRanda miRanda
14034 chr12 107279804 107279804 1 + T C rs75731956 107279789 + 107279769 107279809 41 AGAGACCAGCTCTGACACAGACTAAAAGCATCACCTGCTCA AGAGACCAGCTCTGACACAGACTAAAAGCATCACCCGCTCA < 41bp 1 0.796871851316497 1 0.983596205711365 experiment 0.406256297367006 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 36 RIC8B ENSG00000111785 UTR3 Human protein_coding chr12:107279789 chr12:107279804 . . 0 hm6A_associated_SNPs_14573 0 0 1 3 107279794 107279809 mRNA hsa-miR-214 RIC8B miRanda miRanda
14034 chr12 107279804 107279804 1 + T C rs75731956 107279789 + 107279769 107279809 41 AGAGACCAGCTCTGACACAGACTAAAAGCATCACCTGCTCA AGAGACCAGCTCTGACACAGACTAAAAGCATCACCCGCTCA < 41bp 1 0.796871851316497 1 0.983596205711365 experiment 0.406256297367006 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 36 RIC8B ENSG00000111785 UTR3 Human protein_coding chr12:107279789 chr12:107279804 . . 0 hm6A_associated_SNPs_14573 0 0 1 3 107279785 107279806 mRNA hsa-miR-125a-3p RIC8B miRanda miRanda
14034 chr12 107279804 107279804 1 + T C rs75731956 107279789 + 107279769 107279809 41 AGAGACCAGCTCTGACACAGACTAAAAGCATCACCTGCTCA AGAGACCAGCTCTGACACAGACTAAAAGCATCACCCGCTCA < 41bp 1 0.796871851316497 1 0.983596205711365 experiment 0.406256297367006 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 36 RIC8B ENSG00000111785 UTR3 Human protein_coding chr12:107279789 chr12:107279804 . . 0 hm6A_associated_SNPs_14573 0 0 1 3 107279794 107279806 mRNA hsa-miR-125a-3p RIC8B miRanda miRanda
14034 chr12 107365344 107365344 1 + A G rs564691003 107365325 + 107365305 107365345 41 CTTTCATCTAAAAAGAAGAGACCAATACGAGCACAGTATAT CTTTCATCTAAAAAGAAGAGACCAATACGAGCACAGTATGT < 41bp 1 0.692762719466521 1 0.839357972145081 experiment 0.614474561066957 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 40 TMEM263 ENSG00000151135 UTR3 Human protein_coding chr12:107365325 chr12:107365344 . . 0 hm6A_associated_SNPs_14575 0 0 1 2 107365330 107365351 mRNA hsa-miR-205 C12orf23 miRanda miRanda
14034 chr12 107365344 107365344 1 + A G rs564691003 107365325 + 107365305 107365345 41 CTTTCATCTAAAAAGAAGAGACCAATACGAGCACAGTATAT CTTTCATCTAAAAAGAAGAGACCAATACGAGCACAGTATGT < 41bp 1 0.692762719466521 1 0.839357972145081 experiment 0.614474561066957 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 40 TMEM263 ENSG00000151135 UTR3 Human protein_coding chr12:107365325 chr12:107365344 . . 0 hm6A_associated_SNPs_14575 0 0 1 2 107365335 107365357 mRNA hsa-miR-539 C12orf23 miRanda miRanda
14034 chr12 108052846 108052846 1 + T C rs192063085 108052856 + 108052836 108052876 41 CCTAGATACATGCAGTAAAAACTAGGAGAATGACTTTTACC CCTAGATACACGCAGTAAAAACTAGGAGAATGACTTTTACC < 41bp 1 0.0313766167760388 1 0.473891586065292 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 11 BTBD11 ENSG00000151136 UTR3 Human protein_coding chr12:108052856 chr12:108052846 . . 0 hm6A_associated_SNPs_14583 0 0 0 1 108052831 108052852 mRNA hsa-miR-217 BTBD11 miRanda miRanda
14034 chr12 108962825 108962825 1 + G A rs569258315 108962831 + 108962811 108962851 41 TACTTGCTGTTCACGTTATGACTCTCATGCAAGCAAAATAC TACTTGCTGTTCACATTATGACTCTCATGCAAGCAAAATAC < 41bp 1 0.417330793334479 1 0.971367716789246 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962831 chr12:108962825 . . 0 hm6A_associated_SNPs_14586 0 0 1 2 108962819 108962842 mRNA hsa-miR-153 ISCU miRanda miRanda
14034 chr12 108962825 108962825 1 + G A rs569258315 108962831 + 108962811 108962851 41 TACTTGCTGTTCACGTTATGACTCTCATGCAAGCAAAATAC TACTTGCTGTTCACATTATGACTCTCATGCAAGCAAAATAC < 41bp 1 0.417330793334479 1 0.971367716789246 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962831 chr12:108962825 . . 0 hm6A_associated_SNPs_14586 0 0 1 2 108962804 108962825 mRNA hsa-miR-194 ISCU miRanda miRanda
14034 chr12 108962927 108962927 1 + G A rs2014227 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTAAATTGTGTGTATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0626540814084935 1 0.93493115901947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962927 . . 0 hm6A_associated_SNPs_14587 0 0 1 3 108962917 108962938 mRNA hsa-miR-362-3p ISCU miRanda miRanda
14034 chr12 108962927 108962927 1 + G A rs2014227 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTAAATTGTGTGTATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0626540814084935 1 0.93493115901947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962927 . . 0 hm6A_associated_SNPs_14587 0 0 1 3 108962917 108962938 mRNA hsa-miR-377 ISCU miRanda miRanda
14034 chr12 108962927 108962927 1 + G A rs2014227 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTAAATTGTGTGTATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0626540814084935 1 0.93493115901947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962927 . . 0 hm6A_associated_SNPs_14587 0 0 1 3 108962917 108962938 mRNA hsa-miR-329 ISCU miRanda miRanda
14034 chr12 108962929 108962929 1 + A T rs2014226 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTGATTTGTGTGTATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0658679358406441 1 0.922045469284058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962929 . . 0 hm6A_associated_SNPs_14588 0 0 1 3 108962917 108962938 mRNA hsa-miR-362-3p ISCU miRanda miRanda
14034 chr12 108962929 108962929 1 + A T rs2014226 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTGATTTGTGTGTATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0658679358406441 1 0.922045469284058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962929 . . 0 hm6A_associated_SNPs_14588 0 0 1 3 108962917 108962938 mRNA hsa-miR-377 ISCU miRanda miRanda
14034 chr12 108962929 108962929 1 + A T rs2014226 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTGATTTGTGTGTATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0658679358406441 1 0.922045469284058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962929 . . 0 hm6A_associated_SNPs_14588 0 0 1 3 108962917 108962938 mRNA hsa-miR-329 ISCU miRanda miRanda
14034 chr12 108962929 108962929 1 + A T rs2014226 108962949 + 108962929 108962969 41 ATTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT TTTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT < 41bp 1 0.168858141763876 1 0.95447826385498 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962949 chr12:108962929 . . 0 hm6A_associated_SNPs_14589 0 0 1 3 108962917 108962938 mRNA hsa-miR-362-3p ISCU miRanda miRanda
14034 chr12 108962929 108962929 1 + A T rs2014226 108962949 + 108962929 108962969 41 ATTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT TTTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT < 41bp 1 0.168858141763876 1 0.95447826385498 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962949 chr12:108962929 . . 0 hm6A_associated_SNPs_14589 0 0 1 3 108962917 108962938 mRNA hsa-miR-377 ISCU miRanda miRanda
14034 chr12 108962929 108962929 1 + A T rs2014226 108962949 + 108962929 108962969 41 ATTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT TTTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT < 41bp 1 0.168858141763876 1 0.95447826385498 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962949 chr12:108962929 . . 0 hm6A_associated_SNPs_14589 0 0 1 3 108962917 108962938 mRNA hsa-miR-329 ISCU miRanda miRanda
14034 chr12 108962936 108962936 1 + G A rs143165108 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTGAATTGTGTATATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0664779570852364 1 0.941106617450714 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962936 . . 0 hm6A_associated_SNPs_14590 0 0 1 3 108962917 108962938 mRNA hsa-miR-362-3p ISCU miRanda miRanda
14034 chr12 108962936 108962936 1 + G A rs143165108 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTGAATTGTGTATATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0664779570852364 1 0.941106617450714 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962936 . . 0 hm6A_associated_SNPs_14590 0 0 1 3 108962917 108962938 mRNA hsa-miR-377 ISCU miRanda miRanda
14034 chr12 108962936 108962936 1 + G A rs143165108 108962941 + 108962921 108962961 41 TATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATA TATTTTGAATTGTGTATATGACCTCAGAACTGAAATTGATA < 41bp 1 0.0664779570852364 1 0.941106617450714 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962941 chr12:108962936 . . 0 hm6A_associated_SNPs_14590 0 0 1 3 108962917 108962938 mRNA hsa-miR-329 ISCU miRanda miRanda
14034 chr12 108962936 108962936 1 + G A rs143165108 108962949 + 108962929 108962969 41 ATTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT ATTGTGTATATGACCTCAGAACTGAAATTGATAATGAAGTT < 41bp 1 0.172260147440339 1 0.963658154010773 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962949 chr12:108962936 . . 0 hm6A_associated_SNPs_14591 0 0 1 3 108962917 108962938 mRNA hsa-miR-362-3p ISCU miRanda miRanda
14034 chr12 108962936 108962936 1 + G A rs143165108 108962949 + 108962929 108962969 41 ATTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT ATTGTGTATATGACCTCAGAACTGAAATTGATAATGAAGTT < 41bp 1 0.172260147440339 1 0.963658154010773 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962949 chr12:108962936 . . 0 hm6A_associated_SNPs_14591 0 0 1 3 108962917 108962938 mRNA hsa-miR-377 ISCU miRanda miRanda
14034 chr12 108962936 108962936 1 + G A rs143165108 108962949 + 108962929 108962969 41 ATTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTT ATTGTGTATATGACCTCAGAACTGAAATTGATAATGAAGTT < 41bp 1 0.172260147440339 1 0.963658154010773 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ISCU ENSG00000136003 UTR3 Human protein_coding chr12:108962949 chr12:108962936 . . 0 hm6A_associated_SNPs_14591 0 0 1 3 108962917 108962938 mRNA hsa-miR-329 ISCU miRanda miRanda
14034 chr12 109973985 109973985 1 + G A rs540446508 109974004 + 109973984 109974024 41 TGTGCTCTACTTTGATGGAAACATGGCAAGGAATTTAAAGA TATGCTCTACTTTGATGGAAACATGGCAAGGAATTTAAAGA < 41bp 1 0.489935935863843 1 0.904354095458984 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control 2 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974004 chr12:109973985 . . 0 hm6A_associated_SNPs_14598 0 0 0 1 109973965 109973987 mRNA hsa-miR-362-3p UBE3B miRanda miRanda
14034 chr12 109974029 109974029 1 + A G rs1045258 109974024 + 109974004 109974044 41 ACATGGCAAGGAATTTAAAGACAGGAATGTATTAATATTAT ACATGGCAAGGAATTTAAAGACAGGGATGTATTAATATTAT < 41bp 1 0.671133331028969 1 0.911662697792053 experiment 0.657733337942062 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974024 chr12:109974029 . . 0 hm6A_associated_SNPs_14599 0 0 1 3 109974018 109974041 mRNA hsa-miR-374a UBE3B miRanda miRanda
14034 chr12 109974029 109974029 1 + A G rs1045258 109974024 + 109974004 109974044 41 ACATGGCAAGGAATTTAAAGACAGGAATGTATTAATATTAT ACATGGCAAGGAATTTAAAGACAGGGATGTATTAATATTAT < 41bp 1 0.671133331028969 1 0.911662697792053 experiment 0.657733337942062 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974024 chr12:109974029 . . 0 hm6A_associated_SNPs_14599 0 0 1 3 109974008 109974030 mRNA hsa-miR-339-5p UBE3B miRanda miRanda
14034 chr12 109974029 109974029 1 + A G rs1045258 109974024 + 109974004 109974044 41 ACATGGCAAGGAATTTAAAGACAGGAATGTATTAATATTAT ACATGGCAAGGAATTTAAAGACAGGGATGTATTAATATTAT < 41bp 1 0.671133331028969 1 0.911662697792053 experiment 0.657733337942062 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974024 chr12:109974029 . . 0 hm6A_associated_SNPs_14599 0 0 1 3 109974017 109974041 mRNA hsa-miR-374b UBE3B miRanda miRanda
14034 chr12 109974038 109974038 1 + A C rs79046795 109974024 + 109974004 109974044 41 ACATGGCAAGGAATTTAAAGACAGGAATGTATTAATATTAT ACATGGCAAGGAATTTAAAGACAGGAATGTATTACTATTAT < 41bp 1 0.651571204822112 1 0.925920486450195 experiment 0.696857590355775 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974024 chr12:109974038 . . 0 hm6A_associated_SNPs_14600 0 0 1 4 109974037 109974056 mRNA hsa-miR-362-3p UBE3B miRanda miRanda
14034 chr12 109974038 109974038 1 + A C rs79046795 109974024 + 109974004 109974044 41 ACATGGCAAGGAATTTAAAGACAGGAATGTATTAATATTAT ACATGGCAAGGAATTTAAAGACAGGAATGTATTACTATTAT < 41bp 1 0.651571204822112 1 0.925920486450195 experiment 0.696857590355775 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974024 chr12:109974038 . . 0 hm6A_associated_SNPs_14600 0 0 1 4 109974018 109974041 mRNA hsa-miR-374a UBE3B miRanda miRanda
14034 chr12 109974038 109974038 1 + A C rs79046795 109974024 + 109974004 109974044 41 ACATGGCAAGGAATTTAAAGACAGGAATGTATTAATATTAT ACATGGCAAGGAATTTAAAGACAGGAATGTATTACTATTAT < 41bp 1 0.651571204822112 1 0.925920486450195 experiment 0.696857590355775 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974024 chr12:109974038 . . 0 hm6A_associated_SNPs_14600 0 0 1 4 109974037 109974056 mRNA hsa-miR-329 UBE3B miRanda miRanda
14034 chr12 109974038 109974038 1 + A C rs79046795 109974024 + 109974004 109974044 41 ACATGGCAAGGAATTTAAAGACAGGAATGTATTAATATTAT ACATGGCAAGGAATTTAAAGACAGGAATGTATTACTATTAT < 41bp 1 0.651571204822112 1 0.925920486450195 experiment 0.696857590355775 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 UBE3B ENSG00000151148 UTR3 Human protein_coding chr12:109974024 chr12:109974038 . . 0 hm6A_associated_SNPs_14600 0 0 1 4 109974017 109974041 mRNA hsa-miR-374b UBE3B miRanda miRanda
14034 chr12 110029057 110029057 1 + C A rs34975996 110029073 + 110029053 110029093 41 AGATCGTGGCCCCCCTCCTGACCTCAATAGATGCCATCTCC AGATAGTGGCCCCCCTCCTGACCTCAATAGATGCCATCTCC < 41bp 1 0.143293683519267 1 0.0459640324115753 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 MVK ENSG00000110921 CDS Human protein_coding chr12:110029073 chr12:110029057 synonymous SNV . 0 hm6A_associated_SNPs_14604 2 0 1 1 110029056 110029078 mRNA hsa-let-7e MVK miRanda miRanda
14034 chr12 110355431 110355431 1 + C G rs117176903 110355429 + 110355409 110355449 41 GATGAGTCTCAGAACCACAGACCGGCCAGAAATCTCTCCCA GATGAGTCTCAGAACCACAGACGGGCCAGAAATCTCTCCCA Direct Loss 1 0.181617710527813 1 0.684857964515686 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 TCHP ENSG00000139437 UTR3 Human protein_coding chr12:110355429 chr12:110355431 . . 0 hm6A_associated_SNPs_14609 0 0 1 1 110355424 110355448 mRNA hsa-miR-185 TCHP miRanda miRanda
14034 chr12 110784652 110784652 1 + T C rs535603417 110784658 + 110784638 110784678 41 TGTGTGGTTTTTTTTCTAAAACTAAATAGCATGTATTGTGT TGTGTGGTTTTTTTCCTAAAACTAAATAGCATGTATTGTGT < 41bp 1 0.316706323142108 1 0.698309421539307 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110784658 chr12:110784652 . . 0 hm6A_associated_SNPs_14618 0 0 1 1 110784649 110784673 mRNA hsa-miR-155 ATP2A2 miRanda miRanda
14034 chr12 110788783 110788783 1 + A C rs115224394 110788797 + 110788777 110788817 41 TTTATCACTGCGCATGTTTGACTTTAGACTGTAAATAGAGA TTTATCCCTGCGCATGTTTGACTTTAGACTGTAAATAGAGA < 41bp 1 0.195982980420739 1 0.11918580532074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110788797 chr12:110788783 . . 0 hm6A_associated_SNPs_14620 0 0 1 4 110788769 110788789 mRNA hsa-miR-34a ATP2A2 miRanda miRanda
14034 chr12 110788783 110788783 1 + A C rs115224394 110788797 + 110788777 110788817 41 TTTATCACTGCGCATGTTTGACTTTAGACTGTAAATAGAGA TTTATCCCTGCGCATGTTTGACTTTAGACTGTAAATAGAGA < 41bp 1 0.195982980420739 1 0.11918580532074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110788797 chr12:110788783 . . 0 hm6A_associated_SNPs_14620 0 0 1 4 110788766 110788789 mRNA hsa-miR-34c-5p ATP2A2 miRanda miRanda
14034 chr12 110788783 110788783 1 + A C rs115224394 110788797 + 110788777 110788817 41 TTTATCACTGCGCATGTTTGACTTTAGACTGTAAATAGAGA TTTATCCCTGCGCATGTTTGACTTTAGACTGTAAATAGAGA < 41bp 1 0.195982980420739 1 0.11918580532074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110788797 chr12:110788783 . . 0 hm6A_associated_SNPs_14620 0 0 1 4 110788761 110788789 mRNA hsa-miR-449a ATP2A2 miRanda miRanda
14034 chr12 110788783 110788783 1 + A C rs115224394 110788797 + 110788777 110788817 41 TTTATCACTGCGCATGTTTGACTTTAGACTGTAAATAGAGA TTTATCCCTGCGCATGTTTGACTTTAGACTGTAAATAGAGA < 41bp 1 0.195982980420739 1 0.11918580532074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110788797 chr12:110788783 . . 0 hm6A_associated_SNPs_14620 0 0 1 4 110788761 110788789 mRNA hsa-miR-449b ATP2A2 miRanda miRanda
14034 chr12 112460215 112460215 1 + A G rs147970597 112460230 + 112460210 112460250 41 CTTGAAGCAGGGGCAAGATAACCTCTCAAGTGTGAAGGAGA CTTGAGGCAGGGGCAAGATAACCTCTCAAGTGTGAAGGAGA < 41bp 1 0.396610886391841 1 0.954413414001465 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460230 chr12:112460215 nonsynonymous SNV 0.803 0 hm6A_associated_SNPs_14629 0 0 1 1 112460215 112460234 mRNA hsa-miR-154 ERP29 miRanda miRanda
14034 chr12 112944397 112944397 1 + C T rs138246203 112944412 + 112944392 112944432 41 TTGGTCGCCAAATGTTGCTGACAAACTTATCCCAAAACTTT TTGGTTGCCAAATGTTGCTGACAAACTTATCCCAAAACTTT < 41bp 1 0.444562582849144 1 0.763151288032532 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 PTPN11 ENSG00000179295 UTR3 Human protein_coding chr12:112944412 chr12:112944397 . . 0 hm6A_associated_SNPs_14636 0 0 1 2 112944379 112944403 mRNA hsa-miR-96 PTPN11 miRanda miRanda
14034 chr12 112944397 112944397 1 + C T rs138246203 112944412 + 112944392 112944432 41 TTGGTCGCCAAATGTTGCTGACAAACTTATCCCAAAACTTT TTGGTTGCCAAATGTTGCTGACAAACTTATCCCAAAACTTT < 41bp 1 0.444562582849144 1 0.763151288032532 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 PTPN11 ENSG00000179295 UTR3 Human protein_coding chr12:112944412 chr12:112944397 . . 0 hm6A_associated_SNPs_14636 0 0 1 2 112944383 112944403 mRNA hsa-miR-1271 PTPN11 miRanda miRanda
14034 chr12 113355583 113355583 1 + T G rs111604680 113355564 + 113355544 113355584 41 CCCTCTCCATGAAGCTTGAGACATATAGCTGGAGACCATTC CCCTCTCCATGAAGCTTGAGACATATAGCTGGAGACCATGC < 41bp 1 0.150511048484647 1 0.0349834561347961 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 OAS1 ENSG00000257452 ncRNA_intronic Human antisense chr12:113355564 chr12:113355583 . . 0 hm6A_associated_SNPs_14640 0 0 0 1 113355565 113355588 mRNA hsa-miR-186 OAS1 miRanda miRanda
14034 chr12 113355583 113355583 1 + T G rs111604680 113355595 + 113355575 113355615 41 GAGACCATTCTTTCCAAAGAACTTACCTCTTGCCAAAGGCC GAGACCATGCTTTCCAAAGAACTTACCTCTTGCCAAAGGCC < 41bp 1 0.10525106207127 1 0.433122873306274 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 OAS1 ENSG00000257452 ncRNA_intronic Human antisense chr12:113355595 chr12:113355583 . . 0 hm6A_associated_SNPs_14641 0 0 0 1 113355565 113355588 mRNA hsa-miR-186 OAS1 miRanda miRanda
14034 chr12 113355584 113355584 1 + C T rs551698229 113355564 + 113355544 113355584 41 CCCTCTCCATGAAGCTTGAGACATATAGCTGGAGACCATTC CCCTCTCCATGAAGCTTGAGACATATAGCTGGAGACCATTT < 41bp 1 0.138262654521195 1 0.0297331213951111 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 OAS1 ENSG00000257452 ncRNA_intronic Human antisense chr12:113355564 chr12:113355584 . . 0 hm6A_associated_SNPs_14642 0 0 0 1 113355565 113355588 mRNA hsa-miR-186 OAS1 miRanda miRanda
14034 chr12 113355584 113355584 1 + C T rs551698229 113355595 + 113355575 113355615 41 GAGACCATTCTTTCCAAAGAACTTACCTCTTGCCAAAGGCC GAGACCATTTTTTCCAAAGAACTTACCTCTTGCCAAAGGCC < 41bp 1 0.0868800552030159 1 0.341808646917343 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 OAS1 ENSG00000257452 ncRNA_intronic Human antisense chr12:113355595 chr12:113355584 . . 0 hm6A_associated_SNPs_14643 0 0 0 1 113355565 113355588 mRNA hsa-miR-186 OAS1 miRanda miRanda
14034 chr12 113355601 113355601 1 + C G rs368680661 113355595 + 113355575 113355615 41 GAGACCATTCTTTCCAAAGAACTTACCTCTTGCCAAAGGCC GAGACCATTCTTTCCAAAGAACTTACGTCTTGCCAAAGGCC < 41bp 1 0.0929132620333338 1 0.39843824505806 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 OAS1 ENSG00000257452 ncRNA_intronic Human antisense chr12:113355595 chr12:113355601 . . 0 hm6A_associated_SNPs_14644 0 0 0 2 113355589 113355609 mRNA hsa-miR-31 OAS1 miRanda miRanda
14034 chr12 113355601 113355601 1 + C G rs368680661 113355595 + 113355575 113355615 41 GAGACCATTCTTTCCAAAGAACTTACCTCTTGCCAAAGGCC GAGACCATTCTTTCCAAAGAACTTACGTCTTGCCAAAGGCC < 41bp 1 0.0929132620333338 1 0.39843824505806 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 OAS1 ENSG00000257452 ncRNA_intronic Human antisense chr12:113355595 chr12:113355601 . . 0 hm6A_associated_SNPs_14644 0 0 0 2 113355587 113355611 mRNA hsa-miR-182 OAS1 miRanda miRanda
14034 chr12 113447103 113447103 1 + A G rs916973 113447090 + 113447070 113447110 41 TGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACT TGTCTGGAAATAGCCCTGTAACAGGCTTGAATCGAAGAACT < 41bp 1 0.64629682452158 1 0.803995072841644 experiment 0.70740635095684 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 OAS2 ENSG00000257452 ncRNA_intronic Human antisense chr12:113447090 chr12:113447103 . . 0 hm6A_associated_SNPs_14646 0 0 0 1 113447101 113447124 mRNA hsa-miR-139-5p OAS2 miRanda miRanda
14034 chr12 117387465 117387465 1 + A G rs36021180 117387463 + 117387443 117387483 41 CGAGCTGGAGCATGTTCCTGACACAGTTTTGTGTGATGTGC CGAGCTGGAGCATGTTCCTGACGCAGTTTTGTGTGATGTGC Direct Loss 1 0.195846547613851 1 0.00525948405265808 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 23 FBXW8 ENSG00000174989 CDS Human protein_coding chr12:117387463 chr12:117387465 nonsynonymous SNV 0.337 0 hm6A_associated_SNPs_14654 0 0 1 1 117387458 117387479 mRNA hsa-miR-377 FBXW8 miRanda miRanda
14034 chr12 118469131 118469131 1 + G A rs192795722 118469140 + 118469120 118469160 41 CAGTGATGGGAGAACAGAGGACAGTTCCAGGATAAACTGCT CAGTGATGGGAAAACAGAGGACAGTTCCAGGATAAACTGCT < 41bp 1 0.765372122436082 1 0.948698997497559 experiment 0.469255755127837 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 RFC5 ENSG00000111445 UTR3 Human protein_coding chr12:118469140 chr12:118469131 . . 0 hm6A_associated_SNPs_14658 0 0 1 1 118469128 118469148 mRNA hsa-miR-613 RFC5 miRanda miRanda
14034 chr12 118469542 118469542 1 + A G rs5745892 118469560 + 118469540 118469580 41 TTAATGGACGTCTGGCCGAAACTATTATACTTTTATAAGAT TTGATGGACGTCTGGCCGAAACTATTATACTTTTATAAGAT < 41bp 1 0.179858266456414 1 0.709674954414368 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 RFC5 ENSG00000111445 UTR3 Human protein_coding chr12:118469560 chr12:118469542 . . 0 hm6A_associated_SNPs_14659 0 0 1 1 118469520 118469542 mRNA hsa-miR-141 RFC5 miRanda miRanda
14034 chr12 120118591 120118591 1 + A G rs189523939 120118596 + 120118576 120118616 41 TGTTGAGGCCTGGCTATGGAACTAAATACAGTGTTGGTCTT TGTTGAGGCCTGGCTGTGGAACTAAATACAGTGTTGGTCTT < 41bp 1 0.475653142863764 1 0.833286881446838 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 16 PRKAB1 ENSG00000111725 UTR3 Human protein_coding chr12:120118596 chr12:120118591 . . 0 hm6A_associated_SNPs_14675 0 0 1 2 120118590 120118611 mRNA hsa-miR-141 PRKAB1 miRanda miRanda
14034 chr12 120118591 120118591 1 + A G rs189523939 120118596 + 120118576 120118616 41 TGTTGAGGCCTGGCTATGGAACTAAATACAGTGTTGGTCTT TGTTGAGGCCTGGCTGTGGAACTAAATACAGTGTTGGTCTT < 41bp 1 0.475653142863764 1 0.833286881446838 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 16 PRKAB1 ENSG00000111725 UTR3 Human protein_coding chr12:120118596 chr12:120118591 . . 0 hm6A_associated_SNPs_14675 0 0 1 2 120118590 120118611 mRNA hsa-miR-200a PRKAB1 miRanda miRanda
14034 chr12 120899521 120899521 1 - G C rs114832191 120899522 - 120899502 120899542 41 GGAGATCAACAGTTACTGTGACTGAGTCGGCCCATTCTGTT GGAGATCAACAGTTACTGTGAGTGAGTCGGCCCATTCTGTT Direct Loss 1 0.360692008510858 1 0.017063319683075 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 GATC;SRSF9 ENSG00000111786 UTR3 Human protein_coding chr12:120899522 chr12:120899521 . . 0 hm6A_associated_SNPs_14692 0 0 1 5 120899521 120899542 mRNA hsa-miR-26b SFRS9 miRanda miRanda
14034 chr12 120899521 120899521 1 - G C rs114832191 120899522 - 120899502 120899542 41 GGAGATCAACAGTTACTGTGACTGAGTCGGCCCATTCTGTT GGAGATCAACAGTTACTGTGAGTGAGTCGGCCCATTCTGTT Direct Loss 1 0.360692008510858 1 0.017063319683075 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 GATC;SRSF9 ENSG00000111786 UTR3 Human protein_coding chr12:120899522 chr12:120899521 . . 0 hm6A_associated_SNPs_14692 0 0 1 5 120899521 120899539 mRNA hsa-miR-27a SFRS9 miRanda miRanda
14034 chr12 120899521 120899521 1 - G C rs114832191 120899522 - 120899502 120899542 41 GGAGATCAACAGTTACTGTGACTGAGTCGGCCCATTCTGTT GGAGATCAACAGTTACTGTGAGTGAGTCGGCCCATTCTGTT Direct Loss 1 0.360692008510858 1 0.017063319683075 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 GATC;SRSF9 ENSG00000111786 UTR3 Human protein_coding chr12:120899522 chr12:120899521 . . 0 hm6A_associated_SNPs_14692 0 0 1 5 120899498 120899523 mRNA hsa-miR-30d SFRS9 miRanda miRanda
14034 chr12 120899521 120899521 1 - G C rs114832191 120899522 - 120899502 120899542 41 GGAGATCAACAGTTACTGTGACTGAGTCGGCCCATTCTGTT GGAGATCAACAGTTACTGTGAGTGAGTCGGCCCATTCTGTT Direct Loss 1 0.360692008510858 1 0.017063319683075 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 GATC;SRSF9 ENSG00000111786 UTR3 Human protein_coding chr12:120899522 chr12:120899521 . . 0 hm6A_associated_SNPs_14692 0 0 1 5 120899521 120899542 mRNA hsa-miR-27b SFRS9 miRanda miRanda
14034 chr12 120899521 120899521 1 - G C rs114832191 120899522 - 120899502 120899542 41 GGAGATCAACAGTTACTGTGACTGAGTCGGCCCATTCTGTT GGAGATCAACAGTTACTGTGAGTGAGTCGGCCCATTCTGTT Direct Loss 1 0.360692008510858 1 0.017063319683075 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 GATC;SRSF9 ENSG00000111786 UTR3 Human protein_coding chr12:120899522 chr12:120899521 . . 0 hm6A_associated_SNPs_14692 0 0 1 5 120899498 120899523 mRNA hsa-miR-30b SFRS9 miRanda miRanda
14034 chr12 121861424 121861424 1 + C A rs28557279 121861419 + 121861399 121861439 41 GACAGTCACCCCCAAACTTGACCCCCAACATTTCAATGCAC GACAGTCACCCCCAAACTTGACCCCAAACATTTCAATGCAC < 41bp 1 0.775160043281377 1 0.99279522895813 experiment 0.449679913437247 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 RNF34 ENSG00000170633 UTR3 Human protein_coding chr12:121861419 chr12:121861424 . . 0 hm6A_associated_SNPs_14721 0 0 1 3 121861417 121861439 mRNA hsa-miR-33a RNF34 miRanda miRanda
14034 chr12 121861424 121861424 1 + C A rs28557279 121861419 + 121861399 121861439 41 GACAGTCACCCCCAAACTTGACCCCCAACATTTCAATGCAC GACAGTCACCCCCAAACTTGACCCCAAACATTTCAATGCAC < 41bp 1 0.775160043281377 1 0.99279522895813 experiment 0.449679913437247 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 RNF34 ENSG00000170633 UTR3 Human protein_coding chr12:121861419 chr12:121861424 . . 0 hm6A_associated_SNPs_14721 0 0 1 3 121861413 121861434 mRNA hsa-miR-203 RNF34 miRanda miRanda
14034 chr12 121861424 121861424 1 + C A rs28557279 121861419 + 121861399 121861439 41 GACAGTCACCCCCAAACTTGACCCCCAACATTTCAATGCAC GACAGTCACCCCCAAACTTGACCCCAAACATTTCAATGCAC < 41bp 1 0.775160043281377 1 0.99279522895813 experiment 0.449679913437247 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 RNF34 ENSG00000170633 UTR3 Human protein_coding chr12:121861419 chr12:121861424 . . 0 hm6A_associated_SNPs_14721 0 0 1 3 121861418 121861439 mRNA hsa-miR-33b RNF34 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079688 122079710 mRNA hsa-miR-17 ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079688 122079710 mRNA hsa-miR-20a ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079688 122079710 mRNA hsa-miR-93 ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079688 122079710 mRNA hsa-miR-106a ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079687 122079708 mRNA hsa-miR-130a ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079690 122079710 mRNA hsa-miR-106b ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079687 122079708 mRNA hsa-miR-130b ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079688 122079710 mRNA hsa-miR-20b ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079689 122079710 mRNA hsa-miR-519d ORAI1 miRanda miRanda
14034 chr12 122079706 122079706 1 + C T rs112873263 122079713 + 122079693 122079733 41 AGAAATTTCTGCACTTTGAAACTGTCCTCTAAGAGAATAAG AGAAATTTCTGCATTTTGAAACTGTCCTCTAAGAGAATAAG < 41bp 1 0.650541814278069 1 0.936533331871033 experiment 0.698916371443862 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 ORAI1 ENSG00000182500 UTR3 Human other chr12:122079713 chr12:122079706 . . 0 hm6A_associated_SNPs_14727 0 0 0 10 122079683 122079708 mRNA hsa-miR-454 ORAI1 miRanda miRanda
14034 chr12 123254699 123254699 1 + C A rs1975761 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCAGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.380811290861157 1 0.718655705451965 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 4 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254699 . . 0 hm6A_associated_SNPs_14761 0 0 1 4 123254688 123254711 mRNA hsa-miR-302a DENR miRanda miRanda
14034 chr12 123254699 123254699 1 + C A rs1975761 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCAGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.380811290861157 1 0.718655705451965 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 4 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254699 . . 0 hm6A_associated_SNPs_14761 0 0 1 4 123254688 123254711 mRNA hsa-miR-302b DENR miRanda miRanda
14034 chr12 123254699 123254699 1 + C A rs1975761 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCAGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.380811290861157 1 0.718655705451965 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 4 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254699 . . 0 hm6A_associated_SNPs_14761 0 0 1 4 123254688 123254711 mRNA hsa-miR-302c DENR miRanda miRanda
14034 chr12 123254699 123254699 1 + C A rs1975761 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCAGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.380811290861157 1 0.718655705451965 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 4 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254699 . . 0 hm6A_associated_SNPs_14761 0 0 1 4 123254688 123254711 mRNA hsa-miR-302d DENR miRanda miRanda
14034 chr12 123254704 123254704 1 + G A rs141683958 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCCGTAAACCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.374693389019253 1 0.668516099452972 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254704 . . 0 hm6A_associated_SNPs_14762 0 0 1 4 123254688 123254711 mRNA hsa-miR-302a DENR miRanda miRanda
14034 chr12 123254704 123254704 1 + G A rs141683958 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCCGTAAACCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.374693389019253 1 0.668516099452972 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254704 . . 0 hm6A_associated_SNPs_14762 0 0 1 4 123254688 123254711 mRNA hsa-miR-302b DENR miRanda miRanda
14034 chr12 123254704 123254704 1 + G A rs141683958 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCCGTAAACCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.374693389019253 1 0.668516099452972 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254704 . . 0 hm6A_associated_SNPs_14762 0 0 1 4 123254688 123254711 mRNA hsa-miR-302c DENR miRanda miRanda
14034 chr12 123254704 123254704 1 + G A rs141683958 123254716 + 123254696 123254736 41 ACCCGTAAGCCACTTCTTTGACATTAGAAGACATTAGAAGA ACCCGTAAACCACTTCTTTGACATTAGAAGACATTAGAAGA < 41bp 1 0.374693389019253 1 0.668516099452972 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254716 chr12:123254704 . . 0 hm6A_associated_SNPs_14762 0 0 1 4 123254688 123254711 mRNA hsa-miR-302d DENR miRanda miRanda
14034 chr12 123741706 123741706 1 + C A rs11554169 123741693 + 123741673 123741713 41 AAAAGAAATATTTTTGATGAACTTAAAAGACAACAAATTTA AAAAGAAATATTTTTGATGAACTTAAAAGACAAAAAATTTA < 41bp 1 0.723857401043833 1 0.986048102378845 experiment 0.552285197912334 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123741693 chr12:123741706 . . 0 hm6A_associated_SNPs_14769 1 0 1 1 123741684 123741709 mRNA hsa-miR-599 C12orf65 miRanda miRanda
14034 chr12 123741706 123741706 1 + C A rs11554169 123741702 + 123741682 123741722 41 ATTTTTGATGAACTTAAAAGACAACAAATTTATTTAAATGG ATTTTTGATGAACTTAAAAGACAAAAAATTTATTTAAATGG < 41bp 1 0.772351106414966 1 0.954982161521912 experiment 0.455297787170068 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 25 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123741702 chr12:123741706 . . 0 hm6A_associated_SNPs_14770 1 0 1 1 123741684 123741709 mRNA hsa-miR-599 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742084 123742105 mRNA hsa-miR-25 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742084 123742105 mRNA hsa-miR-32 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742088 123742109 mRNA hsa-miR-33a C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742084 123742105 mRNA hsa-miR-92a C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742084 123742105 mRNA hsa-miR-363 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742086 123742105 mRNA hsa-miR-367 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742084 123742105 mRNA hsa-miR-92b C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742088 + 123742068 123742108 41 CATCTCAAAAAAAAAATAAAACTAGTTCAAGTGCAATGACA CATCTCAAAAAAAAAATAAAACTAGGTCAAGTGCAATGACA < 41bp 1 0.603771329982802 1 0.599020540714264 experiment 0.792457340034396 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742088 chr12:123742093 . . 0 hm6A_associated_SNPs_14772 1 0 0 8 123742089 123742109 mRNA hsa-miR-33b C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742084 123742105 mRNA hsa-miR-25 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742084 123742105 mRNA hsa-miR-32 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742088 123742109 mRNA hsa-miR-33a C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742084 123742105 mRNA hsa-miR-92a C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742084 123742105 mRNA hsa-miR-363 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742086 123742105 mRNA hsa-miR-367 C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742084 123742105 mRNA hsa-miR-92b C12orf65 miRanda miRanda
14034 chr12 123742093 123742093 1 + T G rs1533703 123742106 + 123742086 123742126 41 AAACTAGTTCAAGTGCAATGACACACGCCTATAATCCCAGC AAACTAGGTCAAGTGCAATGACACACGCCTATAATCCCAGC < 41bp 1 0.556458408952606 1 0.39596751332283 experiment 0.887083182094789 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742106 chr12:123742093 . . 0 hm6A_associated_SNPs_14773 1 0 0 8 123742089 123742109 mRNA hsa-miR-33b C12orf65 miRanda miRanda
14034 chr12 123742225 123742225 1 + G A rs565651935 123742235 + 123742215 123742255 41 ACTTGTTCTTGTGTGACAGAACAAGACCCTGTCTCTAAAAA ACTTGTTCTTATGTGACAGAACAAGACCCTGTCTCTAAAAA < 41bp 1 0.579073733115324 1 0.290175974369049 experiment 0.841852533769353 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 11 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742235 chr12:123742225 . . 0 hm6A_associated_SNPs_14774 0 0 1 1 123742210 123742231 mRNA hsa-miR-377 C12orf65 miRanda miRanda
14034 chr12 123742225 123742225 1 + G A rs565651935 123742240 + 123742220 123742260 41 TTCTTGTGTGACAGAACAAGACCCTGTCTCTAAAAAATAAG TTCTTATGTGACAGAACAAGACCCTGTCTCTAAAAAATAAG < 41bp 1 0.309247277328646 1 0.272853910923004 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123742240 chr12:123742225 . . 0 hm6A_associated_SNPs_14775 0 0 1 1 123742210 123742231 mRNA hsa-miR-377 C12orf65 miRanda miRanda
14034 chr12 124081779 124081779 1 + G T rs7965292 124081773 + 124081753 124081793 41 CCTAATGGCAGAGCTCTCTGACTTGGGTGTATGCTGCCAGG CCTAATGGCAGAGCTCTCTGACTTGGTTGTATGCTGCCAGG < 41bp 1 0.329710661183535 1 0.465138345956802 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 TMED2 ENSG00000086598 UTR3 Human protein_coding chr12:124081773 chr12:124081779 . . 0 hm6A_associated_SNPs_14780 0 0 1 2 124081767 124081790 mRNA hsa-miR-103 TMED2 miRanda miRanda
14034 chr12 124081779 124081779 1 + G T rs7965292 124081773 + 124081753 124081793 41 CCTAATGGCAGAGCTCTCTGACTTGGGTGTATGCTGCCAGG CCTAATGGCAGAGCTCTCTGACTTGGTTGTATGCTGCCAGG < 41bp 1 0.329710661183535 1 0.465138345956802 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 TMED2 ENSG00000086598 UTR3 Human protein_coding chr12:124081773 chr12:124081779 . . 0 hm6A_associated_SNPs_14780 0 0 1 2 124081767 124081790 mRNA hsa-miR-107 TMED2 miRanda miRanda
14034 chr12 124081898 124081898 1 + C T rs578067164 124081886 + 124081866 124081906 41 TTTTTACATTGTACCTTAGGACTCAGTCATCTCCACTTAAA TTTTTACATTGTACCTTAGGACTCAGTCATCTTCACTTAAA < 41bp 1 0.504990785527407 1 0.77387273311615 experiment 0.990018428945186 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 TMED2 ENSG00000086598 UTR3 Human protein_coding chr12:124081886 chr12:124081898 . . 0 hm6A_associated_SNPs_14782 0 0 1 2 124081879 124081899 mRNA hsa-miR-143 TMED2 miRanda miRanda
14034 chr12 124081898 124081898 1 + C T rs578067164 124081886 + 124081866 124081906 41 TTTTTACATTGTACCTTAGGACTCAGTCATCTCCACTTAAA TTTTTACATTGTACCTTAGGACTCAGTCATCTTCACTTAAA < 41bp 1 0.504990785527407 1 0.77387273311615 experiment 0.990018428945186 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 TMED2 ENSG00000086598 UTR3 Human protein_coding chr12:124081886 chr12:124081898 . . 0 hm6A_associated_SNPs_14782 0 0 1 2 124081897 124081919 mRNA hsa-miR-599 TMED2 miRanda miRanda
14034 chr12 124105115 124105115 1 + C T rs7970984 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGATATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.105924934148788 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105115 . . 0 hm6A_associated_SNPs_14783 0 0 1 4 124105111 124105132 mRNA hsa-miR-374a DDX55 miRanda miRanda
14034 chr12 124105115 124105115 1 + C T rs7970984 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGATATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.105924934148788 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105115 . . 0 hm6A_associated_SNPs_14783 0 0 1 4 124105113 124105133 mRNA hsa-miR-410 DDX55 miRanda miRanda
14034 chr12 124105115 124105115 1 + C T rs7970984 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGATATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.105924934148788 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105115 . . 0 hm6A_associated_SNPs_14783 0 0 1 4 124105110 124105129 mRNA hsa-miR-190b DDX55 miRanda miRanda
14034 chr12 124105115 124105115 1 + C T rs7970984 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGATATATGTACATATTATATAT Direct Loss 1 0.211909449044627 1 0.105924934148788 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105115 . . 0 hm6A_associated_SNPs_14783 0 0 1 4 124105111 124105132 mRNA hsa-miR-374b DDX55 miRanda miRanda
14034 chr12 124105116 124105116 1 + A T rs188947506 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGACTTATGTACATATTATATAT < 41bp 1 0.172865742701311 1 0.779928803443909 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105116 . . 0 hm6A_associated_SNPs_14784 0 0 1 4 124105111 124105132 mRNA hsa-miR-374a DDX55 miRanda miRanda
14034 chr12 124105116 124105116 1 + A T rs188947506 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGACTTATGTACATATTATATAT < 41bp 1 0.172865742701311 1 0.779928803443909 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105116 . . 0 hm6A_associated_SNPs_14784 0 0 1 4 124105113 124105133 mRNA hsa-miR-410 DDX55 miRanda miRanda
14034 chr12 124105116 124105116 1 + A T rs188947506 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGACTTATGTACATATTATATAT < 41bp 1 0.172865742701311 1 0.779928803443909 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105116 . . 0 hm6A_associated_SNPs_14784 0 0 1 4 124105110 124105129 mRNA hsa-miR-190b DDX55 miRanda miRanda
14034 chr12 124105116 124105116 1 + A T rs188947506 124105114 + 124105094 124105134 41 TCATGATGGGTCACATATAGACATATGTACATATTATATAT TCATGATGGGTCACATATAGACTTATGTACATATTATATAT < 41bp 1 0.172865742701311 1 0.779928803443909 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 DDX55 ENSG00000111361;ENSG00000111364 UTR3 Human other chr12:124105114 chr12:124105116 . . 0 hm6A_associated_SNPs_14784 0 0 1 4 124105111 124105132 mRNA hsa-miR-374b DDX55 miRanda miRanda
14034 chr12 124144963 124144963 1 + G A rs11573009 124144949 + 124144929 124144969 41 TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAGGGAATC TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAAGGAATC < 41bp 1 0.558191392026526 1 0.896077394485474 experiment 0.883617215946948 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124144949 chr12:124144963 . . 0 hm6A_associated_SNPs_14787 0 0 1 7 124144959 124144980 mRNA hsa-miR-153 GTF2H3 miRanda miRanda
14034 chr12 124144963 124144963 1 + G A rs11573009 124144949 + 124144929 124144969 41 TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAGGGAATC TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAAGGAATC < 41bp 1 0.558191392026526 1 0.896077394485474 experiment 0.883617215946948 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124144949 chr12:124144963 . . 0 hm6A_associated_SNPs_14787 0 0 1 7 124144961 124144983 mRNA hsa-miR-155 GTF2H3 miRanda miRanda
14034 chr12 124144963 124144963 1 + G A rs11573009 124144949 + 124144929 124144969 41 TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAGGGAATC TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAAGGAATC < 41bp 1 0.558191392026526 1 0.896077394485474 experiment 0.883617215946948 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124144949 chr12:124144963 . . 0 hm6A_associated_SNPs_14787 0 0 1 7 124144959 124144979 mRNA hsa-miR-376c GTF2H3 miRanda miRanda
14034 chr12 124144963 124144963 1 + G A rs11573009 124144949 + 124144929 124144969 41 TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAGGGAATC TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAAGGAATC < 41bp 1 0.558191392026526 1 0.896077394485474 experiment 0.883617215946948 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124144949 chr12:124144963 . . 0 hm6A_associated_SNPs_14787 0 0 1 7 124144945 124144964 mRNA hsa-miR-371-5p GTF2H3 miRanda miRanda
14034 chr12 124144963 124144963 1 + G A rs11573009 124144949 + 124144929 124144969 41 TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAGGGAATC TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAAGGAATC < 41bp 1 0.558191392026526 1 0.896077394485474 experiment 0.883617215946948 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124144949 chr12:124144963 . . 0 hm6A_associated_SNPs_14787 0 0 1 7 124144959 124144979 mRNA hsa-miR-376a GTF2H3 miRanda miRanda
14034 chr12 124144963 124144963 1 + G A rs11573009 124144949 + 124144929 124144969 41 TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAGGGAATC TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAAGGAATC < 41bp 1 0.558191392026526 1 0.896077394485474 experiment 0.883617215946948 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124144949 chr12:124144963 . . 0 hm6A_associated_SNPs_14787 0 0 1 7 124144961 124144980 mRNA hsa-miR-448 GTF2H3 miRanda miRanda
14034 chr12 124144963 124144963 1 + G A rs11573009 124144949 + 124144929 124144969 41 TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAGGGAATC TCATCCTGTGCTTCTGGAGGACTGATTTGTTTGAAGGAATC < 41bp 1 0.558191392026526 1 0.896077394485474 experiment 0.883617215946948 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124144949 chr12:124144963 . . 0 hm6A_associated_SNPs_14787 0 0 1 7 124144958 124144979 mRNA hsa-miR-376b GTF2H3 miRanda miRanda
14034 chr12 124145161 124145161 1 + A G rs188937400 124145169 + 124145149 124145189 41 ACGTAGCTTTGGAAAAAGGGACTATTTGTGGAGTAATGGCA ACGTAGCTTTGGGAAAAGGGACTATTTGTGGAGTAATGGCA < 41bp 1 0.633203166101868 1 0.927078425884247 experiment 0.733593667796265 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124145169 chr12:124145161 . . 0 hm6A_associated_SNPs_14788 0 0 1 2 124145147 124145170 mRNA hsa-miR-204 GTF2H3 miRanda miRanda
14034 chr12 124145161 124145161 1 + A G rs188937400 124145169 + 124145149 124145189 41 ACGTAGCTTTGGAAAAAGGGACTATTTGTGGAGTAATGGCA ACGTAGCTTTGGGAAAAGGGACTATTTGTGGAGTAATGGCA < 41bp 1 0.633203166101868 1 0.927078425884247 experiment 0.733593667796265 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124145169 chr12:124145161 . . 0 hm6A_associated_SNPs_14788 0 0 1 2 124145147 124145170 mRNA hsa-miR-211 GTF2H3 miRanda miRanda
14034 chr12 125627448 125627448 1 + T C rs372685017 125627436 + 125627416 125627456 41 AGGATCTCTTTATTGCACAGACTGAATGGCTTTACATGTTT AGGATCTCTTTATTGCACAGACTGAATGGCTTCACATGTTT < 41bp 1 0.152498554345405 1 0.905037999153137 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 33 AACS ENSG00000081760 UTR3 Human protein_coding chr12:125627436 chr12:125627448 . . 0 hm6A_associated_SNPs_14811 0 0 0 3 125627447 125627466 mRNA hsa-miR-23a AACS miRanda miRanda
14034 chr12 125627448 125627448 1 + T C rs372685017 125627436 + 125627416 125627456 41 AGGATCTCTTTATTGCACAGACTGAATGGCTTTACATGTTT AGGATCTCTTTATTGCACAGACTGAATGGCTTCACATGTTT < 41bp 1 0.152498554345405 1 0.905037999153137 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 33 AACS ENSG00000081760 UTR3 Human protein_coding chr12:125627436 chr12:125627448 . . 0 hm6A_associated_SNPs_14811 0 0 0 3 125627446 125627466 mRNA hsa-miR-23b AACS miRanda miRanda
14034 chr12 125627448 125627448 1 + T C rs372685017 125627436 + 125627416 125627456 41 AGGATCTCTTTATTGCACAGACTGAATGGCTTTACATGTTT AGGATCTCTTTATTGCACAGACTGAATGGCTTCACATGTTT < 41bp 1 0.152498554345405 1 0.905037999153137 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 33 AACS ENSG00000081760 UTR3 Human protein_coding chr12:125627436 chr12:125627448 . . 0 hm6A_associated_SNPs_14811 0 0 0 3 125627437 125627458 mRNA hsa-miR-494 AACS miRanda miRanda
14034 chr12 126139780 126139780 1 + T C rs75914472 126139785 + 126139765 126139805 41 CCTCTGGAATTCTTTTTGAAACATGAAGAGAAGAAATTTCA CCTCTGGAATTCTTTCTGAAACATGAAGAGAAGAAATTTCA < 41bp 1 0.153221754974552 1 0.0179731547832489 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 16 TMEM132B ENSG00000139364 UTR3 Human protein_coding chr12:126139785 chr12:126139780 . . 0 hm6A_associated_SNPs_14813 0 0 0 1 126139759 126139780 mRNA hsa-miR-186 TMEM132B miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360708 131360729 mRNA hsa-miR-15a RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360706 131360729 mRNA hsa-miR-16 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360706 131360728 mRNA hsa-miR-103 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360706 131360728 mRNA hsa-miR-107 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360706 131360727 mRNA hsa-miR-214 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360711 131360731 mRNA hsa-miR-217 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360710 131360729 mRNA hsa-miR-15b RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360713 131360734 mRNA hsa-miR-134 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360707 131360729 mRNA hsa-miR-195 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360707 131360729 mRNA hsa-miR-424 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360709 131360729 mRNA hsa-miR-497 RAN miRanda miRanda
14034 chr12 131360715 131360715 1 + A C rs3803012 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATCTAAGACTGCTGCAGTCACATCACAA < 41bp 1 0.345123674970399 1 0.886587917804718 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360715 . . 0 hm6A_associated_SNPs_14815 0 0 1 12 131360701 131360723 mRNA hsa-miR-590-5p RAN miRanda miRanda
14034 chr12 131360740 131360740 1 + A G rs149187550 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAG < 41bp 1 0.357767543512208 1 0.915921270847321 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 41 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360740 . . 0 hm6A_associated_SNPs_14816 0 0 1 2 131360733 131360754 mRNA hsa-miR-197 RAN miRanda miRanda
14034 chr12 131360740 131360740 1 + A G rs149187550 131360720 + 131360700 131360740 41 CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAA CCTTGAGTTTCATATATAAGACTGCTGCAGTCACATCACAG < 41bp 1 0.357767543512208 1 0.915921270847321 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 41 RAN ENSG00000132341 UTR3 Human protein_coding chr12:131360720 chr12:131360740 . . 0 hm6A_associated_SNPs_14816 0 0 1 2 131360737 131360759 mRNA hsa-miR-876-5p RAN miRanda miRanda
14034 chr12 132428302 132428302 1 + G A rs139264390 132428284 + 132428264 132428304 41 CAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTT CAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTATT < 41bp 1 0.598277984024373 1 0.664724230766296 experiment 0.803444031951254 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 39 PUS1 ENSG00000177192 UTR3 Human protein_coding chr12:132428284 chr12:132428302 . . 0 hm6A_associated_SNPs_14825 0 0 1 1 132428293 132428316 mRNA hsa-miR-335 PUS1 miRanda miRanda
14034 chr12 132563028 132563028 1 + T G rs73482119 132563044 + 132563024 132563064 41 TATTTGACATAGTGTGTTAAACAGCTCCTGAGAACCTTTGG TATTGGACATAGTGTGTTAAACAGCTCCTGAGAACCTTTGG < 41bp 1 0.362854830823222 1 0.94196093082428 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 EP400 ENSG00000257000 ncRNA_intronic Human antisense chr12:132563044 chr12:132563028 . . 0 hm6A_associated_SNPs_14840 0 0 1 1 132563028 132563053 mRNA hsa-miR-28-5p EP400 miRanda miRanda
14034 chr12 132613274 132613274 1 + C G rs7974299 132613262 + 132613242 132613282 41 GTAACCAGAACATACAAAAAACTGTCAAAGCTCACTAATAC GTAACCAGAACATACAAAAAACTGTCAAAGCTGACTAATAC < 41bp 1 0.593166983526884 1 0.458407938480377 experiment 0.813666032946233 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 EP400NL;DDX51 ENSG00000256804;ENSG00000185163 intergenic Human other chr12:132613262 chr12:132613274 . . 0 hm6A_associated_SNPs_14844 0 0 1 2 132613254 132613278 mRNA hsa-miR-28-5p EP400NL miRanda miRanda
14034 chr12 132613274 132613274 1 + C G rs7974299 132613262 + 132613242 132613282 41 GTAACCAGAACATACAAAAAACTGTCAAAGCTCACTAATAC GTAACCAGAACATACAAAAAACTGTCAAAGCTGACTAATAC < 41bp 1 0.593166983526884 1 0.458407938480377 experiment 0.813666032946233 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 EP400NL;DDX51 ENSG00000256804;ENSG00000185163 intergenic Human other chr12:132613262 chr12:132613274 . . 0 hm6A_associated_SNPs_14844 0 0 1 2 132613273 132613294 mRNA hsa-miR-382 EP400NL miRanda miRanda
14034 chr12 133281359 133281359 1 + G A rs188545407 133281369 + 133281349 133281389 41 ATCCAGTCAGGATGTCACTGACTCTAAATCAGGTGATTCAA ATCCAGTCAGAATGTCACTGACTCTAAATCAGGTGATTCAA < 41bp 1 0.685930394006795 1 0.942226111888885 experiment 0.62813921198641 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 PXMP2 ENSG00000176894;ENSG00000256632 CDS Human other chr12:133281369 chr12:133281359 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_14849 0 0 1 1 133281338 133281360 mRNA hsa-miR-370 PXMP2 miRanda miRanda
14034 chr12 133297856 133297856 1 + C T rs530610941 133297853 + 133297833 133297873 41 CATCCTTTTAATTTCTTAAAACCCTCTTGTCCCTTAAATAT CATCCTTTTAATTTCTTAAAACCTTCTTGTCCCTTAAATAT < 41bp 1 0.101877701281173 1 0.0101459622383118 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 PGAM5 ENSG00000247077 UTR3 Human protein_coding chr12:133297853 chr12:133297856 . . 0 hm6A_associated_SNPs_14856 0 0 1 1 133297837 133297858 mRNA hsa-miR-296-3p PGAM5 miRanda miRanda
14034 chr12 133683261 133683261 1 + T A rs905226 133683257 + 133683237 133683277 41 AATTTACACTGCAAAGAAAAACTATGAATGTATGGAATTTT AATTTACACTGCAAAGAAAAACTAAGAATGTATGGAATTTT < 41bp 1 0.487504261316903 1 0.988049983978271 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 25 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683257 chr12:133683261 . . 0 hm6A_associated_SNPs_14859 0 0 0 4 133683246 133683268 mRNA hsa-miR-181a ZNF140 miRanda miRanda
14034 chr12 133683261 133683261 1 + T A rs905226 133683257 + 133683237 133683277 41 AATTTACACTGCAAAGAAAAACTATGAATGTATGGAATTTT AATTTACACTGCAAAGAAAAACTAAGAATGTATGGAATTTT < 41bp 1 0.487504261316903 1 0.988049983978271 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 25 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683257 chr12:133683261 . . 0 hm6A_associated_SNPs_14859 0 0 0 4 133683246 133683268 mRNA hsa-miR-181b ZNF140 miRanda miRanda
14034 chr12 133683261 133683261 1 + T A rs905226 133683257 + 133683237 133683277 41 AATTTACACTGCAAAGAAAAACTATGAATGTATGGAATTTT AATTTACACTGCAAAGAAAAACTAAGAATGTATGGAATTTT < 41bp 1 0.487504261316903 1 0.988049983978271 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 25 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683257 chr12:133683261 . . 0 hm6A_associated_SNPs_14859 0 0 0 4 133683247 133683268 mRNA hsa-miR-181c ZNF140 miRanda miRanda
14034 chr12 133683261 133683261 1 + T A rs905226 133683257 + 133683237 133683277 41 AATTTACACTGCAAAGAAAAACTATGAATGTATGGAATTTT AATTTACACTGCAAAGAAAAACTAAGAATGTATGGAATTTT < 41bp 1 0.487504261316903 1 0.988049983978271 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 25 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683257 chr12:133683261 . . 0 hm6A_associated_SNPs_14859 0 0 0 4 133683246 133683268 mRNA hsa-miR-181d ZNF140 miRanda miRanda
14034 chr12 133683330 133683330 1 + T C rs533568902 133683310 + 133683290 133683330 41 ATAATGCCTTACTTCAGAGAACTCTTGGAAAGAAGCCTTAT ATAATGCCTTACTTCAGAGAACTCTTGGAAAGAAGCCTTAC < 41bp 1 0.498229665163103 1 0.998363971710205 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683310 chr12:133683330 . . 0 hm6A_associated_SNPs_14861 0 0 1 2 133683330 133683350 mRNA hsa-miR-27a ZNF140 miRanda miRanda
14034 chr12 133683330 133683330 1 + T C rs533568902 133683310 + 133683290 133683330 41 ATAATGCCTTACTTCAGAGAACTCTTGGAAAGAAGCCTTAT ATAATGCCTTACTTCAGAGAACTCTTGGAAAGAAGCCTTAC < 41bp 1 0.498229665163103 1 0.998363971710205 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683310 chr12:133683330 . . 0 hm6A_associated_SNPs_14861 0 0 1 2 133683330 133683350 mRNA hsa-miR-27b ZNF140 miRanda miRanda
14034 chr12 133683649 133683649 1 + T C rs115671797 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTCTACAAA < 41bp 1 0.667335579496977 1 0.985955595970154 experiment 0.665328841006047 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683649 . . 0 hm6A_associated_SNPs_14864 0 0 1 7 133683645 133683669 mRNA hsa-miR-17 ZNF140 miRanda miRanda
14034 chr12 133683649 133683649 1 + T C rs115671797 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTCTACAAA < 41bp 1 0.667335579496977 1 0.985955595970154 experiment 0.665328841006047 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683649 . . 0 hm6A_associated_SNPs_14864 0 0 1 7 133683646 133683669 mRNA hsa-miR-20a ZNF140 miRanda miRanda
14034 chr12 133683649 133683649 1 + T C rs115671797 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTCTACAAA < 41bp 1 0.667335579496977 1 0.985955595970154 experiment 0.665328841006047 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683649 . . 0 hm6A_associated_SNPs_14864 0 0 1 7 133683643 133683669 mRNA hsa-miR-93 ZNF140 miRanda miRanda
14034 chr12 133683649 133683649 1 + T C rs115671797 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTCTACAAA < 41bp 1 0.667335579496977 1 0.985955595970154 experiment 0.665328841006047 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683649 . . 0 hm6A_associated_SNPs_14864 0 0 1 7 133683645 133683669 mRNA hsa-miR-106a ZNF140 miRanda miRanda
14034 chr12 133683649 133683649 1 + T C rs115671797 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTCTACAAA < 41bp 1 0.667335579496977 1 0.985955595970154 experiment 0.665328841006047 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683649 . . 0 hm6A_associated_SNPs_14864 0 0 1 7 133683647 133683669 mRNA hsa-miR-106b ZNF140 miRanda miRanda
14034 chr12 133683649 133683649 1 + T C rs115671797 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTCTACAAA < 41bp 1 0.667335579496977 1 0.985955595970154 experiment 0.665328841006047 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683649 . . 0 hm6A_associated_SNPs_14864 0 0 1 7 133683646 133683669 mRNA hsa-miR-20b ZNF140 miRanda miRanda
14034 chr12 133683649 133683649 1 + T C rs115671797 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTCTACAAA < 41bp 1 0.667335579496977 1 0.985955595970154 experiment 0.665328841006047 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683649 . . 0 hm6A_associated_SNPs_14864 0 0 1 7 133683645 133683669 mRNA hsa-miR-519d ZNF140 miRanda miRanda
14034 chr12 133683651 133683651 1 + A G rs539267303 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTGCAAA < 41bp 1 0.701580123747309 1 0.98400354385376 experiment 0.596839752505382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683651 . . 0 hm6A_associated_SNPs_14865 0 0 1 7 133683645 133683669 mRNA hsa-miR-17 ZNF140 miRanda miRanda
14034 chr12 133683651 133683651 1 + A G rs539267303 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTGCAAA < 41bp 1 0.701580123747309 1 0.98400354385376 experiment 0.596839752505382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683651 . . 0 hm6A_associated_SNPs_14865 0 0 1 7 133683646 133683669 mRNA hsa-miR-20a ZNF140 miRanda miRanda
14034 chr12 133683651 133683651 1 + A G rs539267303 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTGCAAA < 41bp 1 0.701580123747309 1 0.98400354385376 experiment 0.596839752505382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683651 . . 0 hm6A_associated_SNPs_14865 0 0 1 7 133683643 133683669 mRNA hsa-miR-93 ZNF140 miRanda miRanda
14034 chr12 133683651 133683651 1 + A G rs539267303 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTGCAAA < 41bp 1 0.701580123747309 1 0.98400354385376 experiment 0.596839752505382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683651 . . 0 hm6A_associated_SNPs_14865 0 0 1 7 133683645 133683669 mRNA hsa-miR-106a ZNF140 miRanda miRanda
14034 chr12 133683651 133683651 1 + A G rs539267303 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTGCAAA < 41bp 1 0.701580123747309 1 0.98400354385376 experiment 0.596839752505382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683651 . . 0 hm6A_associated_SNPs_14865 0 0 1 7 133683647 133683669 mRNA hsa-miR-106b ZNF140 miRanda miRanda
14034 chr12 133683651 133683651 1 + A G rs539267303 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTGCAAA < 41bp 1 0.701580123747309 1 0.98400354385376 experiment 0.596839752505382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683651 . . 0 hm6A_associated_SNPs_14865 0 0 1 7 133683646 133683669 mRNA hsa-miR-20b ZNF140 miRanda miRanda
14034 chr12 133683651 133683651 1 + A G rs539267303 133683635 + 133683615 133683655 41 AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTACAAA AACCAGGACAGAAAGCATGGACAAGGGATGAGCTTTGCAAA < 41bp 1 0.701580123747309 1 0.98400354385376 experiment 0.596839752505382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 ZNF140 ENSG00000196387 UTR3 Human protein_coding chr12:133683635 chr12:133683651 . . 0 hm6A_associated_SNPs_14865 0 0 1 7 133683645 133683669 mRNA hsa-miR-519d ZNF140 miRanda miRanda
14034 chr13 20600760 20600760 1 + A G rs34660436 20600767 + 20600747 20600787 41 TTTAGAAATATGGAAAACTGACAACTTGTACTGGTTGCCGA TTTAGAAATATGGGAAACTGACAACTTGTACTGGTTGCCGA < 41bp 1 0.627664076042798 1 0.32206529378891 experiment 0.744671847914405 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20600767 chr13:20600760 synonymous SNV . 0 hm6A_associated_SNPs_14871 0 0 1 2 20600752 20600769 mRNA hsa-miR-223 ZMYM2 miRanda miRanda
14034 chr13 20600760 20600760 1 + A G rs34660436 20600767 + 20600747 20600787 41 TTTAGAAATATGGAAAACTGACAACTTGTACTGGTTGCCGA TTTAGAAATATGGGAAACTGACAACTTGTACTGGTTGCCGA < 41bp 1 0.627664076042798 1 0.32206529378891 experiment 0.744671847914405 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20600767 chr13:20600760 synonymous SNV . 0 hm6A_associated_SNPs_14871 0 0 1 2 20600753 20600774 mRNA hsa-miR-382 ZMYM2 miRanda miRanda
14034 chr13 21752609 21752609 1 + C T rs553885517 21752625 + 21752605 21752645 41 GGAACAGGAATAAAGGAGAAACCACTATTGACTGGGAAGAC GGAATAGGAATAAAGGAGAAACCACTATTGACTGGGAAGAC < 41bp 1 0.0567136511027855 1 0.0526275336742401 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 MRPL57 ENSG00000173141 UTR3 Human protein_coding chr13:21752625 chr13:21752609 . . 0 hm6A_associated_SNPs_14882 0 0 1 2 21752604 21752624 mRNA hsa-miR-204 MRP63 miRanda miRanda
14034 chr13 21752609 21752609 1 + C T rs553885517 21752625 + 21752605 21752645 41 GGAACAGGAATAAAGGAGAAACCACTATTGACTGGGAAGAC GGAATAGGAATAAAGGAGAAACCACTATTGACTGGGAAGAC < 41bp 1 0.0567136511027855 1 0.0526275336742401 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 MRPL57 ENSG00000173141 UTR3 Human protein_coding chr13:21752625 chr13:21752609 . . 0 hm6A_associated_SNPs_14882 0 0 1 2 21752609 21752631 mRNA hsa-miR-140-5p MRP63 miRanda miRanda
14034 chr13 24248033 24248033 1 + T A rs147430287 24248025 + 24248005 24248045 41 AGTGTTTCTATTTGAGAAGGACACTTTTTCATCATCTAAAC AGTGTTTCTATTTGAGAAGGACACTTTTACATCATCTAAAC < 41bp 1 0.746690729608461 1 0.938604354858398 experiment 0.506618540783078 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 TNFRSF19 ENSG00000127863 UTR3 Human protein_coding chr13:24248025 chr13:24248033 . . 0 hm6A_associated_SNPs_14884 0 0 1 1 24248020 24248041 mRNA hsa-miR-143 TNFRSF19 miRanda miRanda
14034 chr13 24877712 24877712 1 + C T rs111803671 24877704 + 24877684 24877724 41 CTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATC CTGCCTGCACGCCTTCAGTAACTCCGAGTAGAAATCACATC < 41bp 1 0.379462920497304 1 0.728838682174683 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 29 SPATA13 ENSG00000182957 UTR3 Human protein_coding chr13:24877704 chr13:24877712 . . 0 hm6A_associated_SNPs_14886 0 0 0 1 24877711 24877730 mRNA hsa-miR-31 SPATA13 miRanda miRanda
14034 chr13 24877743 24877743 1 + C T rs372130157 24877741 + 24877721 24877761 41 CATCTTGCCCACATGCTGTAACCTAAGAAACTGCTATGCAA CATCTTGCCCACATGCTGTAACTTAAGAAACTGCTATGCAA < 41bp 1 0.455530551993776 1 0.868476986885071 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 SPATA13 ENSG00000182957 UTR3 Human protein_coding chr13:24877741 chr13:24877743 . . 0 hm6A_associated_SNPs_14887 0 0 0 1 24877740 24877761 mRNA hsa-miR-153 SPATA13 miRanda miRanda
14034 chr13 24877743 24877743 1 + C T rs372130157 24877750 + 24877730 24877770 41 CACATGCTGTAACCTAAGAAACTGCTATGCAAGGCTGGGTG CACATGCTGTAACTTAAGAAACTGCTATGCAAGGCTGGGTG < 41bp 1 0.531183591167684 1 0.908805966377258 experiment 0.937632817664631 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 14 SPATA13 ENSG00000182957 UTR3 Human protein_coding chr13:24877750 chr13:24877743 . . 0 hm6A_associated_SNPs_14888 0 0 0 1 24877740 24877761 mRNA hsa-miR-153 SPATA13 miRanda miRanda
14034 chr13 28004098 28004098 1 + T C rs188074983 28004094 + 28004074 28004114 41 AAACATGAAAATCAACAAAAACAATATATAGTAAGTATGAT AAACATGAAAATCAACAAAAACAACATATAGTAAGTATGAT < 41bp 1 0.759998623301312 1 0.414136707782745 experiment 0.480002753397376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28004094 chr13:28004098 nonsynonymous SNV 0.238 4 hm6A_associated_SNPs_14903 0 0 1 3 28004089 28004103 mRNA hsa-miR-217 GTF3A miRanda miRanda
14034 chr13 28004098 28004098 1 + T C rs188074983 28004094 + 28004074 28004114 41 AAACATGAAAATCAACAAAAACAATATATAGTAAGTATGAT AAACATGAAAATCAACAAAAACAACATATAGTAAGTATGAT < 41bp 1 0.759998623301312 1 0.414136707782745 experiment 0.480002753397376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28004094 chr13:28004098 nonsynonymous SNV 0.238 4 hm6A_associated_SNPs_14903 0 0 1 3 28004087 28004103 mRNA hsa-miR-153 GTF3A miRanda miRanda
14034 chr13 28004098 28004098 1 + T C rs188074983 28004094 + 28004074 28004114 41 AAACATGAAAATCAACAAAAACAATATATAGTAAGTATGAT AAACATGAAAATCAACAAAAACAACATATAGTAAGTATGAT < 41bp 1 0.759998623301312 1 0.414136707782745 experiment 0.480002753397376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28004094 chr13:28004098 nonsynonymous SNV 0.238 4 hm6A_associated_SNPs_14903 0 0 1 3 28004087 28004103 mRNA hsa-miR-448 GTF3A miRanda miRanda
14034 chr13 28008980 28008980 1 + C T rs184012616 28008971 + 28008951 28008991 41 TATGTGAAGTATGCCGGAAAACATTTAAACGCAAAGATTAC TATGTGAAGTATGCCGGAAAACATTTAAATGCAAAGATTAC < 41bp 1 0.797454473349673 1 0.866727352142334 experiment 0.405091053300655 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28008971 chr13:28008980 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_14904 0 0 1 1 28008965 28008986 mRNA hsa-miR-450a GTF3A miRanda miRanda
14034 chr13 28240417 28240417 1 + C G rs17085866 28240410 + 28240390 28240430 41 AGTTTTCAGAGATTGTTAAAACTGGTTCCAATTTTTTGGTC AGTTTTCAGAGATTGTTAAAACTGGTTGCAATTTTTTGGTC < 41bp 1 0.487464106424203 1 0.905149579048157 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 POLR1D ENSG00000186184 UTR3 Human protein_coding chr13:28240410 chr13:28240417 . . 0 hm6A_associated_SNPs_14907 0 0 1 2 28240392 28240417 mRNA hsa-miR-451 POLR1D miRanda miRanda
14034 chr13 28240417 28240417 1 + C G rs17085866 28240410 + 28240390 28240430 41 AGTTTTCAGAGATTGTTAAAACTGGTTCCAATTTTTTGGTC AGTTTTCAGAGATTGTTAAAACTGGTTGCAATTTTTTGGTC < 41bp 1 0.487464106424203 1 0.905149579048157 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 POLR1D ENSG00000186184 UTR3 Human protein_coding chr13:28240410 chr13:28240417 . . 0 hm6A_associated_SNPs_14907 0 0 1 2 28240417 28240438 mRNA hsa-miR-539 POLR1D miRanda miRanda
14034 chr13 28867579 28867579 1 + T C rs147324454 28867590 + 28867570 28867610 41 TATGAAGTTTTGCTCTTTGAACCACAGCTTTATTATGGTCC TATGAAGTTCTGCTCTTTGAACCACAGCTTTATTATGGTCC < 41bp 1 0.368063306415654 1 0.5550896525383 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 PAN3 ENSG00000152520 UTR3 Human protein_coding chr13:28867590 chr13:28867579 . . 0 hm6A_associated_SNPs_14913 0 0 1 2 28867579 28867601 mRNA hsa-miR-320a PAN3 miRanda miRanda
14034 chr13 28867579 28867579 1 + T C rs147324454 28867590 + 28867570 28867610 41 TATGAAGTTTTGCTCTTTGAACCACAGCTTTATTATGGTCC TATGAAGTTCTGCTCTTTGAACCACAGCTTTATTATGGTCC < 41bp 1 0.368063306415654 1 0.5550896525383 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 PAN3 ENSG00000152520 UTR3 Human protein_coding chr13:28867590 chr13:28867579 . . 0 hm6A_associated_SNPs_14913 0 0 1 2 28867579 28867601 mRNA hsa-miR-320b PAN3 miRanda miRanda
14034 chr13 28867592 28867592 1 + C T rs576269955 28867590 + 28867570 28867610 41 TATGAAGTTTTGCTCTTTGAACCACAGCTTTATTATGGTCC TATGAAGTTTTGCTCTTTGAACTACAGCTTTATTATGGTCC < 41bp 1 0.592259085252593 1 0.693860709667206 experiment 0.815481829494815 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 PAN3 ENSG00000152520 UTR3 Human protein_coding chr13:28867590 chr13:28867592 . . 0 hm6A_associated_SNPs_14914 0 0 1 4 28867579 28867601 mRNA hsa-miR-320a PAN3 miRanda miRanda
14034 chr13 28867592 28867592 1 + C T rs576269955 28867590 + 28867570 28867610 41 TATGAAGTTTTGCTCTTTGAACCACAGCTTTATTATGGTCC TATGAAGTTTTGCTCTTTGAACTACAGCTTTATTATGGTCC < 41bp 1 0.592259085252593 1 0.693860709667206 experiment 0.815481829494815 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 PAN3 ENSG00000152520 UTR3 Human protein_coding chr13:28867590 chr13:28867592 . . 0 hm6A_associated_SNPs_14914 0 0 1 4 28867579 28867601 mRNA hsa-miR-320b PAN3 miRanda miRanda
14034 chr13 28867592 28867592 1 + C T rs576269955 28867590 + 28867570 28867610 41 TATGAAGTTTTGCTCTTTGAACCACAGCTTTATTATGGTCC TATGAAGTTTTGCTCTTTGAACTACAGCTTTATTATGGTCC < 41bp 1 0.592259085252593 1 0.693860709667206 experiment 0.815481829494815 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 PAN3 ENSG00000152520 UTR3 Human protein_coding chr13:28867590 chr13:28867592 . . 0 hm6A_associated_SNPs_14914 0 0 1 4 28867581 28867601 mRNA hsa-miR-320c PAN3 miRanda miRanda
14034 chr13 28867592 28867592 1 + C T rs576269955 28867590 + 28867570 28867610 41 TATGAAGTTTTGCTCTTTGAACCACAGCTTTATTATGGTCC TATGAAGTTTTGCTCTTTGAACTACAGCTTTATTATGGTCC < 41bp 1 0.592259085252593 1 0.693860709667206 experiment 0.815481829494815 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 PAN3 ENSG00000152520 UTR3 Human protein_coding chr13:28867590 chr13:28867592 . . 0 hm6A_associated_SNPs_14914 0 0 1 4 28867582 28867601 mRNA hsa-miR-320d PAN3 miRanda miRanda
14034 chr13 29252401 29252401 1 + T C rs2511248 29252405 + 29252385 29252425 41 CTTTGGTTTACAGCCATGTGACAATTAAAAGCACTAAAGGG CTTTGGTTTACAGCCACGTGACAATTAAAAGCACTAAAGGG < 41bp 1 0.624840196197069 1 0.750723958015442 experiment 0.750319607605862 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 17 POMP ENSG00000132963 UTR3 Human protein_coding chr13:29252405 chr13:29252401 . . 0 hm6A_associated_SNPs_14915 0 0 1 1 29252400 29252420 mRNA hsa-miR-218 POMP miRanda miRanda
14034 chr13 34411193 34411193 1 + T C rs572405706 34411188 + 34411168 34411208 41 TGGACCAAAGGGTTTACTTGACAAATTTGTGTGACAGACTC TGGACCAAAGGGTTTACTTGACAAACTTGTGTGACAGACTC < 41bp 1 0.157451936857876 1 0.895131230354309 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 26 RFC3 ENSG00000133119 UTR3 Human protein_coding chr13:34411188 chr13:34411193 . . 0 hm6A_associated_SNPs_14933 0 0 1 1 34411178 34411202 mRNA hsa-miR-377 RFC3 miRanda miRanda
14034 chr13 34411193 34411193 1 + T C rs572405706 34411205 + 34411185 34411225 41 TTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACT TTGACAAACTTGTGTGACAGACTCCGAACAATTCCTTTACT < 41bp 1 0.0988418004000678 1 0.956519246101379 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 9 RFC3 ENSG00000133119 UTR3 Human protein_coding chr13:34411205 chr13:34411193 . . 0 hm6A_associated_SNPs_14934 0 0 1 1 34411178 34411202 mRNA hsa-miR-377 RFC3 miRanda miRanda
14034 chr13 41386433 41386433 1 + C T rs138530613 41386438 + 41386418 41386458 41 AGTGGAAATGAGGAACGGAAACTTAGGTTGGGAGAATATTT AGTGGAAATGAGGAATGGAAACTTAGGTTGGGAGAATATTT < 41bp 1 0.101553851221468 1 0.0406409502029419 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 TPTE2P5 ENSG00000207652;ENSG00000168852 intergenic Human other chr13:41386438 chr13:41386433 . . 0 hm6A_associated_SNPs_14956 0 0 1 1 41386431 41386452 mRNA hsa-miR-150 SLC25A15 miRanda miRanda
14034 chr13 45857863 45857863 1 + T A rs543349849 45857883 + 45857863 45857903 41 TGTTTTTTTGAGGAGAAAGAACAGATTTATTTATAGACTTA AGTTTTTTTGAGGAGAAAGAACAGATTTATTTATAGACTTA < 41bp 1 0.609552272353318 1 0.977132558822632 experiment 0.780895455293364 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 GTF2F2 ENSG00000188342 UTR3 Human protein_coding chr13:45857883 chr13:45857863 . . 0 hm6A_associated_SNPs_14973 0 0 1 3 45857847 45857867 mRNA hsa-miR-212 GTF2F2 miRanda miRanda
14034 chr13 45857863 45857863 1 + T A rs543349849 45857883 + 45857863 45857903 41 TGTTTTTTTGAGGAGAAAGAACAGATTTATTTATAGACTTA AGTTTTTTTGAGGAGAAAGAACAGATTTATTTATAGACTTA < 41bp 1 0.609552272353318 1 0.977132558822632 experiment 0.780895455293364 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 GTF2F2 ENSG00000188342 UTR3 Human protein_coding chr13:45857883 chr13:45857863 . . 0 hm6A_associated_SNPs_14973 0 0 1 3 45857846 45857867 mRNA hsa-miR-132 GTF2F2 miRanda miRanda
14034 chr13 45857863 45857863 1 + T A rs543349849 45857883 + 45857863 45857903 41 TGTTTTTTTGAGGAGAAAGAACAGATTTATTTATAGACTTA AGTTTTTTTGAGGAGAAAGAACAGATTTATTTATAGACTTA < 41bp 1 0.609552272353318 1 0.977132558822632 experiment 0.780895455293364 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 GTF2F2 ENSG00000188342 UTR3 Human protein_coding chr13:45857883 chr13:45857863 . . 0 hm6A_associated_SNPs_14973 0 0 1 3 45857856 45857875 mRNA hsa-miR-371-5p GTF2F2 miRanda miRanda
14034 chr13 46110158 46110158 1 + C A rs114958509 46110178 + 46110158 46110198 41 CCTGATTGTTGTCATTTGTAACAGGTCACTTCCTTTTCACT ACTGATTGTTGTCATTTGTAACAGGTCACTTCCTTTTCACT < 41bp 1 0.213892619709952 1 0.192004412412643 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 1 COG3 ENSG00000136152 UTR3 Human protein_coding chr13:46110178 chr13:46110158 . . 0 hm6A_associated_SNPs_14976 0 0 1 1 46110150 46110173 mRNA hsa-miR-425 COG3 miRanda miRanda
14034 chr13 47325598 47325598 1 + A G rs145843804 47325605 + 47325585 47325625 41 TCTGTCCCCCAATATAATGAACTGACTAAAATCAAGAGAGC TCTGTCCCCCAATGTAATGAACTGACTAAAATCAAGAGAGC < 41bp 1 0.356720402250735 1 0.949520826339722 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 LRCH1 ENSG00000136141 UTR3 Human protein_coding chr13:47325605 chr13:47325598 . . 0 hm6A_associated_SNPs_14978 0 0 0 1 47325590 47325611 mRNA hsa-miR-223 LRCH1 miRanda miRanda
14034 chr13 47325598 47325598 1 + A G rs145843804 47325609 + 47325589 47325629 41 TCCCCCAATATAATGAACTGACTAAAATCAAGAGAGCACCC TCCCCCAATGTAATGAACTGACTAAAATCAAGAGAGCACCC < 41bp 1 0.266482709665308 1 0.895334362983704 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 10 LRCH1 ENSG00000136141 UTR3 Human protein_coding chr13:47325609 chr13:47325598 . . 0 hm6A_associated_SNPs_14979 0 0 0 1 47325590 47325611 mRNA hsa-miR-223 LRCH1 miRanda miRanda
14034 chr13 48835503 48835503 1 + A T rs9332304 48835510 + 48835490 48835530 41 ATCTCATTAATTCAATTAAAACCATTACCTTAAAATTTTTT ATCTCATTAATTCTATTAAAACCATTACCTTAAAATTTTTT < 41bp 1 0.19052305745385 1 0.377147644758224 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 14 ITM2B ENSG00000136156 UTR3 Human protein_coding chr13:48835510 chr13:48835503 . . 0 hm6A_associated_SNPs_14982 0 0 1 1 48835495 48835516 mRNA hsa-miR-140-5p ITM2B miRanda miRanda
14034 chr13 48835504 48835504 1 + A G rs566768439 48835510 + 48835490 48835530 41 ATCTCATTAATTCAATTAAAACCATTACCTTAAAATTTTTT ATCTCATTAATTCAGTTAAAACCATTACCTTAAAATTTTTT < 41bp 1 0.178735671321469 1 0.433117270469666 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 15 ITM2B ENSG00000136156 UTR3 Human protein_coding chr13:48835510 chr13:48835504 . . 0 hm6A_associated_SNPs_14983 0 0 1 1 48835495 48835516 mRNA hsa-miR-140-5p ITM2B miRanda miRanda
14034 chr13 52606514 52606514 1 + C T rs540784098 52606530 + 52606510 52606550 41 TGCACCTTCTATCCTGAATAACTAGCATGGAAAAGTGAATA TGCATCTTCTATCCTGAATAACTAGCATGGAAAAGTGAATA < 41bp 1 0.0438493241774558 1 0.00245791673660278 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 UTP14C ENSG00000253797 UTR3 Human protein_coding chr13:52606530 chr13:52606514 . . 0 hm6A_associated_SNPs_15008 0 0 1 2 52606496 52606518 mRNA hsa-miR-18a ALG11 miRanda miRanda
14034 chr13 52606514 52606514 1 + C T rs540784098 52606530 + 52606510 52606550 41 TGCACCTTCTATCCTGAATAACTAGCATGGAAAAGTGAATA TGCATCTTCTATCCTGAATAACTAGCATGGAAAAGTGAATA < 41bp 1 0.0438493241774558 1 0.00245791673660278 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 UTP14C ENSG00000253797 UTR3 Human protein_coding chr13:52606530 chr13:52606514 . . 0 hm6A_associated_SNPs_15008 0 0 1 2 52606496 52606518 mRNA hsa-miR-18b ALG11 miRanda miRanda
14034 chr13 53050019 53050019 1 + T C rs116458749 53050024 + 53050004 53050044 41 TTAGTGGTTTAACTTTTGTAACTTCACTTGATAGTTTTTAA TTAGTGGTTTAACTTCTGTAACTTCACTTGATAGTTTTTAA < 41bp 1 0.0822523539498351 1 0.0321032702922821 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 CKAP2 ENSG00000136108 UTR3 Human protein_coding chr13:53050024 chr13:53050019 . . 0 hm6A_associated_SNPs_15026 0 0 1 1 53050014 53050035 mRNA hsa-miR-26b CKAP2 miRanda miRanda
14034 chr13 73409415 73409415 1 + C T rs200956787 73409429 + 73409409 73409449 41 AAACTACATGATGAACTAGAACAAATCAGATTGAAAACCAA AAACTATATGATGAACTAGAACAAATCAGATTGAAAACCAA < 41bp 1 0.609785881216038 1 0.980581402778625 experiment 0.780428237567923 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73409429 chr13:73409415 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_15043 0 0 1 1 73409412 73409433 mRNA hsa-miR-375 PIBF1 miRanda miRanda
14034 chr13 73650112 73650112 1 + C A rs9573097 73650098 + 73650078 73650118 41 CTAACTATTCCTGTGTAAAAACAACAAAAACAAACAAAAGC CTAACTATTCCTGTGTAAAAACAACAAAAACAAAAAAAAGC < 41bp 1 0.664837549332175 1 0.982707858085632 experiment 0.67032490133565 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650098 chr13:73650112 . . 0 hm6A_associated_SNPs_15051 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 73650112 73650112 1 + C A rs9573097 73650107 + 73650087 73650127 41 CCTGTGTAAAAACAACAAAAACAAACAAAAGCAAGAAAACC CCTGTGTAAAAACAACAAAAACAAAAAAAAGCAAGAAAACC < 41bp 1 0.660905919966895 1 0.979070663452148 experiment 0.678188160066211 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650107 chr13:73650112 . . 0 hm6A_associated_SNPs_15052 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 73650112 73650112 1 + C A rs9573097 73650111 + 73650091 73650131 41 TGTAAAAACAACAAAAACAAACAAAAGCAAGAAAACCACAA TGTAAAAACAACAAAAACAAAAAAAAGCAAGAAAACCACAA Direct Loss 1 0.627961086690685 1 0.972251176834106 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650111 chr13:73650112 . . 0 hm6A_associated_SNPs_15053 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 73650112 73650112 1 + C A rs9573097 73650125 + 73650105 73650145 41 AAACAAACAAAAGCAAGAAAACCACAACTAAAACTGGAAAT AAACAAAAAAAAGCAAGAAAACCACAACTAAAACTGGAAAT < 41bp 1 0.394257972073397 1 0.959450423717499 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650125 chr13:73650112 . . 0 hm6A_associated_SNPs_15054 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 73650117 73650117 1 + G A rs9573098 73650098 + 73650078 73650118 41 CTAACTATTCCTGTGTAAAAACAACAAAAACAAACAAAAGC CTAACTATTCCTGTGTAAAAACAACAAAAACAAACAAAAAC < 41bp 1 0.667654749359018 1 0.979903817176819 experiment 0.664690501281964 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650098 chr13:73650117 . . 0 hm6A_associated_SNPs_15055 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 73650117 73650117 1 + G A rs9573098 73650107 + 73650087 73650127 41 CCTGTGTAAAAACAACAAAAACAAACAAAAGCAAGAAAACC CCTGTGTAAAAACAACAAAAACAAACAAAAACAAGAAAACC < 41bp 1 0.692511011610736 1 0.972423017024994 experiment 0.614977976778527 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650107 chr13:73650117 . . 0 hm6A_associated_SNPs_15056 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 73650117 73650117 1 + G A rs9573098 73650111 + 73650091 73650131 41 TGTAAAAACAACAAAAACAAACAAAAGCAAGAAAACCACAA TGTAAAAACAACAAAAACAAACAAAAACAAGAAAACCACAA < 41bp 1 0.619626450094739 1 0.964505970478058 experiment 0.760747099810522 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650111 chr13:73650117 . . 0 hm6A_associated_SNPs_15057 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 73650117 73650117 1 + G A rs9573098 73650125 + 73650105 73650145 41 AAACAAACAAAAGCAAGAAAACCACAACTAAAACTGGAAAT AAACAAACAAAAACAAGAAAACCACAACTAAAACTGGAAAT < 41bp 1 0.409664729155408 1 0.946674287319183 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 KLF5 ENSG00000102554 UTR3 Human protein_coding chr13:73650125 chr13:73650117 . . 0 hm6A_associated_SNPs_15058 0 0 1 1 73650109 73650131 mRNA hsa-miR-140-5p KLF5 miRanda miRanda
14034 chr13 78337491 78337491 1 + A G rs139553177 78337495 + 78337475 78337515 41 ACTGCATTGTTTCTCAATGGACCAGTCACCAGAGACTAATT ACTGCATTGTTTCTCAGTGGACCAGTCACCAGAGACTAATT < 41bp 1 0.477265443523077 1 0.821889102458954 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 SLAIN1 ENSG00000139737 UTR3 Human protein_coding chr13:78337495 chr13:78337491 . . 0 hm6A_associated_SNPs_15076 0 0 1 2 78337482 78337504 mRNA hsa-miR-134 SLAIN1 miRanda miRanda
14034 chr13 78337491 78337491 1 + A G rs139553177 78337495 + 78337475 78337515 41 ACTGCATTGTTTCTCAATGGACCAGTCACCAGAGACTAATT ACTGCATTGTTTCTCAGTGGACCAGTCACCAGAGACTAATT < 41bp 1 0.477265443523077 1 0.821889102458954 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 SLAIN1 ENSG00000139737 UTR3 Human protein_coding chr13:78337495 chr13:78337491 . . 0 hm6A_associated_SNPs_15076 0 0 1 2 78337488 78337509 mRNA hsa-miR-330-5p SLAIN1 miRanda miRanda
14034 chr13 78337491 78337491 1 + A G rs139553177 78337509 + 78337489 78337529 41 CAATGGACCAGTCACCAGAGACTAATTATTGCACTTAAATA CAGTGGACCAGTCACCAGAGACTAATTATTGCACTTAAATA < 41bp 1 0.686890551941034 1 0.858088612556458 experiment 0.626218896117932 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 3 SLAIN1 ENSG00000139737 UTR3 Human protein_coding chr13:78337509 chr13:78337491 . . 0 hm6A_associated_SNPs_15077 0 0 1 2 78337482 78337504 mRNA hsa-miR-134 SLAIN1 miRanda miRanda
14034 chr13 78337491 78337491 1 + A G rs139553177 78337509 + 78337489 78337529 41 CAATGGACCAGTCACCAGAGACTAATTATTGCACTTAAATA CAGTGGACCAGTCACCAGAGACTAATTATTGCACTTAAATA < 41bp 1 0.686890551941034 1 0.858088612556458 experiment 0.626218896117932 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 3 SLAIN1 ENSG00000139737 UTR3 Human protein_coding chr13:78337509 chr13:78337491 . . 0 hm6A_associated_SNPs_15077 0 0 1 2 78337488 78337509 mRNA hsa-miR-330-5p SLAIN1 miRanda miRanda
14034 chr13 80125223 80125223 1 + G T rs545263129 80125232 + 80125212 80125252 41 GTATGGCAGCTGCTCATAGAACAAGGTATTTCTTCTTATTG GTATGGCAGCTTCTCATAGAACAAGGTATTTCTTCTTATTG < 41bp 1 0.631110636530166 1 0.058793693780899 experiment 0.737778726939669 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 NDFIP2 ENSG00000102471 CDS Human protein_coding chr13:80125232 chr13:80125223 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_15081 0 0 1 1 80125200 80125223 mRNA hsa-miR-22 NDFIP2 miRanda miRanda
14034 chr13 92006689 92006689 1 + G A rs116733842 92006671 + 92006651 92006691 41 TTTCTTATCCAGTAATGTAAACACAGAGACAGAACATTGAG TTTCTTATCCAGTAATGTAAACACAGAGACAGAACATTAAG < 41bp 1 0.0798197856561576 1 0.0963761210441589 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 MIR17HG ENSG00000215417 ncRNA_exonic Human processed_transcript chr13:92006671 chr13:92006689 . . 0 hm6A_associated_SNPs_15092 0 0 1 3 92006671 92006696 mRNA hsa-miR-181a MIR17HG miRanda miRanda
14034 chr13 92006689 92006689 1 + G A rs116733842 92006671 + 92006651 92006691 41 TTTCTTATCCAGTAATGTAAACACAGAGACAGAACATTGAG TTTCTTATCCAGTAATGTAAACACAGAGACAGAACATTAAG < 41bp 1 0.0798197856561576 1 0.0963761210441589 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 MIR17HG ENSG00000215417 ncRNA_exonic Human processed_transcript chr13:92006671 chr13:92006689 . . 0 hm6A_associated_SNPs_15092 0 0 1 3 92006671 92006696 mRNA hsa-miR-181b MIR17HG miRanda miRanda
14034 chr13 92006689 92006689 1 + G A rs116733842 92006671 + 92006651 92006691 41 TTTCTTATCCAGTAATGTAAACACAGAGACAGAACATTGAG TTTCTTATCCAGTAATGTAAACACAGAGACAGAACATTAAG < 41bp 1 0.0798197856561576 1 0.0963761210441589 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 MIR17HG ENSG00000215417 ncRNA_exonic Human processed_transcript chr13:92006671 chr13:92006689 . . 0 hm6A_associated_SNPs_15092 0 0 1 3 92006671 92006696 mRNA hsa-miR-181d MIR17HG miRanda miRanda
14034 chr13 95279587 95279587 1 + A G rs555271396 95279579 + 95279559 95279599 41 TGCATTTAAGCAGTACCAAGACTGAAAAAAAAGGTAATAAA TGCATTTAAGCAGTACCAAGACTGAAAAGAAAGGTAATAAA < 41bp 1 0.402017100874765 1 0.969085276126862 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 29 GPR180 ENSG00000152749 UTR3 Human protein_coding chr13:95279579 chr13:95279587 . . 0 hm6A_associated_SNPs_15095 0 0 1 1 95279584 95279608 mRNA hsa-miR-181d GPR180 miRanda miRanda
14034 chr13 95281917 95281917 1 + A G rs78015317 95281915 + 95281895 95281935 41 AATTTTTGCTGTTGATTTGAACATTAAAACTGGAATTGTGC AATTTTTGCTGTTGATTTGAACGTTAAAACTGGAATTGTGC Direct Loss 1 0.0344755594871968 1 0.346697509288788 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 23 GPR180 ENSG00000152749 UTR3 Human protein_coding chr13:95281915 chr13:95281917 . . 0 hm6A_associated_SNPs_15097 0 0 1 1 95281907 95281929 mRNA hsa-miR-145 GPR180 miRanda miRanda
14034 chr13 97928202 97928202 1 + G A rs11544959 97928196 + 97928176 97928216 41 TTGAAGTCACTTTATTAATAACAGCTGTATCTGCAAAACAG TTGAAGTCACTTTATTAATAACAGCTATATCTGCAAAACAG < 41bp 1 0.549934937281032 1 0.75623619556427 experiment 0.900130125437937 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 MBNL2 ENSG00000139793 UTR5 Human protein_coding chr13:97928196 chr13:97928202 . . 0 hm6A_associated_SNPs_15111 0 0 1 2 97928187 97928213 mRNA hsa-miR-450a MBNL2 miRanda miRanda
14034 chr13 97928202 97928202 1 + G A rs11544959 97928196 + 97928176 97928216 41 TTGAAGTCACTTTATTAATAACAGCTGTATCTGCAAAACAG TTGAAGTCACTTTATTAATAACAGCTATATCTGCAAAACAG < 41bp 1 0.549934937281032 1 0.75623619556427 experiment 0.900130125437937 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 MBNL2 ENSG00000139793 UTR5 Human protein_coding chr13:97928196 chr13:97928202 . . 0 hm6A_associated_SNPs_15111 0 0 1 2 97928180 97928202 mRNA hsa-miR-590-5p MBNL2 miRanda miRanda
14034 chr13 97928202 97928202 1 + G A rs11544959 97928213 + 97928193 97928233 41 ATAACAGCTGTATCTGCAAAACAGTCAAGAGACTCGGACGT ATAACAGCTATATCTGCAAAACAGTCAAGAGACTCGGACGT < 41bp 1 0.535274497718754 1 0.870963871479034 experiment 0.929451004562491 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 MBNL2 ENSG00000139793 UTR5 Human protein_coding chr13:97928213 chr13:97928202 . . 0 hm6A_associated_SNPs_15112 0 0 1 2 97928187 97928213 mRNA hsa-miR-450a MBNL2 miRanda miRanda
14034 chr13 97928202 97928202 1 + G A rs11544959 97928213 + 97928193 97928233 41 ATAACAGCTGTATCTGCAAAACAGTCAAGAGACTCGGACGT ATAACAGCTATATCTGCAAAACAGTCAAGAGACTCGGACGT < 41bp 1 0.535274497718754 1 0.870963871479034 experiment 0.929451004562491 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 MBNL2 ENSG00000139793 UTR5 Human protein_coding chr13:97928213 chr13:97928202 . . 0 hm6A_associated_SNPs_15112 0 0 1 2 97928180 97928202 mRNA hsa-miR-590-5p MBNL2 miRanda miRanda
14034 chr13 98118705 98118705 1 + T C rs114196679 98118689 + 98118669 98118709 41 TAAAAGTTGGTTTGATTCAAACATGTAGAGAAGTTGTAGAT TAAAAGTTGGTTTGATTCAAACATGTAGAGAAGTTGCAGAT < 41bp 1 0.0591800870316872 1 0.337365508079529 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 RAP2A ENSG00000125249 UTR3 Human protein_coding chr13:98118689 chr13:98118705 . . 0 hm6A_associated_SNPs_15119 0 0 1 1 98118705 98118729 mRNA hsa-miR-539 RAP2A miRanda miRanda
14034 chr13 98674342 98674342 1 + G A rs148623691 98674330 + 98674310 98674350 41 ACTATTTTTCTATTGGTATAACCCGCCCACCTGAAGGGGAA ACTATTTTTCTATTGGTATAACCCGCCCACCTAAAGGGGAA < 41bp 1 0.387538299519272 1 0.981096148490906 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 IPO5 ENSG00000065150 UTR3 Human protein_coding chr13:98674330 chr13:98674342 . . 0 hm6A_associated_SNPs_15125 0 0 1 2 98674335 98674356 mRNA hsa-miR-204 IPO5 miRanda miRanda
14034 chr13 98674342 98674342 1 + G A rs148623691 98674330 + 98674310 98674350 41 ACTATTTTTCTATTGGTATAACCCGCCCACCTGAAGGGGAA ACTATTTTTCTATTGGTATAACCCGCCCACCTAAAGGGGAA < 41bp 1 0.387538299519272 1 0.981096148490906 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 IPO5 ENSG00000065150 UTR3 Human protein_coding chr13:98674330 chr13:98674342 . . 0 hm6A_associated_SNPs_15125 0 0 1 2 98674338 98674356 mRNA hsa-miR-211 IPO5 miRanda miRanda
14034 chr13 98674427 98674427 1 + G A rs142088737 98674414 + 98674394 98674434 41 AAGGAAAAACAGCTTTAAGAACAGTTACTCAGCGTAGATGT AAGGAAAAACAGCTTTAAGAACAGTTACTCAGCATAGATGT < 41bp 1 0.742965161605344 1 0.981026411056519 experiment 0.514069676789313 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 IPO5 ENSG00000065150 UTR3 Human protein_coding chr13:98674414 chr13:98674427 . . 0 hm6A_associated_SNPs_15126 0 0 1 1 98674425 98674446 mRNA hsa-miR-653 IPO5 miRanda miRanda
14034 chr13 98675641 98675641 1 + C A rs9517161 98675635 + 98675615 98675655 41 GGAGTAAAAAGTGTGTCAAGACAACCCCTTTCTGCTTTCTT GGAGTAAAAAGTGTGTCAAGACAACCACTTTCTGCTTTCTT < 41bp 1 0.209185913470327 1 0.797244966030121 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 IPO5 ENSG00000065150 UTR3 Human protein_coding chr13:98675635 chr13:98675641 . . 0 hm6A_associated_SNPs_15129 0 0 1 1 98675641 98675663 mRNA hsa-miR-221 IPO5 miRanda miRanda
14034 chr13 99100890 99100890 1 + G A rs543106438 99100873 + 99100853 99100893 41 CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCGTTC CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCATTC < 41bp 1 0.777783841585159 1 0.906450808048248 experiment 0.444432316829682 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 FARP1 ENSG00000152767 UTR3 Human protein_coding chr13:99100873 chr13:99100890 . . 0 hm6A_associated_SNPs_15130 0 0 1 4 99100868 99100890 mRNA hsa-miR-122 FARP1 miRanda miRanda
14034 chr13 99100890 99100890 1 + G A rs543106438 99100873 + 99100853 99100893 41 CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCGTTC CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCATTC < 41bp 1 0.777783841585159 1 0.906450808048248 experiment 0.444432316829682 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 FARP1 ENSG00000152767 UTR3 Human protein_coding chr13:99100873 chr13:99100890 . . 0 hm6A_associated_SNPs_15130 0 0 1 4 99100886 99100908 mRNA hsa-miR-339-5p FARP1 miRanda miRanda
14034 chr13 99100890 99100890 1 + G A rs543106438 99100873 + 99100853 99100893 41 CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCGTTC CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCATTC < 41bp 1 0.777783841585159 1 0.906450808048248 experiment 0.444432316829682 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 FARP1 ENSG00000152767 UTR3 Human protein_coding chr13:99100873 chr13:99100890 . . 0 hm6A_associated_SNPs_15130 0 0 1 4 99100878 99100898 mRNA hsa-miR-653 FARP1 miRanda miRanda
14034 chr13 99100890 99100890 1 + G A rs543106438 99100873 + 99100853 99100893 41 CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCGTTC CTCCACCCTGCCCCTGAAAAACAGTACACACACATCCATTC < 41bp 1 0.777783841585159 1 0.906450808048248 experiment 0.444432316829682 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 FARP1 ENSG00000152767 UTR3 Human protein_coding chr13:99100873 chr13:99100890 . . 0 hm6A_associated_SNPs_15130 0 0 1 4 99100887 99100910 mRNA hsa-miR-874 FARP1 miRanda miRanda
14034 chr13 103514939 103514939 1 + C T rs4150316 103514921 + 103514901 103514941 41 ACAGACTCAGTTCCAAAAGAACAAATGTCACTTGTTCACGT ACAGACTCAGTTCCAAAAGAACAAATGTCACTTGTTCATGT < 41bp 1 0.794936749123659 1 0.99903666973114 experiment 0.410126501752681 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514921 chr13:103514939 synonymous SNV . 0 hm6A_associated_SNPs_15147 2 0 1 1 103514932 103514955 mRNA hsa-miR-24 ERCC5 miRanda miRanda
14034 chr13 111164563 111164563 1 + T C rs113331483 111164581 + 111164561 111164601 41 CATTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA CACTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA < 41bp 1 0.69988935385023 1 0.980864107608795 experiment 0.600221292299539 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 COL4A2 ENSG00000134871 UTR3 Human protein_coding chr13:111164581 chr13:111164563 . . 0 hm6A_associated_SNPs_15157 1 0 1 4 111164556 111164573 mRNA hsa-miR-29a COL4A2 miRanda miRanda
14034 chr13 111164563 111164563 1 + T C rs113331483 111164581 + 111164561 111164601 41 CATTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA CACTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA < 41bp 1 0.69988935385023 1 0.980864107608795 experiment 0.600221292299539 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 COL4A2 ENSG00000134871 UTR3 Human protein_coding chr13:111164581 chr13:111164563 . . 0 hm6A_associated_SNPs_15157 1 0 1 4 111164551 111164573 mRNA hsa-miR-29b COL4A2 miRanda miRanda
14034 chr13 111164563 111164563 1 + T C rs113331483 111164581 + 111164561 111164601 41 CATTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA CACTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA < 41bp 1 0.69988935385023 1 0.980864107608795 experiment 0.600221292299539 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 COL4A2 ENSG00000134871 UTR3 Human protein_coding chr13:111164581 chr13:111164563 . . 0 hm6A_associated_SNPs_15157 1 0 1 4 111164556 111164573 mRNA hsa-miR-29c COL4A2 miRanda miRanda
14034 chr13 111164563 111164563 1 + T C rs113331483 111164581 + 111164561 111164601 41 CATTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA CACTTTGGTGCTTATTCTTAACTTATTACCTCAGGTGCCAA < 41bp 1 0.69988935385023 1 0.980864107608795 experiment 0.600221292299539 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 COL4A2 ENSG00000134871 UTR3 Human protein_coding chr13:111164581 chr13:111164563 . . 0 hm6A_associated_SNPs_15157 1 0 1 4 111164542 111164563 mRNA hsa-miR-328 COL4A2 miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291024 111291046 mRNA hsa-miR-20a CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291022 111291044 mRNA hsa-miR-130a CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291025 111291046 mRNA hsa-miR-320a CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291017 111291044 mRNA hsa-miR-301a CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291024 111291046 mRNA hsa-miR-20b CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291025 111291046 mRNA hsa-miR-320b CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291027 111291046 mRNA hsa-miR-320c CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291021 111291044 mRNA hsa-miR-454 CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291017 111291044 mRNA hsa-miR-301b CARKD miRanda miRanda
14034 chr13 111291044 111291044 1 + T C rs330564 111291053 + 111291033 111291073 41 ATATTGCAGCTTTTGGTTAAACTTAATGCATGGTTGGAGAT ATATTGCAGCTCTTGGTTAAACTTAATGCATGGTTGGAGAT < 41bp 1 0.746791141685405 1 0.895863056182861 experiment 0.50641771662919 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111291053 chr13:111291044 . . 0 hm6A_associated_SNPs_15160 0 0 1 10 111291028 111291046 mRNA hsa-miR-320d CARKD miRanda miRanda
14034 chr13 111919970 111919970 1 + G A rs79007564 111919956 + 111919936 111919976 41 ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGT ACCTGATGCCACAGATGAAAACCCTGTACCTCACATATTGT < 41bp 1 0.116757971697644 1 0.106694459915161 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111919956 chr13:111919970 nonsynonymous SNV . 0 hm6A_associated_SNPs_15168 0 0 1 3 111919960 111919983 mRNA hsa-miR-32 ARHGEF7 miRanda miRanda
14034 chr13 111919970 111919970 1 + G A rs79007564 111919956 + 111919936 111919976 41 ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGT ACCTGATGCCACAGATGAAAACCCTGTACCTCACATATTGT < 41bp 1 0.116757971697644 1 0.106694459915161 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111919956 chr13:111919970 nonsynonymous SNV . 0 hm6A_associated_SNPs_15168 0 0 1 3 111919961 111919982 mRNA hsa-miR-96 ARHGEF7 miRanda miRanda
14034 chr13 111919970 111919970 1 + G A rs79007564 111919956 + 111919936 111919976 41 ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGT ACCTGATGCCACAGATGAAAACCCTGTACCTCACATATTGT < 41bp 1 0.116757971697644 1 0.106694459915161 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111919956 chr13:111919970 nonsynonymous SNV . 0 hm6A_associated_SNPs_15168 0 0 1 3 111919961 111919982 mRNA hsa-miR-1271 ARHGEF7 miRanda miRanda
14034 chr13 111958005 111958005 1 + A G rs114368226 111958002 + 111957982 111958022 41 TCCTAATTTAAATGTCACAGACAATGTCCTAGTGTTGACTA TCCTAATTTAAATGTCACAGACAGTGTCCTAGTGTTGACTA < 41bp 1 0.480515929412096 1 0.921263456344604 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 24 ARHGEF7 ENSG00000102606 UTR3 Human protein_coding chr13:111958002 chr13:111958005 . . 0 hm6A_associated_SNPs_15171 0 0 1 1 111957999 111958021 mRNA hsa-miR-505 ARHGEF7 miRanda miRanda
14034 chr13 111958005 111958005 1 + A G rs114368226 111958019 + 111957999 111958039 41 CAGACAATGTCCTAGTGTTGACTACTACAATGTTGATGCTA CAGACAGTGTCCTAGTGTTGACTACTACAATGTTGATGCTA < 41bp 1 0.263032765472051 1 0.782634019851685 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 7 ARHGEF7 ENSG00000102606 UTR3 Human protein_coding chr13:111958019 chr13:111958005 . . 0 hm6A_associated_SNPs_15172 0 0 1 1 111957999 111958021 mRNA hsa-miR-505 ARHGEF7 miRanda miRanda
14034 chr13 113918385 113918385 1 + A G rs369031443 113918376 + 113918356 113918396 41 CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTT CAAGGGCCCTTCATGGGTGAACATTAGAAGGAGCCAGGGTT < 41bp 1 0.677811610509804 1 0.968990445137024 experiment 0.644376778980392 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 CUL4A ENSG00000139842 UTR3 Human protein_coding chr13:113918376 chr13:113918385 . . 0 hm6A_associated_SNPs_15189 0 0 1 1 113918368 113918393 mRNA hsa-miR-149 CUL4A miRanda miRanda
14034 chr13 114204369 114204369 1 + G A rs1046518 114204361 + 114204341 114204381 41 CCTATGTTTTCTAAAATGAGACAAATACGGATGTCTATTTG CCTATGTTTTCTAAAATGAGACAAATACAGATGTCTATTTG < 41bp 1 0.493070634457054 1 0.460105121135712 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 TMCO3 ENSG00000150403 UTR3 Human protein_coding chr13:114204361 chr13:114204369 . . 0 hm6A_associated_SNPs_15199 0 0 1 2 114204367 114204386 mRNA hsa-miR-124 TMCO3 miRanda miRanda
14034 chr13 114204369 114204369 1 + G A rs1046518 114204361 + 114204341 114204381 41 CCTATGTTTTCTAAAATGAGACAAATACGGATGTCTATTTG CCTATGTTTTCTAAAATGAGACAAATACAGATGTCTATTTG < 41bp 1 0.493070634457054 1 0.460105121135712 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 TMCO3 ENSG00000150403 UTR3 Human protein_coding chr13:114204361 chr13:114204369 . . 0 hm6A_associated_SNPs_15199 0 0 1 2 114204366 114204386 mRNA hsa-miR-506 TMCO3 miRanda miRanda
14034 chr14 21465080 21465080 1 + C T rs80314558 21465062 + 21465042 21465082 41 AGAGTTGATGAGGATGTGTAACAAGTATTTTCTTCTATCGT AGAGTTGATGAGGATGTGTAACAAGTATTTTCTTCTATTGT < 41bp 1 0.76481231708933 1 0.227321445941925 experiment 0.470375365821341 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 LOC101929718 ENSG00000258471 ncRNA_exonic Human antisense chr14:21465062 chr14:21465080 . . 0 hm6A_associated_SNPs_15220 0 0 1 1 21465062 21465083 mRNA hsa-miR-376c METT11D1 miRanda miRanda
14034 chr14 22934808 22934808 1 + C T rs59433989 22934796 + 22934776 22934816 41 AGGATATAAAAAGATATAGGACTCTTTTTTTACTCCTACAA AGGATATAAAAAGATATAGGACTCTTTTTTTATTCCTACAA < 41bp 1 0.0537569881173662 1 0.624627888202667 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 OR4E1;LINC02332 ENSG00000251002 ncRNA_intronic Human processed_transcript chr14:22934796 chr14:22934808 . . 0 hm6A_associated_SNPs_15237 0 0 0 6 22934807 22934829 mRNA hsa-miR-17 TRD@ miRanda miRanda
14034 chr14 22934808 22934808 1 + C T rs59433989 22934796 + 22934776 22934816 41 AGGATATAAAAAGATATAGGACTCTTTTTTTACTCCTACAA AGGATATAAAAAGATATAGGACTCTTTTTTTATTCCTACAA < 41bp 1 0.0537569881173662 1 0.624627888202667 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 OR4E1;LINC02332 ENSG00000251002 ncRNA_intronic Human processed_transcript chr14:22934796 chr14:22934808 . . 0 hm6A_associated_SNPs_15237 0 0 0 6 22934807 22934829 mRNA hsa-miR-20a TRD@ miRanda miRanda
14034 chr14 22934808 22934808 1 + C T rs59433989 22934796 + 22934776 22934816 41 AGGATATAAAAAGATATAGGACTCTTTTTTTACTCCTACAA AGGATATAAAAAGATATAGGACTCTTTTTTTATTCCTACAA < 41bp 1 0.0537569881173662 1 0.624627888202667 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 OR4E1;LINC02332 ENSG00000251002 ncRNA_intronic Human processed_transcript chr14:22934796 chr14:22934808 . . 0 hm6A_associated_SNPs_15237 0 0 0 6 22934807 22934829 mRNA hsa-miR-93 TRD@ miRanda miRanda
14034 chr14 22934808 22934808 1 + C T rs59433989 22934796 + 22934776 22934816 41 AGGATATAAAAAGATATAGGACTCTTTTTTTACTCCTACAA AGGATATAAAAAGATATAGGACTCTTTTTTTATTCCTACAA < 41bp 1 0.0537569881173662 1 0.624627888202667 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 OR4E1;LINC02332 ENSG00000251002 ncRNA_intronic Human processed_transcript chr14:22934796 chr14:22934808 . . 0 hm6A_associated_SNPs_15237 0 0 0 6 22934807 22934829 mRNA hsa-miR-106a TRD@ miRanda miRanda
14034 chr14 22934808 22934808 1 + C T rs59433989 22934796 + 22934776 22934816 41 AGGATATAAAAAGATATAGGACTCTTTTTTTACTCCTACAA AGGATATAAAAAGATATAGGACTCTTTTTTTATTCCTACAA < 41bp 1 0.0537569881173662 1 0.624627888202667 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 OR4E1;LINC02332 ENSG00000251002 ncRNA_intronic Human processed_transcript chr14:22934796 chr14:22934808 . . 0 hm6A_associated_SNPs_15237 0 0 0 6 22934807 22934829 mRNA hsa-miR-20b TRD@ miRanda miRanda
14034 chr14 22934808 22934808 1 + C T rs59433989 22934796 + 22934776 22934816 41 AGGATATAAAAAGATATAGGACTCTTTTTTTACTCCTACAA AGGATATAAAAAGATATAGGACTCTTTTTTTATTCCTACAA < 41bp 1 0.0537569881173662 1 0.624627888202667 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 OR4E1;LINC02332 ENSG00000251002 ncRNA_intronic Human processed_transcript chr14:22934796 chr14:22934808 . . 0 hm6A_associated_SNPs_15237 0 0 0 6 22934806 22934829 mRNA hsa-miR-519d TRD@ miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRA@ miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAV20 miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRDV2 miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAJ17 miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAC miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRA@ miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAV20 miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRDV2 miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAJ17 miRanda miRanda
14034 chr14 23020842 23020842 1 + C A rs151169555 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCACTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237559880366706 1 0.86128431558609 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020842 . . 0 hm6A_associated_SNPs_15238 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAC miRanda miRanda
14034 chr14 23240328 23240328 1 + T A rs8786 23240339 + 23240319 23240359 41 CCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCAC CCCCCAGCGAGTTGTACATGACCTGGACAAATTACCTCCAC < 41bp 1 0.331838243470112 1 0.630266666412354 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240339 chr14:23240328 synonymous SNV . 0 hm6A_associated_SNPs_15239 0 1 1 1 23240313 23240336 mRNA hsa-miR-505 OXA1L miRanda miRanda
14034 chr14 23240328 23240328 1 + T A rs8786 23240345 + 23240325 23240365 41 GCGTGTTGTACATGACCTGGACAAATTACCTCCACGGGAAG GCGAGTTGTACATGACCTGGACAAATTACCTCCACGGGAAG < 41bp 1 0.794127429597176 1 0.89583158493042 experiment 0.411745140805649 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240345 chr14:23240328 synonymous SNV . 0 hm6A_associated_SNPs_15240 0 1 1 1 23240313 23240336 mRNA hsa-miR-505 OXA1L miRanda miRanda
14034 chr14 23240331 23240331 1 + T C rs147345665 23240339 + 23240319 23240359 41 CCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCAC CCCCCAGCGTGTCGTACATGACCTGGACAAATTACCTCCAC < 41bp 1 0.349575232440724 1 0.652522146701813 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240339 chr14:23240331 synonymous SNV . 0 hm6A_associated_SNPs_15241 0 0 1 1 23240313 23240336 mRNA hsa-miR-505 OXA1L miRanda miRanda
14034 chr14 23240331 23240331 1 + T C rs147345665 23240345 + 23240325 23240365 41 GCGTGTTGTACATGACCTGGACAAATTACCTCCACGGGAAG GCGTGTCGTACATGACCTGGACAAATTACCTCCACGGGAAG < 41bp 1 0.797833726188906 1 0.889435470104218 experiment 0.404332547622188 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240345 chr14:23240331 synonymous SNV . 0 hm6A_associated_SNPs_15242 0 0 1 1 23240313 23240336 mRNA hsa-miR-505 OXA1L miRanda miRanda
14034 chr14 23240781 23240781 1 + C T rs144381763 23240767 + 23240747 23240787 41 TGGCACGACACACTTGGCTGACTTATGTTCTGTGCGCATTC TGGCACGACACACTTGGCTGACTTATGTTCTGTGTGCATTC < 41bp 1 0.598220323099382 1 0.774280726909637 experiment 0.803559353801236 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 OXA1L ENSG00000155463 UTR3 Human protein_coding chr14:23240767 chr14:23240781 . . 0 hm6A_associated_SNPs_15244 0 0 1 1 23240763 23240786 mRNA hsa-miR-183 OXA1L miRanda miRanda
14034 chr14 23780222 23780222 1 + A G rs10149339 23780220 + 23780200 23780240 41 ACCCTACCCTCTACCACAGGACACATATCCCTGTTAGCATT ACCCTACCCTCTACCACAGGACGCATATCCCTGTTAGCATT Direct Loss 1 0.710642131137127 1 0.232434809207916 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 BCL2L2 ENSG00000129473 CDS Human protein_coding chr14:23780220 chr14:23780222 unknown . 0 hm6A_associated_SNPs_15257 0 1 1 1 23780204 23780226 mRNA hsa-miR-455-5p BCL2L2 miRanda miRanda
14034 chr14 24028155 24028155 1 + C T rs374928675 24028141 + 24028121 24028161 41 TCCCCTCAGTGTCCCTTCTGACAGTGACTCCTCTCTCTCCA TCCCCTCAGTGTCCCTTCTGACAGTGACTCCTCTTTCTCCA < 41bp 1 0.448656302711822 1 0.864228665828705 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 35 THTPA ENSG00000157306 ncRNA_exonic Human processed_transcript chr14:24028141 chr14:24028155 . . 0 hm6A_associated_SNPs_15261 0 0 1 1 24028141 24028161 mRNA hsa-miR-185 THTPA miRanda miRanda
14034 chr14 24028159 24028159 1 + C G rs75177523 24028141 + 24028121 24028161 41 TCCCCTCAGTGTCCCTTCTGACAGTGACTCCTCTCTCTCCA TCCCCTCAGTGTCCCTTCTGACAGTGACTCCTCTCTCTGCA < 41bp 1 0.510066766001571 1 0.859182476997375 experiment 0.979866467996858 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 39 THTPA ENSG00000157306 ncRNA_exonic Human processed_transcript chr14:24028141 chr14:24028159 . . 0 hm6A_associated_SNPs_15262 0 0 1 1 24028141 24028161 mRNA hsa-miR-185 THTPA miRanda miRanda
14034 chr14 24105856 24105856 1 + A T rs193164277 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACTCATTTTGGTGACTTTGAAGAGACTGTCACCT < 41bp 1 0.0757576118117851 1 0.980445563793182 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105856 . . 0 hm6A_associated_SNPs_15265 0 0 1 1 24105849 24105871 mRNA hsa-miR-224 DHRS2 miRanda miRanda
14034 chr14 24105857 24105857 1 + C A rs4147557 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACAAATTTTGGTGACTTTGAAGAGACTGTCACCT < 41bp 1 0.079601450938167 1 0.986663997173309 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105857 . . 0 hm6A_associated_SNPs_15266 0 0 1 1 24105849 24105871 mRNA hsa-miR-224 DHRS2 miRanda miRanda
14034 chr14 24105869 24105869 1 + T C rs146405265 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACACATTTTGGTGACCTTGAAGAGACTGTCACCT < 41bp 1 0.0385771393575637 1 0.976157784461975 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 23 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105869 . . 0 hm6A_associated_SNPs_15267 0 0 1 2 24105849 24105871 mRNA hsa-miR-224 DHRS2 miRanda miRanda
14034 chr14 24105869 24105869 1 + T C rs146405265 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACACATTTTGGTGACCTTGAAGAGACTGTCACCT < 41bp 1 0.0385771393575637 1 0.976157784461975 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 23 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105869 . . 0 hm6A_associated_SNPs_15267 0 0 1 2 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105869 24105869 1 + T C rs146405265 24105878 + 24105858 24105898 41 ATTTTGGTGACTTTGAAGAGACTGTCACCTATCACCAAGTG ATTTTGGTGACCTTGAAGAGACTGTCACCTATCACCAAGTG < 41bp 1 0.151336821634896 1 0.995459616184235 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 12 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105878 chr14:24105869 . . 0 hm6A_associated_SNPs_15268 0 0 1 2 24105849 24105871 mRNA hsa-miR-224 DHRS2 miRanda miRanda
14034 chr14 24105869 24105869 1 + T C rs146405265 24105878 + 24105858 24105898 41 ATTTTGGTGACTTTGAAGAGACTGTCACCTATCACCAAGTG ATTTTGGTGACCTTGAAGAGACTGTCACCTATCACCAAGTG < 41bp 1 0.151336821634896 1 0.995459616184235 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 12 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105878 chr14:24105869 . . 0 hm6A_associated_SNPs_15268 0 0 1 2 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105871 24105871 1 + T C rs139756755 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACACATTTTGGTGACTTCGAAGAGACTGTCACCT < 41bp 1 0.0628183232246405 1 0.985473871231079 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 25 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105871 . . 0 hm6A_associated_SNPs_15269 0 0 1 2 24105849 24105871 mRNA hsa-miR-224 DHRS2 miRanda miRanda
14034 chr14 24105871 24105871 1 + T C rs139756755 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACACATTTTGGTGACTTCGAAGAGACTGTCACCT < 41bp 1 0.0628183232246405 1 0.985473871231079 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 25 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105871 . . 0 hm6A_associated_SNPs_15269 0 0 1 2 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105871 24105871 1 + T C rs139756755 24105878 + 24105858 24105898 41 ATTTTGGTGACTTTGAAGAGACTGTCACCTATCACCAAGTG ATTTTGGTGACTTCGAAGAGACTGTCACCTATCACCAAGTG < 41bp 1 0.147373579690193 1 0.996556043624878 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 14 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105878 chr14:24105871 . . 0 hm6A_associated_SNPs_15270 0 0 1 2 24105849 24105871 mRNA hsa-miR-224 DHRS2 miRanda miRanda
14034 chr14 24105871 24105871 1 + T C rs139756755 24105878 + 24105858 24105898 41 ATTTTGGTGACTTTGAAGAGACTGTCACCTATCACCAAGTG ATTTTGGTGACTTCGAAGAGACTGTCACCTATCACCAAGTG < 41bp 1 0.147373579690193 1 0.996556043624878 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 14 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105878 chr14:24105871 . . 0 hm6A_associated_SNPs_15270 0 0 1 2 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105880 24105880 1 + T A rs183196307 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACACATTTTGGTGACTTTGAAGAGACAGTCACCT < 41bp 1 0.072355093641407 1 0.969207406044006 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 34 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105880 . . 0 hm6A_associated_SNPs_15271 0 0 1 1 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105880 24105880 1 + T A rs183196307 24105878 + 24105858 24105898 41 ATTTTGGTGACTTTGAAGAGACTGTCACCTATCACCAAGTG ATTTTGGTGACTTTGAAGAGACAGTCACCTATCACCAAGTG < 41bp 1 0.0931174555420745 1 0.985172271728516 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 23 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105878 chr14:24105880 . . 0 hm6A_associated_SNPs_15272 0 0 1 1 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105884 24105884 1 + A G rs575205406 24105867 + 24105847 24105887 41 ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCACCT ATTCCGTACACATTTTGGTGACTTTGAAGAGACTGTCGCCT < 41bp 1 0.0853009781325666 1 0.98503977060318 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105867 chr14:24105884 . . 0 hm6A_associated_SNPs_15273 0 0 1 1 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105884 24105884 1 + A G rs575205406 24105878 + 24105858 24105898 41 ATTTTGGTGACTTTGAAGAGACTGTCACCTATCACCAAGTG ATTTTGGTGACTTTGAAGAGACTGTCGCCTATCACCAAGTG < 41bp 1 0.146087333772898 1 0.995919406414032 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 27 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105878 chr14:24105884 . . 0 hm6A_associated_SNPs_15274 0 0 1 1 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24105884 24105884 1 + A G rs575205406 24105904 + 24105884 24105924 41 ACCTATCACCAAGTGGTGAGACTATTGCCAAGCAGTGAGAC GCCTATCACCAAGTGGTGAGACTATTGCCAAGCAGTGAGAC < 41bp 1 0.0991865678439318 1 0.99751615524292 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105904 chr14:24105884 . . 0 hm6A_associated_SNPs_15275 0 0 1 1 24105865 24105886 mRNA hsa-miR-542-3p DHRS2 miRanda miRanda
14034 chr14 24112174 24112174 1 + G T rs115100687 24112165 + 24112145 24112185 41 GCTCTGCTCACAGGCCTGTGACTTAGCCTGCCTGCCTATGA GCTCTGCTCACAGGCCTGTGACTTAGCCTTCCTGCCTATGA < 41bp 1 0.0406463802891907 1 0.00199815630912781 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 DHRS2 ENSG00000100867 intronic Human protein_coding chr14:24112165 chr14:24112174 . . 0 hm6A_associated_SNPs_15282 0 0 0 1 24112155 24112179 mRNA hsa-miR-214 DHRS2 miRanda miRanda
14034 chr14 24113725 24113725 1 + A G rs548166479 24113709 + 24113689 24113729 41 CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGGAATTA CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGGGATTA < 41bp 1 0.151475297042911 1 0.0167737305164337 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 37 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113709 chr14:24113725 synonymous SNV . 0 hm6A_associated_SNPs_15284 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113725 24113725 1 + A G rs548166479 24113735 + 24113715 24113755 41 TGGTTCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTG TGGTTCCAGGGATTATCAAAACTGACTTCAGCAAAGTGGTG < 41bp 1 0.140056371376599 1 0.101319074630737 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113735 chr14:24113725 synonymous SNV . 0 hm6A_associated_SNPs_15285 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113725 24113725 1 + A G rs548166479 24113739 + 24113719 24113759 41 TCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA TCCAGGGATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA < 41bp 1 0.191117271408976 1 0.0550559759140015 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 7 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113739 chr14:24113725 synonymous SNV . 0 hm6A_associated_SNPs_15286 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113728 24113728 1 + T G rs114326060 24113709 + 24113689 24113729 41 CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGGAATTA CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGGAATGA < 41bp 1 0.165108690388067 1 0.0200353562831879 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113709 chr14:24113728 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_15287 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113728 24113728 1 + T G rs114326060 24113735 + 24113715 24113755 41 TGGTTCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTG TGGTTCCAGGAATGATCAAAACTGACTTCAGCAAAGTGGTG < 41bp 1 0.131925559075943 1 0.122511953115463 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 14 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113735 chr14:24113728 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_15288 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113728 24113728 1 + T G rs114326060 24113739 + 24113719 24113759 41 TCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA TCCAGGAATGATCAAAACTGACTTCAGCAAAGTGGTGAGGA < 41bp 1 0.194513800171781 1 0.0803137719631195 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113739 chr14:24113728 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_15289 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24114054 24114054 1 + C T rs112044307 24114064 + 24114044 24114084 41 GAATGAGTCTCTCTGGAAGAACTTCAAGGAACATCATCAGC GAATGAGTCTTTCTGGAAGAACTTCAAGGAACATCATCAGC < 41bp 1 0.152216475087939 1 0.848698258399963 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 11 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114064 chr14:24114054 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_15290 0 0 1 2 24114036 24114057 mRNA hsa-miR-146a DHRS2 miRanda miRanda
14034 chr14 24114054 24114054 1 + C T rs112044307 24114064 + 24114044 24114084 41 GAATGAGTCTCTCTGGAAGAACTTCAAGGAACATCATCAGC GAATGAGTCTTTCTGGAAGAACTTCAAGGAACATCATCAGC < 41bp 1 0.152216475087939 1 0.848698258399963 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 11 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114064 chr14:24114054 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_15290 0 0 1 2 24114036 24114057 mRNA hsa-miR-146b-5p DHRS2 miRanda miRanda
14034 chr14 24114054 24114054 1 + C T rs112044307 24114074 + 24114054 24114094 41 CTCTGGAAGAACTTCAAGGAACATCATCAGCTGCAGAGGCA TTCTGGAAGAACTTCAAGGAACATCATCAGCTGCAGAGGCA < 41bp 1 0.343974777293514 1 0.795728921890259 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114074 chr14:24114054 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_15291 0 0 1 2 24114036 24114057 mRNA hsa-miR-146a DHRS2 miRanda miRanda
14034 chr14 24114054 24114054 1 + C T rs112044307 24114074 + 24114054 24114094 41 CTCTGGAAGAACTTCAAGGAACATCATCAGCTGCAGAGGCA TTCTGGAAGAACTTCAAGGAACATCATCAGCTGCAGAGGCA < 41bp 1 0.343974777293514 1 0.795728921890259 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114074 chr14:24114054 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_15291 0 0 1 2 24114036 24114057 mRNA hsa-miR-146b-5p DHRS2 miRanda miRanda
14034 chr14 24438106 24438106 1 + G C rs375763714 24438091 + 24438071 24438111 41 CCGCCTCTGAGGACCGGGAGACAGCCCACAGGCCAGAGTTG CCGCCTCTGAGGACCGGGAGACAGCCCACAGGCCACAGTTG < 41bp 1 0.146676520561206 1 0.117683619260788 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 36 DHRS4 ENSG00000215256 ncRNA_intronic Human antisense chr14:24438091 chr14:24438106 . . 0 hm6A_associated_SNPs_15299 0 0 0 2 24438105 24438125 mRNA hsa-miR-28-5p DHRS4 miRanda miRanda
14034 chr14 24438106 24438106 1 + G C rs375763714 24438091 + 24438071 24438111 41 CCGCCTCTGAGGACCGGGAGACAGCCCACAGGCCAGAGTTG CCGCCTCTGAGGACCGGGAGACAGCCCACAGGCCACAGTTG < 41bp 1 0.146676520561206 1 0.117683619260788 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 36 DHRS4 ENSG00000215256 ncRNA_intronic Human antisense chr14:24438091 chr14:24438106 . . 0 hm6A_associated_SNPs_15299 0 0 0 2 24438104 24438125 mRNA hsa-miR-708 DHRS4 miRanda miRanda
14034 chr14 24573292 24573292 1 + C G rs569631551 24573287 + 24573267 24573307 41 ACATCTTCAATGTGCCATAGACCTTCCCACAAAGACTGTCC ACATCTTCAATGTGCCATAGACCTTGCCACAAAGACTGTCC < 41bp 1 0.2924982122724 1 0.78633040189743 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 PCK2 ENSG00000100889 UTR3 Human protein_coding chr14:24573287 chr14:24573292 . . 0 hm6A_associated_SNPs_15304 0 0 1 3 24573287 24573307 mRNA hsa-miR-212 PCK2 miRanda miRanda
14034 chr14 24573292 24573292 1 + C G rs569631551 24573287 + 24573267 24573307 41 ACATCTTCAATGTGCCATAGACCTTCCCACAAAGACTGTCC ACATCTTCAATGTGCCATAGACCTTGCCACAAAGACTGTCC < 41bp 1 0.2924982122724 1 0.78633040189743 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 PCK2 ENSG00000100889 UTR3 Human protein_coding chr14:24573287 chr14:24573292 . . 0 hm6A_associated_SNPs_15304 0 0 1 3 24573286 24573307 mRNA hsa-miR-132 PCK2 miRanda miRanda
14034 chr14 24573292 24573292 1 + C G rs569631551 24573287 + 24573267 24573307 41 ACATCTTCAATGTGCCATAGACCTTCCCACAAAGACTGTCC ACATCTTCAATGTGCCATAGACCTTGCCACAAAGACTGTCC < 41bp 1 0.2924982122724 1 0.78633040189743 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 PCK2 ENSG00000100889 UTR3 Human protein_coding chr14:24573287 chr14:24573292 . . 0 hm6A_associated_SNPs_15304 0 0 1 3 24573278 24573299 mRNA hsa-miR-299-3p PCK2 miRanda miRanda
14034 chr14 24573292 24573292 1 + C G rs569631551 24573301 + 24573281 24573321 41 CCATAGACCTTCCCACAAAGACTGTCCAATAATAAGAGATG CCATAGACCTTGCCACAAAGACTGTCCAATAATAAGAGATG < 41bp 1 0.576489248725256 1 0.892668664455414 experiment 0.847021502549488 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 PCK2 ENSG00000100889 UTR3 Human protein_coding chr14:24573301 chr14:24573292 . . 0 hm6A_associated_SNPs_15305 0 0 1 3 24573287 24573307 mRNA hsa-miR-212 PCK2 miRanda miRanda
14034 chr14 24573292 24573292 1 + C G rs569631551 24573301 + 24573281 24573321 41 CCATAGACCTTCCCACAAAGACTGTCCAATAATAAGAGATG CCATAGACCTTGCCACAAAGACTGTCCAATAATAAGAGATG < 41bp 1 0.576489248725256 1 0.892668664455414 experiment 0.847021502549488 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 PCK2 ENSG00000100889 UTR3 Human protein_coding chr14:24573301 chr14:24573292 . . 0 hm6A_associated_SNPs_15305 0 0 1 3 24573286 24573307 mRNA hsa-miR-132 PCK2 miRanda miRanda
14034 chr14 24573292 24573292 1 + C G rs569631551 24573301 + 24573281 24573321 41 CCATAGACCTTCCCACAAAGACTGTCCAATAATAAGAGATG CCATAGACCTTGCCACAAAGACTGTCCAATAATAAGAGATG < 41bp 1 0.576489248725256 1 0.892668664455414 experiment 0.847021502549488 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 PCK2 ENSG00000100889 UTR3 Human protein_coding chr14:24573301 chr14:24573292 . . 0 hm6A_associated_SNPs_15305 0 0 1 3 24573278 24573299 mRNA hsa-miR-299-3p PCK2 miRanda miRanda
14034 chr14 29237968 29237968 1 + C A rs151157846 29237966 + 29237946 29237986 41 AATACATTAACATCCCTGGGACCAGACTGTAAGTGAACGTT AATACATTAACATCCCTGGGACAAGACTGTAAGTGAACGTT < 41bp 1 0.533722545568519 1 0.987800180912018 experiment 0.932554908862962 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 23 FOXG1 ENSG00000176165 UTR3 Human protein_coding chr14:29237966 chr14:29237968 . . 0 hm6A_associated_SNPs_15339 1 0 1 2 29237956 29237971 mRNA hsa-miR-133a FOXG1 miRanda miRanda
14034 chr14 29237968 29237968 1 + C A rs151157846 29237966 + 29237946 29237986 41 AATACATTAACATCCCTGGGACCAGACTGTAAGTGAACGTT AATACATTAACATCCCTGGGACAAGACTGTAAGTGAACGTT < 41bp 1 0.533722545568519 1 0.987800180912018 experiment 0.932554908862962 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 23 FOXG1 ENSG00000176165 UTR3 Human protein_coding chr14:29237966 chr14:29237968 . . 0 hm6A_associated_SNPs_15339 1 0 1 2 29237956 29237971 mRNA hsa-miR-133b FOXG1 miRanda miRanda
14034 chr14 29237968 29237968 1 + C A rs151157846 29237971 + 29237951 29237991 41 ATTAACATCCCTGGGACCAGACTGTAAGTGAACGTTTTACA ATTAACATCCCTGGGACAAGACTGTAAGTGAACGTTTTACA < 41bp 1 0.504408298717403 1 0.984816789627075 experiment 0.991183402565195 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 FOXG1 ENSG00000176165 UTR3 Human protein_coding chr14:29237971 chr14:29237968 . . 0 hm6A_associated_SNPs_15340 1 0 1 2 29237956 29237971 mRNA hsa-miR-133a FOXG1 miRanda miRanda
14034 chr14 29237968 29237968 1 + C A rs151157846 29237971 + 29237951 29237991 41 ATTAACATCCCTGGGACCAGACTGTAAGTGAACGTTTTACA ATTAACATCCCTGGGACAAGACTGTAAGTGAACGTTTTACA < 41bp 1 0.504408298717403 1 0.984816789627075 experiment 0.991183402565195 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 FOXG1 ENSG00000176165 UTR3 Human protein_coding chr14:29237971 chr14:29237968 . . 0 hm6A_associated_SNPs_15340 1 0 1 2 29237956 29237971 mRNA hsa-miR-133b FOXG1 miRanda miRanda
14034 chr14 31086502 31086502 1 + G C rs114508975 31086504 + 31086484 31086524 41 AAATTTTCTGGAATCTATGGACATTCCATGAGCTTAAACAC AAATTTTCTGGAATCTATCGACATTCCATGAGCTTAAACAC Direct Loss 1 0.28826913840271 1 0.107554167509079 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 G2E3 ENSG00000092140 UTR3 Human protein_coding chr14:31086504 chr14:31086502 . . 0 hm6A_associated_SNPs_15342 0 0 1 3 31086490 31086511 mRNA hsa-miR-1 G2E3 miRanda miRanda
14034 chr14 31086502 31086502 1 + G C rs114508975 31086504 + 31086484 31086524 41 AAATTTTCTGGAATCTATGGACATTCCATGAGCTTAAACAC AAATTTTCTGGAATCTATCGACATTCCATGAGCTTAAACAC Direct Loss 1 0.28826913840271 1 0.107554167509079 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 G2E3 ENSG00000092140 UTR3 Human protein_coding chr14:31086504 chr14:31086502 . . 0 hm6A_associated_SNPs_15342 0 0 1 3 31086490 31086511 mRNA hsa-miR-206 G2E3 miRanda miRanda
14034 chr14 31086502 31086502 1 + G C rs114508975 31086504 + 31086484 31086524 41 AAATTTTCTGGAATCTATGGACATTCCATGAGCTTAAACAC AAATTTTCTGGAATCTATCGACATTCCATGAGCTTAAACAC Direct Loss 1 0.28826913840271 1 0.107554167509079 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 G2E3 ENSG00000092140 UTR3 Human protein_coding chr14:31086504 chr14:31086502 . . 0 hm6A_associated_SNPs_15342 0 0 1 3 31086492 31086511 mRNA hsa-miR-613 G2E3 miRanda miRanda
14034 chr14 31086502 31086502 1 + G C rs114508975 31086521 + 31086501 31086541 41 TGGACATTCCATGAGCTTAAACACTTTTGAGGTGGATAACA TCGACATTCCATGAGCTTAAACACTTTTGAGGTGGATAACA < 41bp 1 0.169778671325368 1 0.0114345848560333 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 2 G2E3 ENSG00000092140 UTR3 Human protein_coding chr14:31086521 chr14:31086502 . . 0 hm6A_associated_SNPs_15343 0 0 1 3 31086490 31086511 mRNA hsa-miR-1 G2E3 miRanda miRanda
14034 chr14 31086502 31086502 1 + G C rs114508975 31086521 + 31086501 31086541 41 TGGACATTCCATGAGCTTAAACACTTTTGAGGTGGATAACA TCGACATTCCATGAGCTTAAACACTTTTGAGGTGGATAACA < 41bp 1 0.169778671325368 1 0.0114345848560333 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 2 G2E3 ENSG00000092140 UTR3 Human protein_coding chr14:31086521 chr14:31086502 . . 0 hm6A_associated_SNPs_15343 0 0 1 3 31086490 31086511 mRNA hsa-miR-206 G2E3 miRanda miRanda
14034 chr14 31086502 31086502 1 + G C rs114508975 31086521 + 31086501 31086541 41 TGGACATTCCATGAGCTTAAACACTTTTGAGGTGGATAACA TCGACATTCCATGAGCTTAAACACTTTTGAGGTGGATAACA < 41bp 1 0.169778671325368 1 0.0114345848560333 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 2 G2E3 ENSG00000092140 UTR3 Human protein_coding chr14:31086521 chr14:31086502 . . 0 hm6A_associated_SNPs_15343 0 0 1 3 31086492 31086511 mRNA hsa-miR-613 G2E3 miRanda miRanda
14034 chr14 31359234 31359234 1 + G C rs190142757 31359229 + 31359209 31359249 41 CATAATCATGGCTCTTAGAAACTCAGGAAAGAGGAGATAAT CATAATCATGGCTCTTAGAAACTCACGAAAGAGGAGATAAT < 41bp 1 0.152562851090224 1 0.118450194597244 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 COCH ENSG00000100473 UTR3 Human protein_coding chr14:31359229 chr14:31359234 . . 0 hm6A_associated_SNPs_15354 0 0 1 2 31359234 31359254 mRNA hsa-miR-23a COCH miRanda miRanda
14034 chr14 31359234 31359234 1 + G C rs190142757 31359229 + 31359209 31359249 41 CATAATCATGGCTCTTAGAAACTCAGGAAAGAGGAGATAAT CATAATCATGGCTCTTAGAAACTCACGAAAGAGGAGATAAT < 41bp 1 0.152562851090224 1 0.118450194597244 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 COCH ENSG00000100473 UTR3 Human protein_coding chr14:31359229 chr14:31359234 . . 0 hm6A_associated_SNPs_15354 0 0 1 2 31359234 31359254 mRNA hsa-miR-23b COCH miRanda miRanda
14034 chr14 31359560 31359560 1 + T A rs575682842 31359578 + 31359558 31359598 41 TGTTTTCATAACAACTTATGACTAAAAATATCACACTGAAT TGATTTCATAACAACTTATGACTAAAAATATCACACTGAAT < 41bp 1 0.123484536232616 1 0.0292289555072784 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 COCH ENSG00000100473 UTR3 Human protein_coding chr14:31359578 chr14:31359560 . . 0 hm6A_associated_SNPs_15355 0 0 1 1 31359555 31359575 mRNA hsa-miR-382 COCH miRanda miRanda
14034 chr14 35550528 35550528 1 + T C rs184025379 35550514 + 35550494 35550534 41 CACATTCTTTATTCAGTGGGACTTAATACAATTATTTATAT CACATTCTTTATTCAGTGGGACTTAATACAATTACTTATAT < 41bp 1 0.748105827740619 1 0.919923543930054 experiment 0.503788344518763 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 LOC101927178 ENSG00000151327 UTR3 Human protein_coding chr14:35550514 chr14:35550528 . . 0 hm6A_associated_SNPs_15364 0 0 1 2 35550513 35550534 mRNA hsa-miR-340 FAM177A1 miRanda miRanda
14034 chr14 35550528 35550528 1 + T C rs184025379 35550514 + 35550494 35550534 41 CACATTCTTTATTCAGTGGGACTTAATACAATTATTTATAT CACATTCTTTATTCAGTGGGACTTAATACAATTACTTATAT < 41bp 1 0.748105827740619 1 0.919923543930054 experiment 0.503788344518763 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 LOC101927178 ENSG00000151327 UTR3 Human protein_coding chr14:35550514 chr14:35550528 . . 0 hm6A_associated_SNPs_15364 0 0 1 2 35550515 35550535 mRNA hsa-miR-410 FAM177A1 miRanda miRanda
14034 chr14 35550985 35550985 1 + T C rs182873307 35550990 + 35550970 35551010 41 TGTAAGAATCTGTATTTATAACACCAGATATTAAGATAGGC TGTAAGAATCTGTATCTATAACACCAGATATTAAGATAGGC < 41bp 1 0.0618398526107335 1 0.0101687610149384 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 LOC101927178 ENSG00000151327 UTR3 Human protein_coding chr14:35550990 chr14:35550985 . . 0 hm6A_associated_SNPs_15365 0 0 1 1 35550978 35551002 mRNA hsa-miR-429 FAM177A1 miRanda miRanda
14034 chr14 39651193 39651193 1 + A G rs532 39651200 + 39651180 39651220 41 AATCTTTTTGGAAAATACAGACTGTTTGTTTACCAGACATT AATCTTTTTGGAAGATACAGACTGTTTGTTTACCAGACATT < 41bp 1 0.776942935172298 1 0.984371185302734 experiment 0.446114129655405 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 14 PNN ENSG00000100941 UTR3 Human protein_coding chr14:39651200 chr14:39651193 . . 0 hm6A_associated_SNPs_15374 0 0 1 6 39651193 39651213 mRNA hsa-miR-30a PNN miRanda miRanda
14034 chr14 39651193 39651193 1 + A G rs532 39651200 + 39651180 39651220 41 AATCTTTTTGGAAAATACAGACTGTTTGTTTACCAGACATT AATCTTTTTGGAAGATACAGACTGTTTGTTTACCAGACATT < 41bp 1 0.776942935172298 1 0.984371185302734 experiment 0.446114129655405 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 14 PNN ENSG00000100941 UTR3 Human protein_coding chr14:39651200 chr14:39651193 . . 0 hm6A_associated_SNPs_15374 0 0 1 6 39651193 39651213 mRNA hsa-miR-30d PNN miRanda miRanda
14034 chr14 39651193 39651193 1 + A G rs532 39651200 + 39651180 39651220 41 AATCTTTTTGGAAAATACAGACTGTTTGTTTACCAGACATT AATCTTTTTGGAAGATACAGACTGTTTGTTTACCAGACATT < 41bp 1 0.776942935172298 1 0.984371185302734 experiment 0.446114129655405 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 14 PNN ENSG00000100941 UTR3 Human protein_coding chr14:39651200 chr14:39651193 . . 0 hm6A_associated_SNPs_15374 0 0 1 6 39651186 39651206 mRNA hsa-miR-212 PNN miRanda miRanda
14034 chr14 39651193 39651193 1 + A G rs532 39651200 + 39651180 39651220 41 AATCTTTTTGGAAAATACAGACTGTTTGTTTACCAGACATT AATCTTTTTGGAAGATACAGACTGTTTGTTTACCAGACATT < 41bp 1 0.776942935172298 1 0.984371185302734 experiment 0.446114129655405 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 14 PNN ENSG00000100941 UTR3 Human protein_coding chr14:39651200 chr14:39651193 . . 0 hm6A_associated_SNPs_15374 0 0 1 6 39651185 39651206 mRNA hsa-miR-132 PNN miRanda miRanda
14034 chr14 39651193 39651193 1 + A G rs532 39651200 + 39651180 39651220 41 AATCTTTTTGGAAAATACAGACTGTTTGTTTACCAGACATT AATCTTTTTGGAAGATACAGACTGTTTGTTTACCAGACATT < 41bp 1 0.776942935172298 1 0.984371185302734 experiment 0.446114129655405 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 14 PNN ENSG00000100941 UTR3 Human protein_coding chr14:39651200 chr14:39651193 . . 0 hm6A_associated_SNPs_15374 0 0 1 6 39651193 39651213 mRNA hsa-miR-30e PNN miRanda miRanda
14034 chr14 39651193 39651193 1 + A G rs532 39651200 + 39651180 39651220 41 AATCTTTTTGGAAAATACAGACTGTTTGTTTACCAGACATT AATCTTTTTGGAAGATACAGACTGTTTGTTTACCAGACATT < 41bp 1 0.776942935172298 1 0.984371185302734 experiment 0.446114129655405 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 14 PNN ENSG00000100941 UTR3 Human protein_coding chr14:39651200 chr14:39651193 . . 0 hm6A_associated_SNPs_15374 0 0 1 6 39651189 39651210 mRNA hsa-miR-495 PNN miRanda miRanda
14034 chr14 39651521 39651521 1 + A G rs139918138 39651519 + 39651499 39651539 41 TTTATCATTTTCAGCTTTTAACACTAGATACTGCACGTGAT TTTATCATTTTCAGCTTTTAACGCTAGATACTGCACGTGAT Direct Loss 1 0.261001356694404 1 0.53380686044693 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 PNN ENSG00000100941 UTR3 Human protein_coding chr14:39651519 chr14:39651521 . . 0 hm6A_associated_SNPs_15375 0 0 1 1 39651504 39651526 mRNA hsa-miR-142-3p PNN miRanda miRanda
14034 chr14 45542802 45542802 1 + T C rs537139964 45542791 + 45542771 45542811 41 GATAAAATACTGTATGATGAACAAAAGTGTTTACATGATGA GATAAAATACTGTATGATGAACAAAAGTGTTCACATGATGA < 41bp 1 0.454296755218103 1 0.798727869987488 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 32 TOGARAM1 ENSG00000198718 UTR3 Human protein_coding chr14:45542791 chr14:45542802 . . 0 hm6A_associated_SNPs_15380 0 0 1 5 45542784 45542805 mRNA hsa-miR-30a FAM179B miRanda miRanda
14034 chr14 45542802 45542802 1 + T C rs537139964 45542791 + 45542771 45542811 41 GATAAAATACTGTATGATGAACAAAAGTGTTTACATGATGA GATAAAATACTGTATGATGAACAAAAGTGTTCACATGATGA < 41bp 1 0.454296755218103 1 0.798727869987488 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 32 TOGARAM1 ENSG00000198718 UTR3 Human protein_coding chr14:45542791 chr14:45542802 . . 0 hm6A_associated_SNPs_15380 0 0 1 5 45542783 45542805 mRNA hsa-miR-30c FAM179B miRanda miRanda
14034 chr14 45542802 45542802 1 + T C rs537139964 45542791 + 45542771 45542811 41 GATAAAATACTGTATGATGAACAAAAGTGTTTACATGATGA GATAAAATACTGTATGATGAACAAAAGTGTTCACATGATGA < 41bp 1 0.454296755218103 1 0.798727869987488 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 32 TOGARAM1 ENSG00000198718 UTR3 Human protein_coding chr14:45542791 chr14:45542802 . . 0 hm6A_associated_SNPs_15380 0 0 1 5 45542784 45542805 mRNA hsa-miR-30d FAM179B miRanda miRanda
14034 chr14 45542802 45542802 1 + T C rs537139964 45542791 + 45542771 45542811 41 GATAAAATACTGTATGATGAACAAAAGTGTTTACATGATGA GATAAAATACTGTATGATGAACAAAAGTGTTCACATGATGA < 41bp 1 0.454296755218103 1 0.798727869987488 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 32 TOGARAM1 ENSG00000198718 UTR3 Human protein_coding chr14:45542791 chr14:45542802 . . 0 hm6A_associated_SNPs_15380 0 0 1 5 45542784 45542805 mRNA hsa-miR-30b FAM179B miRanda miRanda
14034 chr14 45542802 45542802 1 + T C rs537139964 45542791 + 45542771 45542811 41 GATAAAATACTGTATGATGAACAAAAGTGTTTACATGATGA GATAAAATACTGTATGATGAACAAAAGTGTTCACATGATGA < 41bp 1 0.454296755218103 1 0.798727869987488 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 32 TOGARAM1 ENSG00000198718 UTR3 Human protein_coding chr14:45542791 chr14:45542802 . . 0 hm6A_associated_SNPs_15380 0 0 1 5 45542784 45542805 mRNA hsa-miR-30e FAM179B miRanda miRanda
14034 chr14 50361074 50361074 1 + C T rs112211624 50361092 + 50361072 50361112 41 TTCTCTTCTTTTGAATTTGAACTCTGGAGTTACTGTTCTAC TTTTCTTCTTTTGAATTTGAACTCTGGAGTTACTGTTCTAC < 41bp 1 0.634470320318939 1 0.971142530441284 experiment 0.731059359362121 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 3 ARF6 ENSG00000165527 UTR3 Human protein_coding chr14:50361092 chr14:50361074 . . 0 hm6A_associated_SNPs_15401 0 0 1 1 50361051 50361074 mRNA hsa-miR-93 ARF6 miRanda miRanda
14034 chr14 50361231 50361231 1 + A T rs537919229 50361224 + 50361204 50361244 41 CGTTAGGATGCTCTGATCTGACATTTGACATGAACACAAAG CGTTAGGATGCTCTGATCTGACATTTGTCATGAACACAAAG < 41bp 1 0.63054135836962 1 0.772771596908569 experiment 0.73891728326076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 ARF6 ENSG00000165527 UTR3 Human protein_coding chr14:50361224 chr14:50361231 . . 0 hm6A_associated_SNPs_15403 0 0 1 1 50361220 50361245 mRNA hsa-miR-9 ARF6 miRanda miRanda
14034 chr14 50361231 50361231 1 + A T rs537919229 50361237 + 50361217 50361257 41 TGATCTGACATTTGACATGAACACAAAGTTGCTAGATGCTC TGATCTGACATTTGTCATGAACACAAAGTTGCTAGATGCTC < 41bp 1 0.647569537389065 1 0.809830665588379 experiment 0.704860925221871 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 ARF6 ENSG00000165527 UTR3 Human protein_coding chr14:50361237 chr14:50361231 . . 0 hm6A_associated_SNPs_15404 0 0 1 1 50361220 50361245 mRNA hsa-miR-9 ARF6 miRanda miRanda
14034 chr14 50361752 50361752 1 + C G rs190716215 50361760 + 50361740 50361780 41 AGTTCCCCATAACGTAGATAACTTAATGCTGCATAAAAATA AGTTCCCCATAAGGTAGATAACTTAATGCTGCATAAAAATA < 41bp 1 0.0672839252909669 1 0.289477109909058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ARF6 ENSG00000165527 downstream Human protein_coding chr14:50361760 chr14:50361752 . . 0 hm6A_associated_SNPs_15405 0 0 1 3 50361746 50361772 mRNA hsa-miR-103 ARF6 miRanda miRanda
14034 chr14 50361752 50361752 1 + C G rs190716215 50361760 + 50361740 50361780 41 AGTTCCCCATAACGTAGATAACTTAATGCTGCATAAAAATA AGTTCCCCATAAGGTAGATAACTTAATGCTGCATAAAAATA < 41bp 1 0.0672839252909669 1 0.289477109909058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ARF6 ENSG00000165527 downstream Human protein_coding chr14:50361760 chr14:50361752 . . 0 hm6A_associated_SNPs_15405 0 0 1 3 50361746 50361772 mRNA hsa-miR-107 ARF6 miRanda miRanda
14034 chr14 50361752 50361752 1 + C G rs190716215 50361760 + 50361740 50361780 41 AGTTCCCCATAACGTAGATAACTTAATGCTGCATAAAAATA AGTTCCCCATAAGGTAGATAACTTAATGCTGCATAAAAATA < 41bp 1 0.0672839252909669 1 0.289477109909058 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ARF6 ENSG00000165527 downstream Human protein_coding chr14:50361760 chr14:50361752 . . 0 hm6A_associated_SNPs_15405 0 0 1 3 50361749 50361772 mRNA hsa-miR-338-3p ARF6 miRanda miRanda
14034 chr14 50362183 50362183 1 + A G rs145059127 50362184 + 50362164 50362204 41 CCGCATCTCCATCAATTAGAACACTGGAAAAGATGTTTTAT CCGCATCTCCATCAATTAGGACACTGGAAAAGATGTTTTAT < 41bp 1 0.287572120815975 1 0.920834422111511 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ARF6 ENSG00000165527 downstream Human protein_coding chr14:50362184 chr14:50362183 . . 0 hm6A_associated_SNPs_15406 0 0 1 3 50362169 50362191 mRNA hsa-miR-199a-5p ARF6 miRanda miRanda
14034 chr14 50362183 50362183 1 + A G rs145059127 50362184 + 50362164 50362204 41 CCGCATCTCCATCAATTAGAACACTGGAAAAGATGTTTTAT CCGCATCTCCATCAATTAGGACACTGGAAAAGATGTTTTAT < 41bp 1 0.287572120815975 1 0.920834422111511 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ARF6 ENSG00000165527 downstream Human protein_coding chr14:50362184 chr14:50362183 . . 0 hm6A_associated_SNPs_15406 0 0 1 3 50362168 50362191 mRNA hsa-miR-199b-5p ARF6 miRanda miRanda
14034 chr14 50362183 50362183 1 + A G rs145059127 50362184 + 50362164 50362204 41 CCGCATCTCCATCAATTAGAACACTGGAAAAGATGTTTTAT CCGCATCTCCATCAATTAGGACACTGGAAAAGATGTTTTAT < 41bp 1 0.287572120815975 1 0.920834422111511 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ARF6 ENSG00000165527 downstream Human protein_coding chr14:50362184 chr14:50362183 . . 0 hm6A_associated_SNPs_15406 0 0 1 3 50362170 50362192 mRNA hsa-miR-145 ARF6 miRanda miRanda
14034 chr14 50362674 50362674 1 + T G rs1064615 50362691 + 50362671 50362711 41 GTTTATGAGGGTGTCTGAAAACTAAAATTGAGCGGGATATC GTTGATGAGGGTGTCTGAAAACTAAAATTGAGCGGGATATC < 41bp 1 0.166871627441649 1 0.172095119953156 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 ARF6 ENSG00000165527;ENSG00000251929 intergenic Human other chr14:50362691 chr14:50362674 . . 0 hm6A_associated_SNPs_15407 0 0 1 1 50362652 50362674 mRNA hsa-miR-495 ARF6 miRanda miRanda
14034 chr14 50362984 50362984 1 + A C rs570343509 50362997 + 50362977 50363017 41 GCTGATAAACACATCTAAGAACACTGGTTGCTTTCTAAAAT GCTGATACACACATCTAAGAACACTGGTTGCTTTCTAAAAT < 41bp 1 0.437355236508574 1 0.236371964216232 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 ARF6 ENSG00000165527;ENSG00000251929 intergenic Human other chr14:50362997 chr14:50362984 . . 0 hm6A_associated_SNPs_15408 0 0 1 2 50362980 50363004 mRNA hsa-miR-199a-5p ARF6 miRanda miRanda
14034 chr14 50362984 50362984 1 + A C rs570343509 50362997 + 50362977 50363017 41 GCTGATAAACACATCTAAGAACACTGGTTGCTTTCTAAAAT GCTGATACACACATCTAAGAACACTGGTTGCTTTCTAAAAT < 41bp 1 0.437355236508574 1 0.236371964216232 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 ARF6 ENSG00000165527;ENSG00000251929 intergenic Human other chr14:50362997 chr14:50362984 . . 0 hm6A_associated_SNPs_15408 0 0 1 2 50362983 50363004 mRNA hsa-miR-199b-5p ARF6 miRanda miRanda
14034 chr14 51368610 51368610 1 + A G rs28564871 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAGTCTTTCCTAATG < 41bp 1 0.500717288224696 1 0.298608332872391 experiment 0.998565423550609 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368610 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_15409 0 0 0 2 51368606 51368627 mRNA hsa-miR-23a ABHD12B miRanda miRanda
14034 chr14 51368610 51368610 1 + A G rs28564871 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAGTCTTTCCTAATG < 41bp 1 0.500717288224696 1 0.298608332872391 experiment 0.998565423550609 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368610 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_15409 0 0 0 2 51368606 51368627 mRNA hsa-miR-23b ABHD12B miRanda miRanda
14034 chr14 52194950 52194950 1 + G T rs111955691 52194960 + 52194940 52194980 41 TACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACT TACAGAAAATTTACAGCAAGACAAGTGCCCGGAAGTTCACT < 41bp 1 0.630535531253074 1 0.971532821655273 experiment 0.738928937493853 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 FRMD6 ENSG00000139926 UTR3 Human protein_coding chr14:52194960 chr14:52194950 . . 0 hm6A_associated_SNPs_15415 0 0 1 1 52194942 52194962 mRNA hsa-miR-431 FRMD6 miRanda miRanda
14034 chr14 55005199 55005199 1 + A C rs373237079 55005193 + 55005173 55005213 41 ACATGGAATCTACAGTACTGACCATCAATGAAAATTATATT ACATGGAATCTACAGTACTGACCATCCATGAAAATTATATT < 41bp 1 0.418723003576291 1 0.993224620819092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CGRRF1 ENSG00000100532 UTR3 Human protein_coding chr14:55005193 chr14:55005199 . . 0 hm6A_associated_SNPs_15420 0 0 1 6 55005183 55005205 mRNA hsa-miR-33a CGRRF1 miRanda miRanda
14034 chr14 55005199 55005199 1 + A C rs373237079 55005193 + 55005173 55005213 41 ACATGGAATCTACAGTACTGACCATCAATGAAAATTATATT ACATGGAATCTACAGTACTGACCATCCATGAAAATTATATT < 41bp 1 0.418723003576291 1 0.993224620819092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CGRRF1 ENSG00000100532 UTR3 Human protein_coding chr14:55005193 chr14:55005199 . . 0 hm6A_associated_SNPs_15420 0 0 1 6 55005191 55005212 mRNA hsa-miR-374a CGRRF1 miRanda miRanda
14034 chr14 55005199 55005199 1 + A C rs373237079 55005193 + 55005173 55005213 41 ACATGGAATCTACAGTACTGACCATCAATGAAAATTATATT ACATGGAATCTACAGTACTGACCATCCATGAAAATTATATT < 41bp 1 0.418723003576291 1 0.993224620819092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CGRRF1 ENSG00000100532 UTR3 Human protein_coding chr14:55005193 chr14:55005199 . . 0 hm6A_associated_SNPs_15420 0 0 1 6 55005193 55005213 mRNA hsa-miR-410 CGRRF1 miRanda miRanda
14034 chr14 55005199 55005199 1 + A C rs373237079 55005193 + 55005173 55005213 41 ACATGGAATCTACAGTACTGACCATCAATGAAAATTATATT ACATGGAATCTACAGTACTGACCATCCATGAAAATTATATT < 41bp 1 0.418723003576291 1 0.993224620819092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CGRRF1 ENSG00000100532 UTR3 Human protein_coding chr14:55005193 chr14:55005199 . . 0 hm6A_associated_SNPs_15420 0 0 1 6 55005189 55005209 mRNA hsa-miR-590-3p CGRRF1 miRanda miRanda
14034 chr14 55005199 55005199 1 + A C rs373237079 55005193 + 55005173 55005213 41 ACATGGAATCTACAGTACTGACCATCAATGAAAATTATATT ACATGGAATCTACAGTACTGACCATCCATGAAAATTATATT < 41bp 1 0.418723003576291 1 0.993224620819092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CGRRF1 ENSG00000100532 UTR3 Human protein_coding chr14:55005193 chr14:55005199 . . 0 hm6A_associated_SNPs_15420 0 0 1 6 55005187 55005205 mRNA hsa-miR-33b CGRRF1 miRanda miRanda
14034 chr14 55005199 55005199 1 + A C rs373237079 55005193 + 55005173 55005213 41 ACATGGAATCTACAGTACTGACCATCAATGAAAATTATATT ACATGGAATCTACAGTACTGACCATCCATGAAAATTATATT < 41bp 1 0.418723003576291 1 0.993224620819092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CGRRF1 ENSG00000100532 UTR3 Human protein_coding chr14:55005193 chr14:55005199 . . 0 hm6A_associated_SNPs_15420 0 0 1 6 55005191 55005212 mRNA hsa-miR-374b CGRRF1 miRanda miRanda
14034 chr14 55820187 55820187 1 + G T rs117256830 55820167 + 55820147 55820187 41 CCAAATAATGGTTTAACTGGACAACCTGAAAATTAGCATAG CCAAATAATGGTTTAACTGGACAACCTGAAAATTAGCATAT < 41bp 1 0.680062698056071 1 0.943193078041077 experiment 0.639874603887859 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 FBXO34 ENSG00000178974 UTR3 Human protein_coding chr14:55820167 chr14:55820187 . . 0 hm6A_associated_SNPs_15435 0 0 1 3 55820177 55820197 mRNA hsa-miR-219-5p FBXO34 miRanda miRanda
14034 chr14 55820187 55820187 1 + G T rs117256830 55820167 + 55820147 55820187 41 CCAAATAATGGTTTAACTGGACAACCTGAAAATTAGCATAG CCAAATAATGGTTTAACTGGACAACCTGAAAATTAGCATAT < 41bp 1 0.680062698056071 1 0.943193078041077 experiment 0.639874603887859 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 FBXO34 ENSG00000178974 UTR3 Human protein_coding chr14:55820167 chr14:55820187 . . 0 hm6A_associated_SNPs_15435 0 0 1 3 55820187 55820208 mRNA hsa-miR-410 FBXO34 miRanda miRanda
14034 chr14 55820187 55820187 1 + G T rs117256830 55820167 + 55820147 55820187 41 CCAAATAATGGTTTAACTGGACAACCTGAAAATTAGCATAG CCAAATAATGGTTTAACTGGACAACCTGAAAATTAGCATAT < 41bp 1 0.680062698056071 1 0.943193078041077 experiment 0.639874603887859 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 FBXO34 ENSG00000178974 UTR3 Human protein_coding chr14:55820167 chr14:55820187 . . 0 hm6A_associated_SNPs_15435 0 0 1 3 55820183 55820204 mRNA hsa-miR-495 FBXO34 miRanda miRanda
14034 chr14 56151052 56151052 1 + C A rs544020158 56151034 + 56151014 56151054 41 AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGACCT AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGAACT < 41bp 1 0.335905122865005 1 0.952177882194519 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56151034 chr14:56151052 . . 0 hm6A_associated_SNPs_15441 0 0 1 6 56151043 56151064 mRNA hsa-miR-1 KTN1 miRanda miRanda
14034 chr14 56151052 56151052 1 + C A rs544020158 56151034 + 56151014 56151054 41 AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGACCT AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGAACT < 41bp 1 0.335905122865005 1 0.952177882194519 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56151034 chr14:56151052 . . 0 hm6A_associated_SNPs_15441 0 0 1 6 56151046 56151064 mRNA hsa-miR-122 KTN1 miRanda miRanda
14034 chr14 56151052 56151052 1 + C A rs544020158 56151034 + 56151014 56151054 41 AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGACCT AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGAACT < 41bp 1 0.335905122865005 1 0.952177882194519 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56151034 chr14:56151052 . . 0 hm6A_associated_SNPs_15441 0 0 1 6 56151043 56151064 mRNA hsa-miR-206 KTN1 miRanda miRanda
14034 chr14 56151052 56151052 1 + C A rs544020158 56151034 + 56151014 56151054 41 AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGACCT AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGAACT < 41bp 1 0.335905122865005 1 0.952177882194519 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56151034 chr14:56151052 . . 0 hm6A_associated_SNPs_15441 0 0 1 6 56151038 56151060 mRNA hsa-miR-488 KTN1 miRanda miRanda
14034 chr14 56151052 56151052 1 + C A rs544020158 56151034 + 56151014 56151054 41 AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGACCT AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGAACT < 41bp 1 0.335905122865005 1 0.952177882194519 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56151034 chr14:56151052 . . 0 hm6A_associated_SNPs_15441 0 0 1 6 56151045 56151064 mRNA hsa-miR-613 KTN1 miRanda miRanda
14034 chr14 56151052 56151052 1 + C A rs544020158 56151034 + 56151014 56151054 41 AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGACCT AGTTTAGTTTTATAATAAAAACTGTTTGAATAATTAGAACT < 41bp 1 0.335905122865005 1 0.952177882194519 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56151034 chr14:56151052 . . 0 hm6A_associated_SNPs_15441 0 0 1 6 56151046 56151066 mRNA hsa-miR-873 KTN1 miRanda miRanda
14034 chr14 56151093 56151093 1 + T C rs190589043 56151073 + 56151053 56151093 41 CTTTACATTCCTGAAGATAAACATGTAATCTTTTATCTTAT CTTTACATTCCTGAAGATAAACATGTAATCTTTTATCTTAC < 41bp 1 0.481362976648359 1 0.805117130279541 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56151073 chr14:56151093 . . 0 hm6A_associated_SNPs_15442 0 0 1 1 56151089 56151110 mRNA hsa-miR-590-3p KTN1 miRanda miRanda
14034 chr14 57755760 57755760 1 + T C rs568507752 57755768 + 57755748 57755788 41 GTCTGATAGAGCTTGAAAGGACATTTTAAAAGCTAATGTCT GTCTGATAGAGCCTGAAAGGACATTTTAAAAGCTAATGTCT < 41bp 1 0.793214554273204 1 0.114579886198044 experiment 0.413570891453593 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 13 AP5M1 ENSG00000053770 UTR3 Human protein_coding chr14:57755768 chr14:57755760 . . 0 hm6A_associated_SNPs_15445 0 0 1 1 57755739 57755761 mRNA hsa-miR-21 MUDENG miRanda miRanda
14034 chr14 57878715 57878715 1 + C T rs563020273 57878725 + 57878705 57878745 41 ACTGACTGTACTATCCACTGACACTGGTTTGGCAGTTGGTA ACTGACTGTATTATCCACTGACACTGGTTTGGCAGTTGGTA < 41bp 1 0.520108724716761 1 0.927669286727905 experiment 0.959782550566479 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 NAA30 ENSG00000139977 UTR3 Human protein_coding chr14:57878725 chr14:57878715 . . 0 hm6A_associated_SNPs_15447 0 0 1 2 57878711 57878732 mRNA hsa-miR-199a-5p NAA30 miRanda miRanda
14034 chr14 57878715 57878715 1 + C T rs563020273 57878725 + 57878705 57878745 41 ACTGACTGTACTATCCACTGACACTGGTTTGGCAGTTGGTA ACTGACTGTATTATCCACTGACACTGGTTTGGCAGTTGGTA < 41bp 1 0.520108724716761 1 0.927669286727905 experiment 0.959782550566479 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 NAA30 ENSG00000139977 UTR3 Human protein_coding chr14:57878725 chr14:57878715 . . 0 hm6A_associated_SNPs_15447 0 0 1 2 57878711 57878732 mRNA hsa-miR-199b-5p NAA30 miRanda miRanda
14034 chr14 59970967 59970967 1 + A G rs371261582 59970954 + 59970934 59970974 41 GTTTATGGTTAGACTTACAGACTTGGAAAATGCAAAACTCT GTTTATGGTTAGACTTACAGACTTGGAAAATGCGAAACTCT < 41bp 1 0.415028467332545 1 0.862129211425781 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 JKAMP ENSG00000258782 ncRNA_intronic Human processed_transcript chr14:59970954 chr14:59970967 . . 0 hm6A_associated_SNPs_15455 0 0 1 1 59970963 59970984 mRNA hsa-miR-496 JKAMP miRanda miRanda
14034 chr14 59971208 59971208 1 + T C rs73303700 59971216 + 59971196 59971236 41 ACCTATAATGAATTGTAAAAACAAACATACTTGTGGGGTCT ACCTATAATGAACTGTAAAAACAAACATACTTGTGGGGTCT < 41bp 1 0.393519559924477 1 0.292903870344162 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 13 JKAMP ENSG00000258782 ncRNA_intronic Human processed_transcript chr14:59971216 chr14:59971208 . . 0 hm6A_associated_SNPs_15456 0 0 1 3 59971192 59971212 mRNA hsa-miR-181b JKAMP miRanda miRanda
14034 chr14 59971208 59971208 1 + T C rs73303700 59971216 + 59971196 59971236 41 ACCTATAATGAATTGTAAAAACAAACATACTTGTGGGGTCT ACCTATAATGAACTGTAAAAACAAACATACTTGTGGGGTCT < 41bp 1 0.393519559924477 1 0.292903870344162 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 13 JKAMP ENSG00000258782 ncRNA_intronic Human processed_transcript chr14:59971216 chr14:59971208 . . 0 hm6A_associated_SNPs_15456 0 0 1 3 59971192 59971212 mRNA hsa-miR-181c JKAMP miRanda miRanda
14034 chr14 59971208 59971208 1 + T C rs73303700 59971216 + 59971196 59971236 41 ACCTATAATGAATTGTAAAAACAAACATACTTGTGGGGTCT ACCTATAATGAACTGTAAAAACAAACATACTTGTGGGGTCT < 41bp 1 0.393519559924477 1 0.292903870344162 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 13 JKAMP ENSG00000258782 ncRNA_intronic Human processed_transcript chr14:59971216 chr14:59971208 . . 0 hm6A_associated_SNPs_15456 0 0 1 3 59971189 59971212 mRNA hsa-miR-181d JKAMP miRanda miRanda
14034 chr14 60591164 60591164 1 + G A rs78843394 60591144 + 60591124 60591164 41 CATAATTGATTCTCATGAAAACTTAAAAGAATTTAAAGGTG CATAATTGATTCTCATGAAAACTTAAAAGAATTTAAAGGTA < 41bp 1 0.763395750400495 1 0.908987998962402 experiment 0.473208499199011 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591144 chr14:60591164 nonsynonymous SNV 0.983 3 hm6A_associated_SNPs_15461 0 0 1 1 60591163 60591184 mRNA hsa-miR-101 C14orf135 miRanda miRanda
14034 chr14 60591164 60591164 1 + G A rs78843394 60591165 + 60591145 60591185 41 CTTAAAAGAATTTAAAGGTGACCTCATTAAAGTACTTGTGT CTTAAAAGAATTTAAAGGTAACCTCATTAAAGTACTTGTGT < 41bp 1 0.464599581375771 1 0.888719379901886 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 20 PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591165 chr14:60591164 nonsynonymous SNV 0.983 3 hm6A_associated_SNPs_15462 0 0 1 1 60591163 60591184 mRNA hsa-miR-101 C14orf135 miRanda miRanda
14034 chr14 60600992 60600992 1 + T C rs138412699 60601002 + 60600982 60601022 41 TTTTTCATCCTAAAAAAGTAACTGTGATTCTTGTAACTTGA TTTTTCATCCCAAAAAAGTAACTGTGATTCTTGTAACTTGA < 41bp 1 0.709726258491627 1 0.960089445114136 experiment 0.580547483016745 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601002 chr14:60600992 . . 0 hm6A_associated_SNPs_15463 0 0 1 3 60600989 60601009 mRNA hsa-miR-27a C14orf135 miRanda miRanda
14034 chr14 60600992 60600992 1 + T C rs138412699 60601002 + 60600982 60601022 41 TTTTTCATCCTAAAAAAGTAACTGTGATTCTTGTAACTTGA TTTTTCATCCCAAAAAAGTAACTGTGATTCTTGTAACTTGA < 41bp 1 0.709726258491627 1 0.960089445114136 experiment 0.580547483016745 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601002 chr14:60600992 . . 0 hm6A_associated_SNPs_15463 0 0 1 3 60600989 60601009 mRNA hsa-miR-27b C14orf135 miRanda miRanda
14034 chr14 60600992 60600992 1 + T C rs138412699 60601002 + 60600982 60601022 41 TTTTTCATCCTAAAAAAGTAACTGTGATTCTTGTAACTTGA TTTTTCATCCCAAAAAAGTAACTGTGATTCTTGTAACTTGA < 41bp 1 0.709726258491627 1 0.960089445114136 experiment 0.580547483016745 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601002 chr14:60600992 . . 0 hm6A_associated_SNPs_15463 0 0 1 3 60600988 60601008 mRNA hsa-miR-128 C14orf135 miRanda miRanda
14034 chr14 60601308 60601308 1 + G A rs397598 60601315 + 60601295 60601335 41 TTTACATACTTAAGAGATAAACATATCAGTGTTCTAAGTAG TTTACATACTTAAAAGATAAACATATCAGTGTTCTAAGTAG < 41bp 1 0.19002877474161 1 0.0177074372768402 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601315 chr14:60601308 . . 0 hm6A_associated_SNPs_15464 0 0 1 5 60601306 60601328 mRNA hsa-miR-141 C14orf135 miRanda miRanda
14034 chr14 60601308 60601308 1 + G A rs397598 60601315 + 60601295 60601335 41 TTTACATACTTAAGAGATAAACATATCAGTGTTCTAAGTAG TTTACATACTTAAAAGATAAACATATCAGTGTTCTAAGTAG < 41bp 1 0.19002877474161 1 0.0177074372768402 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601315 chr14:60601308 . . 0 hm6A_associated_SNPs_15464 0 0 1 5 60601302 60601322 mRNA hsa-miR-190 C14orf135 miRanda miRanda
14034 chr14 60601308 60601308 1 + G A rs397598 60601315 + 60601295 60601335 41 TTTACATACTTAAGAGATAAACATATCAGTGTTCTAAGTAG TTTACATACTTAAAAGATAAACATATCAGTGTTCTAAGTAG < 41bp 1 0.19002877474161 1 0.0177074372768402 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601315 chr14:60601308 . . 0 hm6A_associated_SNPs_15464 0 0 1 5 60601306 60601328 mRNA hsa-miR-200a C14orf135 miRanda miRanda
14034 chr14 60601308 60601308 1 + G A rs397598 60601315 + 60601295 60601335 41 TTTACATACTTAAGAGATAAACATATCAGTGTTCTAAGTAG TTTACATACTTAAAAGATAAACATATCAGTGTTCTAAGTAG < 41bp 1 0.19002877474161 1 0.0177074372768402 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601315 chr14:60601308 . . 0 hm6A_associated_SNPs_15464 0 0 1 5 60601301 60601322 mRNA hsa-miR-190b C14orf135 miRanda miRanda
14034 chr14 60601308 60601308 1 + G A rs397598 60601315 + 60601295 60601335 41 TTTACATACTTAAGAGATAAACATATCAGTGTTCTAAGTAG TTTACATACTTAAAAGATAAACATATCAGTGTTCTAAGTAG < 41bp 1 0.19002877474161 1 0.0177074372768402 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 PCNX4 ENSG00000126773 UTR3 Human protein_coding chr14:60601315 chr14:60601308 . . 0 hm6A_associated_SNPs_15464 0 0 1 5 60601290 60601314 mRNA hsa-miR-216b C14orf135 miRanda miRanda
14034 chr14 62017104 62017104 1 + C T rs572361082 62017088 + 62017068 62017108 41 CAAACAATGGTATCTCTGAAACTCACAACCTAAAGCCCAAT CAAACAATGGTATCTCTGAAACTCACAACCTAAAGCTCAAT < 41bp 1 0.122199553988007 1 0.940946817398071 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 37 PRKCH ENSG00000027075 UTR3 Human protein_coding chr14:62017088 chr14:62017104 . . 0 hm6A_associated_SNPs_15469 0 0 1 1 62017104 62017129 mRNA hsa-miR-19a PRKCH miRanda miRanda
14034 chr14 64633984 64633984 1 + G A rs17179194 64633969 + 64633949 64633989 41 AGAATCATGTGCTGGCACTGACAGCCCAATCACCTGATATT AGAATCATGTGCTGGCACTGACAGCCCAATCACCTAATATT < 41bp 1 0.208631575439718 1 0.805323123931885 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 36 SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64633969 chr14:64633984 nonsynonymous SNV 0.915 1 hm6A_associated_SNPs_15483 1 0 1 1 64633961 64633985 mRNA hsa-miR-125a-3p SYNE2 miRanda miRanda
14034 chr14 64936496 64936496 1 + T A rs111840566 64936477 + 64936457 64936497 41 GTGGCATTTCTTACTCAGTAACAAATGAGAGATTTATCATC GTGGCATTTCTTACTCAGTAACAAATGAGAGATTTATCAAC < 41bp 1 0.122522200619565 1 0.749116778373718 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 AKAP5 ENSG00000179841 UTR3 Human protein_coding chr14:64936477 chr14:64936496 . . 0 hm6A_associated_SNPs_15492 0 0 0 1 64936479 64936500 mRNA hsa-miR-143 AKAP5 miRanda miRanda
14034 chr14 64936496 64936496 1 + T A rs111840566 64936504 + 64936484 64936524 41 AGAGATTTATCATCTCTAGAACTTAAAAGGTACAATTCCAG AGAGATTTATCAACTCTAGAACTTAAAAGGTACAATTCCAG < 41bp 1 0.0967947492764196 1 0.912478566169739 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 AKAP5 ENSG00000179841 UTR3 Human protein_coding chr14:64936504 chr14:64936496 . . 0 hm6A_associated_SNPs_15493 0 0 0 1 64936479 64936500 mRNA hsa-miR-143 AKAP5 miRanda miRanda
14034 chr14 65400378 65400378 1 + A G rs145764569 65400361 + 65400341 65400381 41 AAGCATGTAAAGTACTAGAAACAATGAGGTGGCTTCAATTA AAGCATGTAAAGTACTAGAAACAATGAGGTGGCTTCAGTTA < 41bp 1 0.375479220572864 1 3.16500663757324e-05 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 CHURC1 ENSG00000258289 UTR3 Human protein_coding chr14:65400361 chr14:65400378 . . 0 hm6A_associated_SNPs_15497 0 0 1 1 65400368 65400390 mRNA hsa-miR-183 CHURC1 miRanda miRanda
14034 chr14 66028064 66028064 1 + C T rs28637004 66028079 + 66028059 66028099 41 TAGAGCGCATGAAGTACAGGACAATAAAGCTTCCTACACAT TAGAGTGCATGAAGTACAGGACAATAAAGCTTCCTACACAT < 41bp 1 0.66278632127019 1 0.784807562828064 experiment 0.67442735745962 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 FUT8 ENSG00000033170 UTR5 Human protein_coding chr14:66028079 chr14:66028064 . . 0 hm6A_associated_SNPs_15503 0 0 1 1 66028059 66028079 mRNA hsa-miR-486-5p FUT8 miRanda miRanda
14034 chr14 66028065 66028065 1 + G A rs45549535 66028079 + 66028059 66028099 41 TAGAGCGCATGAAGTACAGGACAATAAAGCTTCCTACACAT TAGAGCACATGAAGTACAGGACAATAAAGCTTCCTACACAT < 41bp 1 0.663052061797482 1 0.82836788892746 experiment 0.673895876405035 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 FUT8 ENSG00000033170 UTR5 Human protein_coding chr14:66028079 chr14:66028065 . . 0 hm6A_associated_SNPs_15504 0 0 1 1 66028059 66028079 mRNA hsa-miR-486-5p FUT8 miRanda miRanda
14034 chr14 66209219 66209219 1 + A G rs185585398 66209224 + 66209204 66209244 41 ATGAAGAGGGCTCTGATCTAACAAAATAAGGTTATATGAGT ATGAAGAGGGCTCTGGTCTAACAAAATAAGGTTATATGAGT < 41bp 1 0.622924748230044 1 0.871808767318726 experiment 0.754150503539912 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209224 chr14:66209219 . . 0 hm6A_associated_SNPs_15507 0 0 1 1 66209201 66209222 mRNA hsa-miR-383 FUT8 miRanda miRanda
14034 chr14 66209238 66209238 1 + T C rs569850049 66209224 + 66209204 66209244 41 ATGAAGAGGGCTCTGATCTAACAAAATAAGGTTATATGAGT ATGAAGAGGGCTCTGATCTAACAAAATAAGGTTACATGAGT < 41bp 1 0.64699207055773 1 0.865797519683838 experiment 0.706015858884539 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209224 chr14:66209238 . . 0 hm6A_associated_SNPs_15508 0 0 1 1 66209221 66209241 mRNA hsa-miR-410 FUT8 miRanda miRanda
14034 chr14 66209455 66209455 1 + G A rs57228058 66209450 + 66209430 66209470 41 CATATTGTGTAATTTAAGTGACACAGACATTTTGTGTGAGA CATATTGTGTAATTTAAGTGACACAAACATTTTGTGTGAGA < 41bp 1 0.738896366333791 1 0.292112410068512 experiment 0.522207267332419 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 26 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209450 chr14:66209455 . . 0 hm6A_associated_SNPs_15510 0 0 1 3 66209448 66209469 mRNA hsa-miR-377 FUT8 miRanda miRanda
14034 chr14 66209455 66209455 1 + G A rs57228058 66209450 + 66209430 66209470 41 CATATTGTGTAATTTAAGTGACACAGACATTTTGTGTGAGA CATATTGTGTAATTTAAGTGACACAAACATTTTGTGTGAGA < 41bp 1 0.738896366333791 1 0.292112410068512 experiment 0.522207267332419 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 26 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209450 chr14:66209455 . . 0 hm6A_associated_SNPs_15510 0 0 1 3 66209448 66209470 mRNA hsa-miR-342-3p FUT8 miRanda miRanda
14034 chr14 66209455 66209455 1 + G A rs57228058 66209450 + 66209430 66209470 41 CATATTGTGTAATTTAAGTGACACAGACATTTTGTGTGAGA CATATTGTGTAATTTAAGTGACACAAACATTTTGTGTGAGA < 41bp 1 0.738896366333791 1 0.292112410068512 experiment 0.522207267332419 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 26 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209450 chr14:66209455 . . 0 hm6A_associated_SNPs_15510 0 0 1 3 66209437 66209456 mRNA hsa-miR-599 FUT8 miRanda miRanda
14034 chr14 66209455 66209455 1 + G A rs57228058 66209470 + 66209450 66209490 41 ACACAGACATTTTGTGTGAGACTTAAAACATGGTGCCTATA ACACAAACATTTTGTGTGAGACTTAAAACATGGTGCCTATA < 41bp 1 0.794678534932225 1 0.739831686019897 experiment 0.41064293013555 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209470 chr14:66209455 . . 0 hm6A_associated_SNPs_15511 0 0 1 3 66209448 66209469 mRNA hsa-miR-377 FUT8 miRanda miRanda
14034 chr14 66209455 66209455 1 + G A rs57228058 66209470 + 66209450 66209490 41 ACACAGACATTTTGTGTGAGACTTAAAACATGGTGCCTATA ACACAAACATTTTGTGTGAGACTTAAAACATGGTGCCTATA < 41bp 1 0.794678534932225 1 0.739831686019897 experiment 0.41064293013555 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209470 chr14:66209455 . . 0 hm6A_associated_SNPs_15511 0 0 1 3 66209448 66209470 mRNA hsa-miR-342-3p FUT8 miRanda miRanda
14034 chr14 66209455 66209455 1 + G A rs57228058 66209470 + 66209450 66209490 41 ACACAGACATTTTGTGTGAGACTTAAAACATGGTGCCTATA ACACAAACATTTTGTGTGAGACTTAAAACATGGTGCCTATA < 41bp 1 0.794678534932225 1 0.739831686019897 experiment 0.41064293013555 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209470 chr14:66209455 . . 0 hm6A_associated_SNPs_15511 0 0 1 3 66209437 66209456 mRNA hsa-miR-599 FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209769 66209788 mRNA hsa-miR-33a FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209767 66209788 mRNA hsa-miR-34a FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209765 66209790 mRNA hsa-miR-183 FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209783 66209810 mRNA hsa-miR-146a FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209783 66209803 mRNA hsa-miR-186 FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209767 66209788 mRNA hsa-miR-34c-5p FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209777 66209796 mRNA hsa-miR-375 FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209767 66209788 mRNA hsa-miR-449a FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209770 66209788 mRNA hsa-miR-33b FUT8 miRanda miRanda
14034 chr14 66209783 66209783 1 + A G rs1054240 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAGTGCCATGAACAAATTCTTTAGTACTCAAT < 41bp 1 0.307742194308663 1 0.263965249061584 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209783 . . 0 hm6A_associated_SNPs_15512 0 0 1 10 66209767 66209788 mRNA hsa-miR-449b FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAGT < 41bp 1 0.290636889322669 1 0.1690993309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209811 . . 0 hm6A_associated_SNPs_15513 0 0 1 7 66209807 66209828 mRNA hsa-miR-1 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAGT < 41bp 1 0.290636889322669 1 0.1690993309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209811 . . 0 hm6A_associated_SNPs_15513 0 0 1 7 66209807 66209828 mRNA hsa-miR-206 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAGT < 41bp 1 0.290636889322669 1 0.1690993309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209811 . . 0 hm6A_associated_SNPs_15513 0 0 1 7 66209811 66209836 mRNA hsa-miR-361-5p FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAGT < 41bp 1 0.290636889322669 1 0.1690993309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209811 . . 0 hm6A_associated_SNPs_15513 0 0 1 7 66209805 66209826 mRNA hsa-miR-365 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAGT < 41bp 1 0.290636889322669 1 0.1690993309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209811 . . 0 hm6A_associated_SNPs_15513 0 0 1 7 66209797 66209818 mRNA hsa-miR-494 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAGT < 41bp 1 0.290636889322669 1 0.1690993309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209811 . . 0 hm6A_associated_SNPs_15513 0 0 1 7 66209809 66209828 mRNA hsa-miR-613 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209792 + 66209772 66209812 41 TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAAT TTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAGT < 41bp 1 0.290636889322669 1 0.1690993309021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209792 chr14:66209811 . . 0 hm6A_associated_SNPs_15513 0 0 1 7 66209795 66209816 mRNA hsa-miR-543 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209821 + 66209801 66209841 41 TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAA TTAGTACTCAGTGTTTCTGGACATTCTCTTTGATAACAAAA < 41bp 1 0.279711175616268 1 0.160249620676041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209821 chr14:66209811 . . 0 hm6A_associated_SNPs_15514 0 0 1 7 66209807 66209828 mRNA hsa-miR-1 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209821 + 66209801 66209841 41 TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAA TTAGTACTCAGTGTTTCTGGACATTCTCTTTGATAACAAAA < 41bp 1 0.279711175616268 1 0.160249620676041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209821 chr14:66209811 . . 0 hm6A_associated_SNPs_15514 0 0 1 7 66209807 66209828 mRNA hsa-miR-206 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209821 + 66209801 66209841 41 TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAA TTAGTACTCAGTGTTTCTGGACATTCTCTTTGATAACAAAA < 41bp 1 0.279711175616268 1 0.160249620676041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209821 chr14:66209811 . . 0 hm6A_associated_SNPs_15514 0 0 1 7 66209811 66209836 mRNA hsa-miR-361-5p FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209821 + 66209801 66209841 41 TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAA TTAGTACTCAGTGTTTCTGGACATTCTCTTTGATAACAAAA < 41bp 1 0.279711175616268 1 0.160249620676041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209821 chr14:66209811 . . 0 hm6A_associated_SNPs_15514 0 0 1 7 66209805 66209826 mRNA hsa-miR-365 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209821 + 66209801 66209841 41 TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAA TTAGTACTCAGTGTTTCTGGACATTCTCTTTGATAACAAAA < 41bp 1 0.279711175616268 1 0.160249620676041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209821 chr14:66209811 . . 0 hm6A_associated_SNPs_15514 0 0 1 7 66209797 66209818 mRNA hsa-miR-494 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209821 + 66209801 66209841 41 TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAA TTAGTACTCAGTGTTTCTGGACATTCTCTTTGATAACAAAA < 41bp 1 0.279711175616268 1 0.160249620676041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209821 chr14:66209811 . . 0 hm6A_associated_SNPs_15514 0 0 1 7 66209809 66209828 mRNA hsa-miR-613 FUT8 miRanda miRanda
14034 chr14 66209811 66209811 1 + A G rs192175288 66209821 + 66209801 66209841 41 TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAA TTAGTACTCAGTGTTTCTGGACATTCTCTTTGATAACAAAA < 41bp 1 0.279711175616268 1 0.160249620676041 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 FUT8 ENSG00000033170 UTR3 Human protein_coding chr14:66209821 chr14:66209811 . . 0 hm6A_associated_SNPs_15514 0 0 1 7 66209795 66209816 mRNA hsa-miR-543 FUT8 miRanda miRanda
14034 chr14 67648379 67648379 1 + G T rs140678260 67648370 + 67648350 67648390 41 ACAAAAAAATAAAATCAAAGACTGATCTTGTACAGATATTA ACAAAAAAATAAAATCAAAGACTGATCTTTTACAGATATTA < 41bp 1 0.173212215420724 1 0.950202345848083 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 GPHN ENSG00000171723 UTR3 Human protein_coding chr14:67648370 chr14:67648379 . . 0 hm6A_associated_SNPs_15515 0 0 1 7 67648372 67648396 mRNA hsa-miR-141 GPHN miRanda miRanda
14034 chr14 67648379 67648379 1 + G T rs140678260 67648370 + 67648350 67648390 41 ACAAAAAAATAAAATCAAAGACTGATCTTGTACAGATATTA ACAAAAAAATAAAATCAAAGACTGATCTTTTACAGATATTA < 41bp 1 0.173212215420724 1 0.950202345848083 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 GPHN ENSG00000171723 UTR3 Human protein_coding chr14:67648370 chr14:67648379 . . 0 hm6A_associated_SNPs_15515 0 0 1 7 67648377 67648398 mRNA hsa-miR-194 GPHN miRanda miRanda
14034 chr14 67648379 67648379 1 + G T rs140678260 67648370 + 67648350 67648390 41 ACAAAAAAATAAAATCAAAGACTGATCTTGTACAGATATTA ACAAAAAAATAAAATCAAAGACTGATCTTTTACAGATATTA < 41bp 1 0.173212215420724 1 0.950202345848083 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 GPHN ENSG00000171723 UTR3 Human protein_coding chr14:67648370 chr14:67648379 . . 0 hm6A_associated_SNPs_15515 0 0 1 7 67648372 67648396 mRNA hsa-miR-200a GPHN miRanda miRanda
14034 chr14 67648379 67648379 1 + G T rs140678260 67648370 + 67648350 67648390 41 ACAAAAAAATAAAATCAAAGACTGATCTTGTACAGATATTA ACAAAAAAATAAAATCAAAGACTGATCTTTTACAGATATTA < 41bp 1 0.173212215420724 1 0.950202345848083 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 GPHN ENSG00000171723 UTR3 Human protein_coding chr14:67648370 chr14:67648379 . . 0 hm6A_associated_SNPs_15515 0 0 1 7 67648362 67648383 mRNA hsa-miR-381 GPHN miRanda miRanda
14034 chr14 67648379 67648379 1 + G T rs140678260 67648370 + 67648350 67648390 41 ACAAAAAAATAAAATCAAAGACTGATCTTGTACAGATATTA ACAAAAAAATAAAATCAAAGACTGATCTTTTACAGATATTA < 41bp 1 0.173212215420724 1 0.950202345848083 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 GPHN ENSG00000171723 UTR3 Human protein_coding chr14:67648370 chr14:67648379 . . 0 hm6A_associated_SNPs_15515 0 0 1 7 67648364 67648386 mRNA hsa-miR-486-5p GPHN miRanda miRanda
14034 chr14 67648379 67648379 1 + G T rs140678260 67648370 + 67648350 67648390 41 ACAAAAAAATAAAATCAAAGACTGATCTTGTACAGATATTA ACAAAAAAATAAAATCAAAGACTGATCTTTTACAGATATTA < 41bp 1 0.173212215420724 1 0.950202345848083 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 GPHN ENSG00000171723 UTR3 Human protein_coding chr14:67648370 chr14:67648379 . . 0 hm6A_associated_SNPs_15515 0 0 1 7 67648364 67648387 mRNA hsa-miR-487b GPHN miRanda miRanda
14034 chr14 67648379 67648379 1 + G T rs140678260 67648370 + 67648350 67648390 41 ACAAAAAAATAAAATCAAAGACTGATCTTGTACAGATATTA ACAAAAAAATAAAATCAAAGACTGATCTTTTACAGATATTA < 41bp 1 0.173212215420724 1 0.950202345848083 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 GPHN ENSG00000171723 UTR3 Human protein_coding chr14:67648370 chr14:67648379 . . 0 hm6A_associated_SNPs_15515 0 0 1 7 67648362 67648383 mRNA hsa-miR-300 GPHN miRanda miRanda
14034 chr14 67800316 67800316 1 + G A rs960797 67800331 + 67800311 67800351 41 GCTCAGACTTTGTGGATCAGACTCTACACTCAACACACTCT GCTCAAACTTTGTGGATCAGACTCTACACTCAACACACTCT < 41bp 1 0.280216412426379 1 0.0903525054454803 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 MPP5 ENSG00000072415 UTR3 Human protein_coding chr14:67800331 chr14:67800316 . . 0 hm6A_associated_SNPs_15517 0 0 1 4 67800300 67800322 mRNA hsa-miR-320a MPP5 miRanda miRanda
14034 chr14 67800316 67800316 1 + G A rs960797 67800331 + 67800311 67800351 41 GCTCAGACTTTGTGGATCAGACTCTACACTCAACACACTCT GCTCAAACTTTGTGGATCAGACTCTACACTCAACACACTCT < 41bp 1 0.280216412426379 1 0.0903525054454803 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 MPP5 ENSG00000072415 UTR3 Human protein_coding chr14:67800331 chr14:67800316 . . 0 hm6A_associated_SNPs_15517 0 0 1 4 67800300 67800322 mRNA hsa-miR-320b MPP5 miRanda miRanda
14034 chr14 67800316 67800316 1 + G A rs960797 67800331 + 67800311 67800351 41 GCTCAGACTTTGTGGATCAGACTCTACACTCAACACACTCT GCTCAAACTTTGTGGATCAGACTCTACACTCAACACACTCT < 41bp 1 0.280216412426379 1 0.0903525054454803 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 MPP5 ENSG00000072415 UTR3 Human protein_coding chr14:67800331 chr14:67800316 . . 0 hm6A_associated_SNPs_15517 0 0 1 4 67800302 67800322 mRNA hsa-miR-320c MPP5 miRanda miRanda
14034 chr14 67800316 67800316 1 + G A rs960797 67800331 + 67800311 67800351 41 GCTCAGACTTTGTGGATCAGACTCTACACTCAACACACTCT GCTCAAACTTTGTGGATCAGACTCTACACTCAACACACTCT < 41bp 1 0.280216412426379 1 0.0903525054454803 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 MPP5 ENSG00000072415 UTR3 Human protein_coding chr14:67800331 chr14:67800316 . . 0 hm6A_associated_SNPs_15517 0 0 1 4 67800303 67800322 mRNA hsa-miR-320d MPP5 miRanda miRanda
14034 chr14 67850225 67850225 1 + T G rs148521707 67850222 + 67850202 67850242 41 TTCCTGGCTGTAAATCCTAGACTTGAAAGTTTTCCAGTATT TTCCTGGCTGTAAATCCTAGACTGGAAAGTTTTCCAGTATT < 41bp 1 0.672391314115257 1 0.878130078315735 experiment 0.655217371769485 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 EIF2S1 ENSG00000134001 UTR3 Human protein_coding chr14:67850222 chr14:67850225 . . 0 hm6A_associated_SNPs_15520 0 0 1 3 67850222 67850243 mRNA hsa-miR-200b EIF2S1 miRanda miRanda
14034 chr14 67850225 67850225 1 + T G rs148521707 67850222 + 67850202 67850242 41 TTCCTGGCTGTAAATCCTAGACTTGAAAGTTTTCCAGTATT TTCCTGGCTGTAAATCCTAGACTGGAAAGTTTTCCAGTATT < 41bp 1 0.672391314115257 1 0.878130078315735 experiment 0.655217371769485 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 EIF2S1 ENSG00000134001 UTR3 Human protein_coding chr14:67850222 chr14:67850225 . . 0 hm6A_associated_SNPs_15520 0 0 1 3 67850221 67850243 mRNA hsa-miR-200c EIF2S1 miRanda miRanda
14034 chr14 67850225 67850225 1 + T G rs148521707 67850222 + 67850202 67850242 41 TTCCTGGCTGTAAATCCTAGACTTGAAAGTTTTCCAGTATT TTCCTGGCTGTAAATCCTAGACTGGAAAGTTTTCCAGTATT < 41bp 1 0.672391314115257 1 0.878130078315735 experiment 0.655217371769485 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 EIF2S1 ENSG00000134001 UTR3 Human protein_coding chr14:67850222 chr14:67850225 . . 0 hm6A_associated_SNPs_15520 0 0 1 3 67850222 67850243 mRNA hsa-miR-429 EIF2S1 miRanda miRanda
14034 chr14 68056092 68056092 1 - T A rs10162 68056087 - 68056067 68056107 41 AAAGGCCAGACAGAAATTGGACTTTGGTTTTCAGACATGGG AAAGGCCAGACAGAATTTGGACTTTGGTTTTCAGACATGGG < 41bp 1 0.389656854560996 1 0.976877808570862 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 PIGH;PLEKHH1 ENSG00000054690;ENSG00000100564 UTR3 Human other chr14:68056087 chr14:68056092 . . 0 hm6A_associated_SNPs_15526 0 0 1 1 68056070 68056093 mRNA hsa-miR-653 PIGH miRanda miRanda
14034 chr14 68056092 68056092 1 - T A rs10162 68056098 - 68056078 68056118 41 AGGATGAGACAAAAGGCCAGACAGAAATTGGACTTTGGTTT AGGATGAGACAAAAGGCCAGACAGAATTTGGACTTTGGTTT < 41bp 1 0.432589918329192 1 0.758427023887634 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 27 PIGH;PLEKHH1 ENSG00000054690;ENSG00000100564 UTR3 Human other chr14:68056098 chr14:68056092 . . 0 hm6A_associated_SNPs_15527 0 0 1 1 68056070 68056093 mRNA hsa-miR-653 PIGH miRanda miRanda
14034 chr14 68056092 68056092 1 - T A rs10162 68056110 - 68056090 68056130 41 CTTTTGCCAAGAAGGATGAGACAAAAGGCCAGACAGAAATT CTTTTGCCAAGAAGGATGAGACAAAAGGCCAGACAGAATTT < 41bp 1 0.572281713196276 1 0.863189339637756 experiment 0.855436573607448 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 39 PIGH;PLEKHH1 ENSG00000054690;ENSG00000100564 UTR3 Human other chr14:68056110 chr14:68056092 . . 0 hm6A_associated_SNPs_15528 0 0 1 1 68056070 68056093 mRNA hsa-miR-653 PIGH miRanda miRanda
14034 chr14 69707921 69707921 1 + C T rs138879736 69707938 + 69707918 69707958 41 TGACACAACTCAGAATACTAACCTAGACTAATCCCAGGATG TGATACAACTCAGAATACTAACCTAGACTAATCCCAGGATG < 41bp 1 0.576089876902819 1 0.975953459739685 experiment 0.847820246194361 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 EXD2 ENSG00000258520 ncRNA_intronic Human lincRNA chr14:69707938 chr14:69707921 . . 0 hm6A_associated_SNPs_15533 0 0 1 4 69707918 69707942 mRNA hsa-miR-196a EXD2 miRanda miRanda
14034 chr14 69707921 69707921 1 + C T rs138879736 69707938 + 69707918 69707958 41 TGACACAACTCAGAATACTAACCTAGACTAATCCCAGGATG TGATACAACTCAGAATACTAACCTAGACTAATCCCAGGATG < 41bp 1 0.576089876902819 1 0.975953459739685 experiment 0.847820246194361 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 EXD2 ENSG00000258520 ncRNA_intronic Human lincRNA chr14:69707938 chr14:69707921 . . 0 hm6A_associated_SNPs_15533 0 0 1 4 69707902 69707921 mRNA hsa-miR-377 EXD2 miRanda miRanda
14034 chr14 69707921 69707921 1 + C T rs138879736 69707938 + 69707918 69707958 41 TGACACAACTCAGAATACTAACCTAGACTAATCCCAGGATG TGATACAACTCAGAATACTAACCTAGACTAATCCCAGGATG < 41bp 1 0.576089876902819 1 0.975953459739685 experiment 0.847820246194361 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 EXD2 ENSG00000258520 ncRNA_intronic Human lincRNA chr14:69707938 chr14:69707921 . . 0 hm6A_associated_SNPs_15533 0 0 1 4 69707921 69707942 mRNA hsa-miR-196b EXD2 miRanda miRanda
14034 chr14 69707921 69707921 1 + C T rs138879736 69707938 + 69707918 69707958 41 TGACACAACTCAGAATACTAACCTAGACTAATCCCAGGATG TGATACAACTCAGAATACTAACCTAGACTAATCCCAGGATG < 41bp 1 0.576089876902819 1 0.975953459739685 experiment 0.847820246194361 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 EXD2 ENSG00000258520 ncRNA_intronic Human lincRNA chr14:69707938 chr14:69707921 . . 0 hm6A_associated_SNPs_15533 0 0 1 4 69707907 69707926 mRNA hsa-miR-599 EXD2 miRanda miRanda
14034 chr14 69820250 69820250 1 + T C rs139552878 69820245 + 69820225 69820265 41 CACTGGCTCTTGGGCAAATGACTGTTGGTACCAGGACCCTG CACTGGCTCTTGGGCAAATGACTGTCGGTACCAGGACCCTG < 41bp 1 0.162252413888091 1 0.817959666252136 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 GALNT16 ENSG00000100626 UTR3 Human protein_coding chr14:69820245 chr14:69820250 . . 0 hm6A_associated_SNPs_15535 0 0 1 2 69820231 69820251 mRNA hsa-miR-212 GALNTL1 miRanda miRanda
14034 chr14 69820250 69820250 1 + T C rs139552878 69820245 + 69820225 69820265 41 CACTGGCTCTTGGGCAAATGACTGTTGGTACCAGGACCCTG CACTGGCTCTTGGGCAAATGACTGTCGGTACCAGGACCCTG < 41bp 1 0.162252413888091 1 0.817959666252136 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 GALNT16 ENSG00000100626 UTR3 Human protein_coding chr14:69820245 chr14:69820250 . . 0 hm6A_associated_SNPs_15535 0 0 1 2 69820230 69820251 mRNA hsa-miR-132 GALNTL1 miRanda miRanda
14034 chr14 69821156 69821156 1 + C A rs117286127 69821149 + 69821129 69821169 41 GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACC GAGGACCTCGTCTTTATGAAACACACAACTGGAATAAAACC < 41bp 1 0.0724724107273955 1 0.963025093078613 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 GALNT16 ENSG00000100626 UTR3 Human protein_coding chr14:69821149 chr14:69821156 . . 0 hm6A_associated_SNPs_15538 0 0 0 1 69821153 69821173 mRNA hsa-miR-140-5p GALNTL1 miRanda miRanda
14034 chr14 69928545 69928545 1 + C T rs148648575 69928562 + 69928542 69928582 41 GCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT GCCTCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT < 41bp 1 0.196560235692559 1 0.963709771633148 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 SLC39A9 ENSG00000029364 UTR3 Human protein_coding chr14:69928562 chr14:69928545 . . 0 hm6A_associated_SNPs_15542 0 0 1 1 69928541 69928562 mRNA hsa-miR-150 SLC39A9 miRanda miRanda
14034 chr14 69928943 69928943 1 + A G rs7276 69928923 + 69928903 69928943 41 TAGAAGTCTCATGGGATAAGACTGCAGTTCCCCTGGTTCAA TAGAAGTCTCATGGGATAAGACTGCAGTTCCCCTGGTTCAG < 41bp 1 0.142006793424937 1 0.0449389815330505 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 SLC39A9 ENSG00000029364 UTR3 Human protein_coding chr14:69928923 chr14:69928943 . . 0 hm6A_associated_SNPs_15543 0 0 1 2 69928937 69928961 mRNA hsa-miR-200b SLC39A9 miRanda miRanda
14034 chr14 69928943 69928943 1 + A G rs7276 69928923 + 69928903 69928943 41 TAGAAGTCTCATGGGATAAGACTGCAGTTCCCCTGGTTCAA TAGAAGTCTCATGGGATAAGACTGCAGTTCCCCTGGTTCAG < 41bp 1 0.142006793424937 1 0.0449389815330505 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 SLC39A9 ENSG00000029364 UTR3 Human protein_coding chr14:69928923 chr14:69928943 . . 0 hm6A_associated_SNPs_15543 0 0 1 2 69928936 69928961 mRNA hsa-miR-200c SLC39A9 miRanda miRanda
14034 chr14 70497188 70497188 1 + G A rs189175828 70497198 + 70497178 70497218 41 GAAAAGGAAAGGGAAGAAAGACTTTATTCTCTCTCTTATTG GAAAAGGAAAAGGAAGAAAGACTTTATTCTCTCTCTTATTG < 41bp 1 0.470109689336786 1 0.837445735931396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 11 SMOC1 ENSG00000198732 UTR3 Human protein_coding chr14:70497198 chr14:70497188 . . 0 hm6A_associated_SNPs_15552 0 0 1 2 70497170 70497192 mRNA hsa-miR-204 SMOC1 miRanda miRanda
14034 chr14 70497188 70497188 1 + G A rs189175828 70497198 + 70497178 70497218 41 GAAAAGGAAAGGGAAGAAAGACTTTATTCTCTCTCTTATTG GAAAAGGAAAAGGAAGAAAGACTTTATTCTCTCTCTTATTG < 41bp 1 0.470109689336786 1 0.837445735931396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 11 SMOC1 ENSG00000198732 UTR3 Human protein_coding chr14:70497198 chr14:70497188 . . 0 hm6A_associated_SNPs_15552 0 0 1 2 70497172 70497192 mRNA hsa-miR-211 SMOC1 miRanda miRanda
14034 chr14 71138741 71138741 1 + G C rs1050651 71138729 + 71138709 71138749 41 CTGATTCAGTGTAAATAAAAACAAATTAACAGGTAGTAGTT CTGATTCAGTGTAAATAAAAACAAATTAACAGCTAGTAGTT < 41bp 1 0.693936964617719 1 0.0905138254165649 experiment 0.612126070764562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TTC9 ENSG00000133985 UTR3 Human protein_coding chr14:71138729 chr14:71138741 . . 0 hm6A_associated_SNPs_15557 0 0 0 1 71138734 71138754 mRNA hsa-miR-873 TTC9 miRanda miRanda
14034 chr14 73426071 73426071 1 + G A rs117651766 73426053 + 73426033 73426073 41 CTTAAACTTGGCCTTCTCAAACTCAGCAGCAGATCTCCGGG CTTAAACTTGGCCTTCTCAAACTCAGCAGCAGATCTCCAGG < 41bp 1 0.293599791702662 1 0.876361131668091 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 39 DCAF4 ENSG00000119599 UTR3 Human protein_coding chr14:73426053 chr14:73426071 . . 0 hm6A_associated_SNPs_15575 0 0 1 1 73426068 73426090 mRNA hsa-miR-410 DCAF4 miRanda miRanda
14034 chr14 73586532 73586532 1 + T C rs10141216 73586515 + 73586495 73586535 41 AATTGGTCTTGTGAAGTAAAACTTTTTATATTTAGAGTTCC AATTGGTCTTGTGAAGTAAAACTTTTTATATTTAGAGCTCC < 41bp 1 0.67076361713622 1 0.857324242591858 experiment 0.65847276572756 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 RBM25 ENSG00000119707 UTR3 Human protein_coding chr14:73586515 chr14:73586532 . . 0 hm6A_associated_SNPs_15576 0 0 1 1 73586521 73586542 mRNA hsa-miR-203 RBM25 miRanda miRanda
14034 chr14 73587416 73587416 1 + T C rs362443 73587426 + 73587406 73587446 41 CTATTGTATCTGTTTATTTAACAAAAAATTCATCATACCAA CTATTGTATCCGTTTATTTAACAAAAAATTCATCATACCAA < 41bp 1 0.211737027288385 1 0.0598961114883423 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 RBM25 ENSG00000119707 UTR3 Human protein_coding chr14:73587426 chr14:73587416 . . 0 hm6A_associated_SNPs_15577 0 0 1 1 73587413 73587433 mRNA hsa-miR-129-5p RBM25 miRanda miRanda
14034 chr14 73741087 73741087 1 + G A rs190076580 73741100 + 73741080 73741120 41 GAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC GAAAGACAGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC < 41bp 1 0.531618256546174 1 0.879127144813538 experiment 0.936763486907651 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 PAPLN ENSG00000100767 UTR3 Human protein_coding chr14:73741100 chr14:73741087 . . 0 hm6A_associated_SNPs_15584 0 0 1 4 73741084 73741105 mRNA hsa-miR-133a PAPLN miRanda miRanda
14034 chr14 73741087 73741087 1 + G A rs190076580 73741100 + 73741080 73741120 41 GAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC GAAAGACAGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC < 41bp 1 0.531618256546174 1 0.879127144813538 experiment 0.936763486907651 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 PAPLN ENSG00000100767 UTR3 Human protein_coding chr14:73741100 chr14:73741087 . . 0 hm6A_associated_SNPs_15584 0 0 1 4 73741073 73741094 mRNA hsa-miR-365 PAPLN miRanda miRanda
14034 chr14 73741087 73741087 1 + G A rs190076580 73741100 + 73741080 73741120 41 GAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC GAAAGACAGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC < 41bp 1 0.531618256546174 1 0.879127144813538 experiment 0.936763486907651 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 PAPLN ENSG00000100767 UTR3 Human protein_coding chr14:73741100 chr14:73741087 . . 0 hm6A_associated_SNPs_15584 0 0 1 4 73741081 73741104 mRNA hsa-miR-328 PAPLN miRanda miRanda
14034 chr14 73741087 73741087 1 + G A rs190076580 73741100 + 73741080 73741120 41 GAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC GAAAGACAGGCATTACAGGGACCAAAGCTCTGAAAGGTGAC < 41bp 1 0.531618256546174 1 0.879127144813538 experiment 0.936763486907651 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 PAPLN ENSG00000100767 UTR3 Human protein_coding chr14:73741100 chr14:73741087 . . 0 hm6A_associated_SNPs_15584 0 0 1 4 73741084 73741105 mRNA hsa-miR-133b PAPLN miRanda miRanda
14034 chr14 75202243 75202243 1 + A G rs115677127 75202227 + 75202207 75202247 41 CATGAATTATTATTCTGTTGACCTATTTGCCTTACTATGAG CATGAATTATTATTCTGTTGACCTATTTGCCTTACTGTGAG < 41bp 1 0.0963577730388452 1 0.000101685523986816 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202227 chr14:75202243 . . 0 hm6A_associated_SNPs_15597 0 0 1 4 75202226 75202246 mRNA hsa-miR-26a FCF1 miRanda miRanda
14034 chr14 75202243 75202243 1 + A G rs115677127 75202227 + 75202207 75202247 41 CATGAATTATTATTCTGTTGACCTATTTGCCTTACTATGAG CATGAATTATTATTCTGTTGACCTATTTGCCTTACTGTGAG < 41bp 1 0.0963577730388452 1 0.000101685523986816 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202227 chr14:75202243 . . 0 hm6A_associated_SNPs_15597 0 0 1 4 75202226 75202247 mRNA hsa-miR-26a FCF1 miRanda miRanda
14034 chr14 75202243 75202243 1 + A G rs115677127 75202227 + 75202207 75202247 41 CATGAATTATTATTCTGTTGACCTATTTGCCTTACTATGAG CATGAATTATTATTCTGTTGACCTATTTGCCTTACTGTGAG < 41bp 1 0.0963577730388452 1 0.000101685523986816 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202227 chr14:75202243 . . 0 hm6A_associated_SNPs_15597 0 0 1 4 75202227 75202246 mRNA hsa-miR-26b FCF1 miRanda miRanda
14034 chr14 75202243 75202243 1 + A G rs115677127 75202227 + 75202207 75202247 41 CATGAATTATTATTCTGTTGACCTATTTGCCTTACTATGAG CATGAATTATTATTCTGTTGACCTATTTGCCTTACTGTGAG < 41bp 1 0.0963577730388452 1 0.000101685523986816 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202227 chr14:75202243 . . 0 hm6A_associated_SNPs_15597 0 0 1 4 75202227 75202247 mRNA hsa-miR-26b FCF1 miRanda miRanda
14034 chr14 75544500 75544500 1 + C G rs554670733 75544515 + 75544495 75544535 41 TTGAGCAGACAACAATGGAAACTTTTGGATAGTTCAGAAAG TTGAGGAGACAACAATGGAAACTTTTGGATAGTTCAGAAAG < 41bp 1 0.47140056253187 1 0.802159070968628 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 ZC2HC1C ENSG00000119703 UTR3 Human protein_coding chr14:75544515 chr14:75544500 . . 0 hm6A_associated_SNPs_15602 0 0 0 2 75544483 75544505 mRNA hsa-miR-346 FAM164C miRanda miRanda
14034 chr14 75544500 75544500 1 + C G rs554670733 75544515 + 75544495 75544535 41 TTGAGCAGACAACAATGGAAACTTTTGGATAGTTCAGAAAG TTGAGGAGACAACAATGGAAACTTTTGGATAGTTCAGAAAG < 41bp 1 0.47140056253187 1 0.802159070968628 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 ZC2HC1C ENSG00000119703 UTR3 Human protein_coding chr14:75544515 chr14:75544500 . . 0 hm6A_associated_SNPs_15602 0 0 0 2 75544490 75544510 mRNA hsa-miR-599 FAM164C miRanda miRanda
14034 chr14 75748215 75748215 1 + G A rs186966778 75748229 + 75748209 75748249 41 TCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTG TCCCTAAAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTG < 41bp 1 0.655227737360632 1 0.932858943939209 experiment 0.689544525278737 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 FOS ENSG00000170345 UTR3 Human protein_coding chr14:75748229 chr14:75748215 . . 0 hm6A_associated_SNPs_15603 0 0 1 1 75748206 75748226 mRNA hsa-miR-873 FOS miRanda miRanda
14034 chr14 75748541 75748541 1 + A G rs546553450 75748536 + 75748516 75748556 41 ATCTAGTGCAGCTGATTTTAACAATAACTACTGTGTTCCTG ATCTAGTGCAGCTGATTTTAACAATGACTACTGTGTTCCTG < 41bp 1 0.507949042267174 1 0.325674057006836 experiment 0.984101915465652 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 FOS ENSG00000170345 UTR3 Human protein_coding chr14:75748536 chr14:75748541 . . 0 hm6A_associated_SNPs_15605 0 0 0 3 75748530 75748550 mRNA hsa-miR-101 FOS miRanda miRanda
14034 chr14 75748541 75748541 1 + A G rs546553450 75748536 + 75748516 75748556 41 ATCTAGTGCAGCTGATTTTAACAATAACTACTGTGTTCCTG ATCTAGTGCAGCTGATTTTAACAATGACTACTGTGTTCCTG < 41bp 1 0.507949042267174 1 0.325674057006836 experiment 0.984101915465652 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 FOS ENSG00000170345 UTR3 Human protein_coding chr14:75748536 chr14:75748541 . . 0 hm6A_associated_SNPs_15605 0 0 0 3 75748531 75748550 mRNA hsa-miR-144 FOS miRanda miRanda
14034 chr14 75748541 75748541 1 + A G rs546553450 75748536 + 75748516 75748556 41 ATCTAGTGCAGCTGATTTTAACAATAACTACTGTGTTCCTG ATCTAGTGCAGCTGATTTTAACAATGACTACTGTGTTCCTG < 41bp 1 0.507949042267174 1 0.325674057006836 experiment 0.984101915465652 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 FOS ENSG00000170345 UTR3 Human protein_coding chr14:75748536 chr14:75748541 . . 0 hm6A_associated_SNPs_15605 0 0 0 3 75748537 75748557 mRNA hsa-miR-873 FOS miRanda miRanda
14034 chr14 76420946 76420946 1 + A G rs371445045 76420961 + 76420941 76420981 41 TTGCCAATCAGCCAATGCAGACTTTCACTGGGACAACAAGA TTGCCGATCAGCCAATGCAGACTTTCACTGGGACAACAAGA < 41bp 1 0.690235039190847 1 0.945867538452148 experiment 0.619529921618305 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 TTLL5 ENSG00000119685 UTR3 Human protein_coding chr14:76420961 chr14:76420946 . . 0 hm6A_associated_SNPs_15608 0 0 0 3 76420943 76420960 mRNA hsa-miR-33a TTLL5 miRanda miRanda
14034 chr14 76420946 76420946 1 + A G rs371445045 76420961 + 76420941 76420981 41 TTGCCAATCAGCCAATGCAGACTTTCACTGGGACAACAAGA TTGCCGATCAGCCAATGCAGACTTTCACTGGGACAACAAGA < 41bp 1 0.690235039190847 1 0.945867538452148 experiment 0.619529921618305 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 TTLL5 ENSG00000119685 UTR3 Human protein_coding chr14:76420961 chr14:76420946 . . 0 hm6A_associated_SNPs_15608 0 0 0 3 76420926 76420948 mRNA hsa-miR-182 TTLL5 miRanda miRanda
14034 chr14 76420946 76420946 1 + A G rs371445045 76420961 + 76420941 76420981 41 TTGCCAATCAGCCAATGCAGACTTTCACTGGGACAACAAGA TTGCCGATCAGCCAATGCAGACTTTCACTGGGACAACAAGA < 41bp 1 0.690235039190847 1 0.945867538452148 experiment 0.619529921618305 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 TTLL5 ENSG00000119685 UTR3 Human protein_coding chr14:76420961 chr14:76420946 . . 0 hm6A_associated_SNPs_15608 0 0 0 3 76420938 76420960 mRNA hsa-miR-33b TTLL5 miRanda miRanda
14034 chr14 77248479 77248479 1 + G A rs17104869 77248471 + 77248451 77248491 41 TGCTCAGTGCCAGGGGCAGAACACTGGGGAGCCAGGTATAG TGCTCAGTGCCAGGGGCAGAACACTGGGAAGCCAGGTATAG < 41bp 1 0.368767923865722 1 0.01156947016716 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 VASH1-AS1 ENSG00000258301;ENSG00000258610 ncRNA_exonic Human other chr14:77248471 chr14:77248479 . . 0 hm6A_associated_SNPs_15616 0 0 1 3 77248463 77248486 lncRNA hsa-miR-149-5p AF111169.1 miRanda starBase2
14034 chr14 77248479 77248479 1 + G A rs17104869 77248471 + 77248451 77248491 41 TGCTCAGTGCCAGGGGCAGAACACTGGGGAGCCAGGTATAG TGCTCAGTGCCAGGGGCAGAACACTGGGAAGCCAGGTATAG < 41bp 1 0.368767923865722 1 0.01156947016716 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 VASH1-AS1 ENSG00000258301;ENSG00000258610 ncRNA_exonic Human other chr14:77248471 chr14:77248479 . . 0 hm6A_associated_SNPs_15616 0 0 1 3 77248461 77248481 lncRNA hsa-miR-2355-5p AF111169.1 miRanda starBase2
14034 chr14 77248479 77248479 1 + G A rs17104869 77248471 + 77248451 77248491 41 TGCTCAGTGCCAGGGGCAGAACACTGGGGAGCCAGGTATAG TGCTCAGTGCCAGGGGCAGAACACTGGGAAGCCAGGTATAG < 41bp 1 0.368767923865722 1 0.01156947016716 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 VASH1-AS1 ENSG00000258301;ENSG00000258610 ncRNA_exonic Human other chr14:77248471 chr14:77248479 . . 0 hm6A_associated_SNPs_15616 0 0 1 3 77248469 77248491 lncRNA hsa-miR-3144-3p AF111169.1 miRanda starBase2
14034 chr14 77248759 77248759 1 - T C rs528370995 77248750 - 77248730 77248770 41 GACCAGCCAGAATGAGACGGACTCCTTGACCTGGGAAGTCA GACCAGCCAGAGTGAGACGGACTCCTTGACCTGGGAAGTCA < 41bp 1 0.571247510821212 1 0.948769211769104 experiment 0.857504978357576 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 VASH1-AS1 ENSG00000258301 ncRNA_exonic Human lincRNA chr14:77248750 chr14:77248759 . . 0 hm6A_associated_SNPs_15617 0 0 1 1 77248741 77248765 lncRNA hsa-miR-561-5p VASH1-AS1 miRanda starBase2
14034 chr14 77582529 77582529 1 + G A rs78524269 77582514 + 77582494 77582534 41 CAACTTGGTAACATCCCTAGACTCCACTCATGAACGCAGAA CAACTTGGTAACATCCCTAGACTCCACTCATGAACACAGAA < 41bp 1 0.15253822134824 1 0.124420821666718 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 CIPC ENSG00000198894 UTR3 Human protein_coding chr14:77582514 chr14:77582529 . . 0 hm6A_associated_SNPs_15623 0 0 1 1 77582527 77582548 mRNA hsa-miR-214 KIAA1737 miRanda miRanda
14034 chr14 80328474 80328474 1 + C G rs188686243 80328463 + 80328443 80328483 41 GGAAAACCGTTTTTTAAAGGACACACACACACACAGCGATG GGAAAACCGTTTTTTAAAGGACACACACACAGACAGCGATG < 41bp 1 0.442653493151246 1 0.990875959396362 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 NRXN3 ENSG00000021645 UTR3 Human protein_coding chr14:80328463 chr14:80328474 . . 0 hm6A_associated_SNPs_15628 0 0 1 1 80328456 80328480 mRNA hsa-miR-138 NRXN3 miRanda miRanda
14034 chr14 89079034 89079034 1 + T C rs149251333 89079042 + 89079022 89079062 41 TAAATAGTATATTTTAAATGACAGAACTATAATTACAGAGA TAAATAGTATATCTTAAATGACAGAACTATAATTACAGAGA < 41bp 1 0.203195774050974 1 0.135872155427933 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 ZC3H14 ENSG00000100722;ENSG00000165521 UTR3 Human other chr14:89079042 chr14:89079034 . . 0 hm6A_associated_SNPs_15639 0 0 1 1 89079026 89079048 mRNA hsa-miR-544 ZC3H14 miRanda miRanda
14034 chr14 91691354 91691354 1 + T C rs1285859 91691366 + 91691346 91691386 41 GCAGGTGCTGTGGACAAAGGACAACATTTCTCTGGGGCTTT GCAGGTGCCGTGGACAAAGGACAACATTTCTCTGGGGCTTT < 41bp 1 0.740221242969404 1 0.967772722244263 experiment 0.519557514061192 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 C14orf159 ENSG00000133943 UTR3 Human protein_coding chr14:91691366 chr14:91691354 . . 0 hm6A_associated_SNPs_15653 0 0 0 1 91691334 91691357 mRNA hsa-miR-329 C14orf159 miRanda miRanda
14034 chr14 91691484 91691484 1 + C T rs80181220 91691502 + 91691482 91691522 41 CTCGACAGTTACTTATGGGGACACTTGTGAACAATTAACTG CTTGACAGTTACTTATGGGGACACTTGTGAACAATTAACTG < 41bp 1 0.554679799555311 1 0.958055973052979 experiment 0.890640400889378 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 3 C14orf159 ENSG00000133943 UTR3 Human protein_coding chr14:91691502 chr14:91691484 . . 0 hm6A_associated_SNPs_15654 0 0 0 1 91691463 91691485 mRNA hsa-miR-539 C14orf159 miRanda miRanda
14034 chr14 91691596 91691596 1 + C A rs139087658 91691578 + 91691558 91691598 41 TGTAGGATAGGATACTCCAGACTCCAGTCATCCTCCCCCAT TGTAGGATAGGATACTCCAGACTCCAGTCATCCTCCCCAAT < 41bp 1 0.340445688139433 1 0.657646179199219 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 39 C14orf159 ENSG00000133943 UTR3 Human protein_coding chr14:91691578 chr14:91691596 . . 0 hm6A_associated_SNPs_15659 0 0 1 1 91691596 91691615 mRNA hsa-miR-194 C14orf159 miRanda miRanda
14034 chr14 92629710 92629710 1 + C T rs546890061 92629693 + 92629673 92629713 41 TGTTAATGCAAAGTTTACAGACTTTTGATATGGAAAACCAG TGTTAATGCAAAGTTTACAGACTTTTGATATGGAAAATCAG < 41bp 1 0.161939258381718 1 0.50373500585556 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 CPSF2 ENSG00000165934 UTR3 Human protein_coding chr14:92629693 chr14:92629710 . . 0 hm6A_associated_SNPs_15665 0 0 1 1 92629708 92629729 mRNA hsa-miR-194 CPSF2 miRanda miRanda
14034 chr14 93306119 93306119 1 + T C rs142297799 93306102 + 93306082 93306122 41 GACCATCTGTATGTTAGGTGACATTGATTATGGGTTATAAT GACCATCTGTATGTTAGGTGACATTGATTATGGGTTACAAT < 41bp 1 0.758293396811849 1 0.0328108370304108 experiment 0.483413206376302 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 GOLGA5 ENSG00000066455 UTR3 Human protein_coding chr14:93306102 chr14:93306119 . . 0 hm6A_associated_SNPs_15677 0 0 1 2 93306107 93306128 mRNA hsa-miR-125b GOLGA5 miRanda miRanda
14034 chr14 93306119 93306119 1 + T C rs142297799 93306102 + 93306082 93306122 41 GACCATCTGTATGTTAGGTGACATTGATTATGGGTTATAAT GACCATCTGTATGTTAGGTGACATTGATTATGGGTTACAAT < 41bp 1 0.758293396811849 1 0.0328108370304108 experiment 0.483413206376302 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 GOLGA5 ENSG00000066455 UTR3 Human protein_coding chr14:93306102 chr14:93306119 . . 0 hm6A_associated_SNPs_15677 0 0 1 2 93306102 93306128 mRNA hsa-miR-125a-5p GOLGA5 miRanda miRanda
14034 chr14 93306119 93306119 1 + T C rs142297799 93306130 + 93306110 93306150 41 TATGGGTTATAATCAGGGAAACTAATTGTATTTAGTGACAA TATGGGTTACAATCAGGGAAACTAATTGTATTTAGTGACAA < 41bp 1 0.135831256005254 1 0.0326900780200958 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 GOLGA5 ENSG00000066455 UTR3 Human protein_coding chr14:93306130 chr14:93306119 . . 0 hm6A_associated_SNPs_15678 0 0 1 2 93306107 93306128 mRNA hsa-miR-125b GOLGA5 miRanda miRanda
14034 chr14 93306119 93306119 1 + T C rs142297799 93306130 + 93306110 93306150 41 TATGGGTTATAATCAGGGAAACTAATTGTATTTAGTGACAA TATGGGTTACAATCAGGGAAACTAATTGTATTTAGTGACAA < 41bp 1 0.135831256005254 1 0.0326900780200958 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 GOLGA5 ENSG00000066455 UTR3 Human protein_coding chr14:93306130 chr14:93306119 . . 0 hm6A_associated_SNPs_15678 0 0 1 2 93306102 93306128 mRNA hsa-miR-125a-5p GOLGA5 miRanda miRanda
14034 chr14 93694386 93694386 1 + G T rs75560192 93694381 + 93694361 93694401 41 GCTAAAGAAAACAGATCCTGACTTAGCTTACTTGAAATAAG GCTAAAGAAAACAGATCCTGACTTATCTTACTTGAAATAAG < 41bp 1 0.366392577158801 1 0.579218327999115 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 UBR7 ENSG00000012963 UTR3 Human protein_coding chr14:93694381 chr14:93694386 . . 0 hm6A_associated_SNPs_15679 0 0 1 3 93694375 93694396 mRNA hsa-miR-26a UBR7 miRanda miRanda
14034 chr14 93694386 93694386 1 + G T rs75560192 93694381 + 93694361 93694401 41 GCTAAAGAAAACAGATCCTGACTTAGCTTACTTGAAATAAG GCTAAAGAAAACAGATCCTGACTTATCTTACTTGAAATAAG < 41bp 1 0.366392577158801 1 0.579218327999115 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 UBR7 ENSG00000012963 UTR3 Human protein_coding chr14:93694381 chr14:93694386 . . 0 hm6A_associated_SNPs_15679 0 0 1 3 93694376 93694396 mRNA hsa-miR-26b UBR7 miRanda miRanda
14034 chr14 93694386 93694386 1 + G T rs75560192 93694381 + 93694361 93694401 41 GCTAAAGAAAACAGATCCTGACTTAGCTTACTTGAAATAAG GCTAAAGAAAACAGATCCTGACTTATCTTACTTGAAATAAG < 41bp 1 0.366392577158801 1 0.579218327999115 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 UBR7 ENSG00000012963 UTR3 Human protein_coding chr14:93694381 chr14:93694386 . . 0 hm6A_associated_SNPs_15679 0 0 1 3 93694380 93694396 mRNA hsa-miR-1297 UBR7 miRanda miRanda
14034 chr14 95059074 95059074 1 + A C rs118034465 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTCATGTGCTGTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.097889593337776 1 0.397709369659424 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059074 . . 0 hm6A_associated_SNPs_15696 0 0 1 2 95059070 95059088 mRNA hsa-miR-377 SERPINA5 miRanda miRanda
14034 chr14 95059074 95059074 1 + A C rs118034465 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTCATGTGCTGTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.097889593337776 1 0.397709369659424 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059074 . . 0 hm6A_associated_SNPs_15696 0 0 1 2 95059062 95059088 mRNA hsa-miR-421 SERPINA5 miRanda miRanda
14034 chr14 95059076 95059076 1 + T C rs9113 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTAACGTGCTGTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.100359445745306 1 0.519467711448669 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059076 . . 0 hm6A_associated_SNPs_15697 0 0 0 2 95059070 95059088 mRNA hsa-miR-377 SERPINA5 miRanda miRanda
14034 chr14 95059076 95059076 1 + T C rs9113 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTAACGTGCTGTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.100359445745306 1 0.519467711448669 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059076 . . 0 hm6A_associated_SNPs_15697 0 0 0 2 95059062 95059088 mRNA hsa-miR-421 SERPINA5 miRanda miRanda
14034 chr14 95059080 95059080 1 + C A rs181351055 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTAATGTGATGTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.104073815653138 1 0.534476757049561 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059080 . . 0 hm6A_associated_SNPs_15698 0 0 0 2 95059070 95059088 mRNA hsa-miR-377 SERPINA5 miRanda miRanda
14034 chr14 95059080 95059080 1 + C A rs181351055 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTAATGTGATGTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.104073815653138 1 0.534476757049561 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059080 . . 0 hm6A_associated_SNPs_15698 0 0 0 2 95059062 95059088 mRNA hsa-miR-421 SERPINA5 miRanda miRanda
14034 chr14 95059082 95059082 1 + G C rs115571396 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTAATGTGCTCTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.107083393542814 1 0.460847467184067 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 16 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059082 . . 0 hm6A_associated_SNPs_15699 0 0 0 2 95059070 95059088 mRNA hsa-miR-377 SERPINA5 miRanda miRanda
14034 chr14 95059082 95059082 1 + G C rs115571396 95059087 + 95059067 95059107 41 CAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCCC CAGTCCTAATGTGCTCTGTGACATTGGGACAACACTTTCCC < 41bp 1 0.107083393542814 1 0.460847467184067 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 16 SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059087 chr14:95059082 . . 0 hm6A_associated_SNPs_15699 0 0 0 2 95059062 95059088 mRNA hsa-miR-421 SERPINA5 miRanda miRanda
14034 chr14 95078744 95078744 1 + G A rs45481092 95078738 + 95078718 95078758 41 ATGAAAATCCACTACTCCAGACAGACGGCTTTGGAATCCAC ATGAAAATCCACTACTCCAGACAGACAGCTTTGGAATCCAC < 41bp 1 0.0870909346485908 1 0.011297881603241 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 27 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95078738 chr14:95078744 synonymous SNV . 0 hm6A_associated_SNPs_15700 0 0 1 1 95078739 95078763 mRNA hsa-miR-138 SERPINA3 miRanda miRanda
14034 chr14 95081391 95081391 1 + A G rs138042195 95081371 + 95081351 95081391 41 AATCACAGATCTGATCAAGGACCTTGACTCGCAGACAATGA AATCACAGATCTGATCAAGGACCTTGACTCGCAGACAATGG < 41bp 1 0.346838327919296 1 0.997692227363586 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081371 chr14:95081391 nonsynonymous SNV 0.150 1 hm6A_associated_SNPs_15706 0 0 1 1 95081383 95081404 mRNA hsa-miR-197 SERPINA3 miRanda miRanda
14034 chr14 95081391 95081391 1 + A G rs138042195 95081377 + 95081357 95081397 41 AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC AGATCTGATCAAGGACCTTGACTCGCAGACAATGGTGGTCC < 41bp 1 0.211521142352079 1 0.988998234272003 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 35 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081377 chr14:95081391 nonsynonymous SNV 0.150 1 hm6A_associated_SNPs_15707 0 0 1 1 95081383 95081404 mRNA hsa-miR-197 SERPINA3 miRanda miRanda
14034 chr14 95081391 95081391 1 + A G rs138042195 95081385 + 95081365 95081405 41 TCAAGGACCTTGACTCGCAGACAATGATGGTCCTGGTGAAT TCAAGGACCTTGACTCGCAGACAATGGTGGTCCTGGTGAAT < 41bp 1 0.701647168605786 1 0.980734944343567 experiment 0.596705662788428 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26593424;GSE73405;miCLIP;HepG2;Control 27 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081385 chr14:95081391 nonsynonymous SNV 0.150 1 hm6A_associated_SNPs_15708 0 0 1 1 95081383 95081404 mRNA hsa-miR-197 SERPINA3 miRanda miRanda
14034 chr14 96010866 96010866 1 + A G rs960 96010879 + 96010859 96010899 41 AATGGTGAACAAAAAAAGAAACTGTGATAACTGGGGCGTTG AATGGTGGACAAAAAAAGAAACTGTGATAACTGGGGCGTTG < 41bp 1 0.617748445643515 1 0.932443261146545 experiment 0.76450310871297 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 GLRX5 ENSG00000182512 UTR3 Human protein_coding chr14:96010879 chr14:96010866 . . 0 hm6A_associated_SNPs_15710 0 0 1 6 96010866 96010886 mRNA hsa-miR-27a GLRX5 miRanda miRanda
14034 chr14 96010866 96010866 1 + A G rs960 96010879 + 96010859 96010899 41 AATGGTGAACAAAAAAAGAAACTGTGATAACTGGGGCGTTG AATGGTGGACAAAAAAAGAAACTGTGATAACTGGGGCGTTG < 41bp 1 0.617748445643515 1 0.932443261146545 experiment 0.76450310871297 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 GLRX5 ENSG00000182512 UTR3 Human protein_coding chr14:96010879 chr14:96010866 . . 0 hm6A_associated_SNPs_15710 0 0 1 6 96010846 96010867 mRNA hsa-miR-197 GLRX5 miRanda miRanda
14034 chr14 96010866 96010866 1 + A G rs960 96010879 + 96010859 96010899 41 AATGGTGAACAAAAAAAGAAACTGTGATAACTGGGGCGTTG AATGGTGGACAAAAAAAGAAACTGTGATAACTGGGGCGTTG < 41bp 1 0.617748445643515 1 0.932443261146545 experiment 0.76450310871297 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 GLRX5 ENSG00000182512 UTR3 Human protein_coding chr14:96010879 chr14:96010866 . . 0 hm6A_associated_SNPs_15710 0 0 1 6 96010854 96010874 mRNA hsa-miR-129-5p GLRX5 miRanda miRanda
14034 chr14 96010866 96010866 1 + A G rs960 96010879 + 96010859 96010899 41 AATGGTGAACAAAAAAAGAAACTGTGATAACTGGGGCGTTG AATGGTGGACAAAAAAAGAAACTGTGATAACTGGGGCGTTG < 41bp 1 0.617748445643515 1 0.932443261146545 experiment 0.76450310871297 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 GLRX5 ENSG00000182512 UTR3 Human protein_coding chr14:96010879 chr14:96010866 . . 0 hm6A_associated_SNPs_15710 0 0 1 6 96010866 96010886 mRNA hsa-miR-27b GLRX5 miRanda miRanda
14034 chr14 96010866 96010866 1 + A G rs960 96010879 + 96010859 96010899 41 AATGGTGAACAAAAAAAGAAACTGTGATAACTGGGGCGTTG AATGGTGGACAAAAAAAGAAACTGTGATAACTGGGGCGTTG < 41bp 1 0.617748445643515 1 0.932443261146545 experiment 0.76450310871297 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 GLRX5 ENSG00000182512 UTR3 Human protein_coding chr14:96010879 chr14:96010866 . . 0 hm6A_associated_SNPs_15710 0 0 1 6 96010865 96010885 mRNA hsa-miR-128 GLRX5 miRanda miRanda
14034 chr14 96010866 96010866 1 + A G rs960 96010879 + 96010859 96010899 41 AATGGTGAACAAAAAAAGAAACTGTGATAACTGGGGCGTTG AATGGTGGACAAAAAAAGAAACTGTGATAACTGGGGCGTTG < 41bp 1 0.617748445643515 1 0.932443261146545 experiment 0.76450310871297 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 GLRX5 ENSG00000182512 UTR3 Human protein_coding chr14:96010879 chr14:96010866 . . 0 hm6A_associated_SNPs_15710 0 0 1 6 96010850 96010871 mRNA hsa-miR-375 GLRX5 miRanda miRanda
14034 chr14 100996550 100996550 1 + G A rs140012390 100996558 + 100996538 100996578 41 TTTGCCTCAGGAGTGTGAGGACTACACTAGTGAAAGCGCCT TTTGCCTCAGGAATGTGAGGACTACACTAGTGAAAGCGCCT < 41bp 1 0.369705333623871 1 0.621760547161102 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 WDR25 ENSG00000176473 UTR3 Human protein_coding chr14:100996558 chr14:100996550 . . 0 hm6A_associated_SNPs_15742 0 0 1 2 100996543 100996566 mRNA hsa-miR-196a WDR25 miRanda miRanda
14034 chr14 100996550 100996550 1 + G A rs140012390 100996558 + 100996538 100996578 41 TTTGCCTCAGGAGTGTGAGGACTACACTAGTGAAAGCGCCT TTTGCCTCAGGAATGTGAGGACTACACTAGTGAAAGCGCCT < 41bp 1 0.369705333623871 1 0.621760547161102 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 WDR25 ENSG00000176473 UTR3 Human protein_coding chr14:100996558 chr14:100996550 . . 0 hm6A_associated_SNPs_15742 0 0 1 2 100996535 100996557 mRNA hsa-miR-342-3p WDR25 miRanda miRanda
14034 chr14 100996557 100996557 1 + G T rs80150209 100996558 + 100996538 100996578 41 TTTGCCTCAGGAGTGTGAGGACTACACTAGTGAAAGCGCCT TTTGCCTCAGGAGTGTGAGTACTACACTAGTGAAAGCGCCT Direct Loss 1 0.28721340774549 1 0.188909769058228 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 WDR25 ENSG00000176473 UTR3 Human protein_coding chr14:100996558 chr14:100996557 . . 0 hm6A_associated_SNPs_15743 0 0 1 2 100996543 100996566 mRNA hsa-miR-196a WDR25 miRanda miRanda
14034 chr14 100996557 100996557 1 + G T rs80150209 100996558 + 100996538 100996578 41 TTTGCCTCAGGAGTGTGAGGACTACACTAGTGAAAGCGCCT TTTGCCTCAGGAGTGTGAGTACTACACTAGTGAAAGCGCCT Direct Loss 1 0.28721340774549 1 0.188909769058228 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 WDR25 ENSG00000176473 UTR3 Human protein_coding chr14:100996558 chr14:100996557 . . 0 hm6A_associated_SNPs_15743 0 0 1 2 100996535 100996557 mRNA hsa-miR-342-3p WDR25 miRanda miRanda
14034 chr14 102393308 102393308 1 + A G rs139573269 102393302 + 102393282 102393322 41 AATACTTCCTGAGAAACTTGACAAGTATCTCTCCATTTTAC AATACTTCCTGAGAAACTTGACAAGTGTCTCTCCATTTTAC < 41bp 1 0.4287432299581 1 0.64687180519104 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 PPP2R5C ENSG00000078304 UTR3 Human protein_coding chr14:102393302 chr14:102393308 . . 0 hm6A_associated_SNPs_15748 0 0 1 1 102393291 102393316 mRNA hsa-miR-185 PPP2R5C miRanda miRanda
14034 chr14 102966252 102966252 1 + A G rs113701543 102966245 + 102966225 102966265 41 ATGCCGAAATCCCAGATCTGACTTCACACTTCCCTTTTCTA ATGCCGAAATCCCAGATCTGACTTCACGCTTCCCTTTTCTA < 41bp 1 0.268369384605278 1 0.531148731708527 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 TECPR2 ENSG00000196663 UTR3 Human protein_coding chr14:102966245 chr14:102966252 . . 0 hm6A_associated_SNPs_15767 0 0 1 1 102966236 102966258 mRNA hsa-miR-1 TECPR2 miRanda miRanda
14034 chr14 103193532 103193532 1 + T A rs576520449 103193547 + 103193527 103193567 41 GTAGCTTAAAGGGAACGTGGACCTCAATGCTTTCTGCCTTC GTAGCATAAAGGGAACGTGGACCTCAATGCTTTCTGCCTTC < 41bp 1 0.633711456342327 1 0.921060562133789 experiment 0.732577087315346 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RCOR1 ENSG00000089902 UTR3 Human protein_coding chr14:103193547 chr14:103193532 . . 0 hm6A_associated_SNPs_15772 0 0 1 2 103193520 103193541 mRNA hsa-miR-204 RCOR1 miRanda miRanda
14034 chr14 103193532 103193532 1 + T A rs576520449 103193547 + 103193527 103193567 41 GTAGCTTAAAGGGAACGTGGACCTCAATGCTTTCTGCCTTC GTAGCATAAAGGGAACGTGGACCTCAATGCTTTCTGCCTTC < 41bp 1 0.633711456342327 1 0.921060562133789 experiment 0.732577087315346 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 RCOR1 ENSG00000089902 UTR3 Human protein_coding chr14:103193547 chr14:103193532 . . 0 hm6A_associated_SNPs_15772 0 0 1 2 103193520 103193541 mRNA hsa-miR-211 RCOR1 miRanda miRanda
14034 chr14 103194121 103194121 1 + T G rs77721803 103194101 + 103194081 103194121 41 CTGTAATGCCTTTTGGTTGGACTGGGAACAAGTAAAAATTT CTGTAATGCCTTTTGGTTGGACTGGGAACAAGTAAAAATTG < 41bp 1 0.31130006630428 1 0.905980229377747 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;Control 41 RCOR1 ENSG00000089902 UTR3 Human protein_coding chr14:103194101 chr14:103194121 . . 0 hm6A_associated_SNPs_15773 0 0 1 1 103194114 103194134 mRNA hsa-miR-590-3p RCOR1 miRanda miRanda
14034 chr14 103809446 103809446 1 + G A rs77088283 103809448 + 103809428 103809468 41 TCTTCACTTTGCTCTATTGAACTGTCTTAAGGATTTGTTTA TCTTCACTTTGCTCTATTAAACTGTCTTAAGGATTTGTTTA < 41bp 1 0.118892705917663 1 0.211860328912735 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 EIF5 ENSG00000100664 UTR3 Human protein_coding chr14:103809448 chr14:103809446 . . 0 hm6A_associated_SNPs_15792 0 0 1 2 103809427 103809448 mRNA hsa-miR-376a EIF5 miRanda miRanda
14034 chr14 103809446 103809446 1 + G A rs77088283 103809448 + 103809428 103809468 41 TCTTCACTTTGCTCTATTGAACTGTCTTAAGGATTTGTTTA TCTTCACTTTGCTCTATTAAACTGTCTTAAGGATTTGTTTA < 41bp 1 0.118892705917663 1 0.211860328912735 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 EIF5 ENSG00000100664 UTR3 Human protein_coding chr14:103809448 chr14:103809446 . . 0 hm6A_associated_SNPs_15792 0 0 1 2 103809426 103809448 mRNA hsa-miR-376b EIF5 miRanda miRanda
14034 chr14 103969956 103969956 1 + C T rs146208234 103969944 + 103969924 103969964 41 GGAGATCATCCGGTGCTAAAACATTACAGTTGCCAAGGAGG GGAGATCATCCGGTGCTAAAACATTACAGTTGTCAAGGAGG < 41bp 1 0.720597153014976 1 0.943630814552307 experiment 0.558805693970047 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MARK3 ENSG00000075413 UTR3 Human protein_coding chr14:103969944 chr14:103969956 . . 0 hm6A_associated_SNPs_15802 0 0 1 3 103969937 103969960 mRNA hsa-miR-182 MARK3 miRanda miRanda
14034 chr14 103969956 103969956 1 + C T rs146208234 103969944 + 103969924 103969964 41 GGAGATCATCCGGTGCTAAAACATTACAGTTGCCAAGGAGG GGAGATCATCCGGTGCTAAAACATTACAGTTGTCAAGGAGG < 41bp 1 0.720597153014976 1 0.943630814552307 experiment 0.558805693970047 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MARK3 ENSG00000075413 UTR3 Human protein_coding chr14:103969944 chr14:103969956 . . 0 hm6A_associated_SNPs_15802 0 0 1 3 103969956 103969975 mRNA hsa-miR-144 MARK3 miRanda miRanda
14034 chr14 103969956 103969956 1 + C T rs146208234 103969944 + 103969924 103969964 41 GGAGATCATCCGGTGCTAAAACATTACAGTTGCCAAGGAGG GGAGATCATCCGGTGCTAAAACATTACAGTTGTCAAGGAGG < 41bp 1 0.720597153014976 1 0.943630814552307 experiment 0.558805693970047 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MARK3 ENSG00000075413 UTR3 Human protein_coding chr14:103969944 chr14:103969956 . . 0 hm6A_associated_SNPs_15802 0 0 1 3 103969953 103969974 mRNA hsa-miR-496 MARK3 miRanda miRanda
14034 chr14 104057184 104057184 1 + G A rs114094075 104057175 + 104057155 104057195 41 ACTGCACTCCAGCCTGGAAGACCAAACGAGACTCTGTATCA ACTGCACTCCAGCCTGGAAGACCAAACGAAACTCTGTATCA < 41bp 1 0.294661994995104 1 0.839556992053986 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 30 APOPT1 ENSG00000256053 UTR3 Human protein_coding chr14:104057175 chr14:104057184 . . 0 hm6A_associated_SNPs_15815 0 0 1 1 104057180 104057200 mRNA hsa-miR-129-5p C14orf153 miRanda miRanda
14034 chr14 104057184 104057184 1 + G A rs114094075 104057185 + 104057165 104057205 41 AGCCTGGAAGACCAAACGAGACTCTGTATCAAAAAATAATA AGCCTGGAAGACCAAACGAAACTCTGTATCAAAAAATAATA < 41bp 1 0.250086656437574 1 0.831702828407288 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 APOPT1 ENSG00000256053 UTR3 Human protein_coding chr14:104057185 chr14:104057184 . . 0 hm6A_associated_SNPs_15816 0 0 1 1 104057180 104057200 mRNA hsa-miR-129-5p C14orf153 miRanda miRanda
14034 chr14 104646410 104646410 1 + C T rs566755943 104646416 + 104646396 104646436 41 TTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTGTTC TTTGGTGCTACAGATTTGAGACACCAGCAGAAGTTGTGTTC < 41bp 1 0.727409772613747 1 0.976128339767456 experiment 0.545180454772505 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 KIF26A ENSG00000066735 UTR3 Human protein_coding chr14:104646416 chr14:104646410 . . 0 hm6A_associated_SNPs_15831 0 0 1 1 104646402 104646424 mRNA hsa-miR-138 KIF26A miRanda miRanda
14034 chr14 104646728 104646728 1 + G A rs1107254 104646739 + 104646719 104646759 41 CTCTGTCCCGAGGGCAGCTAACAAGGGCTGAGCCCCAGGTA CTCTGTCCCAAGGGCAGCTAACAAGGGCTGAGCCCCAGGTA < 41bp 1 0.441731757613518 1 0.858346104621887 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 KIF26A ENSG00000066735 UTR3 Human protein_coding chr14:104646739 chr14:104646728 . . 0 hm6A_associated_SNPs_15832 0 0 0 1 104646717 104646738 mRNA hsa-miR-22 KIF26A miRanda miRanda
14034 chr14 105170644 105170644 1 + C T rs546960017 105170656 + 105170636 105170676 41 CACGTGGACGCAAGATGGAGACAGGGACACGGGCTCCAGGG CACGTGGATGCAAGATGGAGACAGGGACACGGGCTCCAGGG < 41bp 1 0.359814590774284 1 0.254678964614868 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 INF2 ENSG00000203485 UTR3 Human protein_coding chr14:105170656 chr14:105170644 . . 0 hm6A_associated_SNPs_15835 0 0 0 3 105170627 105170649 mRNA hsa-miR-133a INF2 miRanda miRanda
14034 chr14 105170644 105170644 1 + C T rs546960017 105170656 + 105170636 105170676 41 CACGTGGACGCAAGATGGAGACAGGGACACGGGCTCCAGGG CACGTGGATGCAAGATGGAGACAGGGACACGGGCTCCAGGG < 41bp 1 0.359814590774284 1 0.254678964614868 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 INF2 ENSG00000203485 UTR3 Human protein_coding chr14:105170656 chr14:105170644 . . 0 hm6A_associated_SNPs_15835 0 0 0 3 105170641 105170662 mRNA hsa-miR-339-5p INF2 miRanda miRanda
14034 chr14 105170644 105170644 1 + C T rs546960017 105170656 + 105170636 105170676 41 CACGTGGACGCAAGATGGAGACAGGGACACGGGCTCCAGGG CACGTGGATGCAAGATGGAGACAGGGACACGGGCTCCAGGG < 41bp 1 0.359814590774284 1 0.254678964614868 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 INF2 ENSG00000203485 UTR3 Human protein_coding chr14:105170656 chr14:105170644 . . 0 hm6A_associated_SNPs_15835 0 0 0 3 105170627 105170649 mRNA hsa-miR-133b INF2 miRanda miRanda
14034 chr14 105170644 105170644 1 + C T rs546960017 105170662 + 105170642 105170682 41 GACGCAAGATGGAGACAGGGACACGGGCTCCAGGGCGAGAG GATGCAAGATGGAGACAGGGACACGGGCTCCAGGGCGAGAG < 41bp 1 0.458730365394388 1 0.322970449924469 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 INF2 ENSG00000203485 UTR3 Human protein_coding chr14:105170662 chr14:105170644 . . 0 hm6A_associated_SNPs_15836 0 0 0 3 105170627 105170649 mRNA hsa-miR-133a INF2 miRanda miRanda
14034 chr14 105170644 105170644 1 + C T rs546960017 105170662 + 105170642 105170682 41 GACGCAAGATGGAGACAGGGACACGGGCTCCAGGGCGAGAG GATGCAAGATGGAGACAGGGACACGGGCTCCAGGGCGAGAG < 41bp 1 0.458730365394388 1 0.322970449924469 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 INF2 ENSG00000203485 UTR3 Human protein_coding chr14:105170662 chr14:105170644 . . 0 hm6A_associated_SNPs_15836 0 0 0 3 105170641 105170662 mRNA hsa-miR-339-5p INF2 miRanda miRanda
14034 chr14 105170644 105170644 1 + C T rs546960017 105170662 + 105170642 105170682 41 GACGCAAGATGGAGACAGGGACACGGGCTCCAGGGCGAGAG GATGCAAGATGGAGACAGGGACACGGGCTCCAGGGCGAGAG < 41bp 1 0.458730365394388 1 0.322970449924469 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 INF2 ENSG00000203485 UTR3 Human protein_coding chr14:105170662 chr14:105170644 . . 0 hm6A_associated_SNPs_15836 0 0 0 3 105170627 105170649 mRNA hsa-miR-133b INF2 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225971 105225993 mRNA hsa-miR-19a SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225973 105225993 mRNA hsa-miR-19b SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225972 105225994 mRNA hsa-miR-130a SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225957 105225979 mRNA hsa-miR-154 SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225972 105225994 mRNA hsa-miR-301a SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225973 105225994 mRNA hsa-miR-130b SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225965 105225986 mRNA hsa-miR-340 SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225971 105225994 mRNA hsa-miR-454 SIVA1 miRanda miRanda
14034 chr14 105225979 105225979 1 + C G rs1133044 105225962 + 105225942 105225982 41 TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTT TTCTATTTTGTATCCTAATGACAGAATGAATAAACCTGTTT < 41bp 1 0.300074019184892 1 0.8971107006073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 SIVA1 ENSG00000184990 UTR3 Human protein_coding chr14:105225962 chr14:105225979 . . 0 hm6A_associated_SNPs_15838 0 0 1 9 105225972 105225994 mRNA hsa-miR-301b SIVA1 miRanda miRanda
14034 chr15 23003164 23003164 1 + A G rs143454158 23003168 + 23003148 23003188 41 GGGTGCTTTTCGATCTAAAAACTTAATTTTATAAAATTGAC GGGTGCTTTTCGATCTGAAAACTTAATTTTATAAAATTGAC < 41bp 1 0.34298943168808 1 0.766435384750366 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 CYFIP1 ENSG00000068793 UTR3 Human other chr15:23003168 chr15:23003164 . . 0 hm6A_associated_SNPs_15864 0 0 1 2 23003155 23003181 mRNA hsa-miR-340 CYFIP1 miRanda miRanda
14034 chr15 23003164 23003164 1 + A G rs143454158 23003168 + 23003148 23003188 41 GGGTGCTTTTCGATCTAAAAACTTAATTTTATAAAATTGAC GGGTGCTTTTCGATCTGAAAACTTAATTTTATAAAATTGAC < 41bp 1 0.34298943168808 1 0.766435384750366 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 CYFIP1 ENSG00000068793 UTR3 Human other chr15:23003168 chr15:23003164 . . 0 hm6A_associated_SNPs_15864 0 0 1 2 23003164 23003186 mRNA hsa-miR-590-3p CYFIP1 miRanda miRanda
14034 chr15 23003403 23003403 1 + G A rs1050137 23003406 + 23003386 23003426 41 GCCAGTTACCATTAACTGTAACTATTTAGCTTTTGTTTAGG GCCAGTTACCATTAACTATAACTATTTAGCTTTTGTTTAGG < 41bp 1 0.108602311241474 1 0.0176348090171814 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 CYFIP1 ENSG00000068793 UTR3 Human other chr15:23003406 chr15:23003403 . . 0 hm6A_associated_SNPs_15865 0 0 1 1 23003385 23003407 mRNA hsa-miR-139-5p CYFIP1 miRanda miRanda
14034 chr15 25219562 25219562 1 + G A rs75184959 25219575 + 25219555 25219595 41 GCATCAAGTTTTAACTGTGGACATTGGATTTGGTGGAACAG GCATCAAATTTTAACTGTGGACATTGGATTTGGTGGAACAG < 41bp 1 0.32891837671308 1 0.772249460220337 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 SNHG14 ENSG00000128739;ENSG00000273173 UTR5;UTR3 Human other chr15:25219575 chr15:25219562 . . 0 hm6A_associated_SNPs_15868 1 0 1 2 25219556 25219575 mRNA hsa-miR-27a SNURF miRanda miRanda
14034 chr15 25219562 25219562 1 + G A rs75184959 25219575 + 25219555 25219595 41 GCATCAAGTTTTAACTGTGGACATTGGATTTGGTGGAACAG GCATCAAATTTTAACTGTGGACATTGGATTTGGTGGAACAG < 41bp 1 0.32891837671308 1 0.772249460220337 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 SNHG14 ENSG00000128739;ENSG00000273173 UTR5;UTR3 Human other chr15:25219575 chr15:25219562 . . 0 hm6A_associated_SNPs_15868 1 0 1 2 25219556 25219575 mRNA hsa-miR-27b SNURF miRanda miRanda
14034 chr15 25227184 25227184 1 + A G rs558032434 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AGAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT < 41bp 1 0.21436866596875 1 0.2869733273983 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227184 . . 0 hm6A_associated_SNPs_15869 0 0 1 5 25227163 25227184 mRNA hsa-miR-203 PAR-SN miRanda miRanda
14034 chr15 25227184 25227184 1 + A G rs558032434 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AGAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT < 41bp 1 0.21436866596875 1 0.2869733273983 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227184 . . 0 hm6A_associated_SNPs_15869 0 0 1 5 25227163 25227184 mRNA hsa-miR-203 SNRPN miRanda miRanda
14034 chr15 25227184 25227184 1 + A G rs558032434 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AGAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT < 41bp 1 0.21436866596875 1 0.2869733273983 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227184 . . 0 hm6A_associated_SNPs_15869 0 0 1 5 25227174 25227193 mRNA hsa-miR-371-5p PAR-SN miRanda miRanda
14034 chr15 25227184 25227184 1 + A G rs558032434 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AGAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT < 41bp 1 0.21436866596875 1 0.2869733273983 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227184 . . 0 hm6A_associated_SNPs_15869 0 0 1 5 25227174 25227193 mRNA hsa-miR-371-5p SNRPN miRanda miRanda
14034 chr15 25227184 25227184 1 + A G rs558032434 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AGAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT < 41bp 1 0.21436866596875 1 0.2869733273983 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227184 . . 0 hm6A_associated_SNPs_15869 0 0 1 5 25227169 25227189 mRNA hsa-miR-590-3p SNRPN miRanda miRanda
14034 chr15 25328761 25328761 1 + A G rs140200064 25328778 + 25328758 25328798 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACGTTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.08317683876573 1 0.465414881706238 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 SNORD116-17;SNORD116-19 ENSG00000206656 ncRNA_exonic Human snoRNA chr15:25328778 chr15:25328761 . . 0 hm6A_associated_SNPs_15871 0 0 0 3 25328745 25328766 mRNA hsa-miR-1 SNORD116-17 miRanda miRanda
14034 chr15 25328761 25328761 1 + A G rs140200064 25328778 + 25328758 25328798 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACGTTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.08317683876573 1 0.465414881706238 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 SNORD116-17;SNORD116-19 ENSG00000206656 ncRNA_exonic Human snoRNA chr15:25328778 chr15:25328761 . . 0 hm6A_associated_SNPs_15871 0 0 0 3 25328741 25328766 mRNA hsa-miR-206 SNORD116-17 miRanda miRanda
14034 chr15 25328761 25328761 1 + A G rs140200064 25328778 + 25328758 25328798 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACGTTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.08317683876573 1 0.465414881706238 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 SNORD116-17;SNORD116-19 ENSG00000206656 ncRNA_exonic Human snoRNA chr15:25328778 chr15:25328761 . . 0 hm6A_associated_SNPs_15871 0 0 0 3 25328747 25328766 mRNA hsa-miR-613 SNORD116-17 miRanda miRanda
14034 chr15 25332860 25332860 1 + A C rs143810066 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCTTGGAAAGCTGAACAAAATGCGTGAAAACTCTA < 41bp 1 0.275197677900542 1 0.459477484226227 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332860 . . 0 hm6A_associated_SNPs_15873 0 0 1 2 25332860 25332879 mRNA hsa-miR-144 SNORD116-21 miRanda miRanda
14034 chr15 25332860 25332860 1 + A C rs143810066 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCTTGGAAAGCTGAACAAAATGCGTGAAAACTCTA < 41bp 1 0.275197677900542 1 0.459477484226227 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332860 . . 0 hm6A_associated_SNPs_15873 0 0 1 2 25332860 25332879 lncRNA hsa-miR-144-3p AC124312.3 miRanda starBase2
14034 chr15 25333974 25333974 1 + T C rs376204702 25333994 + 25333974 25334014 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA CACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0959902217118816 1 0.78731369972229 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 SNORD116-21 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25333994 chr15:25333974 . . 0 hm6A_associated_SNPs_15874 0 0 1 6 25333961 25333982 mRNA hsa-miR-1 SNORD116-21 miRanda miRanda
14034 chr15 25333974 25333974 1 + T C rs376204702 25333994 + 25333974 25334014 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA CACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0959902217118816 1 0.78731369972229 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 SNORD116-21 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25333994 chr15:25333974 . . 0 hm6A_associated_SNPs_15874 0 0 1 6 25333957 25333982 mRNA hsa-miR-206 SNORD116-21 miRanda miRanda
14034 chr15 25333974 25333974 1 + T C rs376204702 25333994 + 25333974 25334014 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA CACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0959902217118816 1 0.78731369972229 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 SNORD116-21 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25333994 chr15:25333974 . . 0 hm6A_associated_SNPs_15874 0 0 1 6 25333963 25333982 mRNA hsa-miR-613 SNORD116-21 miRanda miRanda
14034 chr15 25333974 25333974 1 + T C rs376204702 25333994 + 25333974 25334014 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA CACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0959902217118816 1 0.78731369972229 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 SNORD116-21 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25333994 chr15:25333974 . . 0 hm6A_associated_SNPs_15874 0 0 1 6 25333961 25333982 lncRNA hsa-miR-1-3p AC124312.3 miRanda starBase2
14034 chr15 25333974 25333974 1 + T C rs376204702 25333994 + 25333974 25334014 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA CACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0959902217118816 1 0.78731369972229 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 SNORD116-21 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25333994 chr15:25333974 . . 0 hm6A_associated_SNPs_15874 0 0 1 6 25333957 25333982 lncRNA hsa-miR-206 AC124312.3 miRanda starBase2
14034 chr15 25333974 25333974 1 + T C rs376204702 25333994 + 25333974 25334014 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA CACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0959902217118816 1 0.78731369972229 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 SNORD116-21 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25333994 chr15:25333974 . . 0 hm6A_associated_SNPs_15874 0 0 1 6 25333963 25333982 lncRNA hsa-miR-613 AC124312.3 miRanda starBase2
14034 chr15 28901116 28901116 1 + G A rs529300317 28901129 + 28901109 28901149 41 AATCACCGTGCAGTTCTCTGACATGCGGACGTGTCGCGTTT AATCACCATGCAGTTCTCTGACATGCGGACGTGTCGCGTTT < 41bp 1 0.333466771620469 1 0.985852062702179 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901129 chr15:28901116 . . 0 hm6A_associated_SNPs_15877 0 0 0 2 28901106 28901127 mRNA hsa-miR-146a LOC440248 miRanda miRanda
14034 chr15 28901116 28901116 1 + G A rs529300317 28901129 + 28901109 28901149 41 AATCACCGTGCAGTTCTCTGACATGCGGACGTGTCGCGTTT AATCACCATGCAGTTCTCTGACATGCGGACGTGTCGCGTTT < 41bp 1 0.333466771620469 1 0.985852062702179 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901129 chr15:28901116 . . 0 hm6A_associated_SNPs_15877 0 0 0 2 28901106 28901127 mRNA hsa-miR-146b-5p LOC440248 miRanda miRanda
14034 chr15 28901120 28901120 1 + A C rs542994552 28901129 + 28901109 28901149 41 AATCACCGTGCAGTTCTCTGACATGCGGACGTGTCGCGTTT AATCACCGTGCCGTTCTCTGACATGCGGACGTGTCGCGTTT < 41bp 1 0.344497874393199 1 0.988390624523163 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901129 chr15:28901120 . . 0 hm6A_associated_SNPs_15878 0 0 0 2 28901106 28901127 mRNA hsa-miR-146a LOC440248 miRanda miRanda
14034 chr15 28901120 28901120 1 + A C rs542994552 28901129 + 28901109 28901149 41 AATCACCGTGCAGTTCTCTGACATGCGGACGTGTCGCGTTT AATCACCGTGCCGTTCTCTGACATGCGGACGTGTCGCGTTT < 41bp 1 0.344497874393199 1 0.988390624523163 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901129 chr15:28901120 . . 0 hm6A_associated_SNPs_15878 0 0 0 2 28901106 28901127 mRNA hsa-miR-146b-5p LOC440248 miRanda miRanda
14034 chr15 31060542 31060542 1 + A T rs1071933 31060543 + 31060523 31060563 41 CATGAAAACATTGATCTTGAACATCTTCATCAGAGCTCTTG CATGAAAACATTGATCTTGTACATCTTCATCAGAGCTCTTG Direct Loss 1 0.0999834792882782 1 0.100234001874924 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 20 LOC100288637 ENSG00000187951;ENSG00000103832 intergenic Human other chr15:31060543 chr15:31060542 . . 0 hm6A_associated_SNPs_15891 0 0 1 2 31060530 31060552 mRNA hsa-miR-203 MGC131512 miRanda miRanda
14034 chr15 31060542 31060542 1 + A T rs1071933 31060543 + 31060523 31060563 41 CATGAAAACATTGATCTTGAACATCTTCATCAGAGCTCTTG CATGAAAACATTGATCTTGTACATCTTCATCAGAGCTCTTG Direct Loss 1 0.0999834792882782 1 0.100234001874924 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 20 LOC100288637 ENSG00000187951;ENSG00000103832 intergenic Human other chr15:31060543 chr15:31060542 . . 0 hm6A_associated_SNPs_15891 0 0 1 2 31060542 31060564 mRNA hsa-miR-335 MGC131512 miRanda miRanda
14034 chr15 34522179 34522179 1 + T C rs7598 34522167 + 34522147 34522187 41 CAATGTGCATATTACGACAAACACAAAGAAACTATACCATA CAATGTGCATATTACGACAAACACAAAGAAACCATACCATA < 41bp 1 0.520053659140865 1 0.363775491714478 experiment 0.95989268171827 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 EMC4 ENSG00000128463 UTR3 Human protein_coding chr15:34522167 chr15:34522179 . . 0 hm6A_associated_SNPs_15928 0 0 1 1 34522169 34522192 mRNA hsa-miR-154 TMEM85 miRanda miRanda
14034 chr15 34522179 34522179 1 + T C rs7598 34522177 + 34522157 34522197 41 ATTACGACAAACACAAAGAAACTATACCATAACCCAAGGCT ATTACGACAAACACAAAGAAACCATACCATAACCCAAGGCT < 41bp 1 0.563388788905201 1 0.558240652084351 experiment 0.873222422189598 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 EMC4 ENSG00000128463 UTR3 Human protein_coding chr15:34522177 chr15:34522179 . . 0 hm6A_associated_SNPs_15929 0 0 1 1 34522169 34522192 mRNA hsa-miR-154 TMEM85 miRanda miRanda
14034 chr15 34522240 34522240 1 + C A rs552491692 34522244 + 34522224 34522264 41 TGTTTCCAGTACAGAGCAAAACAACAACAAAAAAACATAAC TGTTTCCAGTACAGAGAAAAACAACAACAAAAAAACATAAC < 41bp 1 0.434158283911405 1 0.56477290391922 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 EMC4;SLC12A6 ENSG00000128463 UTR3 Human protein_coding chr15:34522244 chr15:34522240 . . 0 hm6A_associated_SNPs_15930 1 0 1 2 34522228 34522246 mRNA hsa-miR-129-5p TMEM85 miRanda miRanda
14034 chr15 34522240 34522240 1 + C A rs552491692 34522244 + 34522224 34522264 41 TGTTTCCAGTACAGAGCAAAACAACAACAAAAAAACATAAC TGTTTCCAGTACAGAGAAAAACAACAACAAAAAAACATAAC < 41bp 1 0.434158283911405 1 0.56477290391922 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 EMC4;SLC12A6 ENSG00000128463 UTR3 Human protein_coding chr15:34522244 chr15:34522240 . . 0 hm6A_associated_SNPs_15930 1 0 1 2 34522237 34522257 mRNA hsa-miR-129-5p TMEM85 miRanda miRanda
14034 chr15 34522240 34522240 1 + C A rs552491692 34522258 + 34522238 34522278 41 AGCAAAACAACAACAAAAAAACATAACTATGTAAACAAGAG AGAAAAACAACAACAAAAAAACATAACTATGTAAACAAGAG < 41bp 1 0.475524950156394 1 0.730870842933655 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 3 EMC4;SLC12A6 ENSG00000128463 UTR3 Human protein_coding chr15:34522258 chr15:34522240 . . 0 hm6A_associated_SNPs_15931 1 0 1 2 34522228 34522246 mRNA hsa-miR-129-5p TMEM85 miRanda miRanda
14034 chr15 34522240 34522240 1 + C A rs552491692 34522258 + 34522238 34522278 41 AGCAAAACAACAACAAAAAAACATAACTATGTAAACAAGAG AGAAAAACAACAACAAAAAAACATAACTATGTAAACAAGAG < 41bp 1 0.475524950156394 1 0.730870842933655 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 3 EMC4;SLC12A6 ENSG00000128463 UTR3 Human protein_coding chr15:34522258 chr15:34522240 . . 0 hm6A_associated_SNPs_15931 1 0 1 2 34522237 34522257 mRNA hsa-miR-129-5p TMEM85 miRanda miRanda
14034 chr15 35272036 35272036 1 - A G rs190648999 35272044 - 35272024 35272064 41 TTATAAAATCTTCAGGAATGACATTCTCTAGCAATAAAAGG TTATAAAATCTTCAGGAATGACATTCTCCAGCAATAAAAGG < 41bp 1 0.436202259196105 1 0.57280707359314 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 29 ZNF770 ENSG00000198146;ENSG00000212768 UTR3 Human other chr15:35272044 chr15:35272036 . . 0 hm6A_associated_SNPs_15934 0 0 1 1 35272028 35272050 mRNA hsa-miR-137 ZNF770 miRanda miRanda
14034 chr15 40684192 40684192 1 + G A rs199907924 40684195 + 40684175 40684215 41 AGCTGAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAG AGCTGAAGCTTTTTAACAAAACAGCCAAAAAGCAGATGGAG < 41bp 1 0.525168565825522 1 0.00811603665351868 experiment 0.949662868348956 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 18 KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40684195 chr15:40684192 nonsynonymous SNV 0.990 2 hm6A_associated_SNPs_15954 0 0 1 1 40684191 40684206 mRNA hsa-miR-129-5p C15orf23 miRanda miRanda
14034 chr15 40765115 40765115 1 + A C rs186655194 40765118 + 40765098 40765138 41 TCTTGCCTGGTAGCTCCAGGACCCAGCTCTGCAGGCACCCA TCTTGCCTGGTAGCTCCCGGACCCAGCTCTGCAGGCACCCA < 41bp 1 0.393120068351542 1 0.0251300930976868 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 CHST14 ENSG00000169105 UTR3 Human protein_coding chr15:40765118 chr15:40765115 . . 0 hm6A_associated_SNPs_15968 0 0 1 1 40765094 40765117 mRNA hsa-miR-422a CHST14 miRanda miRanda
14034 chr15 41248226 41248226 1 + G T rs113689186 41248218 + 41248198 41248238 41 AGGTGGAGGGCCTGCCCTGGACACAGGGGCCCTGCTGAGCA AGGTGGAGGGCCTGCCCTGGACACAGGGTCCCTGCTGAGCA < 41bp 1 0.751232654721788 1 0.897934079170227 experiment 0.497534690556425 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 CHAC1 ENSG00000128965 UTR3 Human protein_coding chr15:41248218 chr15:41248226 . . 0 hm6A_associated_SNPs_15988 0 0 1 1 41248214 41248235 mRNA hsa-miR-214 CHAC1 miRanda miRanda
14034 chr15 41590417 41590417 1 + A G rs576643167 41590430 + 41590410 41590450 41 GGATTCCAGTTATCCTGCTAACATCTCCAGGAAGAAAGAAG GGATTCCGGTTATCCTGCTAACATCTCCAGGAAGAAAGAAG < 41bp 1 0.337336624953824 1 0.253032296895981 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41590430 chr15:41590417 . . 0 hm6A_associated_SNPs_15989 0 0 1 1 41590398 41590421 mRNA hsa-miR-191 LOC729082 miRanda miRanda
14034 chr15 41672624 41672624 1 + C G rs144930202 41672607 + 41672587 41672627 41 GTTTTTACTTAAGTCCATTAACAATTCAGGTTTCTAACGAG GTTTTTACTTAAGTCCATTAACAATTCAGGTTTCTAAGGAG < 41bp 1 0.578725210048812 1 0.00939843058586121 experiment 0.842549579902376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 NUSAP1 ENSG00000137804 UTR3 Human protein_coding chr15:41672607 chr15:41672624 . . 0 hm6A_associated_SNPs_15998 0 0 1 1 41672624 41672643 mRNA hsa-miR-590-3p NUSAP1 miRanda miRanda
14034 chr15 41772982 41772982 1 + T C rs181065103 41772988 + 41772968 41773008 41 TGGGCTGGAGCAGCTGTTGAACTGGGAAGAGACTCTAAACT TGGGCTGGAGCAGCCGTTGAACTGGGAAGAGACTCTAAACT < 41bp 1 0.776851335438617 1 0.978269457817078 experiment 0.446297329122766 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 RTF1 ENSG00000137815 UTR3 Human protein_coding chr15:41772988 chr15:41772982 . . 0 hm6A_associated_SNPs_16001 0 0 1 1 41772966 41772988 mRNA hsa-miR-421 RTF1 miRanda miRanda
14034 chr15 42059588 42059588 1 + A G rs150870891 42059582 + 42059562 42059602 41 TCTTAGAACTTGGATCCTTGACTTCAATGATGCAGTGGATA TCTTAGAACTTGGATCCTTGACTTCAGTGATGCAGTGGATA < 41bp 1 0.74781037166275 1 0.775338530540466 experiment 0.5043792566745 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 MGA ENSG00000174197 UTR3 Human protein_coding chr15:42059582 chr15:42059588 . . 0 hm6A_associated_SNPs_16024 0 0 1 1 42059575 42059598 mRNA hsa-miR-217 MGA miRanda miRanda
14034 chr15 42060323 42060323 1 + C G rs12101865 42060329 + 42060309 42060349 41 ATTATCTCCCCAGACCAGAGACAGTGGCCAAAATAAAAAAT ATTATCTCCCCAGAGCAGAGACAGTGGCCAAAATAAAAAAT < 41bp 1 0.768720749323535 1 0.847270607948303 experiment 0.46255850135293 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 MGA ENSG00000174197 UTR3 Human protein_coding chr15:42060329 chr15:42060323 . . 0 hm6A_associated_SNPs_16025 0 0 0 1 42060315 42060339 mRNA hsa-miR-328 MGA miRanda miRanda
14034 chr15 42118235 42118235 1 + C A rs114877930 42118215 + 42118195 42118235 41 GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACC GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACA < 41bp 1 0.698589001665062 1 0.43411660194397 experiment 0.602821996669875 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MAPKBP1 ENSG00000250379 ncRNA_exonic Human antisense chr15:42118215 chr15:42118235 . . 0 hm6A_associated_SNPs_16027 0 0 1 4 42118223 42118242 mRNA hsa-miR-24 MAPKBP1 miRanda miRanda
14034 chr15 42118235 42118235 1 + C A rs114877930 42118215 + 42118195 42118235 41 GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACC GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACA < 41bp 1 0.698589001665062 1 0.43411660194397 experiment 0.602821996669875 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MAPKBP1 ENSG00000250379 ncRNA_exonic Human antisense chr15:42118215 chr15:42118235 . . 0 hm6A_associated_SNPs_16027 0 0 1 4 42118231 42118252 mRNA hsa-miR-1 MAPKBP1 miRanda miRanda
14034 chr15 42118235 42118235 1 + C A rs114877930 42118215 + 42118195 42118235 41 GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACC GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACA < 41bp 1 0.698589001665062 1 0.43411660194397 experiment 0.602821996669875 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MAPKBP1 ENSG00000250379 ncRNA_exonic Human antisense chr15:42118215 chr15:42118235 . . 0 hm6A_associated_SNPs_16027 0 0 1 4 42118231 42118252 mRNA hsa-miR-206 MAPKBP1 miRanda miRanda
14034 chr15 42118235 42118235 1 + C A rs114877930 42118215 + 42118195 42118235 41 GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACC GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACA < 41bp 1 0.698589001665062 1 0.43411660194397 experiment 0.602821996669875 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MAPKBP1 ENSG00000250379 ncRNA_exonic Human antisense chr15:42118215 chr15:42118235 . . 0 hm6A_associated_SNPs_16027 0 0 1 4 42118233 42118252 mRNA hsa-miR-613 MAPKBP1 miRanda miRanda
14034 chr15 43481408 43481408 1 + G A rs115357955 43481417 + 43481397 43481437 41 GAAACCCAGAAGTTCTGTGAACAAGTCCATGCTGCCATCAA GAAACCCAGAAATTCTGTGAACAAGTCCATGCTGCCATCAA < 41bp 1 0.711129379668043 1 0.00556972622871399 experiment 0.577741240663913 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43481417 chr15:43481408 nonsynonymous SNV . 0 hm6A_associated_SNPs_16047 0 0 1 2 43481403 43481432 mRNA hsa-miR-103 CCNDBP1 miRanda miRanda
14034 chr15 43481408 43481408 1 + G A rs115357955 43481417 + 43481397 43481437 41 GAAACCCAGAAGTTCTGTGAACAAGTCCATGCTGCCATCAA GAAACCCAGAAATTCTGTGAACAAGTCCATGCTGCCATCAA < 41bp 1 0.711129379668043 1 0.00556972622871399 experiment 0.577741240663913 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43481417 chr15:43481408 nonsynonymous SNV . 0 hm6A_associated_SNPs_16047 0 0 1 2 43481403 43481432 mRNA hsa-miR-107 CCNDBP1 miRanda miRanda
14034 chr15 44094013 44094013 1 + T G rs143593239 44093996 + 44093976 44094016 41 TAGAGGCGCTTATTGCCCTAACCAACTGATGCGTGCTTTCT TAGAGGCGCTTATTGCCCTAACCAACTGATGCGTGCTGTCT < 41bp 1 0.574738627701544 1 0.570805788040161 experiment 0.850522744596912 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 38 SERF2-C15ORF63 ENSG00000140264;ENSG00000242028 UTR3 Human other chr15:44093996 chr15:44094013 . . 0 hm6A_associated_SNPs_16057 0 0 1 2 44094012 44094034 mRNA hsa-miR-145 C15orf63 miRanda miRanda
14034 chr15 44094013 44094013 1 + T G rs143593239 44093996 + 44093976 44094016 41 TAGAGGCGCTTATTGCCCTAACCAACTGATGCGTGCTTTCT TAGAGGCGCTTATTGCCCTAACCAACTGATGCGTGCTGTCT < 41bp 1 0.574738627701544 1 0.570805788040161 experiment 0.850522744596912 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 38 SERF2-C15ORF63 ENSG00000140264;ENSG00000242028 UTR3 Human other chr15:44093996 chr15:44094013 . . 0 hm6A_associated_SNPs_16057 0 0 1 2 44093992 44094013 mRNA hsa-miR-497 C15orf63 miRanda miRanda
14034 chr15 44630445 44630445 1 + A G rs202050874 44630436 + 44630416 44630456 41 CTTTTTGTTACTTGGGCAGAACAAATCAAAAGAGGTGGTGA CTTTTTGTTACTTGGGCAGAACAAATCAAGAGAGGTGGTGA < 41bp 1 0.580706376904238 1 0.610898792743683 experiment 0.838587246191523 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 CASC4 ENSG00000166734 CDS Human protein_coding chr15:44630436 chr15:44630445 synonymous SNV . 0 hm6A_associated_SNPs_16061 0 0 1 1 44630436 44630457 mRNA hsa-miR-197 CASC4 miRanda miRanda
14034 chr15 44706827 44706827 1 + T A rs540678621 44706841 + 44706821 44706861 41 TAGTGATCTTATTTGATTAGACTTTTTCAGAAGTACTAAAT TAGTGAACTTATTTGATTAGACTTTTTCAGAAGTACTAAAT < 41bp 1 0.208193332610594 1 0.829256176948547 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 7 CASC4 ENSG00000259595 ncRNA_intronic Human antisense chr15:44706841 chr15:44706827 . . 0 hm6A_associated_SNPs_16063 0 0 1 1 44706810 44706831 mRNA hsa-miR-224 CASC4 miRanda miRanda
14034 chr15 45010095 45010095 1 + C G rs368409484 45010083 + 45010063 45010103 41 AACATCTTGGTCAGATTTGAACTCTTCAATCTCTTGCACTC AACATCTTGGTCAGATTTGAACTCTTCAATCTGTTGCACTC < 41bp 1 0.338201820823195 1 0.159255683422089 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 B2M ENSG00000166710 UTR3 Human protein_coding chr15:45010083 chr15:45010095 . . 0 hm6A_associated_SNPs_16071 0 0 1 5 45010081 45010103 mRNA hsa-miR-130a B2M miRanda miRanda
14034 chr15 45010095 45010095 1 + C G rs368409484 45010083 + 45010063 45010103 41 AACATCTTGGTCAGATTTGAACTCTTCAATCTCTTGCACTC AACATCTTGGTCAGATTTGAACTCTTCAATCTGTTGCACTC < 41bp 1 0.338201820823195 1 0.159255683422089 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 B2M ENSG00000166710 UTR3 Human protein_coding chr15:45010083 chr15:45010095 . . 0 hm6A_associated_SNPs_16071 0 0 1 5 45010082 45010103 mRNA hsa-miR-301a B2M miRanda miRanda
14034 chr15 45010095 45010095 1 + C G rs368409484 45010083 + 45010063 45010103 41 AACATCTTGGTCAGATTTGAACTCTTCAATCTCTTGCACTC AACATCTTGGTCAGATTTGAACTCTTCAATCTGTTGCACTC < 41bp 1 0.338201820823195 1 0.159255683422089 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 B2M ENSG00000166710 UTR3 Human protein_coding chr15:45010083 chr15:45010095 . . 0 hm6A_associated_SNPs_16071 0 0 1 5 45010081 45010103 mRNA hsa-miR-130b B2M miRanda miRanda
14034 chr15 45010095 45010095 1 + C G rs368409484 45010083 + 45010063 45010103 41 AACATCTTGGTCAGATTTGAACTCTTCAATCTCTTGCACTC AACATCTTGGTCAGATTTGAACTCTTCAATCTGTTGCACTC < 41bp 1 0.338201820823195 1 0.159255683422089 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 B2M ENSG00000166710 UTR3 Human protein_coding chr15:45010083 chr15:45010095 . . 0 hm6A_associated_SNPs_16071 0 0 1 5 45010083 45010103 mRNA hsa-miR-454 B2M miRanda miRanda
14034 chr15 45010095 45010095 1 + C G rs368409484 45010083 + 45010063 45010103 41 AACATCTTGGTCAGATTTGAACTCTTCAATCTCTTGCACTC AACATCTTGGTCAGATTTGAACTCTTCAATCTGTTGCACTC < 41bp 1 0.338201820823195 1 0.159255683422089 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 B2M ENSG00000166710 UTR3 Human protein_coding chr15:45010083 chr15:45010095 . . 0 hm6A_associated_SNPs_16071 0 0 1 5 45010082 45010103 mRNA hsa-miR-301b B2M miRanda miRanda
14034 chr15 45366894 45366894 1 + G A rs555108311 45366883 + 45366863 45366903 41 ATGAGGATATAGTAGCCATGACATAGCTTGAGCTATAGCCT ATGAGGATATAGTAGCCATGACATAGCTTGAACTATAGCCT < 41bp 1 0.263654466776068 1 0.369345963001251 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 SORD ENSG00000140263 UTR3 Human protein_coding chr15:45366883 chr15:45366894 . . 0 hm6A_associated_SNPs_16077 0 0 0 1 45366872 45366894 mRNA hsa-miR-26b SORD miRanda miRanda
14034 chr15 45983276 45983276 1 + G A rs11855175 45983290 + 45983270 45983310 41 AAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGAC AAAACTACAGTCACTGAATGACCAAGAGCAGCACGAAGGAC < 41bp 1 0.223123395913216 1 0.892134189605713 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 SQOR ENSG00000137767 UTR3 Human protein_coding chr15:45983290 chr15:45983276 . . 0 hm6A_associated_SNPs_16084 0 0 0 1 45983258 45983284 mRNA hsa-miR-134 SQRDL miRanda miRanda
14034 chr15 48064076 48064076 1 + T C rs150193131 48064060 + 48064040 48064080 41 TGTTGTAAGGGTACCTTAAAACAAGAGACTCGCTTGTATTT TGTTGTAAGGGTACCTTAAAACAAGAGACTCGCTTGCATTT < 41bp 1 0.595536792439484 1 0.972753524780273 experiment 0.808926415121033 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 SEMA6D ENSG00000137872 UTR3 Human protein_coding chr15:48064060 chr15:48064076 . . 0 hm6A_associated_SNPs_16085 0 0 0 2 48064061 48064079 mRNA hsa-miR-381 SEMA6D miRanda miRanda
14034 chr15 48064076 48064076 1 + T C rs150193131 48064060 + 48064040 48064080 41 TGTTGTAAGGGTACCTTAAAACAAGAGACTCGCTTGTATTT TGTTGTAAGGGTACCTTAAAACAAGAGACTCGCTTGCATTT < 41bp 1 0.595536792439484 1 0.972753524780273 experiment 0.808926415121033 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 SEMA6D ENSG00000137872 UTR3 Human protein_coding chr15:48064060 chr15:48064076 . . 0 hm6A_associated_SNPs_16085 0 0 0 2 48064059 48064079 mRNA hsa-miR-300 SEMA6D miRanda miRanda
14034 chr15 49171386 49171386 1 + G T rs560389981 49171383 + 49171363 49171403 41 ATATCTTTTGAGTTATTTGGACTGAAAGCTTAAGAAAACTT ATATCTTTTGAGTTATTTGGACTTAAAGCTTAAGAAAACTT < 41bp 1 0.323488792052664 1 0.946836709976196 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 EID1 ENSG00000255302 UTR3 Human protein_coding chr15:49171383 chr15:49171386 . . 0 hm6A_associated_SNPs_16094 0 0 1 1 49171384 49171407 mRNA hsa-miR-145 EID1 miRanda miRanda
14034 chr15 49171386 49171386 1 + G T rs560389981 49171400 + 49171380 49171420 41 TGGACTGAAAGCTTAAGAAAACTTGGAAAATTCTATTTTGT TGGACTTAAAGCTTAAGAAAACTTGGAAAATTCTATTTTGT < 41bp 1 0.11798202921872 1 0.456453859806061 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 7 EID1 ENSG00000255302 UTR3 Human protein_coding chr15:49171400 chr15:49171386 . . 0 hm6A_associated_SNPs_16095 0 0 1 1 49171384 49171407 mRNA hsa-miR-145 EID1 miRanda miRanda
14034 chr15 49171398 49171398 1 + A C rs16961794 49171383 + 49171363 49171403 41 ATATCTTTTGAGTTATTTGGACTGAAAGCTTAAGAAAACTT ATATCTTTTGAGTTATTTGGACTGAAAGCTTAAGACAACTT < 41bp 1 0.337015389381633 1 0.976286292076111 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 EID1 ENSG00000255302 UTR3 Human protein_coding chr15:49171383 chr15:49171398 . . 0 hm6A_associated_SNPs_16096 0 0 1 1 49171384 49171407 mRNA hsa-miR-145 EID1 miRanda miRanda
14034 chr15 49171398 49171398 1 + A C rs16961794 49171400 + 49171380 49171420 41 TGGACTGAAAGCTTAAGAAAACTTGGAAAATTCTATTTTGT TGGACTGAAAGCTTAAGACAACTTGGAAAATTCTATTTTGT Direct Loss 1 0.148129536432603 1 0.61970978975296 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 EID1 ENSG00000255302 UTR3 Human protein_coding chr15:49171400 chr15:49171398 . . 0 hm6A_associated_SNPs_16097 0 0 1 1 49171384 49171407 mRNA hsa-miR-145 EID1 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528329 50528352 mRNA hsa-miR-93 SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528324 50528351 mRNA hsa-miR-302a SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528324 50528351 mRNA hsa-miR-302b SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528324 50528351 mRNA hsa-miR-302c SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528324 50528351 mRNA hsa-miR-302d SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528327 50528351 mRNA hsa-miR-373 SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528329 50528351 mRNA hsa-miR-520e SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528328 50528351 mRNA hsa-miR-520a-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528329 50528351 mRNA hsa-miR-520b SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528328 50528351 mRNA hsa-miR-520c-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528311 + 50528291 50528331 41 TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGAA TGAATATTCCCAGGAGGATAACTCAACATTTCCAGAAAGGA < 41bp 1 0.397926397464558 1 0.98918616771698 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528311 chr15:50528330 . . 0 hm6A_associated_SNPs_16105 0 0 1 11 50528328 50528351 mRNA hsa-miR-520d-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528329 50528352 mRNA hsa-miR-93 SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528324 50528351 mRNA hsa-miR-302a SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528324 50528351 mRNA hsa-miR-302b SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528324 50528351 mRNA hsa-miR-302c SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528324 50528351 mRNA hsa-miR-302d SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528327 50528351 mRNA hsa-miR-373 SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528329 50528351 mRNA hsa-miR-520e SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528328 50528351 mRNA hsa-miR-520a-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528329 50528351 mRNA hsa-miR-520b SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528328 50528351 mRNA hsa-miR-520c-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528332 + 50528312 50528352 41 CTCAACATTTCCAGAAAGAAACTGAATGGACAGCCACTTGA CTCAACATTTCCAGAAAGGAACTGAATGGACAGCCACTTGA < 41bp 1 0.620551402377527 1 0.987374246120453 experiment 0.758897195244945 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528332 chr15:50528330 . . 0 hm6A_associated_SNPs_16106 0 0 1 11 50528328 50528351 mRNA hsa-miR-520d-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528329 50528352 mRNA hsa-miR-93 SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528324 50528351 mRNA hsa-miR-302a SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528324 50528351 mRNA hsa-miR-302b SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528324 50528351 mRNA hsa-miR-302c SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528324 50528351 mRNA hsa-miR-302d SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528327 50528351 mRNA hsa-miR-373 SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528329 50528351 mRNA hsa-miR-520e SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528328 50528351 mRNA hsa-miR-520a-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528329 50528351 mRNA hsa-miR-520b SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528328 50528351 mRNA hsa-miR-520c-3p SLC27A2 miRanda miRanda
14034 chr15 50528330 50528330 1 + A G rs375748964 50528341 + 50528321 50528361 41 TCCAGAAAGAAACTGAATGGACAGCCACTTGATATAATCCA TCCAGAAAGGAACTGAATGGACAGCCACTTGATATAATCCA < 41bp 1 0.516009084196779 1 0.97187477350235 experiment 0.967981831606442 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528341 chr15:50528330 . . 0 hm6A_associated_SNPs_16107 0 0 1 11 50528328 50528351 mRNA hsa-miR-520d-3p SLC27A2 miRanda miRanda
14034 chr15 50528414 50528414 1 + C A rs1802536 50528425 + 50528405 50528445 41 TTGCATACCCGTAAAGGGAGACTTTTTTAAATAACAGTTGA TTGCATACCAGTAAAGGGAGACTTTTTTAAATAACAGTTGA < 41bp 1 0.0845785432045991 1 0.847499907016754 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528425 chr15:50528414 . . 0 hm6A_associated_SNPs_16108 0 0 1 2 50528405 50528424 mRNA hsa-miR-204 SLC27A2 miRanda miRanda
14034 chr15 50528414 50528414 1 + C A rs1802536 50528425 + 50528405 50528445 41 TTGCATACCCGTAAAGGGAGACTTTTTTAAATAACAGTTGA TTGCATACCAGTAAAGGGAGACTTTTTTAAATAACAGTTGA < 41bp 1 0.0845785432045991 1 0.847499907016754 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528425 chr15:50528414 . . 0 hm6A_associated_SNPs_16108 0 0 1 2 50528403 50528424 mRNA hsa-miR-211 SLC27A2 miRanda miRanda
14034 chr15 50528422 50528422 1 + G A rs75075718 50528425 + 50528405 50528445 41 TTGCATACCCGTAAAGGGAGACTTTTTTAAATAACAGTTGA TTGCATACCCGTAAAGGAAGACTTTTTTAAATAACAGTTGA < 41bp 1 0.0902720537541175 1 0.89690089225769 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528425 chr15:50528422 . . 0 hm6A_associated_SNPs_16109 0 0 1 2 50528405 50528424 mRNA hsa-miR-204 SLC27A2 miRanda miRanda
14034 chr15 50528422 50528422 1 + G A rs75075718 50528425 + 50528405 50528445 41 TTGCATACCCGTAAAGGGAGACTTTTTTAAATAACAGTTGA TTGCATACCCGTAAAGGAAGACTTTTTTAAATAACAGTTGA < 41bp 1 0.0902720537541175 1 0.89690089225769 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 SLC27A2 ENSG00000140284 UTR3 Human protein_coding chr15:50528425 chr15:50528422 . . 0 hm6A_associated_SNPs_16109 0 0 1 2 50528403 50528424 mRNA hsa-miR-211 SLC27A2 miRanda miRanda
14034 chr15 50648339 50648339 1 + T C rs504781 50648358 + 50648338 50648378 41 TTTAGCATCCTACATGTAGGACTTGGGAATATGTGAGACAG TCTAGCATCCTACATGTAGGACTTGGGAATATGTGAGACAG < 41bp 1 0.339255218036301 1 0.888958930969238 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 2 GABPB1-AS1 ENSG00000244879 ncRNA_exonic Human antisense chr15:50648358 chr15:50648339 . . 0 hm6A_associated_SNPs_16113 0 0 1 1 50648319 50648340 mRNA hsa-miR-93 LOC100129387 miRanda miRanda
14034 chr15 51699839 51699839 1 + C T rs377435408 51699852 + 51699832 51699872 41 CGTTAAGCACAGGTGCTATGACAGAAAAAGTTCTGGGGTGG CGTTAAGTACAGGTGCTATGACAGAAAAAGTTCTGGGGTGG < 41bp 1 0.0343996971271574 1 0.0354162156581879 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 8 GLDN ENSG00000186417 UTR3 Human protein_coding chr15:51699852 chr15:51699839 . . 0 hm6A_associated_SNPs_16120 0 0 0 1 51699823 51699843 mRNA hsa-miR-218 GLDN miRanda miRanda
14034 chr15 52357589 52357589 1 + A G rs58936667 52357572 + 52357552 52357592 41 ATAGCTATTTTTTTCCTAAGACATTTTTCATTCATGAATAT ATAGCTATTTTTTTCCTAAGACATTTTTCATTCATGAGTAT < 41bp 1 0.711393031648214 1 0.887537479400635 experiment 0.577213936703572 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 MAPK6 ENSG00000259712 ncRNA_intronic Human antisense chr15:52357572 chr15:52357589 . . 0 hm6A_associated_SNPs_16124 0 0 1 1 52357568 52357589 mRNA hsa-miR-433 MAPK6 miRanda miRanda
14034 chr15 57579914 57579914 1 + T A rs566734871 57579922 + 57579902 57579942 41 ATTTCTGTTAATTTGAAAGAACAAAAACAAGACAGAACTTC ATTTCTGTTAATATGAAAGAACAAAAACAAGACAGAACTTC < 41bp 1 0.625534729464942 1 0.585892915725708 experiment 0.748930541070116 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 TCF12 ENSG00000140262 UTR3 Human protein_coding chr15:57579922 chr15:57579914 . . 0 hm6A_associated_SNPs_16131 0 0 1 1 57579905 57579926 mRNA hsa-miR-375 TCF12 miRanda miRanda
14034 chr15 58001458 58001458 1 + C T rs146810912 58001453 + 58001433 58001473 41 ACGCAAGTACTAAGAACTTGACAGGCCTTTCCAGTGGGACT ACGCAAGTACTAAGAACTTGACAGGTCTTTCCAGTGGGACT < 41bp 1 0.79956936692198 1 0.998464941978455 experiment 0.40086126615604 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 26 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58001453 chr15:58001458 synonymous SNV . 0 hm6A_associated_SNPs_16135 0 0 1 1 58001437 58001459 mRNA hsa-miR-339-5p GRINL1A miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009607 + 58009587 58009627 41 TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTCCCCCAGA TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTGCCCCAGA < 41bp 1 0.146927296580002 1 0.0152417421340942 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009607 chr15:58009620 . . 0 hm6A_associated_SNPs_16138 0 0 1 4 58009608 58009629 mRNA hsa-miR-330-5p GCOM1 miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009607 + 58009587 58009627 41 TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTCCCCCAGA TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTGCCCCAGA < 41bp 1 0.146927296580002 1 0.0152417421340942 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009607 chr15:58009620 . . 0 hm6A_associated_SNPs_16138 0 0 1 4 58009608 58009629 mRNA hsa-miR-330-5p GRINL1A miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009607 + 58009587 58009627 41 TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTCCCCCAGA TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTGCCCCAGA < 41bp 1 0.146927296580002 1 0.0152417421340942 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009607 chr15:58009620 . . 0 hm6A_associated_SNPs_16138 0 0 1 4 58009610 58009629 mRNA hsa-miR-326 GCOM1 miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009607 + 58009587 58009627 41 TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTCCCCCAGA TCTCTGTGTGTCCCCTCTTGACACTCACTGTTTGCCCCAGA < 41bp 1 0.146927296580002 1 0.0152417421340942 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009607 chr15:58009620 . . 0 hm6A_associated_SNPs_16138 0 0 1 4 58009610 58009629 mRNA hsa-miR-326 GRINL1A miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009632 + 58009612 58009652 41 CACTGTTTCCCCCAGAGCTAACTATCCTGACGTATGGTAAT CACTGTTTGCCCCAGAGCTAACTATCCTGACGTATGGTAAT < 41bp 1 0.118210039419022 1 0.0115872919559479 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009632 chr15:58009620 . . 0 hm6A_associated_SNPs_16139 0 0 1 4 58009608 58009629 mRNA hsa-miR-330-5p GCOM1 miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009632 + 58009612 58009652 41 CACTGTTTCCCCCAGAGCTAACTATCCTGACGTATGGTAAT CACTGTTTGCCCCAGAGCTAACTATCCTGACGTATGGTAAT < 41bp 1 0.118210039419022 1 0.0115872919559479 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009632 chr15:58009620 . . 0 hm6A_associated_SNPs_16139 0 0 1 4 58009608 58009629 mRNA hsa-miR-330-5p GRINL1A miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009632 + 58009612 58009652 41 CACTGTTTCCCCCAGAGCTAACTATCCTGACGTATGGTAAT CACTGTTTGCCCCAGAGCTAACTATCCTGACGTATGGTAAT < 41bp 1 0.118210039419022 1 0.0115872919559479 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009632 chr15:58009620 . . 0 hm6A_associated_SNPs_16139 0 0 1 4 58009610 58009629 mRNA hsa-miR-326 GCOM1 miRanda miRanda
14034 chr15 58009620 58009620 1 + C G rs149138710 58009632 + 58009612 58009652 41 CACTGTTTCCCCCAGAGCTAACTATCCTGACGTATGGTAAT CACTGTTTGCCCCAGAGCTAACTATCCTGACGTATGGTAAT < 41bp 1 0.118210039419022 1 0.0115872919559479 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:58009632 chr15:58009620 . . 0 hm6A_associated_SNPs_16139 0 0 1 4 58009610 58009629 mRNA hsa-miR-326 GRINL1A miRanda miRanda
14034 chr15 63336291 63336291 1 + C T rs17850194 63336279 + 63336259 63336299 41 CTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGGC CTCAAGGGCACCGAAGATGAACTGGACAAATATTCTGAGGC < 41bp 1 0.460017886814914 1 0.998935282230377 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 TPM1 ENSG00000140416 CDS Human protein_coding chr15:63336279 chr15:63336291 synonymous SNV . 0 hm6A_associated_SNPs_16166 3 0 1 1 63336276 63336294 mRNA hsa-miR-496 TPM1 miRanda miRanda
14034 chr15 64448104 64448104 1 - G A rs541426098 64448118 - 64448098 64448138 41 GCTGGCATCTGGTGGAGCGGACCCACTCCCCTCACATTCCA GCTGGCATCTGGTGGAGCGGACCCACTCCCCTCATATTCCA < 41bp 1 0.486057820595703 1 0.671359062194824 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 PPIB;SNX22 ENSG00000157734;ENSG00000166794 UTR3 Human other chr15:64448118 chr15:64448104 . . 0 hm6A_associated_SNPs_16174 0 0 1 3 64448098 64448120 mRNA hsa-miR-1 PPIB miRanda miRanda
14034 chr15 64448104 64448104 1 - G A rs541426098 64448118 - 64448098 64448138 41 GCTGGCATCTGGTGGAGCGGACCCACTCCCCTCACATTCCA GCTGGCATCTGGTGGAGCGGACCCACTCCCCTCATATTCCA < 41bp 1 0.486057820595703 1 0.671359062194824 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 PPIB;SNX22 ENSG00000157734;ENSG00000166794 UTR3 Human other chr15:64448118 chr15:64448104 . . 0 hm6A_associated_SNPs_16174 0 0 1 3 64448098 64448120 mRNA hsa-miR-206 PPIB miRanda miRanda
14034 chr15 64448104 64448104 1 - G A rs541426098 64448118 - 64448098 64448138 41 GCTGGCATCTGGTGGAGCGGACCCACTCCCCTCACATTCCA GCTGGCATCTGGTGGAGCGGACCCACTCCCCTCATATTCCA < 41bp 1 0.486057820595703 1 0.671359062194824 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 PPIB;SNX22 ENSG00000157734;ENSG00000166794 UTR3 Human other chr15:64448118 chr15:64448104 . . 0 hm6A_associated_SNPs_16174 0 0 1 3 64448098 64448117 mRNA hsa-miR-613 PPIB miRanda miRanda
14034 chr15 66180480 66180480 1 + T A rs542710640 66180468 + 66180448 66180488 41 AGCCTGTCACTGTATGTAGGACATAATAGAACTTGATCACT AGCCTGTCACTGTATGTAGGACATAATAGAACATGATCACT < 41bp 1 0.706830802341414 1 0.655805766582489 experiment 0.586338395317171 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 RAB11A ENSG00000103769 UTR3 Human protein_coding chr15:66180468 chr15:66180480 . . 0 hm6A_associated_SNPs_16190 0 0 1 3 66180471 66180492 mRNA hsa-miR-26a RAB11A miRanda miRanda
14034 chr15 66180480 66180480 1 + T A rs542710640 66180468 + 66180448 66180488 41 AGCCTGTCACTGTATGTAGGACATAATAGAACTTGATCACT AGCCTGTCACTGTATGTAGGACATAATAGAACATGATCACT < 41bp 1 0.706830802341414 1 0.655805766582489 experiment 0.586338395317171 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 RAB11A ENSG00000103769 UTR3 Human protein_coding chr15:66180468 chr15:66180480 . . 0 hm6A_associated_SNPs_16190 0 0 1 3 66180473 66180492 mRNA hsa-miR-26b RAB11A miRanda miRanda
14034 chr15 66180480 66180480 1 + T A rs542710640 66180468 + 66180448 66180488 41 AGCCTGTCACTGTATGTAGGACATAATAGAACTTGATCACT AGCCTGTCACTGTATGTAGGACATAATAGAACATGATCACT < 41bp 1 0.706830802341414 1 0.655805766582489 experiment 0.586338395317171 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 RAB11A ENSG00000103769 UTR3 Human protein_coding chr15:66180468 chr15:66180480 . . 0 hm6A_associated_SNPs_16190 0 0 1 3 66180476 66180492 mRNA hsa-miR-1297 RAB11A miRanda miRanda
14034 chr15 66180480 66180480 1 + T A rs542710640 66180499 + 66180479 66180519 41 CTTGATCACTTGAAGCTCAGACCTATTGGTCTTGATCAAAT CATGATCACTTGAAGCTCAGACCTATTGGTCTTGATCAAAT < 41bp 1 0.253242749713149 1 0.0444120168685913 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 2 RAB11A ENSG00000103769 UTR3 Human protein_coding chr15:66180499 chr15:66180480 . . 0 hm6A_associated_SNPs_16191 0 0 1 3 66180471 66180492 mRNA hsa-miR-26a RAB11A miRanda miRanda
14034 chr15 66180480 66180480 1 + T A rs542710640 66180499 + 66180479 66180519 41 CTTGATCACTTGAAGCTCAGACCTATTGGTCTTGATCAAAT CATGATCACTTGAAGCTCAGACCTATTGGTCTTGATCAAAT < 41bp 1 0.253242749713149 1 0.0444120168685913 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 2 RAB11A ENSG00000103769 UTR3 Human protein_coding chr15:66180499 chr15:66180480 . . 0 hm6A_associated_SNPs_16191 0 0 1 3 66180473 66180492 mRNA hsa-miR-26b RAB11A miRanda miRanda
14034 chr15 66180480 66180480 1 + T A rs542710640 66180499 + 66180479 66180519 41 CTTGATCACTTGAAGCTCAGACCTATTGGTCTTGATCAAAT CATGATCACTTGAAGCTCAGACCTATTGGTCTTGATCAAAT < 41bp 1 0.253242749713149 1 0.0444120168685913 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 2 RAB11A ENSG00000103769 UTR3 Human protein_coding chr15:66180499 chr15:66180480 . . 0 hm6A_associated_SNPs_16191 0 0 1 3 66180476 66180492 mRNA hsa-miR-1297 RAB11A miRanda miRanda
14034 chr15 67484351 67484351 1 + G C rs542786788 67484335 + 67484315 67484355 41 TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTGGTAC TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTCGTAC < 41bp 1 0.466390711703088 1 0.910316467285156 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67484335 chr15:67484351 . . 0 hm6A_associated_SNPs_16204 0 0 1 5 67484351 67484372 mRNA hsa-miR-15a SMAD3 miRanda miRanda
14034 chr15 67484351 67484351 1 + G C rs542786788 67484335 + 67484315 67484355 41 TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTGGTAC TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTCGTAC < 41bp 1 0.466390711703088 1 0.910316467285156 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67484335 chr15:67484351 . . 0 hm6A_associated_SNPs_16204 0 0 1 5 67484350 67484372 mRNA hsa-miR-16 SMAD3 miRanda miRanda
14034 chr15 67484351 67484351 1 + G C rs542786788 67484335 + 67484315 67484355 41 TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTGGTAC TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTCGTAC < 41bp 1 0.466390711703088 1 0.910316467285156 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67484335 chr15:67484351 . . 0 hm6A_associated_SNPs_16204 0 0 1 5 67484351 67484372 mRNA hsa-miR-15b SMAD3 miRanda miRanda
14034 chr15 67484351 67484351 1 + G C rs542786788 67484335 + 67484315 67484355 41 TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTGGTAC TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTCGTAC < 41bp 1 0.466390711703088 1 0.910316467285156 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67484335 chr15:67484351 . . 0 hm6A_associated_SNPs_16204 0 0 1 5 67484351 67484372 mRNA hsa-miR-195 SMAD3 miRanda miRanda
14034 chr15 67484351 67484351 1 + G C rs542786788 67484335 + 67484315 67484355 41 TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTGGTAC TGCAGAACACAGTAGACAGAACTGCCACCTTCAATTCGTAC < 41bp 1 0.466390711703088 1 0.910316467285156 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67484335 chr15:67484351 . . 0 hm6A_associated_SNPs_16204 0 0 1 5 67484351 67484372 mRNA hsa-miR-424 SMAD3 miRanda miRanda
14034 chr15 67485116 67485116 1 + A G rs117707762 67485135 + 67485115 67485155 41 TATACTTTGGCAGGTTATGAACTTTGAATGTGATGAAATGA TGTACTTTGGCAGGTTATGAACTTTGAATGTGATGAAATGA < 41bp 1 0.346018551382063 1 0.963354647159576 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67485135 chr15:67485116 . . 0 hm6A_associated_SNPs_16207 2 0 0 2 67485095 67485118 mRNA hsa-miR-135a SMAD3 miRanda miRanda
14034 chr15 67485116 67485116 1 + A G rs117707762 67485135 + 67485115 67485155 41 TATACTTTGGCAGGTTATGAACTTTGAATGTGATGAAATGA TGTACTTTGGCAGGTTATGAACTTTGAATGTGATGAAATGA < 41bp 1 0.346018551382063 1 0.963354647159576 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67485135 chr15:67485116 . . 0 hm6A_associated_SNPs_16207 2 0 0 2 67485095 67485118 mRNA hsa-miR-135b SMAD3 miRanda miRanda
14034 chr15 69740335 69740335 1 + C A rs192557685 69740320 + 69740300 69740340 41 CTTTCCCTATGGTTCCAAAGACAACTAGTATTCAACAAACC CTTTCCCTATGGTTCCAAAGACAACTAGTATTCAAAAAACC < 41bp 1 0.659552617500075 1 0.936331510543823 experiment 0.680894764999849 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740320 chr15:69740335 . . 0 hm6A_associated_SNPs_16234 0 0 1 3 69740326 69740347 mRNA hsa-miR-381 KIF23 miRanda miRanda
14034 chr15 69740335 69740335 1 + C A rs192557685 69740320 + 69740300 69740340 41 CTTTCCCTATGGTTCCAAAGACAACTAGTATTCAACAAACC CTTTCCCTATGGTTCCAAAGACAACTAGTATTCAAAAAACC < 41bp 1 0.659552617500075 1 0.936331510543823 experiment 0.680894764999849 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740320 chr15:69740335 . . 0 hm6A_associated_SNPs_16234 0 0 1 3 69740314 69740337 mRNA hsa-miR-653 KIF23 miRanda miRanda
14034 chr15 69740335 69740335 1 + C A rs192557685 69740320 + 69740300 69740340 41 CTTTCCCTATGGTTCCAAAGACAACTAGTATTCAACAAACC CTTTCCCTATGGTTCCAAAGACAACTAGTATTCAAAAAACC < 41bp 1 0.659552617500075 1 0.936331510543823 experiment 0.680894764999849 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740320 chr15:69740335 . . 0 hm6A_associated_SNPs_16234 0 0 1 3 69740326 69740347 mRNA hsa-miR-300 KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740694 69740715 mRNA hsa-miR-17 KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740694 69740715 mRNA hsa-miR-20a KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740690 69740715 mRNA hsa-miR-93 KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740694 69740715 mRNA hsa-miR-106a KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740695 69740715 mRNA hsa-miR-106b KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740694 69740715 mRNA hsa-miR-20b KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740694 69740715 mRNA hsa-miR-519d KIF23 miRanda miRanda
14034 chr15 69740700 69740700 1 + G A rs533785044 69740718 + 69740698 69740738 41 ATGTATATATTCACTTTCTGACATTTAGATATGCCAAAAGA ATATATATATTCACTTTCTGACATTTAGATATGCCAAAAGA < 41bp 1 0.403417813987321 1 0.0152785181999207 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740718 chr15:69740700 . . 0 hm6A_associated_SNPs_16235 0 0 1 8 69740683 69740705 mRNA hsa-miR-374b KIF23 miRanda miRanda
14034 chr15 72433102 72433102 1 + G T rs150325250 72433091 + 72433071 72433111 41 TGGAAGCAGATCAAGGCCTAACTTCATTCAAGACCTAAATA TGGAAGCAGATCAAGGCCTAACTTCATTCAATACCTAAATA < 41bp 1 0.181233429942331 1 0.137182831764221 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 SENP8 ENSG00000260173 ncRNA_intronic Human antisense chr15:72433091 chr15:72433102 . . 0 hm6A_associated_SNPs_16244 0 0 0 1 72433085 72433105 mRNA hsa-miR-431 SENP8 miRanda miRanda
14034 chr15 72433102 72433102 1 + G T rs150325250 72433119 + 72433099 72433139 41 CAAGACCTAAATATTATGAGACTCAGTTATTCGGTTTTATG CAATACCTAAATATTATGAGACTCAGTTATTCGGTTTTATG < 41bp 1 0.279533349581552 1 0.151685565710068 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 4 SENP8 ENSG00000260173 ncRNA_intronic Human antisense chr15:72433119 chr15:72433102 . . 0 hm6A_associated_SNPs_16245 0 0 0 1 72433085 72433105 mRNA hsa-miR-431 SENP8 miRanda miRanda
14034 chr15 72878235 72878235 1 + C G rs530407760 72878218 + 72878198 72878238 41 GCTGGGATAGGCAAGCCATGACAGCTTCCCTGTTTCACCTA GCTGGGATAGGCAAGCCATGACAGCTTCCCTGTTTCAGCTA < 41bp 1 0.35540666277084 1 0.011529952287674 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 ARIH1 ENSG00000166233 UTR3 Human protein_coding chr15:72878218 chr15:72878235 . . 0 hm6A_associated_SNPs_16248 0 0 1 1 72878230 72878250 mRNA hsa-miR-499-5p ARIH1 miRanda miRanda
14034 chr15 74005821 74005821 1 + G A rs551451570 74005817 + 74005797 74005837 41 ATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAA ATAGAATCTTTTCTTCTCAGACAGAGACAGTGCGGCCTCAA < 41bp 1 0.530774974126764 1 0.779270529747009 experiment 0.938450051746471 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 CD276 ENSG00000103855 UTR3 Human protein_coding chr15:74005817 chr15:74005821 . . 0 hm6A_associated_SNPs_16261 0 0 1 2 74005800 74005822 mRNA hsa-miR-370 CD276 miRanda miRanda
14034 chr15 74005821 74005821 1 + G A rs551451570 74005817 + 74005797 74005837 41 ATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAA ATAGAATCTTTTCTTCTCAGACAGAGACAGTGCGGCCTCAA < 41bp 1 0.530774974126764 1 0.779270529747009 experiment 0.938450051746471 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 CD276 ENSG00000103855 UTR3 Human protein_coding chr15:74005817 chr15:74005821 . . 0 hm6A_associated_SNPs_16261 0 0 1 2 74005801 74005823 mRNA hsa-miR-339-5p CD276 miRanda miRanda
14034 chr15 74773487 74773487 1 + G A rs538608452 74773469 + 74773449 74773489 41 GGACCATGATAAAATTCCAGACTCTCGGTAGTTTTTGCGTT GGACCATGATAAAATTCCAGACTCTCGGTAGTTTTTGCATT < 41bp 1 0.19486984086458 1 0.650485277175903 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 UBL7-AS1 ENSG00000247240;ENSG00000260103 ncRNA_exonic Human other chr15:74773469 chr15:74773487 . . 0 hm6A_associated_SNPs_16269 0 0 1 1 74773485 74773508 mRNA hsa-miR-149 LOC440288 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226682 76226704 mRNA hsa-let-7a FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226682 76226704 mRNA hsa-let-7b FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226684 76226704 mRNA hsa-let-7c FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226682 76226704 mRNA hsa-let-7d FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226683 76226704 mRNA hsa-let-7e FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226682 76226704 mRNA hsa-let-7f FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226683 76226704 mRNA hsa-miR-98 FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226693 76226713 mRNA hsa-miR-212 FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226682 76226704 mRNA hsa-let-7g FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226682 76226704 mRNA hsa-let-7i FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226692 + 76226672 76226712 41 AAACACCATAAGTGGCGTGGACTATCTACCTCCAGACTGTT AAACACCATAAGTGGCGTGGACTGTCTACCTCCAGACTGTT < 41bp 1 0.509089371504941 1 0.989942073822021 experiment 0.981821256990117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226692 chr15:76226695 . . 0 hm6A_associated_SNPs_16280 0 0 1 11 76226690 76226713 mRNA hsa-miR-132 FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226682 76226704 mRNA hsa-let-7a FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226682 76226704 mRNA hsa-let-7b FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226684 76226704 mRNA hsa-let-7c FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226682 76226704 mRNA hsa-let-7d FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226683 76226704 mRNA hsa-let-7e FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226682 76226704 mRNA hsa-let-7f FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226683 76226704 mRNA hsa-miR-98 FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226693 76226713 mRNA hsa-miR-212 FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226682 76226704 mRNA hsa-let-7g FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226682 76226704 mRNA hsa-let-7i FBXO22 miRanda miRanda
14034 chr15 76226695 76226695 1 + A G rs116259111 76226707 + 76226687 76226727 41 CGTGGACTATCTACCTCCAGACTGTTTTACAAGAGAGAAAT CGTGGACTGTCTACCTCCAGACTGTTTTACAAGAGAGAAAT < 41bp 1 0.355454177181734 1 0.974241614341736 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76226707 chr15:76226695 . . 0 hm6A_associated_SNPs_16281 0 0 1 11 76226690 76226713 mRNA hsa-miR-132 FBXO22 miRanda miRanda
14034 chr15 77242174 77242174 1 + A G rs79159814 77242191 + 77242171 77242211 41 ATTATGGTGAGTGGAATTTGACATTGTCCAAACCTTTTTCA ATTGTGGTGAGTGGAATTTGACATTGTCCAAACCTTTTTCA < 41bp 1 0.774645093362758 1 0.0131796002388 experiment 0.450709813274484 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 RCN2 ENSG00000117906 UTR3 Human protein_coding chr15:77242191 chr15:77242174 . . 0 hm6A_associated_SNPs_16285 0 0 1 2 77242160 77242181 mRNA hsa-miR-197 RCN2 miRanda miRanda
14034 chr15 77242174 77242174 1 + A G rs79159814 77242191 + 77242171 77242211 41 ATTATGGTGAGTGGAATTTGACATTGTCCAAACCTTTTTCA ATTGTGGTGAGTGGAATTTGACATTGTCCAAACCTTTTTCA < 41bp 1 0.774645093362758 1 0.0131796002388 experiment 0.450709813274484 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 RCN2 ENSG00000117906 UTR3 Human protein_coding chr15:77242191 chr15:77242174 . . 0 hm6A_associated_SNPs_16285 0 0 1 2 77242154 77242175 mRNA hsa-miR-155 RCN2 miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775795 + 77775775 77775815 41 TTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTGC TTATACATCTCCATTTTCTGAACTCTGGACTAACTGGTTGC Direct Loss 1 0.514184390133704 1 0.88501513004303 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775795 chr15:77775796 . . 0 hm6A_associated_SNPs_16286 0 0 1 4 77775773 77775800 mRNA hsa-let-7e HMG20A miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775795 + 77775775 77775815 41 TTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTGC TTATACATCTCCATTTTCTGAACTCTGGACTAACTGGTTGC Direct Loss 1 0.514184390133704 1 0.88501513004303 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775795 chr15:77775796 . . 0 hm6A_associated_SNPs_16286 0 0 1 4 77775773 77775800 mRNA hsa-let-7f HMG20A miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775795 + 77775775 77775815 41 TTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTGC TTATACATCTCCATTTTCTGAACTCTGGACTAACTGGTTGC Direct Loss 1 0.514184390133704 1 0.88501513004303 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775795 chr15:77775796 . . 0 hm6A_associated_SNPs_16286 0 0 1 4 77775778 77775800 mRNA hsa-miR-98 HMG20A miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775795 + 77775775 77775815 41 TTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTGC TTATACATCTCCATTTTCTGAACTCTGGACTAACTGGTTGC Direct Loss 1 0.514184390133704 1 0.88501513004303 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775795 chr15:77775796 . . 0 hm6A_associated_SNPs_16286 0 0 1 4 77775778 77775800 mRNA hsa-let-7i HMG20A miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775807 + 77775787 77775827 41 ATTTTCTGACCTCTGGACTAACTGGTTGCTCAGCAAGGTTC ATTTTCTGAACTCTGGACTAACTGGTTGCTCAGCAAGGTTC < 41bp 1 0.545704054023806 1 0.933111429214478 experiment 0.908591891952388 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775807 chr15:77775796 . . 0 hm6A_associated_SNPs_16287 0 0 1 4 77775773 77775800 mRNA hsa-let-7e HMG20A miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775807 + 77775787 77775827 41 ATTTTCTGACCTCTGGACTAACTGGTTGCTCAGCAAGGTTC ATTTTCTGAACTCTGGACTAACTGGTTGCTCAGCAAGGTTC < 41bp 1 0.545704054023806 1 0.933111429214478 experiment 0.908591891952388 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775807 chr15:77775796 . . 0 hm6A_associated_SNPs_16287 0 0 1 4 77775773 77775800 mRNA hsa-let-7f HMG20A miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775807 + 77775787 77775827 41 ATTTTCTGACCTCTGGACTAACTGGTTGCTCAGCAAGGTTC ATTTTCTGAACTCTGGACTAACTGGTTGCTCAGCAAGGTTC < 41bp 1 0.545704054023806 1 0.933111429214478 experiment 0.908591891952388 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775807 chr15:77775796 . . 0 hm6A_associated_SNPs_16287 0 0 1 4 77775778 77775800 mRNA hsa-miR-98 HMG20A miRanda miRanda
14034 chr15 77775796 77775796 1 + C A rs575856726 77775807 + 77775787 77775827 41 ATTTTCTGACCTCTGGACTAACTGGTTGCTCAGCAAGGTTC ATTTTCTGAACTCTGGACTAACTGGTTGCTCAGCAAGGTTC < 41bp 1 0.545704054023806 1 0.933111429214478 experiment 0.908591891952388 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77775807 chr15:77775796 . . 0 hm6A_associated_SNPs_16287 0 0 1 4 77775778 77775800 mRNA hsa-let-7i HMG20A miRanda miRanda
14034 chr15 77776673 77776673 1 + G A rs11631927 77776691 + 77776671 77776711 41 TTGTTTTTGTTTTTGTTTTGACACTGCAGAGCACAAGGCTA TTATTTTTGTTTTTGTTTTGACACTGCAGAGCACAAGGCTA < 41bp 1 0.494029760641295 1 0.00350353121757507 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 3 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77776691 chr15:77776673 . . 0 hm6A_associated_SNPs_16289 0 0 1 2 77776671 77776695 mRNA hsa-miR-19a HMG20A miRanda miRanda
14034 chr15 77776673 77776673 1 + G A rs11631927 77776691 + 77776671 77776711 41 TTGTTTTTGTTTTTGTTTTGACACTGCAGAGCACAAGGCTA TTATTTTTGTTTTTGTTTTGACACTGCAGAGCACAAGGCTA < 41bp 1 0.494029760641295 1 0.00350353121757507 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 3 HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77776691 chr15:77776673 . . 0 hm6A_associated_SNPs_16289 0 0 1 2 77776671 77776695 mRNA hsa-miR-19b HMG20A miRanda miRanda
14034 chr15 78462622 78462622 1 + A C rs530295920 78462624 + 78462604 78462644 41 CTCTGTCCCCACAACCAAAGACAACTCATGGCCTCCTTTGG CTCTGTCCCCACAACCAACGACAACTCATGGCCTCCTTTGG Direct Loss 1 0.401353678012442 1 0.808242678642273 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 IDH3A ENSG00000103740;ENSG00000166411 UTR3 Human other chr15:78462624 chr15:78462622 . . 0 hm6A_associated_SNPs_16295 0 0 1 1 78462602 78462624 mRNA hsa-miR-9 IDH3A miRanda miRanda
14034 chr15 78572845 78572845 1 + G A rs187860413 78572832 + 78572812 78572852 41 GGGCAGCGTGGCCCCACCGGACTAGCACATGATGAATGTAA GGGCAGCGTGGCCCCACCGGACTAGCACATGATAAATGTAA < 41bp 1 0.760099965165225 1 0.897526264190674 experiment 0.47980006966955 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 DNAJA4 ENSG00000140403 UTR3 Human protein_coding chr15:78572832 chr15:78572845 . . 0 hm6A_associated_SNPs_16296 0 0 0 4 78572823 78572851 mRNA hsa-miR-181a DNAJA4 miRanda miRanda
14034 chr15 78572845 78572845 1 + G A rs187860413 78572832 + 78572812 78572852 41 GGGCAGCGTGGCCCCACCGGACTAGCACATGATGAATGTAA GGGCAGCGTGGCCCCACCGGACTAGCACATGATAAATGTAA < 41bp 1 0.760099965165225 1 0.897526264190674 experiment 0.47980006966955 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 DNAJA4 ENSG00000140403 UTR3 Human protein_coding chr15:78572832 chr15:78572845 . . 0 hm6A_associated_SNPs_16296 0 0 0 4 78572823 78572851 mRNA hsa-miR-181b DNAJA4 miRanda miRanda
14034 chr15 78572845 78572845 1 + G A rs187860413 78572832 + 78572812 78572852 41 GGGCAGCGTGGCCCCACCGGACTAGCACATGATGAATGTAA GGGCAGCGTGGCCCCACCGGACTAGCACATGATAAATGTAA < 41bp 1 0.760099965165225 1 0.897526264190674 experiment 0.47980006966955 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 DNAJA4 ENSG00000140403 UTR3 Human protein_coding chr15:78572832 chr15:78572845 . . 0 hm6A_associated_SNPs_16296 0 0 0 4 78572830 78572851 mRNA hsa-miR-181c DNAJA4 miRanda miRanda
14034 chr15 78572845 78572845 1 + G A rs187860413 78572832 + 78572812 78572852 41 GGGCAGCGTGGCCCCACCGGACTAGCACATGATGAATGTAA GGGCAGCGTGGCCCCACCGGACTAGCACATGATAAATGTAA < 41bp 1 0.760099965165225 1 0.897526264190674 experiment 0.47980006966955 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 DNAJA4 ENSG00000140403 UTR3 Human protein_coding chr15:78572832 chr15:78572845 . . 0 hm6A_associated_SNPs_16296 0 0 0 4 78572828 78572851 mRNA hsa-miR-181d DNAJA4 miRanda miRanda
14034 chr15 78574016 78574016 1 + C T rs551065174 78574030 + 78574010 78574050 41 TTTTCCCCAAGTCACAAAAAACTTGTAAGCTGCTGGGTTAA TTTTCCTCAAGTCACAAAAAACTTGTAAGCTGCTGGGTTAA < 41bp 1 0.0911636010588439 1 0.10351774096489 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 DNAJA4 ENSG00000272418 ncRNA_intronic Human sense_intronic chr15:78574030 chr15:78574016 . . 0 hm6A_associated_SNPs_16297 0 0 0 1 78574006 78574027 mRNA hsa-miR-758 DNAJA4 miRanda miRanda
14034 chr15 78574027 78574027 1 + A G rs566469652 78574030 + 78574010 78574050 41 TTTTCCCCAAGTCACAAAAAACTTGTAAGCTGCTGGGTTAA TTTTCCCCAAGTCACAAGAAACTTGTAAGCTGCTGGGTTAA < 41bp 1 0.0833444179004978 1 0.0964242219924927 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 DNAJA4 ENSG00000272418 ncRNA_intronic Human sense_intronic chr15:78574030 chr15:78574027 . . 0 hm6A_associated_SNPs_16298 0 0 0 1 78574006 78574027 mRNA hsa-miR-758 DNAJA4 miRanda miRanda
14034 chr15 78793374 78793374 1 + G A rs190311007 78793358 + 78793338 78793378 41 GGATGAGAAGAAATTATTTGACATTTTTCTGTGGTTGAATA GGATGAGAAGAAATTATTTGACATTTTTCTGTGGTTAAATA < 41bp 1 0.392342529420756 1 0.0173970758914948 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78793358 chr15:78793374 . . 0 hm6A_associated_SNPs_16306 0 0 1 2 78793368 78793390 mRNA hsa-miR-18a IREB2 miRanda miRanda
14034 chr15 78793374 78793374 1 + G A rs190311007 78793358 + 78793338 78793378 41 GGATGAGAAGAAATTATTTGACATTTTTCTGTGGTTGAATA GGATGAGAAGAAATTATTTGACATTTTTCTGTGGTTAAATA < 41bp 1 0.392342529420756 1 0.0173970758914948 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78793358 chr15:78793374 . . 0 hm6A_associated_SNPs_16306 0 0 1 2 78793368 78793390 mRNA hsa-miR-18b IREB2 miRanda miRanda
14034 chr15 78793374 78793374 1 + G A rs190311007 78793383 + 78793363 78793403 41 TTTCTGTGGTTGAATAGAAGACACCTTTCTTTTGTCTTTAG TTTCTGTGGTTAAATAGAAGACACCTTTCTTTTGTCTTTAG < 41bp 1 0.305879922012067 1 0.00646808743476868 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78793383 chr15:78793374 . . 0 hm6A_associated_SNPs_16307 0 0 1 2 78793368 78793390 mRNA hsa-miR-18a IREB2 miRanda miRanda
14034 chr15 78793374 78793374 1 + G A rs190311007 78793383 + 78793363 78793403 41 TTTCTGTGGTTGAATAGAAGACACCTTTCTTTTGTCTTTAG TTTCTGTGGTTAAATAGAAGACACCTTTCTTTTGTCTTTAG < 41bp 1 0.305879922012067 1 0.00646808743476868 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78793383 chr15:78793374 . . 0 hm6A_associated_SNPs_16307 0 0 1 2 78793368 78793390 mRNA hsa-miR-18b IREB2 miRanda miRanda
14034 chr15 79615168 79615168 1 + C G rs74326713 79615151 + 79615131 79615171 41 GAGGTAGAAAACTGTGGGAAACTGTGGCTAATAAAAACTAA GAGGTAGAAAACTGTGGGAAACTGTGGCTAATAAAAAGTAA < 41bp 1 0.241887633786367 1 0.0777417421340942 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615151 chr15:79615168 . . 0 hm6A_associated_SNPs_16319 0 0 1 3 79615164 79615185 mRNA hsa-miR-28-5p TMED3 miRanda miRanda
14034 chr15 79615168 79615168 1 + C G rs74326713 79615151 + 79615131 79615171 41 GAGGTAGAAAACTGTGGGAAACTGTGGCTAATAAAAACTAA GAGGTAGAAAACTGTGGGAAACTGTGGCTAATAAAAAGTAA < 41bp 1 0.241887633786367 1 0.0777417421340942 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615151 chr15:79615168 . . 0 hm6A_associated_SNPs_16319 0 0 1 3 79615157 79615179 mRNA hsa-miR-342-3p TMED3 miRanda miRanda
14034 chr15 79615168 79615168 1 + C G rs74326713 79615151 + 79615131 79615171 41 GAGGTAGAAAACTGTGGGAAACTGTGGCTAATAAAAACTAA GAGGTAGAAAACTGTGGGAAACTGTGGCTAATAAAAAGTAA < 41bp 1 0.241887633786367 1 0.0777417421340942 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615151 chr15:79615168 . . 0 hm6A_associated_SNPs_16319 0 0 1 3 79615163 79615185 mRNA hsa-miR-708 TMED3 miRanda miRanda
14034 chr15 79615168 79615168 1 + C G rs74326713 79615167 + 79615147 79615187 41 GGAAACTGTGGCTAATAAAAACTAAGTGTGAGCGTCCTGGA GGAAACTGTGGCTAATAAAAAGTAAGTGTGAGCGTCCTGGA Direct Loss 1 0.374797922062104 1 0.0109692513942719 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615167 chr15:79615168 . . 0 hm6A_associated_SNPs_16320 0 0 1 3 79615164 79615185 mRNA hsa-miR-28-5p TMED3 miRanda miRanda
14034 chr15 79615168 79615168 1 + C G rs74326713 79615167 + 79615147 79615187 41 GGAAACTGTGGCTAATAAAAACTAAGTGTGAGCGTCCTGGA GGAAACTGTGGCTAATAAAAAGTAAGTGTGAGCGTCCTGGA Direct Loss 1 0.374797922062104 1 0.0109692513942719 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615167 chr15:79615168 . . 0 hm6A_associated_SNPs_16320 0 0 1 3 79615157 79615179 mRNA hsa-miR-342-3p TMED3 miRanda miRanda
14034 chr15 79615168 79615168 1 + C G rs74326713 79615167 + 79615147 79615187 41 GGAAACTGTGGCTAATAAAAACTAAGTGTGAGCGTCCTGGA GGAAACTGTGGCTAATAAAAAGTAAGTGTGAGCGTCCTGGA Direct Loss 1 0.374797922062104 1 0.0109692513942719 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615167 chr15:79615168 . . 0 hm6A_associated_SNPs_16320 0 0 1 3 79615163 79615185 mRNA hsa-miR-708 TMED3 miRanda miRanda
14034 chr15 79615180 79615180 1 + G A rs139872152 79615167 + 79615147 79615187 41 GGAAACTGTGGCTAATAAAAACTAAGTGTGAGCGTCCTGGA GGAAACTGTGGCTAATAAAAACTAAGTGTGAGCATCCTGGA < 41bp 1 0.390556034356424 1 0.0475336313247681 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615167 chr15:79615180 . . 0 hm6A_associated_SNPs_16321 0 0 1 2 79615164 79615185 mRNA hsa-miR-28-5p TMED3 miRanda miRanda
14034 chr15 79615180 79615180 1 + G A rs139872152 79615167 + 79615147 79615187 41 GGAAACTGTGGCTAATAAAAACTAAGTGTGAGCGTCCTGGA GGAAACTGTGGCTAATAAAAACTAAGTGTGAGCATCCTGGA < 41bp 1 0.390556034356424 1 0.0475336313247681 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615167 chr15:79615180 . . 0 hm6A_associated_SNPs_16321 0 0 1 2 79615163 79615185 mRNA hsa-miR-708 TMED3 miRanda miRanda
14034 chr15 80430236 80430236 1 + C T rs556016603 80430231 + 80430211 80430251 41 GAGTGCAGAGGGCTTTTATAACAAACGTGCAGAAATTTTGG GAGTGCAGAGGGCTTTTATAACAAATGTGCAGAAATTTTGG < 41bp 1 0.727660658654339 1 0.338587582111359 experiment 0.544678682691323 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 26 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430231 chr15:80430236 . . 0 hm6A_associated_SNPs_16325 0 0 1 1 80430224 80430245 mRNA hsa-miR-544 ZFAND6 miRanda miRanda
14034 chr15 80430293 80430293 1 + C T rs538424126 80430277 + 80430257 80430297 41 TGTGATTTTTCCAGTATTAAACATGCATGCATTAATCTTGC TGTGATTTTTCCAGTATTAAACATGCATGCATTAATTTTGC < 41bp 1 0.701504547531874 1 0.289259850978851 experiment 0.596990904936251 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430277 chr15:80430293 . . 0 hm6A_associated_SNPs_16326 0 0 1 7 80430279 80430303 mRNA hsa-miR-20a ZFAND6 miRanda miRanda
14034 chr15 80430293 80430293 1 + C T rs538424126 80430277 + 80430257 80430297 41 TGTGATTTTTCCAGTATTAAACATGCATGCATTAATCTTGC TGTGATTTTTCCAGTATTAAACATGCATGCATTAATTTTGC < 41bp 1 0.701504547531874 1 0.289259850978851 experiment 0.596990904936251 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430277 chr15:80430293 . . 0 hm6A_associated_SNPs_16326 0 0 1 7 80430279 80430299 mRNA hsa-miR-31 ZFAND6 miRanda miRanda
14034 chr15 80430293 80430293 1 + C T rs538424126 80430277 + 80430257 80430297 41 TGTGATTTTTCCAGTATTAAACATGCATGCATTAATCTTGC TGTGATTTTTCCAGTATTAAACATGCATGCATTAATTTTGC < 41bp 1 0.701504547531874 1 0.289259850978851 experiment 0.596990904936251 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430277 chr15:80430293 . . 0 hm6A_associated_SNPs_16326 0 0 1 7 80430279 80430303 mRNA hsa-miR-93 ZFAND6 miRanda miRanda
14034 chr15 80430293 80430293 1 + C T rs538424126 80430277 + 80430257 80430297 41 TGTGATTTTTCCAGTATTAAACATGCATGCATTAATCTTGC TGTGATTTTTCCAGTATTAAACATGCATGCATTAATTTTGC < 41bp 1 0.701504547531874 1 0.289259850978851 experiment 0.596990904936251 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430277 chr15:80430293 . . 0 hm6A_associated_SNPs_16326 0 0 1 7 80430279 80430301 mRNA hsa-miR-217 ZFAND6 miRanda miRanda
14034 chr15 80430293 80430293 1 + C T rs538424126 80430277 + 80430257 80430297 41 TGTGATTTTTCCAGTATTAAACATGCATGCATTAATCTTGC TGTGATTTTTCCAGTATTAAACATGCATGCATTAATTTTGC < 41bp 1 0.701504547531874 1 0.289259850978851 experiment 0.596990904936251 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430277 chr15:80430293 . . 0 hm6A_associated_SNPs_16326 0 0 1 7 80430281 80430303 mRNA hsa-miR-106b ZFAND6 miRanda miRanda
14034 chr15 80430293 80430293 1 + C T rs538424126 80430277 + 80430257 80430297 41 TGTGATTTTTCCAGTATTAAACATGCATGCATTAATCTTGC TGTGATTTTTCCAGTATTAAACATGCATGCATTAATTTTGC < 41bp 1 0.701504547531874 1 0.289259850978851 experiment 0.596990904936251 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430277 chr15:80430293 . . 0 hm6A_associated_SNPs_16326 0 0 1 7 80430279 80430303 mRNA hsa-miR-20b ZFAND6 miRanda miRanda
14034 chr15 80430293 80430293 1 + C T rs538424126 80430277 + 80430257 80430297 41 TGTGATTTTTCCAGTATTAAACATGCATGCATTAATCTTGC TGTGATTTTTCCAGTATTAAACATGCATGCATTAATTTTGC < 41bp 1 0.701504547531874 1 0.289259850978851 experiment 0.596990904936251 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430277 chr15:80430293 . . 0 hm6A_associated_SNPs_16326 0 0 1 7 80430290 80430311 mRNA hsa-miR-539 ZFAND6 miRanda miRanda
14034 chr15 80478589 80478589 1 + A C rs1049181 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCCCCCCT < 41bp 1 0.586637365375084 1 0.24913826584816 experiment 0.826725269249833 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478589 . . 0 hm6A_associated_SNPs_16329 1 0 1 2 80478582 80478604 mRNA hsa-miR-296-3p FAH miRanda miRanda
14034 chr15 80478589 80478589 1 + A C rs1049181 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCCCCCCT < 41bp 1 0.586637365375084 1 0.24913826584816 experiment 0.826725269249833 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478589 . . 0 hm6A_associated_SNPs_16329 1 0 1 2 80478581 80478599 mRNA hsa-miR-488 FAH miRanda miRanda
14034 chr15 80478590 80478590 1 + C A rs377100715 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCAACCCT < 41bp 1 0.611212002503047 1 0.395159155130386 experiment 0.777575994993906 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478590 . . 0 hm6A_associated_SNPs_16330 0 0 1 2 80478582 80478604 mRNA hsa-miR-296-3p FAH miRanda miRanda
14034 chr15 80478590 80478590 1 + C A rs377100715 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCAACCCT < 41bp 1 0.611212002503047 1 0.395159155130386 experiment 0.777575994993906 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478590 . . 0 hm6A_associated_SNPs_16330 0 0 1 2 80478581 80478599 mRNA hsa-miR-488 FAH miRanda miRanda
14034 chr15 80478591 80478591 1 + C T rs3210172 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACTCCT < 41bp 1 0.583794729277766 1 0.29860919713974 experiment 0.832410541444467 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478591 . . 0 hm6A_associated_SNPs_16331 1 0 1 2 80478582 80478604 mRNA hsa-miR-296-3p FAH miRanda miRanda
14034 chr15 80478591 80478591 1 + C T rs3210172 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACTCCT < 41bp 1 0.583794729277766 1 0.29860919713974 experiment 0.832410541444467 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478591 . . 0 hm6A_associated_SNPs_16331 1 0 1 2 80478581 80478599 mRNA hsa-miR-488 FAH miRanda miRanda
14034 chr15 80478592 80478592 1 + C T rs370537299 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCTCT < 41bp 1 0.592555341834233 1 0.368295073509216 experiment 0.814889316331534 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478592 . . 0 hm6A_associated_SNPs_16332 0 0 1 2 80478582 80478604 mRNA hsa-miR-296-3p FAH miRanda miRanda
14034 chr15 80478592 80478592 1 + C T rs370537299 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCTCT < 41bp 1 0.592555341834233 1 0.368295073509216 experiment 0.814889316331534 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478592 . . 0 hm6A_associated_SNPs_16332 0 0 1 2 80478581 80478599 mRNA hsa-miR-488 FAH miRanda miRanda
14034 chr15 80478593 80478593 1 + C G rs374309326 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCGT < 41bp 1 0.592654277848804 1 0.292487680912018 experiment 0.814691444302393 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478593 . . 0 hm6A_associated_SNPs_16333 0 0 1 2 80478582 80478604 mRNA hsa-miR-296-3p FAH miRanda miRanda
14034 chr15 80478593 80478593 1 + C G rs374309326 80478574 + 80478554 80478594 41 TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCCT TTTTCTCTGCTCTTCTGGAAACAAAGGGCTCAAGCACCCGT < 41bp 1 0.592654277848804 1 0.292487680912018 experiment 0.814691444302393 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478574 chr15:80478593 . . 0 hm6A_associated_SNPs_16333 0 0 1 2 80478581 80478599 mRNA hsa-miR-488 FAH miRanda miRanda
14034 chr15 80478645 80478645 1 + T C rs1049194 80478652 + 80478632 80478672 41 GCCTGGTCCGCCATTCAGTGACAAATAAAGCCATTGTGCTC GCCTGGTCCGCCACTCAGTGACAAATAAAGCCATTGTGCTC < 41bp 1 0.565711461601218 1 0.492575645446777 experiment 0.868577076797563 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 14 FAH ENSG00000103876 UTR3 Human protein_coding chr15:80478652 chr15:80478645 . . 0 hm6A_associated_SNPs_16335 1 0 1 1 80478640 80478666 mRNA hsa-miR-135a FAH miRanda miRanda
14034 chr15 80890189 80890189 1 + G C rs9801 80890186 + 80890166 80890206 41 TTGAATGTTCTCTATGACTAACAGTTATTAAGTCGGTTGTG TTGAATGTTCTCTATGACTAACACTTATTAAGTCGGTTGTG < 41bp 1 0.151783294904897 1 0.00802600383758545 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 24 ARNT2 ENSG00000172379 UTR3 Human protein_coding chr15:80890186 chr15:80890189 . . 0 hm6A_associated_SNPs_16339 0 0 1 2 80890186 80890208 mRNA hsa-miR-362-3p ARNT2 miRanda miRanda
14034 chr15 80890189 80890189 1 + G C rs9801 80890186 + 80890166 80890206 41 TTGAATGTTCTCTATGACTAACAGTTATTAAGTCGGTTGTG TTGAATGTTCTCTATGACTAACACTTATTAAGTCGGTTGTG < 41bp 1 0.151783294904897 1 0.00802600383758545 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 24 ARNT2 ENSG00000172379 UTR3 Human protein_coding chr15:80890186 chr15:80890189 . . 0 hm6A_associated_SNPs_16339 0 0 1 2 80890174 80890195 mRNA hsa-miR-429 ARNT2 miRanda miRanda
14034 chr15 81047404 81047404 1 + T C rs1046417 81047386 + 81047366 81047406 41 TTGATTGTCTGGTTGGTTTAACAAAGAGCCTAGCTGACTTT TTGATTGTCTGGTTGGTTTAACAAAGAGCCTAGCTGACCTT < 41bp 1 0.418480981963744 1 0.462461620569229 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 ABHD17C ENSG00000136379 UTR3 Human protein_coding chr15:81047386 chr15:81047404 . . 0 hm6A_associated_SNPs_16343 0 0 1 1 81047387 81047406 mRNA hsa-miR-224 FAM108C1 miRanda miRanda
14034 chr15 85348087 85348087 1 + A T rs115357933 85348074 + 85348054 85348094 41 TGTGCCTAGCATCTTACTGAACACTTTCTGGTGATTCTCTC TGTGCCTAGCATCTTACTGAACACTTTCTGGTGTTTCTCTC < 41bp 1 0.114791751707916 1 0.0174049139022827 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 ZNF592 ENSG00000166716 UTR3 Human protein_coding chr15:85348074 chr15:85348087 . . 0 hm6A_associated_SNPs_16356 0 0 1 1 85348074 85348096 mRNA hsa-miR-185 ZNF592 miRanda miRanda
14034 chr15 85681800 85681800 1 + T C rs576545278 85681795 + 85681775 85681815 41 ATGCATTACTTGGTATACAGACTTATTTTCATAATGCAAAT ATGCATTACTTGGTATACAGACTTACTTTCATAATGCAAAT < 41bp 1 0.61009971535017 1 0.924791097640991 experiment 0.77980056929966 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PDE8A ENSG00000073417 UTR3 Human protein_coding chr15:85681795 chr15:85681800 . . 0 hm6A_associated_SNPs_16363 0 0 1 3 85681793 85681813 mRNA hsa-miR-33a PDE8A miRanda miRanda
14034 chr15 85681800 85681800 1 + T C rs576545278 85681795 + 85681775 85681815 41 ATGCATTACTTGGTATACAGACTTATTTTCATAATGCAAAT ATGCATTACTTGGTATACAGACTTACTTTCATAATGCAAAT < 41bp 1 0.61009971535017 1 0.924791097640991 experiment 0.77980056929966 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PDE8A ENSG00000073417 UTR3 Human protein_coding chr15:85681795 chr15:85681800 . . 0 hm6A_associated_SNPs_16363 0 0 1 3 85681790 85681813 mRNA hsa-miR-448 PDE8A miRanda miRanda
14034 chr15 85681800 85681800 1 + T C rs576545278 85681795 + 85681775 85681815 41 ATGCATTACTTGGTATACAGACTTATTTTCATAATGCAAAT ATGCATTACTTGGTATACAGACTTACTTTCATAATGCAAAT < 41bp 1 0.61009971535017 1 0.924791097640991 experiment 0.77980056929966 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 PDE8A ENSG00000073417 UTR3 Human protein_coding chr15:85681795 chr15:85681800 . . 0 hm6A_associated_SNPs_16363 0 0 1 3 85681795 85681813 mRNA hsa-miR-33b PDE8A miRanda miRanda
14034 chr15 85682026 85682026 1 + C G rs148460919 85682011 + 85681991 85682031 41 ACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGCAAA ACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTGGCAAA < 41bp 1 0.180832700639571 1 0.796058773994446 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 PDE8A ENSG00000073417 UTR3 Human protein_coding chr15:85682011 chr15:85682026 . . 0 hm6A_associated_SNPs_16364 0 0 0 1 85682011 85682032 mRNA hsa-miR-450a PDE8A miRanda miRanda
14034 chr15 85682026 85682026 1 + C G rs148460919 85682043 + 85682023 85682063 41 GTTCGCAAAGAAAAGTTAGGACTTAACACTTTTTTCTAAAA GTTGGCAAAGAAAAGTTAGGACTTAACACTTTTTTCTAAAA < 41bp 1 0.32295104482774 1 0.52964586019516 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 4 PDE8A ENSG00000073417 UTR3 Human protein_coding chr15:85682043 chr15:85682026 . . 0 hm6A_associated_SNPs_16365 0 0 0 1 85682011 85682032 mRNA hsa-miR-450a PDE8A miRanda miRanda
14034 chr15 86292324 86292324 1 + G C rs8110 86292339 + 86292319 86292359 41 TGTTTGCAAATGCTCTATGGACATTTGTGTGCTAAATCCTA TGTTTCCAAATGCTCTATGGACATTTGTGTGCTAAATCCTA < 41bp 1 0.722810380092178 1 0.913039028644562 experiment 0.554379239815644 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 AKAP13 ENSG00000259407 ncRNA_exonic Human antisense chr15:86292339 chr15:86292324 . . 0 hm6A_associated_SNPs_16382 0 0 1 1 86292315 86292338 mRNA hsa-miR-335 AKAP13 miRanda miRanda
14034 chr15 89011777 89011777 1 + A G rs140884250 89011789 + 89011769 89011809 41 AAGAATCTACTATGAGTGAGACACCATGCTAGGTGCCGTGA AAGAATCTGCTATGAGTGAGACACCATGCTAGGTGCCGTGA < 41bp 1 0.265547323990753 1 0.0685872137546539 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 MRPS11 ENSG00000173867 ncRNA_intronic Human processed_transcript chr15:89011789 chr15:89011777 . . 0 hm6A_associated_SNPs_16385 0 0 1 1 89011762 89011784 mRNA hsa-miR-26b MRPS11 miRanda miRanda
14034 chr15 89174559 89174559 1 + C G rs115947402 89174572 + 89174552 89174592 41 GATGCCCCCTCAGCTCTTTGACAATCACTGTGGCTGTTGGG GATGCCCGCTCAGCTCTTTGACAATCACTGTGGCTGTTGGG < 41bp 1 0.559259123781355 1 0.00567030906677246 experiment 0.881481752437289 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 AEN ENSG00000181026 UTR3 Human protein_coding chr15:89174572 chr15:89174559 . . 0 hm6A_associated_SNPs_16397 0 0 1 1 89174558 89174578 mRNA hsa-miR-219-5p AEN miRanda miRanda
14034 chr15 89821950 89821950 1 + G A rs34405660 89821935 + 89821915 89821955 41 TAGATCCATGAGATGATCAGACAAGAAATTTTGGAGCAGGT TAGATCCATGAGATGATCAGACAAGAAATTTTGGAACAGGT < 41bp 1 0.746291683738026 1 0.0899119675159454 experiment 0.507416632523949 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 FANCI ENSG00000140525 CDS Human protein_coding chr15:89821935 chr15:89821950 synonymous SNV . 0 hm6A_associated_SNPs_16412 2 0 1 2 89821949 89821968 mRNA hsa-miR-10a FANCI miRanda miRanda
14034 chr15 89821950 89821950 1 + G A rs34405660 89821935 + 89821915 89821955 41 TAGATCCATGAGATGATCAGACAAGAAATTTTGGAGCAGGT TAGATCCATGAGATGATCAGACAAGAAATTTTGGAACAGGT < 41bp 1 0.746291683738026 1 0.0899119675159454 experiment 0.507416632523949 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 FANCI ENSG00000140525 CDS Human protein_coding chr15:89821935 chr15:89821950 synonymous SNV . 0 hm6A_associated_SNPs_16412 2 0 1 2 89821944 89821968 mRNA hsa-miR-10b FANCI miRanda miRanda
14034 chr15 89860349 89860349 1 + T C rs1860021 89860358 + 89860338 89860378 41 ATAGAATAAATTATCTTTAAACATTTCTTCTGTGGTTGAAG ATAGAATAAATCATCTTTAAACATTTCTTCTGTGGTTGAAG < 41bp 1 0.0514483077781587 1 0.0138449668884277 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 12 FANCI ENSG00000140525 UTR3 Human protein_coding chr15:89860358 chr15:89860349 . . 0 hm6A_associated_SNPs_16421 2 0 1 1 89860342 89860362 mRNA hsa-miR-590-3p FANCI miRanda miRanda
14034 chr15 89860350 89860350 1 + A C rs1061316 89860358 + 89860338 89860378 41 ATAGAATAAATTATCTTTAAACATTTCTTCTGTGGTTGAAG ATAGAATAAATTCTCTTTAAACATTTCTTCTGTGGTTGAAG < 41bp 1 0.0407676847255139 1 0.0201895833015442 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 13 FANCI ENSG00000140525 UTR3 Human protein_coding chr15:89860358 chr15:89860350 . . 0 hm6A_associated_SNPs_16422 2 0 1 1 89860342 89860362 mRNA hsa-miR-590-3p FANCI miRanda miRanda
14034 chr15 90170920 90170920 1 + A C rs76530445 90170924 + 90170904 90170944 41 GAGCAGCCACATTTTCAAGGACTGTCCAAGAGCCAGCCAGT GAGCAGCCACATTTTCCAGGACTGTCCAAGAGCCAGCCAGT < 41bp 1 0.684449208922218 1 0.984142899513245 experiment 0.631101582155564 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 TICRR ENSG00000140534 UTR3 Human protein_coding chr15:90170924 chr15:90170920 . . 0 hm6A_associated_SNPs_16436 0 0 1 1 90170918 90170940 mRNA hsa-miR-149 C15orf42 miRanda miRanda
14034 chr15 90170933 90170933 1 + G A rs3743371 90170924 + 90170904 90170944 41 GAGCAGCCACATTTTCAAGGACTGTCCAAGAGCCAGCCAGT GAGCAGCCACATTTTCAAGGACTGTCCAAAAGCCAGCCAGT < 41bp 1 0.759306894422394 1 0.994825601577759 experiment 0.481386211155211 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 TICRR ENSG00000140534 UTR3 Human protein_coding chr15:90170924 chr15:90170933 . . 0 hm6A_associated_SNPs_16437 0 0 1 1 90170918 90170940 mRNA hsa-miR-149 C15orf42 miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772139 + 90772119 90772159 41 GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAAAAA GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAGAAA < 41bp 1 0.661410650856598 1 0.901619791984558 experiment 0.677178698286803 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772139 chr15:90772156 . . 0 hm6A_associated_SNPs_16444 0 0 1 5 90772136 90772157 mRNA hsa-miR-30a SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772139 + 90772119 90772159 41 GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAAAAA GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAGAAA < 41bp 1 0.661410650856598 1 0.901619791984558 experiment 0.677178698286803 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772139 chr15:90772156 . . 0 hm6A_associated_SNPs_16444 0 0 1 5 90772135 90772157 mRNA hsa-miR-30c SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772139 + 90772119 90772159 41 GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAAAAA GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAGAAA < 41bp 1 0.661410650856598 1 0.901619791984558 experiment 0.677178698286803 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772139 chr15:90772156 . . 0 hm6A_associated_SNPs_16444 0 0 1 5 90772136 90772157 mRNA hsa-miR-30d SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772139 + 90772119 90772159 41 GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAAAAA GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAGAAA < 41bp 1 0.661410650856598 1 0.901619791984558 experiment 0.677178698286803 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772139 chr15:90772156 . . 0 hm6A_associated_SNPs_16444 0 0 1 5 90772136 90772157 mRNA hsa-miR-30b SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772139 + 90772119 90772159 41 GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAAAAA GAACAGTGCTCCTTATGTAAACTGAGCCCTTTGTTTAGAAA < 41bp 1 0.661410650856598 1 0.901619791984558 experiment 0.677178698286803 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772139 chr15:90772156 . . 0 hm6A_associated_SNPs_16444 0 0 1 5 90772136 90772157 mRNA hsa-miR-30e SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772160 + 90772140 90772180 41 CTGAGCCCTTTGTTTAAAAAACAATTCCAAATGTGAAACTA CTGAGCCCTTTGTTTAGAAAACAATTCCAAATGTGAAACTA < 41bp 1 0.696926529151471 1 0.779121100902557 experiment 0.606146941697058 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772160 chr15:90772156 . . 0 hm6A_associated_SNPs_16445 0 0 1 5 90772136 90772157 mRNA hsa-miR-30a SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772160 + 90772140 90772180 41 CTGAGCCCTTTGTTTAAAAAACAATTCCAAATGTGAAACTA CTGAGCCCTTTGTTTAGAAAACAATTCCAAATGTGAAACTA < 41bp 1 0.696926529151471 1 0.779121100902557 experiment 0.606146941697058 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772160 chr15:90772156 . . 0 hm6A_associated_SNPs_16445 0 0 1 5 90772135 90772157 mRNA hsa-miR-30c SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772160 + 90772140 90772180 41 CTGAGCCCTTTGTTTAAAAAACAATTCCAAATGTGAAACTA CTGAGCCCTTTGTTTAGAAAACAATTCCAAATGTGAAACTA < 41bp 1 0.696926529151471 1 0.779121100902557 experiment 0.606146941697058 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772160 chr15:90772156 . . 0 hm6A_associated_SNPs_16445 0 0 1 5 90772136 90772157 mRNA hsa-miR-30d SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772160 + 90772140 90772180 41 CTGAGCCCTTTGTTTAAAAAACAATTCCAAATGTGAAACTA CTGAGCCCTTTGTTTAGAAAACAATTCCAAATGTGAAACTA < 41bp 1 0.696926529151471 1 0.779121100902557 experiment 0.606146941697058 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772160 chr15:90772156 . . 0 hm6A_associated_SNPs_16445 0 0 1 5 90772136 90772157 mRNA hsa-miR-30b SEMA4B miRanda miRanda
14034 chr15 90772156 90772156 1 + A G rs11547961 90772160 + 90772140 90772180 41 CTGAGCCCTTTGTTTAAAAAACAATTCCAAATGTGAAACTA CTGAGCCCTTTGTTTAGAAAACAATTCCAAATGTGAAACTA < 41bp 1 0.696926529151471 1 0.779121100902557 experiment 0.606146941697058 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772160 chr15:90772156 . . 0 hm6A_associated_SNPs_16445 0 0 1 5 90772136 90772157 mRNA hsa-miR-30e SEMA4B miRanda miRanda
14034 chr15 90772167 90772167 1 + C A rs143609113 90772160 + 90772140 90772180 41 CTGAGCCCTTTGTTTAAAAAACAATTCCAAATGTGAAACTA CTGAGCCCTTTGTTTAAAAAACAATTCAAAATGTGAAACTA < 41bp 1 0.749826369343998 1 0.833979725837708 experiment 0.500347261312004 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772160 chr15:90772167 . . 0 hm6A_associated_SNPs_16446 0 0 0 2 90772159 90772176 mRNA hsa-miR-23a SEMA4B miRanda miRanda
14034 chr15 90772167 90772167 1 + C A rs143609113 90772160 + 90772140 90772180 41 CTGAGCCCTTTGTTTAAAAAACAATTCCAAATGTGAAACTA CTGAGCCCTTTGTTTAAAAAACAATTCAAAATGTGAAACTA < 41bp 1 0.749826369343998 1 0.833979725837708 experiment 0.500347261312004 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772160 chr15:90772167 . . 0 hm6A_associated_SNPs_16446 0 0 0 2 90772159 90772176 mRNA hsa-miR-23b SEMA4B miRanda miRanda
14034 chr15 90772167 90772167 1 + C A rs143609113 90772177 + 90772157 90772197 41 AAAACAATTCCAAATGTGAAACTAGAATGAGAGGGAAGAGA AAAACAATTCAAAATGTGAAACTAGAATGAGAGGGAAGAGA < 41bp 1 0.610759695508806 1 0.845533549785614 experiment 0.778480608982388 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772177 chr15:90772167 . . 0 hm6A_associated_SNPs_16447 0 0 0 2 90772159 90772176 mRNA hsa-miR-23a SEMA4B miRanda miRanda
14034 chr15 90772167 90772167 1 + C A rs143609113 90772177 + 90772157 90772197 41 AAAACAATTCCAAATGTGAAACTAGAATGAGAGGGAAGAGA AAAACAATTCAAAATGTGAAACTAGAATGAGAGGGAAGAGA < 41bp 1 0.610759695508806 1 0.845533549785614 experiment 0.778480608982388 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 SEMA4B ENSG00000185033 UTR3 Human protein_coding chr15:90772177 chr15:90772167 . . 0 hm6A_associated_SNPs_16447 0 0 0 2 90772159 90772176 mRNA hsa-miR-23b SEMA4B miRanda miRanda
14034 chr15 90772493 90772493 1 + G T rs147941876 90772499 + 90772479 90772519 41 TCACCAGGTCCTGGGCTCGGACCCAACTCCTGGACCTTTCC TCACCAGGTCCTGGTCTCGGACCCAACTCCTGGACCTTTCC < 41bp 1 0.696782628306435 1 0.916293144226074 experiment 0.60643474338713 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90772499 chr15:90772493 nonsynonymous SNV . 0 hm6A_associated_SNPs_16448 0 0 1 2 90772476 90772498 mRNA hsa-miR-551b SEMA4B miRanda miRanda
14034 chr15 90772493 90772493 1 + G T rs147941876 90772499 + 90772479 90772519 41 TCACCAGGTCCTGGGCTCGGACCCAACTCCTGGACCTTTCC TCACCAGGTCCTGGTCTCGGACCCAACTCCTGGACCTTTCC < 41bp 1 0.696782628306435 1 0.916293144226074 experiment 0.60643474338713 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90772499 chr15:90772493 nonsynonymous SNV . 0 hm6A_associated_SNPs_16448 0 0 1 2 90772478 90772499 mRNA hsa-miR-615-3p SEMA4B miRanda miRanda
14034 chr15 90772493 90772493 1 + G T rs147941876 90772512 + 90772492 90772532 41 GGCTCGGACCCAACTCCTGGACCTTTCCAGCCTGTATCAGG GTCTCGGACCCAACTCCTGGACCTTTCCAGCCTGTATCAGG < 41bp 1 0.765603942426985 1 0.932771146297455 experiment 0.46879211514603 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90772512 chr15:90772493 nonsynonymous SNV . 0 hm6A_associated_SNPs_16449 0 0 1 2 90772476 90772498 mRNA hsa-miR-551b SEMA4B miRanda miRanda
14034 chr15 90772493 90772493 1 + G T rs147941876 90772512 + 90772492 90772532 41 GGCTCGGACCCAACTCCTGGACCTTTCCAGCCTGTATCAGG GTCTCGGACCCAACTCCTGGACCTTTCCAGCCTGTATCAGG < 41bp 1 0.765603942426985 1 0.932771146297455 experiment 0.46879211514603 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90772512 chr15:90772493 nonsynonymous SNV . 0 hm6A_associated_SNPs_16449 0 0 1 2 90772478 90772499 mRNA hsa-miR-615-3p SEMA4B miRanda miRanda
14034 chr15 90815363 90815363 1 + T C rs185429041 90815373 + 90815353 90815393 41 ATTTCCTTCTTGATCAGTGAACACTAACATTTTGGGGACAA ATTTCCTTCTCGATCAGTGAACACTAACATTTTGGGGACAA < 41bp 1 0.719819081564325 1 0.20346474647522 experiment 0.56036183687135 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 11 NGRN ENSG00000182768;ENSG00000261147 UTR3 Human other chr15:90815373 chr15:90815363 . . 0 hm6A_associated_SNPs_16452 0 0 1 1 90815347 90815368 mRNA hsa-miR-383 NGRN miRanda miRanda
14034 chr15 90815363 90815363 1 + T C rs185429041 90815379 + 90815359 90815399 41 TTCTTGATCAGTGAACACTAACATTTTGGGGACAACTTAGT TTCTCGATCAGTGAACACTAACATTTTGGGGACAACTTAGT < 41bp 1 0.72623975521007 1 0.074312150478363 experiment 0.547520489579859 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 5 NGRN ENSG00000182768;ENSG00000261147 UTR3 Human other chr15:90815379 chr15:90815363 . . 0 hm6A_associated_SNPs_16453 0 0 1 1 90815347 90815368 mRNA hsa-miR-383 NGRN miRanda miRanda
14034 chr15 91186049 91186049 1 + G A rs77185444 91186036 + 91186016 91186056 41 AGTACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCA AGTACACCTTTTCCTTATGGACCAGAGGAAGAGAAAGACCA < 41bp 1 0.686339789287601 1 0.98321795463562 experiment 0.627320421424798 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186036 chr15:91186049 . . 0 hm6A_associated_SNPs_16468 0 0 1 3 91186035 91186058 mRNA hsa-miR-135a CRTC3 miRanda miRanda
14034 chr15 91186049 91186049 1 + G A rs77185444 91186036 + 91186016 91186056 41 AGTACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCA AGTACACCTTTTCCTTATGGACCAGAGGAAGAGAAAGACCA < 41bp 1 0.686339789287601 1 0.98321795463562 experiment 0.627320421424798 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186036 chr15:91186049 . . 0 hm6A_associated_SNPs_16468 0 0 1 3 91186049 91186070 mRNA hsa-miR-134 CRTC3 miRanda miRanda
14034 chr15 91186049 91186049 1 + G A rs77185444 91186036 + 91186016 91186056 41 AGTACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCA AGTACACCTTTTCCTTATGGACCAGAGGAAGAGAAAGACCA < 41bp 1 0.686339789287601 1 0.98321795463562 experiment 0.627320421424798 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186036 chr15:91186049 . . 0 hm6A_associated_SNPs_16468 0 0 1 3 91186035 91186058 mRNA hsa-miR-135b CRTC3 miRanda miRanda
14034 chr15 91186049 91186049 1 + G A rs77185444 91186053 + 91186033 91186073 41 TGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGAA TGGACCAGAGGAAGAGAAAGACCATTTTATCAGTCACTGAA < 41bp 1 0.575687844157442 1 0.968177258968353 experiment 0.848624311685115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186053 chr15:91186049 . . 0 hm6A_associated_SNPs_16469 0 0 1 3 91186035 91186058 mRNA hsa-miR-135a CRTC3 miRanda miRanda
14034 chr15 91186049 91186049 1 + G A rs77185444 91186053 + 91186033 91186073 41 TGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGAA TGGACCAGAGGAAGAGAAAGACCATTTTATCAGTCACTGAA < 41bp 1 0.575687844157442 1 0.968177258968353 experiment 0.848624311685115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186053 chr15:91186049 . . 0 hm6A_associated_SNPs_16469 0 0 1 3 91186049 91186070 mRNA hsa-miR-134 CRTC3 miRanda miRanda
14034 chr15 91186049 91186049 1 + G A rs77185444 91186053 + 91186033 91186073 41 TGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGAA TGGACCAGAGGAAGAGAAAGACCATTTTATCAGTCACTGAA < 41bp 1 0.575687844157442 1 0.968177258968353 experiment 0.848624311685115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186053 chr15:91186049 . . 0 hm6A_associated_SNPs_16469 0 0 1 3 91186035 91186058 mRNA hsa-miR-135b CRTC3 miRanda miRanda
14034 chr15 91186129 91186129 1 + G A rs191855019 91186140 + 91186120 91186160 41 TCGGGGGCTGGGGAAGGAAGACAGGGACTGCAGGTGTCTCA TCGGGGGCTAGGGAAGGAAGACAGGGACTGCAGGTGTCTCA < 41bp 1 0.546172979441727 1 0.961653470993042 experiment 0.907654041116545 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186140 chr15:91186129 . . 0 hm6A_associated_SNPs_16470 0 0 1 1 91186124 91186146 mRNA hsa-miR-339-5p CRTC3 miRanda miRanda
14034 chr15 91188073 91188073 1 + T G rs142409472 91188053 + 91188033 91188073 41 AGCTGCATACTTCAGAGTAAACTATTTTTCATTATTTAGTT AGCTGCATACTTCAGAGTAAACTATTTTTCATTATTTAGTG < 41bp 1 0.350869706864368 1 0.848994374275208 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91188053 chr15:91188073 . . 0 hm6A_associated_SNPs_16474 0 0 1 2 91188058 91188081 mRNA hsa-miR-19a CRTC3 miRanda miRanda
14034 chr15 91188073 91188073 1 + T G rs142409472 91188053 + 91188033 91188073 41 AGCTGCATACTTCAGAGTAAACTATTTTTCATTATTTAGTT AGCTGCATACTTCAGAGTAAACTATTTTTCATTATTTAGTG < 41bp 1 0.350869706864368 1 0.848994374275208 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91188053 chr15:91188073 . . 0 hm6A_associated_SNPs_16474 0 0 1 2 91188062 91188083 mRNA hsa-miR-758 CRTC3 miRanda miRanda
14034 chr15 91426626 91426626 1 + A G rs143669943 91426631 + 91426611 91426651 41 TTGCTGGTTCTATTTAATGGACATGAGATAATGTTAGAGGT TTGCTGGTTCTATTTGATGGACATGAGATAATGTTAGAGGT < 41bp 1 0.775529283299524 1 0.921618700027466 experiment 0.448941433400952 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 16 FURIN ENSG00000140564 UTR3 Human protein_coding chr15:91426631 chr15:91426626 . . 0 hm6A_associated_SNPs_16484 0 0 1 1 91426611 91426633 mRNA hsa-miR-136 FURIN miRanda miRanda
14034 chr15 91456531 91456531 1 + A G rs77668747 91456542 + 91456522 91456562 41 GGACATATCATCCCTGGTGGACATCCGGGACTACGTCAACA GGACATATCGTCCCTGGTGGACATCCGGGACTACGTCAACA < 41bp 1 0.728682407649245 1 0.950678110122681 experiment 0.542635184701509 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 10 MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456542 chr15:91456531 synonymous SNV . 0 hm6A_associated_SNPs_16488 0 0 1 3 91456510 91456531 mRNA hsa-miR-219-5p MAN2A2 miRanda miRanda
14034 chr15 91456531 91456531 1 + A G rs77668747 91456542 + 91456522 91456562 41 GGACATATCATCCCTGGTGGACATCCGGGACTACGTCAACA GGACATATCGTCCCTGGTGGACATCCGGGACTACGTCAACA < 41bp 1 0.728682407649245 1 0.950678110122681 experiment 0.542635184701509 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 10 MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456542 chr15:91456531 synonymous SNV . 0 hm6A_associated_SNPs_16488 0 0 1 3 91456509 91456531 mRNA hsa-miR-190 MAN2A2 miRanda miRanda
14034 chr15 91456531 91456531 1 + A G rs77668747 91456542 + 91456522 91456562 41 GGACATATCATCCCTGGTGGACATCCGGGACTACGTCAACA GGACATATCGTCCCTGGTGGACATCCGGGACTACGTCAACA < 41bp 1 0.728682407649245 1 0.950678110122681 experiment 0.542635184701509 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 10 MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456542 chr15:91456531 synonymous SNV . 0 hm6A_associated_SNPs_16488 0 0 1 3 91456510 91456531 mRNA hsa-miR-190b MAN2A2 miRanda miRanda
14034 chr15 91505157 91505157 1 + C T rs141979320 91505137 + 91505117 91505157 41 ACCCTCAAGCACGGTCCTAAACTTGTCTGCACTTTAGAAAC ACCCTCAAGCACGGTCCTAAACTTGTCTGCACTTTAGAAAT < 41bp 1 0.784494057310717 1 0.945841491222382 experiment 0.431011885378566 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 RCCD1 ENSG00000166965 UTR3 Human protein_coding chr15:91505137 chr15:91505157 . . 0 hm6A_associated_SNPs_16491 0 0 1 1 91505150 91505172 mRNA hsa-miR-216b RCCD1 miRanda miRanda
14034 chr15 91505157 91505157 1 + C T rs141979320 91505156 + 91505136 91505176 41 AACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAA AACTTGTCTGCACTTTAGAAATACCTGGAGAGCATTGAAAA Direct Loss 1 0.71369387896409 1 0.90829074382782 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 RCCD1 ENSG00000166965 UTR3 Human protein_coding chr15:91505156 chr15:91505157 . . 0 hm6A_associated_SNPs_16492 0 0 1 1 91505150 91505172 mRNA hsa-miR-216b RCCD1 miRanda miRanda
14034 chr15 91505165 91505165 1 + G C rs74039174 91505156 + 91505136 91505176 41 AACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAA AACTTGTCTGCACTTTAGAAACACCTGGACAGCATTGAAAA < 41bp 1 0.687934000948948 1 0.939558207988739 experiment 0.624131998102104 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 RCCD1 ENSG00000166965 UTR3 Human protein_coding chr15:91505156 chr15:91505165 . . 0 hm6A_associated_SNPs_16493 0 0 1 1 91505150 91505172 mRNA hsa-miR-216b RCCD1 miRanda miRanda
14034 chr15 92671614 92671614 1 + G A rs149300624 92671604 + 92671584 92671624 41 AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTGCAATA AGCACCTGGCTCAGCCCTGGACCCCTACTCACCCTGCAATA < 41bp 1 0.136385509575837 1 0.588161170482635 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671604 chr15:92671614 nonsynonymous SNV . 0 hm6A_associated_SNPs_16497 0 0 1 1 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr15 92671614 92671614 1 + G A rs149300624 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCACCCTGCAATAATAACTGTGAATGCCAAACCGATT < 41bp 1 0.316562049199772 1 0.936464071273804 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671614 nonsynonymous SNV . 0 hm6A_associated_SNPs_16498 0 0 1 1 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr15 96881075 96881075 1 + C T rs193295717 96881065 + 96881045 96881085 41 TGCATTAAAAAAAAAAAAAAACTCCTGTGTCGGTCAGAACA TGCATTAAAAAAAAAAAAAAACTCCTGTGTTGGTCAGAACA < 41bp 1 0.509355310213811 1 0.886056780815125 experiment 0.981289379572379 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 31 NR2F2 ENSG00000185551 UTR3 Human protein_coding chr15:96881065 chr15:96881075 . . 0 hm6A_associated_SNPs_16509 0 0 1 2 96881065 96881087 mRNA hsa-miR-375 NR2F2 miRanda miRanda
14034 chr15 96881075 96881075 1 + C T rs193295717 96881065 + 96881045 96881085 41 TGCATTAAAAAAAAAAAAAAACTCCTGTGTCGGTCAGAACA TGCATTAAAAAAAAAAAAAAACTCCTGTGTTGGTCAGAACA < 41bp 1 0.509355310213811 1 0.886056780815125 experiment 0.981289379572379 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 31 NR2F2 ENSG00000185551 UTR3 Human protein_coding chr15:96881065 chr15:96881075 . . 0 hm6A_associated_SNPs_16509 0 0 1 2 96881070 96881090 mRNA hsa-miR-382 NR2F2 miRanda miRanda
14034 chr15 96881353 96881353 1 + G A rs190259021 96881350 + 96881330 96881370 41 ATAATCTTGGCTTCTTAAAAACTGTGTATCATTAAAATATA ATAATCTTGGCTTCTTAAAAACTATGTATCATTAAAATATA < 41bp 1 0.366860978018482 1 0.437750935554504 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 24 NR2F2 ENSG00000185551 UTR3 Human protein_coding chr15:96881350 chr15:96881353 . . 0 hm6A_associated_SNPs_16510 0 0 1 3 96881337 96881357 mRNA hsa-miR-27a NR2F2 miRanda miRanda
14034 chr15 96881353 96881353 1 + G A rs190259021 96881350 + 96881330 96881370 41 ATAATCTTGGCTTCTTAAAAACTGTGTATCATTAAAATATA ATAATCTTGGCTTCTTAAAAACTATGTATCATTAAAATATA < 41bp 1 0.366860978018482 1 0.437750935554504 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 24 NR2F2 ENSG00000185551 UTR3 Human protein_coding chr15:96881350 chr15:96881353 . . 0 hm6A_associated_SNPs_16510 0 0 1 3 96881337 96881357 mRNA hsa-miR-27b NR2F2 miRanda miRanda
14034 chr15 96881353 96881353 1 + G A rs190259021 96881350 + 96881330 96881370 41 ATAATCTTGGCTTCTTAAAAACTGTGTATCATTAAAATATA ATAATCTTGGCTTCTTAAAAACTATGTATCATTAAAATATA < 41bp 1 0.366860978018482 1 0.437750935554504 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 24 NR2F2 ENSG00000185551 UTR3 Human protein_coding chr15:96881350 chr15:96881353 . . 0 hm6A_associated_SNPs_16510 0 0 1 3 96881336 96881356 mRNA hsa-miR-128 NR2F2 miRanda miRanda
14034 chr15 99926398 99926398 1 + C T rs557122600 99926413 + 99926393 99926433 41 CAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGAT CAATGTGGGGGCACTGCAGAACTCTCTAGAAATGTCATGAT < 41bp 1 0.751660370521104 1 0.858997344970703 experiment 0.496679258957791 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 6 LRRC28 ENSG00000168904 UTR3 Human protein_coding chr15:99926413 chr15:99926398 . . 0 hm6A_associated_SNPs_16551 0 0 1 1 99926391 99926414 mRNA hsa-miR-544 LRRC28 miRanda miRanda
14034 chr15 101456512 101456512 1 + C A rs142533835 101456509 + 101456489 101456529 41 TTTATCTCAAGTAGATATAGACACTAACCTTGATAGTGATA TTTATCTCAAGTAGATATAGACAATAACCTTGATAGTGATA < 41bp 1 0.584474500579571 1 0.413100153207779 experiment 0.831050998840858 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 24 LOC101927751 ENSG00000259583 ncRNA_intronic Human antisense chr15:101456509 chr15:101456512 . . 0 hm6A_associated_SNPs_16567 0 0 1 1 101456495 101456519 mRNA hsa-miR-196a ALDH1A3 miRanda miRanda
14034 chr16 449659 449659 1 + G A rs14293 449674 + 449654 449694 41 GCCTCGAGGGCCATGATTGGACACACCGACTCGGCTGAGGC GCCTCAAGGGCCATGATTGGACACACCGACTCGGCTGAGGC < 41bp 1 0.687897720915034 1 0.871992468833923 experiment 0.624204558169931 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 NME4 ENSG00000103202 CDS Human protein_coding chr16:449674 chr16:449659 synonymous SNV . 0 hm6A_associated_SNPs_16577 0 0 1 1 449646 449667 mRNA hsa-miR-328 NME4 miRanda miRanda
14034 chr16 450413 450413 1 + C T rs542949601 450422 + 450402 450442 41 GAACCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACT GAACCCAAGCCTACATCCAAACCTGCCTGTCCCAAACCACT < 41bp 1 0.793036122277901 1 0.948663830757141 experiment 0.413927755444197 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 NME4 ENSG00000103202 UTR3 Human protein_coding chr16:450422 chr16:450413 . . 0 hm6A_associated_SNPs_16578 0 0 1 1 450397 450418 mRNA hsa-miR-299-3p NME4 miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375216 + 1375196 1375236 41 TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTGT TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTAT < 41bp 1 0.566626952792449 1 0.73652583360672 experiment 0.866746094415103 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 40 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375216 chr16:1375235 . . 0 hm6A_associated_SNPs_16634 0 0 1 6 1375222 1375243 mRNA hsa-miR-15a UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375216 + 1375196 1375236 41 TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTGT TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTAT < 41bp 1 0.566626952792449 1 0.73652583360672 experiment 0.866746094415103 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 40 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375216 chr16:1375235 . . 0 hm6A_associated_SNPs_16634 0 0 1 6 1375222 1375243 mRNA hsa-miR-16 UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375216 + 1375196 1375236 41 TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTGT TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTAT < 41bp 1 0.566626952792449 1 0.73652583360672 experiment 0.866746094415103 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 40 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375216 chr16:1375235 . . 0 hm6A_associated_SNPs_16634 0 0 1 6 1375222 1375243 mRNA hsa-miR-15b UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375216 + 1375196 1375236 41 TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTGT TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTAT < 41bp 1 0.566626952792449 1 0.73652583360672 experiment 0.866746094415103 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 40 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375216 chr16:1375235 . . 0 hm6A_associated_SNPs_16634 0 0 1 6 1375223 1375243 mRNA hsa-miR-195 UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375216 + 1375196 1375236 41 TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTGT TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTAT < 41bp 1 0.566626952792449 1 0.73652583360672 experiment 0.866746094415103 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 40 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375216 chr16:1375235 . . 0 hm6A_associated_SNPs_16634 0 0 1 6 1375220 1375243 mRNA hsa-miR-424 UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375216 + 1375196 1375236 41 TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTGT TCCTGCCGCTCCTCTCTAGAACCTTCTAGAACCTGGGCTAT < 41bp 1 0.566626952792449 1 0.73652583360672 experiment 0.866746094415103 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 40 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375216 chr16:1375235 . . 0 hm6A_associated_SNPs_16634 0 0 1 6 1375222 1375243 mRNA hsa-miR-497 UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375255 + 1375235 1375275 41 GTGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT ATGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT < 41bp 1 0.257687905632586 1 0.612074732780457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375255 chr16:1375235 . . 0 hm6A_associated_SNPs_16635 0 0 1 6 1375222 1375243 mRNA hsa-miR-15a UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375255 + 1375235 1375275 41 GTGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT ATGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT < 41bp 1 0.257687905632586 1 0.612074732780457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375255 chr16:1375235 . . 0 hm6A_associated_SNPs_16635 0 0 1 6 1375222 1375243 mRNA hsa-miR-16 UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375255 + 1375235 1375275 41 GTGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT ATGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT < 41bp 1 0.257687905632586 1 0.612074732780457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375255 chr16:1375235 . . 0 hm6A_associated_SNPs_16635 0 0 1 6 1375222 1375243 mRNA hsa-miR-15b UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375255 + 1375235 1375275 41 GTGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT ATGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT < 41bp 1 0.257687905632586 1 0.612074732780457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375255 chr16:1375235 . . 0 hm6A_associated_SNPs_16635 0 0 1 6 1375223 1375243 mRNA hsa-miR-195 UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375255 + 1375235 1375275 41 GTGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT ATGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT < 41bp 1 0.257687905632586 1 0.612074732780457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375255 chr16:1375235 . . 0 hm6A_associated_SNPs_16635 0 0 1 6 1375220 1375243 mRNA hsa-miR-424 UBE2I miRanda miRanda
14034 chr16 1375235 1375235 1 + G A rs116868327 1375255 + 1375235 1375275 41 GTGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT ATGCTGCTTTTGAGCCTCAGACCCCAGGTCAGCATCTCGGT < 41bp 1 0.257687905632586 1 0.612074732780457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375255 chr16:1375235 . . 0 hm6A_associated_SNPs_16635 0 0 1 6 1375222 1375243 mRNA hsa-miR-497 UBE2I miRanda miRanda
14034 chr16 1399321 1399321 1 - G A rs149496703 1399332 - 1399312 1399352 41 TCTTTGCGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCC TCTTTGCGGCTGCTGGCAGGACTGAGCTGTCTGGGTTCTCC < 41bp 1 0.741883458603836 1 0.812083601951599 experiment 0.516233082792327 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 BAIAP3;TSR3 ENSG00000007516;ENSG00000007520 UTR3 Human other chr16:1399332 chr16:1399321 . . 0 hm6A_associated_SNPs_16641 0 0 1 1 1399307 1399330 mRNA hsa-miR-491-5p C16orf42 miRanda miRanda
14034 chr16 1605053 1605053 1 + C A rs12443939 1605073 + 1605053 1605093 41 CGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGAC AGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGAC < 41bp 1 0.589939732674158 1 0.932032823562622 experiment 0.820120534651685 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 TMEM204 ENSG00000131634 UTR3 Human protein_coding chr16:1605073 chr16:1605053 . . 0 hm6A_associated_SNPs_16654 0 0 0 1 1605038 1605059 mRNA hsa-miR-218 TMEM204 miRanda miRanda
14034 chr16 1839134 1839134 1 + T C rs1065666 1839117 + 1839097 1839137 41 AGTGCCCCCTAAGGGGGCGAACTGACCTCAGGCATGTTTTG AGTGCCCCCTAAGGGGGCGAACTGACCTCAGGCATGTCTTG < 41bp 1 0.518257366148233 1 0.910069584846497 experiment 0.963485267703533 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 38 NUBP2 ENSG00000095906 UTR3 Human protein_coding chr16:1839117 chr16:1839134 . . 0 hm6A_associated_SNPs_16678 0 1 1 1 1839122 1839147 mRNA hsa-miR-139-5p NUBP2 miRanda miRanda
14034 chr16 1839134 1839134 1 + T C rs1065666 1839140 + 1839120 1839160 41 GACCTCAGGCATGTTTTGTAACTGTAGAGGCGCCTGCCATT GACCTCAGGCATGTCTTGTAACTGTAGAGGCGCCTGCCATT < 41bp 1 0.430410228962211 1 0.900744557380676 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 NUBP2 ENSG00000095906 UTR3 Human protein_coding chr16:1839140 chr16:1839134 . . 0 hm6A_associated_SNPs_16679 0 1 1 1 1839122 1839147 mRNA hsa-miR-139-5p NUBP2 miRanda miRanda
14034 chr16 1878457 1878457 1 + T C rs148196681 1878437 + 1878417 1878457 41 TTCGGAAAACATTTTATCAAACCAAATGTTAAAAAGACTTT TTCGGAAAACATTTTATCAAACCAAATGTTAAAAAGACTTC < 41bp 1 0.068467731553767 1 0.977092027664185 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878437 chr16:1878457 . . 0 hm6A_associated_SNPs_16681 0 0 1 1 1878451 1878475 mRNA hsa-miR-145 FAHD1 miRanda miRanda
14034 chr16 1878457 1878457 1 + T C rs148196681 1878453 + 1878433 1878473 41 TCAAACCAAATGTTAAAAAGACTTTCCTTTTGTAAAACTGG TCAAACCAAATGTTAAAAAGACTTCCCTTTTGTAAAACTGG < 41bp 1 0.269795954900424 1 0.978097021579742 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878453 chr16:1878457 . . 0 hm6A_associated_SNPs_16682 0 0 1 1 1878451 1878475 mRNA hsa-miR-145 FAHD1 miRanda miRanda
14034 chr16 1878457 1878457 1 + T C rs148196681 1878469 + 1878449 1878489 41 AAAGACTTTCCTTTTGTAAAACTGGATTAGAGAAGACTTTT AAAGACTTCCCTTTTGTAAAACTGGATTAGAGAAGACTTTT < 41bp 1 0.190375984281016 1 0.971515834331512 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878469 chr16:1878457 . . 0 hm6A_associated_SNPs_16683 0 0 1 1 1878451 1878475 mRNA hsa-miR-145 FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878497 1878521 mRNA hsa-miR-141 FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878509 1878529 mRNA hsa-miR-302a FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878507 1878529 mRNA hsa-miR-302b FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878505 1878529 mRNA hsa-miR-302c FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878508 1878529 mRNA hsa-miR-302d FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878508 1878529 mRNA hsa-miR-372 FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878507 1878529 mRNA hsa-miR-373 FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878509 1878529 mRNA hsa-miR-520e FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878508 1878529 mRNA hsa-miR-520a-3p FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878509 1878529 mRNA hsa-miR-520b FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878508 1878529 mRNA hsa-miR-520c-3p FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878507 1878529 mRNA hsa-miR-520d-3p FAHD1 miRanda miRanda
14034 chr16 1878521 1878521 1 + C G rs1065584 1878533 + 1878513 1878553 41 CAGTAGTTCAGCACTTAAAAACTGCAGAGAAAACTGAAAGT CAGTAGTTGAGCACTTAAAAACTGCAGAGAAAACTGAAAGT < 41bp 1 0.456176132348414 1 0.974961936473846 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878533 chr16:1878521 . . 0 hm6A_associated_SNPs_16685 0 0 1 13 1878513 1878529 mRNA hsa-miR-302e FAHD1 miRanda miRanda
14034 chr16 1878740 1878740 1 + A G rs1065587 1878749 + 1878729 1878769 41 CTTATCAGGAAATGTGAAAAACACTCCTGTACATAATCGGT CTTATCAGGAAGTGTGAAAAACACTCCTGTACATAATCGGT < 41bp 1 0.679121793588852 1 0.859625816345215 experiment 0.641756412822296 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 12 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878749 chr16:1878740 . . 0 hm6A_associated_SNPs_16687 0 0 1 3 1878726 1878746 mRNA hsa-miR-23a FAHD1 miRanda miRanda
14034 chr16 1878740 1878740 1 + A G rs1065587 1878749 + 1878729 1878769 41 CTTATCAGGAAATGTGAAAAACACTCCTGTACATAATCGGT CTTATCAGGAAGTGTGAAAAACACTCCTGTACATAATCGGT < 41bp 1 0.679121793588852 1 0.859625816345215 experiment 0.641756412822296 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 12 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878749 chr16:1878740 . . 0 hm6A_associated_SNPs_16687 0 0 1 3 1878722 1878746 mRNA hsa-miR-23b FAHD1 miRanda miRanda
14034 chr16 1878740 1878740 1 + A G rs1065587 1878749 + 1878729 1878769 41 CTTATCAGGAAATGTGAAAAACACTCCTGTACATAATCGGT CTTATCAGGAAGTGTGAAAAACACTCCTGTACATAATCGGT < 41bp 1 0.679121793588852 1 0.859625816345215 experiment 0.641756412822296 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 12 FAHD1 ENSG00000180185 UTR3 Human protein_coding chr16:1878749 chr16:1878740 . . 0 hm6A_associated_SNPs_16687 0 0 1 3 1878735 1878756 mRNA hsa-miR-122 FAHD1 miRanda miRanda
14034 chr16 2508710 2508710 1 + A C rs531194758 2508725 + 2508705 2508745 41 GTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGA GTGAGCACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGA < 41bp 1 0.344986594842076 1 0.188500642776489 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 6 CCNF ENSG00000260874 ncRNA_intronic Human lincRNA chr16:2508725 chr16:2508710 . . 0 hm6A_associated_SNPs_16729 0 0 1 1 2508709 2508732 mRNA hsa-miR-139-5p CCNF miRanda miRanda
14034 chr16 2552991 2552991 1 + T G rs182867476 2552981 + 2552961 2553001 41 GTGCTCACCCACATTCTATGACTGGAATGCTGCAAGCCTCT GTGCTCACCCACATTCTATGACTGGAATGCGGCAAGCCTCT < 41bp 1 0.714200376021289 1 0.825793385505676 experiment 0.571599247957422 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 TBC1D24 ENSG00000162065 UTR3 Human protein_coding chr16:2552981 chr16:2552991 . . 0 hm6A_associated_SNPs_16740 0 0 1 2 2552972 2552994 mRNA hsa-miR-103 TBC1D24 miRanda miRanda
14034 chr16 2552991 2552991 1 + T G rs182867476 2552981 + 2552961 2553001 41 GTGCTCACCCACATTCTATGACTGGAATGCTGCAAGCCTCT GTGCTCACCCACATTCTATGACTGGAATGCGGCAAGCCTCT < 41bp 1 0.714200376021289 1 0.825793385505676 experiment 0.571599247957422 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 TBC1D24 ENSG00000162065 UTR3 Human protein_coding chr16:2552981 chr16:2552991 . . 0 hm6A_associated_SNPs_16740 0 0 1 2 2552972 2552994 mRNA hsa-miR-107 TBC1D24 miRanda miRanda
14034 chr16 2949248 2949248 1 + T A rs7281 2949250 + 2949230 2949270 41 TGGGTGAATCTTTGCTTTTAACATTGTGTGATTTCTTTTCT TGGGTGAATCTTTGCTTTAAACATTGTGTGATTTCTTTTCT < 41bp 1 0.219454995195491 1 0.291603684425354 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 FLYWCH2 ENSG00000162076 UTR3 Human protein_coding chr16:2949250 chr16:2949248 . . 0 hm6A_associated_SNPs_16804 0 0 1 3 2949247 2949268 mRNA hsa-miR-186 FLYWCH2 miRanda miRanda
14034 chr16 2949248 2949248 1 + T A rs7281 2949250 + 2949230 2949270 41 TGGGTGAATCTTTGCTTTTAACATTGTGTGATTTCTTTTCT TGGGTGAATCTTTGCTTTAAACATTGTGTGATTTCTTTTCT < 41bp 1 0.219454995195491 1 0.291603684425354 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 FLYWCH2 ENSG00000162076 UTR3 Human protein_coding chr16:2949250 chr16:2949248 . . 0 hm6A_associated_SNPs_16804 0 0 1 3 2949240 2949261 mRNA hsa-miR-377 FLYWCH2 miRanda miRanda
14034 chr16 2949248 2949248 1 + T A rs7281 2949250 + 2949230 2949270 41 TGGGTGAATCTTTGCTTTTAACATTGTGTGATTTCTTTTCT TGGGTGAATCTTTGCTTTAAACATTGTGTGATTTCTTTTCT < 41bp 1 0.219454995195491 1 0.291603684425354 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 FLYWCH2 ENSG00000162076 UTR3 Human protein_coding chr16:2949250 chr16:2949248 . . 0 hm6A_associated_SNPs_16804 0 0 1 3 2949240 2949262 mRNA hsa-miR-342-3p FLYWCH2 miRanda miRanda
14034 chr16 2999608 2999608 1 + C A rs538191771 2999622 + 2999602 2999642 41 GCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCG GCAGAGACTCCTCCTTACTAACAAGGACCTGTCCGCAGCCG < 41bp 1 0.560562233121352 1 0.91155993938446 experiment 0.878875533757296 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 FLYWCH1 ENSG00000262482 ncRNA_intronic Human antisense chr16:2999622 chr16:2999608 . . 0 hm6A_associated_SNPs_16810 0 0 1 2 2999591 2999614 mRNA hsa-miR-28-5p FLYWCH1 miRanda miRanda
14034 chr16 2999608 2999608 1 + C A rs538191771 2999622 + 2999602 2999642 41 GCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCG GCAGAGACTCCTCCTTACTAACAAGGACCTGTCCGCAGCCG < 41bp 1 0.560562233121352 1 0.91155993938446 experiment 0.878875533757296 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 FLYWCH1 ENSG00000262482 ncRNA_intronic Human antisense chr16:2999622 chr16:2999608 . . 0 hm6A_associated_SNPs_16810 0 0 1 2 2999590 2999614 mRNA hsa-miR-708 FLYWCH1 miRanda miRanda
14034 chr16 2999613 2999613 1 + T C rs143750803 2999622 + 2999602 2999642 41 GCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCG GCAGAGCCTCCCCCTTACTAACAAGGACCTGTCCGCAGCCG < 41bp 1 0.578116225067469 1 0.865274846553802 experiment 0.843767549865062 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 12 FLYWCH1 ENSG00000262482 ncRNA_intronic Human antisense chr16:2999622 chr16:2999613 . . 0 hm6A_associated_SNPs_16811 0 0 1 2 2999591 2999614 mRNA hsa-miR-28-5p FLYWCH1 miRanda miRanda
14034 chr16 2999613 2999613 1 + T C rs143750803 2999622 + 2999602 2999642 41 GCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCG GCAGAGCCTCCCCCTTACTAACAAGGACCTGTCCGCAGCCG < 41bp 1 0.578116225067469 1 0.865274846553802 experiment 0.843767549865062 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 12 FLYWCH1 ENSG00000262482 ncRNA_intronic Human antisense chr16:2999622 chr16:2999613 . . 0 hm6A_associated_SNPs_16811 0 0 1 2 2999590 2999614 mRNA hsa-miR-708 FLYWCH1 miRanda miRanda
14034 chr16 3022530 3022530 1 + C T rs115619502 3022537 + 3022517 3022557 41 GCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCG GCAGCTGCTTCTTTCAGGAAACTGACACAGGGAGCTCAGCG < 41bp 1 0.477629842711883 1 0.793269515037537 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022537 chr16:3022530 . . 0 hm6A_associated_SNPs_16824 0 0 1 1 3022522 3022543 mRNA hsa-miR-223 PAQR4 miRanda miRanda
14034 chr16 3022530 3022530 1 + C T rs115619502 3022541 + 3022521 3022561 41 CTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCT CTGCTTCTTTCAGGAAACTGACACAGGGAGCTCAGCGGCCT < 41bp 1 0.538986893648118 1 0.75868821144104 experiment 0.922026212703765 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022541 chr16:3022530 . . 0 hm6A_associated_SNPs_16825 0 0 1 1 3022522 3022543 mRNA hsa-miR-223 PAQR4 miRanda miRanda
14034 chr16 3022765 3022765 1 + A G rs4149807 3022753 + 3022733 3022773 41 TCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAAA TCAGCCTCAGGGGCGTTAAGACCCTGGATGACGTCAATAAA < 41bp 1 0.57277542647321 1 0.722604870796204 experiment 0.854449147053581 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022753 chr16:3022765 . . 0 hm6A_associated_SNPs_16829 0 0 1 2 3022756 3022778 mRNA hsa-miR-204 PAQR4 miRanda miRanda
14034 chr16 3022765 3022765 1 + A G rs4149807 3022753 + 3022733 3022773 41 TCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAAA TCAGCCTCAGGGGCGTTAAGACCCTGGATGACGTCAATAAA < 41bp 1 0.57277542647321 1 0.722604870796204 experiment 0.854449147053581 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022753 chr16:3022765 . . 0 hm6A_associated_SNPs_16829 0 0 1 2 3022757 3022778 mRNA hsa-miR-211 PAQR4 miRanda miRanda
14034 chr16 3022765 3022765 1 + A G rs4149807 3022763 + 3022743 3022783 41 GGGCGTTAAGACCCTGGATGACATCAATAAAGGGACAGGAA GGGCGTTAAGACCCTGGATGACGTCAATAAAGGGACAGGAA Direct Loss 1 0.585651956612677 1 0.869548201560974 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022763 chr16:3022765 . . 0 hm6A_associated_SNPs_16830 0 0 1 2 3022756 3022778 mRNA hsa-miR-204 PAQR4 miRanda miRanda
14034 chr16 3022765 3022765 1 + A G rs4149807 3022763 + 3022743 3022783 41 GGGCGTTAAGACCCTGGATGACATCAATAAAGGGACAGGAA GGGCGTTAAGACCCTGGATGACGTCAATAAAGGGACAGGAA Direct Loss 1 0.585651956612677 1 0.869548201560974 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022763 chr16:3022765 . . 0 hm6A_associated_SNPs_16830 0 0 1 2 3022757 3022778 mRNA hsa-miR-211 PAQR4 miRanda miRanda
14034 chr16 3022765 3022765 1 + A G rs4149807 3022777 + 3022757 3022797 41 TGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCA TGGATGACGTCAATAAAGGGACAGGAAGGGCCATGTTGCCA < 41bp 1 0.73414815510277 1 0.865960001945496 experiment 0.53170368979446 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022777 chr16:3022765 . . 0 hm6A_associated_SNPs_16831 0 0 1 2 3022756 3022778 mRNA hsa-miR-204 PAQR4 miRanda miRanda
14034 chr16 3022765 3022765 1 + A G rs4149807 3022777 + 3022757 3022797 41 TGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCA TGGATGACGTCAATAAAGGGACAGGAAGGGCCATGTTGCCA < 41bp 1 0.73414815510277 1 0.865960001945496 experiment 0.53170368979446 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022777 chr16:3022765 . . 0 hm6A_associated_SNPs_16831 0 0 1 2 3022757 3022778 mRNA hsa-miR-211 PAQR4 miRanda miRanda
14034 chr16 3022847 3022847 1 + C G rs372084213 3022844 + 3022824 3022864 41 GTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGAC GTTCAAATACTTTTTATTAGACAGGGCCAGGCAGAGAAGAC < 41bp 1 0.567247739493733 1 0.252545356750488 experiment 0.865504521012533 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 PAQR4;PKMYT1 ENSG00000127564;ENSG00000162073 UTR3 Human other chr16:3022844 chr16:3022847 . . 0 hm6A_associated_SNPs_16833 0 0 1 2 3022828 3022849 mRNA hsa-miR-187 PAQR4 miRanda miRanda
14034 chr16 3022847 3022847 1 + C G rs372084213 3022844 + 3022824 3022864 41 GTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGAC GTTCAAATACTTTTTATTAGACAGGGCCAGGCAGAGAAGAC < 41bp 1 0.567247739493733 1 0.252545356750488 experiment 0.865504521012533 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 PAQR4;PKMYT1 ENSG00000127564;ENSG00000162073 UTR3 Human other chr16:3022844 chr16:3022847 . . 0 hm6A_associated_SNPs_16833 0 0 1 2 3022846 3022868 mRNA hsa-miR-135b PAQR4 miRanda miRanda
14034 chr16 3022847 3022847 1 + C G rs372084213 3022863 + 3022843 3022883 41 GACACGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGGGG GACAGGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGGGG < 41bp 1 0.337476330820518 1 0.333842158317566 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 PAQR4;PKMYT1 ENSG00000127564;ENSG00000162073 UTR3 Human other chr16:3022863 chr16:3022847 . . 0 hm6A_associated_SNPs_16834 0 0 1 2 3022828 3022849 mRNA hsa-miR-187 PAQR4 miRanda miRanda
14034 chr16 3022847 3022847 1 + C G rs372084213 3022863 + 3022843 3022883 41 GACACGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGGGG GACAGGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGGGG < 41bp 1 0.337476330820518 1 0.333842158317566 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 PAQR4;PKMYT1 ENSG00000127564;ENSG00000162073 UTR3 Human other chr16:3022863 chr16:3022847 . . 0 hm6A_associated_SNPs_16834 0 0 1 2 3022846 3022868 mRNA hsa-miR-135b PAQR4 miRanda miRanda
14034 chr16 3022857 3022857 1 + G A rs529260292 3022844 + 3022824 3022864 41 GTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGAC GTTCAAATACTTTTTATTAGACACGGCCAGGCAAAGAAGAC < 41bp 1 0.509083529241335 1 0.485238283872604 experiment 0.981832941517331 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 PAQR4;PKMYT1 ENSG00000127564;ENSG00000162073 UTR3 Human other chr16:3022844 chr16:3022857 . . 0 hm6A_associated_SNPs_16835 0 0 0 1 3022846 3022868 mRNA hsa-miR-135b PAQR4 miRanda miRanda
14034 chr16 3022857 3022857 1 + G A rs529260292 3022863 + 3022843 3022883 41 GACACGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGGGG GACACGGCCAGGCAAAGAAGACCATGGGAGTTCCCGAGGGG < 41bp 1 0.333028087358149 1 0.53678959608078 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 PAQR4;PKMYT1 ENSG00000127564;ENSG00000162073 UTR3 Human other chr16:3022863 chr16:3022857 . . 0 hm6A_associated_SNPs_16836 0 0 0 1 3022846 3022868 mRNA hsa-miR-135b PAQR4 miRanda miRanda
14034 chr16 3191816 3191816 1 + T C rs377083396 3191822 + 3191802 3191842 41 GCCCCCCAGGGGGCTGCTGGACTTTGGGAGAGACAGCCCAC GCCCCCCAGGGGGCCGCTGGACTTTGGGAGAGACAGCCCAC < 41bp 1 0.670747712587631 1 0.976948797702789 experiment 0.658504574824739 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 15 ZNF213 ENSG00000085644 UTR3 Human protein_coding chr16:3191822 chr16:3191816 . . 0 hm6A_associated_SNPs_16847 0 0 0 1 3191810 3191832 mRNA hsa-miR-150 ZNF213 miRanda miRanda
14034 chr16 3191816 3191816 1 + T C rs377083396 3191834 + 3191814 3191854 41 GCTGCTGGACTTTGGGAGAGACAGCCCACACCTGTGGGACC GCCGCTGGACTTTGGGAGAGACAGCCCACACCTGTGGGACC < 41bp 1 0.410871005389812 1 0.839724659919739 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF213 ENSG00000085644 UTR3 Human protein_coding chr16:3191834 chr16:3191816 . . 0 hm6A_associated_SNPs_16848 0 0 0 1 3191810 3191832 mRNA hsa-miR-150 ZNF213 miRanda miRanda
14034 chr16 3314534 3314534 1 + C T rs148968890 3314514 + 3314494 3314534 41 CACGCATGCACATGCGCGGAACACTCCCAGAAACACATCTC CACGCATGCACATGCGCGGAACACTCCCAGAAACACATCTT < 41bp 1 0.0548961666948026 1 0.989044308662415 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 LINC00921 ENSG00000006194 intronic Human protein_coding chr16:3314514 chr16:3314534 . . 0 hm6A_associated_SNPs_16853 0 0 0 2 3314522 3314541 lncRNA hsa-miR-326 LINC00921 miRanda starBase2
14034 chr16 3314534 3314534 1 + C T rs148968890 3314514 + 3314494 3314534 41 CACGCATGCACATGCGCGGAACACTCCCAGAAACACATCTC CACGCATGCACATGCGCGGAACACTCCCAGAAACACATCTT < 41bp 1 0.0548961666948026 1 0.989044308662415 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 LINC00921 ENSG00000006194 intronic Human protein_coding chr16:3314514 chr16:3314534 . . 0 hm6A_associated_SNPs_16853 0 0 0 2 3314519 3314541 lncRNA hsa-miR-330-5p LINC00921 miRanda starBase2
14034 chr16 3459094 3459094 1 + C T rs57170601 3459105 + 3459085 3459125 41 GGGCCCAACCGTGCATGATGACAGGGTGAAGAGAAGGCAGG GGGCCCAACTGTGCATGATGACAGGGTGAAGAGAAGGCAGG < 41bp 1 0.558019241414579 1 0.976395130157471 experiment 0.883961517170842 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF174 ENSG00000103343 UTR3 Human protein_coding chr16:3459105 chr16:3459094 . . 0 hm6A_associated_SNPs_16873 0 0 1 3 3459088 3459112 mRNA hsa-miR-10a ZNF174 miRanda miRanda
14034 chr16 3459094 3459094 1 + C T rs57170601 3459105 + 3459085 3459125 41 GGGCCCAACCGTGCATGATGACAGGGTGAAGAGAAGGCAGG GGGCCCAACTGTGCATGATGACAGGGTGAAGAGAAGGCAGG < 41bp 1 0.558019241414579 1 0.976395130157471 experiment 0.883961517170842 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF174 ENSG00000103343 UTR3 Human protein_coding chr16:3459105 chr16:3459094 . . 0 hm6A_associated_SNPs_16873 0 0 1 3 3459090 3459112 mRNA hsa-miR-10b ZNF174 miRanda miRanda
14034 chr16 3459094 3459094 1 + C T rs57170601 3459105 + 3459085 3459125 41 GGGCCCAACCGTGCATGATGACAGGGTGAAGAGAAGGCAGG GGGCCCAACTGTGCATGATGACAGGGTGAAGAGAAGGCAGG < 41bp 1 0.558019241414579 1 0.976395130157471 experiment 0.883961517170842 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF174 ENSG00000103343 UTR3 Human protein_coding chr16:3459105 chr16:3459094 . . 0 hm6A_associated_SNPs_16873 0 0 1 3 3459089 3459111 mRNA hsa-miR-339-5p ZNF174 miRanda miRanda
14034 chr16 3526287 3526287 1 + C T rs543443643 3526298 + 3526278 3526318 41 CCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTG CCTCTGCCATGATGACATAGACACTGTGAAGCACCTGTGTG < 41bp 1 0.769608568937875 1 0.771920323371887 experiment 0.46078286212425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 NAA60 ENSG00000122390;ENSG00000262621 CDS Human other chr16:3526298 chr16:3526287 synonymous SNV . 0 hm6A_associated_SNPs_16875 0 0 1 3 3526287 3526307 mRNA hsa-miR-27a NAT15 miRanda miRanda
14034 chr16 3526287 3526287 1 + C T rs543443643 3526298 + 3526278 3526318 41 CCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTG CCTCTGCCATGATGACATAGACACTGTGAAGCACCTGTGTG < 41bp 1 0.769608568937875 1 0.771920323371887 experiment 0.46078286212425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 NAA60 ENSG00000122390;ENSG00000262621 CDS Human other chr16:3526298 chr16:3526287 synonymous SNV . 0 hm6A_associated_SNPs_16875 0 0 1 3 3526287 3526307 mRNA hsa-miR-27b NAT15 miRanda miRanda
14034 chr16 3526287 3526287 1 + C T rs543443643 3526298 + 3526278 3526318 41 CCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTG CCTCTGCCATGATGACATAGACACTGTGAAGCACCTGTGTG < 41bp 1 0.769608568937875 1 0.771920323371887 experiment 0.46078286212425 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 NAA60 ENSG00000122390;ENSG00000262621 CDS Human other chr16:3526298 chr16:3526287 synonymous SNV . 0 hm6A_associated_SNPs_16875 0 0 1 3 3526285 3526306 mRNA hsa-miR-128 NAT15 miRanda miRanda
14034 chr16 4930839 4930839 1 + C T rs150789348 4930838 + 4930818 4930858 41 AATGCATTGGATAGAAGGGGACTGTTCTTCACACATCATAT AATGCATTGGATAGAAGGGGATTGTTCTTCACACATCATAT Direct Loss 1 0.79041807611242 1 0.395538747310638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 UBN1 ENSG00000118900 UTR3 Human protein_coding chr16:4930838 chr16:4930839 . . 0 hm6A_associated_SNPs_16917 0 0 1 3 4930824 4930844 mRNA hsa-miR-212 UBN1 miRanda miRanda
14034 chr16 4930839 4930839 1 + C T rs150789348 4930838 + 4930818 4930858 41 AATGCATTGGATAGAAGGGGACTGTTCTTCACACATCATAT AATGCATTGGATAGAAGGGGATTGTTCTTCACACATCATAT Direct Loss 1 0.79041807611242 1 0.395538747310638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 UBN1 ENSG00000118900 UTR3 Human protein_coding chr16:4930838 chr16:4930839 . . 0 hm6A_associated_SNPs_16917 0 0 1 3 4930823 4930844 mRNA hsa-miR-132 UBN1 miRanda miRanda
14034 chr16 4930839 4930839 1 + C T rs150789348 4930838 + 4930818 4930858 41 AATGCATTGGATAGAAGGGGACTGTTCTTCACACATCATAT AATGCATTGGATAGAAGGGGATTGTTCTTCACACATCATAT Direct Loss 1 0.79041807611242 1 0.395538747310638 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 UBN1 ENSG00000118900 UTR3 Human protein_coding chr16:4930838 chr16:4930839 . . 0 hm6A_associated_SNPs_16917 0 0 1 3 4930830 4930853 mRNA hsa-miR-653 UBN1 miRanda miRanda
14034 chr16 8906897 8906897 1 + C A rs201440361 8906887 + 8906867 8906907 41 TGTCTTTCCTGATGGATGGGACAAGAGATACTGTCTGCGAC TGTCTTTCCTGATGGATGGGACAAGAGATAATGTCTGCGAC < 41bp 1 0.707993854330881 1 0.893017113208771 experiment 0.584012291338238 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 PMM2 ENSG00000140650 CDS Human protein_coding chr16:8906887 chr16:8906897 stopgain 0.781 1 hm6A_associated_SNPs_16926 0 0 1 1 8906882 8906901 mRNA hsa-miR-144 PMM2 miRanda miRanda
14034 chr16 8941840 8941840 1 + G A rs534113793 8941847 + 8941827 8941867 41 TTCCACCTCCAGTGCCAGAAACTTCCAGAAGGAAGGAGAAA TTCCACCTCCAGTACCAGAAACTTCCAGAAGGAAGGAGAAA < 41bp 1 0.775845056393872 1 0.942288160324097 experiment 0.448309887212256 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 14 PMM2 ENSG00000260350 ncRNA_exonic Human antisense chr16:8941847 chr16:8941840 . . 0 hm6A_associated_SNPs_16927 0 0 1 2 8941825 8941845 mRNA hsa-miR-378 PMM2 miRanda miRanda
14034 chr16 8941840 8941840 1 + G A rs534113793 8941847 + 8941827 8941867 41 TTCCACCTCCAGTGCCAGAAACTTCCAGAAGGAAGGAGAAA TTCCACCTCCAGTACCAGAAACTTCCAGAAGGAAGGAGAAA < 41bp 1 0.775845056393872 1 0.942288160324097 experiment 0.448309887212256 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 14 PMM2 ENSG00000260350 ncRNA_exonic Human antisense chr16:8941847 chr16:8941840 . . 0 hm6A_associated_SNPs_16927 0 0 1 2 8941824 8941845 mRNA hsa-miR-422a PMM2 miRanda miRanda
14034 chr16 8942745 8942745 1 + C T rs539046271 8942754 + 8942734 8942774 41 TTCTGCACGTTCTTCGTGAAACTGGAAGGATCCCGGGTCTC TTCTGCACGTTTTTCGTGAAACTGGAAGGATCCCGGGTCTC < 41bp 1 0.430938785565053 1 0.885971188545227 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8942754 chr16:8942745 . . 0 hm6A_associated_SNPs_16939 1 0 1 2 8942738 8942760 mRNA hsa-miR-145 PMM2 miRanda miRanda
14034 chr16 8942745 8942745 1 + C T rs539046271 8942754 + 8942734 8942774 41 TTCTGCACGTTCTTCGTGAAACTGGAAGGATCCCGGGTCTC TTCTGCACGTTTTTCGTGAAACTGGAAGGATCCCGGGTCTC < 41bp 1 0.430938785565053 1 0.885971188545227 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8942754 chr16:8942745 . . 0 hm6A_associated_SNPs_16939 1 0 1 2 8942738 8942760 mRNA hsa-miR-145 LOC100130283 miRanda miRanda
14034 chr16 8942748 8942748 1 + C A rs548312645 8942754 + 8942734 8942774 41 TTCTGCACGTTCTTCGTGAAACTGGAAGGATCCCGGGTCTC TTCTGCACGTTCTTAGTGAAACTGGAAGGATCCCGGGTCTC < 41bp 1 0.453633721033247 1 0.878335475921631 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8942754 chr16:8942748 . . 0 hm6A_associated_SNPs_16940 0 0 1 2 8942738 8942760 mRNA hsa-miR-145 PMM2 miRanda miRanda
14034 chr16 8942748 8942748 1 + C A rs548312645 8942754 + 8942734 8942774 41 TTCTGCACGTTCTTCGTGAAACTGGAAGGATCCCGGGTCTC TTCTGCACGTTCTTAGTGAAACTGGAAGGATCCCGGGTCTC < 41bp 1 0.453633721033247 1 0.878335475921631 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8942754 chr16:8942748 . . 0 hm6A_associated_SNPs_16940 0 0 1 2 8942738 8942760 mRNA hsa-miR-145 LOC100130283 miRanda miRanda
14034 chr16 9212084 9212084 1 + A G rs74861452 9212098 + 9212078 9212118 41 TATATTATATATCAAGTAGGACAGTGAAAAATGTTTCCTTG TATATTGTATATCAAGTAGGACAGTGAAAAATGTTTCCTTG < 41bp 1 0.653495107397404 1 0.229696244001389 experiment 0.693009785205192 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 7 C16orf72 ENSG00000182831 UTR3 Human protein_coding chr16:9212098 chr16:9212084 . . 0 hm6A_associated_SNPs_16950 0 0 1 2 9212068 9212087 mRNA hsa-miR-374a C16orf72 miRanda miRanda
14034 chr16 9212084 9212084 1 + A G rs74861452 9212098 + 9212078 9212118 41 TATATTATATATCAAGTAGGACAGTGAAAAATGTTTCCTTG TATATTGTATATCAAGTAGGACAGTGAAAAATGTTTCCTTG < 41bp 1 0.653495107397404 1 0.229696244001389 experiment 0.693009785205192 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 7 C16orf72 ENSG00000182831 UTR3 Human protein_coding chr16:9212098 chr16:9212084 . . 0 hm6A_associated_SNPs_16950 0 0 1 2 9212068 9212087 mRNA hsa-miR-374b C16orf72 miRanda miRanda
14034 chr16 9212772 9212772 1 + T C rs191820293 9212752 + 9212732 9212772 41 TCCTCTTTCCACGTTGGATAACAATTTTTTGGTTGTTTTGT TCCTCTTTCCACGTTGGATAACAATTTTTTGGTTGTTTTGC < 41bp 1 0.390904167651376 1 0.146653056144714 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 C16orf72 ENSG00000182831 UTR3 Human protein_coding chr16:9212752 chr16:9212772 . . 0 hm6A_associated_SNPs_16952 0 0 1 3 9212765 9212786 mRNA hsa-miR-29a C16orf72 miRanda miRanda
14034 chr16 9212772 9212772 1 + T C rs191820293 9212752 + 9212732 9212772 41 TCCTCTTTCCACGTTGGATAACAATTTTTTGGTTGTTTTGT TCCTCTTTCCACGTTGGATAACAATTTTTTGGTTGTTTTGC < 41bp 1 0.390904167651376 1 0.146653056144714 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 C16orf72 ENSG00000182831 UTR3 Human protein_coding chr16:9212752 chr16:9212772 . . 0 hm6A_associated_SNPs_16952 0 0 1 3 9212764 9212786 mRNA hsa-miR-29b C16orf72 miRanda miRanda
14034 chr16 9212772 9212772 1 + T C rs191820293 9212752 + 9212732 9212772 41 TCCTCTTTCCACGTTGGATAACAATTTTTTGGTTGTTTTGT TCCTCTTTCCACGTTGGATAACAATTTTTTGGTTGTTTTGC < 41bp 1 0.390904167651376 1 0.146653056144714 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 C16orf72 ENSG00000182831 UTR3 Human protein_coding chr16:9212752 chr16:9212772 . . 0 hm6A_associated_SNPs_16952 0 0 1 3 9212765 9212786 mRNA hsa-miR-29c C16orf72 miRanda miRanda
14034 chr16 11410595 11410595 1 + G A rs559332032 11410598 + 11410578 11410618 41 TCCCAGGCCAGGAATGTGAAACCATTATGCAGATGAAGAAG TCCCAGGCCAGGAATGTAAAACCATTATGCAGATGAAGAAG < 41bp 1 0.191652375083134 1 0.926659345626831 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 18 PRM1;LOC105371083 ENSG00000175643 UTR5 Human protein_coding chr16:11410598 chr16:11410595 . . 0 hm6A_associated_SNPs_16970 0 0 0 2 11410573 11410597 mRNA hsa-miR-23a C16orf75 miRanda miRanda
14034 chr16 11410595 11410595 1 + G A rs559332032 11410598 + 11410578 11410618 41 TCCCAGGCCAGGAATGTGAAACCATTATGCAGATGAAGAAG TCCCAGGCCAGGAATGTAAAACCATTATGCAGATGAAGAAG < 41bp 1 0.191652375083134 1 0.926659345626831 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 18 PRM1;LOC105371083 ENSG00000175643 UTR5 Human protein_coding chr16:11410598 chr16:11410595 . . 0 hm6A_associated_SNPs_16970 0 0 0 2 11410573 11410597 mRNA hsa-miR-23b C16orf75 miRanda miRanda
14034 chr16 11445394 11445394 1 + T A rs193277177 11445390 + 11445370 11445410 41 AGCTAAACTTCCACTTCATAACTTTCGGCGAGACATGGTGA AGCTAAACTTCCACTTCATAACTTACGGCGAGACATGGTGA < 41bp 1 0.704137993687487 1 0.8887659907341 experiment 0.591724012625025 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445390 chr16:11445394 . . 0 hm6A_associated_SNPs_16973 0 0 1 1 11445393 11445418 mRNA hsa-miR-708 C16orf75 miRanda miRanda
14034 chr16 11445394 11445394 1 + T A rs193277177 11445402 + 11445382 11445422 41 ACTTCATAACTTTCGGCGAGACATGGTGAGCCTCCTGGTGT ACTTCATAACTTACGGCGAGACATGGTGAGCCTCCTGGTGT < 41bp 1 0.593053853631299 1 0.669912457466125 experiment 0.813892292737402 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445402 chr16:11445394 . . 0 hm6A_associated_SNPs_16974 0 0 1 1 11445393 11445418 mRNA hsa-miR-708 C16orf75 miRanda miRanda
14034 chr16 11445404 11445404 1 + A G rs1061128 11445390 + 11445370 11445410 41 AGCTAAACTTCCACTTCATAACTTTCGGCGAGACATGGTGA AGCTAAACTTCCACTTCATAACTTTCGGCGAGACGTGGTGA < 41bp 1 0.727851760907743 1 0.918547570705414 experiment 0.544296478184513 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445390 chr16:11445404 . . 0 hm6A_associated_SNPs_16975 0 0 1 3 11445396 11445418 mRNA hsa-miR-28-5p C16orf75 miRanda miRanda
14034 chr16 11445404 11445404 1 + A G rs1061128 11445390 + 11445370 11445410 41 AGCTAAACTTCCACTTCATAACTTTCGGCGAGACATGGTGA AGCTAAACTTCCACTTCATAACTTTCGGCGAGACGTGGTGA < 41bp 1 0.727851760907743 1 0.918547570705414 experiment 0.544296478184513 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445390 chr16:11445404 . . 0 hm6A_associated_SNPs_16975 0 0 1 3 11445403 11445427 mRNA hsa-miR-342-3p C16orf75 miRanda miRanda
14034 chr16 11445404 11445404 1 + A G rs1061128 11445390 + 11445370 11445410 41 AGCTAAACTTCCACTTCATAACTTTCGGCGAGACATGGTGA AGCTAAACTTCCACTTCATAACTTTCGGCGAGACGTGGTGA < 41bp 1 0.727851760907743 1 0.918547570705414 experiment 0.544296478184513 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445390 chr16:11445404 . . 0 hm6A_associated_SNPs_16975 0 0 1 3 11445393 11445418 mRNA hsa-miR-708 C16orf75 miRanda miRanda
14034 chr16 11445404 11445404 1 + A G rs1061128 11445402 + 11445382 11445422 41 ACTTCATAACTTTCGGCGAGACATGGTGAGCCTCCTGGTGT ACTTCATAACTTTCGGCGAGACGTGGTGAGCCTCCTGGTGT Direct Loss 1 0.511115160486126 1 0.742863655090332 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445402 chr16:11445404 . . 0 hm6A_associated_SNPs_16976 0 0 1 3 11445396 11445418 mRNA hsa-miR-28-5p C16orf75 miRanda miRanda
14034 chr16 11445404 11445404 1 + A G rs1061128 11445402 + 11445382 11445422 41 ACTTCATAACTTTCGGCGAGACATGGTGAGCCTCCTGGTGT ACTTCATAACTTTCGGCGAGACGTGGTGAGCCTCCTGGTGT Direct Loss 1 0.511115160486126 1 0.742863655090332 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445402 chr16:11445404 . . 0 hm6A_associated_SNPs_16976 0 0 1 3 11445403 11445427 mRNA hsa-miR-342-3p C16orf75 miRanda miRanda
14034 chr16 11445404 11445404 1 + A G rs1061128 11445402 + 11445382 11445422 41 ACTTCATAACTTTCGGCGAGACATGGTGAGCCTCCTGGTGT ACTTCATAACTTTCGGCGAGACGTGGTGAGCCTCCTGGTGT Direct Loss 1 0.511115160486126 1 0.742863655090332 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445402 chr16:11445404 . . 0 hm6A_associated_SNPs_16976 0 0 1 3 11445393 11445418 mRNA hsa-miR-708 C16orf75 miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770501 + 11770481 11770521 41 CTACTGTAATGCGTGAACTAACAAACCTGTGAACTGTAAAT CTACTGTAATGCGTGAGCTAACAAACCTGTGAACTGTAAAT < 41bp 1 0.796928746719402 1 0.949900984764099 experiment 0.406142506561197 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770501 chr16:11770497 . . 0 hm6A_associated_SNPs_16978 0 0 1 3 11770492 11770513 mRNA hsa-miR-27a SNN miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770501 + 11770481 11770521 41 CTACTGTAATGCGTGAACTAACAAACCTGTGAACTGTAAAT CTACTGTAATGCGTGAGCTAACAAACCTGTGAACTGTAAAT < 41bp 1 0.796928746719402 1 0.949900984764099 experiment 0.406142506561197 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770501 chr16:11770497 . . 0 hm6A_associated_SNPs_16978 0 0 1 3 11770492 11770513 mRNA hsa-miR-27b SNN miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770501 + 11770481 11770521 41 CTACTGTAATGCGTGAACTAACAAACCTGTGAACTGTAAAT CTACTGTAATGCGTGAGCTAACAAACCTGTGAACTGTAAAT < 41bp 1 0.796928746719402 1 0.949900984764099 experiment 0.406142506561197 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 17 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770501 chr16:11770497 . . 0 hm6A_associated_SNPs_16978 0 0 1 3 11770493 11770518 mRNA hsa-miR-181d SNN miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770505 + 11770485 11770525 41 TGTAATGCGTGAACTAACAAACCTGTGAACTGTAAATAGGC TGTAATGCGTGAGCTAACAAACCTGTGAACTGTAAATAGGC < 41bp 1 0.665583236151248 1 0.964727878570557 experiment 0.668833527697503 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770505 chr16:11770497 . . 0 hm6A_associated_SNPs_16979 0 0 1 3 11770492 11770513 mRNA hsa-miR-27a SNN miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770505 + 11770485 11770525 41 TGTAATGCGTGAACTAACAAACCTGTGAACTGTAAATAGGC TGTAATGCGTGAGCTAACAAACCTGTGAACTGTAAATAGGC < 41bp 1 0.665583236151248 1 0.964727878570557 experiment 0.668833527697503 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770505 chr16:11770497 . . 0 hm6A_associated_SNPs_16979 0 0 1 3 11770492 11770513 mRNA hsa-miR-27b SNN miRanda miRanda
14034 chr16 11770497 11770497 1 + A G rs143114083 11770505 + 11770485 11770525 41 TGTAATGCGTGAACTAACAAACCTGTGAACTGTAAATAGGC TGTAATGCGTGAGCTAACAAACCTGTGAACTGTAAATAGGC < 41bp 1 0.665583236151248 1 0.964727878570557 experiment 0.668833527697503 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770505 chr16:11770497 . . 0 hm6A_associated_SNPs_16979 0 0 1 3 11770493 11770518 mRNA hsa-miR-181d SNN miRanda miRanda
14034 chr16 14042930 14042930 1 + G A rs2276464 14042918 + 14042898 14042938 41 TCAAGACAGTCTCCTCAAAAACTGGTTGACTAGTCTTCTAA TCAAGACAGTCTCCTCAAAAACTGGTTGACTAATCTTCTAA < 41bp 1 0.167784197244076 1 0.614730000495911 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 ERCC4 ENSG00000175595 UTR3 Human protein_coding chr16:14042918 chr16:14042930 . . 0 hm6A_associated_SNPs_17003 0 0 1 1 14042920 14042942 mRNA hsa-miR-376a ERCC4 miRanda miRanda
14034 chr16 14042930 14042930 1 + G A rs2276464 14042947 + 14042927 14042967 41 CTAGTCTTCTAATGACCCTAACATATGTAGCATATACTATA CTAATCTTCTAATGACCCTAACATATGTAGCATATACTATA < 41bp 1 0.148323112666038 1 0.239408373832703 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 ERCC4 ENSG00000175595 UTR3 Human protein_coding chr16:14042947 chr16:14042930 . . 0 hm6A_associated_SNPs_17004 0 0 1 1 14042920 14042942 mRNA hsa-miR-376a ERCC4 miRanda miRanda
14034 chr16 14761969 14761969 1 + G A rs79345307 14761979 + 14761959 14761999 41 AGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACA AGTCCCCAACAGCTGGCAAGACTCAGGGTCCTCAGTGGACA < 41bp 1 0.736185326647873 1 0.922719478607178 experiment 0.527629346704254 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 BFAR ENSG00000103429 UTR3 Human protein_coding chr16:14761979 chr16:14761969 . . 0 hm6A_associated_SNPs_17012 0 0 1 1 14761966 14761989 mRNA hsa-miR-504 BFAR miRanda miRanda
14034 chr16 15131228 15131228 1 + T G rs74605400 15131239 + 15131219 15131259 41 AATTCACACTGGGTTTCTGGACTGTAGTATTGGAAGCCTTA AATTCACACGGGGTTTCTGGACTGTAGTATTGGAAGCCTTA < 41bp 1 0.570450083317995 1 0.977473855018616 experiment 0.859099833364011 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PDXDC1 ENSG00000179889 UTR3 Human protein_coding chr16:15131239 chr16:15131228 . . 0 hm6A_associated_SNPs_17016 0 0 1 3 15131210 15131231 mRNA hsa-miR-199a-5p PDXDC1 miRanda miRanda
14034 chr16 15131228 15131228 1 + T G rs74605400 15131239 + 15131219 15131259 41 AATTCACACTGGGTTTCTGGACTGTAGTATTGGAAGCCTTA AATTCACACGGGGTTTCTGGACTGTAGTATTGGAAGCCTTA < 41bp 1 0.570450083317995 1 0.977473855018616 experiment 0.859099833364011 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PDXDC1 ENSG00000179889 UTR3 Human protein_coding chr16:15131239 chr16:15131228 . . 0 hm6A_associated_SNPs_17016 0 0 1 3 15131225 15131246 mRNA hsa-miR-139-5p PDXDC1 miRanda miRanda
14034 chr16 15131228 15131228 1 + T G rs74605400 15131239 + 15131219 15131259 41 AATTCACACTGGGTTTCTGGACTGTAGTATTGGAAGCCTTA AATTCACACGGGGTTTCTGGACTGTAGTATTGGAAGCCTTA < 41bp 1 0.570450083317995 1 0.977473855018616 experiment 0.859099833364011 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 PDXDC1 ENSG00000179889 UTR3 Human protein_coding chr16:15131239 chr16:15131228 . . 0 hm6A_associated_SNPs_17016 0 0 1 3 15131210 15131231 mRNA hsa-miR-199b-5p PDXDC1 miRanda miRanda
14034 chr16 15682004 15682004 1 + C G rs8053234 15682009 + 15681989 15682029 41 TGTGCATTTTTTCATCGTTGACATCATATTGTGGTATCATT TGTGCATTTTTTCATGGTTGACATCATATTGTGGTATCATT < 41bp 1 0.125463516797667 1 0.683822274208069 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 C16orf45 ENSG00000166780 UTR3 Human protein_coding chr16:15682009 chr16:15682004 . . 0 hm6A_associated_SNPs_17017 0 0 1 1 15681990 15682011 mRNA hsa-miR-505 C16orf45 miRanda miRanda
14034 chr16 16235509 16235509 1 + A G rs142450363 16235505 + 16235485 16235525 41 TTGTATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCCT TTGTATAGAAGATCCTAGTGACCAGATTCAGCCTACTGCCT < 41bp 1 0.571950757943188 1 0.974059343338013 experiment 0.856098484113623 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 25 ABCC1 ENSG00000103222 UTR3 Human protein_coding chr16:16235505 chr16:16235509 . . 0 hm6A_associated_SNPs_17034 0 0 1 1 16235487 16235510 mRNA hsa-miR-96 ABCC1 miRanda miRanda
14034 chr16 20935813 20935813 1 + C T rs74247284 20935812 + 20935792 20935832 41 GTTACTGTGGCTACTATAAAACTATGTACCACTCTCAGAAT GTTACTGTGGCTACTATAAAATTATGTACCACTCTCAGAAT Direct Loss 1 0.295707677374253 1 0.359687805175781 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 22 LYRM1 ENSG00000102897 UTR3 Human protein_coding chr16:20935812 chr16:20935813 . . 0 hm6A_associated_SNPs_17060 0 0 1 1 20935799 20935819 mRNA hsa-miR-376c LYRM1 miRanda miRanda
14034 chr16 21667076 21667076 1 + G T rs557107106 21667065 + 21667045 21667085 41 CAGTAGGGACTCATTCCCAGACAAAGCAATAGTCACGACTT CAGTAGGGACTCATTCCCAGACAAAGCAATATTCACGACTT < 41bp 1 0.667360268153317 1 0.970703423023224 experiment 0.665279463693366 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 METTL9 ENSG00000197006 UTR3 Human protein_coding chr16:21667065 chr16:21667076 . . 0 hm6A_associated_SNPs_17063 0 0 1 1 21667054 21667076 mRNA hsa-miR-137 METTL9 miRanda miRanda
14034 chr16 23582236 23582236 1 + T C rs191957057 23582238 + 23582218 23582258 41 TAGATCTGCCAATTATGTTGACAAGGGAATGATCAAAAGCT TAGATCTGCCAATTATGTCGACAAGGGAATGATCAAAAGCT Direct Loss 1 0.675070568484447 1 0.792353630065918 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 UBFD1 ENSG00000103353 UTR3 Human protein_coding chr16:23582238 chr16:23582236 . . 0 hm6A_associated_SNPs_17072 0 0 1 1 23582216 23582240 mRNA hsa-miR-505 UBFD1 miRanda miRanda
14034 chr16 23678962 23678962 1 + A G rs371491502 23678973 + 23678953 23678993 41 TCTTGGGAAAGGTGTTTGTGACTTTTCAGAGCCCAGATTCC TCTTGGGAAGGGTGTTTGTGACTTTTCAGAGCCCAGATTCC < 41bp 1 0.682217208857823 1 0.0315375030040741 experiment 0.635565582284354 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 DCTN5 ENSG00000166847 UTR3 Human protein_coding chr16:23678973 chr16:23678962 . . 0 hm6A_associated_SNPs_17075 0 0 1 1 23678955 23678977 mRNA hsa-miR-224 DCTN5 miRanda miRanda
14034 chr16 23678970 23678970 1 + G A rs566517733 23678973 + 23678953 23678993 41 TCTTGGGAAAGGTGTTTGTGACTTTTCAGAGCCCAGATTCC TCTTGGGAAAGGTGTTTATGACTTTTCAGAGCCCAGATTCC < 41bp 1 0.708797167250106 1 0.0541523993015289 experiment 0.582405665499788 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 DCTN5 ENSG00000166847 UTR3 Human protein_coding chr16:23678973 chr16:23678970 . . 0 hm6A_associated_SNPs_17076 0 0 1 1 23678955 23678977 mRNA hsa-miR-224 DCTN5 miRanda miRanda
14034 chr16 23701622 23701622 1 + A G rs114601938 23701642 + 23701622 23701662 41 ATATTTCTATTGAATTCGGAACTGTCCTTTCCTTGGCTTTA GTATTTCTATTGAATTCGGAACTGTCCTTTCCTTGGCTTTA < 41bp 1 0.199465929225838 1 0.835573673248291 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PLK1 ENSG00000166851 UTR3 Human protein_coding chr16:23701642 chr16:23701622 . . 0 hm6A_associated_SNPs_17087 0 0 1 1 23701601 23701622 mRNA hsa-miR-486-5p PLK1 miRanda miRanda
14034 chr16 24835944 24835944 1 + T C rs193262905 24835950 + 24835930 24835970 41 ATTTAAAAAAAATGTAAAAGACAAAAAAAAAATGGAGGATG ATTTAAAAAAAATGCAAAAGACAAAAAAAAAATGGAGGATG < 41bp 1 0.409933762752977 1 0.956177473068237 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 TNRC6A ENSG00000090905 UTR3 Human protein_coding chr16:24835950 chr16:24835944 . . 0 hm6A_associated_SNPs_17090 0 0 1 1 24835937 24835957 mRNA hsa-miR-129-5p TNRC6A miRanda miRanda
14034 chr16 24837140 24837140 1 + A G rs74015711 24837121 + 24837101 24837141 41 TGACAGTGTACTAGTGTTAAACTCTCATACCTCTGTTACAA TGACAGTGTACTAGTGTTAAACTCTCATACCTCTGTTACGA < 41bp 1 0.54504921075419 1 0.95533150434494 experiment 0.90990157849162 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 TNRC6A ENSG00000090905 UTR3 Human protein_coding chr16:24837121 chr16:24837140 . . 0 hm6A_associated_SNPs_17092 0 0 1 1 24837119 24837140 mRNA hsa-miR-194 TNRC6A miRanda miRanda
14034 chr16 28848508 28848508 1 + A G rs58962255 28848490 + 28848470 28848510 41 ACGAGGATGGCTGGACAAGGACTTTTACTTTTTATTACATA ACGAGGATGGCTGGACAAGGACTTTTACTTTTTATTACGTA < 41bp 1 0.512318158967427 1 0.769733369350433 experiment 0.975363682065145 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 39 ATXN2L ENSG00000260570 ncRNA_exonic Human antisense chr16:28848490 chr16:28848508 . . 0 hm6A_associated_SNPs_17120 0 0 1 2 28848489 28848509 mRNA hsa-miR-374a ATXN2L miRanda miRanda
14034 chr16 28848508 28848508 1 + A G rs58962255 28848490 + 28848470 28848510 41 ACGAGGATGGCTGGACAAGGACTTTTACTTTTTATTACATA ACGAGGATGGCTGGACAAGGACTTTTACTTTTTATTACGTA < 41bp 1 0.512318158967427 1 0.769733369350433 experiment 0.975363682065145 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 39 ATXN2L ENSG00000260570 ncRNA_exonic Human antisense chr16:28848490 chr16:28848508 . . 0 hm6A_associated_SNPs_17120 0 0 1 2 28848495 28848516 mRNA hsa-miR-590-3p ATXN2L miRanda miRanda
14034 chr16 29098705 29098705 1 + G A rs201185685 29098719 + 29098699 29098739 41 TTGTTCGAAAATCAGAGAGAACACTGGTAAGAAATCTTTTC TTGTTCAAAAATCAGAGAGAACACTGGTAAGAAATCTTTTC < 41bp 1 0.372866138925868 1 0.0909468829631805 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 RRN3P2 ENSG00000103472 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:29098719 chr16:29098705 . . 0 hm6A_associated_SNPs_17126 0 0 0 1 29098704 29098724 mRNA hsa-miR-199a-5p RRN3P2 miRanda miRanda
14034 chr16 29821868 29821868 1 + G A rs11144 29821885 + 29821865 29821905 41 CATGCCCTGTCTTCCCAGGGACTTGTGAGCCTCTTCCCTCG CATACCCTGTCTTCCCAGGGACTTGTGAGCCTCTTCCCTCG < 41bp 1 0.337251375207796 1 0.881626844406128 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 4 MAZ ENSG00000238045 ncRNA_exonic Human antisense chr16:29821885 chr16:29821868 . . 0 hm6A_associated_SNPs_17142 0 0 1 1 29821859 29821880 mRNA hsa-miR-7 MAZ miRanda miRanda
14034 chr16 29831305 29831305 1 + T A rs559920424 29831289 + 29831269 29831309 41 GTGTGTGTGTTTTCTATTGAACACCTATAGAGAGAGTGTGT GTGTGTGTGTTTTCTATTGAACACCTATAGAGAGAGAGTGT < 41bp 1 0.710220884026054 1 0.623594045639038 experiment 0.579558231947892 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 PAGR1 ENSG00000261690;ENSG00000261962 ncRNA_intronic Human other chr16:29831289 chr16:29831305 . . 0 hm6A_associated_SNPs_17148 0 0 1 1 29831302 29831324 mRNA hsa-miR-376a C16orf53 miRanda miRanda
14034 chr16 29831305 29831305 1 + T A rs559920424 29831324 + 29831304 29831344 41 GTGTGTGTGTTTTCTATTGAACATCTATATAGAGAGAGTGT GAGTGTGTGTTTTCTATTGAACATCTATATAGAGAGAGTGT < 41bp 1 0.753188810532249 1 0.804358601570129 experiment 0.493622378935502 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 PAGR1 ENSG00000261690;ENSG00000261962 ncRNA_intronic Human other chr16:29831324 chr16:29831305 . . 0 hm6A_associated_SNPs_17149 0 0 1 1 29831302 29831324 mRNA hsa-miR-376a C16orf53 miRanda miRanda
14034 chr16 30012758 30012758 1 + A C rs4389160 30012769 + 30012749 30012789 41 CTACCCCCCATTCCCTTCTGACTACCTGGCCCTGCAGCTGC CTACCCCCCCTTCCCTTCTGACTACCTGGCCCTGCAGCTGC < 41bp 1 0.618450913430768 1 0.37279337644577 experiment 0.763098173138463 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 INO80E ENSG00000169592 CDS Human protein_coding chr16:30012769 chr16:30012758 synonymous SNV . 0 hm6A_associated_SNPs_17156 0 0 1 2 30012755 30012776 mRNA hsa-miR-196a INO80E miRanda miRanda
14034 chr16 30012758 30012758 1 + A C rs4389160 30012769 + 30012749 30012789 41 CTACCCCCCATTCCCTTCTGACTACCTGGCCCTGCAGCTGC CTACCCCCCCTTCCCTTCTGACTACCTGGCCCTGCAGCTGC < 41bp 1 0.618450913430768 1 0.37279337644577 experiment 0.763098173138463 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 INO80E ENSG00000169592 CDS Human protein_coding chr16:30012769 chr16:30012758 synonymous SNV . 0 hm6A_associated_SNPs_17156 0 0 1 2 30012755 30012776 mRNA hsa-miR-196b INO80E miRanda miRanda
14034 chr16 31202800 31202800 1 + G A rs80301724 31202785 + 31202765 31202805 41 CTGGCTCCCCAGGTTCTGGAACAGCTTTTTGTCCTGTACCC CTGGCTCCCCAGGTTCTGGAACAGCTTTTTGTCCTATACCC < 41bp 1 0.724922460306619 1 0.024628758430481 experiment 0.550155079386761 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 36 FUS ENSG00000089280 UTR3 Human protein_coding chr16:31202785 chr16:31202800 . . 0 hm6A_associated_SNPs_17215 2 0 1 3 31202796 31202818 mRNA hsa-let-7g FUS miRanda miRanda
14034 chr16 31202800 31202800 1 + G A rs80301724 31202785 + 31202765 31202805 41 CTGGCTCCCCAGGTTCTGGAACAGCTTTTTGTCCTGTACCC CTGGCTCCCCAGGTTCTGGAACAGCTTTTTGTCCTATACCC < 41bp 1 0.724922460306619 1 0.024628758430481 experiment 0.550155079386761 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 36 FUS ENSG00000089280 UTR3 Human protein_coding chr16:31202785 chr16:31202800 . . 0 hm6A_associated_SNPs_17215 2 0 1 3 31202794 31202812 mRNA hsa-miR-141 FUS miRanda miRanda
14034 chr16 31202800 31202800 1 + G A rs80301724 31202785 + 31202765 31202805 41 CTGGCTCCCCAGGTTCTGGAACAGCTTTTTGTCCTGTACCC CTGGCTCCCCAGGTTCTGGAACAGCTTTTTGTCCTATACCC < 41bp 1 0.724922460306619 1 0.024628758430481 experiment 0.550155079386761 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 36 FUS ENSG00000089280 UTR3 Human protein_coding chr16:31202785 chr16:31202800 . . 0 hm6A_associated_SNPs_17215 2 0 1 3 31202793 31202812 mRNA hsa-miR-200a FUS miRanda miRanda
14034 chr16 31927937 31927937 1 + T C rs189851614 31927952 + 31927932 31927972 41 CACAATAGCAGAGAATATAAACTGAAAAAATCCATACAAAT CACAACAGCAGAGAATATAAACTGAAAAAATCCATACAAAT < 41bp 1 0.376384008757124 1 0.993899464607239 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 ZNF267 ENSG00000185947 UTR3 Human protein_coding chr16:31927952 chr16:31927937 . . 0 hm6A_associated_SNPs_17222 0 0 1 1 31927937 31927958 mRNA hsa-miR-223 ZNF267 miRanda miRanda
14034 chr16 47733918 47733918 1 + C A rs117861728 47733911 + 47733891 47733931 41 ATAAATCTGTACCTTATCAAACATTTTCTTTGAGCTCCTGC ATAAATCTGTACCTTATCAAACATTTTATTTGAGCTCCTGC < 41bp 1 0.41698834274957 1 0.00800296664237976 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 PHKB ENSG00000102893 UTR3 Human protein_coding chr16:47733911 chr16:47733918 . . 0 hm6A_associated_SNPs_17231 1 0 1 2 47733909 47733930 mRNA hsa-miR-28-5p PHKB miRanda miRanda
14034 chr16 47733918 47733918 1 + C A rs117861728 47733911 + 47733891 47733931 41 ATAAATCTGTACCTTATCAAACATTTTCTTTGAGCTCCTGC ATAAATCTGTACCTTATCAAACATTTTATTTGAGCTCCTGC < 41bp 1 0.41698834274957 1 0.00800296664237976 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 PHKB ENSG00000102893 UTR3 Human protein_coding chr16:47733911 chr16:47733918 . . 0 hm6A_associated_SNPs_17231 1 0 1 2 47733908 47733930 mRNA hsa-miR-708 PHKB miRanda miRanda
14034 chr16 48386631 48386631 1 + A G rs74017930 48386632 + 48386612 48386652 41 TGAGGGAAGCAGCCCTCAGAACATGATAGCTTGTATCCAGC TGAGGGAAGCAGCCCTCAGGACATGATAGCTTGTATCCAGC < 41bp 1 0.366463402387325 1 0.869288563728333 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 20 MIR5095 ENSG00000102910 UTR3 Human protein_coding chr16:48386632 chr16:48386631 . . 0 hm6A_associated_SNPs_17232 0 0 1 1 48386620 48386642 mRNA hsa-miR-221 LONP2 miRanda miRanda
14034 chr16 50350689 50350689 1 + C T rs535531794 50350678 + 50350658 50350698 41 TAACAACAGGGTGAGAAATGACCAAACTGCCCGTGACTTTT TAACAACAGGGTGAGAAATGACCAAACTGCCTGTGACTTTT < 41bp 1 0.473358270611992 1 0.943330526351929 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350678 chr16:50350689 . . 0 hm6A_associated_SNPs_17245 0 0 1 1 50350677 50350697 mRNA hsa-miR-224 ADCY7 miRanda miRanda
14034 chr16 50350689 50350689 1 + C T rs535531794 50350683 + 50350663 50350703 41 ACAGGGTGAGAAATGACCAAACTGCCCGTGACTTTTTCTGA ACAGGGTGAGAAATGACCAAACTGCCTGTGACTTTTTCTGA < 41bp 1 0.508860274850876 1 0.950306057929993 experiment 0.982279450298247 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350683 chr16:50350689 . . 0 hm6A_associated_SNPs_17246 0 0 1 1 50350677 50350697 mRNA hsa-miR-224 ADCY7 miRanda miRanda
14034 chr16 50350689 50350689 1 + C T rs535531794 50350693 + 50350673 50350713 41 AAATGACCAAACTGCCCGTGACTTTTTCTGAATGGACTTCA AAATGACCAAACTGCCTGTGACTTTTTCTGAATGGACTTCA < 41bp 1 0.750895773053564 1 0.978766798973083 experiment 0.498208453892871 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350693 chr16:50350689 . . 0 hm6A_associated_SNPs_17247 0 0 1 1 50350677 50350697 mRNA hsa-miR-224 ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350896 + 50350876 50350916 41 ACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGT ACAGGGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGT < 41bp 1 0.472064236967523 1 0.833031296730042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350896 chr16:50350883 . . 0 hm6A_associated_SNPs_17248 0 0 1 5 50350862 50350883 mRNA hsa-miR-99a ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350896 + 50350876 50350916 41 ACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGT ACAGGGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGT < 41bp 1 0.472064236967523 1 0.833031296730042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350896 chr16:50350883 . . 0 hm6A_associated_SNPs_17248 0 0 1 5 50350862 50350883 mRNA hsa-miR-100 ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350896 + 50350876 50350916 41 ACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGT ACAGGGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGT < 41bp 1 0.472064236967523 1 0.833031296730042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350896 chr16:50350883 . . 0 hm6A_associated_SNPs_17248 0 0 1 5 50350862 50350883 mRNA hsa-miR-10a ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350896 + 50350876 50350916 41 ACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGT ACAGGGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGT < 41bp 1 0.472064236967523 1 0.833031296730042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350896 chr16:50350883 . . 0 hm6A_associated_SNPs_17248 0 0 1 5 50350862 50350883 mRNA hsa-miR-10b ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350896 + 50350876 50350916 41 ACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGT ACAGGGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGT < 41bp 1 0.472064236967523 1 0.833031296730042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350896 chr16:50350883 . . 0 hm6A_associated_SNPs_17248 0 0 1 5 50350862 50350883 mRNA hsa-miR-99b ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350900 + 50350880 50350920 41 GGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG GGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG < 41bp 1 0.242444309691587 1 0.482819855213165 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 4 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350900 chr16:50350883 . . 0 hm6A_associated_SNPs_17249 0 0 1 5 50350862 50350883 mRNA hsa-miR-99a ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350900 + 50350880 50350920 41 GGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG GGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG < 41bp 1 0.242444309691587 1 0.482819855213165 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 4 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350900 chr16:50350883 . . 0 hm6A_associated_SNPs_17249 0 0 1 5 50350862 50350883 mRNA hsa-miR-100 ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350900 + 50350880 50350920 41 GGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG GGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG < 41bp 1 0.242444309691587 1 0.482819855213165 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 4 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350900 chr16:50350883 . . 0 hm6A_associated_SNPs_17249 0 0 1 5 50350862 50350883 mRNA hsa-miR-10a ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350900 + 50350880 50350920 41 GGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG GGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG < 41bp 1 0.242444309691587 1 0.482819855213165 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 4 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350900 chr16:50350883 . . 0 hm6A_associated_SNPs_17249 0 0 1 5 50350862 50350883 mRNA hsa-miR-10b ADCY7 miRanda miRanda
14034 chr16 50350883 50350883 1 + T G rs1064448 50350900 + 50350880 50350920 41 GGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG GGTGGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTG < 41bp 1 0.242444309691587 1 0.482819855213165 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 4 ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350900 chr16:50350883 . . 0 hm6A_associated_SNPs_17249 0 0 1 5 50350862 50350883 mRNA hsa-miR-99b ADCY7 miRanda miRanda
14034 chr16 53525466 53525466 1 - T A rs7192937 53525452 - 53525432 53525472 41 CAGAACACTATTCTAATTGAACAATGTAAGTTCCATATTTC CAGAACTCTATTCTAATTGAACAATGTAAGTTCCATATTTC < 41bp 1 0.51045469227237 1 0.076232522726059 experiment 0.979090615455261 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 7 AKTIP;RBL2 ENSG00000103479;ENSG00000166971 UTR3 Human other chr16:53525452 chr16:53525466 . . 0 hm6A_associated_SNPs_17264 0 0 1 3 53525444 53525466 mRNA hsa-miR-33a AKTIP miRanda miRanda
14034 chr16 53525466 53525466 1 - T A rs7192937 53525452 - 53525432 53525472 41 CAGAACACTATTCTAATTGAACAATGTAAGTTCCATATTTC CAGAACTCTATTCTAATTGAACAATGTAAGTTCCATATTTC < 41bp 1 0.51045469227237 1 0.076232522726059 experiment 0.979090615455261 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 7 AKTIP;RBL2 ENSG00000103479;ENSG00000166971 UTR3 Human other chr16:53525452 chr16:53525466 . . 0 hm6A_associated_SNPs_17264 0 0 1 3 53525461 53525484 mRNA hsa-miR-142-3p AKTIP miRanda miRanda
14034 chr16 53525466 53525466 1 - T A rs7192937 53525452 - 53525432 53525472 41 CAGAACACTATTCTAATTGAACAATGTAAGTTCCATATTTC CAGAACTCTATTCTAATTGAACAATGTAAGTTCCATATTTC < 41bp 1 0.51045469227237 1 0.076232522726059 experiment 0.979090615455261 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 7 AKTIP;RBL2 ENSG00000103479;ENSG00000166971 UTR3 Human other chr16:53525452 chr16:53525466 . . 0 hm6A_associated_SNPs_17264 0 0 1 3 53525448 53525470 mRNA hsa-miR-375 AKTIP miRanda miRanda
14034 chr16 53525466 53525466 1 - T A rs7192937 53525468 - 53525448 53525488 41 TTTATAAATATTTTTGCAGAACACTATTCTAATTGAACAAT TTTATAAATATTTTTGCAGAACTCTATTCTAATTGAACAAT < 41bp 1 0.239822235312534 1 0.0425805747509003 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 AKTIP;RBL2 ENSG00000103479;ENSG00000166971 UTR3 Human other chr16:53525468 chr16:53525466 . . 0 hm6A_associated_SNPs_17265 0 0 1 3 53525444 53525466 mRNA hsa-miR-33a AKTIP miRanda miRanda
14034 chr16 53525466 53525466 1 - T A rs7192937 53525468 - 53525448 53525488 41 TTTATAAATATTTTTGCAGAACACTATTCTAATTGAACAAT TTTATAAATATTTTTGCAGAACTCTATTCTAATTGAACAAT < 41bp 1 0.239822235312534 1 0.0425805747509003 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 AKTIP;RBL2 ENSG00000103479;ENSG00000166971 UTR3 Human other chr16:53525468 chr16:53525466 . . 0 hm6A_associated_SNPs_17265 0 0 1 3 53525461 53525484 mRNA hsa-miR-142-3p AKTIP miRanda miRanda
14034 chr16 53525466 53525466 1 - T A rs7192937 53525468 - 53525448 53525488 41 TTTATAAATATTTTTGCAGAACACTATTCTAATTGAACAAT TTTATAAATATTTTTGCAGAACTCTATTCTAATTGAACAAT < 41bp 1 0.239822235312534 1 0.0425805747509003 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 AKTIP;RBL2 ENSG00000103479;ENSG00000166971 UTR3 Human other chr16:53525468 chr16:53525466 . . 0 hm6A_associated_SNPs_17265 0 0 1 3 53525448 53525470 mRNA hsa-miR-375 AKTIP miRanda miRanda
14034 chr16 54148269 54148269 1 + A T rs114255834 54148288 + 54148268 54148308 41 TATATGTGTGTGACTATTGAACTCTATTCGTAGACTGCTTG TTTATGTGTGTGACTATTGAACTCTATTCGTAGACTGCTTG < 41bp 1 0.179770218059312 1 0.0388582646846771 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 2 FTO ENSG00000214696 ncRNA_exonic Human other chr16:54148288 chr16:54148269 . . 0 hm6A_associated_SNPs_17268 1 0 1 1 54148260 54148281 mRNA hsa-miR-377 FTO miRanda miRanda
14034 chr16 55618208 55618208 1 + G A rs148091448 55618194 + 55618174 55618214 41 AATTTTATTTTGTTAAGTGGACTCTCAAATTTTAGAACTTG AATTTTATTTTGTTAAGTGGACTCTCAAATTTTAAAACTTG < 41bp 1 0.178658759107107 1 0.159604698419571 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 35 LPCAT2 ENSG00000087253 UTR3 Human protein_coding chr16:55618194 chr16:55618208 . . 0 hm6A_associated_SNPs_17271 0 0 1 1 55618198 55618220 mRNA hsa-miR-377 LPCAT2 miRanda miRanda
14034 chr16 56510223 56510223 1 + A G rs117876365 56510221 + 56510201 56510241 41 ACTACATGGTAGCTTGCCTGACAGTGTTCTTAAAACTGGTT ACTACATGGTAGCTTGCCTGACGGTGTTCTTAAAACTGGTT Direct Loss 1 0.689729322653107 1 0.949725985527039 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 23 OGFOD1 ENSG00000087263 UTR3 Human protein_coding chr16:56510221 chr16:56510223 . . 0 hm6A_associated_SNPs_17275 0 0 1 2 56510208 56510229 mRNA hsa-miR-141 OGFOD1 miRanda miRanda
14034 chr16 56510223 56510223 1 + A G rs117876365 56510221 + 56510201 56510241 41 ACTACATGGTAGCTTGCCTGACAGTGTTCTTAAAACTGGTT ACTACATGGTAGCTTGCCTGACGGTGTTCTTAAAACTGGTT Direct Loss 1 0.689729322653107 1 0.949725985527039 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 23 OGFOD1 ENSG00000087263 UTR3 Human protein_coding chr16:56510221 chr16:56510223 . . 0 hm6A_associated_SNPs_17275 0 0 1 2 56510208 56510229 mRNA hsa-miR-200a OGFOD1 miRanda miRanda
14034 chr16 56510223 56510223 1 + A G rs117876365 56510235 + 56510215 56510255 41 TGCCTGACAGTGTTCTTAAAACTGGTTGTCTTTTACTAGGA TGCCTGACGGTGTTCTTAAAACTGGTTGTCTTTTACTAGGA < 41bp 1 0.708199561305734 1 0.953721046447754 experiment 0.583600877388533 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 OGFOD1 ENSG00000087263 UTR3 Human protein_coding chr16:56510235 chr16:56510223 . . 0 hm6A_associated_SNPs_17276 0 0 1 2 56510208 56510229 mRNA hsa-miR-141 OGFOD1 miRanda miRanda
14034 chr16 56510223 56510223 1 + A G rs117876365 56510235 + 56510215 56510255 41 TGCCTGACAGTGTTCTTAAAACTGGTTGTCTTTTACTAGGA TGCCTGACGGTGTTCTTAAAACTGGTTGTCTTTTACTAGGA < 41bp 1 0.708199561305734 1 0.953721046447754 experiment 0.583600877388533 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 OGFOD1 ENSG00000087263 UTR3 Human protein_coding chr16:56510235 chr16:56510223 . . 0 hm6A_associated_SNPs_17276 0 0 1 2 56510208 56510229 mRNA hsa-miR-200a OGFOD1 miRanda miRanda
14034 chr16 56511066 56511066 1 + A G rs10438565 56511064 + 56511044 56511084 41 AAAAAAAAAAGAAGAAAAAAACATAAGTGATTGCAGAATTT AAAAAAAAAAGAAGAAAAAAACGTAAGTGATTGCAGAATTT Direct Loss 1 0.29018407817722 1 0.0259691476821899 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 23 OGFOD1 ENSG00000087263 UTR3 Human protein_coding chr16:56511064 chr16:56511066 . . 0 hm6A_associated_SNPs_17278 0 0 0 1 56511059 56511082 mRNA hsa-miR-544 OGFOD1 miRanda miRanda
14034 chr16 57116514 57116514 1 + T A rs27194 57116517 + 57116497 57116537 41 TTCGCCCACTGGGATAATTGACTCAGGAAAGAAGAGCCTCG TTCGCCCACTGGGATAAATGACTCAGGAAAGAAGAGCCTCG < 41bp 1 0.696673912937986 1 0.958910942077637 experiment 0.606652174124028 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 NLRC5 ENSG00000140853 UTR3 Human protein_coding chr16:57116517 chr16:57116514 . . 0 hm6A_associated_SNPs_17291 0 0 0 1 57116505 57116526 mRNA hsa-miR-384 NLRC5 miRanda miRanda
14034 chr16 57505313 57505313 1 + T C rs149894172 57505328 + 57505308 57505348 41 ACCTGTAGGGAACCAACTAGACTTCTCTCCTGGTTAGTCCA ACCTGCAGGGAACCAACTAGACTTCTCTCCTGGTTAGTCCA < 41bp 1 0.794236661170381 1 0.118499428033829 experiment 0.411526677659238 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 POLR2C ENSG00000102978 UTR3 Human protein_coding chr16:57505328 chr16:57505313 . . 0 hm6A_associated_SNPs_17314 0 0 1 2 57505290 57505313 mRNA hsa-miR-148a POLR2C miRanda miRanda
14034 chr16 57505313 57505313 1 + T C rs149894172 57505328 + 57505308 57505348 41 ACCTGTAGGGAACCAACTAGACTTCTCTCCTGGTTAGTCCA ACCTGCAGGGAACCAACTAGACTTCTCTCCTGGTTAGTCCA < 41bp 1 0.794236661170381 1 0.118499428033829 experiment 0.411526677659238 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 POLR2C ENSG00000102978 UTR3 Human protein_coding chr16:57505328 chr16:57505313 . . 0 hm6A_associated_SNPs_17314 0 0 1 2 57505295 57505316 mRNA hsa-miR-139-5p POLR2C miRanda miRanda
14034 chr16 58054994 58054994 1 + G T rs190241788 58054979 + 58054959 58054999 41 TTATCCCTGGTCGAGCCAGGACACGGGGTGCTTCAGTGGGT TTATCCCTGGTCGAGCCAGGACACGGGGTGCTTCATTGGGT < 41bp 1 0.692692980791968 1 0.00607988238334656 experiment 0.614614038416065 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 36 USB1 ENSG00000103005 UTR3 Human protein_coding chr16:58054979 chr16:58054994 . . 0 hm6A_associated_SNPs_17333 0 0 1 2 58054993 58055016 mRNA hsa-miR-185 C16orf57 miRanda miRanda
14034 chr16 58054994 58054994 1 + G T rs190241788 58054979 + 58054959 58054999 41 TTATCCCTGGTCGAGCCAGGACACGGGGTGCTTCAGTGGGT TTATCCCTGGTCGAGCCAGGACACGGGGTGCTTCATTGGGT < 41bp 1 0.692692980791968 1 0.00607988238334656 experiment 0.614614038416065 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 36 USB1 ENSG00000103005 UTR3 Human protein_coding chr16:58054979 chr16:58054994 . . 0 hm6A_associated_SNPs_17333 0 0 1 2 58054989 58055007 mRNA hsa-miR-542-3p C16orf57 miRanda miRanda
14034 chr16 58439023 58439023 1 + T C rs114925045 58439021 + 58439001 58439041 41 GCCACAAAGCACAGGTACAAACTGGGTCATCGCCTGTTCAC GCCACAAAGCACAGGTACAAACCGGGTCATCGCCTGTTCAC < 41bp 1 0.281033183007854 1 0.386071860790253 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 GINS3 ENSG00000181938 UTR3 Human protein_coding chr16:58439021 chr16:58439023 . . 0 hm6A_associated_SNPs_17334 0 0 1 1 58439020 58439041 mRNA hsa-miR-488 GINS3 miRanda miRanda
14034 chr16 58439694 58439694 1 + C T rs139356640 58439685 + 58439665 58439705 41 AACCTCAGGTTGAGAAAGAAACAGGGTTCCCTGGGCCCATT AACCTCAGGTTGAGAAAGAAACAGGGTTCTCTGGGCCCATT < 41bp 1 0.470734124608988 1 0.70552670955658 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 GINS3 ENSG00000181938 UTR3 Human protein_coding chr16:58439685 chr16:58439694 . . 0 hm6A_associated_SNPs_17337 0 0 1 2 58439694 58439714 mRNA hsa-miR-212 GINS3 miRanda miRanda
14034 chr16 58439694 58439694 1 + C T rs139356640 58439685 + 58439665 58439705 41 AACCTCAGGTTGAGAAAGAAACAGGGTTCCCTGGGCCCATT AACCTCAGGTTGAGAAAGAAACAGGGTTCTCTGGGCCCATT < 41bp 1 0.470734124608988 1 0.70552670955658 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 GINS3 ENSG00000181938 UTR3 Human protein_coding chr16:58439685 chr16:58439694 . . 0 hm6A_associated_SNPs_17337 0 0 1 2 58439690 58439714 mRNA hsa-miR-132 GINS3 miRanda miRanda
14034 chr16 58439694 58439694 1 + C T rs139356640 58439708 + 58439688 58439728 41 GGGTTCCCTGGGCCCATTAGACTGTTTGCAGGGCATCACTG GGGTTCTCTGGGCCCATTAGACTGTTTGCAGGGCATCACTG < 41bp 1 0.554312254027819 1 0.932826340198517 experiment 0.891375491944362 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 7 GINS3 ENSG00000181938 UTR3 Human protein_coding chr16:58439708 chr16:58439694 . . 0 hm6A_associated_SNPs_17338 0 0 1 2 58439694 58439714 mRNA hsa-miR-212 GINS3 miRanda miRanda
14034 chr16 58439694 58439694 1 + C T rs139356640 58439708 + 58439688 58439728 41 GGGTTCCCTGGGCCCATTAGACTGTTTGCAGGGCATCACTG GGGTTCTCTGGGCCCATTAGACTGTTTGCAGGGCATCACTG < 41bp 1 0.554312254027819 1 0.932826340198517 experiment 0.891375491944362 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 7 GINS3 ENSG00000181938 UTR3 Human protein_coding chr16:58439708 chr16:58439694 . . 0 hm6A_associated_SNPs_17338 0 0 1 2 58439690 58439714 mRNA hsa-miR-132 GINS3 miRanda miRanda
14034 chr16 58552349 58552349 1 + G A rs11865588 58552363 + 58552343 58552383 41 CGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA CGCTGGAATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA < 41bp 1 0.674348291983392 1 0.864026427268982 experiment 0.651303416033216 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552363 chr16:58552349 nonsynonymous SNV 0.934 0 hm6A_associated_SNPs_17339 0 0 0 3 58552346 58552369 mRNA hsa-miR-145 SETD6 miRanda miRanda
14034 chr16 58552349 58552349 1 + G A rs11865588 58552363 + 58552343 58552383 41 CGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA CGCTGGAATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA < 41bp 1 0.674348291983392 1 0.864026427268982 experiment 0.651303416033216 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552363 chr16:58552349 nonsynonymous SNV 0.934 0 hm6A_associated_SNPs_17339 0 0 0 3 58552341 58552362 mRNA hsa-miR-153 SETD6 miRanda miRanda
14034 chr16 58552349 58552349 1 + G A rs11865588 58552363 + 58552343 58552383 41 CGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA CGCTGGAATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA < 41bp 1 0.674348291983392 1 0.864026427268982 experiment 0.651303416033216 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552363 chr16:58552349 nonsynonymous SNV 0.934 0 hm6A_associated_SNPs_17339 0 0 0 3 58552347 58552370 mRNA hsa-miR-136 SETD6 miRanda miRanda
14034 chr16 66600479 66600479 1 + G A rs7193473 66600483 + 66600463 66600503 41 GGAACTTGAAACAACCGGAGACTGCCGCAGCCCTGGCAAGT GGAACTTGAAACAACCAGAGACTGCCGCAGCCCTGGCAAGT < 41bp 1 0.730378680144963 1 0.982220351696014 experiment 0.539242639710074 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 CMTM1 ENSG00000089505 CDS Human protein_coding chr16:66600483 chr16:66600479 synonymous SNV . 0 hm6A_associated_SNPs_17342 0 0 0 1 66600479 66600497 mRNA hsa-miR-214 CMTM1 miRanda miRanda
14034 chr16 67181976 67181976 1 + C G rs574242276 67181989 + 67181969 67182009 41 TATTAATCCTTTTGAAAAGAACTGAGAAGAAAAATGTATAA TATTAATGCTTTTGAAAAGAACTGAGAAGAAAAATGTATAA < 41bp 1 0.582874413339539 1 0.757542967796326 experiment 0.834251173320922 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 C16orf70 ENSG00000125149 UTR3 Human protein_coding chr16:67181989 chr16:67181976 . . 0 hm6A_associated_SNPs_17363 0 0 1 1 67181972 67181995 mRNA hsa-miR-223 C16orf70 miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672501 + 67672481 67672521 41 TGTAGCAGAATGGCACCCAGACCACTGCCCACCAGTGACGG TGTAGCAGAATGGCACCCAGACCACTGCGCACCAGTGACGG < 41bp 1 0.226945059204705 1 0.867613554000854 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672501 chr16:67672509 . . 0 hm6A_associated_SNPs_17385 0 0 1 4 67672489 67672510 mRNA hsa-miR-34a CTCF miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672501 + 67672481 67672521 41 TGTAGCAGAATGGCACCCAGACCACTGCCCACCAGTGACGG TGTAGCAGAATGGCACCCAGACCACTGCGCACCAGTGACGG < 41bp 1 0.226945059204705 1 0.867613554000854 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672501 chr16:67672509 . . 0 hm6A_associated_SNPs_17385 0 0 1 4 67672487 67672510 mRNA hsa-miR-34c-5p CTCF miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672501 + 67672481 67672521 41 TGTAGCAGAATGGCACCCAGACCACTGCCCACCAGTGACGG TGTAGCAGAATGGCACCCAGACCACTGCGCACCAGTGACGG < 41bp 1 0.226945059204705 1 0.867613554000854 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672501 chr16:67672509 . . 0 hm6A_associated_SNPs_17385 0 0 1 4 67672489 67672510 mRNA hsa-miR-449a CTCF miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672501 + 67672481 67672521 41 TGTAGCAGAATGGCACCCAGACCACTGCCCACCAGTGACGG TGTAGCAGAATGGCACCCAGACCACTGCGCACCAGTGACGG < 41bp 1 0.226945059204705 1 0.867613554000854 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672501 chr16:67672509 . . 0 hm6A_associated_SNPs_17385 0 0 1 4 67672489 67672510 mRNA hsa-miR-449b CTCF miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672522 + 67672502 67672542 41 CCACTGCCCACCAGTGACGGACATGCACGTGGCAGATCATG CCACTGCGCACCAGTGACGGACATGCACGTGGCAGATCATG < 41bp 1 0.753888151902795 1 0.975247323513031 experiment 0.492223696194411 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 8 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672522 chr16:67672509 . . 0 hm6A_associated_SNPs_17386 0 0 1 4 67672489 67672510 mRNA hsa-miR-34a CTCF miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672522 + 67672502 67672542 41 CCACTGCCCACCAGTGACGGACATGCACGTGGCAGATCATG CCACTGCGCACCAGTGACGGACATGCACGTGGCAGATCATG < 41bp 1 0.753888151902795 1 0.975247323513031 experiment 0.492223696194411 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 8 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672522 chr16:67672509 . . 0 hm6A_associated_SNPs_17386 0 0 1 4 67672487 67672510 mRNA hsa-miR-34c-5p CTCF miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672522 + 67672502 67672542 41 CCACTGCCCACCAGTGACGGACATGCACGTGGCAGATCATG CCACTGCGCACCAGTGACGGACATGCACGTGGCAGATCATG < 41bp 1 0.753888151902795 1 0.975247323513031 experiment 0.492223696194411 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 8 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672522 chr16:67672509 . . 0 hm6A_associated_SNPs_17386 0 0 1 4 67672489 67672510 mRNA hsa-miR-449a CTCF miRanda miRanda
14034 chr16 67672509 67672509 1 + C G rs117676849 67672522 + 67672502 67672542 41 CCACTGCCCACCAGTGACGGACATGCACGTGGCAGATCATG CCACTGCGCACCAGTGACGGACATGCACGTGGCAGATCATG < 41bp 1 0.753888151902795 1 0.975247323513031 experiment 0.492223696194411 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 8 CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672522 chr16:67672509 . . 0 hm6A_associated_SNPs_17386 0 0 1 4 67672489 67672510 mRNA hsa-miR-449b CTCF miRanda miRanda
14034 chr16 68293756 68293756 1 + C G rs373150655 68293760 + 68293740 68293780 41 AGGAAGAAATGAGAGTCTAGACTCAAGGGACACTGGATGGC AGGAAGAAATGAGAGTGTAGACTCAAGGGACACTGGATGGC < 41bp 1 0.676561302410323 1 0.990391612052917 experiment 0.646877395179354 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PLA2G15 ENSG00000260441 ncRNA_intronic Human antisense chr16:68293760 chr16:68293756 . . 0 hm6A_associated_SNPs_17396 0 0 1 2 68293750 68293776 mRNA hsa-miR-199a-5p PLA2G15 miRanda miRanda
14034 chr16 68293756 68293756 1 + C G rs373150655 68293760 + 68293740 68293780 41 AGGAAGAAATGAGAGTCTAGACTCAAGGGACACTGGATGGC AGGAAGAAATGAGAGTGTAGACTCAAGGGACACTGGATGGC < 41bp 1 0.676561302410323 1 0.990391612052917 experiment 0.646877395179354 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PLA2G15 ENSG00000260441 ncRNA_intronic Human antisense chr16:68293760 chr16:68293756 . . 0 hm6A_associated_SNPs_17396 0 0 1 2 68293750 68293776 mRNA hsa-miR-199b-5p PLA2G15 miRanda miRanda
14034 chr16 68334564 68334564 1 - T C rs75492531 68334573 - 68334553 68334593 41 TTTGGCAGTGGGGCCAAGAAACAATATATATGAATGTGATA TTTGGCAGTGGGGCCAAGAAACAATATATGTGAATGTGATA < 41bp 1 0.256798149411694 1 0.316663205623627 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SLC7A6;SLC7A6OS ENSG00000103061;ENSG00000103064 UTR3 Human other chr16:68334573 chr16:68334564 . . 0 hm6A_associated_SNPs_17399 0 0 1 7 68334554 68334574 mRNA hsa-miR-23a SLC7A6OS miRanda miRanda
14034 chr16 68334564 68334564 1 - T C rs75492531 68334573 - 68334553 68334593 41 TTTGGCAGTGGGGCCAAGAAACAATATATATGAATGTGATA TTTGGCAGTGGGGCCAAGAAACAATATATGTGAATGTGATA < 41bp 1 0.256798149411694 1 0.316663205623627 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SLC7A6;SLC7A6OS ENSG00000103061;ENSG00000103064 UTR3 Human other chr16:68334573 chr16:68334564 . . 0 hm6A_associated_SNPs_17399 0 0 1 7 68334556 68334578 mRNA hsa-miR-181a SLC7A6OS miRanda miRanda
14034 chr16 68334564 68334564 1 - T C rs75492531 68334573 - 68334553 68334593 41 TTTGGCAGTGGGGCCAAGAAACAATATATATGAATGTGATA TTTGGCAGTGGGGCCAAGAAACAATATATGTGAATGTGATA < 41bp 1 0.256798149411694 1 0.316663205623627 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SLC7A6;SLC7A6OS ENSG00000103061;ENSG00000103064 UTR3 Human other chr16:68334573 chr16:68334564 . . 0 hm6A_associated_SNPs_17399 0 0 1 7 68334556 68334578 mRNA hsa-miR-181b SLC7A6OS miRanda miRanda
14034 chr16 68334564 68334564 1 - T C rs75492531 68334573 - 68334553 68334593 41 TTTGGCAGTGGGGCCAAGAAACAATATATATGAATGTGATA TTTGGCAGTGGGGCCAAGAAACAATATATGTGAATGTGATA < 41bp 1 0.256798149411694 1 0.316663205623627 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SLC7A6;SLC7A6OS ENSG00000103061;ENSG00000103064 UTR3 Human other chr16:68334573 chr16:68334564 . . 0 hm6A_associated_SNPs_17399 0 0 1 7 68334556 68334578 mRNA hsa-miR-181c SLC7A6OS miRanda miRanda
14034 chr16 68334564 68334564 1 - T C rs75492531 68334573 - 68334553 68334593 41 TTTGGCAGTGGGGCCAAGAAACAATATATATGAATGTGATA TTTGGCAGTGGGGCCAAGAAACAATATATGTGAATGTGATA < 41bp 1 0.256798149411694 1 0.316663205623627 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SLC7A6;SLC7A6OS ENSG00000103061;ENSG00000103064 UTR3 Human other chr16:68334573 chr16:68334564 . . 0 hm6A_associated_SNPs_17399 0 0 1 7 68334554 68334574 mRNA hsa-miR-23b SLC7A6OS miRanda miRanda
14034 chr16 68334564 68334564 1 - T C rs75492531 68334573 - 68334553 68334593 41 TTTGGCAGTGGGGCCAAGAAACAATATATATGAATGTGATA TTTGGCAGTGGGGCCAAGAAACAATATATGTGAATGTGATA < 41bp 1 0.256798149411694 1 0.316663205623627 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SLC7A6;SLC7A6OS ENSG00000103061;ENSG00000103064 UTR3 Human other chr16:68334573 chr16:68334564 . . 0 hm6A_associated_SNPs_17399 0 0 1 7 68334556 68334581 mRNA hsa-miR-181d SLC7A6OS miRanda miRanda
14034 chr16 68334564 68334564 1 - T C rs75492531 68334573 - 68334553 68334593 41 TTTGGCAGTGGGGCCAAGAAACAATATATATGAATGTGATA TTTGGCAGTGGGGCCAAGAAACAATATATGTGAATGTGATA < 41bp 1 0.256798149411694 1 0.316663205623627 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SLC7A6;SLC7A6OS ENSG00000103061;ENSG00000103064 UTR3 Human other chr16:68334573 chr16:68334564 . . 0 hm6A_associated_SNPs_17399 0 0 1 7 68334555 68334576 mRNA hsa-miR-543 SLC7A6OS miRanda miRanda
14034 chr16 68600855 68600855 1 + G C rs7118 68600869 + 68600849 68600889 41 AACTCAGCACATCTTCATTGACAGGGAGGGAGCCCAGGACA AACTCACCACATCTTCATTGACAGGGAGGGAGCCCAGGACA < 41bp 1 0.164064305854082 1 0.0229365229606628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 7 ZFP90 ENSG00000184939 UTR3 Human protein_coding chr16:68600869 chr16:68600855 . . 0 hm6A_associated_SNPs_17405 0 0 0 1 68600853 68600875 mRNA hsa-miR-339-5p ZFP90 miRanda miRanda
14034 chr16 69152586 69152586 1 - C T rs147852683 69152568 - 69152548 69152588 41 ATGTTATTTGTGGCATGTGAACTGTGGCAGGTGGGAATAAT ATATTATTTGTGGCATGTGAACTGTGGCAGGTGGGAATAAT < 41bp 1 0.720325292086141 1 0.952666938304901 experiment 0.559349415827717 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 CHTF8;HAS3 ENSG00000103044;ENSG00000168802 UTR3 Human other chr16:69152568 chr16:69152586 . . 0 hm6A_associated_SNPs_17415 0 0 1 3 69152563 69152587 mRNA hsa-miR-181a CHTF8 miRanda miRanda
14034 chr16 69152586 69152586 1 - C T rs147852683 69152568 - 69152548 69152588 41 ATGTTATTTGTGGCATGTGAACTGTGGCAGGTGGGAATAAT ATATTATTTGTGGCATGTGAACTGTGGCAGGTGGGAATAAT < 41bp 1 0.720325292086141 1 0.952666938304901 experiment 0.559349415827717 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 CHTF8;HAS3 ENSG00000103044;ENSG00000168802 UTR3 Human other chr16:69152568 chr16:69152586 . . 0 hm6A_associated_SNPs_17415 0 0 1 3 69152563 69152587 mRNA hsa-miR-181b CHTF8 miRanda miRanda
14034 chr16 69152586 69152586 1 - C T rs147852683 69152568 - 69152548 69152588 41 ATGTTATTTGTGGCATGTGAACTGTGGCAGGTGGGAATAAT ATATTATTTGTGGCATGTGAACTGTGGCAGGTGGGAATAAT < 41bp 1 0.720325292086141 1 0.952666938304901 experiment 0.559349415827717 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 CHTF8;HAS3 ENSG00000103044;ENSG00000168802 UTR3 Human other chr16:69152568 chr16:69152586 . . 0 hm6A_associated_SNPs_17415 0 0 1 3 69152584 69152604 mRNA hsa-miR-181c CHTF8 miRanda miRanda
14034 chr16 69152586 69152586 1 - C T rs147852683 69152600 - 69152580 69152620 41 TTTCCTTTGCGTTTTTCTTGACTGAAGGTGAGATGTTATTT TTTCCTTTGCGTTTTTCTTGACTGAAGGTGAGATATTATTT < 41bp 1 0.619660060400432 1 0.107413589954376 experiment 0.760679879199136 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 CHTF8;HAS3 ENSG00000103044;ENSG00000168802 UTR3 Human other chr16:69152600 chr16:69152586 . . 0 hm6A_associated_SNPs_17416 0 0 1 3 69152563 69152587 mRNA hsa-miR-181a CHTF8 miRanda miRanda
14034 chr16 69152586 69152586 1 - C T rs147852683 69152600 - 69152580 69152620 41 TTTCCTTTGCGTTTTTCTTGACTGAAGGTGAGATGTTATTT TTTCCTTTGCGTTTTTCTTGACTGAAGGTGAGATATTATTT < 41bp 1 0.619660060400432 1 0.107413589954376 experiment 0.760679879199136 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 CHTF8;HAS3 ENSG00000103044;ENSG00000168802 UTR3 Human other chr16:69152600 chr16:69152586 . . 0 hm6A_associated_SNPs_17416 0 0 1 3 69152563 69152587 mRNA hsa-miR-181b CHTF8 miRanda miRanda
14034 chr16 69152586 69152586 1 - C T rs147852683 69152600 - 69152580 69152620 41 TTTCCTTTGCGTTTTTCTTGACTGAAGGTGAGATGTTATTT TTTCCTTTGCGTTTTTCTTGACTGAAGGTGAGATATTATTT < 41bp 1 0.619660060400432 1 0.107413589954376 experiment 0.760679879199136 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 CHTF8;HAS3 ENSG00000103044;ENSG00000168802 UTR3 Human other chr16:69152600 chr16:69152586 . . 0 hm6A_associated_SNPs_17416 0 0 1 3 69152584 69152604 mRNA hsa-miR-181c CHTF8 miRanda miRanda
14034 chr16 69202908 69202908 1 + A G rs74886619 69202910 + 69202890 69202930 41 TCACAAATCATGGTAATAAAACAAGTTATTCTTGAGGACTA TCACAAATCATGGTAATAGAACAAGTTATTCTTGAGGACTA < 41bp 1 0.201797776893177 1 0.723149478435516 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 UTP4 ENSG00000141076 UTR3 Human protein_coding chr16:69202910 chr16:69202908 . . 0 hm6A_associated_SNPs_17422 0 0 1 1 69202902 69202924 mRNA hsa-miR-186 CIRH1A miRanda miRanda
14034 chr16 69375864 69375864 1 + T C rs192456022 69375875 + 69375855 69375895 41 GCTTATTGTTATCTGTGATAACACTGTTTTCTAAACACAAG GCTTATTGTCATCTGTGATAACACTGTTTTCTAAACACAAG < 41bp 1 0.692325378863603 1 0.227724373340607 experiment 0.615349242272794 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 NIP7 ENSG00000132603 UTR3 Human protein_coding chr16:69375875 chr16:69375864 . . 0 hm6A_associated_SNPs_17426 0 0 1 2 69375850 69375873 mRNA hsa-miR-27a NIP7 miRanda miRanda
14034 chr16 69375864 69375864 1 + T C rs192456022 69375875 + 69375855 69375895 41 GCTTATTGTTATCTGTGATAACACTGTTTTCTAAACACAAG GCTTATTGTCATCTGTGATAACACTGTTTTCTAAACACAAG < 41bp 1 0.692325378863603 1 0.227724373340607 experiment 0.615349242272794 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 NIP7 ENSG00000132603 UTR3 Human protein_coding chr16:69375875 chr16:69375864 . . 0 hm6A_associated_SNPs_17426 0 0 1 2 69375850 69375873 mRNA hsa-miR-27b NIP7 miRanda miRanda
14034 chr16 69376150 69376150 1 + A G rs58641063 69376135 + 69376115 69376155 41 ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAATCAGC ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAGTCAGC < 41bp 1 0.471269300401111 1 0.0681357979774475 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 NIP7 ENSG00000132603 UTR3 Human protein_coding chr16:69376135 chr16:69376150 . . 0 hm6A_associated_SNPs_17427 0 0 1 4 69376138 69376159 mRNA hsa-miR-320a NIP7 miRanda miRanda
14034 chr16 69376150 69376150 1 + A G rs58641063 69376135 + 69376115 69376155 41 ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAATCAGC ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAGTCAGC < 41bp 1 0.471269300401111 1 0.0681357979774475 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 NIP7 ENSG00000132603 UTR3 Human protein_coding chr16:69376135 chr16:69376150 . . 0 hm6A_associated_SNPs_17427 0 0 1 4 69376138 69376159 mRNA hsa-miR-320b NIP7 miRanda miRanda
14034 chr16 69376150 69376150 1 + A G rs58641063 69376135 + 69376115 69376155 41 ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAATCAGC ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAGTCAGC < 41bp 1 0.471269300401111 1 0.0681357979774475 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 NIP7 ENSG00000132603 UTR3 Human protein_coding chr16:69376135 chr16:69376150 . . 0 hm6A_associated_SNPs_17427 0 0 1 4 69376140 69376159 mRNA hsa-miR-320c NIP7 miRanda miRanda
14034 chr16 69376150 69376150 1 + A G rs58641063 69376135 + 69376115 69376155 41 ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAATCAGC ATTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAGTCAGC < 41bp 1 0.471269300401111 1 0.0681357979774475 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 NIP7 ENSG00000132603 UTR3 Human protein_coding chr16:69376135 chr16:69376150 . . 0 hm6A_associated_SNPs_17427 0 0 1 4 69376141 69376159 mRNA hsa-miR-320d NIP7 miRanda miRanda
14034 chr16 69975085 69975085 1 + G A rs73580178 69975087 + 69975067 69975107 41 CGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCT CGCCAGCCTCCAACACGGAGACTCTGCCGTAACTGGAATCT < 41bp 1 0.405802258397829 1 0.892858803272247 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 WWP2 ENSG00000198373 UTR3 Human protein_coding chr16:69975087 chr16:69975085 . . 0 hm6A_associated_SNPs_17445 0 0 1 1 69975083 69975104 mRNA hsa-miR-145 WWP2 miRanda miRanda
14034 chr16 69975094 69975094 1 + C T rs576132072 69975087 + 69975067 69975107 41 CGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCT CGCCAGCCTCCAACACGGGGACTCTGCTGTAACTGGAATCT < 41bp 1 0.506337970966368 1 0.890485763549805 experiment 0.987324058067264 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 WWP2 ENSG00000198373 UTR3 Human protein_coding chr16:69975087 chr16:69975094 . . 0 hm6A_associated_SNPs_17446 0 0 1 1 69975083 69975104 mRNA hsa-miR-145 WWP2 miRanda miRanda
14034 chr16 70193031 70193031 1 + A G rs58769873 70193042 + 70193022 70193062 41 ATCCCACATAGAGTTTTAAGACTTGGATTCTCTTCTGCCCT ATCCCACATGGAGTTTTAAGACTTGGATTCTCTTCTGCCCT < 41bp 1 0.105036849215478 1 0.262729287147522 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 LOC400541 ENSG00000247228 ncRNA_exonic Human antisense chr16:70193042 chr16:70193031 . . 0 hm6A_associated_SNPs_17458 0 0 1 1 70193010 70193031 mRNA hsa-miR-299-3p PDPR miRanda miRanda
14034 chr16 70367545 70367545 1 + G A rs397821730 70367537 + 70367517 70367557 41 GCACTGCCCCTGCACAGGAGACAAGTGCGTTCAGGGCACAG GCACTGCCCCTGCACAGGAGACAAGTGCATTCAGGGCACAG < 41bp 1 0.575957083404016 1 0.89115709066391 experiment 0.848085833191969 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 LOC100506083 ENSG00000261777 ncRNA_intronic Human processed_transcript chr16:70367537 chr16:70367545 . . 0 hm6A_associated_SNPs_17463 0 0 1 1 70367534 70367555 mRNA hsa-miR-874 DDX19B miRanda miRanda
14034 chr16 70367548 70367548 1 + C G rs148606610 70367537 + 70367517 70367557 41 GCACTGCCCCTGCACAGGAGACAAGTGCGTTCAGGGCACAG GCACTGCCCCTGCACAGGAGACAAGTGCGTTGAGGGCACAG < 41bp 1 0.588980419389478 1 0.889635920524597 experiment 0.822039161221043 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 LOC100506083 ENSG00000261777 ncRNA_intronic Human processed_transcript chr16:70367537 chr16:70367548 . . 0 hm6A_associated_SNPs_17464 0 0 1 1 70367534 70367555 mRNA hsa-miR-874 DDX19B miRanda miRanda
14034 chr16 70367587 70367587 1 + C G rs1058436 70367578 + 70367558 70367598 41 GCCCCGACATCACCCCAAGGACAACGGCACAAGTAGAGAGA GCCCCGACATCACCCCAAGGACAACGGCAGAAGTAGAGAGA < 41bp 1 0.744730187267076 1 0.929737150669098 experiment 0.510539625465847 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 LOC100506083 ENSG00000261777 ncRNA_intronic Human processed_transcript chr16:70367578 chr16:70367587 . . 0 hm6A_associated_SNPs_17465 0 0 1 2 70367586 70367607 mRNA hsa-miR-196a DDX19B miRanda miRanda
14034 chr16 70367587 70367587 1 + C G rs1058436 70367578 + 70367558 70367598 41 GCCCCGACATCACCCCAAGGACAACGGCACAAGTAGAGAGA GCCCCGACATCACCCCAAGGACAACGGCAGAAGTAGAGAGA < 41bp 1 0.744730187267076 1 0.929737150669098 experiment 0.510539625465847 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 LOC100506083 ENSG00000261777 ncRNA_intronic Human processed_transcript chr16:70367578 chr16:70367587 . . 0 hm6A_associated_SNPs_17465 0 0 1 2 70367585 70367607 mRNA hsa-miR-196b DDX19B miRanda miRanda
14034 chr16 71674960 71674960 1 + A G rs74027272 71674978 + 71674958 71674998 41 ACATTGTTTCTCTCAAAAAGACAGGTCTTTTAAAACTCCGC ACGTTGTTTCTCTCAAAAAGACAGGTCTTTTAAAACTCCGC < 41bp 1 0.135404207760176 1 0.976758301258087 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 MARVELD3 ENSG00000140832 UTR3 Human protein_coding chr16:71674978 chr16:71674960 . . 0 hm6A_associated_SNPs_17473 0 0 0 1 71674941 71674961 mRNA hsa-miR-210 MARVELD3 miRanda miRanda
14034 chr16 71961742 71961742 1 + G A rs138738301 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACATTTT < 41bp 1 0.784221097678616 1 0.858545422554016 experiment 0.431557804642768 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 37 IST1 ENSG00000182149 UTR3 Human protein_coding chr16:71961726 chr16:71961742 . . 0 hm6A_associated_SNPs_17477 0 0 1 1 71961731 71961752 mRNA hsa-miR-150 KIAA0174 miRanda miRanda
14034 chr16 71962713 71962713 1 + C T rs78024202 71962703 + 71962683 71962723 41 TGCTTTCCTGGATGGATGGGACTCTTATGTCATAACTTCTG TGCTTTCCTGGATGGATGGGACTCTTATGTTATAACTTCTG < 41bp 1 0.726299130321109 1 0.866716742515564 experiment 0.547401739357782 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 IST1 ENSG00000182149 UTR3 Human protein_coding chr16:71962703 chr16:71962713 . . 0 hm6A_associated_SNPs_17480 0 0 1 1 71962709 71962728 mRNA hsa-miR-194 KIAA0174 miRanda miRanda
14034 chr16 72058517 72058517 1 + T C rs536185834 72058510 + 72058490 72058530 41 GTGGGCTTCCCAGGAACTTGACTGTCTTTCATTTGATCTTT GTGGGCTTCCCAGGAACTTGACTGTCTCTCATTTGATCTTT < 41bp 1 0.418322277816668 1 0.01701620221138 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 DHODH ENSG00000102967 UTR3 Human protein_coding chr16:72058510 chr16:72058517 . . 0 hm6A_associated_SNPs_17483 0 0 1 1 72058510 72058534 mRNA hsa-miR-340 DHODH miRanda miRanda
14034 chr16 74339784 74339784 1 + C T rs534194805 74339801 + 74339781 74339821 41 CTACGTGGAAGTGAATGGAGACTGATCTCAAATCTGAACTG CTATGTGGAAGTGAATGGAGACTGATCTCAAATCTGAACTG < 41bp 1 0.604733376091592 1 0.950603425502777 experiment 0.790533247816816 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 PSMD7 ENSG00000259972 ncRNA_intronic Human processed_transcript chr16:74339801 chr16:74339784 . . 0 hm6A_associated_SNPs_17495 0 0 1 1 74339779 74339801 mRNA hsa-miR-136 PSMD7 miRanda miRanda
14034 chr16 74339797 74339797 1 + G A rs143705113 74339801 + 74339781 74339821 41 CTACGTGGAAGTGAATGGAGACTGATCTCAAATCTGAACTG CTACGTGGAAGTGAATAGAGACTGATCTCAAATCTGAACTG < 41bp 1 0.729296171651794 1 0.968679964542389 experiment 0.541407656696413 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 PSMD7 ENSG00000259972 ncRNA_intronic Human processed_transcript chr16:74339801 chr16:74339797 . . 0 hm6A_associated_SNPs_17496 0 0 1 1 74339779 74339801 mRNA hsa-miR-136 PSMD7 miRanda miRanda
14034 chr16 75204303 75204303 1 + G A rs76675093 75204300 + 75204280 75204320 41 AGCGGGTGAAAAACCTCATGACAGTATTGAGGGAACATGGG AGCGGGTGAAAAACCTCATGACAATATTGAGGGAACATGGG < 41bp 1 0.731860599596782 1 0.984895467758179 experiment 0.536278800806437 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 ZFP1 ENSG00000184517 UTR3 Human protein_coding chr16:75204300 chr16:75204303 . . 0 hm6A_associated_SNPs_17499 0 0 0 1 75204291 75204311 mRNA hsa-miR-371-5p ZFP1 miRanda miRanda
14034 chr16 75204946 75204946 1 + G A rs28497401 75204959 + 75204939 75204979 41 CTATAACGTGAAGGAGGCAGACATGAGCTGTACTACTCAGT CTATAACATGAAGGAGGCAGACATGAGCTGTACTACTCAGT < 41bp 1 0.248326260533298 1 0.121351718902588 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 8 ZFP1 ENSG00000184517 UTR3 Human protein_coding chr16:75204959 chr16:75204946 . . 0 hm6A_associated_SNPs_17501 0 0 1 1 75204939 75204961 mRNA hsa-miR-346 ZFP1 miRanda miRanda
14034 chr16 75204954 75204954 1 + G A rs187947662 75204959 + 75204939 75204979 41 CTATAACGTGAAGGAGGCAGACATGAGCTGTACTACTCAGT CTATAACGTGAAGGAAGCAGACATGAGCTGTACTACTCAGT < 41bp 1 0.251390557050823 1 0.361219465732574 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 ZFP1 ENSG00000184517 UTR3 Human protein_coding chr16:75204959 chr16:75204954 . . 0 hm6A_associated_SNPs_17502 0 0 1 1 75204939 75204961 mRNA hsa-miR-346 ZFP1 miRanda miRanda
14034 chr16 77232908 77232908 1 + A T rs191689686 77232917 + 77232897 77232937 41 TCGTTTTACTCATCTGTGAAACAGAGATAAGTAACCCTCTC TCGTTTTACTCTTCTGTGAAACAGAGATAAGTAACCCTCTC < 41bp 1 0.418377910058897 1 0.733589470386505 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MON1B ENSG00000103111 UTR3 Human protein_coding chr16:77232917 chr16:77232908 . . 0 hm6A_associated_SNPs_17506 0 0 1 2 77232895 77232916 mRNA hsa-miR-27a MON1B miRanda miRanda
14034 chr16 77232908 77232908 1 + A T rs191689686 77232917 + 77232897 77232937 41 TCGTTTTACTCATCTGTGAAACAGAGATAAGTAACCCTCTC TCGTTTTACTCTTCTGTGAAACAGAGATAAGTAACCCTCTC < 41bp 1 0.418377910058897 1 0.733589470386505 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 MON1B ENSG00000103111 UTR3 Human protein_coding chr16:77232917 chr16:77232908 . . 0 hm6A_associated_SNPs_17506 0 0 1 2 77232895 77232916 mRNA hsa-miR-27b MON1B miRanda miRanda
14034 chr16 78012149 78012149 1 + G A rs569761363 78012141 + 78012121 78012161 41 TTTCTCTCTCCATTTAAGAGACAACTACGGTCAAAAGTTTG TTTCTCTCTCCATTTAAGAGACAACTACAGTCAAAAGTTTG < 41bp 1 0.320675710942962 1 0.0162993669509888 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 VAT1L ENSG00000171724 UTR3 Human protein_coding chr16:78012141 chr16:78012149 . . 0 hm6A_associated_SNPs_17510 0 0 0 2 78012126 78012149 mRNA hsa-miR-142-3p VAT1L miRanda miRanda
14034 chr16 78012149 78012149 1 + G A rs569761363 78012141 + 78012121 78012161 41 TTTCTCTCTCCATTTAAGAGACAACTACGGTCAAAAGTTTG TTTCTCTCTCCATTTAAGAGACAACTACAGTCAAAAGTTTG < 41bp 1 0.320675710942962 1 0.0162993669509888 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 VAT1L ENSG00000171724 UTR3 Human protein_coding chr16:78012141 chr16:78012149 . . 0 hm6A_associated_SNPs_17510 0 0 0 2 78012145 78012164 mRNA hsa-miR-371-5p VAT1L miRanda miRanda
14034 chr16 81411360 81411360 1 + C T rs76000455 81411373 + 81411353 81411393 41 TTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAACT TTTAGCTTTTGTTTGGGAGAACACGTAACTGTTGAAAAACT < 41bp 1 0.38496433645786 1 0.100583612918854 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 GAN ENSG00000261609 UTR3 Human protein_coding chr16:81411373 chr16:81411360 . . 0 hm6A_associated_SNPs_17521 1 0 1 2 81411351 81411372 mRNA hsa-miR-150 GAN miRanda miRanda
14034 chr16 81411360 81411360 1 + C T rs76000455 81411373 + 81411353 81411393 41 TTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAACT TTTAGCTTTTGTTTGGGAGAACACGTAACTGTTGAAAAACT < 41bp 1 0.38496433645786 1 0.100583612918854 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 GAN ENSG00000261609 UTR3 Human protein_coding chr16:81411373 chr16:81411360 . . 0 hm6A_associated_SNPs_17521 1 0 1 2 81411342 81411364 mRNA hsa-miR-335 GAN miRanda miRanda
14034 chr16 81991788 81991788 1 + T C rs80134881 81991792 + 81991772 81991812 41 TCCTATTATTTTCATCTTGGACAACTTTCTTAACTTATATT TCCTATTATTTTCATCCTGGACAACTTTCTTAACTTATATT < 41bp 1 0.410902277295755 1 0.130303293466568 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 17 PLCG2 ENSG00000197943 UTR3 Human protein_coding chr16:81991792 chr16:81991788 . . 0 hm6A_associated_SNPs_17525 0 0 0 1 81991778 81991799 mRNA hsa-miR-382 PLCG2 miRanda miRanda
14034 chr16 83845111 83845111 1 + G A rs557591472 83845112 + 83845092 83845132 41 CAGCTAACTACTATGTGTAGACAGGTTTTATATTATAAAGT CAGCTAACTACTATGTGTAAACAGGTTTTATATTATAAAGT < 41bp 1 0.566898108619628 1 0.550840139389038 experiment 0.866203782760745 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83845112 chr16:83845111 . . 0 hm6A_associated_SNPs_17531 0 0 1 3 83845106 83845129 mRNA hsa-miR-374a HSBP1 miRanda miRanda
14034 chr16 83845111 83845111 1 + G A rs557591472 83845112 + 83845092 83845132 41 CAGCTAACTACTATGTGTAGACAGGTTTTATATTATAAAGT CAGCTAACTACTATGTGTAAACAGGTTTTATATTATAAAGT < 41bp 1 0.566898108619628 1 0.550840139389038 experiment 0.866203782760745 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83845112 chr16:83845111 . . 0 hm6A_associated_SNPs_17531 0 0 1 3 83845097 83845118 mRNA hsa-miR-339-5p HSBP1 miRanda miRanda
14034 chr16 83845111 83845111 1 + G A rs557591472 83845112 + 83845092 83845132 41 CAGCTAACTACTATGTGTAGACAGGTTTTATATTATAAAGT CAGCTAACTACTATGTGTAAACAGGTTTTATATTATAAAGT < 41bp 1 0.566898108619628 1 0.550840139389038 experiment 0.866203782760745 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83845112 chr16:83845111 . . 0 hm6A_associated_SNPs_17531 0 0 1 3 83845105 83845129 mRNA hsa-miR-374b HSBP1 miRanda miRanda
14034 chr16 83845234 83845234 1 + A G rs147680116 83845216 + 83845196 83845236 41 ATGGTATCTTCACATCTTGGACCTTGGTCAGTTGTGCTATT ATGGTATCTTCACATCTTGGACCTTGGTCAGTTGTGCTGTT < 41bp 1 0.485754411111316 1 0.88097095489502 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83845216 chr16:83845234 . . 0 hm6A_associated_SNPs_17532 0 0 1 1 83845231 83845253 mRNA hsa-miR-142-3p HSBP1 miRanda miRanda
14034 chr16 83845400 83845400 1 + A G rs192629498 83845381 + 83845361 83845401 41 GATGTGTGATTTTTTATTAAACAAATAGTAAACCCTTCAAT GATGTGTGATTTTTTATTAAACAAATAGTAAACCCTTCAGT < 41bp 1 0.561798526844218 1 0.137449622154236 experiment 0.876402946311563 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83845381 chr16:83845400 . . 0 hm6A_associated_SNPs_17533 0 0 1 1 83845376 83845400 mRNA hsa-miR-488 HSBP1 miRanda miRanda
14034 chr16 83846162 83846162 1 + T A rs145106184 83846142 + 83846122 83846162 41 CAAAGTGCTTTTACACAAAAACTTGAAAATTTGAAAAACAT CAAAGTGCTTTTACACAAAAACTTGAAAATTTGAAAAACAA < 41bp 1 0.146510862912647 1 0.900986850261688 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83846142 chr16:83846162 . . 0 hm6A_associated_SNPs_17535 0 0 1 1 83846160 83846181 mRNA hsa-miR-539 HSBP1 miRanda miRanda
14034 chr16 83846162 83846162 1 + T A rs145106184 83846159 + 83846139 83846179 41 AAAACTTGAAAATTTGAAAAACATGATTTTTTTAAGTTTCT AAAACTTGAAAATTTGAAAAACAAGATTTTTTTAAGTTTCT < 41bp 1 0.328846311741566 1 0.723185241222382 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 24 HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83846159 chr16:83846162 . . 0 hm6A_associated_SNPs_17536 0 0 1 1 83846160 83846181 mRNA hsa-miR-539 HSBP1 miRanda miRanda
14034 chr16 83949524 83949524 1 + C A rs530020302 83949516 + 83949496 83949536 41 TGTTCCTTTGTGCTCATAAAACAGAATGCGGCGATGGTTGC TGTTCCTTTGTGCTCATAAAACAGAATGAGGCGATGGTTGC < 41bp 1 0.554419008625347 1 0.379931449890137 experiment 0.891161982749306 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 29 MLYCD ENSG00000103150 UTR3 Human protein_coding chr16:83949516 chr16:83949524 . . 0 hm6A_associated_SNPs_17541 0 0 0 1 83949514 83949538 mRNA hsa-miR-29a MLYCD miRanda miRanda
14034 chr16 83949536 83949536 1 + C G rs144512526 83949516 + 83949496 83949536 41 TGTTCCTTTGTGCTCATAAAACAGAATGCGGCGATGGTTGC TGTTCCTTTGTGCTCATAAAACAGAATGCGGCGATGGTTGG < 41bp 1 0.586501057213786 1 0.549521088600159 experiment 0.826997885572428 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 41 MLYCD ENSG00000103150 UTR3 Human protein_coding chr16:83949516 chr16:83949536 . . 0 hm6A_associated_SNPs_17542 0 0 1 1 83949514 83949538 mRNA hsa-miR-29a MLYCD miRanda miRanda
14034 chr16 83949554 83949554 1 + A C rs1127387 83949569 + 83949549 83949589 41 TCACCATGCAATGCAGAGGGACAAAGGGCTGTGCTACACTT TCACCCTGCAATGCAGAGGGACAAAGGGCTGTGCTACACTT < 41bp 1 0.733887121487831 1 0.834856629371643 experiment 0.532225757024338 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 MLYCD ENSG00000103150 UTR3 Human protein_coding chr16:83949569 chr16:83949554 . . 0 hm6A_associated_SNPs_17543 1 0 1 2 83949543 83949564 mRNA hsa-miR-33a MLYCD miRanda miRanda
14034 chr16 83949554 83949554 1 + A C rs1127387 83949569 + 83949549 83949589 41 TCACCATGCAATGCAGAGGGACAAAGGGCTGTGCTACACTT TCACCCTGCAATGCAGAGGGACAAAGGGCTGTGCTACACTT < 41bp 1 0.733887121487831 1 0.834856629371643 experiment 0.532225757024338 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 MLYCD ENSG00000103150 UTR3 Human protein_coding chr16:83949569 chr16:83949554 . . 0 hm6A_associated_SNPs_17543 1 0 1 2 83949544 83949564 mRNA hsa-miR-33b MLYCD miRanda miRanda
14034 chr16 84497374 84497374 1 + C A rs200011337 84497387 + 84497367 84497407 41 ATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCT ATCATCTAGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCT < 41bp 1 0.768827464052356 1 0.846071422100067 experiment 0.462345071895288 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 ATP2C2-AS1 ENSG00000261286 ncRNA_intronic Human antisense chr16:84497387 chr16:84497374 . . 0 hm6A_associated_SNPs_17548 0 0 0 1 84497355 84497375 mRNA hsa-miR-143 ATP2C2 miRanda miRanda
14034 chr16 85706301 85706301 1 + T C rs549056642 85706304 + 85706284 85706324 41 GCTCCAGAAAAAATGAATGAACTCACCTTGACGTCAATGCA GCTCCAGAAAAAATGAACGAACTCACCTTGACGTCAATGCA < 41bp 1 0.605407892325497 1 0.984804749488831 experiment 0.789184215349006 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85706304 chr16:85706301 . . 0 hm6A_associated_SNPs_17583 0 0 1 1 85706292 85706312 mRNA hsa-miR-196a KIAA0182 miRanda miRanda
14034 chr16 85706302 85706302 1 + G A rs569278082 85706304 + 85706284 85706324 41 GCTCCAGAAAAAATGAATGAACTCACCTTGACGTCAATGCA GCTCCAGAAAAAATGAATAAACTCACCTTGACGTCAATGCA < 41bp 1 0.509350408337141 1 0.950179696083069 experiment 0.981299183325719 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85706304 chr16:85706302 . . 0 hm6A_associated_SNPs_17584 0 0 1 1 85706292 85706312 mRNA hsa-miR-196a KIAA0182 miRanda miRanda
14034 chr16 85706303 85706303 1 + A C rs537801915 85706304 + 85706284 85706324 41 GCTCCAGAAAAAATGAATGAACTCACCTTGACGTCAATGCA GCTCCAGAAAAAATGAATGCACTCACCTTGACGTCAATGCA Direct Loss 1 0.686230524589146 1 0.944300174713135 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85706304 chr16:85706303 . . 0 hm6A_associated_SNPs_17585 0 0 1 1 85706292 85706312 mRNA hsa-miR-196a KIAA0182 miRanda miRanda
14034 chr16 85942721 85942721 1 + A G rs11545564 85942726 + 85942706 85942746 41 GACGGACCGGTCCCAACTGGACATTTCCGAGCCATACAAAG GACGGACCGGTCCCAGCTGGACATTTCCGAGCCATACAAAG < 41bp 1 0.598784243373018 1 0.981871247291565 experiment 0.802431513253965 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 16 IRF8 ENSG00000140968 CDS Human protein_coding chr16:85942726 chr16:85942721 synonymous SNV . 0 hm6A_associated_SNPs_17593 0 0 1 1 85942707 85942727 mRNA hsa-miR-145 IRF8 miRanda miRanda
14034 chr16 87436796 87436796 1 + A G rs183409203 87436811 + 87436791 87436831 41 ATCCAATCACAGATCATGAAACAGTAGTGTTCCCACCTAGG ATCCAGTCACAGATCATGAAACAGTAGTGTTCCCACCTAGG < 41bp 1 0.458722527019891 1 0.876933455467224 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 MAP1LC3B ENSG00000140941 UTR3 Human protein_coding chr16:87436811 chr16:87436796 . . 0 hm6A_associated_SNPs_17602 0 0 1 1 87436790 87436810 mRNA hsa-miR-433 MAP1LC3B miRanda miRanda
14034 chr16 87436808 87436808 1 + G A rs7865 87436811 + 87436791 87436831 41 ATCCAATCACAGATCATGAAACAGTAGTGTTCCCACCTAGG ATCCAATCACAGATCATAAAACAGTAGTGTTCCCACCTAGG < 41bp 1 0.513438207277624 1 0.82237446308136 experiment 0.973123585444751 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MAP1LC3B ENSG00000140941 UTR3 Human protein_coding chr16:87436811 chr16:87436808 . . 0 hm6A_associated_SNPs_17603 0 0 1 1 87436790 87436810 mRNA hsa-miR-433 MAP1LC3B miRanda miRanda
14034 chr16 87731346 87731346 1 + T C rs569868214 87731356 + 87731336 87731376 41 GGCTTGAAACTTCCTGAGAAACTGTAGCATATCCAGCCCCC GGCTTGAAACCTCCTGAGAAACTGTAGCATATCCAGCCCCC < 41bp 1 0.472937077623311 1 0.883203744888306 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 11 JPH3 ENSG00000154118 UTR3 Human protein_coding chr16:87731356 chr16:87731346 . . 0 hm6A_associated_SNPs_17609 0 0 0 1 87731342 87731363 mRNA hsa-miR-139-5p JPH3 miRanda miRanda
14034 chr16 89211714 89211714 1 + G A rs144681140 89211732 + 89211712 89211752 41 CCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCT CCAAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCT < 41bp 1 0.695909430316229 1 0.974011898040771 experiment 0.608181139367542 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89211732 chr16:89211714 nonsynonymous SNV 0.121 1 hm6A_associated_SNPs_17648 1 0 1 1 89211693 89211715 mRNA hsa-miR-127-3p ACSF3 miRanda miRanda
14034 chr16 89629652 89629652 1 + G A rs111443018 89629655 + 89629635 89629675 41 TGTTGGTTGTTTGGTTAGTGACTGATGTAAAACGGTTTTCT TGTTGGTTGTTTGGTTAATGACTGATGTAAAACGGTTTTCT < 41bp 1 0.358811376757575 1 0.734031081199646 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 18 RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89629655 chr16:89629652 . . 0 hm6A_associated_SNPs_17667 0 0 1 1 89629646 89629672 mRNA hsa-miR-451 RPL13 miRanda miRanda
14034 chr16 89629668 89629668 1 + G A rs188754482 89629655 + 89629635 89629675 41 TGTTGGTTGTTTGGTTAGTGACTGATGTAAAACGGTTTTCT TGTTGGTTGTTTGGTTAGTGACTGATGTAAAACAGTTTTCT < 41bp 1 0.328118941086348 1 0.555829703807831 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 34 RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89629655 chr16:89629668 . . 0 hm6A_associated_SNPs_17668 0 0 1 1 89629646 89629672 mRNA hsa-miR-451 RPL13 miRanda miRanda
14034 chr16 89629819 89629819 1 + G A rs3211569 89629821 + 89629801 89629841 41 AGCCTGGCCAACATGTCAGAACTACTAAAAATAAAGAAATC AGCCTGGCCAACATGTCAAAACTACTAAAAATAAAGAAATC < 41bp 1 0.248383490021442 1 0.178321570158005 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89629821 chr16:89629819 . . 0 hm6A_associated_SNPs_17671 0 0 1 1 89629801 89629822 mRNA hsa-miR-544 RPL13 miRanda miRanda
14034 chr16 89760170 89760170 1 + G A rs558873230 89760172 + 89760152 89760192 41 GAGGGAAGGCTGCTTCACGGACTGAAGGACAGGCAGCTTGC GAGGGAAGGCTGCTTCACAGACTGAAGGACAGGCAGCTTGC < 41bp 1 0.369061305777675 1 0.908353388309479 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 CDK10 ENSG00000185324 intronic Human protein_coding chr16:89760172 chr16:89760170 . . 0 hm6A_associated_SNPs_17683 0 0 1 1 89760169 89760190 mRNA hsa-miR-22 CDK10 miRanda miRanda
14034 chr16 89805719 89805719 1 + C G rs74033848 89805710 + 89805690 89805730 41 AGAGAAGACTAGAGGTAAAGACATAGTGACAAATGGCTACA AGAGAAGACTAGAGGTAAAGACATAGTGAGAAATGGCTACA < 41bp 1 0.656599845459561 1 0.954757332801819 experiment 0.686800309080879 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 ZNF276 ENSG00000158805 UTR3 Human protein_coding chr16:89805710 chr16:89805719 . . 0 hm6A_associated_SNPs_17702 0 0 1 1 89805716 89805740 mRNA hsa-miR-338-3p ZNF276 miRanda miRanda
14034 chr16 89805719 89805719 1 + C G rs74033848 89805718 + 89805698 89805738 41 CTAGAGGTAAAGACATAGTGACAAATGGCTACAGACTGCTG CTAGAGGTAAAGACATAGTGAGAAATGGCTACAGACTGCTG Direct Loss 1 0.688709341404379 1 0.959296941757202 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ZNF276 ENSG00000158805 UTR3 Human protein_coding chr16:89805718 chr16:89805719 . . 0 hm6A_associated_SNPs_17703 0 0 1 1 89805716 89805740 mRNA hsa-miR-338-3p ZNF276 miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644975 644994 mRNA hsa-miR-17 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644966 644994 mRNA hsa-miR-20a FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644975 644994 mRNA hsa-miR-93 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644975 644994 mRNA hsa-miR-106a FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644974 644994 mRNA hsa-miR-106b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644971 644993 mRNA hsa-miR-302a FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644971 644993 mRNA hsa-miR-302b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644971 644993 mRNA hsa-miR-302c FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644971 644993 mRNA hsa-miR-302d FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644971 644993 mRNA hsa-miR-372 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644970 644993 mRNA hsa-miR-373 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644966 644994 mRNA hsa-miR-20b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644973 644993 mRNA hsa-miR-520e FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644972 644993 mRNA hsa-miR-520a-3p FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644975 644993 mRNA hsa-miR-520b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644974 644993 mRNA hsa-miR-520c-3p FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644973 644994 mRNA hsa-miR-519d FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644972 644993 mRNA hsa-miR-520d-3p FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 644968 + 644948 644988 41 CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAAAGC CATATTACCTCCTTCTTCTAACTTGCCCTATTTGCAAACGC < 41bp 1 0.699943046734425 1 0.870991826057434 experiment 0.60011390653115 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644968 chr17:644986 . . 0 hm6A_associated_SNPs_17737 0 0 1 19 644977 644993 mRNA hsa-miR-302e FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644975 644994 mRNA hsa-miR-17 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644966 644994 mRNA hsa-miR-20a FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644975 644994 mRNA hsa-miR-93 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644975 644994 mRNA hsa-miR-106a FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644974 644994 mRNA hsa-miR-106b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644971 644993 mRNA hsa-miR-302a FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644971 644993 mRNA hsa-miR-302b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644971 644993 mRNA hsa-miR-302c FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644971 644993 mRNA hsa-miR-302d FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644971 644993 mRNA hsa-miR-372 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644970 644993 mRNA hsa-miR-373 FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644966 644994 mRNA hsa-miR-20b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644973 644993 mRNA hsa-miR-520e FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644972 644993 mRNA hsa-miR-520a-3p FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644975 644993 mRNA hsa-miR-520b FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644974 644993 mRNA hsa-miR-520c-3p FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644973 644994 mRNA hsa-miR-519d FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644972 644993 mRNA hsa-miR-520d-3p FAM57A miRanda miRanda
14034 chr17 644986 644986 1 + A C rs1064245 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAACGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG < 41bp 1 0.647364802682643 1 0.765610337257385 experiment 0.705270394634715 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:644986 . . 0 hm6A_associated_SNPs_17738 0 0 1 19 644977 644993 mRNA hsa-miR-302e FAM57A miRanda miRanda
14034 chr17 645019 645019 1 + C T rs2644703 645001 + 644981 645021 41 GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTCAG GCAAAAGCACTTTTGTAGTAACAACTATTGGGTCCTGTTAG < 41bp 1 0.678024766513129 1 0.64501690864563 experiment 0.643950466973741 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 39 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645001 chr17:645019 . . 0 hm6A_associated_SNPs_17739 0 0 1 1 645005 645027 mRNA hsa-miR-485-5p FAM57A miRanda miRanda
14034 chr17 645019 645019 1 + C T rs2644703 645022 + 645002 645042 41 CAACTATTGGGTCCTGTCAGACCTCCACGGACAGCAAAGTG CAACTATTGGGTCCTGTTAGACCTCCACGGACAGCAAAGTG < 41bp 1 0.611505383022901 1 0.74053418636322 experiment 0.776989233954199 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645022 chr17:645019 . . 0 hm6A_associated_SNPs_17740 0 0 1 1 645005 645027 mRNA hsa-miR-485-5p FAM57A miRanda miRanda
14034 chr17 645186 645186 1 + A G rs112257043 645187 + 645167 645207 41 AGCGGCTACCCACCTTCCAAACCACTCAGGACAGTACCCGT AGCGGCTACCCACCTTCCAGACCACTCAGGACAGTACCCGT < 41bp 1 0.485654080790925 1 0.515725135803223 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:645187 chr17:645186 . . 0 hm6A_associated_SNPs_17741 0 0 1 1 645172 645193 mRNA hsa-miR-140-5p FAM57A miRanda miRanda
14034 chr17 1658155 1658155 1 + G A rs117803213 1658148 + 1658128 1658168 41 TGCTCCCCACGTCAGCTGGGACACCCCGACTTTTGTTTACC TGCTCCCCACGTCAGCTGGGACACCCCAACTTTTGTTTACC < 41bp 1 0.663549554631501 1 0.0439014434814453 experiment 0.672900890736998 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 28 SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658148 chr17:1658155 . . 0 hm6A_associated_SNPs_17753 0 0 1 5 1658147 1658168 mRNA hsa-miR-30a SERPINF2 miRanda miRanda
14034 chr17 1658155 1658155 1 + G A rs117803213 1658148 + 1658128 1658168 41 TGCTCCCCACGTCAGCTGGGACACCCCGACTTTTGTTTACC TGCTCCCCACGTCAGCTGGGACACCCCAACTTTTGTTTACC < 41bp 1 0.663549554631501 1 0.0439014434814453 experiment 0.672900890736998 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 28 SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658148 chr17:1658155 . . 0 hm6A_associated_SNPs_17753 0 0 1 5 1658146 1658168 mRNA hsa-miR-30c SERPINF2 miRanda miRanda
14034 chr17 1658155 1658155 1 + G A rs117803213 1658148 + 1658128 1658168 41 TGCTCCCCACGTCAGCTGGGACACCCCGACTTTTGTTTACC TGCTCCCCACGTCAGCTGGGACACCCCAACTTTTGTTTACC < 41bp 1 0.663549554631501 1 0.0439014434814453 experiment 0.672900890736998 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 28 SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658148 chr17:1658155 . . 0 hm6A_associated_SNPs_17753 0 0 1 5 1658147 1658168 mRNA hsa-miR-30d SERPINF2 miRanda miRanda
14034 chr17 1658155 1658155 1 + G A rs117803213 1658148 + 1658128 1658168 41 TGCTCCCCACGTCAGCTGGGACACCCCGACTTTTGTTTACC TGCTCCCCACGTCAGCTGGGACACCCCAACTTTTGTTTACC < 41bp 1 0.663549554631501 1 0.0439014434814453 experiment 0.672900890736998 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 28 SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658148 chr17:1658155 . . 0 hm6A_associated_SNPs_17753 0 0 1 5 1658147 1658168 mRNA hsa-miR-30b SERPINF2 miRanda miRanda
14034 chr17 1658155 1658155 1 + G A rs117803213 1658148 + 1658128 1658168 41 TGCTCCCCACGTCAGCTGGGACACCCCGACTTTTGTTTACC TGCTCCCCACGTCAGCTGGGACACCCCAACTTTTGTTTACC < 41bp 1 0.663549554631501 1 0.0439014434814453 experiment 0.672900890736998 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 28 SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658148 chr17:1658155 . . 0 hm6A_associated_SNPs_17753 0 0 1 5 1658147 1658168 mRNA hsa-miR-30e SERPINF2 miRanda miRanda
14034 chr17 1801144 1801144 1 + C T rs17734 1801138 + 1801118 1801158 41 AGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAA AGGACCGCTGATAAGCATTGACTTGCTGTCCCCTAAGGAAA < 41bp 1 0.589417429116342 1 0.61128431558609 experiment 0.821165141767317 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 RPA1 ENSG00000132383 UTR3 Human protein_coding chr17:1801138 chr17:1801144 . . 0 hm6A_associated_SNPs_17773 0 0 1 1 1801141 1801162 mRNA hsa-miR-876-5p RPA1 miRanda miRanda
14034 chr17 1943525 1943525 1 + A G rs200693145 1943545 + 1943525 1943565 41 AGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCAT GGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCAT < 41bp 1 0.79361982375986 1 0.73216038942337 experiment 0.412760352480281 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943545 chr17:1943525 nonsynonymous SNV 0.753 0 hm6A_associated_SNPs_17774 0 0 1 1 1943525 1943544 mRNA hsa-miR-326 DPH1 miRanda miRanda
14034 chr17 2227469 2227469 1 + G A rs140951255 2227470 + 2227450 2227490 41 TACTGACTGGCACCGGTAAGACAGAATCTCTTTGAATCCAT TACTGACTGGCACCGGTAAAACAGAATCTCTTTGAATCCAT < 41bp 1 0.355276194954007 1 0.904535055160522 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 20 SRR;TSR1 ENSG00000167720;ENSG00000167721 UTR3 Human other chr17:2227470 chr17:2227469 . . 0 hm6A_associated_SNPs_17780 0 0 0 1 2227460 2227483 mRNA hsa-miR-186 SRR miRanda miRanda
14034 chr17 2283667 2283667 1 + A G rs60072521 2283654 + 2283634 2283674 41 CTCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCG CTCTGAGGAATCCCAGGGTGACTCTGTCGGGGAGGAATCCG < 41bp 1 0.282773086471944 1 0.883508801460266 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 SGSM2 ENSG00000141258 UTR3 Human protein_coding chr17:2283654 chr17:2283667 . . 0 hm6A_associated_SNPs_17788 0 0 1 1 2283664 2283686 mRNA hsa-miR-485-5p SGSM2 miRanda miRanda
14034 chr17 2283668 2283668 1 + G C rs59348778 2283654 + 2283634 2283674 41 CTCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCG CTCTGAGGAATCCCAGGGTGACTCTGTCGGGGAACAATCCG < 41bp 1 0.260469774916343 1 0.882792353630066 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 SGSM2 ENSG00000141258 UTR3 Human protein_coding chr17:2283654 chr17:2283668 . . 0 hm6A_associated_SNPs_17789 0 0 1 1 2283664 2283686 mRNA hsa-miR-485-5p SGSM2 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541459 2541482 mRNA hsa-miR-302a PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541459 2541482 mRNA hsa-miR-302b PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541459 2541482 mRNA hsa-miR-302c PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541459 2541482 mRNA hsa-miR-302d PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541459 2541482 mRNA hsa-miR-372 PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541459 2541482 mRNA hsa-miR-373 PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541460 2541482 mRNA hsa-miR-520a-3p PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541461 2541482 mRNA hsa-miR-520b PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541460 2541482 mRNA hsa-miR-520c-3p PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541460 2541482 mRNA hsa-miR-520d-3p PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541477 2541502 mRNA hsa-miR-374b PAFAH1B1 miRanda miRanda
14034 chr17 2541480 2541480 1 + T C rs533089397 2541476 + 2541456 2541496 41 CATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAA CATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAA < 41bp 1 0.521982574458962 1 0.100382775068283 experiment 0.956034851082076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541476 chr17:2541480 . . 0 hm6A_associated_SNPs_17790 0 0 1 12 2541465 2541482 mRNA hsa-miR-302e PAFAH1B1 miRanda miRanda
14034 chr17 2588168 2588168 1 + T C rs545489859 2588185 + 2588165 2588205 41 CTCTTTCTGTTTCTGTGTGAACTTTCCCGGTAATATCACTC CTCCTTCTGTTTCTGTGTGAACTTTCCCGGTAATATCACTC < 41bp 1 0.20774428023566 1 0.398375749588013 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 PAFAH1B1 ENSG00000272770 ncRNA_exonic Human antisense chr17:2588185 chr17:2588168 . . 0 hm6A_associated_SNPs_17794 1 0 1 2 2588164 2588185 mRNA hsa-miR-377 PAFAH1B1 miRanda miRanda
14034 chr17 2588168 2588168 1 + T C rs545489859 2588185 + 2588165 2588205 41 CTCTTTCTGTTTCTGTGTGAACTTTCCCGGTAATATCACTC CTCCTTCTGTTTCTGTGTGAACTTTCCCGGTAATATCACTC < 41bp 1 0.20774428023566 1 0.398375749588013 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 PAFAH1B1 ENSG00000272770 ncRNA_exonic Human antisense chr17:2588185 chr17:2588168 . . 0 hm6A_associated_SNPs_17794 1 0 1 2 2588161 2588185 mRNA hsa-miR-421 PAFAH1B1 miRanda miRanda
14034 chr17 3564445 3564445 1 + G A rs373151543 3564454 + 3564434 3564474 41 CCCAGCATCTGGAGTACAGGACATAGCTCTCTCCTGCTACC CCCAGCATCTGAAGTACAGGACATAGCTCTCTCCTGCTACC < 41bp 1 0.709376549513719 1 0.809399247169495 experiment 0.581246900972562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 CTNS ENSG00000040531 UTR3 Human protein_coding chr17:3564454 chr17:3564445 . . 0 hm6A_associated_SNPs_17806 0 0 0 1 3564432 3564454 mRNA hsa-miR-486-5p CTNS miRanda miRanda
14034 chr17 4624500 4624500 1 + A G rs35003453 4624507 + 4624487 4624527 41 CCCCCCAAGATACACACTGGACCCTCTCTTGCTGAATGTGG CCCCCCAAGATACGCACTGGACCCTCTCTTGCTGAATGTGG < 41bp 1 0.706792043325649 1 0.83348536491394 experiment 0.586415913348702 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 14 ARRB2 ENSG00000141480 UTR3 Human protein_coding chr17:4624507 chr17:4624500 . . 0 hm6A_associated_SNPs_17825 0 0 1 2 4624485 4624507 mRNA hsa-miR-199a-5p ARRB2 miRanda miRanda
14034 chr17 4624500 4624500 1 + A G rs35003453 4624507 + 4624487 4624527 41 CCCCCCAAGATACACACTGGACCCTCTCTTGCTGAATGTGG CCCCCCAAGATACGCACTGGACCCTCTCTTGCTGAATGTGG < 41bp 1 0.706792043325649 1 0.83348536491394 experiment 0.586415913348702 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 14 ARRB2 ENSG00000141480 UTR3 Human protein_coding chr17:4624507 chr17:4624500 . . 0 hm6A_associated_SNPs_17825 0 0 1 2 4624485 4624507 mRNA hsa-miR-199b-5p ARRB2 miRanda miRanda
14034 chr17 4801125 4801125 1 + C G rs9914357 4801139 + 4801119 4801159 41 GGGGGACCCCGCCAGCCAAAACATTCCCCCCATTCCCGACC GGGGGAGCCCGCCAGCCAAAACATTCCCCCCATTCCCGACC < 41bp 1 0.708748676380923 1 0.0758513510227203 experiment 0.582502647238153 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 7 CHRNE;MINK1 ENSG00000108556;ENSG00000141503 UTR3 Human other chr17:4801139 chr17:4801125 . . 0 hm6A_associated_SNPs_17839 1 0 1 2 4801125 4801146 mRNA hsa-miR-1 MINK1 miRanda miRanda
14034 chr17 4801125 4801125 1 + C G rs9914357 4801139 + 4801119 4801159 41 GGGGGACCCCGCCAGCCAAAACATTCCCCCCATTCCCGACC GGGGGAGCCCGCCAGCCAAAACATTCCCCCCATTCCCGACC < 41bp 1 0.708748676380923 1 0.0758513510227203 experiment 0.582502647238153 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 7 CHRNE;MINK1 ENSG00000108556;ENSG00000141503 UTR3 Human other chr17:4801139 chr17:4801125 . . 0 hm6A_associated_SNPs_17839 1 0 1 2 4801125 4801146 mRNA hsa-miR-206 MINK1 miRanda miRanda
14034 chr17 4801129 4801129 1 + G A rs369145199 4801139 + 4801119 4801159 41 GGGGGACCCCGCCAGCCAAAACATTCCCCCCATTCCCGACC GGGGGACCCCACCAGCCAAAACATTCCCCCCATTCCCGACC < 41bp 1 0.69175351020007 1 0.0838763117790222 experiment 0.61649297959986 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 11 CHRNE;MINK1 ENSG00000108556;ENSG00000141503 UTR3 Human other chr17:4801139 chr17:4801129 . . 0 hm6A_associated_SNPs_17840 1 0 1 3 4801125 4801146 mRNA hsa-miR-1 MINK1 miRanda miRanda
14034 chr17 4801129 4801129 1 + G A rs369145199 4801139 + 4801119 4801159 41 GGGGGACCCCGCCAGCCAAAACATTCCCCCCATTCCCGACC GGGGGACCCCACCAGCCAAAACATTCCCCCCATTCCCGACC < 41bp 1 0.69175351020007 1 0.0838763117790222 experiment 0.61649297959986 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 11 CHRNE;MINK1 ENSG00000108556;ENSG00000141503 UTR3 Human other chr17:4801139 chr17:4801129 . . 0 hm6A_associated_SNPs_17840 1 0 1 3 4801125 4801146 mRNA hsa-miR-206 MINK1 miRanda miRanda
14034 chr17 4801129 4801129 1 + G A rs369145199 4801139 + 4801119 4801159 41 GGGGGACCCCGCCAGCCAAAACATTCCCCCCATTCCCGACC GGGGGACCCCACCAGCCAAAACATTCCCCCCATTCCCGACC < 41bp 1 0.69175351020007 1 0.0838763117790222 experiment 0.61649297959986 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 11 CHRNE;MINK1 ENSG00000108556;ENSG00000141503 UTR3 Human other chr17:4801139 chr17:4801129 . . 0 hm6A_associated_SNPs_17840 1 0 1 3 4801129 4801146 mRNA hsa-miR-613 MINK1 miRanda miRanda
14034 chr17 4805389 4805389 1 + G A rs72835059 4805369 + 4805349 4805389 41 GGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGG GGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGA < 41bp 1 0.476064507392482 1 0.996965706348419 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 C17orf107 ENSG00000205710 UTR3 Human protein_coding chr17:4805369 chr17:4805389 . . 0 hm6A_associated_SNPs_17841 2 0 1 1 4805373 4805395 mRNA hsa-miR-615-3p C17orf107 miRanda miRanda
14034 chr17 5286699 5286699 1 + A G rs573393727 5286714 + 5286694 5286734 41 GGGTGATCTGCAGCCCAGAGACCTTCAAATGCGAACACTAT GGGTGGTCTGCAGCCCAGAGACCTTCAAATGCGAACACTAT < 41bp 1 0.763931420310842 1 0.974056720733643 experiment 0.472137159378316 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 6 RABEP1 ENSG00000029725 UTR3 Human protein_coding chr17:5286714 chr17:5286699 . . 0 hm6A_associated_SNPs_17852 0 0 1 2 5286694 5286714 mRNA hsa-miR-330-5p RABEP1 miRanda miRanda
14034 chr17 5286699 5286699 1 + A G rs573393727 5286714 + 5286694 5286734 41 GGGTGATCTGCAGCCCAGAGACCTTCAAATGCGAACACTAT GGGTGGTCTGCAGCCCAGAGACCTTCAAATGCGAACACTAT < 41bp 1 0.763931420310842 1 0.974056720733643 experiment 0.472137159378316 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 6 RABEP1 ENSG00000029725 UTR3 Human protein_coding chr17:5286714 chr17:5286699 . . 0 hm6A_associated_SNPs_17852 0 0 1 2 5286695 5286714 mRNA hsa-miR-326 RABEP1 miRanda miRanda
14034 chr17 5393504 5393504 1 + A G rs115296222 5393524 + 5393504 5393544 41 AGAAGCATGTAGCAAAAAAGACAACCTTGATCTTTAATAAA GGAAGCATGTAGCAAAAAAGACAACCTTGATCTTTAATAAA < 41bp 1 0.386488750887025 1 0.00546836853027344 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 MIS12 ENSG00000167842 UTR3 Human protein_coding chr17:5393524 chr17:5393504 . . 0 hm6A_associated_SNPs_17864 0 0 1 3 5393504 5393522 mRNA hsa-miR-129-5p MIS12 miRanda miRanda
14034 chr17 5393504 5393504 1 + A G rs115296222 5393524 + 5393504 5393544 41 AGAAGCATGTAGCAAAAAAGACAACCTTGATCTTTAATAAA GGAAGCATGTAGCAAAAAAGACAACCTTGATCTTTAATAAA < 41bp 1 0.386488750887025 1 0.00546836853027344 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 MIS12 ENSG00000167842 UTR3 Human protein_coding chr17:5393524 chr17:5393504 . . 0 hm6A_associated_SNPs_17864 0 0 1 3 5393494 5393517 mRNA hsa-miR-221 MIS12 miRanda miRanda
14034 chr17 5393504 5393504 1 + A G rs115296222 5393524 + 5393504 5393544 41 AGAAGCATGTAGCAAAAAAGACAACCTTGATCTTTAATAAA GGAAGCATGTAGCAAAAAAGACAACCTTGATCTTTAATAAA < 41bp 1 0.386488750887025 1 0.00546836853027344 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 MIS12 ENSG00000167842 UTR3 Human protein_coding chr17:5393524 chr17:5393504 . . 0 hm6A_associated_SNPs_17864 0 0 1 3 5393493 5393517 mRNA hsa-miR-222 MIS12 miRanda miRanda
14034 chr17 6027213 6027213 1 + C T rs192621561 6027201 + 6027181 6027221 41 GCTCTTATCTGCCATCTTGGACAAAGCTTTTCCCATCTCCA GCTCTTATCTGCCATCTTGGACAAAGCTTTTCTCATCTCCA < 41bp 1 0.294102016372052 1 0.0138636827468872 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 WSCD1 ENSG00000179314 UTR3 Human protein_coding chr17:6027201 chr17:6027213 . . 0 hm6A_associated_SNPs_17874 0 0 1 1 6027207 6027229 mRNA hsa-miR-422a WSCD1 miRanda miRanda
14034 chr17 6547728 6547728 1 - A G rs185003770 6547723 - 6547703 6547743 41 ATTTCTTTTGTACAGTGAAGACAAAAAAAATGAAAACTCTT ATTTCTTTTGTACAGCGAAGACAAAAAAAATGAAAACTCTT < 41bp 1 0.794123675536735 1 0.0783410966396332 experiment 0.411752648926529 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 MED31;TXNDC17 ENSG00000108590;ENSG00000129235 UTR3 Human other chr17:6547723 chr17:6547728 . . 0 hm6A_associated_SNPs_17877 0 0 1 1 6547716 6547736 mRNA hsa-miR-129-5p MED31 miRanda miRanda
14034 chr17 6678781 6678781 1 + C T rs147145750 6678791 + 6678771 6678811 41 GATTATTTTCCCTCTTTCGAACAAAGACATTGGTTTGCCCA GATTATTTTCTCTCTTTCGAACAAAGACATTGGTTTGCCCA < 41bp 1 0.153123617970795 1 0.962166309356689 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 XAF1 ENSG00000132530 UTR3 Human protein_coding chr17:6678791 chr17:6678781 . . 0 hm6A_associated_SNPs_17883 0 0 0 1 6678774 6678795 mRNA hsa-miR-375 XAF1 miRanda miRanda
14034 chr17 6678781 6678781 1 + C T rs147145750 6678797 + 6678777 6678817 41 TTTCCCTCTTTCGAACAAAGACATTGGTTTGCCCAAGGACT TTTCTCTCTTTCGAACAAAGACATTGGTTTGCCCAAGGACT < 41bp 1 0.155081731502951 1 0.975268006324768 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 XAF1 ENSG00000132530 UTR3 Human protein_coding chr17:6678797 chr17:6678781 . . 0 hm6A_associated_SNPs_17884 0 0 0 1 6678774 6678795 mRNA hsa-miR-375 XAF1 miRanda miRanda
14034 chr17 6920769 6920769 1 + C G rs372804156 6920787 + 6920767 6920807 41 ATCTGCCCCCAACCCCTTTGACCTTCATCTGATGGACATTT ATGTGCCCCCAACCCCTTTGACCTTCATCTGATGGACATTT < 41bp 1 0.124989509913986 1 0.661205768585205 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 RNASEK-C17orf49 ENSG00000267532 ncRNA_exonic Human antisense chr17:6920787 chr17:6920769 . . 0 hm6A_associated_SNPs_17888 0 0 1 1 6920752 6920774 mRNA hsa-miR-34a C17orf49 miRanda miRanda
14034 chr17 7322215 7322215 1 + A G rs116304706 7322218 + 7322198 7322238 41 AGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAA AGGTGGATTTGAGCGGAGAGACTCCCAAAATGTGCCAAGAA < 41bp 1 0.495092194911167 1 0.116253256797791 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 NLGN2 ENSG00000169992 UTR3 Human protein_coding chr17:7322218 chr17:7322215 . . 0 hm6A_associated_SNPs_17910 0 0 1 2 7322214 7322236 mRNA hsa-miR-96 NLGN2 miRanda miRanda
14034 chr17 7322215 7322215 1 + A G rs116304706 7322218 + 7322198 7322238 41 AGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAA AGGTGGATTTGAGCGGAGAGACTCCCAAAATGTGCCAAGAA < 41bp 1 0.495092194911167 1 0.116253256797791 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 NLGN2 ENSG00000169992 UTR3 Human protein_coding chr17:7322218 chr17:7322215 . . 0 hm6A_associated_SNPs_17910 0 0 1 2 7322215 7322236 mRNA hsa-miR-1271 NLGN2 miRanda miRanda
14034 chr17 7481978 7481978 1 + C A rs186194028 7481959 + 7481939 7481979 41 GGCAAAAGAAGGAACCGTGAACATTTTAGACACCCTTTTCT GGCAAAAGAAGGAACCGTGAACATTTTAGACACCCTTTTAT < 41bp 1 0.645474283717779 1 0.503921031951904 experiment 0.709051432564443 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 40 SENP3-EIF4A1 ENSG00000264772;ENSG00000265500 ncRNA_exonic Human other chr17:7481959 chr17:7481978 . . 0 hm6A_associated_SNPs_17933 0 0 1 1 7481973 7481996 mRNA hsa-miR-335 EIF4A1 miRanda miRanda
14034 chr17 7481978 7481978 1 + C A rs186194028 7481968 + 7481948 7481988 41 AGGAACCGTGAACATTTTAGACACCCTTTTCTTTGGGGTAG AGGAACCGTGAACATTTTAGACACCCTTTTATTTGGGGTAG < 41bp 1 0.505853056028822 1 0.454076588153839 experiment 0.988293887942356 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 SENP3-EIF4A1 ENSG00000264772;ENSG00000265500 ncRNA_exonic Human other chr17:7481968 chr17:7481978 . . 0 hm6A_associated_SNPs_17934 0 0 1 1 7481973 7481996 mRNA hsa-miR-335 EIF4A1 miRanda miRanda
14034 chr17 7482125 7482125 1 + A C rs3809719 7482122 + 7482102 7482142 41 CTTTGAAAGTGATTCAAGGGACTATGTCACTCAGCCTCATT CTTTGAAAGTGATTCAAGGGACTCTGTCACTCAGCCTCATT < 41bp 1 0.605875119006682 1 0.948835968971252 experiment 0.788249761986637 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 SENP3-EIF4A1 ENSG00000264772 ncRNA_exonic Human processed_transcript chr17:7482122 chr17:7482125 . . 0 hm6A_associated_SNPs_17935 0 0 1 1 7482121 7482140 mRNA hsa-miR-485-5p EIF4A1 miRanda miRanda
14034 chr17 7485339 7485339 1 + C A rs568475665 7485326 + 7485306 7485346 41 AATTTTATTAAATGTGACGAACTGCCCCCCCCCCCCCCCCA AATTTTATTAAATGTGACGAACTGCCCCCCCCCACCCCCCA < 41bp 1 0.14814217286955 1 0.75495433807373 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 34 CD68;LOC100996842 ENSG00000233223;ENSG00000264772 ncRNA_exonic Human other chr17:7485326 chr17:7485339 . . 0 hm6A_associated_SNPs_17937 0 0 0 1 7485331 7485352 mRNA hsa-miR-370 CD68 miRanda miRanda
14034 chr17 7491521 7491521 1 + C T rs554187980 7491510 + 7491490 7491530 41 ACTCAGTTGAATAATACAAAACTGTTTAATACTACCAAAAA ACTCAGTTGAATAATACAAAACTGTTTAATATTACCAAAAA < 41bp 1 0.0965344765335197 1 0.07901930809021 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 MPDU1;SOX15 ENSG00000129194 UTR3 Human protein_coding chr17:7491510 chr17:7491521 . . 0 hm6A_associated_SNPs_17939 0 0 1 2 7491506 7491525 mRNA hsa-miR-196a MPDU1 miRanda miRanda
14034 chr17 7491521 7491521 1 + C T rs554187980 7491510 + 7491490 7491530 41 ACTCAGTTGAATAATACAAAACTGTTTAATACTACCAAAAA ACTCAGTTGAATAATACAAAACTGTTTAATATTACCAAAAA < 41bp 1 0.0965344765335197 1 0.07901930809021 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 MPDU1;SOX15 ENSG00000129194 UTR3 Human protein_coding chr17:7491510 chr17:7491521 . . 0 hm6A_associated_SNPs_17939 0 0 1 2 7491504 7491525 mRNA hsa-miR-196b MPDU1 miRanda miRanda
14034 chr17 8172723 8172723 1 + G A rs548921786 8172725 + 8172705 8172745 41 AAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGA AAATGCCAAAATCTCAGCAGACTCGATAATCTGCCTGCTGA < 41bp 1 0.732469812538051 1 0.946246027946472 experiment 0.535060374923899 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 PFAS ENSG00000178921 UTR3 Human protein_coding chr17:8172725 chr17:8172723 . . 0 hm6A_associated_SNPs_17962 0 0 1 2 8172720 8172744 mRNA hsa-miR-15a PFAS miRanda miRanda
14034 chr17 8172723 8172723 1 + G A rs548921786 8172725 + 8172705 8172745 41 AAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGA AAATGCCAAAATCTCAGCAGACTCGATAATCTGCCTGCTGA < 41bp 1 0.732469812538051 1 0.946246027946472 experiment 0.535060374923899 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 PFAS ENSG00000178921 UTR3 Human protein_coding chr17:8172725 chr17:8172723 . . 0 hm6A_associated_SNPs_17962 0 0 1 2 8172722 8172744 mRNA hsa-miR-15b PFAS miRanda miRanda
14034 chr17 9632356 9632356 1 + A G rs144399251 9632347 + 9632327 9632367 41 GTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGG GTGACGCTGGCATTCTTGGGACTTTGCCAGGCAACTGTAGG < 41bp 1 0.563317258357147 1 0.891211986541748 experiment 0.873365483285707 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 30 USP43 ENSG00000154914 UTR3 Human protein_coding chr17:9632347 chr17:9632356 . . 0 hm6A_associated_SNPs_17977 0 0 0 2 9632349 9632373 mRNA hsa-miR-22 USP43 miRanda miRanda
14034 chr17 9632356 9632356 1 + A G rs144399251 9632347 + 9632327 9632367 41 GTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGG GTGACGCTGGCATTCTTGGGACTTTGCCAGGCAACTGTAGG < 41bp 1 0.563317258357147 1 0.891211986541748 experiment 0.873365483285707 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 30 USP43 ENSG00000154914 UTR3 Human protein_coding chr17:9632347 chr17:9632356 . . 0 hm6A_associated_SNPs_17977 0 0 0 2 9632334 9632357 mRNA hsa-miR-182 USP43 miRanda miRanda
14034 chr17 10608518 10608518 1 + T G rs34940296 10608516 + 10608496 10608536 41 GCATCCAAAAAGTCCCTAGAACTTGTTATGGACATGTTCAA GCATCCAAAAAGTCCCTAGAACGTGTTATGGACATGTTCAA Direct Loss 1 0.683971025351785 1 0.98187381029129 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608516 chr17:10608518 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_17979 0 0 0 2 10608514 10608536 mRNA hsa-miR-203 C17orf48 miRanda miRanda
14034 chr17 10608518 10608518 1 + T G rs34940296 10608516 + 10608496 10608536 41 GCATCCAAAAAGTCCCTAGAACTTGTTATGGACATGTTCAA GCATCCAAAAAGTCCCTAGAACGTGTTATGGACATGTTCAA Direct Loss 1 0.683971025351785 1 0.98187381029129 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608516 chr17:10608518 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_17979 0 0 0 2 10608512 10608534 mRNA hsa-miR-132 C17orf48 miRanda miRanda
14034 chr17 10608529 10608529 1 + A G rs145477522 10608516 + 10608496 10608536 41 GCATCCAAAAAGTCCCTAGAACTTGTTATGGACATGTTCAA GCATCCAAAAAGTCCCTAGAACTTGTTATGGACGTGTTCAA < 41bp 1 0.661887410280118 1 0.984472215175629 experiment 0.676225179439763 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608516 chr17:10608529 nonsynonymous SNV 0.876 1 hm6A_associated_SNPs_17980 0 0 1 2 10608514 10608536 mRNA hsa-miR-203 C17orf48 miRanda miRanda
14034 chr17 10608529 10608529 1 + A G rs145477522 10608516 + 10608496 10608536 41 GCATCCAAAAAGTCCCTAGAACTTGTTATGGACATGTTCAA GCATCCAAAAAGTCCCTAGAACTTGTTATGGACGTGTTCAA < 41bp 1 0.661887410280118 1 0.984472215175629 experiment 0.676225179439763 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608516 chr17:10608529 nonsynonymous SNV 0.876 1 hm6A_associated_SNPs_17980 0 0 1 2 10608512 10608534 mRNA hsa-miR-132 C17orf48 miRanda miRanda
14034 chr17 10608529 10608529 1 + A G rs145477522 10608527 + 10608507 10608547 41 GTCCCTAGAACTTGTTATGGACATGTTCAAGAGGCTTAAAG GTCCCTAGAACTTGTTATGGACGTGTTCAAGAGGCTTAAAG Direct Loss 1 0.788757748586791 1 0.988378405570984 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608527 chr17:10608529 nonsynonymous SNV 0.876 1 hm6A_associated_SNPs_17981 0 0 1 2 10608514 10608536 mRNA hsa-miR-203 C17orf48 miRanda miRanda
14034 chr17 10608529 10608529 1 + A G rs145477522 10608527 + 10608507 10608547 41 GTCCCTAGAACTTGTTATGGACATGTTCAAGAGGCTTAAAG GTCCCTAGAACTTGTTATGGACGTGTTCAAGAGGCTTAAAG Direct Loss 1 0.788757748586791 1 0.988378405570984 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608527 chr17:10608529 nonsynonymous SNV 0.876 1 hm6A_associated_SNPs_17981 0 0 1 2 10608512 10608534 mRNA hsa-miR-132 C17orf48 miRanda miRanda
14034 chr17 10609852 10609852 1 + A G rs116139089 10609842 + 10609822 10609862 41 TGAAGTGCTAACATTCTCTGACACAAACCAAGAAAAGGTGG TGAAGTGCTAACATTCTCTGACACAAACCAGGAAAAGGTGG < 41bp 1 0.641413887693162 1 0.0110090970993042 experiment 0.717172224613676 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10609842 chr17:10609852 synonymous SNV . 0 hm6A_associated_SNPs_17982 0 0 1 1 10609845 10609866 mRNA hsa-miR-197 C17orf48 miRanda miRanda
14034 chr17 12045905 12045905 1 + G A rs4792219 12045897 + 12045877 12045917 41 AAGAGGCATCTTTTCTAGAGACACATTGGACCAGATGAGGA AAGAGGCATCTTTTCTAGAGACACATTGAACCAGATGAGGA < 41bp 1 0.424809350741413 1 0.0217030942440033 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12045897 chr17:12045905 . . 0 hm6A_associated_SNPs_17983 0 0 1 1 12045899 12045922 mRNA hsa-miR-127-3p MAP2K4 miRanda miRanda
14034 chr17 12046294 12046294 1 + A G rs553603101 12046291 + 12046271 12046311 41 ACAGTCATAAATACTGTCAAACAATAAAGGGAGAATGGTGC ACAGTCATAAATACTGTCAAACAGTAAAGGGAGAATGGTGC < 41bp 1 0.46387286673197 1 0.360389709472656 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 24 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046291 chr17:12046294 . . 0 hm6A_associated_SNPs_17984 0 0 1 5 12046291 12046313 mRNA hsa-miR-29a MAP2K4 miRanda miRanda
14034 chr17 12046294 12046294 1 + A G rs553603101 12046291 + 12046271 12046311 41 ACAGTCATAAATACTGTCAAACAATAAAGGGAGAATGGTGC ACAGTCATAAATACTGTCAAACAGTAAAGGGAGAATGGTGC < 41bp 1 0.46387286673197 1 0.360389709472656 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 24 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046291 chr17:12046294 . . 0 hm6A_associated_SNPs_17984 0 0 1 5 12046291 12046313 mRNA hsa-miR-29b MAP2K4 miRanda miRanda
14034 chr17 12046294 12046294 1 + A G rs553603101 12046291 + 12046271 12046311 41 ACAGTCATAAATACTGTCAAACAATAAAGGGAGAATGGTGC ACAGTCATAAATACTGTCAAACAGTAAAGGGAGAATGGTGC < 41bp 1 0.46387286673197 1 0.360389709472656 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 24 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046291 chr17:12046294 . . 0 hm6A_associated_SNPs_17984 0 0 1 5 12046282 12046303 mRNA hsa-miR-204 MAP2K4 miRanda miRanda
14034 chr17 12046294 12046294 1 + A G rs553603101 12046291 + 12046271 12046311 41 ACAGTCATAAATACTGTCAAACAATAAAGGGAGAATGGTGC ACAGTCATAAATACTGTCAAACAGTAAAGGGAGAATGGTGC < 41bp 1 0.46387286673197 1 0.360389709472656 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 24 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046291 chr17:12046294 . . 0 hm6A_associated_SNPs_17984 0 0 1 5 12046282 12046303 mRNA hsa-miR-211 MAP2K4 miRanda miRanda
14034 chr17 12046294 12046294 1 + A G rs553603101 12046291 + 12046271 12046311 41 ACAGTCATAAATACTGTCAAACAATAAAGGGAGAATGGTGC ACAGTCATAAATACTGTCAAACAGTAAAGGGAGAATGGTGC < 41bp 1 0.46387286673197 1 0.360389709472656 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 24 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046291 chr17:12046294 . . 0 hm6A_associated_SNPs_17984 0 0 1 5 12046292 12046313 mRNA hsa-miR-29c MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046755 + 12046735 12046775 41 AGGGTGTATAGTGTTCACAAACTGTGAAAATAGTGTAAGAA AGGGTGTATAGTGTTCACAAACTGGGAAAATAGTGTAAGAA < 41bp 1 0.34383603329293 1 0.647375762462616 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046755 chr17:12046759 . . 0 hm6A_associated_SNPs_17985 0 0 1 4 12046742 12046762 mRNA hsa-miR-27a MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046755 + 12046735 12046775 41 AGGGTGTATAGTGTTCACAAACTGTGAAAATAGTGTAAGAA AGGGTGTATAGTGTTCACAAACTGGGAAAATAGTGTAAGAA < 41bp 1 0.34383603329293 1 0.647375762462616 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046755 chr17:12046759 . . 0 hm6A_associated_SNPs_17985 0 0 1 4 12046758 12046782 mRNA hsa-miR-139-5p MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046755 + 12046735 12046775 41 AGGGTGTATAGTGTTCACAAACTGTGAAAATAGTGTAAGAA AGGGTGTATAGTGTTCACAAACTGGGAAAATAGTGTAAGAA < 41bp 1 0.34383603329293 1 0.647375762462616 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046755 chr17:12046759 . . 0 hm6A_associated_SNPs_17985 0 0 1 4 12046742 12046762 mRNA hsa-miR-27b MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046755 + 12046735 12046775 41 AGGGTGTATAGTGTTCACAAACTGTGAAAATAGTGTAAGAA AGGGTGTATAGTGTTCACAAACTGGGAAAATAGTGTAAGAA < 41bp 1 0.34383603329293 1 0.647375762462616 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046755 chr17:12046759 . . 0 hm6A_associated_SNPs_17985 0 0 1 4 12046741 12046761 mRNA hsa-miR-128 MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046775 + 12046755 12046795 41 ACTGTGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG ACTGGGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG < 41bp 1 0.49037253360925 1 0.445803552865982 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046775 chr17:12046759 . . 0 hm6A_associated_SNPs_17986 0 0 1 4 12046742 12046762 mRNA hsa-miR-27a MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046775 + 12046755 12046795 41 ACTGTGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG ACTGGGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG < 41bp 1 0.49037253360925 1 0.445803552865982 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046775 chr17:12046759 . . 0 hm6A_associated_SNPs_17986 0 0 1 4 12046758 12046782 mRNA hsa-miR-139-5p MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046775 + 12046755 12046795 41 ACTGTGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG ACTGGGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG < 41bp 1 0.49037253360925 1 0.445803552865982 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046775 chr17:12046759 . . 0 hm6A_associated_SNPs_17986 0 0 1 4 12046742 12046762 mRNA hsa-miR-27b MAP2K4 miRanda miRanda
14034 chr17 12046759 12046759 1 + T G rs146989618 12046775 + 12046755 12046795 41 ACTGTGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG ACTGGGAAAATAGTGTAAGAACTGTACATTGTGAGCTCTGG < 41bp 1 0.49037253360925 1 0.445803552865982 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 MAP2K4 ENSG00000065559 UTR3 Human protein_coding chr17:12046775 chr17:12046759 . . 0 hm6A_associated_SNPs_17986 0 0 1 4 12046741 12046761 mRNA hsa-miR-128 MAP2K4 miRanda miRanda
14034 chr17 14111797 14111797 1 + A G rs75844637 14111817 + 14111797 14111837 41 AAAGGGATTGTAGGTAGATAACATCCAATCACTGTTTGCAC GAAGGGATTGTAGGTAGATAACATCCAATCACTGTTTGCAC < 41bp 1 0.166034314860786 1 0.00395616888999939 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 1 COX10 ENSG00000006695 UTR3 Human protein_coding chr17:14111817 chr17:14111797 . . 0 hm6A_associated_SNPs_17997 0 0 1 2 14111782 14111804 mRNA hsa-miR-204 COX10 miRanda miRanda
14034 chr17 14111797 14111797 1 + A G rs75844637 14111817 + 14111797 14111837 41 AAAGGGATTGTAGGTAGATAACATCCAATCACTGTTTGCAC GAAGGGATTGTAGGTAGATAACATCCAATCACTGTTTGCAC < 41bp 1 0.166034314860786 1 0.00395616888999939 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 1 COX10 ENSG00000006695 UTR3 Human protein_coding chr17:14111817 chr17:14111797 . . 0 hm6A_associated_SNPs_17997 0 0 1 2 14111782 14111804 mRNA hsa-miR-211 COX10 miRanda miRanda
14034 chr17 15879002 15879002 1 + C G rs566643808 15878990 + 15878970 15879010 41 TTTACTGTGAAACAGTGTGAACTATTATAATGCAAATACTT TTTACTGTGAAACAGTGTGAACTATTATAATGGAAATACTT < 41bp 1 0.109290529123598 1 0.642412781715393 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 ADORA2B ENSG00000170425 UTR3 Human protein_coding chr17:15878990 chr17:15879002 . . 0 hm6A_associated_SNPs_18004 0 0 1 3 15878980 15879004 mRNA hsa-miR-33a ADORA2B miRanda miRanda
14034 chr17 15879002 15879002 1 + C G rs566643808 15878990 + 15878970 15879010 41 TTTACTGTGAAACAGTGTGAACTATTATAATGCAAATACTT TTTACTGTGAAACAGTGTGAACTATTATAATGGAAATACTT < 41bp 1 0.109290529123598 1 0.642412781715393 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 ADORA2B ENSG00000170425 UTR3 Human protein_coding chr17:15878990 chr17:15879002 . . 0 hm6A_associated_SNPs_18004 0 0 1 3 15878990 15879011 mRNA hsa-miR-496 ADORA2B miRanda miRanda
14034 chr17 15879002 15879002 1 + C G rs566643808 15878990 + 15878970 15879010 41 TTTACTGTGAAACAGTGTGAACTATTATAATGCAAATACTT TTTACTGTGAAACAGTGTGAACTATTATAATGGAAATACTT < 41bp 1 0.109290529123598 1 0.642412781715393 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 ADORA2B ENSG00000170425 UTR3 Human protein_coding chr17:15878990 chr17:15879002 . . 0 hm6A_associated_SNPs_18004 0 0 1 3 15878981 15879004 mRNA hsa-miR-33b ADORA2B miRanda miRanda
14034 chr17 16229232 16229232 1 + A G rs15739 16229241 + 16229221 16229261 41 AGGGTTTTCAGATCCAAGGAACAAAGGGGAAAATAGACAAA AGGGTTTTCAGGTCCAAGGAACAAAGGGGAAAATAGACAAA < 41bp 1 0.456554869115876 1 0.86239093542099 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PIGL ENSG00000108474 UTR3 Human protein_coding chr17:16229241 chr17:16229232 . . 0 hm6A_associated_SNPs_18011 1 1 1 2 16229232 16229250 mRNA hsa-miR-204 PIGL miRanda miRanda
14034 chr17 16229232 16229232 1 + A G rs15739 16229241 + 16229221 16229261 41 AGGGTTTTCAGATCCAAGGAACAAAGGGGAAAATAGACAAA AGGGTTTTCAGGTCCAAGGAACAAAGGGGAAAATAGACAAA < 41bp 1 0.456554869115876 1 0.86239093542099 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PIGL ENSG00000108474 UTR3 Human protein_coding chr17:16229241 chr17:16229232 . . 0 hm6A_associated_SNPs_18011 1 1 1 2 16229231 16229250 mRNA hsa-miR-211 PIGL miRanda miRanda
14034 chr17 16344747 16344747 1 + T A rs139682550 16344745 + 16344725 16344765 41 CATCAGTTTGGATTCTGAAAACTAACTGGCATCAACACTGG CATCAGTTTGGATTCTGAAAACAAACTGGCATCAACACTGG < 41bp 1 0.320049324608453 1 0.785635471343994 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344745 chr17:16344747 . . 0 hm6A_associated_SNPs_18019 0 0 1 2 16344744 16344766 mRNA hsa-miR-199a-5p NCRNA00188 miRanda miRanda
14034 chr17 16344747 16344747 1 + T A rs139682550 16344745 + 16344725 16344765 41 CATCAGTTTGGATTCTGAAAACTAACTGGCATCAACACTGG CATCAGTTTGGATTCTGAAAACAAACTGGCATCAACACTGG < 41bp 1 0.320049324608453 1 0.785635471343994 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344745 chr17:16344747 . . 0 hm6A_associated_SNPs_18019 0 0 1 2 16344744 16344766 mRNA hsa-miR-199b-5p NCRNA00188 miRanda miRanda
14034 chr17 16344747 16344747 1 + T A rs139682550 16344749 + 16344729 16344769 41 AGTTTGGATTCTGAAAACTAACTGGCATCAACACTGGGTGT AGTTTGGATTCTGAAAACAAACTGGCATCAACACTGGGTGT < 41bp 1 0.310610926199683 1 0.868936777114868 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344749 chr17:16344747 . . 0 hm6A_associated_SNPs_18020 0 0 1 2 16344744 16344766 mRNA hsa-miR-199a-5p NCRNA00188 miRanda miRanda
14034 chr17 16344747 16344747 1 + T A rs139682550 16344749 + 16344729 16344769 41 AGTTTGGATTCTGAAAACTAACTGGCATCAACACTGGGTGT AGTTTGGATTCTGAAAACAAACTGGCATCAACACTGGGTGT < 41bp 1 0.310610926199683 1 0.868936777114868 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344749 chr17:16344747 . . 0 hm6A_associated_SNPs_18020 0 0 1 2 16344744 16344766 mRNA hsa-miR-199b-5p NCRNA00188 miRanda miRanda
14034 chr17 17396298 17396298 1 + T G rs572260541 17396288 + 17396268 17396308 41 TACCTTGGGACTGTTATTTAACTGAATCAGTTATTTCCTTG TACCTTGGGACTGTTATTTAACTGAATCAGGTATTTCCTTG < 41bp 1 0.370229444817928 1 0.719091176986694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 MED9 ENSG00000141026 UTR3 Human protein_coding chr17:17396288 chr17:17396298 . . 0 hm6A_associated_SNPs_18051 0 0 1 1 17396280 17396303 mRNA hsa-miR-429 MED9 miRanda miRanda
14034 chr17 17969592 17969592 1 + G A rs111921390 17969576 + 17969556 17969596 41 TTATAGTGCTCAACACAAGAACTGTTTTTGGGGCCAGTTTA TTATAGTGCTCAACACAAGAACTGTTTTTGGGGCCAATTTA < 41bp 1 0.255123747558175 1 0.893546342849731 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 GID4 ENSG00000141034 UTR3 Human protein_coding chr17:17969576 chr17:17969592 . . 0 hm6A_associated_SNPs_18058 0 0 1 2 17969574 17969594 mRNA hsa-miR-193a-3p C17orf39 miRanda miRanda
14034 chr17 17969592 17969592 1 + G A rs111921390 17969576 + 17969556 17969596 41 TTATAGTGCTCAACACAAGAACTGTTTTTGGGGCCAGTTTA TTATAGTGCTCAACACAAGAACTGTTTTTGGGGCCAATTTA < 41bp 1 0.255123747558175 1 0.893546342849731 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 GID4 ENSG00000141034 UTR3 Human protein_coding chr17:17969576 chr17:17969592 . . 0 hm6A_associated_SNPs_18058 0 0 1 2 17969573 17969594 mRNA hsa-miR-193b C17orf39 miRanda miRanda
14034 chr17 17971495 17971495 1 + G A rs73979257 17971482 + 17971462 17971502 41 TTTAAAAAGAAATGCCATTAACTGTGTTGTATCGTGGTTTA TTTAAAAAGAAATGCCATTAACTGTGTTGTATCATGGTTTA < 41bp 1 0.0516389986631254 1 0.17964431643486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 GID4 ENSG00000141034 UTR3 Human protein_coding chr17:17971482 chr17:17971495 . . 0 hm6A_associated_SNPs_18059 0 0 1 1 17971489 17971508 mRNA hsa-miR-590-3p C17orf39 miRanda miRanda
14034 chr17 18010652 18010652 1 + G A rs147901932 18010632 + 18010612 18010652 41 TGGGACACACAAACACCCAAACAGAAAAATACAAATACACG TGGGACACACAAACACCCAAACAGAAAAATACAAATACACA < 41bp 1 0.537263775881077 1 0.687305152416229 experiment 0.925472448237846 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 DRG2 ENSG00000108591 UTR3 Human protein_coding chr17:18010632 chr17:18010652 . . 0 hm6A_associated_SNPs_18060 0 0 1 1 18010632 18010656 mRNA hsa-miR-142-3p DRG2 miRanda miRanda
14034 chr17 18113108 18113108 1 + T C rs148102367 18113101 + 18113081 18113121 41 AGCCCCTCTCAGGGGCCAGAACTCCTTTGCCAGCGTGGATT AGCCCCTCTCAGGGGCCAGAACTCCTTCGCCAGCGTGGATT < 41bp 1 0.299077278194056 1 0.703219175338745 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 ALKBH5 ENSG00000091542 UTR3 Human protein_coding chr17:18113101 chr17:18113108 . . 0 hm6A_associated_SNPs_18063 0 0 1 1 18113105 18113126 mRNA hsa-miR-539 ALKBH5 miRanda miRanda
14034 chr17 18147879 18147879 1 + G A rs552437407 18147890 + 18147870 18147910 41 TTTTCTAGCGCCTGGGCTGGACAGTTGTTTCTAAAACTAAA TTTTCTAGCACCTGGGCTGGACAGTTGTTTCTAAAACTAAA < 41bp 1 0.479016092860176 1 0.198899954557419 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 10 LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147890 chr17:18147879 . . 0 hm6A_associated_SNPs_18065 0 0 1 2 18147877 18147899 mRNA hsa-miR-141 LLGL1 miRanda miRanda
14034 chr17 18147879 18147879 1 + G A rs552437407 18147890 + 18147870 18147910 41 TTTTCTAGCGCCTGGGCTGGACAGTTGTTTCTAAAACTAAA TTTTCTAGCACCTGGGCTGGACAGTTGTTTCTAAAACTAAA < 41bp 1 0.479016092860176 1 0.198899954557419 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 10 LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147890 chr17:18147879 . . 0 hm6A_associated_SNPs_18065 0 0 1 2 18147877 18147899 mRNA hsa-miR-200a LLGL1 miRanda miRanda
14034 chr17 18147896 18147896 1 + G A rs115065254 18147890 + 18147870 18147910 41 TTTTCTAGCGCCTGGGCTGGACAGTTGTTTCTAAAACTAAA TTTTCTAGCGCCTGGGCTGGACAGTTATTTCTAAAACTAAA < 41bp 1 0.452240493993163 1 0.108179032802582 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 27 LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147890 chr17:18147896 . . 0 hm6A_associated_SNPs_18066 0 0 1 2 18147877 18147899 mRNA hsa-miR-141 LLGL1 miRanda miRanda
14034 chr17 18147896 18147896 1 + G A rs115065254 18147890 + 18147870 18147910 41 TTTTCTAGCGCCTGGGCTGGACAGTTGTTTCTAAAACTAAA TTTTCTAGCGCCTGGGCTGGACAGTTATTTCTAAAACTAAA < 41bp 1 0.452240493993163 1 0.108179032802582 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 27 LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147890 chr17:18147896 . . 0 hm6A_associated_SNPs_18066 0 0 1 2 18147877 18147899 mRNA hsa-miR-200a LLGL1 miRanda miRanda
14034 chr17 18227818 18227818 1 + A G rs374187171 18227822 + 18227802 18227842 41 CAAAAATTATGCTGAAATGGACCTGAATCAGCCCTGGGTGT CAAAAATTATGCTGAAGTGGACCTGAATCAGCCCTGGGTGT < 41bp 1 0.525286228809132 1 0.96436995267868 experiment 0.949427542381736 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 17 SMCR8 ENSG00000267350 ncRNA_exonic Human other chr17:18227822 chr17:18227818 . . 0 hm6A_associated_SNPs_18075 0 0 1 1 18227809 18227830 lncRNA hsa-miR-506-5p RP1-178F10.3 miRanda starBase2
14034 chr17 18709409 18709409 1 + G A rs368032007 18709427 + 18709407 18709447 41 ACGTATGCAAGCAAGTGAAAACAATTAGGGCCAGTGGTATT ACATATGCAAGCAAGTGAAAACAATTAGGGCCAGTGGTATT < 41bp 1 0.486650364593608 1 0.0623600780963898 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 TVP23B ENSG00000171928 UTR3 Human protein_coding chr17:18709427 chr17:18709409 . . 0 hm6A_associated_SNPs_18078 0 0 1 1 18709394 18709416 mRNA hsa-miR-153 FAM18B miRanda miRanda
14034 chr17 18709430 18709430 1 + A G rs189595231 18709427 + 18709407 18709447 41 ACGTATGCAAGCAAGTGAAAACAATTAGGGCCAGTGGTATT ACGTATGCAAGCAAGTGAAAACAGTTAGGGCCAGTGGTATT < 41bp 1 0.387677851410657 1 0.0705521106719971 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 TVP23B ENSG00000171928 UTR3 Human protein_coding chr17:18709427 chr17:18709430 . . 0 hm6A_associated_SNPs_18079 0 0 0 3 18709421 18709442 mRNA hsa-miR-193a-3p FAM18B miRanda miRanda
14034 chr17 18709430 18709430 1 + A G rs189595231 18709427 + 18709407 18709447 41 ACGTATGCAAGCAAGTGAAAACAATTAGGGCCAGTGGTATT ACGTATGCAAGCAAGTGAAAACAGTTAGGGCCAGTGGTATT < 41bp 1 0.387677851410657 1 0.0705521106719971 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 TVP23B ENSG00000171928 UTR3 Human protein_coding chr17:18709427 chr17:18709430 . . 0 hm6A_associated_SNPs_18079 0 0 0 3 18709419 18709440 mRNA hsa-miR-328 FAM18B miRanda miRanda
14034 chr17 18709430 18709430 1 + A G rs189595231 18709427 + 18709407 18709447 41 ACGTATGCAAGCAAGTGAAAACAATTAGGGCCAGTGGTATT ACGTATGCAAGCAAGTGAAAACAGTTAGGGCCAGTGGTATT < 41bp 1 0.387677851410657 1 0.0705521106719971 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 TVP23B ENSG00000171928 UTR3 Human protein_coding chr17:18709427 chr17:18709430 . . 0 hm6A_associated_SNPs_18079 0 0 0 3 18709421 18709442 mRNA hsa-miR-193b FAM18B miRanda miRanda
14034 chr17 18834021 18834021 1 + T C rs1801755 18834007 + 18833987 18834027 41 CAGAAACATAGGCTTAGATGACTGAGTTTTCCTTTAGGAAA CAGAAACATAGGCTTAGATGACTGAGTTTTCCTTCAGGAAA < 41bp 1 0.632882301841626 1 0.982865571975708 experiment 0.734235396316749 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 PRPSAP2 ENSG00000141127 UTR3 Human protein_coding chr17:18834007 chr17:18834021 . . 0 hm6A_associated_SNPs_18080 0 0 1 1 18834021 18834042 mRNA hsa-miR-328 PRPSAP2 miRanda miRanda
14034 chr17 18834021 18834021 1 + T C rs1801755 18834028 + 18834008 18834048 41 CTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGA CTGAGTTTTCCTTCAGGAAAACTCCCGAGGGCCAAACTGGA < 41bp 1 0.629506664689719 1 0.972299337387085 experiment 0.740986670620562 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 PRPSAP2 ENSG00000141127 UTR3 Human protein_coding chr17:18834028 chr17:18834021 . . 0 hm6A_associated_SNPs_18081 0 0 1 1 18834021 18834042 mRNA hsa-miR-328 PRPSAP2 miRanda miRanda
14034 chr17 18834031 18834031 1 + C A rs539200746 18834028 + 18834008 18834048 41 CTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGA CTGAGTTTTCCTTTAGGAAAACTACCGAGGGCCAAACTGGA < 41bp 1 0.675147724405959 1 0.971570491790771 experiment 0.649704551188082 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 PRPSAP2 ENSG00000141127 UTR3 Human protein_coding chr17:18834028 chr17:18834031 . . 0 hm6A_associated_SNPs_18082 0 0 1 2 18834024 18834049 mRNA hsa-miR-145 PRPSAP2 miRanda miRanda
14034 chr17 18834031 18834031 1 + C A rs539200746 18834028 + 18834008 18834048 41 CTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGA CTGAGTTTTCCTTTAGGAAAACTACCGAGGGCCAAACTGGA < 41bp 1 0.675147724405959 1 0.971570491790771 experiment 0.649704551188082 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 PRPSAP2 ENSG00000141127 UTR3 Human protein_coding chr17:18834028 chr17:18834031 . . 0 hm6A_associated_SNPs_18082 0 0 1 2 18834021 18834042 mRNA hsa-miR-328 PRPSAP2 miRanda miRanda
14034 chr17 18834031 18834031 1 + C A rs539200746 18834043 + 18834023 18834063 41 GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACT GGAAAACTACCGAGGGCCAAACTGGAAACATAAGAGTGACT < 41bp 1 0.729281768042192 1 0.982979714870453 experiment 0.541436463915616 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 PRPSAP2 ENSG00000141127 UTR3 Human protein_coding chr17:18834043 chr17:18834031 . . 0 hm6A_associated_SNPs_18083 0 0 1 2 18834024 18834049 mRNA hsa-miR-145 PRPSAP2 miRanda miRanda
14034 chr17 18834031 18834031 1 + C A rs539200746 18834043 + 18834023 18834063 41 GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACT GGAAAACTACCGAGGGCCAAACTGGAAACATAAGAGTGACT < 41bp 1 0.729281768042192 1 0.982979714870453 experiment 0.541436463915616 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 PRPSAP2 ENSG00000141127 UTR3 Human protein_coding chr17:18834043 chr17:18834031 . . 0 hm6A_associated_SNPs_18083 0 0 1 2 18834021 18834042 mRNA hsa-miR-328 PRPSAP2 miRanda miRanda
14034 chr17 19239110 19239110 1 + C T rs3803839 19239107 + 19239087 19239127 41 ATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCA ATATTACCTCCCTCTTCCAAACTTCTACTGTCCTCACCTCA < 41bp 1 0.336047085303456 1 0.610721468925476 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000265263 ncRNA_exonic Human antisense chr17:19239107 chr17:19239110 . . 0 hm6A_associated_SNPs_18087 0 0 1 1 19239104 19239127 mRNA hsa-let-7e EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239963 19239986 mRNA hsa-miR-27a EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239980 19240000 mRNA hsa-miR-101 EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239981 19240002 mRNA hsa-miR-139-5p EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239964 19239984 mRNA hsa-miR-212 EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239963 19239986 mRNA hsa-miR-27b EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239965 19239984 mRNA hsa-miR-132 EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239981 19240000 mRNA hsa-miR-144 EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239981 19240003 mRNA hsa-miR-340 EPN2 miRanda miRanda
14034 chr17 19239981 19239981 1 + G A rs181949705 19239978 + 19239958 19239998 41 CTGGTTTTGAACTTGTGTTGACTGTTGATACTTATTTACTG CTGGTTTTGAACTTGTGTTGACTATTGATACTTATTTACTG < 41bp 1 0.524773220783572 1 0.847201645374298 experiment 0.950453558432857 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239978 chr17:19239981 . . 0 hm6A_associated_SNPs_18088 0 0 1 9 19239964 19239986 mRNA hsa-miR-421 EPN2 miRanda miRanda
14034 chr17 19580494 19580494 1 + A G rs7215 19580476 + 19580456 19580496 41 TGGAGCTCCTGACTGCAGGGACTCTGTCCCCACACTCAAAA TGGAGCTCCTGACTGCAGGGACTCTGTCCCCACACTCAGAA < 41bp 1 0.667865618035769 1 0.98175573348999 experiment 0.664268763928461 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 ALDH3A2 ENSG00000072210 UTR3 Human protein_coding chr17:19580476 chr17:19580494 . . 0 hm6A_associated_SNPs_18102 1 0 1 1 19580491 19580511 mRNA hsa-miR-28-5p ALDH3A2 miRanda miRanda
14034 chr17 19580494 19580494 1 + A G rs7215 19580499 + 19580479 19580519 41 CTGTCCCCACACTCAAAAAGACTCAGCTCACTCAATGAGAG CTGTCCCCACACTCAGAAAGACTCAGCTCACTCAATGAGAG < 41bp 1 0.650100814464981 1 0.942737698554993 experiment 0.699798371070039 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 ALDH3A2 ENSG00000072210 UTR3 Human protein_coding chr17:19580499 chr17:19580494 . . 0 hm6A_associated_SNPs_18103 1 0 1 1 19580491 19580511 mRNA hsa-miR-28-5p ALDH3A2 miRanda miRanda
14034 chr17 20217601 20217601 1 + G C rs569199995 20217594 + 20217574 20217614 41 AGCTGGACTGTAAATTGGGGACTCTTTGATCTCTTGTGGGA AGCTGGACTGTAAATTGGGGACTCTTTCATCTCTTGTGGGA < 41bp 1 0.699685484081365 1 0.99293851852417 experiment 0.600629031837271 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 28 SPECC1 ENSG00000263494 ncRNA_intronic Human lincRNA chr17:20217594 chr17:20217601 . . 0 hm6A_associated_SNPs_18110 0 0 1 1 20217596 20217618 mRNA hsa-miR-324-5p CYTSB miRanda miRanda
14034 chr17 25640143 25640143 1 + T A rs561837141 25640130 + 25640110 25640150 41 GTTTTGTTGGAGAGTGTCAGACTGATCTGGAAGTGAAACAC GTTTTGTTGGAGAGTGTCAGACTGATCTGGAAGAGAAACAC < 41bp 1 0.238354926186023 1 0.696319758892059 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640130 chr17:25640143 . . 0 hm6A_associated_SNPs_18131 0 0 1 1 25640143 25640165 mRNA hsa-miR-486-5p WSB1 miRanda miRanda
14034 chr17 25640143 25640143 1 + T A rs561837141 25640147 + 25640127 25640167 41 CAGACTGATCTGGAAGTGAAACACAGTTTATGTACAGGGAA CAGACTGATCTGGAAGAGAAACACAGTTTATGTACAGGGAA < 41bp 1 0.205916882006631 1 0.538493156433105 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640147 chr17:25640143 . . 0 hm6A_associated_SNPs_18132 0 0 1 1 25640143 25640165 mRNA hsa-miR-486-5p WSB1 miRanda miRanda
14034 chr17 25640302 25640302 1 + C A rs372481485 25640309 + 25640289 25640329 41 TTTTTTTACTCCCCCTCTAAACACTGCTGCTGCCTTAATTT TTTTTTTACTCCCACTCTAAACACTGCTGCTGCCTTAATTT < 41bp 1 0.243522873456691 1 0.0974093079566956 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640309 chr17:25640302 . . 0 hm6A_associated_SNPs_18135 0 0 1 5 25640299 25640320 mRNA hsa-miR-15a WSB1 miRanda miRanda
14034 chr17 25640302 25640302 1 + C A rs372481485 25640309 + 25640289 25640329 41 TTTTTTTACTCCCCCTCTAAACACTGCTGCTGCCTTAATTT TTTTTTTACTCCCACTCTAAACACTGCTGCTGCCTTAATTT < 41bp 1 0.243522873456691 1 0.0974093079566956 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640309 chr17:25640302 . . 0 hm6A_associated_SNPs_18135 0 0 1 5 25640300 25640320 mRNA hsa-miR-16 WSB1 miRanda miRanda
14034 chr17 25640302 25640302 1 + C A rs372481485 25640309 + 25640289 25640329 41 TTTTTTTACTCCCCCTCTAAACACTGCTGCTGCCTTAATTT TTTTTTTACTCCCACTCTAAACACTGCTGCTGCCTTAATTT < 41bp 1 0.243522873456691 1 0.0974093079566956 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640309 chr17:25640302 . . 0 hm6A_associated_SNPs_18135 0 0 1 5 25640299 25640320 mRNA hsa-miR-15b WSB1 miRanda miRanda
14034 chr17 25640302 25640302 1 + C A rs372481485 25640309 + 25640289 25640329 41 TTTTTTTACTCCCCCTCTAAACACTGCTGCTGCCTTAATTT TTTTTTTACTCCCACTCTAAACACTGCTGCTGCCTTAATTT < 41bp 1 0.243522873456691 1 0.0974093079566956 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640309 chr17:25640302 . . 0 hm6A_associated_SNPs_18135 0 0 1 5 25640300 25640320 mRNA hsa-miR-195 WSB1 miRanda miRanda
14034 chr17 25640302 25640302 1 + C A rs372481485 25640309 + 25640289 25640329 41 TTTTTTTACTCCCCCTCTAAACACTGCTGCTGCCTTAATTT TTTTTTTACTCCCACTCTAAACACTGCTGCTGCCTTAATTT < 41bp 1 0.243522873456691 1 0.0974093079566956 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640309 chr17:25640302 . . 0 hm6A_associated_SNPs_18135 0 0 1 5 25640300 25640320 mRNA hsa-miR-497 WSB1 miRanda miRanda
14034 chr17 25640441 25640441 1 + C A rs190061572 25640440 + 25640420 25640460 41 TATTTTGTTTATACTAAGGGACAATTATTTTAAGACCATGG TATTTTGTTTATACTAAGGGAAAATTATTTTAAGACCATGG Direct Loss 1 0.572891115672022 1 0.712590336799622 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 22 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640440 chr17:25640441 . . 0 hm6A_associated_SNPs_18136 0 0 1 3 25640420 25640441 mRNA hsa-miR-204 WSB1 miRanda miRanda
14034 chr17 25640441 25640441 1 + C A rs190061572 25640440 + 25640420 25640460 41 TATTTTGTTTATACTAAGGGACAATTATTTTAAGACCATGG TATTTTGTTTATACTAAGGGAAAATTATTTTAAGACCATGG Direct Loss 1 0.572891115672022 1 0.712590336799622 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 22 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640440 chr17:25640441 . . 0 hm6A_associated_SNPs_18136 0 0 1 3 25640420 25640441 mRNA hsa-miR-211 WSB1 miRanda miRanda
14034 chr17 25640441 25640441 1 + C A rs190061572 25640440 + 25640420 25640460 41 TATTTTGTTTATACTAAGGGACAATTATTTTAAGACCATGG TATTTTGTTTATACTAAGGGAAAATTATTTTAAGACCATGG Direct Loss 1 0.572891115672022 1 0.712590336799622 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 22 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640440 chr17:25640441 . . 0 hm6A_associated_SNPs_18136 0 0 1 3 25640426 25640446 mRNA hsa-miR-219-5p WSB1 miRanda miRanda
14034 chr17 25640443 25640443 1 + A T rs138745604 25640440 + 25640420 25640460 41 TATTTTGTTTATACTAAGGGACAATTATTTTAAGACCATGG TATTTTGTTTATACTAAGGGACATTTATTTTAAGACCATGG < 41bp 1 0.553222164751445 1 0.868977189064026 experiment 0.89355567049711 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25640440 chr17:25640443 . . 0 hm6A_associated_SNPs_18137 0 0 1 1 25640426 25640446 mRNA hsa-miR-219-5p WSB1 miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519201 26519223 mRNA hsa-miR-15a NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519201 26519223 mRNA hsa-miR-16 NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519200 26519222 mRNA hsa-miR-103 NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519200 26519222 mRNA hsa-miR-107 NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519201 26519223 mRNA hsa-miR-15b NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519203 26519223 mRNA hsa-miR-195 NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519187 26519211 mRNA hsa-miR-296-3p NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519181 26519205 mRNA hsa-miR-383 NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519201 26519223 mRNA hsa-miR-424 NLK miRanda miRanda
14034 chr17 26519204 26519204 1 + C T rs3182380 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATTA < 41bp 1 0.38753207370469 1 0.000697672367095947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 40 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519204 synonymous SNV . 0 hm6A_associated_SNPs_18138 0 0 1 10 26519203 26519223 mRNA hsa-miR-497 NLK miRanda miRanda
14034 chr17 26654170 26654170 1 + T G rs183657898 26654184 + 26654164 26654204 41 TTTTTTTTGTGTGTGTGGAGACAGGGTTTTGCCATGTTGCC TTTTTTGTGTGTGTGTGGAGACAGGGTTTTGCCATGTTGCC < 41bp 1 0.443316215480109 1 0.00840866565704346 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 TMEM97 ENSG00000109084 UTR3 Human protein_coding chr17:26654184 chr17:26654170 . . 0 hm6A_associated_SNPs_18139 0 0 1 2 26654169 26654191 mRNA hsa-miR-10b TMEM97 miRanda miRanda
14034 chr17 26654170 26654170 1 + T G rs183657898 26654184 + 26654164 26654204 41 TTTTTTTTGTGTGTGTGGAGACAGGGTTTTGCCATGTTGCC TTTTTTGTGTGTGTGTGGAGACAGGGTTTTGCCATGTTGCC < 41bp 1 0.443316215480109 1 0.00840866565704346 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 TMEM97 ENSG00000109084 UTR3 Human protein_coding chr17:26654184 chr17:26654170 . . 0 hm6A_associated_SNPs_18139 0 0 1 2 26654169 26654190 mRNA hsa-miR-339-5p TMEM97 miRanda miRanda
14034 chr17 26654967 26654967 1 + T G rs184912091 26654959 + 26654939 26654979 41 AGTATGCTCCCTAGTGGATAACTTAATCTTTTAATACAGTT AGTATGCTCCCTAGTGGATAACTTAATCGTTTAATACAGTT < 41bp 1 0.239009654335391 1 0.0152687728404999 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TMEM97 ENSG00000109084 UTR3 Human protein_coding chr17:26654959 chr17:26654967 . . 0 hm6A_associated_SNPs_18142 0 0 1 1 26654960 26654982 mRNA hsa-miR-1 TMEM97 miRanda miRanda
14034 chr17 26655708 26655708 1 - T C rs11871371 26655700 - 26655680 26655720 41 AGAACAAAATGAATTTATTGACCAATTTATTTTTCAGAAAT AGAACAAAATGAGTTTATTGACCAATTTATTTTTCAGAAAT < 41bp 1 0.734030977467129 1 0.00584280490875244 experiment 0.531938045065742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 IFT20 ENSG00000109083 CDS Human protein_coding chr17:26655700 chr17:26655708 synonymous SNV . 0 hm6A_associated_SNPs_18143 0 0 1 4 26655704 26655725 mRNA hsa-miR-181b IFT20 miRanda miRanda
14034 chr17 26655708 26655708 1 - T C rs11871371 26655700 - 26655680 26655720 41 AGAACAAAATGAATTTATTGACCAATTTATTTTTCAGAAAT AGAACAAAATGAGTTTATTGACCAATTTATTTTTCAGAAAT < 41bp 1 0.734030977467129 1 0.00584280490875244 experiment 0.531938045065742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 IFT20 ENSG00000109083 CDS Human protein_coding chr17:26655700 chr17:26655708 synonymous SNV . 0 hm6A_associated_SNPs_18143 0 0 1 4 26655695 26655716 mRNA hsa-miR-133a IFT20 miRanda miRanda
14034 chr17 26655708 26655708 1 - T C rs11871371 26655700 - 26655680 26655720 41 AGAACAAAATGAATTTATTGACCAATTTATTTTTCAGAAAT AGAACAAAATGAGTTTATTGACCAATTTATTTTTCAGAAAT < 41bp 1 0.734030977467129 1 0.00584280490875244 experiment 0.531938045065742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 IFT20 ENSG00000109083 CDS Human protein_coding chr17:26655700 chr17:26655708 synonymous SNV . 0 hm6A_associated_SNPs_18143 0 0 1 4 26655695 26655716 mRNA hsa-miR-133b IFT20 miRanda miRanda
14034 chr17 26655708 26655708 1 - T C rs11871371 26655700 - 26655680 26655720 41 AGAACAAAATGAATTTATTGACCAATTTATTTTTCAGAAAT AGAACAAAATGAGTTTATTGACCAATTTATTTTTCAGAAAT < 41bp 1 0.734030977467129 1 0.00584280490875244 experiment 0.531938045065742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 IFT20 ENSG00000109083 CDS Human protein_coding chr17:26655700 chr17:26655708 synonymous SNV . 0 hm6A_associated_SNPs_18143 0 0 1 4 26655704 26655725 mRNA hsa-miR-181d IFT20 miRanda miRanda
14034 chr17 26673182 26673182 1 + A C rs3093703 26673167 + 26673147 26673187 41 AGACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGA AGACACAAGGACCTGAAGTGACATGACGGCGGGACCGGGGA < 41bp 1 0.706236893680256 1 0.378792494535446 experiment 0.587526212639487 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673167 chr17:26673182 . . 0 hm6A_associated_SNPs_18149 0 0 1 3 26673175 26673195 mRNA hsa-miR-23a TNFAIP1 miRanda miRanda
14034 chr17 26673182 26673182 1 + A C rs3093703 26673167 + 26673147 26673187 41 AGACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGA AGACACAAGGACCTGAAGTGACATGACGGCGGGACCGGGGA < 41bp 1 0.706236893680256 1 0.378792494535446 experiment 0.587526212639487 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673167 chr17:26673182 . . 0 hm6A_associated_SNPs_18149 0 0 1 3 26673179 26673198 mRNA hsa-miR-224 TNFAIP1 miRanda miRanda
14034 chr17 26673182 26673182 1 + A C rs3093703 26673167 + 26673147 26673187 41 AGACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGA AGACACAAGGACCTGAAGTGACATGACGGCGGGACCGGGGA < 41bp 1 0.706236893680256 1 0.378792494535446 experiment 0.587526212639487 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673167 chr17:26673182 . . 0 hm6A_associated_SNPs_18149 0 0 1 3 26673175 26673195 mRNA hsa-miR-23b TNFAIP1 miRanda miRanda
14034 chr17 26673182 26673182 1 + A C rs3093703 26673194 + 26673174 26673214 41 GGCGGGACAGGGGAAATGTGACTTTCTAATTAGGCATTTTA GGCGGGACCGGGGAAATGTGACTTTCTAATTAGGCATTTTA < 41bp 1 0.491832800631062 1 0.302461177110672 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673194 chr17:26673182 . . 0 hm6A_associated_SNPs_18150 0 0 1 3 26673175 26673195 mRNA hsa-miR-23a TNFAIP1 miRanda miRanda
14034 chr17 26673182 26673182 1 + A C rs3093703 26673194 + 26673174 26673214 41 GGCGGGACAGGGGAAATGTGACTTTCTAATTAGGCATTTTA GGCGGGACCGGGGAAATGTGACTTTCTAATTAGGCATTTTA < 41bp 1 0.491832800631062 1 0.302461177110672 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673194 chr17:26673182 . . 0 hm6A_associated_SNPs_18150 0 0 1 3 26673179 26673198 mRNA hsa-miR-224 TNFAIP1 miRanda miRanda
14034 chr17 26673182 26673182 1 + A C rs3093703 26673194 + 26673174 26673214 41 GGCGGGACAGGGGAAATGTGACTTTCTAATTAGGCATTTTA GGCGGGACCGGGGAAATGTGACTTTCTAATTAGGCATTTTA < 41bp 1 0.491832800631062 1 0.302461177110672 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673194 chr17:26673182 . . 0 hm6A_associated_SNPs_18150 0 0 1 3 26673175 26673195 mRNA hsa-miR-23b TNFAIP1 miRanda miRanda
14034 chr17 26673236 26673236 1 + T C rs141105720 26673252 + 26673232 26673272 41 AATGTATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG AATGCATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG < 41bp 1 0.6186635934549 1 0.355189204216003 experiment 0.762672813090201 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673252 chr17:26673236 . . 0 hm6A_associated_SNPs_18151 0 0 1 4 26673215 26673237 mRNA hsa-miR-181a TNFAIP1 miRanda miRanda
14034 chr17 26673236 26673236 1 + T C rs141105720 26673252 + 26673232 26673272 41 AATGTATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG AATGCATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG < 41bp 1 0.6186635934549 1 0.355189204216003 experiment 0.762672813090201 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673252 chr17:26673236 . . 0 hm6A_associated_SNPs_18151 0 0 1 4 26673215 26673237 mRNA hsa-miR-181b TNFAIP1 miRanda miRanda
14034 chr17 26673236 26673236 1 + T C rs141105720 26673252 + 26673232 26673272 41 AATGTATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG AATGCATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG < 41bp 1 0.6186635934549 1 0.355189204216003 experiment 0.762672813090201 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673252 chr17:26673236 . . 0 hm6A_associated_SNPs_18151 0 0 1 4 26673215 26673237 mRNA hsa-miR-181c TNFAIP1 miRanda miRanda
14034 chr17 26673236 26673236 1 + T C rs141105720 26673252 + 26673232 26673272 41 AATGTATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG AATGCATAAACAGCACTAAGACTCTCAGGTCAGGTACCTTG < 41bp 1 0.6186635934549 1 0.355189204216003 experiment 0.762672813090201 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26673252 chr17:26673236 . . 0 hm6A_associated_SNPs_18151 0 0 1 4 26673215 26673237 mRNA hsa-miR-181d TNFAIP1 miRanda miRanda
14034 chr17 26673804 26673804 1 + T A rs561334970 26673792 + 26673772 26673812 41 AGCAGCCCAGGGGTAAGTAAACAAAGTATGGATGAAGGTCA AGCAGCCCAGGGGTAAGTAAACAAAGTATGGAAGAAGGTCA < 41bp 1 0.451833656732475 1 0.343031406402588 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 33 POLDIP2;TNFAIP1 ENSG00000004142;ENSG00000109079 UTR3 Human other chr17:26673792 chr17:26673804 . . 0 hm6A_associated_SNPs_18156 0 0 1 1 26673789 26673810 mRNA hsa-miR-205 TNFAIP1 miRanda miRanda
14034 chr17 26688663 26688663 1 + G A rs708100 26688660 + 26688640 26688680 41 GAACTTGTCCATATGTACAAACTGATCACCAGCTTTCTCCA GAACTTGTCCATATGTACAAACTAATCACCAGCTTTCTCCA < 41bp 1 0.645613781919862 1 0.875451028347015 experiment 0.708772436160276 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 TMEM199 ENSG00000265618 ncRNA_exonic Human antisense chr17:26688660 chr17:26688663 . . 0 hm6A_associated_SNPs_18157 0 1 1 6 26688645 26688673 mRNA hsa-miR-138 TMEM199 miRanda miRanda
14034 chr17 26688663 26688663 1 + G A rs708100 26688660 + 26688640 26688680 41 GAACTTGTCCATATGTACAAACTGATCACCAGCTTTCTCCA GAACTTGTCCATATGTACAAACTAATCACCAGCTTTCTCCA < 41bp 1 0.645613781919862 1 0.875451028347015 experiment 0.708772436160276 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 TMEM199 ENSG00000265618 ncRNA_exonic Human antisense chr17:26688660 chr17:26688663 . . 0 hm6A_associated_SNPs_18157 0 1 1 6 26688654 26688676 mRNA hsa-miR-320a TMEM199 miRanda miRanda
14034 chr17 26688663 26688663 1 + G A rs708100 26688660 + 26688640 26688680 41 GAACTTGTCCATATGTACAAACTGATCACCAGCTTTCTCCA GAACTTGTCCATATGTACAAACTAATCACCAGCTTTCTCCA < 41bp 1 0.645613781919862 1 0.875451028347015 experiment 0.708772436160276 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 TMEM199 ENSG00000265618 ncRNA_exonic Human antisense chr17:26688660 chr17:26688663 . . 0 hm6A_associated_SNPs_18157 0 1 1 6 26688646 26688669 mRNA hsa-miR-542-3p TMEM199 miRanda miRanda
14034 chr17 26688663 26688663 1 + G A rs708100 26688660 + 26688640 26688680 41 GAACTTGTCCATATGTACAAACTGATCACCAGCTTTCTCCA GAACTTGTCCATATGTACAAACTAATCACCAGCTTTCTCCA < 41bp 1 0.645613781919862 1 0.875451028347015 experiment 0.708772436160276 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 TMEM199 ENSG00000265618 ncRNA_exonic Human antisense chr17:26688660 chr17:26688663 . . 0 hm6A_associated_SNPs_18157 0 1 1 6 26688654 26688676 mRNA hsa-miR-320b TMEM199 miRanda miRanda
14034 chr17 26688663 26688663 1 + G A rs708100 26688660 + 26688640 26688680 41 GAACTTGTCCATATGTACAAACTGATCACCAGCTTTCTCCA GAACTTGTCCATATGTACAAACTAATCACCAGCTTTCTCCA < 41bp 1 0.645613781919862 1 0.875451028347015 experiment 0.708772436160276 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 TMEM199 ENSG00000265618 ncRNA_exonic Human antisense chr17:26688660 chr17:26688663 . . 0 hm6A_associated_SNPs_18157 0 1 1 6 26688656 26688676 mRNA hsa-miR-320c TMEM199 miRanda miRanda
14034 chr17 26688663 26688663 1 + G A rs708100 26688660 + 26688640 26688680 41 GAACTTGTCCATATGTACAAACTGATCACCAGCTTTCTCCA GAACTTGTCCATATGTACAAACTAATCACCAGCTTTCTCCA < 41bp 1 0.645613781919862 1 0.875451028347015 experiment 0.708772436160276 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 TMEM199 ENSG00000265618 ncRNA_exonic Human antisense chr17:26688660 chr17:26688663 . . 0 hm6A_associated_SNPs_18157 0 1 1 6 26688657 26688676 mRNA hsa-miR-320d TMEM199 miRanda miRanda
14034 chr17 27384007 27384007 1 + A C rs8081500 27384025 + 27384005 27384045 41 AAAAAAACAAAACAAAAAAAACCTCTTTGCTGGTATATTTG AACAAAACAAAACAAAAAAAACCTCTTTGCTGGTATATTTG < 41bp 1 0.0673833355550111 1 0.0063321590423584 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 3 PIPOX ENSG00000179761 UTR3 Human protein_coding chr17:27384025 chr17:27384007 . . 0 hm6A_associated_SNPs_18173 0 0 0 1 27384003 27384023 mRNA hsa-miR-129-5p PIPOX miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941493 + 27941473 27941513 41 CCACTTGCCCCCACACGGAGACTGACTCTAAAACCCTTCAT CCACTTGCCCCCACACGGAGACTGACTCTAAAACCCTTTAT < 41bp 1 0.786052246464359 1 0.831995844841003 experiment 0.427895507071283 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 39 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941493 chr17:27941511 . . 0 hm6A_associated_SNPs_18179 0 0 1 3 27941503 27941525 mRNA hsa-miR-29a ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941493 + 27941473 27941513 41 CCACTTGCCCCCACACGGAGACTGACTCTAAAACCCTTCAT CCACTTGCCCCCACACGGAGACTGACTCTAAAACCCTTTAT < 41bp 1 0.786052246464359 1 0.831995844841003 experiment 0.427895507071283 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 39 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941493 chr17:27941511 . . 0 hm6A_associated_SNPs_18179 0 0 1 3 27941503 27941525 mRNA hsa-miR-29b ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941493 + 27941473 27941513 41 CCACTTGCCCCCACACGGAGACTGACTCTAAAACCCTTCAT CCACTTGCCCCCACACGGAGACTGACTCTAAAACCCTTTAT < 41bp 1 0.786052246464359 1 0.831995844841003 experiment 0.427895507071283 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 39 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941493 chr17:27941511 . . 0 hm6A_associated_SNPs_18179 0 0 1 3 27941503 27941525 mRNA hsa-miR-29c ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941497 + 27941477 27941517 41 TTGCCCCCACACGGAGACTGACTCTAAAACCCTTCATCCAA TTGCCCCCACACGGAGACTGACTCTAAAACCCTTTATCCAA < 41bp 1 0.748919430233623 1 0.751285552978516 experiment 0.502161139532755 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941497 chr17:27941511 . . 0 hm6A_associated_SNPs_18180 0 0 1 3 27941503 27941525 mRNA hsa-miR-29a ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941497 + 27941477 27941517 41 TTGCCCCCACACGGAGACTGACTCTAAAACCCTTCATCCAA TTGCCCCCACACGGAGACTGACTCTAAAACCCTTTATCCAA < 41bp 1 0.748919430233623 1 0.751285552978516 experiment 0.502161139532755 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941497 chr17:27941511 . . 0 hm6A_associated_SNPs_18180 0 0 1 3 27941503 27941525 mRNA hsa-miR-29b ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941497 + 27941477 27941517 41 TTGCCCCCACACGGAGACTGACTCTAAAACCCTTCATCCAA TTGCCCCCACACGGAGACTGACTCTAAAACCCTTTATCCAA < 41bp 1 0.748919430233623 1 0.751285552978516 experiment 0.502161139532755 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941497 chr17:27941511 . . 0 hm6A_associated_SNPs_18180 0 0 1 3 27941503 27941525 mRNA hsa-miR-29c ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941505 + 27941485 27941525 41 ACACGGAGACTGACTCTAAAACCCTTCATCCAATGGTGCTA ACACGGAGACTGACTCTAAAACCCTTTATCCAATGGTGCTA < 41bp 1 0.335151875675622 1 0.37115490436554 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941505 chr17:27941511 . . 0 hm6A_associated_SNPs_18181 0 0 1 3 27941503 27941525 mRNA hsa-miR-29a ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941505 + 27941485 27941525 41 ACACGGAGACTGACTCTAAAACCCTTCATCCAATGGTGCTA ACACGGAGACTGACTCTAAAACCCTTTATCCAATGGTGCTA < 41bp 1 0.335151875675622 1 0.37115490436554 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941505 chr17:27941511 . . 0 hm6A_associated_SNPs_18181 0 0 1 3 27941503 27941525 mRNA hsa-miR-29b ANKRD13B miRanda miRanda
14034 chr17 27941511 27941511 1 + C T rs79996304 27941505 + 27941485 27941525 41 ACACGGAGACTGACTCTAAAACCCTTCATCCAATGGTGCTA ACACGGAGACTGACTCTAAAACCCTTTATCCAATGGTGCTA < 41bp 1 0.335151875675622 1 0.37115490436554 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 ANKRD13B ENSG00000264031 ncRNA_intronic Human antisense chr17:27941505 chr17:27941511 . . 0 hm6A_associated_SNPs_18181 0 0 1 3 27941503 27941525 mRNA hsa-miR-29c ANKRD13B miRanda miRanda
14034 chr17 28792444 28792444 1 + C A rs116917123 28792435 + 28792415 28792455 41 TGTTCCAAGGCTAGATCGGAACTGGTAGACTACGCTGTAAG TGTTCCAAGGCTAGATCGGAACTGGTAGAATACGCTGTAAG < 41bp 1 0.629312684400739 1 0.0800493359565735 experiment 0.741374631198521 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 30 CPD ENSG00000108582 UTR3 Human protein_coding chr17:28792435 chr17:28792444 . . 0 hm6A_associated_SNPs_18187 0 0 1 1 28792428 28792451 mRNA hsa-miR-196b CPD miRanda miRanda
14034 chr17 28794020 28794020 1 + A G rs9406 28794000 + 28793980 28794020 41 ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTA ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTG < 41bp 1 0.226076913590069 1 0.56866866350174 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 41 CPD ENSG00000108582 UTR3 Human protein_coding chr17:28794000 chr17:28794020 . . 0 hm6A_associated_SNPs_18188 0 0 1 4 28794019 28794041 mRNA hsa-miR-181a CPD miRanda miRanda
14034 chr17 28794020 28794020 1 + A G rs9406 28794000 + 28793980 28794020 41 ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTA ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTG < 41bp 1 0.226076913590069 1 0.56866866350174 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 41 CPD ENSG00000108582 UTR3 Human protein_coding chr17:28794000 chr17:28794020 . . 0 hm6A_associated_SNPs_18188 0 0 1 4 28794019 28794041 mRNA hsa-miR-181b CPD miRanda miRanda
14034 chr17 28794020 28794020 1 + A G rs9406 28794000 + 28793980 28794020 41 ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTA ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTG < 41bp 1 0.226076913590069 1 0.56866866350174 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 41 CPD ENSG00000108582 UTR3 Human protein_coding chr17:28794000 chr17:28794020 . . 0 hm6A_associated_SNPs_18188 0 0 1 4 28794019 28794041 mRNA hsa-miR-181c CPD miRanda miRanda
14034 chr17 28794020 28794020 1 + A G rs9406 28794000 + 28793980 28794020 41 ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTA ATAATGCATTTAGCTGGAAAACAAGACTTTCCCAGCTTGTG < 41bp 1 0.226076913590069 1 0.56866866350174 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 41 CPD ENSG00000108582 UTR3 Human protein_coding chr17:28794000 chr17:28794020 . . 0 hm6A_associated_SNPs_18188 0 0 1 4 28794019 28794041 mRNA hsa-miR-181d CPD miRanda miRanda
14034 chr17 28794743 28794743 1 + G A rs572826048 28794736 + 28794716 28794756 41 AGCTTATTGTGTTTGAGCTAACACCAGGTTACTCAGTAACC AGCTTATTGTGTTTGAGCTAACACCAGATTACTCAGTAACC < 41bp 1 0.267544753816529 1 0.00284916162490845 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 CPD ENSG00000108582 UTR3 Human protein_coding chr17:28794736 chr17:28794743 . . 0 hm6A_associated_SNPs_18189 0 0 1 1 28794723 28794746 mRNA hsa-miR-490-3p CPD miRanda miRanda
14034 chr17 30697334 30697334 1 + C T rs114800228 30697315 + 30697295 30697335 41 TGACCCACCAAGGTCATGTGACTTTTCTGTACTGTTAAACT TGACCCACCAAGGTCATGTGACTTTTCTGTACTGTTAAATT < 41bp 1 0.438168048559367 1 0.504201769828796 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 ZNF207 ENSG00000010244 UTR3 Human protein_coding chr17:30697315 chr17:30697334 . . 0 hm6A_associated_SNPs_18221 0 0 1 2 30697332 30697356 mRNA hsa-miR-136 ZNF207 miRanda miRanda
14034 chr17 30697334 30697334 1 + C T rs114800228 30697315 + 30697295 30697335 41 TGACCCACCAAGGTCATGTGACTTTTCTGTACTGTTAAACT TGACCCACCAAGGTCATGTGACTTTTCTGTACTGTTAAATT < 41bp 1 0.438168048559367 1 0.504201769828796 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 ZNF207 ENSG00000010244 UTR3 Human protein_coding chr17:30697315 chr17:30697334 . . 0 hm6A_associated_SNPs_18221 0 0 1 2 30697333 30697352 mRNA hsa-miR-590-3p ZNF207 miRanda miRanda
14034 chr17 33289937 33289937 1 + A T rs8249 33289950 + 33289930 33289970 41 TGCCAACATTTCCACGACAGACTTAACTGTATAATTTCGTT TGCCAACTTTTCCACGACAGACTTAACTGTATAATTTCGTT < 41bp 1 0.667969740737104 1 0.98897522687912 experiment 0.664060518525791 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 8 ZNF830 ENSG00000198783 UTR3 Human protein_coding chr17:33289950 chr17:33289937 . . 0 hm6A_associated_SNPs_18227 0 0 1 1 33289934 33289954 mRNA hsa-miR-382 ZNF830 miRanda miRanda
14034 chr17 34051052 34051052 1 + C T rs141919698 34051072 + 34051052 34051092 41 CATTTCAAAAGCAGAAAAAGACAACAAATATTAAAGCAAGG TATTTCAAAAGCAGAAAAAGACAACAAATATTAAAGCAAGG < 41bp 1 0.594832023044722 1 0.442255288362503 experiment 0.810335953910555 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 1 AP2B1 ENSG00000006125 UTR3 Human protein_coding chr17:34051072 chr17:34051052 . . 0 hm6A_associated_SNPs_18232 0 0 1 2 34051038 34051059 mRNA hsa-miR-203 AP2B1 miRanda miRanda
14034 chr17 34051052 34051052 1 + C T rs141919698 34051072 + 34051052 34051092 41 CATTTCAAAAGCAGAAAAAGACAACAAATATTAAAGCAAGG TATTTCAAAAGCAGAAAAAGACAACAAATATTAAAGCAAGG < 41bp 1 0.594832023044722 1 0.442255288362503 experiment 0.810335953910555 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 1 AP2B1 ENSG00000006125 UTR3 Human protein_coding chr17:34051072 chr17:34051052 . . 0 hm6A_associated_SNPs_18232 0 0 1 2 34051047 34051068 mRNA hsa-miR-544 AP2B1 miRanda miRanda
14034 chr17 34895027 34895027 1 + G A rs76203149 34895011 + 34894991 34895031 41 AAAGAAACTTTATAGTTGTGACATTGAAAGACTGTTGGGGT AAAGAAACTTTATAGTTGTGACATTGAAAGACTGTTAGGGT < 41bp 1 0.337580586794874 1 0.0184139013290405 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 PIGW ENSG00000184886 UTR3 Human other chr17:34895011 chr17:34895027 . . 0 hm6A_associated_SNPs_18247 0 0 1 2 34895004 34895027 mRNA hsa-miR-212 PIGW miRanda miRanda
14034 chr17 34895027 34895027 1 + G A rs76203149 34895011 + 34894991 34895031 41 AAAGAAACTTTATAGTTGTGACATTGAAAGACTGTTGGGGT AAAGAAACTTTATAGTTGTGACATTGAAAGACTGTTAGGGT < 41bp 1 0.337580586794874 1 0.0184139013290405 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 PIGW ENSG00000184886 UTR3 Human other chr17:34895011 chr17:34895027 . . 0 hm6A_associated_SNPs_18247 0 0 1 2 34895003 34895027 mRNA hsa-miR-132 PIGW miRanda miRanda
14034 chr17 34946164 34946164 1 + G A rs187960396 34946157 + 34946137 34946177 41 TATAATTCTGTACAGAAATGACAATGAGCTGAATATATGGT TATAATTCTGTACAGAAATGACAATGAACTGAATATATGGT < 41bp 1 0.791155611452825 1 0.809928894042969 experiment 0.41768877709435 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 GGNBP2 ENSG00000005955 UTR3 Human other chr17:34946157 chr17:34946164 . . 0 hm6A_associated_SNPs_18248 0 0 1 2 34946146 34946167 mRNA hsa-miR-21 GGNBP2 miRanda miRanda
14034 chr17 34946164 34946164 1 + G A rs187960396 34946157 + 34946137 34946177 41 TATAATTCTGTACAGAAATGACAATGAGCTGAATATATGGT TATAATTCTGTACAGAAATGACAATGAACTGAATATATGGT < 41bp 1 0.791155611452825 1 0.809928894042969 experiment 0.41768877709435 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 GGNBP2 ENSG00000005955 UTR3 Human other chr17:34946157 chr17:34946164 . . 0 hm6A_associated_SNPs_18248 0 0 1 2 34946144 34946167 mRNA hsa-miR-590-5p GGNBP2 miRanda miRanda
14034 chr17 35873500 35873500 1 + G A rs187429750 35873508 + 35873488 35873528 41 TATTATTTAGCTGTTAAGTAACTATAATGAAATCTGCTGCA TATTATTTAGCTATTAAGTAACTATAATGAAATCTGCTGCA < 41bp 1 0.469990353966278 1 0.022443950176239 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 DUSP14 ENSG00000161326 UTR3 Human other chr17:35873508 chr17:35873500 . . 0 hm6A_associated_SNPs_18254 0 0 1 1 35873484 35873505 mRNA hsa-miR-194 DUSP14 miRanda miRanda
14034 chr17 36920434 36920434 1 + G A rs192259852 36920420 + 36920400 36920440 41 CTGAAGGCCCGAATGGACTAACCCTGTTCCCAGAGCCCACT CTGAAGGCCCGAATGGACTAACCCTGTTCCCAGAACCCACT < 41bp 1 0.438670255232698 1 0.544837534427643 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 35 PSMB3 ENSG00000108294 UTR3 Human other chr17:36920420 chr17:36920434 . . 0 hm6A_associated_SNPs_18268 0 0 1 3 36920431 36920452 mRNA hsa-miR-186 PSMB3 miRanda miRanda
14034 chr17 36920434 36920434 1 + G A rs192259852 36920420 + 36920400 36920440 41 CTGAAGGCCCGAATGGACTAACCCTGTTCCCAGAGCCCACT CTGAAGGCCCGAATGGACTAACCCTGTTCCCAGAACCCACT < 41bp 1 0.438670255232698 1 0.544837534427643 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 35 PSMB3 ENSG00000108294 UTR3 Human other chr17:36920420 chr17:36920434 . . 0 hm6A_associated_SNPs_18268 0 0 1 3 36920421 36920435 mRNA hsa-miR-330-5p PSMB3 miRanda miRanda
14034 chr17 36920434 36920434 1 + G A rs192259852 36920420 + 36920400 36920440 41 CTGAAGGCCCGAATGGACTAACCCTGTTCCCAGAGCCCACT CTGAAGGCCCGAATGGACTAACCCTGTTCCCAGAACCCACT < 41bp 1 0.438670255232698 1 0.544837534427643 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 35 PSMB3 ENSG00000108294 UTR3 Human other chr17:36920420 chr17:36920434 . . 0 hm6A_associated_SNPs_18268 0 0 1 3 36920421 36920435 mRNA hsa-miR-326 PSMB3 miRanda miRanda
14034 chr17 37077790 37077790 1 + C T rs185815654 37077798 + 37077778 37077818 41 TGAAATTTGCCTCTGTCCAAACATTTCATCCGTGTGTATGT TGAAATTTGCCTTTGTCCAAACATTTCATCCGTGTGTATGT < 41bp 1 0.485857403257023 1 0.121083229780197 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 13 LASP1 ENSG00000265784 ncRNA_exonic Human antisense chr17:37077798 chr17:37077790 . . 0 hm6A_associated_SNPs_18277 0 0 1 1 37077786 37077806 mRNA hsa-miR-203 LASP1 miRanda miRanda
14034 chr17 38286368 38286368 1 + T G rs529141821 38286366 + 38286346 38286386 41 ACCTGGGCCTCCGCTCTTTAACTATATAAACATTTATCTGT ACCTGGGCCTCCGCTCTTTAACGATATAAACATTTATCTGT Direct Loss 1 0.447917075235318 1 0.0282637774944305 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 MSL1 ENSG00000188895 UTR3 Human protein_coding chr17:38286366 chr17:38286368 . . 0 hm6A_associated_SNPs_18301 0 0 1 2 38286353 38286374 mRNA hsa-miR-340 MSL1 miRanda miRanda
14034 chr17 38286368 38286368 1 + T G rs529141821 38286366 + 38286346 38286386 41 ACCTGGGCCTCCGCTCTTTAACTATATAAACATTTATCTGT ACCTGGGCCTCCGCTCTTTAACGATATAAACATTTATCTGT Direct Loss 1 0.447917075235318 1 0.0282637774944305 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 MSL1 ENSG00000188895 UTR3 Human protein_coding chr17:38286366 chr17:38286368 . . 0 hm6A_associated_SNPs_18301 0 0 1 2 38286357 38286380 mRNA hsa-miR-590-3p MSL1 miRanda miRanda
14034 chr17 38286368 38286368 1 + T G rs529141821 38286375 + 38286355 38286395 41 TCCGCTCTTTAACTATATAAACATTTATCTGTATATCTATG TCCGCTCTTTAACGATATAAACATTTATCTGTATATCTATG < 41bp 1 0.632265412475181 1 0.0596401691436768 experiment 0.735469175049639 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 14 MSL1 ENSG00000188895 UTR3 Human protein_coding chr17:38286375 chr17:38286368 . . 0 hm6A_associated_SNPs_18302 0 0 1 2 38286353 38286374 mRNA hsa-miR-340 MSL1 miRanda miRanda
14034 chr17 38286368 38286368 1 + T G rs529141821 38286375 + 38286355 38286395 41 TCCGCTCTTTAACTATATAAACATTTATCTGTATATCTATG TCCGCTCTTTAACGATATAAACATTTATCTGTATATCTATG < 41bp 1 0.632265412475181 1 0.0596401691436768 experiment 0.735469175049639 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 14 MSL1 ENSG00000188895 UTR3 Human protein_coding chr17:38286375 chr17:38286368 . . 0 hm6A_associated_SNPs_18302 0 0 1 2 38286357 38286380 mRNA hsa-miR-590-3p MSL1 miRanda miRanda
14034 chr17 38326864 38326864 1 + C T rs1107651 38326852 + 38326832 38326872 41 GGCTCTAGAGAGAGGGAGAAACAAGTGGACCTCGTCCCATC GGCTCTAGAGAGAGGGAGAAACAAGTGGACCTTGTCCCATC < 41bp 1 0.592726385135153 1 0.610677063465118 experiment 0.814547229729693 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 CASC3 ENSG00000108349 UTR3 Human protein_coding chr17:38326852 chr17:38326864 . . 0 hm6A_associated_SNPs_18305 0 0 1 1 38326853 38326877 mRNA hsa-miR-203 CASC3 miRanda miRanda
14034 chr17 39847294 39847294 1 + C A rs3209306 39847282 + 39847262 39847302 41 TCTTGAAGTCCCTCATTTAAACAGAGGTCAAGCAATAGGCG TCTTGAAGTCCCTCATTTAAACAGAGGTCAAGAAATAGGCG < 41bp 1 0.488148367558961 1 0.0437751114368439 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847282 chr17:39847294 . . 0 hm6A_associated_SNPs_18326 0 0 1 1 39847277 39847299 mRNA hsa-miR-137 EIF1 miRanda miRanda
14034 chr17 39847355 39847355 1 + C T rs535038124 39847375 + 39847355 39847395 41 CCAGAGCCCTAAGATTACAAACAACTATGGCCGGAACCTCC TCAGAGCCCTAAGATTACAAACAACTATGGCCGGAACCTCC < 41bp 1 0.399063365188147 1 0.230816602706909 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847375 chr17:39847355 . . 0 hm6A_associated_SNPs_18327 0 0 1 2 39847340 39847361 mRNA hsa-miR-330-5p EIF1 miRanda miRanda
14034 chr17 39847355 39847355 1 + C T rs535038124 39847375 + 39847355 39847395 41 CCAGAGCCCTAAGATTACAAACAACTATGGCCGGAACCTCC TCAGAGCCCTAAGATTACAAACAACTATGGCCGGAACCTCC < 41bp 1 0.399063365188147 1 0.230816602706909 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847375 chr17:39847355 . . 0 hm6A_associated_SNPs_18327 0 0 1 2 39847342 39847361 mRNA hsa-miR-326 EIF1 miRanda miRanda
14034 chr17 39847625 39847625 1 + G A rs548518093 39847605 + 39847585 39847625 41 ACCGCTAGCGAGGTGATAGGACATCTGGCTTGCCACAAAGG ACCGCTAGCGAGGTGATAGGACATCTGGCTTGCCACAAAGA < 41bp 1 0.244296510427389 1 0.869473576545715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847605 chr17:39847625 . . 0 hm6A_associated_SNPs_18329 0 0 1 2 39847625 39847646 mRNA hsa-miR-190 EIF1 miRanda miRanda
14034 chr17 39847625 39847625 1 + G A rs548518093 39847605 + 39847585 39847625 41 ACCGCTAGCGAGGTGATAGGACATCTGGCTTGCCACAAAGG ACCGCTAGCGAGGTGATAGGACATCTGGCTTGCCACAAAGA < 41bp 1 0.244296510427389 1 0.869473576545715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847605 chr17:39847625 . . 0 hm6A_associated_SNPs_18329 0 0 1 2 39847612 39847635 mRNA hsa-miR-421 EIF1 miRanda miRanda
14034 chr17 39847820 39847820 1 + T G rs188337224 39847804 + 39847784 39847824 41 GCCCAATGCCATGTGAAGTAACAAACTGGTTTTTGGTTTTT GCCCAATGCCATGTGAAGTAACAAACTGGTTTTTGGGTTTT < 41bp 1 0.258270252607144 1 0.0991860032081604 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847804 chr17:39847820 . . 0 hm6A_associated_SNPs_18330 0 0 1 2 39847820 39847842 mRNA hsa-miR-320a EIF1 miRanda miRanda
14034 chr17 39847820 39847820 1 + T G rs188337224 39847804 + 39847784 39847824 41 GCCCAATGCCATGTGAAGTAACAAACTGGTTTTTGGTTTTT GCCCAATGCCATGTGAAGTAACAAACTGGTTTTTGGGTTTT < 41bp 1 0.258270252607144 1 0.0991860032081604 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847804 chr17:39847820 . . 0 hm6A_associated_SNPs_18330 0 0 1 2 39847820 39847842 mRNA hsa-miR-320b EIF1 miRanda miRanda
14034 chr17 39847820 39847820 1 + T G rs188337224 39847808 + 39847788 39847828 41 AATGCCATGTGAAGTAACAAACTGGTTTTTGGTTTTTTTTT AATGCCATGTGAAGTAACAAACTGGTTTTTGGGTTTTTTTT < 41bp 1 0.0836418563017191 1 0.0894272327423096 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847808 chr17:39847820 . . 0 hm6A_associated_SNPs_18331 0 0 1 2 39847820 39847842 mRNA hsa-miR-320a EIF1 miRanda miRanda
14034 chr17 39847820 39847820 1 + T G rs188337224 39847808 + 39847788 39847828 41 AATGCCATGTGAAGTAACAAACTGGTTTTTGGTTTTTTTTT AATGCCATGTGAAGTAACAAACTGGTTTTTGGGTTTTTTTT < 41bp 1 0.0836418563017191 1 0.0894272327423096 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847808 chr17:39847820 . . 0 hm6A_associated_SNPs_18331 0 0 1 2 39847820 39847842 mRNA hsa-miR-320b EIF1 miRanda miRanda
14034 chr17 39847884 39847884 1 + T G rs377128485 39847865 + 39847845 39847885 41 GTTATGTGTAATGTATTTAAACCCTTATTTAAATAAAACTT GTTATGTGTAATGTATTTAAACCCTTATTTAAATAAAACGT < 41bp 1 0.0526865625965965 1 0.048960953950882 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847865 chr17:39847884 . . 0 hm6A_associated_SNPs_18332 0 0 1 1 39847863 39847885 mRNA hsa-miR-590-3p EIF1 miRanda miRanda
14034 chr17 39979062 39979062 1 + T A rs1043002 39979075 + 39979055 39979095 41 AGCCCCTTTTCCTCTATGTGACAGCTCCCTAGGACCCCTCT AGCCCCTATTCCTCTATGTGACAGCTCCCTAGGACCCCTCT < 41bp 1 0.375372600030754 1 0.384827703237534 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31548708;GSE125780;DART-seq;HEK293T;Control 8 FKBP10 ENSG00000141756 UTR3 Human protein_coding chr17:39979075 chr17:39979062 . . 0 hm6A_associated_SNPs_18337 1 0 1 1 39979062 39979083 mRNA hsa-miR-122 FKBP10 miRanda miRanda
14034 chr17 39979081 39979081 1 + C G rs1043005 39979075 + 39979055 39979095 41 AGCCCCTTTTCCTCTATGTGACAGCTCCCTAGGACCCCTCT AGCCCCTTTTCCTCTATGTGACAGCTGCCTAGGACCCCTCT < 41bp 1 0.38392953484476 1 0.413358986377716 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31548708;GSE125780;DART-seq;HEK293T;Control 27 FKBP10 ENSG00000141756 UTR3 Human protein_coding chr17:39979075 chr17:39979081 . . 0 hm6A_associated_SNPs_18338 1 0 1 1 39979062 39979083 mRNA hsa-miR-122 FKBP10 miRanda miRanda
14034 chr17 39979082 39979082 1 + C G rs1043007 39979075 + 39979055 39979095 41 AGCCCCTTTTCCTCTATGTGACAGCTCCCTAGGACCCCTCT AGCCCCTTTTCCTCTATGTGACAGCTCGCTAGGACCCCTCT < 41bp 1 0.397434789573768 1 0.394195556640625 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31548708;GSE125780;DART-seq;HEK293T;Control 28 FKBP10 ENSG00000141756 UTR3 Human protein_coding chr17:39979075 chr17:39979082 . . 0 hm6A_associated_SNPs_18339 1 0 1 1 39979062 39979083 mRNA hsa-miR-122 FKBP10 miRanda miRanda
14034 chr17 40724402 40724402 1 + G A rs187151302 40724399 + 40724379 40724419 41 GTTACAATTTTGAAATATTAACTGAGCCTCAAAATCACCCT GTTACAATTTTGAAATATTAACTAAGCCTCAAAATCACCCT < 41bp 1 0.311723580808825 1 0.00387150049209595 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 MLX;PSMC3IP ENSG00000108788;ENSG00000131470 UTR3 Human other chr17:40724399 chr17:40724402 . . 0 hm6A_associated_SNPs_18357 0 0 1 2 40724386 40724407 mRNA hsa-miR-24 MLX miRanda miRanda
14034 chr17 40724402 40724402 1 + G A rs187151302 40724399 + 40724379 40724419 41 GTTACAATTTTGAAATATTAACTGAGCCTCAAAATCACCCT GTTACAATTTTGAAATATTAACTAAGCCTCAAAATCACCCT < 41bp 1 0.311723580808825 1 0.00387150049209595 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 MLX;PSMC3IP ENSG00000108788;ENSG00000131470 UTR3 Human other chr17:40724399 chr17:40724402 . . 0 hm6A_associated_SNPs_18357 0 0 1 2 40724388 40724409 mRNA hsa-miR-485-5p MLX miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-let-7a VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-let-7b VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931301 40931320 mRNA hsa-let-7c VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-let-7d VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-let-7e VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-let-7f VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-miR-98 VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-let-7g VPS25 miRanda miRanda
14034 chr17 40931314 40931314 1 + T C rs61754310 40931334 + 40931314 40931354 41 TACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT CACCTCCTTTCCCATCCTAGACTGTCCTTGAGCCAGGGTCT < 41bp 1 0.615266137314843 1 0.858286499977112 experiment 0.769467725370315 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931334 chr17:40931314 . . 0 hm6A_associated_SNPs_18368 0 0 1 9 40931299 40931320 mRNA hsa-let-7i VPS25 miRanda miRanda
14034 chr17 40962509 40962509 1 - A T rs11552192 40962516 - 40962496 40962536 41 CCCTTTCTTCTCTGAAAAAAACTAATTTAAATTTGCTTTTC CCCTTTCTTCTCTGAAAAAAACTAATTAAAATTTGCTTTTC < 41bp 1 0.402395047555827 1 0.367888182401657 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 28 BECN1;CNTD1 ENSG00000126581;ENSG00000176563 UTR3 Human other chr17:40962516 chr17:40962509 . . 0 hm6A_associated_SNPs_18369 0 0 1 1 40962492 40962513 mRNA hsa-miR-186 BECN1 miRanda miRanda
14034 chr17 41064657 41064657 1 + T C rs200704026 41064674 + 41064654 41064694 41 TCTTTTTTTTTTTTTTTGAGACAGGGTCTCACTATGTTGCC TCTCTTTTTTTTTTTTTGAGACAGGGTCTCACTATGTTGCC < 41bp 1 0.0177990577875203 1 0.000466048717498779 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 4 G6PC ENSG00000131482 UTR3 Human protein_coding chr17:41064674 chr17:41064657 . . 0 hm6A_associated_SNPs_18376 0 0 0 1 41064656 41064681 mRNA hsa-miR-10b G6PC miRanda miRanda
14034 chr17 41362272 41362272 1 + C G rs748620 41362271 + 41362251 41362291 41 GGAGCAAACTAAAGACCAGAACTTAAATTTTCACTTTAGAC GGAGCAAACTAAAGACCAGAAGTTAAATTTTCACTTTAGAC Direct Loss 1 0.622574723634246 1 0.946024060249329 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NBR1 ENSG00000188554 UTR3 Human protein_coding chr17:41362271 chr17:41362272 . . 0 hm6A_associated_SNPs_18382 0 0 1 7 41362263 41362288 mRNA hsa-miR-17 NBR1 miRanda miRanda
14034 chr17 41362272 41362272 1 + C G rs748620 41362271 + 41362251 41362291 41 GGAGCAAACTAAAGACCAGAACTTAAATTTTCACTTTAGAC GGAGCAAACTAAAGACCAGAAGTTAAATTTTCACTTTAGAC Direct Loss 1 0.622574723634246 1 0.946024060249329 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NBR1 ENSG00000188554 UTR3 Human protein_coding chr17:41362271 chr17:41362272 . . 0 hm6A_associated_SNPs_18382 0 0 1 7 41362263 41362288 mRNA hsa-miR-20a NBR1 miRanda miRanda
14034 chr17 41362272 41362272 1 + C G rs748620 41362271 + 41362251 41362291 41 GGAGCAAACTAAAGACCAGAACTTAAATTTTCACTTTAGAC GGAGCAAACTAAAGACCAGAAGTTAAATTTTCACTTTAGAC Direct Loss 1 0.622574723634246 1 0.946024060249329 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NBR1 ENSG00000188554 UTR3 Human protein_coding chr17:41362271 chr17:41362272 . . 0 hm6A_associated_SNPs_18382 0 0 1 7 41362266 41362288 mRNA hsa-miR-93 NBR1 miRanda miRanda
14034 chr17 41362272 41362272 1 + C G rs748620 41362271 + 41362251 41362291 41 GGAGCAAACTAAAGACCAGAACTTAAATTTTCACTTTAGAC GGAGCAAACTAAAGACCAGAAGTTAAATTTTCACTTTAGAC Direct Loss 1 0.622574723634246 1 0.946024060249329 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NBR1 ENSG00000188554 UTR3 Human protein_coding chr17:41362271 chr17:41362272 . . 0 hm6A_associated_SNPs_18382 0 0 1 7 41362263 41362288 mRNA hsa-miR-106a NBR1 miRanda miRanda
14034 chr17 41362272 41362272 1 + C G rs748620 41362271 + 41362251 41362291 41 GGAGCAAACTAAAGACCAGAACTTAAATTTTCACTTTAGAC GGAGCAAACTAAAGACCAGAAGTTAAATTTTCACTTTAGAC Direct Loss 1 0.622574723634246 1 0.946024060249329 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NBR1 ENSG00000188554 UTR3 Human protein_coding chr17:41362271 chr17:41362272 . . 0 hm6A_associated_SNPs_18382 0 0 1 7 41362268 41362288 mRNA hsa-miR-106b NBR1 miRanda miRanda
14034 chr17 41362272 41362272 1 + C G rs748620 41362271 + 41362251 41362291 41 GGAGCAAACTAAAGACCAGAACTTAAATTTTCACTTTAGAC GGAGCAAACTAAAGACCAGAAGTTAAATTTTCACTTTAGAC Direct Loss 1 0.622574723634246 1 0.946024060249329 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NBR1 ENSG00000188554 UTR3 Human protein_coding chr17:41362271 chr17:41362272 . . 0 hm6A_associated_SNPs_18382 0 0 1 7 41362263 41362288 mRNA hsa-miR-20b NBR1 miRanda miRanda
14034 chr17 41362272 41362272 1 + C G rs748620 41362271 + 41362251 41362291 41 GGAGCAAACTAAAGACCAGAACTTAAATTTTCACTTTAGAC GGAGCAAACTAAAGACCAGAAGTTAAATTTTCACTTTAGAC Direct Loss 1 0.622574723634246 1 0.946024060249329 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 NBR1 ENSG00000188554 UTR3 Human protein_coding chr17:41362271 chr17:41362272 . . 0 hm6A_associated_SNPs_18382 0 0 1 7 41362267 41362288 mRNA hsa-miR-519d NBR1 miRanda miRanda
14034 chr17 42745413 42745413 1 + T C rs61745789 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTCATGATGACTTAAGCCATTTGTACCCTT < 41bp 1 0.511039538068572 1 0.0237664580345154 experiment 0.977920923862856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745413 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_18400 0 0 0 4 42745404 42745424 mRNA hsa-miR-224 C17orf104 miRanda miRanda
14034 chr17 42745413 42745413 1 + T C rs61745789 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTCATGATGACTTAAGCCATTTGTACCCTT < 41bp 1 0.511039538068572 1 0.0237664580345154 experiment 0.977920923862856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745413 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_18400 0 0 0 4 42745408 42745431 mRNA hsa-miR-135a C17orf104 miRanda miRanda
14034 chr17 42745413 42745413 1 + T C rs61745789 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTCATGATGACTTAAGCCATTTGTACCCTT < 41bp 1 0.511039538068572 1 0.0237664580345154 experiment 0.977920923862856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745413 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_18400 0 0 0 4 42745408 42745431 mRNA hsa-miR-135b C17orf104 miRanda miRanda
14034 chr17 42745413 42745413 1 + T C rs61745789 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTCATGATGACTTAAGCCATTTGTACCCTT < 41bp 1 0.511039538068572 1 0.0237664580345154 experiment 0.977920923862856 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745413 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_18400 0 0 0 4 42745396 42745418 mRNA hsa-miR-376b C17orf104 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857564 + 42857544 42857584 41 TGACATCTACATTTTTTAAAACTGAATCTTAATCGATGAAT TGACATCTACATTTTTTAAAACTGAATCTTAATTGATGAAT < 41bp 1 0.398708625591126 1 0.82093870639801 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857564 chr17:42857577 . . 0 hm6A_associated_SNPs_18403 0 0 0 4 42857565 42857587 mRNA hsa-miR-181a ADAM11 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857564 + 42857544 42857584 41 TGACATCTACATTTTTTAAAACTGAATCTTAATCGATGAAT TGACATCTACATTTTTTAAAACTGAATCTTAATTGATGAAT < 41bp 1 0.398708625591126 1 0.82093870639801 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857564 chr17:42857577 . . 0 hm6A_associated_SNPs_18403 0 0 0 4 42857565 42857587 mRNA hsa-miR-181b ADAM11 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857564 + 42857544 42857584 41 TGACATCTACATTTTTTAAAACTGAATCTTAATCGATGAAT TGACATCTACATTTTTTAAAACTGAATCTTAATTGATGAAT < 41bp 1 0.398708625591126 1 0.82093870639801 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857564 chr17:42857577 . . 0 hm6A_associated_SNPs_18403 0 0 0 4 42857566 42857587 mRNA hsa-miR-181c ADAM11 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857564 + 42857544 42857584 41 TGACATCTACATTTTTTAAAACTGAATCTTAATCGATGAAT TGACATCTACATTTTTTAAAACTGAATCTTAATTGATGAAT < 41bp 1 0.398708625591126 1 0.82093870639801 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857564 chr17:42857577 . . 0 hm6A_associated_SNPs_18403 0 0 0 4 42857565 42857587 mRNA hsa-miR-181d ADAM11 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857589 + 42857569 42857609 41 ATCTTAATCGATGAATGTAAACTCGGGGGTGCTGGGGCCAG ATCTTAATTGATGAATGTAAACTCGGGGGTGCTGGGGCCAG < 41bp 1 0.325921180280269 1 0.829638004302979 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857589 chr17:42857577 . . 0 hm6A_associated_SNPs_18404 0 0 0 4 42857565 42857587 mRNA hsa-miR-181a ADAM11 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857589 + 42857569 42857609 41 ATCTTAATCGATGAATGTAAACTCGGGGGTGCTGGGGCCAG ATCTTAATTGATGAATGTAAACTCGGGGGTGCTGGGGCCAG < 41bp 1 0.325921180280269 1 0.829638004302979 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857589 chr17:42857577 . . 0 hm6A_associated_SNPs_18404 0 0 0 4 42857565 42857587 mRNA hsa-miR-181b ADAM11 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857589 + 42857569 42857609 41 ATCTTAATCGATGAATGTAAACTCGGGGGTGCTGGGGCCAG ATCTTAATTGATGAATGTAAACTCGGGGGTGCTGGGGCCAG < 41bp 1 0.325921180280269 1 0.829638004302979 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857589 chr17:42857577 . . 0 hm6A_associated_SNPs_18404 0 0 0 4 42857566 42857587 mRNA hsa-miR-181c ADAM11 miRanda miRanda
14034 chr17 42857577 42857577 1 + C T rs148345610 42857589 + 42857569 42857609 41 ATCTTAATCGATGAATGTAAACTCGGGGGTGCTGGGGCCAG ATCTTAATTGATGAATGTAAACTCGGGGGTGCTGGGGCCAG < 41bp 1 0.325921180280269 1 0.829638004302979 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857589 chr17:42857577 . . 0 hm6A_associated_SNPs_18404 0 0 0 4 42857565 42857587 mRNA hsa-miR-181d ADAM11 miRanda miRanda
14034 chr17 43227741 43227741 1 + T C rs545797773 43227725 + 43227705 43227745 41 ATGTGTATATAAGACAGTGGACCTTTTTATGACACATAATC ATGTGTATATAAGACAGTGGACCTTTTTATGACACACAATC < 41bp 1 0.440745664996274 1 0.999245762825012 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 37 HEXIM1 ENSG00000186834 UTR3 Human protein_coding chr17:43227725 chr17:43227741 . . 0 hm6A_associated_SNPs_18440 0 0 1 2 43227724 43227746 mRNA hsa-miR-190 HEXIM1 miRanda miRanda
14034 chr17 43227741 43227741 1 + T C rs545797773 43227725 + 43227705 43227745 41 ATGTGTATATAAGACAGTGGACCTTTTTATGACACATAATC ATGTGTATATAAGACAGTGGACCTTTTTATGACACACAATC < 41bp 1 0.440745664996274 1 0.999245762825012 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 37 HEXIM1 ENSG00000186834 UTR3 Human protein_coding chr17:43227725 chr17:43227741 . . 0 hm6A_associated_SNPs_18440 0 0 1 2 43227737 43227759 mRNA hsa-miR-876-5p HEXIM1 miRanda miRanda
14034 chr17 43707338 43707338 1 + G C rs73307579 43707334 + 43707314 43707354 41 ACAAACAAGTATCTCCAGTGACAGGAGTGCCTTCTGAGGCA ACAAACAAGTATCTCCAGTGACAGCAGTGCCTTCTGAGGCA < 41bp 1 0.0824250147630011 1 0.641487240791321 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 LINC02210 ENSG00000204650;ENSG00000263715 ncRNA_exonic Human other chr17:43707334 chr17:43707338 . . 0 hm6A_associated_SNPs_18441 0 0 1 3 43707327 43707347 mRNA hsa-miR-124 MGC57346 miRanda miRanda
14034 chr17 43707338 43707338 1 + G C rs73307579 43707334 + 43707314 43707354 41 ACAAACAAGTATCTCCAGTGACAGGAGTGCCTTCTGAGGCA ACAAACAAGTATCTCCAGTGACAGCAGTGCCTTCTGAGGCA < 41bp 1 0.0824250147630011 1 0.641487240791321 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 LINC02210 ENSG00000204650;ENSG00000263715 ncRNA_exonic Human other chr17:43707334 chr17:43707338 . . 0 hm6A_associated_SNPs_18441 0 0 1 3 43707316 43707339 mRNA hsa-miR-486-5p MGC57346 miRanda miRanda
14034 chr17 43707338 43707338 1 + G C rs73307579 43707334 + 43707314 43707354 41 ACAAACAAGTATCTCCAGTGACAGGAGTGCCTTCTGAGGCA ACAAACAAGTATCTCCAGTGACAGCAGTGCCTTCTGAGGCA < 41bp 1 0.0824250147630011 1 0.641487240791321 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 LINC02210 ENSG00000204650;ENSG00000263715 ncRNA_exonic Human other chr17:43707334 chr17:43707338 . . 0 hm6A_associated_SNPs_18441 0 0 1 3 43707327 43707347 mRNA hsa-miR-506 MGC57346 miRanda miRanda
14034 chr17 43714673 43714673 1 + A G rs241039 43714657 + 43714637 43714677 41 GCAAAGAGGCTCAGATTGGAACTTTTCCCTGAAACTATATT GCAAAGAGGCTCAGATTGGAACTTTTCCCTGAAACTGTATT < 41bp 1 0.335420583781049 1 0.489649027585983 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43714657 chr17:43714673 . . 0 hm6A_associated_SNPs_18444 0 0 1 3 43714662 43714683 mRNA hsa-miR-222 MGC57346 miRanda miRanda
14034 chr17 43714673 43714673 1 + A G rs241039 43714657 + 43714637 43714677 41 GCAAAGAGGCTCAGATTGGAACTTTTCCCTGAAACTATATT GCAAAGAGGCTCAGATTGGAACTTTTCCCTGAAACTGTATT < 41bp 1 0.335420583781049 1 0.489649027585983 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43714657 chr17:43714673 . . 0 hm6A_associated_SNPs_18444 0 0 1 3 43714669 43714689 mRNA hsa-miR-330-5p MGC57346 miRanda miRanda
14034 chr17 43714673 43714673 1 + A G rs241039 43714657 + 43714637 43714677 41 GCAAAGAGGCTCAGATTGGAACTTTTCCCTGAAACTATATT GCAAAGAGGCTCAGATTGGAACTTTTCCCTGAAACTGTATT < 41bp 1 0.335420583781049 1 0.489649027585983 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43714657 chr17:43714673 . . 0 hm6A_associated_SNPs_18444 0 0 1 3 43714670 43714689 mRNA hsa-miR-326 MGC57346 miRanda miRanda
14034 chr17 43714673 43714673 1 + A G rs241039 43714670 + 43714650 43714690 41 GATTGGAACTTTTCCCTGAAACTATATTGTAGCCCAGAGTT GATTGGAACTTTTCCCTGAAACTGTATTGTAGCCCAGAGTT < 41bp 1 0.351649510637342 1 0.355493307113647 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43714670 chr17:43714673 . . 0 hm6A_associated_SNPs_18445 0 0 1 3 43714662 43714683 mRNA hsa-miR-222 MGC57346 miRanda miRanda
14034 chr17 43714673 43714673 1 + A G rs241039 43714670 + 43714650 43714690 41 GATTGGAACTTTTCCCTGAAACTATATTGTAGCCCAGAGTT GATTGGAACTTTTCCCTGAAACTGTATTGTAGCCCAGAGTT < 41bp 1 0.351649510637342 1 0.355493307113647 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43714670 chr17:43714673 . . 0 hm6A_associated_SNPs_18445 0 0 1 3 43714669 43714689 mRNA hsa-miR-330-5p MGC57346 miRanda miRanda
14034 chr17 43714673 43714673 1 + A G rs241039 43714670 + 43714650 43714690 41 GATTGGAACTTTTCCCTGAAACTATATTGTAGCCCAGAGTT GATTGGAACTTTTCCCTGAAACTGTATTGTAGCCCAGAGTT < 41bp 1 0.351649510637342 1 0.355493307113647 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43714670 chr17:43714673 . . 0 hm6A_associated_SNPs_18445 0 0 1 3 43714670 43714689 mRNA hsa-miR-326 MGC57346 miRanda miRanda
14034 chr17 44834293 44834293 1 + C G rs567699958 44834303 + 44834283 44834323 41 ATTTGTCTTACAACTGACTGACTTAGCAGGAATTTAATTAG ATTTGTCTTAGAACTGACTGACTTAGCAGGAATTTAATTAG < 41bp 1 0.198206886110929 1 0.208166599273682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 NSF ENSG00000073969 UTR3 Human protein_coding chr17:44834303 chr17:44834293 . . 0 hm6A_associated_SNPs_18451 0 0 1 4 44834273 44834294 mRNA hsa-miR-30c NSF miRanda miRanda
14034 chr17 44834293 44834293 1 + C G rs567699958 44834303 + 44834283 44834323 41 ATTTGTCTTACAACTGACTGACTTAGCAGGAATTTAATTAG ATTTGTCTTAGAACTGACTGACTTAGCAGGAATTTAATTAG < 41bp 1 0.198206886110929 1 0.208166599273682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 NSF ENSG00000073969 UTR3 Human protein_coding chr17:44834303 chr17:44834293 . . 0 hm6A_associated_SNPs_18451 0 0 1 4 44834276 44834301 mRNA hsa-miR-223 NSF miRanda miRanda
14034 chr17 44834293 44834293 1 + C G rs567699958 44834303 + 44834283 44834323 41 ATTTGTCTTACAACTGACTGACTTAGCAGGAATTTAATTAG ATTTGTCTTAGAACTGACTGACTTAGCAGGAATTTAATTAG < 41bp 1 0.198206886110929 1 0.208166599273682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 NSF ENSG00000073969 UTR3 Human protein_coding chr17:44834303 chr17:44834293 . . 0 hm6A_associated_SNPs_18451 0 0 1 4 44834272 44834294 mRNA hsa-miR-30b NSF miRanda miRanda
14034 chr17 44834293 44834293 1 + C G rs567699958 44834303 + 44834283 44834323 41 ATTTGTCTTACAACTGACTGACTTAGCAGGAATTTAATTAG ATTTGTCTTAGAACTGACTGACTTAGCAGGAATTTAATTAG < 41bp 1 0.198206886110929 1 0.208166599273682 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 NSF ENSG00000073969 UTR3 Human protein_coding chr17:44834303 chr17:44834293 . . 0 hm6A_associated_SNPs_18451 0 0 1 4 44834292 44834313 mRNA hsa-miR-370 NSF miRanda miRanda
14034 chr17 44834393 44834393 1 + A G rs181109040 44834390 + 44834370 44834410 41 CTGCTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCATCC CTGCTGCTTAAAATGCAAGGACAGGCAATTAGAAGCCATCC < 41bp 1 0.286902533969239 1 0.0700795650482178 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 24 NSF ENSG00000073969 UTR3 Human protein_coding chr17:44834390 chr17:44834393 . . 0 hm6A_associated_SNPs_18452 0 0 0 2 44834388 44834409 mRNA hsa-miR-135a NSF miRanda miRanda
14034 chr17 44834393 44834393 1 + A G rs181109040 44834390 + 44834370 44834410 41 CTGCTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCATCC CTGCTGCTTAAAATGCAAGGACAGGCAATTAGAAGCCATCC < 41bp 1 0.286902533969239 1 0.0700795650482178 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 24 NSF ENSG00000073969 UTR3 Human protein_coding chr17:44834390 chr17:44834393 . . 0 hm6A_associated_SNPs_18452 0 0 0 2 44834388 44834409 mRNA hsa-miR-135b NSF miRanda miRanda
14034 chr17 45018037 45018037 1 + G A rs369846922 45018043 + 45018023 45018063 41 ATCATGCGTGGACTGATAGGACATCTTTTCGTGGTGTGCAC ATCATGCGTGGACTAATAGGACATCTTTTCGTGGTGTGCAC < 41bp 1 0.452053994620786 1 0.852057576179504 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 GOSR2 ENSG00000108433 UTR3 Human protein_coding chr17:45018043 chr17:45018037 . . 0 hm6A_associated_SNPs_18454 0 0 1 1 45018020 45018042 mRNA hsa-miR-139-5p GOSR2 miRanda miRanda
14034 chr17 45760429 45760429 1 + T A rs8070516 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTATGTTTAC < 41bp 1 0.2735131086678 1 0.0180324614048004 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760429 . . 0 hm6A_associated_SNPs_18463 0 0 1 7 45760414 45760437 mRNA hsa-miR-30a KPNB1 miRanda miRanda
14034 chr17 45760429 45760429 1 + T A rs8070516 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTATGTTTAC < 41bp 1 0.2735131086678 1 0.0180324614048004 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760429 . . 0 hm6A_associated_SNPs_18463 0 0 1 7 45760415 45760437 mRNA hsa-miR-30c KPNB1 miRanda miRanda
14034 chr17 45760429 45760429 1 + T A rs8070516 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTATGTTTAC < 41bp 1 0.2735131086678 1 0.0180324614048004 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760429 . . 0 hm6A_associated_SNPs_18463 0 0 1 7 45760416 45760437 mRNA hsa-miR-30d KPNB1 miRanda miRanda
14034 chr17 45760429 45760429 1 + T A rs8070516 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTATGTTTAC < 41bp 1 0.2735131086678 1 0.0180324614048004 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760429 . . 0 hm6A_associated_SNPs_18463 0 0 1 7 45760427 45760449 mRNA hsa-miR-218 KPNB1 miRanda miRanda
14034 chr17 45760429 45760429 1 + T A rs8070516 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTATGTTTAC < 41bp 1 0.2735131086678 1 0.0180324614048004 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760429 . . 0 hm6A_associated_SNPs_18463 0 0 1 7 45760415 45760437 mRNA hsa-miR-30b KPNB1 miRanda miRanda
14034 chr17 45760429 45760429 1 + T A rs8070516 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTATGTTTAC < 41bp 1 0.2735131086678 1 0.0180324614048004 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760429 . . 0 hm6A_associated_SNPs_18463 0 0 1 7 45760421 45760444 mRNA hsa-miR-153 KPNB1 miRanda miRanda
14034 chr17 45760429 45760429 1 + T A rs8070516 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTATGTTTAC < 41bp 1 0.2735131086678 1 0.0180324614048004 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760429 . . 0 hm6A_associated_SNPs_18463 0 0 1 7 45760414 45760437 mRNA hsa-miR-30e KPNB1 miRanda miRanda
14034 chr17 45760433 45760433 1 + T C rs8070520 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTCTAC < 41bp 1 0.301537117627551 1 0.0293210744857788 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760433 . . 0 hm6A_associated_SNPs_18464 0 0 1 7 45760414 45760437 mRNA hsa-miR-30a KPNB1 miRanda miRanda
14034 chr17 45760433 45760433 1 + T C rs8070520 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTCTAC < 41bp 1 0.301537117627551 1 0.0293210744857788 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760433 . . 0 hm6A_associated_SNPs_18464 0 0 1 7 45760415 45760437 mRNA hsa-miR-30c KPNB1 miRanda miRanda
14034 chr17 45760433 45760433 1 + T C rs8070520 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTCTAC < 41bp 1 0.301537117627551 1 0.0293210744857788 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760433 . . 0 hm6A_associated_SNPs_18464 0 0 1 7 45760416 45760437 mRNA hsa-miR-30d KPNB1 miRanda miRanda
14034 chr17 45760433 45760433 1 + T C rs8070520 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTCTAC < 41bp 1 0.301537117627551 1 0.0293210744857788 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760433 . . 0 hm6A_associated_SNPs_18464 0 0 1 7 45760427 45760449 mRNA hsa-miR-218 KPNB1 miRanda miRanda
14034 chr17 45760433 45760433 1 + T C rs8070520 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTCTAC < 41bp 1 0.301537117627551 1 0.0293210744857788 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760433 . . 0 hm6A_associated_SNPs_18464 0 0 1 7 45760415 45760437 mRNA hsa-miR-30b KPNB1 miRanda miRanda
14034 chr17 45760433 45760433 1 + T C rs8070520 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTCTAC < 41bp 1 0.301537117627551 1 0.0293210744857788 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760433 . . 0 hm6A_associated_SNPs_18464 0 0 1 7 45760421 45760444 mRNA hsa-miR-153 KPNB1 miRanda miRanda
14034 chr17 45760433 45760433 1 + T C rs8070520 45760416 + 45760396 45760436 41 TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTTTAC TAGATGTTGCATTTCATAAAACTAACCGAAGTTTTGTCTAC < 41bp 1 0.301537117627551 1 0.0293210744857788 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760416 chr17:45760433 . . 0 hm6A_associated_SNPs_18464 0 0 1 7 45760414 45760437 mRNA hsa-miR-30e KPNB1 miRanda miRanda
14034 chr17 45760746 45760746 1 + A G rs142967465 45760740 + 45760720 45760760 41 AATTGTTACAAATAACGCAGACTTCAAAAACAAAAAAATCA AATTGTTACAAATAACGCAGACTTCAGAAACAAAAAAATCA < 41bp 1 0.180612883018753 1 0.905561208724976 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760740 chr17:45760746 . . 0 hm6A_associated_SNPs_18465 0 0 1 1 45760730 45760750 mRNA hsa-miR-129-5p KPNB1 miRanda miRanda
14034 chr17 45760746 45760746 1 + A G rs142967465 45760749 + 45760729 45760769 41 AAATAACGCAGACTTCAAAAACAAAAAAATCACAACCCAAA AAATAACGCAGACTTCAGAAACAAAAAAATCACAACCCAAA < 41bp 1 0.285191829087039 1 0.851615011692047 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760749 chr17:45760746 . . 0 hm6A_associated_SNPs_18466 0 0 1 1 45760730 45760750 mRNA hsa-miR-129-5p KPNB1 miRanda miRanda
14034 chr17 45760814 45760814 1 + G A rs191906951 45760825 + 45760805 45760845 41 AAAGAAAACGCCCTCTCCTGACTTGTATTGTGGCAGTCTGA AAAGAAAACACCCTCTCCTGACTTGTATTGTGGCAGTCTGA < 41bp 1 0.222508347921533 1 0.451471865177155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760825 chr17:45760814 . . 0 hm6A_associated_SNPs_18467 0 0 1 2 45760812 45760833 mRNA hsa-miR-381 KPNB1 miRanda miRanda
14034 chr17 45760814 45760814 1 + G A rs191906951 45760825 + 45760805 45760845 41 AAAGAAAACGCCCTCTCCTGACTTGTATTGTGGCAGTCTGA AAAGAAAACACCCTCTCCTGACTTGTATTGTGGCAGTCTGA < 41bp 1 0.222508347921533 1 0.451471865177155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 KPNB1 ENSG00000108424 UTR3 Human protein_coding chr17:45760825 chr17:45760814 . . 0 hm6A_associated_SNPs_18467 0 0 1 2 45760810 45760833 mRNA hsa-miR-300 KPNB1 miRanda miRanda
14034 chr17 46005968 46005968 1 + T C rs115128706 46005983 + 46005963 46006003 41 CTAAATGACACAGCATTTAAACTCAAATCTGGATTCAGATA CTAAACGACACAGCATTTAAACTCAAATCTGGATTCAGATA < 41bp 1 0.502911006812016 1 0.937705278396606 experiment 0.994177986375968 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 SP2-AS1 ENSG00000234494 ncRNA_intronic Human antisense chr17:46005983 chr17:46005968 . . 0 hm6A_associated_SNPs_18470 0 0 1 1 46005958 46005976 mRNA hsa-miR-599 SP2 miRanda miRanda
14034 chr17 46024660 46024660 1 + A C rs7220104 46024646 + 46024626 46024666 41 TCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTC TCATTCATAGCAGCCAGGAAACAATAGGAACCAACAGCCTC < 41bp 1 0.437102792069355 1 0.00859940052032471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PNPO ENSG00000263798;ENSG00000264019 ncRNA_intronic Human other chr17:46024646 chr17:46024660 . . 0 hm6A_associated_SNPs_18471 1 0 1 6 46024657 46024678 mRNA hsa-miR-15a PNPO miRanda miRanda
14034 chr17 46024660 46024660 1 + A C rs7220104 46024646 + 46024626 46024666 41 TCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTC TCATTCATAGCAGCCAGGAAACAATAGGAACCAACAGCCTC < 41bp 1 0.437102792069355 1 0.00859940052032471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PNPO ENSG00000263798;ENSG00000264019 ncRNA_intronic Human other chr17:46024646 chr17:46024660 . . 0 hm6A_associated_SNPs_18471 1 0 1 6 46024654 46024678 mRNA hsa-miR-16 PNPO miRanda miRanda
14034 chr17 46024660 46024660 1 + A C rs7220104 46024646 + 46024626 46024666 41 TCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTC TCATTCATAGCAGCCAGGAAACAATAGGAACCAACAGCCTC < 41bp 1 0.437102792069355 1 0.00859940052032471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PNPO ENSG00000263798;ENSG00000264019 ncRNA_intronic Human other chr17:46024646 chr17:46024660 . . 0 hm6A_associated_SNPs_18471 1 0 1 6 46024657 46024678 mRNA hsa-miR-15b PNPO miRanda miRanda
14034 chr17 46024660 46024660 1 + A C rs7220104 46024646 + 46024626 46024666 41 TCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTC TCATTCATAGCAGCCAGGAAACAATAGGAACCAACAGCCTC < 41bp 1 0.437102792069355 1 0.00859940052032471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PNPO ENSG00000263798;ENSG00000264019 ncRNA_intronic Human other chr17:46024646 chr17:46024660 . . 0 hm6A_associated_SNPs_18471 1 0 1 6 46024656 46024678 mRNA hsa-miR-195 PNPO miRanda miRanda
14034 chr17 46024660 46024660 1 + A C rs7220104 46024646 + 46024626 46024666 41 TCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTC TCATTCATAGCAGCCAGGAAACAATAGGAACCAACAGCCTC < 41bp 1 0.437102792069355 1 0.00859940052032471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PNPO ENSG00000263798;ENSG00000264019 ncRNA_intronic Human other chr17:46024646 chr17:46024660 . . 0 hm6A_associated_SNPs_18471 1 0 1 6 46024656 46024678 mRNA hsa-miR-424 PNPO miRanda miRanda
14034 chr17 46024660 46024660 1 + A C rs7220104 46024646 + 46024626 46024666 41 TCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTC TCATTCATAGCAGCCAGGAAACAATAGGAACCAACAGCCTC < 41bp 1 0.437102792069355 1 0.00859940052032471 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PNPO ENSG00000263798;ENSG00000264019 ncRNA_intronic Human other chr17:46024646 chr17:46024660 . . 0 hm6A_associated_SNPs_18471 1 0 1 6 46024658 46024678 mRNA hsa-miR-497 PNPO miRanda miRanda
14034 chr17 46138303 46138303 1 + C G rs577426443 46138299 + 46138279 46138319 41 ATGTTCTCTTTGCCATAAAGACTCCGTGTAACTGTGTGAAC ATGTTCTCTTTGCCATAAAGACTCGGTGTAACTGTGTGAAC < 41bp 1 0.419752073754981 1 0.795682847499847 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 NFE2L1 ENSG00000082641 UTR3 Human protein_coding chr17:46138299 chr17:46138303 . . 0 hm6A_associated_SNPs_18483 0 0 1 1 46138294 46138318 mRNA hsa-miR-377 NFE2L1 miRanda miRanda
14034 chr17 46138303 46138303 1 + C G rs577426443 46138309 + 46138289 46138329 41 TGCCATAAAGACTCCGTGTAACTGTGTGAACACTTGGGATT TGCCATAAAGACTCGGTGTAACTGTGTGAACACTTGGGATT < 41bp 1 0.433813222053541 1 0.582393109798431 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 NFE2L1 ENSG00000082641 UTR3 Human protein_coding chr17:46138309 chr17:46138303 . . 0 hm6A_associated_SNPs_18484 0 0 1 1 46138294 46138318 mRNA hsa-miR-377 NFE2L1 miRanda miRanda
14034 chr17 46138303 46138303 1 + C G rs577426443 46138318 + 46138298 46138338 41 GACTCCGTGTAACTGTGTGAACACTTGGGATTTTTCTCCTC GACTCGGTGTAACTGTGTGAACACTTGGGATTTTTCTCCTC < 41bp 1 0.707559843593458 1 0.469638258218765 experiment 0.584880312813083 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 6 NFE2L1 ENSG00000082641 UTR3 Human protein_coding chr17:46138318 chr17:46138303 . . 0 hm6A_associated_SNPs_18485 0 0 1 1 46138294 46138318 mRNA hsa-miR-377 NFE2L1 miRanda miRanda
14034 chr17 47006098 47006098 1 + G A rs145544916 47006106 + 47006086 47006126 41 CACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTC CACATGAAGATCAAAAAGGGACCCTGCTTCCAATTTCCCTC < 41bp 1 0.169118800476889 1 0.801596701145172 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 UBE2Z ENSG00000159202 UTR3 Human protein_coding chr17:47006106 chr17:47006098 . . 0 hm6A_associated_SNPs_18494 0 0 1 2 47006085 47006107 mRNA hsa-miR-204 UBE2Z miRanda miRanda
14034 chr17 47006098 47006098 1 + G A rs145544916 47006106 + 47006086 47006126 41 CACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTC CACATGAAGATCAAAAAGGGACCCTGCTTCCAATTTCCCTC < 41bp 1 0.169118800476889 1 0.801596701145172 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 UBE2Z ENSG00000159202 UTR3 Human protein_coding chr17:47006106 chr17:47006098 . . 0 hm6A_associated_SNPs_18494 0 0 1 2 47006087 47006107 mRNA hsa-miR-211 UBE2Z miRanda miRanda
14034 chr17 48167290 48167290 1 + C T rs80321467 48167282 + 48167262 48167302 41 GCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCA GCCTCTCTCCTTGGCCACAGACTGAACTTGCAGGGAATGCA < 41bp 1 0.782055796193965 1 0.990572452545166 experiment 0.43588840761207 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48167282 chr17:48167290 . . 0 hm6A_associated_SNPs_18517 0 0 0 1 48167287 48167308 mRNA hsa-miR-370 ITGA3 miRanda miRanda
14034 chr17 48167290 48167290 1 + C T rs80321467 48167287 + 48167267 48167307 41 TCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGG TCTCCTTGGCCACAGACTGAACTTGCAGGGAATGCAGCAGG < 41bp 1 0.64541184575163 1 0.980960786342621 experiment 0.709176308496741 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48167287 chr17:48167290 . . 0 hm6A_associated_SNPs_18518 0 0 0 1 48167287 48167308 mRNA hsa-miR-370 ITGA3 miRanda miRanda
14034 chr17 48167291 48167291 1 + G A rs140332297 48167287 + 48167267 48167307 41 TCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGG TCTCCTTGGCCACAGACTGAACTCACAGGGAATGCAGCAGG < 41bp 1 0.650795272761969 1 0.975854873657227 experiment 0.698409454476062 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48167287 chr17:48167291 . . 0 hm6A_associated_SNPs_18519 0 0 0 1 48167287 48167308 mRNA hsa-miR-370 ITGA3 miRanda miRanda
14034 chr17 48167292 48167292 1 + C A rs75975416 48167287 + 48167267 48167307 41 TCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGG TCTCCTTGGCCACAGACTGAACTCGAAGGGAATGCAGCAGG < 41bp 1 0.616157011995464 1 0.985039889812469 experiment 0.767685976009071 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48167287 chr17:48167292 . . 0 hm6A_associated_SNPs_18520 0 0 0 1 48167287 48167308 mRNA hsa-miR-370 ITGA3 miRanda miRanda
14034 chr17 48167298 48167298 1 + A G rs2078864 48167287 + 48167267 48167307 41 TCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGG TCTCCTTGGCCACAGACTGAACTCGCAGGGAGTGCAGCAGG < 41bp 1 0.609576013673095 1 0.966587841510773 experiment 0.780847972653809 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48167287 chr17:48167298 . . 0 hm6A_associated_SNPs_18521 0 0 0 1 48167287 48167308 mRNA hsa-miR-370 ITGA3 miRanda miRanda
14034 chr17 48167298 48167298 1 + A G rs2078864 48167313 + 48167293 48167333 41 AGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAA AGGGAGTGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAA < 41bp 1 0.638189842005582 1 0.941611051559448 experiment 0.723620315988836 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48167313 chr17:48167298 . . 0 hm6A_associated_SNPs_18522 0 0 0 1 48167287 48167308 mRNA hsa-miR-370 ITGA3 miRanda miRanda
14034 chr17 48437968 48437968 1 + T C rs9898777 48437986 + 48437966 48438006 41 AATGGGTGGTTGGGAGAGAAACTAGAACAGAAGATGTGCAA AACGGGTGGTTGGGAGAGAAACTAGAACAGAAGATGTGCAA < 41bp 1 0.426938526274668 1 0.587551951408386 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 XYLT2 ENSG00000015532 UTR3 Human protein_coding chr17:48437986 chr17:48437968 . . 0 hm6A_associated_SNPs_18526 0 0 1 1 48437960 48437982 mRNA hsa-miR-150 XYLT2 miRanda miRanda
14034 chr17 48458766 48458766 1 + C T rs114758981 48458750 + 48458730 48458770 41 GGATTATGATGACTATGCGGACTTCTATATTGTCTTCATCT GGATTATGATGACTATGCGGACTTCTATATTGTCTTTATCT < 41bp 1 0.20390689316248 1 0.939922332763672 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 EME1;LRRC59 ENSG00000108829;ENSG00000154920 UTR3 Human other chr17:48458750 chr17:48458766 . . 0 hm6A_associated_SNPs_18538 0 0 1 4 48458751 48458772 mRNA hsa-miR-143 EME1 miRanda miRanda
14034 chr17 48458766 48458766 1 + C T rs114758981 48458750 + 48458730 48458770 41 GGATTATGATGACTATGCGGACTTCTATATTGTCTTCATCT GGATTATGATGACTATGCGGACTTCTATATTGTCTTTATCT < 41bp 1 0.20390689316248 1 0.939922332763672 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 EME1;LRRC59 ENSG00000108829;ENSG00000154920 UTR3 Human other chr17:48458750 chr17:48458766 . . 0 hm6A_associated_SNPs_18538 0 0 1 4 48458760 48458781 mRNA hsa-miR-362-3p EME1 miRanda miRanda
14034 chr17 48458766 48458766 1 + C T rs114758981 48458750 + 48458730 48458770 41 GGATTATGATGACTATGCGGACTTCTATATTGTCTTCATCT GGATTATGATGACTATGCGGACTTCTATATTGTCTTTATCT < 41bp 1 0.20390689316248 1 0.939922332763672 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 EME1;LRRC59 ENSG00000108829;ENSG00000154920 UTR3 Human other chr17:48458750 chr17:48458766 . . 0 hm6A_associated_SNPs_18538 0 0 1 4 48458760 48458781 mRNA hsa-miR-377 EME1 miRanda miRanda
14034 chr17 48458766 48458766 1 + C T rs114758981 48458750 + 48458730 48458770 41 GGATTATGATGACTATGCGGACTTCTATATTGTCTTCATCT GGATTATGATGACTATGCGGACTTCTATATTGTCTTTATCT < 41bp 1 0.20390689316248 1 0.939922332763672 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 EME1;LRRC59 ENSG00000108829;ENSG00000154920 UTR3 Human other chr17:48458750 chr17:48458766 . . 0 hm6A_associated_SNPs_18538 0 0 1 4 48458760 48458781 mRNA hsa-miR-329 EME1 miRanda miRanda
14034 chr17 48768664 48768664 1 + C G rs146326566 48768654 + 48768634 48768674 41 CAGAATGGACTTGATAGCAAACACTGGGGGCACCTTAAGAT CAGAATGGACTTGATAGCAAACACTGGGGGGACCTTAAGAT < 41bp 1 0.365966815479794 1 0.905256152153015 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 ABCC3 ENSG00000108846 UTR3 Human protein_coding chr17:48768654 chr17:48768664 . . 0 hm6A_associated_SNPs_18553 0 0 0 5 48768648 48768670 mRNA hsa-miR-18a ABCC3 miRanda miRanda
14034 chr17 48768664 48768664 1 + C G rs146326566 48768654 + 48768634 48768674 41 CAGAATGGACTTGATAGCAAACACTGGGGGCACCTTAAGAT CAGAATGGACTTGATAGCAAACACTGGGGGGACCTTAAGAT < 41bp 1 0.365966815479794 1 0.905256152153015 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 ABCC3 ENSG00000108846 UTR3 Human protein_coding chr17:48768654 chr17:48768664 . . 0 hm6A_associated_SNPs_18553 0 0 0 5 48768659 48768682 mRNA hsa-miR-19a ABCC3 miRanda miRanda
14034 chr17 48768664 48768664 1 + C G rs146326566 48768654 + 48768634 48768674 41 CAGAATGGACTTGATAGCAAACACTGGGGGCACCTTAAGAT CAGAATGGACTTGATAGCAAACACTGGGGGGACCTTAAGAT < 41bp 1 0.365966815479794 1 0.905256152153015 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 ABCC3 ENSG00000108846 UTR3 Human protein_coding chr17:48768654 chr17:48768664 . . 0 hm6A_associated_SNPs_18553 0 0 0 5 48768660 48768682 mRNA hsa-miR-19b ABCC3 miRanda miRanda
14034 chr17 48768664 48768664 1 + C G rs146326566 48768654 + 48768634 48768674 41 CAGAATGGACTTGATAGCAAACACTGGGGGCACCTTAAGAT CAGAATGGACTTGATAGCAAACACTGGGGGGACCTTAAGAT < 41bp 1 0.365966815479794 1 0.905256152153015 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 ABCC3 ENSG00000108846 UTR3 Human protein_coding chr17:48768654 chr17:48768664 . . 0 hm6A_associated_SNPs_18553 0 0 0 5 48768663 48768685 mRNA hsa-miR-125a-3p ABCC3 miRanda miRanda
14034 chr17 48768664 48768664 1 + C G rs146326566 48768654 + 48768634 48768674 41 CAGAATGGACTTGATAGCAAACACTGGGGGCACCTTAAGAT CAGAATGGACTTGATAGCAAACACTGGGGGGACCTTAAGAT < 41bp 1 0.365966815479794 1 0.905256152153015 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 ABCC3 ENSG00000108846 UTR3 Human protein_coding chr17:48768654 chr17:48768664 . . 0 hm6A_associated_SNPs_18553 0 0 0 5 48768648 48768670 mRNA hsa-miR-18b ABCC3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828953 48828974 mRNA hsa-miR-203 LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828954 48828973 mRNA hsa-miR-122 LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828950 48828973 mRNA hsa-miR-142-3p LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828950 48828972 mRNA hsa-miR-302a LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828950 48828972 mRNA hsa-miR-302b LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828949 48828972 mRNA hsa-miR-302d LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828948 48828972 mRNA hsa-miR-373 LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828950 48828972 mRNA hsa-miR-520e LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828949 48828972 mRNA hsa-miR-520b LUC7L3 miRanda miRanda
14034 chr17 48828958 48828958 1 + T C rs190036537 48828966 + 48828946 48828986 41 AAGAATTTTAAATACAATAAACACTTCATATTATTCGCCTT AAGAATTTTAAACACAATAAACACTTCATATTATTCGCCTT < 41bp 1 0.445574890694551 1 0.225301265716553 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 LUC7L3 ENSG00000108848 UTR3 Human protein_coding chr17:48828966 chr17:48828958 . . 0 hm6A_associated_SNPs_18555 0 0 1 10 48828948 48828972 mRNA hsa-miR-520c-3p LUC7L3 miRanda miRanda
14034 chr17 53039315 53039315 1 + C T rs4829 53039314 + 53039294 53039334 41 ACAAATAAATCACTATTAAAACAATTTAATACTTTTTTTTT ACAAATAAATCACTATTAAAATAATTTAATACTTTTTTTTT Direct Loss 1 0.0741942178063279 1 0.0335718095302582 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 22 COX11;TOM1L1 ENSG00000166260 UTR3 Human protein_coding chr17:53039314 chr17:53039315 . . 0 hm6A_associated_SNPs_18580 0 0 1 3 53039308 53039328 mRNA hsa-miR-144 TOM1L1 miRanda miRanda
14034 chr17 53039315 53039315 1 + C T rs4829 53039314 + 53039294 53039334 41 ACAAATAAATCACTATTAAAACAATTTAATACTTTTTTTTT ACAAATAAATCACTATTAAAATAATTTAATACTTTTTTTTT Direct Loss 1 0.0741942178063279 1 0.0335718095302582 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 22 COX11;TOM1L1 ENSG00000166260 UTR3 Human protein_coding chr17:53039314 chr17:53039315 . . 0 hm6A_associated_SNPs_18580 0 0 1 3 53039298 53039321 mRNA hsa-miR-382 TOM1L1 miRanda miRanda
14034 chr17 53039315 53039315 1 + C T rs4829 53039314 + 53039294 53039334 41 ACAAATAAATCACTATTAAAACAATTTAATACTTTTTTTTT ACAAATAAATCACTATTAAAATAATTTAATACTTTTTTTTT Direct Loss 1 0.0741942178063279 1 0.0335718095302582 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 22 COX11;TOM1L1 ENSG00000166260 UTR3 Human protein_coding chr17:53039314 chr17:53039315 . . 0 hm6A_associated_SNPs_18580 0 0 1 3 53039307 53039328 mRNA hsa-miR-496 TOM1L1 miRanda miRanda
14034 chr17 53399928 53399928 1 + G A rs16955862 53399920 + 53399900 53399940 41 CTTTAAATTAAAATTTTATGACAGTATCGAGGCTTGTGATG CTTTAAATTAAAATTTTATGACAGTATCAAGGCTTGTGATG < 41bp 1 0.0598472146769626 1 0.756988048553467 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 29 HLF ENSG00000108924 UTR3 Human protein_coding chr17:53399920 chr17:53399928 . . 0 hm6A_associated_SNPs_18582 0 0 0 1 53399905 53399928 mRNA hsa-miR-190 HLF miRanda miRanda
14034 chr17 53854141 53854141 1 + T C rs2303506 53854126 + 53854106 53854146 41 GGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAA GGAGAAGTATCAGAGGCCTGACCGGACACATAATACGACAA < 41bp 1 0.0988230871650865 1 0.862290263175964 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 36 PCTP ENSG00000141179 UTR3 Human protein_coding chr17:53854126 chr17:53854141 . . 0 hm6A_associated_SNPs_18583 0 0 1 1 53854126 53854146 mRNA hsa-miR-448 PCTP miRanda miRanda
14034 chr17 55083806 55083806 1 + A C rs187499605 55083792 + 55083772 55083812 41 TATTTCTGCTTCTTAAAAAAACCTAAGATTTTTTAAAAAAT TATTTCTGCTTCTTAAAAAAACCTAAGATTTTTTCAAAAAT < 41bp 1 0.118445440754345 1 0.806546688079834 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 SCPEP1 ENSG00000121064 UTR3 Human protein_coding chr17:55083792 chr17:55083806 . . 0 hm6A_associated_SNPs_18591 0 0 0 1 55083794 55083814 mRNA hsa-miR-590-3p SCPEP1 miRanda miRanda
14034 chr17 55197912 55197912 1 + A T rs533544374 55197896 + 55197876 55197916 41 AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCT AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTTTGCT < 41bp 1 0.637756850708353 1 0.759010136127472 experiment 0.724486298583294 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 37 AKAP1 ENSG00000121057 UTR3 Human protein_coding chr17:55197896 chr17:55197912 . . 0 hm6A_associated_SNPs_18593 0 0 1 1 55197898 55197919 mRNA hsa-miR-338-3p AKAP1 miRanda miRanda
14034 chr17 55197914 55197914 1 + G A rs3095505 55197896 + 55197876 55197916 41 AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCT AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATACT < 41bp 1 0.631082299892715 1 0.763417959213257 experiment 0.73783540021457 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 AKAP1 ENSG00000121057 UTR3 Human protein_coding chr17:55197896 chr17:55197914 . . 0 hm6A_associated_SNPs_18594 0 0 1 1 55197898 55197919 mRNA hsa-miR-338-3p AKAP1 miRanda miRanda
14034 chr17 55198233 55198233 1 + A G rs62060308 55198218 + 55198198 55198238 41 AACTTCATTTAGGTCTCTAAACACAGACTTTTTAAATTGCA AACTTCATTTAGGTCTCTAAACACAGACTTTTTAAGTTGCA < 41bp 1 0.377763353957505 1 0.821858644485474 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 AKAP1 ENSG00000121057 UTR3 Human protein_coding chr17:55198218 chr17:55198233 . . 0 hm6A_associated_SNPs_18596 0 0 1 3 55198224 55198246 mRNA hsa-miR-139-5p AKAP1 miRanda miRanda
14034 chr17 55198233 55198233 1 + A G rs62060308 55198218 + 55198198 55198238 41 AACTTCATTTAGGTCTCTAAACACAGACTTTTTAAATTGCA AACTTCATTTAGGTCTCTAAACACAGACTTTTTAAGTTGCA < 41bp 1 0.377763353957505 1 0.821858644485474 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 AKAP1 ENSG00000121057 UTR3 Human protein_coding chr17:55198218 chr17:55198233 . . 0 hm6A_associated_SNPs_18596 0 0 1 3 55198221 55198242 mRNA hsa-miR-130a AKAP1 miRanda miRanda
14034 chr17 55198233 55198233 1 + A G rs62060308 55198218 + 55198198 55198238 41 AACTTCATTTAGGTCTCTAAACACAGACTTTTTAAATTGCA AACTTCATTTAGGTCTCTAAACACAGACTTTTTAAGTTGCA < 41bp 1 0.377763353957505 1 0.821858644485474 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 AKAP1 ENSG00000121057 UTR3 Human protein_coding chr17:55198218 chr17:55198233 . . 0 hm6A_associated_SNPs_18596 0 0 1 3 55198221 55198242 mRNA hsa-miR-130b AKAP1 miRanda miRanda
14034 chr17 55198420 55198420 1 + C T rs6967 55198410 + 55198390 55198430 41 TACACTGGAGAACAAAGGGAACTCAAGATTCTTCCAGCCAC TACACTGGAGAACAAAGGGAACTCAAGATTTTTCCAGCCAC < 41bp 1 0.463279455963687 1 0.89489883184433 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 AKAP1 ENSG00000121057 UTR3 Human protein_coding chr17:55198410 chr17:55198420 . . 0 hm6A_associated_SNPs_18597 0 0 1 1 55198418 55198441 mRNA hsa-miR-125a-3p AKAP1 miRanda miRanda
14034 chr17 55709699 55709699 1 + G A rs3760162 55709679 + 55709659 55709699 41 AGGTGAACACACAGAGACAGACTATTCTCTAAGAATGTGAG AGGTGAACACACAGAGACAGACTATTCTCTAAGAATGTGAA < 41bp 1 0.640713109784135 1 0.936792433261871 experiment 0.71857378043173 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 41 MSI2 ENSG00000153944 UTR3 Human protein_coding chr17:55709679 chr17:55709699 . . 0 hm6A_associated_SNPs_18598 0 0 0 2 55709679 55709699 mRNA hsa-miR-23a MSI2 miRanda miRanda
14034 chr17 55709699 55709699 1 + G A rs3760162 55709679 + 55709659 55709699 41 AGGTGAACACACAGAGACAGACTATTCTCTAAGAATGTGAG AGGTGAACACACAGAGACAGACTATTCTCTAAGAATGTGAA < 41bp 1 0.640713109784135 1 0.936792433261871 experiment 0.71857378043173 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 41 MSI2 ENSG00000153944 UTR3 Human protein_coding chr17:55709679 chr17:55709699 . . 0 hm6A_associated_SNPs_18598 0 0 0 2 55709679 55709699 mRNA hsa-miR-23b MSI2 miRanda miRanda
14034 chr17 56167359 56167359 1 + T C rs114946955 56167361 + 56167341 56167381 41 TCTTCCTGCCAGAGATCATGACAGGAGGATGCTGGGGTAGG TCTTCCTGCCAGAGATCACGACAGGAGGATGCTGGGGTAGG Direct Loss 1 0.663507509388 1 0.000142216682434082 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 19 DYNLL2 ENSG00000264364 UTR3 Human protein_coding chr17:56167361 chr17:56167359 . . 0 hm6A_associated_SNPs_18599 0 0 1 2 56167356 56167376 mRNA hsa-miR-338-3p DYNLL2 miRanda miRanda
14034 chr17 56167359 56167359 1 + T C rs114946955 56167361 + 56167341 56167381 41 TCTTCCTGCCAGAGATCATGACAGGAGGATGCTGGGGTAGG TCTTCCTGCCAGAGATCACGACAGGAGGATGCTGGGGTAGG Direct Loss 1 0.663507509388 1 0.000142216682434082 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 19 DYNLL2 ENSG00000264364 UTR3 Human protein_coding chr17:56167361 chr17:56167359 . . 0 hm6A_associated_SNPs_18599 0 0 1 2 56167341 56167362 mRNA hsa-miR-433 DYNLL2 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262484 57262505 mRNA hsa-miR-25 PRR11 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262484 57262505 mRNA hsa-miR-32 PRR11 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262484 57262505 mRNA hsa-miR-92a PRR11 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262484 57262506 mRNA hsa-miR-137 PRR11 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262484 57262505 mRNA hsa-miR-363 PRR11 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262486 57262505 mRNA hsa-miR-367 PRR11 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262484 57262505 mRNA hsa-miR-92b PRR11 miRanda miRanda
14034 chr17 57262495 57262495 1 + G A rs141103491 57262515 + 57262495 57262535 41 GAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA AAGATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATA < 41bp 1 0.774953501608634 1 0.804589152336121 experiment 0.450092996782733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262515 chr17:57262495 nonsynonymous SNV 0.739 0 hm6A_associated_SNPs_18605 0 0 1 8 57262476 57262501 mRNA hsa-miR-216b PRR11 miRanda miRanda
14034 chr17 57685423 57685423 1 + G A rs539740069 57685412 + 57685392 57685432 41 TTTAACTTCCATTATGCCAAACTTGGGATGGGATTTTCGAA TTTAACTTCCATTATGCCAAACTTGGGATGGAATTTTCGAA < 41bp 1 0.267593572243272 1 0.185625523328781 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 DHX40 ENSG00000108406 UTR3 Human protein_coding chr17:57685412 chr17:57685423 . . 0 hm6A_associated_SNPs_18614 0 0 1 1 57685417 57685439 mRNA hsa-miR-346 DHX40 miRanda miRanda
14034 chr17 57917281 57917281 1 + A G rs200069029 57917264 + 57917244 57917284 41 GGTTGAACTCAGAGGAGAAAACTAAATAAGTAGAGAAAGTT GGTTGAACTCAGAGGAGAAAACTAAATAAGTAGAGAAGGTT < 41bp 1 0.457993116237329 1 0.764537334442139 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 VMP1 ENSG00000062716 UTR3 Human protein_coding chr17:57917264 chr17:57917281 . . 0 hm6A_associated_SNPs_18621 0 0 1 1 57917277 57917298 mRNA hsa-miR-544 TMEM49 miRanda miRanda
14034 chr17 57917281 57917281 1 + A G rs200069029 57917289 + 57917269 57917309 41 ATAAGTAGAGAAAGTTTTAAACTGCAGAAATTGGAGTGGAT ATAAGTAGAGAAGGTTTTAAACTGCAGAAATTGGAGTGGAT < 41bp 1 0.401993239576595 1 0.914113879203796 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 VMP1 ENSG00000062716 UTR3 Human protein_coding chr17:57917289 chr17:57917281 . . 0 hm6A_associated_SNPs_18622 0 0 1 1 57917277 57917298 mRNA hsa-miR-544 TMEM49 miRanda miRanda
14034 chr17 57917342 57917342 1 + C T rs112911537 57917333 + 57917313 57917353 41 TTCTGCCTTAAATTGGGAGGACTCCAAGCCGGGAAGGAAAA TTCTGCCTTAAATTGGGAGGACTCCAAGCTGGGAAGGAAAA < 41bp 1 0.44892188687702 1 0.847623944282532 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 VMP1 ENSG00000062716 UTR3 Human protein_coding chr17:57917333 chr17:57917342 . . 0 hm6A_associated_SNPs_18623 0 0 1 1 57917339 57917362 mRNA hsa-miR-186 TMEM49 miRanda miRanda
14034 chr17 58024324 58024324 1 + A G rs1051424 58024331 + 58024311 58024351 41 AATCAATGGTGCAAAAAAAAACTTAAAGCAAAATAGTATTG AATCAATGGTGCAGAAAAAAACTTAAAGCAAAATAGTATTG < 41bp 1 0.780709104891995 1 0.970009565353394 experiment 0.43858179021601 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 14 RPS6KB1 ENSG00000108443 UTR3 Human protein_coding chr17:58024331 chr17:58024324 . . 0 hm6A_associated_SNPs_18624 0 1 1 1 58024308 58024328 mRNA hsa-miR-129-5p RPS6KB1 miRanda miRanda
14034 chr17 58740978 58740978 1 + C T rs114421707 58740987 + 58740967 58741007 41 AAATTTGGTGCCGATGTTGAACTTTTTTTAAGGGGAGAAAA AAATTTGGTGCTGATGTTGAACTTTTTTTAAGGGGAGAAAA < 41bp 1 0.747637770241076 1 0.994272589683533 experiment 0.504724459517847 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 PPM1D ENSG00000170836 UTR3 Human protein_coding chr17:58740987 chr17:58740978 . . 0 hm6A_associated_SNPs_18627 0 0 1 3 58740956 58740979 mRNA hsa-miR-29a PPM1D miRanda miRanda
14034 chr17 58740978 58740978 1 + C T rs114421707 58740987 + 58740967 58741007 41 AAATTTGGTGCCGATGTTGAACTTTTTTTAAGGGGAGAAAA AAATTTGGTGCTGATGTTGAACTTTTTTTAAGGGGAGAAAA < 41bp 1 0.747637770241076 1 0.994272589683533 experiment 0.504724459517847 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 PPM1D ENSG00000170836 UTR3 Human protein_coding chr17:58740987 chr17:58740978 . . 0 hm6A_associated_SNPs_18627 0 0 1 3 58740955 58740979 mRNA hsa-miR-29b PPM1D miRanda miRanda
14034 chr17 58740978 58740978 1 + C T rs114421707 58740987 + 58740967 58741007 41 AAATTTGGTGCCGATGTTGAACTTTTTTTAAGGGGAGAAAA AAATTTGGTGCTGATGTTGAACTTTTTTTAAGGGGAGAAAA < 41bp 1 0.747637770241076 1 0.994272589683533 experiment 0.504724459517847 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 PPM1D ENSG00000170836 UTR3 Human protein_coding chr17:58740987 chr17:58740978 . . 0 hm6A_associated_SNPs_18627 0 0 1 3 58740956 58740979 mRNA hsa-miR-29c PPM1D miRanda miRanda
14034 chr17 58741035 58741035 1 + T C rs112343838 58741029 + 58741009 58741049 41 TAAAAGAAATATACAGTTTGACTTTTTGGAATTCAGCAGTT TAAAAGAAATATACAGTTTGACTTTTCGGAATTCAGCAGTT < 41bp 1 0.692384324306848 1 0.975122451782227 experiment 0.615231351386304 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 27 PPM1D ENSG00000170836 UTR3 Human protein_coding chr17:58741029 chr17:58741035 . . 0 hm6A_associated_SNPs_18628 0 0 1 1 58741028 58741049 mRNA hsa-miR-370 PPM1D miRanda miRanda
14034 chr17 59469360 59469360 1 + C G rs372166016 59469374 + 59469354 59469394 41 AAGCATCGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCG AAGCATGGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCG < 41bp 1 0.707597370336984 1 0.975601673126221 experiment 0.584805259326031 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 7 BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59469374 chr17:59469360 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_18631 0 0 0 1 59469352 59469374 mRNA hsa-miR-361-5p BCAS3 miRanda miRanda
14034 chr17 61503104 61503104 1 + C T rs186691432 61503107 + 61503087 61503127 41 GTGCCAGTTGTGCAAGACGAACTCTTTGAACACTACATGCT GTGCCAGTTGTGCAAGATGAACTCTTTGAACACTACATGCT < 41bp 1 0.788550180192497 1 0.955985963344574 experiment 0.422899639615007 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 TANC2 ENSG00000263644 ncRNA_intronic Human antisense chr17:61503107 chr17:61503104 . . 0 hm6A_associated_SNPs_18638 0 0 1 1 61503101 61503123 mRNA hsa-miR-142-3p TANC2 miRanda miRanda
14034 chr17 61503104 61503104 1 + C T rs186691432 61503116 + 61503096 61503136 41 GTGCAAGACGAACTCTTTGAACACTACATGCTTTGGACTTC GTGCAAGATGAACTCTTTGAACACTACATGCTTTGGACTTC < 41bp 1 0.739681357947354 1 0.92054295539856 experiment 0.520637284105291 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 9 TANC2 ENSG00000263644 ncRNA_intronic Human antisense chr17:61503116 chr17:61503104 . . 0 hm6A_associated_SNPs_18639 0 0 1 1 61503101 61503123 mRNA hsa-miR-142-3p TANC2 miRanda miRanda
14034 chr17 61504757 61504757 1 + A G rs116008435 61504744 + 61504724 61504764 41 CTATGACTCAGATGTAAAGGACTTTCTCTGTACAGTATATT CTATGACTCAGATGTAAAGGACTTTCTCTGTACGGTATATT < 41bp 1 0.291289100212845 1 0.903469979763031 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 TANC2 ENSG00000263644 ncRNA_intronic Human antisense chr17:61504744 chr17:61504757 . . 0 hm6A_associated_SNPs_18643 0 0 1 2 61504754 61504775 mRNA hsa-miR-33a TANC2 miRanda miRanda
14034 chr17 61504757 61504757 1 + A G rs116008435 61504744 + 61504724 61504764 41 CTATGACTCAGATGTAAAGGACTTTCTCTGTACAGTATATT CTATGACTCAGATGTAAAGGACTTTCTCTGTACGGTATATT < 41bp 1 0.291289100212845 1 0.903469979763031 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 TANC2 ENSG00000263644 ncRNA_intronic Human antisense chr17:61504744 chr17:61504757 . . 0 hm6A_associated_SNPs_18643 0 0 1 2 61504755 61504775 mRNA hsa-miR-33b TANC2 miRanda miRanda
14034 chr17 61685705 61685705 1 + C T rs116289277 61685688 + 61685668 61685708 41 TGAGGCGCTCTGTACTAGAAACTGCTCTTAATAATAACGGT TGAGGCGCTCTGTACTAGAAACTGCTCTTAATAATAATGGT < 41bp 1 0.45768230997056 1 0.521080553531647 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 TACO1 ENSG00000136463 UTR3 Human protein_coding chr17:61685688 chr17:61685705 . . 0 hm6A_associated_SNPs_18653 0 0 1 1 61685690 61685710 mRNA hsa-miR-451 TACO1 miRanda miRanda
14034 chr17 61896455 61896455 1 + A G rs1062790 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAGACCCAACAACAGCT < 41bp 1 0.343080906052075 1 0.365455210208893 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896455 . . 0 hm6A_associated_SNPs_18659 0 0 1 4 61896450 61896472 mRNA hsa-miR-320a DDX42 miRanda miRanda
14034 chr17 61896455 61896455 1 + A G rs1062790 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAGACCCAACAACAGCT < 41bp 1 0.343080906052075 1 0.365455210208893 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896455 . . 0 hm6A_associated_SNPs_18659 0 0 1 4 61896450 61896472 mRNA hsa-miR-320b DDX42 miRanda miRanda
14034 chr17 61896455 61896455 1 + A G rs1062790 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAGACCCAACAACAGCT < 41bp 1 0.343080906052075 1 0.365455210208893 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896455 . . 0 hm6A_associated_SNPs_18659 0 0 1 4 61896452 61896472 mRNA hsa-miR-320c DDX42 miRanda miRanda
14034 chr17 61896455 61896455 1 + A G rs1062790 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAGACCCAACAACAGCT < 41bp 1 0.343080906052075 1 0.365455210208893 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896455 . . 0 hm6A_associated_SNPs_18659 0 0 1 4 61896453 61896472 mRNA hsa-miR-320d DDX42 miRanda miRanda
14034 chr17 61896461 61896461 1 + A G rs181077540 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAAACCCAGCAACAGCT < 41bp 1 0.365211217982174 1 0.363666862249374 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896461 . . 0 hm6A_associated_SNPs_18660 0 0 1 5 61896458 61896485 mRNA hsa-miR-7 DDX42 miRanda miRanda
14034 chr17 61896461 61896461 1 + A G rs181077540 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAAACCCAGCAACAGCT < 41bp 1 0.365211217982174 1 0.363666862249374 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896461 . . 0 hm6A_associated_SNPs_18660 0 0 1 5 61896450 61896472 mRNA hsa-miR-320a DDX42 miRanda miRanda
14034 chr17 61896461 61896461 1 + A G rs181077540 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAAACCCAGCAACAGCT < 41bp 1 0.365211217982174 1 0.363666862249374 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896461 . . 0 hm6A_associated_SNPs_18660 0 0 1 5 61896450 61896472 mRNA hsa-miR-320b DDX42 miRanda miRanda
14034 chr17 61896461 61896461 1 + A G rs181077540 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAAACCCAGCAACAGCT < 41bp 1 0.365211217982174 1 0.363666862249374 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896461 . . 0 hm6A_associated_SNPs_18660 0 0 1 5 61896452 61896472 mRNA hsa-miR-320c DDX42 miRanda miRanda
14034 chr17 61896461 61896461 1 + A G rs181077540 61896449 + 61896429 61896469 41 ATTGCTAAATTTAAAATTAAACAAGAAACCCAACAACAGCT ATTGCTAAATTTAAAATTAAACAAGAAACCCAGCAACAGCT < 41bp 1 0.365211217982174 1 0.363666862249374 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896449 chr17:61896461 . . 0 hm6A_associated_SNPs_18660 0 0 1 5 61896453 61896472 mRNA hsa-miR-320d DDX42 miRanda miRanda
14034 chr17 61896606 61896606 1 + G A rs148829876 61896598 + 61896578 61896618 41 AAAGAAATATACAAACTTTGACTTTTGTGACTTTGTGAAGG AAAGAAATATACAAACTTTGACTTTTGTAACTTTGTGAAGG < 41bp 1 0.299010495297788 1 0.604404807090759 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896598 chr17:61896606 . . 0 hm6A_associated_SNPs_18661 0 0 1 3 61896595 61896619 mRNA hsa-miR-205 DDX42 miRanda miRanda
14034 chr17 61896606 61896606 1 + G A rs148829876 61896598 + 61896578 61896618 41 AAAGAAATATACAAACTTTGACTTTTGTGACTTTGTGAAGG AAAGAAATATACAAACTTTGACTTTTGTAACTTTGTGAAGG < 41bp 1 0.299010495297788 1 0.604404807090759 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896598 chr17:61896606 . . 0 hm6A_associated_SNPs_18661 0 0 1 3 61896592 61896611 mRNA hsa-miR-224 DDX42 miRanda miRanda
14034 chr17 61896606 61896606 1 + G A rs148829876 61896598 + 61896578 61896618 41 AAAGAAATATACAAACTTTGACTTTTGTGACTTTGTGAAGG AAAGAAATATACAAACTTTGACTTTTGTAACTTTGTGAAGG < 41bp 1 0.299010495297788 1 0.604404807090759 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896598 chr17:61896606 . . 0 hm6A_associated_SNPs_18661 0 0 1 3 61896605 61896626 mRNA hsa-miR-186 DDX42 miRanda miRanda
14034 chr17 61896606 61896606 1 + G A rs148829876 61896607 + 61896587 61896627 41 TACAAACTTTGACTTTTGTGACTTTGTGAAGGTTTCTTTAA TACAAACTTTGACTTTTGTAACTTTGTGAAGGTTTCTTTAA < 41bp 1 0.289681405045743 1 0.217456370592117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896607 chr17:61896606 . . 0 hm6A_associated_SNPs_18662 0 0 1 3 61896595 61896619 mRNA hsa-miR-205 DDX42 miRanda miRanda
14034 chr17 61896606 61896606 1 + G A rs148829876 61896607 + 61896587 61896627 41 TACAAACTTTGACTTTTGTGACTTTGTGAAGGTTTCTTTAA TACAAACTTTGACTTTTGTAACTTTGTGAAGGTTTCTTTAA < 41bp 1 0.289681405045743 1 0.217456370592117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896607 chr17:61896606 . . 0 hm6A_associated_SNPs_18662 0 0 1 3 61896592 61896611 mRNA hsa-miR-224 DDX42 miRanda miRanda
14034 chr17 61896606 61896606 1 + G A rs148829876 61896607 + 61896587 61896627 41 TACAAACTTTGACTTTTGTGACTTTGTGAAGGTTTCTTTAA TACAAACTTTGACTTTTGTAACTTTGTGAAGGTTTCTTTAA < 41bp 1 0.289681405045743 1 0.217456370592117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 DDX42 ENSG00000198231 UTR3 Human protein_coding chr17:61896607 chr17:61896606 . . 0 hm6A_associated_SNPs_18662 0 0 1 3 61896605 61896626 mRNA hsa-miR-186 DDX42 miRanda miRanda
14034 chr17 62223446 62223446 1 + G A rs370213406 62223452 + 62223432 62223472 41 GGGGCCGGCCTGCTGTGATGACATTCCAATTAAAGCACGTG GGGGCCGGCCTGCTATGATGACATTCCAATTAAAGCACGTG < 41bp 1 0.649997899519099 1 0.81554514169693 experiment 0.700004200961802 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 15 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223452 chr17:62223446 . . 0 hm6A_associated_SNPs_18663 0 0 1 4 62223438 62223447 mRNA hsa-miR-214 SNORD104 miRanda miRanda
14034 chr17 62223446 62223446 1 + G A rs370213406 62223452 + 62223432 62223472 41 GGGGCCGGCCTGCTGTGATGACATTCCAATTAAAGCACGTG GGGGCCGGCCTGCTATGATGACATTCCAATTAAAGCACGTG < 41bp 1 0.649997899519099 1 0.81554514169693 experiment 0.700004200961802 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 15 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223452 chr17:62223446 . . 0 hm6A_associated_SNPs_18663 0 0 1 4 62223438 62223459 mRNA hsa-miR-1 SNORD104 miRanda miRanda
14034 chr17 62223446 62223446 1 + G A rs370213406 62223452 + 62223432 62223472 41 GGGGCCGGCCTGCTGTGATGACATTCCAATTAAAGCACGTG GGGGCCGGCCTGCTATGATGACATTCCAATTAAAGCACGTG < 41bp 1 0.649997899519099 1 0.81554514169693 experiment 0.700004200961802 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 15 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223452 chr17:62223446 . . 0 hm6A_associated_SNPs_18663 0 0 1 4 62223438 62223459 mRNA hsa-miR-206 SNORD104 miRanda miRanda
14034 chr17 62223446 62223446 1 + G A rs370213406 62223452 + 62223432 62223472 41 GGGGCCGGCCTGCTGTGATGACATTCCAATTAAAGCACGTG GGGGCCGGCCTGCTATGATGACATTCCAATTAAAGCACGTG < 41bp 1 0.649997899519099 1 0.81554514169693 experiment 0.700004200961802 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 15 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223452 chr17:62223446 . . 0 hm6A_associated_SNPs_18663 0 0 1 4 62223440 62223459 mRNA hsa-miR-613 SNORD104 miRanda miRanda
14034 chr17 66042766 66042766 1 + A C rs1802811 66042784 + 66042764 66042804 41 TTATTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT TTCTTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT < 41bp 1 0.523217117266459 1 0.914140939712524 experiment 0.953565765467083 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 3 KPNA2 ENSG00000182481 UTR3 Human protein_coding chr17:66042784 chr17:66042766 . . 0 hm6A_associated_SNPs_18680 0 0 1 6 66042745 66042767 mRNA hsa-miR-208a KPNA2 miRanda miRanda
14034 chr17 66042766 66042766 1 + A C rs1802811 66042784 + 66042764 66042804 41 TTATTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT TTCTTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT < 41bp 1 0.523217117266459 1 0.914140939712524 experiment 0.953565765467083 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 3 KPNA2 ENSG00000182481 UTR3 Human protein_coding chr17:66042784 chr17:66042766 . . 0 hm6A_associated_SNPs_18680 0 0 1 6 66042751 66042774 mRNA hsa-miR-494 KPNA2 miRanda miRanda
14034 chr17 66042766 66042766 1 + A C rs1802811 66042784 + 66042764 66042804 41 TTATTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT TTCTTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT < 41bp 1 0.523217117266459 1 0.914140939712524 experiment 0.953565765467083 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 3 KPNA2 ENSG00000182481 UTR3 Human protein_coding chr17:66042784 chr17:66042766 . . 0 hm6A_associated_SNPs_18680 0 0 1 6 66042747 66042767 mRNA hsa-miR-499-5p KPNA2 miRanda miRanda
14034 chr17 66042766 66042766 1 + A C rs1802811 66042784 + 66042764 66042804 41 TTATTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT TTCTTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT < 41bp 1 0.523217117266459 1 0.914140939712524 experiment 0.953565765467083 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 3 KPNA2 ENSG00000182481 UTR3 Human protein_coding chr17:66042784 chr17:66042766 . . 0 hm6A_associated_SNPs_18680 0 0 1 6 66042755 66042776 mRNA hsa-miR-539 KPNA2 miRanda miRanda
14034 chr17 66042766 66042766 1 + A C rs1802811 66042784 + 66042764 66042804 41 TTATTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT TTCTTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT < 41bp 1 0.523217117266459 1 0.914140939712524 experiment 0.953565765467083 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 3 KPNA2 ENSG00000182481 UTR3 Human protein_coding chr17:66042784 chr17:66042766 . . 0 hm6A_associated_SNPs_18680 0 0 1 6 66042760 66042780 mRNA hsa-miR-411 KPNA2 miRanda miRanda
14034 chr17 66042766 66042766 1 + A C rs1802811 66042784 + 66042764 66042804 41 TTATTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT TTCTTGTTTCTCTACTAAGAACTCTTTCTTAAATGTGGTTT < 41bp 1 0.523217117266459 1 0.914140939712524 experiment 0.953565765467083 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 3 KPNA2 ENSG00000182481 UTR3 Human protein_coding chr17:66042784 chr17:66042766 . . 0 hm6A_associated_SNPs_18680 0 0 1 6 66042743 66042767 mRNA hsa-miR-208b KPNA2 miRanda miRanda
14034 chr17 66125024 66125024 1 + T C rs112382081 66125021 + 66125001 66125041 41 GCCCCATTAAAGAAGAAGTGACATGGAAAAAACACTGTGCC GCCCCATTAAAGAAGAAGTGACACGGAAAAAACACTGTGCC < 41bp 1 0.1960050613781 1 0.182440102100372 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66125021 chr17:66125024 . . 0 hm6A_associated_SNPs_18684 0 0 1 3 66125020 66125040 lncRNA hsa-miR-128-3p AC005332.7 miRanda starBase2
14034 chr17 66125024 66125024 1 + T C rs112382081 66125021 + 66125001 66125041 41 GCCCCATTAAAGAAGAAGTGACATGGAAAAAACACTGTGCC GCCCCATTAAAGAAGAAGTGACACGGAAAAAACACTGTGCC < 41bp 1 0.1960050613781 1 0.182440102100372 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66125021 chr17:66125024 . . 0 hm6A_associated_SNPs_18684 0 0 1 3 66125019 66125040 lncRNA hsa-miR-216a-3p AC005332.7 miRanda starBase2
14034 chr17 66125024 66125024 1 + T C rs112382081 66125021 + 66125001 66125041 41 GCCCCATTAAAGAAGAAGTGACATGGAAAAAACACTGTGCC GCCCCATTAAAGAAGAAGTGACACGGAAAAAACACTGTGCC < 41bp 1 0.1960050613781 1 0.182440102100372 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66125021 chr17:66125024 . . 0 hm6A_associated_SNPs_18684 0 0 1 3 66125019 66125040 lncRNA hsa-miR-3681-3p AC005332.7 miRanda starBase2
14034 chr17 66125507 66125507 1 + A G rs62085702 66125504 + 66125484 66125524 41 TCGTCCGTAAAAGGAGATTAACAATGCTTTTCTGCCCACCT TCGTCCGTAAAAGGAGATTAACAGTGCTTTTCTGCCCACCT < 41bp 1 0.095391263480321 1 0.0511870980262756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66125504 chr17:66125507 . . 0 hm6A_associated_SNPs_18687 0 0 0 2 66125503 66125524 lncRNA hsa-miR-541-3p AC005332.7 miRanda starBase2
14034 chr17 66125507 66125507 1 + A G rs62085702 66125504 + 66125484 66125524 41 TCGTCCGTAAAAGGAGATTAACAATGCTTTTCTGCCCACCT TCGTCCGTAAAAGGAGATTAACAGTGCTTTTCTGCCCACCT < 41bp 1 0.095391263480321 1 0.0511870980262756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66125504 chr17:66125507 . . 0 hm6A_associated_SNPs_18687 0 0 0 2 66125502 66125524 lncRNA hsa-miR-654-5p AC005332.7 miRanda starBase2
14034 chr17 66125508 66125508 1 + T A rs11547173 66125504 + 66125484 66125524 41 TCGTCCGTAAAAGGAGATTAACAATGCTTTTCTGCCCACCT TCGTCCGTAAAAGGAGATTAACAAAGCTTTTCTGCCCACCT < 41bp 1 0.106399196449749 1 0.057173877954483 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66125504 chr17:66125508 . . 0 hm6A_associated_SNPs_18688 0 0 0 2 66125503 66125524 lncRNA hsa-miR-541-3p AC005332.7 miRanda starBase2
14034 chr17 66125508 66125508 1 + T A rs11547173 66125504 + 66125484 66125524 41 TCGTCCGTAAAAGGAGATTAACAATGCTTTTCTGCCCACCT TCGTCCGTAAAAGGAGATTAACAAAGCTTTTCTGCCCACCT < 41bp 1 0.106399196449749 1 0.057173877954483 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66125504 chr17:66125508 . . 0 hm6A_associated_SNPs_18688 0 0 0 2 66125502 66125524 lncRNA hsa-miR-654-5p AC005332.7 miRanda starBase2
14034 chr17 71204053 71204053 1 - A T rs79914967 71204036 - 71204016 71204056 41 CTTTTAAAGCCAGATACTTGACAAGGATTTTAGATCTTAAT CTTATAAAGCCAGATACTTGACAAGGATTTTAGATCTTAAT < 41bp 1 0.67318354107639 1 0.834952116012573 experiment 0.65363291784722 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 4 FAM104A ENSG00000133193;ENSG00000166685 UTR3 Human other chr17:71204036 chr17:71204053 . . 0 hm6A_associated_SNPs_18711 0 0 1 2 71204035 71204055 mRNA hsa-miR-26a FAM104A miRanda miRanda
14034 chr17 71204053 71204053 1 - A T rs79914967 71204036 - 71204016 71204056 41 CTTTTAAAGCCAGATACTTGACAAGGATTTTAGATCTTAAT CTTATAAAGCCAGATACTTGACAAGGATTTTAGATCTTAAT < 41bp 1 0.67318354107639 1 0.834952116012573 experiment 0.65363291784722 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 4 FAM104A ENSG00000133193;ENSG00000166685 UTR3 Human other chr17:71204036 chr17:71204053 . . 0 hm6A_associated_SNPs_18711 0 0 1 2 71204035 71204053 mRNA hsa-miR-26b FAM104A miRanda miRanda
14034 chr17 71204053 71204053 1 - A T rs79914967 71204071 - 71204051 71204091 41 AGAGCTTTTTTTTTTTTTAAACTACCATCTCCCAACTTTTA AGAGCTTTTTTTTTTTTTAAACTACCATCTCCCAACTTATA < 41bp 1 0.341671212597604 1 0.847850739955902 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM104A ENSG00000133193;ENSG00000166685 UTR3 Human other chr17:71204071 chr17:71204053 . . 0 hm6A_associated_SNPs_18712 0 0 1 2 71204035 71204055 mRNA hsa-miR-26a FAM104A miRanda miRanda
14034 chr17 71204053 71204053 1 - A T rs79914967 71204071 - 71204051 71204091 41 AGAGCTTTTTTTTTTTTTAAACTACCATCTCCCAACTTTTA AGAGCTTTTTTTTTTTTTAAACTACCATCTCCCAACTTATA < 41bp 1 0.341671212597604 1 0.847850739955902 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 FAM104A ENSG00000133193;ENSG00000166685 UTR3 Human other chr17:71204071 chr17:71204053 . . 0 hm6A_associated_SNPs_18712 0 0 1 2 71204035 71204053 mRNA hsa-miR-26b FAM104A miRanda miRanda
14034 chr17 73060111 73060111 1 + G A rs12602540 73060123 + 73060103 73060143 41 ACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTG ACTCTCTTAGAAATGCCTTGACTGAATGTGCAATATTTGTG < 41bp 1 0.729189248477748 1 0.265864819288254 experiment 0.541621503044504 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 KCTD2 ENSG00000180901 UTR3 Human protein_coding chr17:73060123 chr17:73060111 . . 0 hm6A_associated_SNPs_18736 0 0 1 4 73060110 73060132 mRNA hsa-miR-181a KCTD2 miRanda miRanda
14034 chr17 73060111 73060111 1 + G A rs12602540 73060123 + 73060103 73060143 41 ACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTG ACTCTCTTAGAAATGCCTTGACTGAATGTGCAATATTTGTG < 41bp 1 0.729189248477748 1 0.265864819288254 experiment 0.541621503044504 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 KCTD2 ENSG00000180901 UTR3 Human protein_coding chr17:73060123 chr17:73060111 . . 0 hm6A_associated_SNPs_18736 0 0 1 4 73060110 73060132 mRNA hsa-miR-181b KCTD2 miRanda miRanda
14034 chr17 73060111 73060111 1 + G A rs12602540 73060123 + 73060103 73060143 41 ACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTG ACTCTCTTAGAAATGCCTTGACTGAATGTGCAATATTTGTG < 41bp 1 0.729189248477748 1 0.265864819288254 experiment 0.541621503044504 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 KCTD2 ENSG00000180901 UTR3 Human protein_coding chr17:73060123 chr17:73060111 . . 0 hm6A_associated_SNPs_18736 0 0 1 4 73060111 73060132 mRNA hsa-miR-181c KCTD2 miRanda miRanda
14034 chr17 73060111 73060111 1 + G A rs12602540 73060123 + 73060103 73060143 41 ACTCTCTTGGAAATGCCTTGACTGAATGTGCAATATTTGTG ACTCTCTTAGAAATGCCTTGACTGAATGTGCAATATTTGTG < 41bp 1 0.729189248477748 1 0.265864819288254 experiment 0.541621503044504 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 KCTD2 ENSG00000180901 UTR3 Human protein_coding chr17:73060123 chr17:73060111 . . 0 hm6A_associated_SNPs_18736 0 0 1 4 73060110 73060132 mRNA hsa-miR-181d KCTD2 miRanda miRanda
14034 chr17 73125809 73125809 1 + G A rs117950150 73125793 + 73125773 73125813 41 CCTTGAGTGACAGCCCAGGGACTTAATGTGGCCATCGGGCA CCTTGAGTGACAGCCCAGGGACTTAATGTGGCCATCAGGCA < 41bp 1 0.49980835347508 1 0.967270195484161 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 37 ARMC7 ENSG00000125449 UTR3 Human protein_coding chr17:73125793 chr17:73125809 . . 0 hm6A_associated_SNPs_18750 0 0 1 1 73125803 73125823 mRNA hsa-miR-218 ARMC7 miRanda miRanda
14034 chr17 73269095 73269095 1 - A C rs73356384 73269092 - 73269072 73269112 41 TTTTCCAACCTATTTAATAGACATTAAAGCTAAACACACAT TTTTCCAACCTATTTAAGAGACATTAAAGCTAAACACACAT < 41bp 1 0.451705112323489 1 0.840097188949585 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 LOC100287042 ENSG00000263843 ncRNA_exonic Human antisense chr17:73269092 chr17:73269095 . . 0 hm6A_associated_SNPs_18762 1 0 1 1 73269086 73269107 mRNA hsa-miR-155 SLC25A19 miRanda miRanda
14034 chr17 73269258 73269258 1 - G C rs7198 73269249 - 73269229 73269269 41 CAGCCCACACTCCAAAGGAAACAGACGCCATCCTACACCTA CAGCCCACACTGCAAAGGAAACAGACGCCATCCTACACCTA < 41bp 1 0.679983499940406 1 0.832801342010498 experiment 0.640033000119187 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 LOC100287042 ENSG00000263843 ncRNA_exonic Human antisense chr17:73269249 chr17:73269258 . . 0 hm6A_associated_SNPs_18763 1 0 1 1 73269256 73269276 mRNA hsa-miR-122 SLC25A19 miRanda miRanda
14034 chr17 73269258 73269258 1 - G C rs7198 73269271 - 73269251 73269291 41 AAGTTGCTGTTTCTCCTCTGACCAGCCCACACTCCAAAGGA AAGTTGCTGTTTCTCCTCTGACCAGCCCACACTGCAAAGGA < 41bp 1 0.528219344072309 1 0.81476092338562 experiment 0.943561311855381 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 LOC100287042 ENSG00000263843 ncRNA_exonic Human antisense chr17:73269271 chr17:73269258 . . 0 hm6A_associated_SNPs_18764 1 0 1 1 73269256 73269276 mRNA hsa-miR-122 SLC25A19 miRanda miRanda
14034 chr17 73495654 73495654 1 + A G rs186576900 73495652 + 73495632 73495672 41 TTCCCTGGGCCTCACCAGGGACACTCTTGAATGTATGGCCT TTCCCTGGGCCTCACCAGGGACGCTCTTGAATGTATGGCCT Direct Loss 1 0.606130172418866 1 0.967459559440613 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|30867593;GSE121942;miCLIP;HepG2;Control 23 TMEM94 ENSG00000177728 UTR3 Human protein_coding chr17:73495652 chr17:73495654 . . 0 hm6A_associated_SNPs_18768 0 0 1 4 73495641 73495666 mRNA hsa-miR-181a KIAA0195 miRanda miRanda
14034 chr17 73495654 73495654 1 + A G rs186576900 73495652 + 73495632 73495672 41 TTCCCTGGGCCTCACCAGGGACACTCTTGAATGTATGGCCT TTCCCTGGGCCTCACCAGGGACGCTCTTGAATGTATGGCCT Direct Loss 1 0.606130172418866 1 0.967459559440613 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|30867593;GSE121942;miCLIP;HepG2;Control 23 TMEM94 ENSG00000177728 UTR3 Human protein_coding chr17:73495652 chr17:73495654 . . 0 hm6A_associated_SNPs_18768 0 0 1 4 73495644 73495666 mRNA hsa-miR-181b KIAA0195 miRanda miRanda
14034 chr17 73495654 73495654 1 + A G rs186576900 73495652 + 73495632 73495672 41 TTCCCTGGGCCTCACCAGGGACACTCTTGAATGTATGGCCT TTCCCTGGGCCTCACCAGGGACGCTCTTGAATGTATGGCCT Direct Loss 1 0.606130172418866 1 0.967459559440613 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|30867593;GSE121942;miCLIP;HepG2;Control 23 TMEM94 ENSG00000177728 UTR3 Human protein_coding chr17:73495652 chr17:73495654 . . 0 hm6A_associated_SNPs_18768 0 0 1 4 73495641 73495666 mRNA hsa-miR-181c KIAA0195 miRanda miRanda
14034 chr17 73495654 73495654 1 + A G rs186576900 73495652 + 73495632 73495672 41 TTCCCTGGGCCTCACCAGGGACACTCTTGAATGTATGGCCT TTCCCTGGGCCTCACCAGGGACGCTCTTGAATGTATGGCCT Direct Loss 1 0.606130172418866 1 0.967459559440613 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|30867593;GSE121942;miCLIP;HepG2;Control 23 TMEM94 ENSG00000177728 UTR3 Human protein_coding chr17:73495652 chr17:73495654 . . 0 hm6A_associated_SNPs_18768 0 0 1 4 73495644 73495666 mRNA hsa-miR-181d KIAA0195 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-302a TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-302b TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-302c TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-302d TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-372 TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-373 TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517527 73517547 mRNA hsa-miR-520e TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-520a-3p TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517527 73517547 mRNA hsa-miR-520b TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-520c-3p TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517526 73517547 mRNA hsa-miR-520d-3p TSEN54 miRanda miRanda
14034 chr17 73517536 73517536 1 + G A rs79508780 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCATGCAGC < 41bp 1 0.372956190077043 1 0.258073598146439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517536 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_18770 2 0 1 12 73517532 73517547 mRNA hsa-miR-302e TSEN54 miRanda miRanda
14034 chr17 73520662 73520662 1 + T C rs111972085 73520650 + 73520630 73520670 41 TCTGATACTCACAGAGTGAAACTGTGACCCTCTCCCTTCCC TCTGATACTCACAGAGTGAAACTGTGACCCTCCCCCTTCCC < 41bp 1 0.714402314723613 1 0.924390196800232 experiment 0.571195370552773 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 UTR3 Human protein_coding chr17:73520650 chr17:73520662 . . 0 hm6A_associated_SNPs_18771 1 0 1 1 73520654 73520676 mRNA hsa-miR-214 TSEN54 miRanda miRanda
14034 chr17 73520662 73520662 1 + T C rs111972085 73520656 + 73520636 73520676 41 ACTCACAGAGTGAAACTGTGACCCTCTCCCTTCCCTGCTGC ACTCACAGAGTGAAACTGTGACCCTCCCCCTTCCCTGCTGC < 41bp 1 0.512647002922875 1 0.896118760108948 experiment 0.974705994154251 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 TSEN54 ENSG00000182173 UTR3 Human protein_coding chr17:73520656 chr17:73520662 . . 0 hm6A_associated_SNPs_18772 1 0 1 1 73520654 73520676 mRNA hsa-miR-214 TSEN54 miRanda miRanda
14034 chr17 73820700 73820700 1 + G C rs532179650 73820691 + 73820671 73820711 41 AGGTATGCGTGGTGGTGTGGACAGTGTCTGTGTGTATATCT AGGTATGCGTGGTGGTGTGGACAGTGTCTCTGTGTATATCT < 41bp 1 0.6612559075852 1 0.757144451141357 experiment 0.6774881848296 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 UNK ENSG00000132478 UTR3 Human protein_coding chr17:73820691 chr17:73820700 . . 0 hm6A_associated_SNPs_18785 0 0 1 1 73820689 73820710 mRNA hsa-miR-410 UNK miRanda miRanda
14034 chr17 74946138 74946138 1 + C T rs113993912 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCTTTCAGAACACTGCCACCCACCCAGTTT < 41bp 1 0.706286462104899 1 0.740601658821106 experiment 0.587427075790202 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946138 . . 0 hm6A_associated_SNPs_18820 0 0 0 4 74946128 74946153 mRNA hsa-miR-34a MGAT5B miRanda miRanda
14034 chr17 74946138 74946138 1 + C T rs113993912 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCTTTCAGAACACTGCCACCCACCCAGTTT < 41bp 1 0.706286462104899 1 0.740601658821106 experiment 0.587427075790202 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946138 . . 0 hm6A_associated_SNPs_18820 0 0 0 4 74946128 74946153 mRNA hsa-miR-34c-5p MGAT5B miRanda miRanda
14034 chr17 74946138 74946138 1 + C T rs113993912 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCTTTCAGAACACTGCCACCCACCCAGTTT < 41bp 1 0.706286462104899 1 0.740601658821106 experiment 0.587427075790202 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946138 . . 0 hm6A_associated_SNPs_18820 0 0 0 4 74946132 74946153 mRNA hsa-miR-449a MGAT5B miRanda miRanda
14034 chr17 74946138 74946138 1 + C T rs113993912 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCTTTCAGAACACTGCCACCCACCCAGTTT < 41bp 1 0.706286462104899 1 0.740601658821106 experiment 0.587427075790202 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946138 . . 0 hm6A_associated_SNPs_18820 0 0 0 4 74946132 74946153 mRNA hsa-miR-449b MGAT5B miRanda miRanda
14034 chr17 74946147 74946147 1 + A G rs372606181 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCCTTCAGAACGCTGCCACCCACCCAGTTT Direct Loss 1 0.623768325289148 1 0.739840626716614 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946147 . . 0 hm6A_associated_SNPs_18821 0 0 0 4 74946128 74946153 mRNA hsa-miR-34a MGAT5B miRanda miRanda
14034 chr17 74946147 74946147 1 + A G rs372606181 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCCTTCAGAACGCTGCCACCCACCCAGTTT Direct Loss 1 0.623768325289148 1 0.739840626716614 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946147 . . 0 hm6A_associated_SNPs_18821 0 0 0 4 74946128 74946153 mRNA hsa-miR-34c-5p MGAT5B miRanda miRanda
14034 chr17 74946147 74946147 1 + A G rs372606181 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCCTTCAGAACGCTGCCACCCACCCAGTTT Direct Loss 1 0.623768325289148 1 0.739840626716614 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946147 . . 0 hm6A_associated_SNPs_18821 0 0 0 4 74946132 74946153 mRNA hsa-miR-449a MGAT5B miRanda miRanda
14034 chr17 74946147 74946147 1 + A G rs372606181 74946145 + 74946125 74946165 41 CAGCGGGTCAGGCCTTCAGAACACTGCCACCCACCCAGTTT CAGCGGGTCAGGCCTTCAGAACGCTGCCACCCACCCAGTTT Direct Loss 1 0.623768325289148 1 0.739840626716614 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MGAT5B ENSG00000167889 UTR3 Human protein_coding chr17:74946145 chr17:74946147 . . 0 hm6A_associated_SNPs_18821 0 0 0 4 74946132 74946153 mRNA hsa-miR-449b MGAT5B miRanda miRanda
14034 chr17 75496342 75496342 1 + T C rs448767 75496346 + 75496326 75496366 41 TCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTG TCACCACCCCCACTGGCGAGACAGTTTACTTTGCCAACTTG < 41bp 1 0.178308365696877 1 0.846152067184448 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75496346 chr17:75496342 . . 0 hm6A_associated_SNPs_18837 0 0 1 1 75496338 75496363 mRNA hsa-miR-182 SEPT9 miRanda miRanda
14034 chr17 75496361 75496361 1 + A G rs2627222 75496346 + 75496326 75496366 41 TCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTG TCACCACCCCCACTGGTGAGACAGTTTACTTTGCCGACTTG < 41bp 1 0.208342150646202 1 0.877072095870972 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75496346 chr17:75496361 . . 0 hm6A_associated_SNPs_18838 0 0 1 2 75496338 75496363 mRNA hsa-miR-182 SEPT9 miRanda miRanda
14034 chr17 75496361 75496361 1 + A G rs2627222 75496346 + 75496326 75496366 41 TCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTG TCACCACCCCCACTGGTGAGACAGTTTACTTTGCCGACTTG < 41bp 1 0.208342150646202 1 0.877072095870972 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75496346 chr17:75496361 . . 0 hm6A_associated_SNPs_18838 0 0 1 2 75496359 75496382 mRNA hsa-miR-182 SEPT9 miRanda miRanda
14034 chr17 75496636 75496636 1 + A G rs189204974 75496622 + 75496602 75496642 41 TTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAATGTATT TTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAGTGTATT < 41bp 1 0.310924461769558 1 0.203440129756927 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 35 SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75496622 chr17:75496636 . . 0 hm6A_associated_SNPs_18839 1 0 1 1 75496628 75496648 mRNA hsa-miR-873 SEPT9 miRanda miRanda
14034 chr17 75496640 75496640 1 + A G rs180847518 75496622 + 75496602 75496642 41 TTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAATGTATT TTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAATGTGTT < 41bp 1 0.33672011724894 1 0.214802354574203 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75496622 chr17:75496640 . . 0 hm6A_associated_SNPs_18840 1 0 1 2 75496637 75496661 mRNA hsa-miR-494 SEPT9 miRanda miRanda
14034 chr17 75496640 75496640 1 + A G rs180847518 75496622 + 75496602 75496642 41 TTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAATGTATT TTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAATGTGTT < 41bp 1 0.33672011724894 1 0.214802354574203 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75496622 chr17:75496640 . . 0 hm6A_associated_SNPs_18840 1 0 1 2 75496628 75496648 mRNA hsa-miR-873 SEPT9 miRanda miRanda
14034 chr17 78368366 78368366 1 + T C rs553536486 78368347 + 78368327 78368367 41 AATCTGCTTTGATACTTAGGACCTCTCTGGACTAATTTCTC AATCTGCTTTGATACTTAGGACCTCTCTGGACTAATTTCCC < 41bp 1 0.442449375745053 1 0.500090420246124 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 40 LOC100294362 ENSG00000263069 ncRNA_intronic Human antisense chr17:78368347 chr17:78368366 . . 0 hm6A_associated_SNPs_18929 0 0 1 1 78368346 78368368 mRNA hsa-miR-539 RNF213 miRanda miRanda
14034 chr17 78368366 78368366 1 + T C rs553536486 78368357 + 78368337 78368377 41 GATACTTAGGACCTCTCTGGACTAATTTCTCTTCCTAGACA GATACTTAGGACCTCTCTGGACTAATTTCCCTTCCTAGACA < 41bp 1 0.556899154168836 1 0.824000597000122 experiment 0.886201691662328 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 LOC100294362 ENSG00000263069 ncRNA_intronic Human antisense chr17:78368357 chr17:78368366 . . 0 hm6A_associated_SNPs_18930 0 0 1 1 78368346 78368368 mRNA hsa-miR-539 RNF213 miRanda miRanda
14034 chr17 78368366 78368366 1 + T C rs553536486 78368375 + 78368355 78368395 41 GGACTAATTTCTCTTCCTAGACAGCTCAGCACAGCTATTGA GGACTAATTTCCCTTCCTAGACAGCTCAGCACAGCTATTGA < 41bp 1 0.502626412774073 1 0.387853890657425 experiment 0.994747174451853 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 12 LOC100294362 ENSG00000263069 ncRNA_intronic Human antisense chr17:78368375 chr17:78368366 . . 0 hm6A_associated_SNPs_18931 0 0 1 1 78368346 78368368 mRNA hsa-miR-539 RNF213 miRanda miRanda
14034 chr17 78939857 78939857 1 + T C rs1062935 78939870 + 78939850 78939890 41 GCGTTTCTGTTTGTTTTGAGACAAAATCACCACCTGTCAAA GCGTTTCCGTTTGTTTTGAGACAAAATCACCACCTGTCAAA < 41bp 1 0.461566706697794 1 0.959891319274902 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 8 RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78939870 chr17:78939857 . . 0 hm6A_associated_SNPs_18949 0 0 1 1 78939845 78939865 mRNA hsa-miR-495 RPTOR miRanda miRanda
14034 chr17 78940111 78940111 1 + G A rs8074182 78940096 + 78940076 78940116 41 CCAAACGCGAATTGAGACGGACTTTGACAAAACACGAAATG CCAAACGCGAATTGAGACGGACTTTGACAAAACACAAAATG < 41bp 1 0.484308032756294 1 0.996066033840179 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 RPTOR ENSG00000261924 ncRNA_exonic Human antisense chr17:78940096 chr17:78940111 . . 0 hm6A_associated_SNPs_18950 0 0 1 2 78940106 78940126 mRNA hsa-miR-23a RPTOR miRanda miRanda
14034 chr17 78940111 78940111 1 + G A rs8074182 78940096 + 78940076 78940116 41 CCAAACGCGAATTGAGACGGACTTTGACAAAACACGAAATG CCAAACGCGAATTGAGACGGACTTTGACAAAACACAAAATG < 41bp 1 0.484308032756294 1 0.996066033840179 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 RPTOR ENSG00000261924 ncRNA_exonic Human antisense chr17:78940096 chr17:78940111 . . 0 hm6A_associated_SNPs_18950 0 0 1 2 78940106 78940126 mRNA hsa-miR-23b RPTOR miRanda miRanda
14034 chr17 78940111 78940111 1 + G A rs8074182 78940102 + 78940082 78940122 41 GCGAATTGAGACGGACTTTGACAAAACACGAAATGGTAATG GCGAATTGAGACGGACTTTGACAAAACACAAAATGGTAATG < 41bp 1 0.376893193453302 1 0.978535175323486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 RPTOR ENSG00000261924 ncRNA_exonic Human antisense chr17:78940102 chr17:78940111 . . 0 hm6A_associated_SNPs_18951 0 0 1 2 78940106 78940126 mRNA hsa-miR-23a RPTOR miRanda miRanda
14034 chr17 78940111 78940111 1 + G A rs8074182 78940102 + 78940082 78940122 41 GCGAATTGAGACGGACTTTGACAAAACACGAAATGGTAATG GCGAATTGAGACGGACTTTGACAAAACACAAAATGGTAATG < 41bp 1 0.376893193453302 1 0.978535175323486 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 RPTOR ENSG00000261924 ncRNA_exonic Human antisense chr17:78940102 chr17:78940111 . . 0 hm6A_associated_SNPs_18951 0 0 1 2 78940106 78940126 mRNA hsa-miR-23b RPTOR miRanda miRanda
14034 chr17 79083264 79083264 1 + C T rs191850746 79083260 + 79083240 79083280 41 ACAAAAACCGATCTGCATGGACTCCGGTGTGCGCTGTTATC ACAAAAACCGATCTGCATGGACTCTGGTGTGCGCTGTTATC < 41bp 1 0.510146040577688 1 0.95857834815979 experiment 0.979707918844624 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 BAIAP2 ENSG00000175866 intronic Human protein_coding chr17:79083260 chr17:79083264 . . 0 hm6A_associated_SNPs_18962 0 0 1 1 79083245 79083266 mRNA hsa-miR-127-3p BAIAP2 miRanda miRanda
14034 chr17 79668664 79668664 1 + C A rs1128805 79668675 + 79668655 79668695 41 CCATGCTCACGTCCGGAGTAACACTACATACAGTTCACCTG CCATGCTCAAGTCCGGAGTAACACTACATACAGTTCACCTG < 41bp 1 0.555290042894009 1 0.749836266040802 experiment 0.889419914211981 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 HGS ENSG00000262049 ncRNA_exonic Human antisense chr17:79668675 chr17:79668664 . . 0 hm6A_associated_SNPs_18995 0 0 1 1 79668657 79668682 mRNA hsa-miR-142-3p HGS miRanda miRanda
14034 chr17 80685126 80685126 1 + T C rs2243446 80685129 + 80685109 80685149 41 CTTGTTTCTTCACATGCTGGACTAGCTTAAGACCAATGCAG CTTGTTTCTTCACATGCCGGACTAGCTTAAGACCAATGCAG < 41bp 1 0.72927912319247 1 0.941532135009766 experiment 0.541441753615061 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 18 FN3KRP ENSG00000141560 UTR3 Human protein_coding chr17:80685129 chr17:80685126 . . 0 hm6A_associated_SNPs_19052 0 0 1 1 80685110 80685129 mRNA hsa-miR-338-3p FN3KRP miRanda miRanda
14034 chr17 80685126 80685126 1 + T C rs2243446 80685140 + 80685120 80685160 41 ACATGCTGGACTAGCTTAAGACCAATGCAGTAGCTTATTTC ACATGCCGGACTAGCTTAAGACCAATGCAGTAGCTTATTTC < 41bp 1 0.320303616901403 1 0.862858057022095 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 7 FN3KRP ENSG00000141560 UTR3 Human protein_coding chr17:80685140 chr17:80685126 . . 0 hm6A_associated_SNPs_19053 0 0 1 1 80685110 80685129 mRNA hsa-miR-338-3p FN3KRP miRanda miRanda
14034 chr18 211865 211865 1 + G A rs11221 211848 + 211828 211868 41 CCTATTGCAGGCTTTTCCTGACTTTAAAATAAATTGTGATC CCTATTGCAGGCTTTTCCTGACTTTAAAATAAATTGTAATC < 41bp 1 0.664777715685705 1 0.627079546451569 experiment 0.67044456862859 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 38 USP14 ENSG00000101557 UTR3 Human protein_coding chr18:211848 chr18:211865 . . 0 hm6A_associated_SNPs_19068 0 0 1 1 211849 211869 mRNA hsa-miR-383 USP14 miRanda miRanda
14034 chr18 673016 673016 1 - C T rs699517 673032 - 673012 673052 41 ATCCAGCCCAACCCCTAAAGACTGACAATATCCTTCGAGCT ATCCAGCCCAACCCCTAAAGACTGACAATATCCTTCAAGCT < 41bp 1 0.381272177406297 1 0.858721494674683 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 37 ENOSF1;TYMS ENSG00000132199;ENSG00000176890 UTR3 Human other chr18:673032 chr18:673016 . . 0 hm6A_associated_SNPs_19071 0 0 1 2 673008 673029 mRNA hsa-miR-28-5p ENOSF1 miRanda miRanda
14034 chr18 673016 673016 1 - C T rs699517 673032 - 673012 673052 41 ATCCAGCCCAACCCCTAAAGACTGACAATATCCTTCGAGCT ATCCAGCCCAACCCCTAAAGACTGACAATATCCTTCAAGCT < 41bp 1 0.381272177406297 1 0.858721494674683 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 37 ENOSF1;TYMS ENSG00000132199;ENSG00000176890 UTR3 Human other chr18:673032 chr18:673016 . . 0 hm6A_associated_SNPs_19071 0 0 1 2 673008 673030 mRNA hsa-miR-708 ENOSF1 miRanda miRanda
14034 chr18 673086 673086 1 + A G rs2790 673092 + 673072 673112 41 TTGCTCTAAAAGAAAAAGGAACTAGGTCAAAAATCTGTCCG TTGCTCTAAAAGAAGAAGGAACTAGGTCAAAAATCTGTCCG < 41bp 1 0.523924395983273 1 0.954347252845764 experiment 0.952151208033455 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 ENOSF1;TYMS ENSG00000176890 UTR3 Human protein_coding chr18:673092 chr18:673086 . . 0 hm6A_associated_SNPs_19073 0 0 1 2 673081 673101 mRNA hsa-miR-192 TYMS miRanda miRanda
14034 chr18 673086 673086 1 + A G rs2790 673092 + 673072 673112 41 TTGCTCTAAAAGAAAAAGGAACTAGGTCAAAAATCTGTCCG TTGCTCTAAAAGAAGAAGGAACTAGGTCAAAAATCTGTCCG < 41bp 1 0.523924395983273 1 0.954347252845764 experiment 0.952151208033455 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 ENOSF1;TYMS ENSG00000176890 UTR3 Human protein_coding chr18:673092 chr18:673086 . . 0 hm6A_associated_SNPs_19073 0 0 1 2 673081 673101 mRNA hsa-miR-215 TYMS miRanda miRanda
14034 chr18 2802777 2802777 1 + T A rs149176267 2802771 + 2802751 2802791 41 ATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTC ATTTACTGGAATTATTCCAGACATTAAGCCCTTTGGTTGTC < 41bp 1 0.579809498059874 1 0.96971595287323 experiment 0.840381003880253 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 SMCHD1 ENSG00000266049 ncRNA_intronic Human antisense chr18:2802771 chr18:2802777 . . 0 hm6A_associated_SNPs_19083 0 0 1 2 2802776 2802795 mRNA hsa-miR-130a SMCHD1 miRanda miRanda
14034 chr18 2802777 2802777 1 + T A rs149176267 2802771 + 2802751 2802791 41 ATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTC ATTTACTGGAATTATTCCAGACATTAAGCCCTTTGGTTGTC < 41bp 1 0.579809498059874 1 0.96971595287323 experiment 0.840381003880253 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 SMCHD1 ENSG00000266049 ncRNA_intronic Human antisense chr18:2802771 chr18:2802777 . . 0 hm6A_associated_SNPs_19083 0 0 1 2 2802776 2802795 mRNA hsa-miR-130b SMCHD1 miRanda miRanda
14034 chr18 3256043 3256043 1 + A G rs144100939 3256063 + 3256043 3256083 41 ATATGTATCTTTATAATCAGACTGGAAACGGGACTTTCTAT GTATGTATCTTTATAATCAGACTGGAAACGGGACTTTCTAT < 41bp 1 0.539465254591924 1 0.961686551570892 experiment 0.921069490816152 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 LOC104968399 ENSG00000264235 ncRNA_intronic Human antisense chr18:3256063 chr18:3256043 . . 0 hm6A_associated_SNPs_19094 0 0 1 1 3256035 3256058 mRNA hsa-miR-340 MYL12A miRanda miRanda
14034 chr18 3458067 3458067 1 + A G rs549486635 3458054 + 3458034 3458074 41 TTGCACATGGGATTGCTAAAACAGCTTCCTGTTACTGAGAT TTGCACATGGGATTGCTAAAACAGCTTCCTGTTGCTGAGAT < 41bp 1 0.646972027002916 1 0.952460646629333 experiment 0.706055945994167 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458054 chr18:3458067 . . 0 hm6A_associated_SNPs_19096 0 0 1 2 3458056 3458082 mRNA hsa-miR-7 TGIF1 miRanda miRanda
14034 chr18 3458067 3458067 1 + A G rs549486635 3458054 + 3458034 3458074 41 TTGCACATGGGATTGCTAAAACAGCTTCCTGTTACTGAGAT TTGCACATGGGATTGCTAAAACAGCTTCCTGTTGCTGAGAT < 41bp 1 0.646972027002916 1 0.952460646629333 experiment 0.706055945994167 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458054 chr18:3458067 . . 0 hm6A_associated_SNPs_19096 0 0 1 2 3458047 3458069 mRNA hsa-miR-194 TGIF1 miRanda miRanda
14034 chr18 3458100 3458100 1 + A T rs527462805 3458111 + 3458091 3458131 41 AGTCATTCCAAGAACTATAAACTTAAAGCTACTGTAGAAAC AGTCATTCCTAGAACTATAAACTTAAAGCTACTGTAGAAAC < 41bp 1 0.773060190931626 1 0.978115439414978 experiment 0.453879618136748 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458111 chr18:3458100 . . 0 hm6A_associated_SNPs_19097 0 0 1 4 3458079 3458100 mRNA hsa-miR-7 TGIF1 miRanda miRanda
14034 chr18 3458100 3458100 1 + A T rs527462805 3458111 + 3458091 3458131 41 AGTCATTCCAAGAACTATAAACTTAAAGCTACTGTAGAAAC AGTCATTCCTAGAACTATAAACTTAAAGCTACTGTAGAAAC < 41bp 1 0.773060190931626 1 0.978115439414978 experiment 0.453879618136748 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458111 chr18:3458100 . . 0 hm6A_associated_SNPs_19097 0 0 1 4 3458079 3458100 mRNA hsa-miR-1 TGIF1 miRanda miRanda
14034 chr18 3458100 3458100 1 + A T rs527462805 3458111 + 3458091 3458131 41 AGTCATTCCAAGAACTATAAACTTAAAGCTACTGTAGAAAC AGTCATTCCTAGAACTATAAACTTAAAGCTACTGTAGAAAC < 41bp 1 0.773060190931626 1 0.978115439414978 experiment 0.453879618136748 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458111 chr18:3458100 . . 0 hm6A_associated_SNPs_19097 0 0 1 4 3458079 3458100 mRNA hsa-miR-206 TGIF1 miRanda miRanda
14034 chr18 3458100 3458100 1 + A T rs527462805 3458111 + 3458091 3458131 41 AGTCATTCCAAGAACTATAAACTTAAAGCTACTGTAGAAAC AGTCATTCCTAGAACTATAAACTTAAAGCTACTGTAGAAAC < 41bp 1 0.773060190931626 1 0.978115439414978 experiment 0.453879618136748 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458111 chr18:3458100 . . 0 hm6A_associated_SNPs_19097 0 0 1 4 3458081 3458100 mRNA hsa-miR-613 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458235 3458255 mRNA hsa-miR-25 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458230 3458252 mRNA hsa-miR-27a TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458235 3458255 mRNA hsa-miR-32 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458235 3458255 mRNA hsa-miR-92a TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458231 3458251 mRNA hsa-miR-212 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458230 3458252 mRNA hsa-miR-27b TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458231 3458251 mRNA hsa-miR-128 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458230 3458251 mRNA hsa-miR-132 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458234 3458255 mRNA hsa-miR-363 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458233 3458255 mRNA hsa-miR-367 TGIF1 miRanda miRanda
14034 chr18 3458237 3458237 1 + T C rs76499577 3458245 + 3458225 3458265 41 TTTTTTTGTTATTTTTTCAGACTGTGCAATACTTAGAGAAC TTTTTTTGTTATCTTTTCAGACTGTGCAATACTTAGAGAAC < 41bp 1 0.648728738405258 1 0.954187750816345 experiment 0.702542523189483 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458245 chr18:3458237 . . 0 hm6A_associated_SNPs_19098 0 0 1 11 3458235 3458255 mRNA hsa-miR-92b TGIF1 miRanda miRanda
14034 chr18 5238714 5238714 1 + C G rs140349001 5238723 + 5238703 5238743 41 CAACCCGGTCACTGCCCAGGACCTGTTAAAAGTTGAATGGA CAACCCGGTCAGTGCCCAGGACCTGTTAAAAGTTGAATGGA < 41bp 1 0.311804858790568 1 0.994742631912231 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 LINC00667 ENSG00000263753 ncRNA_exonic Human lincRNA chr18:5238723 chr18:5238714 . . 0 hm6A_associated_SNPs_19101 0 0 1 6 5238703 5238724 lncRNA hsa-miR-1343-3p LINC00667 miRanda starBase2
14034 chr18 5238714 5238714 1 + C G rs140349001 5238723 + 5238703 5238743 41 CAACCCGGTCACTGCCCAGGACCTGTTAAAAGTTGAATGGA CAACCCGGTCAGTGCCCAGGACCTGTTAAAAGTTGAATGGA < 41bp 1 0.311804858790568 1 0.994742631912231 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 LINC00667 ENSG00000263753 ncRNA_exonic Human lincRNA chr18:5238723 chr18:5238714 . . 0 hm6A_associated_SNPs_19101 0 0 1 6 5238703 5238724 lncRNA hsa-miR-6783-3p LINC00667 miRanda starBase2
14034 chr18 5238714 5238714 1 + C G rs140349001 5238723 + 5238703 5238743 41 CAACCCGGTCACTGCCCAGGACCTGTTAAAAGTTGAATGGA CAACCCGGTCAGTGCCCAGGACCTGTTAAAAGTTGAATGGA < 41bp 1 0.311804858790568 1 0.994742631912231 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 LINC00667 ENSG00000263753 ncRNA_exonic Human lincRNA chr18:5238723 chr18:5238714 . . 0 hm6A_associated_SNPs_19101 0 0 1 6 5238695 5238719 lncRNA hsa-miR-34a-5p LINC00667 miRanda starBase2
14034 chr18 5238714 5238714 1 + C G rs140349001 5238723 + 5238703 5238743 41 CAACCCGGTCACTGCCCAGGACCTGTTAAAAGTTGAATGGA CAACCCGGTCAGTGCCCAGGACCTGTTAAAAGTTGAATGGA < 41bp 1 0.311804858790568 1 0.994742631912231 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 LINC00667 ENSG00000263753 ncRNA_exonic Human lincRNA chr18:5238723 chr18:5238714 . . 0 hm6A_associated_SNPs_19101 0 0 1 6 5238695 5238719 lncRNA hsa-miR-34c-5p LINC00667 miRanda starBase2
14034 chr18 5238714 5238714 1 + C G rs140349001 5238723 + 5238703 5238743 41 CAACCCGGTCACTGCCCAGGACCTGTTAAAAGTTGAATGGA CAACCCGGTCAGTGCCCAGGACCTGTTAAAAGTTGAATGGA < 41bp 1 0.311804858790568 1 0.994742631912231 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 LINC00667 ENSG00000263753 ncRNA_exonic Human lincRNA chr18:5238723 chr18:5238714 . . 0 hm6A_associated_SNPs_19101 0 0 1 6 5238698 5238719 lncRNA hsa-miR-449a LINC00667 miRanda starBase2
14034 chr18 5238714 5238714 1 + C G rs140349001 5238723 + 5238703 5238743 41 CAACCCGGTCACTGCCCAGGACCTGTTAAAAGTTGAATGGA CAACCCGGTCAGTGCCCAGGACCTGTTAAAAGTTGAATGGA < 41bp 1 0.311804858790568 1 0.994742631912231 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 LINC00667 ENSG00000263753 ncRNA_exonic Human lincRNA chr18:5238723 chr18:5238714 . . 0 hm6A_associated_SNPs_19101 0 0 1 6 5238698 5238719 lncRNA hsa-miR-449b-5p LINC00667 miRanda starBase2
14034 chr18 8406249 8406249 1 + A G rs182038635 8406242 + 8406222 8406262 41 TTTGTGCAAAAGAGATGAAGACTTCTCAATATGCTTATTTT TTTGTGCAAAAGAGATGAAGACTTCTCGATATGCTTATTTT < 41bp 1 0.281954966465461 1 0.926941394805908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 PTPRM ENSG00000173482 UTR3 Human protein_coding chr18:8406242 chr18:8406249 . . 0 hm6A_associated_SNPs_19117 0 0 0 1 8406237 8406257 mRNA hsa-miR-448 PTPRM miRanda miRanda
14034 chr18 8406346 8406346 1 + C A rs79491917 8406350 + 8406330 8406370 41 CCCAGTAATGCTGCTGCCTGACAGAAACACACACACAGCCA CCCAGTAATGCTGCTGACTGACAGAAACACACACACAGCCA < 41bp 1 0.409638667557515 1 0.878762662410736 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 PTPRM ENSG00000173482 UTR3 Human protein_coding chr18:8406350 chr18:8406346 . . 0 hm6A_associated_SNPs_19118 0 0 1 1 8406343 8406369 mRNA hsa-miR-138 PTPRM miRanda miRanda
14034 chr18 8406417 8406417 1 + G A rs116388226 8406421 + 8406401 8406441 41 GGCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGC GGCTTCCTAGAGCAGCATAGACAGCTGGTAAACTGAAGAGC < 41bp 1 0.244258673834199 1 0.897287726402283 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 PTPRM ENSG00000173482 UTR3 Human protein_coding chr18:8406421 chr18:8406417 . . 0 hm6A_associated_SNPs_19119 0 0 0 1 8406405 8406429 mRNA hsa-miR-199b-5p PTPRM miRanda miRanda
14034 chr18 8638275 8638275 1 + G C rs115140842 8638276 + 8638256 8638296 41 GTTGATTTCCTACTTTGGAGACAAAGTGGAAATGATTCCTG GTTGATTTCCTACTTTGGACACAAAGTGGAAATGATTCCTG Direct Loss 1 0.735367892207646 1 0.981940090656281 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 20 RAB12 ENSG00000206418 UTR3 Human protein_coding chr18:8638276 chr18:8638275 . . 0 hm6A_associated_SNPs_19120 0 0 1 2 8638265 8638286 mRNA hsa-miR-204 RAB12 miRanda miRanda
14034 chr18 8638275 8638275 1 + G C rs115140842 8638276 + 8638256 8638296 41 GTTGATTTCCTACTTTGGAGACAAAGTGGAAATGATTCCTG GTTGATTTCCTACTTTGGACACAAAGTGGAAATGATTCCTG Direct Loss 1 0.735367892207646 1 0.981940090656281 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 20 RAB12 ENSG00000206418 UTR3 Human protein_coding chr18:8638276 chr18:8638275 . . 0 hm6A_associated_SNPs_19120 0 0 1 2 8638265 8638286 mRNA hsa-miR-211 RAB12 miRanda miRanda
14034 chr18 9537097 9537097 1 + C T rs16955192 9537092 + 9537072 9537112 41 AGAGTGAACAGCACCGCGAGACAGGCCAGGCTCGTGGCTCG AGAGTGAACAGCACCGCGAGACAGGTCAGGCTCGTGGCTCG < 41bp 1 0.489562569764815 1 0.777531385421753 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 26 RALBP1 ENSG00000017797 UTR3 Human protein_coding chr18:9537092 chr18:9537097 . . 0 hm6A_associated_SNPs_19152 0 0 0 1 9537091 9537114 mRNA hsa-miR-615-3p RALBP1 miRanda miRanda
14034 chr18 10488091 10488091 1 + G T rs1045584 10488109 + 10488089 10488129 41 TTGCTTTACCAAAAGAAAAGACATTTATTCTTTTGATGCAC TTTCTTTACCAAAAGAAAAGACATTTATTCTTTTGATGCAC < 41bp 1 0.62692118079159 1 0.983706891536713 experiment 0.74615763841682 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 3 APCDD1 ENSG00000154856 UTR3 Human protein_coding chr18:10488109 chr18:10488091 . . 0 hm6A_associated_SNPs_19166 0 0 0 1 10488079 10488103 mRNA hsa-miR-9 APCDD1 miRanda miRanda
14034 chr18 12310964 12310964 1 + C A rs34553814 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCAGGGCAGCCCTGGTGGACTTAGAGCCAGGCACCATGG < 41bp 1 0.45584852787705 1 0.881127417087555 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310964 synonymous SNV . 0 hm6A_associated_SNPs_19177 0 0 1 2 12310962 12310985 mRNA hsa-miR-24 TUBB6 miRanda miRanda
14034 chr18 12310964 12310964 1 + C A rs34553814 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCAGGGCAGCCCTGGTGGACTTAGAGCCAGGCACCATGG < 41bp 1 0.45584852787705 1 0.881127417087555 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310964 synonymous SNV . 0 hm6A_associated_SNPs_19177 0 0 1 2 12310956 12310979 mRNA hsa-miR-224 TUBB6 miRanda miRanda
14034 chr18 12987243 12987243 1 + G A rs112381580 12987237 + 12987217 12987257 41 TGTGCGTCTGCATCAAAGGAACATTTGCTTCACTGGGTGAT TGTGCGTCTGCATCAAAGGAACATTTACTTCACTGGGTGAT < 41bp 1 0.502798742693397 1 0.977705001831055 experiment 0.994402514613207 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 SEH1L ENSG00000266969 ncRNA_intronic Human antisense chr18:12987237 chr18:12987243 . . 0 hm6A_associated_SNPs_19184 0 0 1 1 12987241 12987263 mRNA hsa-miR-154 SEH1L miRanda miRanda
14034 chr18 13761042 13761042 1 + C T rs576439303 13761027 + 13761007 13761047 41 AGATGTAGATGTAGTGAAAAACTTCAAGAATGAAGCAGAGC AGATGTAGATGTAGTGAAAAACTTCAAGAATGAAGTAGAGC < 41bp 1 0.110564456704722 1 0.802776575088501 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 RNMT ENSG00000101654 UTR3 Human protein_coding chr18:13761027 chr18:13761042 . . 0 hm6A_associated_SNPs_19195 0 0 1 1 13761042 13761063 mRNA hsa-miR-186 RNMT miRanda miRanda
14034 chr18 21062767 21062767 1 + A G rs568814165 21062762 + 21062742 21062782 41 ATTTGAGAAAGCTGTTTTTAACATTATTTTAAAATGCCAAA ATTTGAGAAAGCTGTTTTTAACATTGTTTTAAAATGCCAAA < 41bp 1 0.35480307616021 1 0.123763650655746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RIOK3 ENSG00000101782 UTR3 Human protein_coding chr18:21062762 chr18:21062767 . . 0 hm6A_associated_SNPs_19218 0 0 1 3 21062760 21062782 mRNA hsa-miR-96 RIOK3 miRanda miRanda
14034 chr18 21062767 21062767 1 + A G rs568814165 21062762 + 21062742 21062782 41 ATTTGAGAAAGCTGTTTTTAACATTATTTTAAAATGCCAAA ATTTGAGAAAGCTGTTTTTAACATTGTTTTAAAATGCCAAA < 41bp 1 0.35480307616021 1 0.123763650655746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RIOK3 ENSG00000101782 UTR3 Human protein_coding chr18:21062762 chr18:21062767 . . 0 hm6A_associated_SNPs_19218 0 0 1 3 21062760 21062782 mRNA hsa-miR-182 RIOK3 miRanda miRanda
14034 chr18 21062767 21062767 1 + A G rs568814165 21062762 + 21062742 21062782 41 ATTTGAGAAAGCTGTTTTTAACATTATTTTAAAATGCCAAA ATTTGAGAAAGCTGTTTTTAACATTGTTTTAAAATGCCAAA < 41bp 1 0.35480307616021 1 0.123763650655746 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RIOK3 ENSG00000101782 UTR3 Human protein_coding chr18:21062762 chr18:21062767 . . 0 hm6A_associated_SNPs_19218 0 0 1 3 21062761 21062782 mRNA hsa-miR-1271 RIOK3 miRanda miRanda
14034 chr18 21736278 21736278 1 + T A rs150107485 21736266 + 21736246 21736286 41 TCAGTCCCCTTGCAGGATGAACAAGAACCTCCTGCTTATGA TCAGTCCCCTTGCAGGATGAACAAGAACCTCCAGCTTATGA < 41bp 1 0.603487950232806 1 0.990515351295471 experiment 0.793024099534388 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 CABYR ENSG00000154040 CDS Human protein_coding chr18:21736266 chr18:21736278 synonymous SNV . 0 hm6A_associated_SNPs_19221 0 0 0 3 21736276 21736297 mRNA hsa-miR-28-5p CABYR miRanda miRanda
14034 chr18 21736278 21736278 1 + T A rs150107485 21736266 + 21736246 21736286 41 TCAGTCCCCTTGCAGGATGAACAAGAACCTCCTGCTTATGA TCAGTCCCCTTGCAGGATGAACAAGAACCTCCAGCTTATGA < 41bp 1 0.603487950232806 1 0.990515351295471 experiment 0.793024099534388 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 CABYR ENSG00000154040 CDS Human protein_coding chr18:21736266 chr18:21736278 synonymous SNV . 0 hm6A_associated_SNPs_19221 0 0 0 3 21736273 21736294 mRNA hsa-miR-590-5p CABYR miRanda miRanda
14034 chr18 21736278 21736278 1 + T A rs150107485 21736266 + 21736246 21736286 41 TCAGTCCCCTTGCAGGATGAACAAGAACCTCCTGCTTATGA TCAGTCCCCTTGCAGGATGAACAAGAACCTCCAGCTTATGA < 41bp 1 0.603487950232806 1 0.990515351295471 experiment 0.793024099534388 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 CABYR ENSG00000154040 CDS Human protein_coding chr18:21736266 chr18:21736278 synonymous SNV . 0 hm6A_associated_SNPs_19221 0 0 0 3 21736275 21736297 mRNA hsa-miR-708 CABYR miRanda miRanda
14034 chr18 21739506 21739506 1 + T A rs143434314 21739501 + 21739481 21739521 41 TGTGGACCCTTTATTGTCTAACTGATAAGAATCAACAAGGT TGTGGACCCTTTATTGTCTAACTGAAAAGAATCAACAAGGT < 41bp 1 0.771587913043074 1 0.951304793357849 experiment 0.456824173913853 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 CABYR ENSG00000154040 CDS Human protein_coding chr18:21739501 chr18:21739506 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_19222 0 0 0 2 21739487 21739507 mRNA hsa-miR-223 CABYR miRanda miRanda
14034 chr18 21739506 21739506 1 + T A rs143434314 21739501 + 21739481 21739521 41 TGTGGACCCTTTATTGTCTAACTGATAAGAATCAACAAGGT TGTGGACCCTTTATTGTCTAACTGAAAAGAATCAACAAGGT < 41bp 1 0.771587913043074 1 0.951304793357849 experiment 0.456824173913853 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 26 CABYR ENSG00000154040 CDS Human protein_coding chr18:21739501 chr18:21739506 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_19222 0 0 0 2 21739487 21739508 mRNA hsa-miR-361-5p CABYR miRanda miRanda
14034 chr18 22031021 22031021 1 + G T rs116241691 22031035 + 22031015 22031055 41 ATTTGGGAGAACTAATTTGAACTTAATCACCACTTCATCTA ATTTGGTAGAACTAATTTGAACTTAATCACCACTTCATCTA < 41bp 1 0.559203182467027 1 0.145779728889465 experiment 0.881593635065945 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 IMPACT ENSG00000154059 UTR3 Human protein_coding chr18:22031035 chr18:22031021 . . 0 hm6A_associated_SNPs_19223 0 0 1 1 22031000 22031024 mRNA hsa-miR-150 IMPACT miRanda miRanda
14034 chr18 23872235 23872235 1 + A G rs12963653 23872242 + 23872222 23872262 41 CCTTCAGGAGGCAATGAAAAACAAGTGACCACAATTTCACA CCTTCAGGAGGCAGTGAAAAACAAGTGACCACAATTTCACA < 41bp 1 0.623399286512006 1 0.097832202911377 experiment 0.753201426975989 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23872242 chr18:23872235 nonsynonymous SNV 0.881 0 hm6A_associated_SNPs_19239 0 0 0 1 23872233 23872256 mRNA hsa-miR-599 TAF4B miRanda miRanda
14034 chr18 23970717 23970717 1 + G A rs13855 23970707 + 23970687 23970727 41 CGTTAGGGCGTTGCTTTCAAACTGATGAGGGGAATGTGAAA CGTTAGGGCGTTGCTTTCAAACTGATGAGGAGAATGTGAAA < 41bp 1 0.184839345775237 1 0.187895953655243 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 TAF4B ENSG00000141384 UTR3 Human protein_coding chr18:23970707 chr18:23970717 . . 0 hm6A_associated_SNPs_19240 0 0 1 2 23970706 23970726 mRNA hsa-miR-23a TAF4B miRanda miRanda
14034 chr18 23970717 23970717 1 + G A rs13855 23970707 + 23970687 23970727 41 CGTTAGGGCGTTGCTTTCAAACTGATGAGGGGAATGTGAAA CGTTAGGGCGTTGCTTTCAAACTGATGAGGAGAATGTGAAA < 41bp 1 0.184839345775237 1 0.187895953655243 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 TAF4B ENSG00000141384 UTR3 Human protein_coding chr18:23970707 chr18:23970717 . . 0 hm6A_associated_SNPs_19240 0 0 1 2 23970706 23970726 mRNA hsa-miR-23b TAF4B miRanda miRanda
14034 chr18 29127153 29127153 1 + A G rs115419348 29127146 + 29127126 29127166 41 TACTTTACTGCACCCAGCAGACTTTCAACAACTCATTGATC TACTTTACTGCACCCAGCAGACTTTCAGCAACTCATTGATC < 41bp 1 0.483362183763306 1 0.514952063560486 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 DSG2-AS1 ENSG00000264859 ncRNA_intronic Human antisense chr18:29127146 chr18:29127153 . . 0 hm6A_associated_SNPs_19250 0 0 1 2 29127149 29127172 mRNA hsa-miR-9 DSG2 miRanda miRanda
14034 chr18 29127153 29127153 1 + A G rs115419348 29127146 + 29127126 29127166 41 TACTTTACTGCACCCAGCAGACTTTCAACAACTCATTGATC TACTTTACTGCACCCAGCAGACTTTCAGCAACTCATTGATC < 41bp 1 0.483362183763306 1 0.514952063560486 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 DSG2-AS1 ENSG00000264859 ncRNA_intronic Human antisense chr18:29127146 chr18:29127153 . . 0 hm6A_associated_SNPs_19250 0 0 1 2 29127136 29127156 mRNA hsa-miR-653 DSG2 miRanda miRanda
14034 chr18 29128091 29128091 1 + C T rs116439025 29128075 + 29128055 29128095 41 TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTACTCAA TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTATTCAA < 41bp 1 0.0630468210042964 1 0.035595029592514 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 DSG2-AS1 ENSG00000264859 ncRNA_intronic Human antisense chr18:29128075 chr18:29128091 . . 0 hm6A_associated_SNPs_19252 0 0 1 2 29128082 29128103 mRNA hsa-miR-374a DSG2 miRanda miRanda
14034 chr18 29128091 29128091 1 + C T rs116439025 29128075 + 29128055 29128095 41 TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTACTCAA TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTATTCAA < 41bp 1 0.0630468210042964 1 0.035595029592514 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 DSG2-AS1 ENSG00000264859 ncRNA_intronic Human antisense chr18:29128075 chr18:29128091 . . 0 hm6A_associated_SNPs_19252 0 0 1 2 29128082 29128103 mRNA hsa-miR-374b DSG2 miRanda miRanda
14034 chr18 29128095 29128095 1 + A T rs185289967 29128075 + 29128055 29128095 41 TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTACTCAA TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTACTCAT < 41bp 1 0.0620196601233243 1 0.0525200068950653 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 41 DSG2-AS1 ENSG00000264859 ncRNA_intronic Human antisense chr18:29128075 chr18:29128095 . . 0 hm6A_associated_SNPs_19253 0 0 1 2 29128082 29128103 mRNA hsa-miR-374a DSG2 miRanda miRanda
14034 chr18 29128095 29128095 1 + A T rs185289967 29128075 + 29128055 29128095 41 TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTACTCAA TTATTGACTGGCTGGGTGTGACTTAGTACATAAGTACTCAT < 41bp 1 0.0620196601233243 1 0.0525200068950653 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 41 DSG2-AS1 ENSG00000264859 ncRNA_intronic Human antisense chr18:29128075 chr18:29128095 . . 0 hm6A_associated_SNPs_19253 0 0 1 2 29128082 29128103 mRNA hsa-miR-374b DSG2 miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468056 32468073 mRNA hsa-miR-15a DTNA miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468052 32468073 mRNA hsa-miR-16 DTNA miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468050 32468072 mRNA hsa-miR-103 DTNA miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468050 32468072 mRNA hsa-miR-107 DTNA miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468056 32468073 mRNA hsa-miR-15b DTNA miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468053 32468073 mRNA hsa-miR-195 DTNA miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468053 32468073 mRNA hsa-miR-424 DTNA miRanda miRanda
14034 chr18 32468059 32468059 1 + A G rs181083183 32468044 + 32468024 32468064 41 CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAAAACCC CATCCCTGGTTAAAAAGCAAACAAACACAGGCTGAGAACCC < 41bp 1 0.214379361862799 1 0.920436382293701 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 DTNA ENSG00000134769 UTR3 Human protein_coding chr18:32468044 chr18:32468059 . . 0 hm6A_associated_SNPs_19259 0 0 1 8 32468057 32468073 mRNA hsa-miR-497 DTNA miRanda miRanda
14034 chr18 32823327 32823327 1 + T C rs182575010 32823339 + 32823319 32823359 41 GAATTAATTGCACTTGACAAACTTGCCACATGTGAGCATCA GAATTAATCGCACTTGACAAACTTGCCACATGTGAGCATCA < 41bp 1 0.340714903785306 1 0.416561007499695 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 9 ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32823339 chr18:32823327 . . 0 hm6A_associated_SNPs_19263 0 0 1 5 32823326 32823333 mRNA hsa-miR-130a ZNF397 miRanda miRanda
14034 chr18 32823327 32823327 1 + T C rs182575010 32823339 + 32823319 32823359 41 GAATTAATTGCACTTGACAAACTTGCCACATGTGAGCATCA GAATTAATCGCACTTGACAAACTTGCCACATGTGAGCATCA < 41bp 1 0.340714903785306 1 0.416561007499695 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 9 ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32823339 chr18:32823327 . . 0 hm6A_associated_SNPs_19263 0 0 1 5 32823326 32823333 mRNA hsa-miR-301a ZNF397 miRanda miRanda
14034 chr18 32823327 32823327 1 + T C rs182575010 32823339 + 32823319 32823359 41 GAATTAATTGCACTTGACAAACTTGCCACATGTGAGCATCA GAATTAATCGCACTTGACAAACTTGCCACATGTGAGCATCA < 41bp 1 0.340714903785306 1 0.416561007499695 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 9 ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32823339 chr18:32823327 . . 0 hm6A_associated_SNPs_19263 0 0 1 5 32823326 32823333 mRNA hsa-miR-130b ZNF397 miRanda miRanda
14034 chr18 32823327 32823327 1 + T C rs182575010 32823339 + 32823319 32823359 41 GAATTAATTGCACTTGACAAACTTGCCACATGTGAGCATCA GAATTAATCGCACTTGACAAACTTGCCACATGTGAGCATCA < 41bp 1 0.340714903785306 1 0.416561007499695 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 9 ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32823339 chr18:32823327 . . 0 hm6A_associated_SNPs_19263 0 0 1 5 32823326 32823333 mRNA hsa-miR-454 ZNF397 miRanda miRanda
14034 chr18 32823327 32823327 1 + T C rs182575010 32823339 + 32823319 32823359 41 GAATTAATTGCACTTGACAAACTTGCCACATGTGAGCATCA GAATTAATCGCACTTGACAAACTTGCCACATGTGAGCATCA < 41bp 1 0.340714903785306 1 0.416561007499695 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 9 ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32823339 chr18:32823327 . . 0 hm6A_associated_SNPs_19263 0 0 1 5 32823326 32823333 mRNA hsa-miR-301b ZNF397 miRanda miRanda
14034 chr18 32826636 32826636 1 + G T rs1060758 32826643 + 32826623 32826663 41 AGGTTATGGGGCTGGTGTGGACTGTGTGAGGCACTTCGTCT AGGTTATGGGGCTTGTGTGGACTGTGTGAGGCACTTCGTCT < 41bp 1 0.312088681987124 1 0.937910497188568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32826643 chr18:32826636 . . 0 hm6A_associated_SNPs_19264 0 0 1 1 32826633 32826653 mRNA hsa-miR-342-3p ZNF397 miRanda miRanda
14034 chr18 32826661 32826661 1 + T A rs1060760 32826643 + 32826623 32826663 41 AGGTTATGGGGCTGGTGTGGACTGTGTGAGGCACTTCGTCT AGGTTATGGGGCTGGTGTGGACTGTGTGAGGCACTTCGACT < 41bp 1 0.336199774528195 1 0.945287644863129 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32826643 chr18:32826661 . . 0 hm6A_associated_SNPs_19265 0 0 1 1 32826647 32826670 mRNA hsa-miR-384 ZNF397 miRanda miRanda
14034 chr18 48573518 48573518 1 + A G rs146104321 48573516 + 48573496 48573536 41 GACAAGGTGGAGAGAGTGAAACATTTGCAAAAAGAGCAATT GACAAGGTGGAGAGAGTGAAACGTTTGCAAAAAGAGCAATT Direct Loss 1 0.664804266555837 1 0.966134548187256 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48573516 chr18:48573518 synonymous SNV . 0 hm6A_associated_SNPs_19300 3 0 1 4 48573505 48573526 mRNA hsa-miR-19a SMAD4 miRanda miRanda
14034 chr18 48573518 48573518 1 + A G rs146104321 48573516 + 48573496 48573536 41 GACAAGGTGGAGAGAGTGAAACATTTGCAAAAAGAGCAATT GACAAGGTGGAGAGAGTGAAACGTTTGCAAAAAGAGCAATT Direct Loss 1 0.664804266555837 1 0.966134548187256 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48573516 chr18:48573518 synonymous SNV . 0 hm6A_associated_SNPs_19300 3 0 1 4 48573504 48573526 mRNA hsa-miR-19b SMAD4 miRanda miRanda
14034 chr18 48573518 48573518 1 + A G rs146104321 48573516 + 48573496 48573536 41 GACAAGGTGGAGAGAGTGAAACATTTGCAAAAAGAGCAATT GACAAGGTGGAGAGAGTGAAACGTTTGCAAAAAGAGCAATT Direct Loss 1 0.664804266555837 1 0.966134548187256 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48573516 chr18:48573518 synonymous SNV . 0 hm6A_associated_SNPs_19300 3 0 1 4 48573509 48573529 mRNA hsa-miR-129-5p SMAD4 miRanda miRanda
14034 chr18 48573518 48573518 1 + A G rs146104321 48573516 + 48573496 48573536 41 GACAAGGTGGAGAGAGTGAAACATTTGCAAAAAGAGCAATT GACAAGGTGGAGAGAGTGAAACGTTTGCAAAAAGAGCAATT Direct Loss 1 0.664804266555837 1 0.966134548187256 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48573516 chr18:48573518 synonymous SNV . 0 hm6A_associated_SNPs_19300 3 0 1 4 48573515 48573537 mRNA hsa-miR-137 SMAD4 miRanda miRanda
14034 chr18 48605522 48605522 1 + A C rs16952798 48605517 + 48605497 48605537 41 GAATCCCTTAAAATTACCAGACAAAAAAATTTAAAATTACG GAATCCCTTAAAATTACCAGACAAACAAATTTAAAATTACG < 41bp 1 0.376167804816019 1 0.760698556900024 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 SMAD4 ENSG00000141646 UTR3 Human protein_coding chr18:48605517 chr18:48605522 . . 0 hm6A_associated_SNPs_19305 3 0 1 1 48605515 48605535 mRNA hsa-miR-590-3p SMAD4 miRanda miRanda
14034 chr18 57570844 57570844 1 + T A rs58665242 57570833 + 57570813 57570853 41 AGAACAAATATTCAGAAGTAACTTGATAAGATATGAATGTT AGAACAAATATTCAGAAGTAACTTGATAAGAAATGAATGTT < 41bp 1 0.317663995390567 1 0.0908111333847046 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570833 chr18:57570844 . . 0 hm6A_associated_SNPs_19335 0 0 1 6 57570829 57570853 mRNA hsa-miR-181a PMAIP1 miRanda miRanda
14034 chr18 57570844 57570844 1 + T A rs58665242 57570833 + 57570813 57570853 41 AGAACAAATATTCAGAAGTAACTTGATAAGATATGAATGTT AGAACAAATATTCAGAAGTAACTTGATAAGAAATGAATGTT < 41bp 1 0.317663995390567 1 0.0908111333847046 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570833 chr18:57570844 . . 0 hm6A_associated_SNPs_19335 0 0 1 6 57570830 57570853 mRNA hsa-miR-181b PMAIP1 miRanda miRanda
14034 chr18 57570844 57570844 1 + T A rs58665242 57570833 + 57570813 57570853 41 AGAACAAATATTCAGAAGTAACTTGATAAGATATGAATGTT AGAACAAATATTCAGAAGTAACTTGATAAGAAATGAATGTT < 41bp 1 0.317663995390567 1 0.0908111333847046 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570833 chr18:57570844 . . 0 hm6A_associated_SNPs_19335 0 0 1 6 57570829 57570853 mRNA hsa-miR-181c PMAIP1 miRanda miRanda
14034 chr18 57570844 57570844 1 + T A rs58665242 57570833 + 57570813 57570853 41 AGAACAAATATTCAGAAGTAACTTGATAAGATATGAATGTT AGAACAAATATTCAGAAGTAACTTGATAAGAAATGAATGTT < 41bp 1 0.317663995390567 1 0.0908111333847046 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570833 chr18:57570844 . . 0 hm6A_associated_SNPs_19335 0 0 1 6 57570835 57570856 mRNA hsa-miR-494 PMAIP1 miRanda miRanda
14034 chr18 57570844 57570844 1 + T A rs58665242 57570833 + 57570813 57570853 41 AGAACAAATATTCAGAAGTAACTTGATAAGATATGAATGTT AGAACAAATATTCAGAAGTAACTTGATAAGAAATGAATGTT < 41bp 1 0.317663995390567 1 0.0908111333847046 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570833 chr18:57570844 . . 0 hm6A_associated_SNPs_19335 0 0 1 6 57570830 57570853 mRNA hsa-miR-181d PMAIP1 miRanda miRanda
14034 chr18 57570844 57570844 1 + T A rs58665242 57570833 + 57570813 57570853 41 AGAACAAATATTCAGAAGTAACTTGATAAGATATGAATGTT AGAACAAATATTCAGAAGTAACTTGATAAGAAATGAATGTT < 41bp 1 0.317663995390567 1 0.0908111333847046 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570833 chr18:57570844 . . 0 hm6A_associated_SNPs_19335 0 0 1 6 57570833 57570854 mRNA hsa-miR-543 PMAIP1 miRanda miRanda
14034 chr18 73000897 73000897 1 + G T rs143844253 73000907 + 73000887 73000927 41 AGTAAAGAAAGACACAAATAACAATGATAAAAAGACATCCT AGTAAAGAAATACACAAATAACAATGATAAAAAGACATCCT < 41bp 1 0.672145633537796 1 0.804018378257751 experiment 0.655708732924408 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 TSHZ1 ENSG00000179981 UTR3 Human protein_coding chr18:73000907 chr18:73000897 . . 0 hm6A_associated_SNPs_19368 0 0 0 2 73000882 73000903 mRNA hsa-miR-187 TSHZ1 miRanda miRanda
14034 chr18 73000897 73000897 1 + G T rs143844253 73000907 + 73000887 73000927 41 AGTAAAGAAAGACACAAATAACAATGATAAAAAGACATCCT AGTAAAGAAATACACAAATAACAATGATAAAAAGACATCCT < 41bp 1 0.672145633537796 1 0.804018378257751 experiment 0.655708732924408 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 TSHZ1 ENSG00000179981 UTR3 Human protein_coding chr18:73000907 chr18:73000897 . . 0 hm6A_associated_SNPs_19368 0 0 0 2 73000885 73000904 mRNA hsa-miR-599 TSHZ1 miRanda miRanda
14034 chr18 74680470 74680470 1 + A G rs470224 74680450 + 74680430 74680470 41 AGAATCATTGTCTTTCAGAGACTCATAGGAAAAAAAAACTA AGAATCATTGTCTTTCAGAGACTCATAGGAAAAAAAAACTG < 41bp 1 0.152229786866381 1 0.904051542282104 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 ZNF236 ENSG00000130856 UTR3 Human protein_coding chr18:74680450 chr18:74680470 . . 0 hm6A_associated_SNPs_19370 0 0 0 1 74680456 74680475 mRNA hsa-miR-384 ZNF236 miRanda miRanda
14034 chr18 77730660 77730660 1 + C T rs116832047 77730653 + 77730633 77730673 41 CCTCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGAC CCTCCCCAGAAATCACACGGACCAGCATCTTGATCTGGGAC < 41bp 1 0.167468225807251 1 0.988813400268555 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730653 chr18:77730660 . . 0 hm6A_associated_SNPs_19385 0 0 1 2 77730642 77730664 mRNA hsa-miR-18a HSBP1L1 miRanda miRanda
14034 chr18 77730660 77730660 1 + C T rs116832047 77730653 + 77730633 77730673 41 CCTCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGAC CCTCCCCAGAAATCACACGGACCAGCATCTTGATCTGGGAC < 41bp 1 0.167468225807251 1 0.988813400268555 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730653 chr18:77730660 . . 0 hm6A_associated_SNPs_19385 0 0 1 2 77730641 77730664 mRNA hsa-miR-18b HSBP1L1 miRanda miRanda
14034 chr18 77730660 77730660 1 + C T rs116832047 77730672 + 77730652 77730692 41 GACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGT GACCAGCATCTTGATCTGGGACTTCCAGAAAACAGAACTGT < 41bp 1 0.161872907859458 1 0.994533240795135 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 9 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730672 chr18:77730660 . . 0 hm6A_associated_SNPs_19386 0 0 1 2 77730642 77730664 mRNA hsa-miR-18a HSBP1L1 miRanda miRanda
14034 chr18 77730660 77730660 1 + C T rs116832047 77730672 + 77730652 77730692 41 GACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGT GACCAGCATCTTGATCTGGGACTTCCAGAAAACAGAACTGT < 41bp 1 0.161872907859458 1 0.994533240795135 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 9 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730672 chr18:77730660 . . 0 hm6A_associated_SNPs_19386 0 0 1 2 77730641 77730664 mRNA hsa-miR-18b HSBP1L1 miRanda miRanda
14034 chr18 77730663 77730663 1 + T G rs113959961 77730653 + 77730633 77730673 41 CCTCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGAC CCTCCCCAGAAATCACACGGACCAGCACCTGGATCTGGGAC < 41bp 1 0.157906163977614 1 0.988377690315247 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730653 chr18:77730663 . . 0 hm6A_associated_SNPs_19387 0 0 1 2 77730642 77730664 mRNA hsa-miR-18a HSBP1L1 miRanda miRanda
14034 chr18 77730663 77730663 1 + T G rs113959961 77730653 + 77730633 77730673 41 CCTCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGAC CCTCCCCAGAAATCACACGGACCAGCACCTGGATCTGGGAC < 41bp 1 0.157906163977614 1 0.988377690315247 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730653 chr18:77730663 . . 0 hm6A_associated_SNPs_19387 0 0 1 2 77730641 77730664 mRNA hsa-miR-18b HSBP1L1 miRanda miRanda
14034 chr18 77730663 77730663 1 + T G rs113959961 77730672 + 77730652 77730692 41 GACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGT GACCAGCACCTGGATCTGGGACTTCCAGAAAACAGAACTGT < 41bp 1 0.179666682832975 1 0.99519956111908 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 12 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730672 chr18:77730663 . . 0 hm6A_associated_SNPs_19388 0 0 1 2 77730642 77730664 mRNA hsa-miR-18a HSBP1L1 miRanda miRanda
14034 chr18 77730663 77730663 1 + T G rs113959961 77730672 + 77730652 77730692 41 GACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGT GACCAGCACCTGGATCTGGGACTTCCAGAAAACAGAACTGT < 41bp 1 0.179666682832975 1 0.99519956111908 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 12 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730672 chr18:77730663 . . 0 hm6A_associated_SNPs_19388 0 0 1 2 77730641 77730664 mRNA hsa-miR-18b HSBP1L1 miRanda miRanda
14034 chr18 77730663 77730663 1 + T G rs113959961 77730683 + 77730663 77730703 41 TGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAG GGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAG < 41bp 1 0.179731477827159 1 0.988139152526855 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730683 chr18:77730663 . . 0 hm6A_associated_SNPs_19389 0 0 1 2 77730642 77730664 mRNA hsa-miR-18a HSBP1L1 miRanda miRanda
14034 chr18 77730663 77730663 1 + T G rs113959961 77730683 + 77730663 77730703 41 TGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAG GGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAG < 41bp 1 0.179731477827159 1 0.988139152526855 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730683 chr18:77730663 . . 0 hm6A_associated_SNPs_19389 0 0 1 2 77730641 77730664 mRNA hsa-miR-18b HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730798 77730816 mRNA hsa-miR-23a HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730798 77730819 mRNA hsa-miR-25 HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730798 77730819 mRNA hsa-miR-32 HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730798 77730820 mRNA hsa-miR-181a HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730799 77730820 mRNA hsa-miR-181b HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730802 77730820 mRNA hsa-miR-181c HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730797 77730816 mRNA hsa-miR-23b HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730798 77730819 mRNA hsa-miR-367 HSBP1L1 miRanda miRanda
14034 chr18 77730807 77730807 1 + C A rs1134231 77730802 + 77730782 77730822 41 TTACAATAAATATACAATAAACTTACAAATGTGGAATGTAA TTACAATAAATATACAATAAACTTAAAAATGTGGAATGTAA < 41bp 1 0.0365100682701274 1 0.926302552223206 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730802 chr18:77730807 . . 0 hm6A_associated_SNPs_19392 0 0 0 9 77730798 77730820 mRNA hsa-miR-181d HSBP1L1 miRanda miRanda
14034 chr18 77805949 77805949 1 + A C rs3744873 77805937 + 77805917 77805957 41 AGGGGCAGGTGGCTGAGCTGACAACGCAGATGAAAAAGGGA AGGGGCAGGTGGCTGAGCTGACAACGCAGATGCAAAAGGGA < 41bp 1 0.790612927202476 1 0.982446610927582 experiment 0.418774145595049 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 RBFA ENSG00000101546 CDS Human protein_coding chr18:77805937 chr18:77805949 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_19393 0 0 1 3 77805938 77805958 mRNA hsa-miR-204 C18orf22 miRanda miRanda
14034 chr18 77805949 77805949 1 + A C rs3744873 77805937 + 77805917 77805957 41 AGGGGCAGGTGGCTGAGCTGACAACGCAGATGAAAAAGGGA AGGGGCAGGTGGCTGAGCTGACAACGCAGATGCAAAAGGGA < 41bp 1 0.790612927202476 1 0.982446610927582 experiment 0.418774145595049 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 RBFA ENSG00000101546 CDS Human protein_coding chr18:77805937 chr18:77805949 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_19393 0 0 1 3 77805938 77805958 mRNA hsa-miR-211 C18orf22 miRanda miRanda
14034 chr18 77805949 77805949 1 + A C rs3744873 77805937 + 77805917 77805957 41 AGGGGCAGGTGGCTGAGCTGACAACGCAGATGAAAAAGGGA AGGGGCAGGTGGCTGAGCTGACAACGCAGATGCAAAAGGGA < 41bp 1 0.790612927202476 1 0.982446610927582 experiment 0.418774145595049 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 RBFA ENSG00000101546 CDS Human protein_coding chr18:77805937 chr18:77805949 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_19393 0 0 1 3 77805948 77805971 mRNA hsa-miR-328 C18orf22 miRanda miRanda
14034 chr18 77897478 77897478 1 + C G rs3809927 77897488 + 77897468 77897508 41 TTTCTCCGTTCAGAGGTAAAACAATAAATTTTTAGTGCCTT TTTCTCCGTTGAGAGGTAAAACAATAAATTTTTAGTGCCTT < 41bp 1 0.221472089348678 1 0.0206269025802612 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 11 ADNP2 ENSG00000101544 UTR3 Human protein_coding chr18:77897488 chr18:77897478 . . 0 hm6A_associated_SNPs_19401 0 0 1 1 77897466 77897487 mRNA hsa-miR-875-5p ADNP2 miRanda miRanda
14034 chr18 77898021 77898021 1 + G A rs187359026 77898024 + 77898004 77898044 41 GATGTGACAGCCTCTGAGAAACATAATGTTACTATGTGGAT GATGTGACAGCCTCTGAAAAACATAATGTTACTATGTGGAT < 41bp 1 0.281373771844362 1 0.569657385349274 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 18 ADNP2 ENSG00000101544 UTR3 Human protein_coding chr18:77898024 chr18:77898021 . . 0 hm6A_associated_SNPs_19402 0 0 1 1 77898021 77898041 mRNA hsa-miR-376c ADNP2 miRanda miRanda
14034 chr19 542077 542077 1 + A G rs16990672 542074 + 542054 542094 41 TTGTTTGAAATCTAAATAAAACTACTTTATGAGAGGCCAGA TTGTTTGAAATCTAAATAAAACTGCTTTATGAGAGGCCAGA < 41bp 1 0.267887100336138 1 0.948868632316589 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 CDC34 ENSG00000099804 UTR3 Human protein_coding chr19:542074 chr19:542077 . . 0 hm6A_associated_SNPs_19405 0 0 1 1 542064 542085 mRNA hsa-miR-340 CDC34 miRanda miRanda
14034 chr19 580388 580388 1 + C A rs2229664 580384 + 580364 580404 41 CTGCTGTGGTTGCAGGGTGGACTCCGACGACCAGTGGGGAG CTGCTGTGGTTGCAGGGTGGACTCAGACGACCAGTGGGGAG < 41bp 1 0.343553882765856 1 0.775122463703156 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 BSG ENSG00000172270 CDS Human protein_coding chr19:580384 chr19:580388 synonymous SNV . 0 hm6A_associated_SNPs_19407 0 0 1 1 580379 580390 mRNA hsa-miR-127-3p BSG miRanda miRanda
14034 chr19 580389 580389 1 + G C rs202113312 580384 + 580364 580404 41 CTGCTGTGGTTGCAGGGTGGACTCCGACGACCAGTGGGGAG CTGCTGTGGTTGCAGGGTGGACTCCCACGACCAGTGGGGAG < 41bp 1 0.302765975192813 1 0.677196085453033 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 BSG ENSG00000172270 CDS Human protein_coding chr19:580384 chr19:580389 nonsynonymous SNV 0.002 0 hm6A_associated_SNPs_19408 0 0 1 1 580379 580390 mRNA hsa-miR-127-3p BSG miRanda miRanda
14034 chr19 972266 972266 1 + G A rs185134878 972278 + 972258 972298 41 TATAAAGAGAATTTAATAAAACAGGGGAAAACCAAGGAACA TATAAAGAAAATTTAATAAAACAGGGGAAAACCAAGGAACA < 41bp 1 0.44243540768118 1 0.920400500297546 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 ARID3A ENSG00000116017 UTR3 Human protein_coding chr19:972278 chr19:972266 . . 0 hm6A_associated_SNPs_19471 0 0 1 3 972263 972285 mRNA hsa-miR-10a ARID3A miRanda miRanda
14034 chr19 972266 972266 1 + G A rs185134878 972278 + 972258 972298 41 TATAAAGAGAATTTAATAAAACAGGGGAAAACCAAGGAACA TATAAAGAAAATTTAATAAAACAGGGGAAAACCAAGGAACA < 41bp 1 0.44243540768118 1 0.920400500297546 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 ARID3A ENSG00000116017 UTR3 Human protein_coding chr19:972278 chr19:972266 . . 0 hm6A_associated_SNPs_19471 0 0 1 3 972263 972285 mRNA hsa-miR-10b ARID3A miRanda miRanda
14034 chr19 972266 972266 1 + G A rs185134878 972278 + 972258 972298 41 TATAAAGAGAATTTAATAAAACAGGGGAAAACCAAGGAACA TATAAAGAAAATTTAATAAAACAGGGGAAAACCAAGGAACA < 41bp 1 0.44243540768118 1 0.920400500297546 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 ARID3A ENSG00000116017 UTR3 Human protein_coding chr19:972278 chr19:972266 . . 0 hm6A_associated_SNPs_19471 0 0 1 3 972262 972284 mRNA hsa-miR-339-5p ARID3A miRanda miRanda
14034 chr19 1038445 1038445 1 + C T rs10419707 1038444 + 1038424 1038464 41 GATTTGCCTAGGACCTTCAGACCAACAGACTTCAGACCCTC GATTTGCCTAGGACCTTCAGATCAACAGACTTCAGACCCTC Direct Loss 1 0.115263795234441 1 0.642050981521606 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 CNN2 ENSG00000064666 UTR3 Human protein_coding chr19:1038444 chr19:1038445 . . 0 hm6A_associated_SNPs_19475 0 0 1 1 1038435 1038456 mRNA hsa-miR-382 CNN2 miRanda miRanda
14034 chr19 2271937 2271937 1 + G A rs533784107 2271950 + 2271930 2271970 41 GCTGCCCGAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG GCTGCCCAAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG < 41bp 1 0.291299476410913 1 0.760986030101776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271950 chr19:2271937 nonsynonymous SNV 0.726 1 hm6A_associated_SNPs_19555 0 0 1 2 2271937 2271953 mRNA hsa-miR-320a OAZ1 miRanda miRanda
14034 chr19 2271937 2271937 1 + G A rs533784107 2271950 + 2271930 2271970 41 GCTGCCCGAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG GCTGCCCAAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG < 41bp 1 0.291299476410913 1 0.760986030101776 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271950 chr19:2271937 nonsynonymous SNV 0.726 1 hm6A_associated_SNPs_19555 0 0 1 2 2271937 2271953 mRNA hsa-miR-320b OAZ1 miRanda miRanda
14034 chr19 3121440 3121440 1 + C G rs566082996 3121432 + 3121412 3121452 41 GCAGCCTTTTTCTGGCCTTGACTTATGGCTCGCTTTTTTCT GCAGCCTTTTTCTGGCCTTGACTTATGGGTCGCTTTTTTCT < 41bp 1 0.423718376436166 1 0.984622359275818 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 29 GNA11 ENSG00000267688 ncRNA_exonic Human antisense chr19:3121432 chr19:3121440 . . 0 hm6A_associated_SNPs_19573 0 0 1 1 3121423 3121445 mRNA hsa-miR-615-3p GNA11 miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209472 + 3209452 3209492 41 CTTCCTTCCTTCCTTCCTGGACAGGTCGTCATGATGGATGC CTTCCTTCCTTCCTTCCTGGACAGGTCGTCAGGATGGATGC < 41bp 1 0.488981176100119 1 0.867416739463806 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 32 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209472 chr19:3209483 . . 0 hm6A_associated_SNPs_19602 0 0 1 5 3209474 3209497 mRNA hsa-miR-148a NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209472 + 3209452 3209492 41 CTTCCTTCCTTCCTTCCTGGACAGGTCGTCATGATGGATGC CTTCCTTCCTTCCTTCCTGGACAGGTCGTCAGGATGGATGC < 41bp 1 0.488981176100119 1 0.867416739463806 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 32 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209472 chr19:3209483 . . 0 hm6A_associated_SNPs_19602 0 0 1 5 3209476 3209497 mRNA hsa-miR-148a NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209472 + 3209452 3209492 41 CTTCCTTCCTTCCTTCCTGGACAGGTCGTCATGATGGATGC CTTCCTTCCTTCCTTCCTGGACAGGTCGTCAGGATGGATGC < 41bp 1 0.488981176100119 1 0.867416739463806 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 32 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209472 chr19:3209483 . . 0 hm6A_associated_SNPs_19602 0 0 1 5 3209477 3209497 mRNA hsa-miR-152 NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209472 + 3209452 3209492 41 CTTCCTTCCTTCCTTCCTGGACAGGTCGTCATGATGGATGC CTTCCTTCCTTCCTTCCTGGACAGGTCGTCAGGATGGATGC < 41bp 1 0.488981176100119 1 0.867416739463806 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 32 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209472 chr19:3209483 . . 0 hm6A_associated_SNPs_19602 0 0 1 5 3209474 3209497 mRNA hsa-miR-148b NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209472 + 3209452 3209492 41 CTTCCTTCCTTCCTTCCTGGACAGGTCGTCATGATGGATGC CTTCCTTCCTTCCTTCCTGGACAGGTCGTCAGGATGGATGC < 41bp 1 0.488981176100119 1 0.867416739463806 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 32 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209472 chr19:3209483 . . 0 hm6A_associated_SNPs_19602 0 0 1 5 3209476 3209497 mRNA hsa-miR-148b NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209497 + 3209477 3209517 41 TCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGG TCGTCAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGG < 41bp 1 0.508912733138711 1 0.863948047161102 experiment 0.982174533722579 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209497 chr19:3209483 . . 0 hm6A_associated_SNPs_19603 0 0 1 5 3209474 3209497 mRNA hsa-miR-148a NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209497 + 3209477 3209517 41 TCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGG TCGTCAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGG < 41bp 1 0.508912733138711 1 0.863948047161102 experiment 0.982174533722579 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209497 chr19:3209483 . . 0 hm6A_associated_SNPs_19603 0 0 1 5 3209476 3209497 mRNA hsa-miR-148a NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209497 + 3209477 3209517 41 TCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGG TCGTCAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGG < 41bp 1 0.508912733138711 1 0.863948047161102 experiment 0.982174533722579 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209497 chr19:3209483 . . 0 hm6A_associated_SNPs_19603 0 0 1 5 3209477 3209497 mRNA hsa-miR-152 NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209497 + 3209477 3209517 41 TCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGG TCGTCAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGG < 41bp 1 0.508912733138711 1 0.863948047161102 experiment 0.982174533722579 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209497 chr19:3209483 . . 0 hm6A_associated_SNPs_19603 0 0 1 5 3209474 3209497 mRNA hsa-miR-148b NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209497 + 3209477 3209517 41 TCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGG TCGTCAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGG < 41bp 1 0.508912733138711 1 0.863948047161102 experiment 0.982174533722579 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209497 chr19:3209483 . . 0 hm6A_associated_SNPs_19603 0 0 1 5 3209476 3209497 mRNA hsa-miR-148b NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209501 + 3209481 3209521 41 CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG CAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG < 41bp 1 0.354770152001268 1 0.688485741615295 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209501 chr19:3209483 . . 0 hm6A_associated_SNPs_19604 0 0 1 5 3209474 3209497 mRNA hsa-miR-148a NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209501 + 3209481 3209521 41 CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG CAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG < 41bp 1 0.354770152001268 1 0.688485741615295 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209501 chr19:3209483 . . 0 hm6A_associated_SNPs_19604 0 0 1 5 3209476 3209497 mRNA hsa-miR-148a NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209501 + 3209481 3209521 41 CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG CAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG < 41bp 1 0.354770152001268 1 0.688485741615295 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209501 chr19:3209483 . . 0 hm6A_associated_SNPs_19604 0 0 1 5 3209477 3209497 mRNA hsa-miR-152 NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209501 + 3209481 3209521 41 CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG CAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG < 41bp 1 0.354770152001268 1 0.688485741615295 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209501 chr19:3209483 . . 0 hm6A_associated_SNPs_19604 0 0 1 5 3209474 3209497 mRNA hsa-miR-148b NCLN miRanda miRanda
14034 chr19 3209483 3209483 1 + T G rs4594 3209501 + 3209481 3209521 41 CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG CAGGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGG < 41bp 1 0.354770152001268 1 0.688485741615295 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209501 chr19:3209483 . . 0 hm6A_associated_SNPs_19604 0 0 1 5 3209476 3209497 mRNA hsa-miR-148b NCLN miRanda miRanda
14034 chr19 4172147 4172147 1 + G A rs7258321 4172144 + 4172124 4172164 41 TGACTGAGGCCCACGCAGGAACCGACACTCAGACACAAGGC TGACTGAGGCCCACGCAGGAACCAACACTCAGACACAAGGC < 41bp 1 0.208733532983144 1 0.0466881692409515 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 CREB3L3 ENSG00000060566 UTR3 Human protein_coding chr19:4172144 chr19:4172147 . . 0 hm6A_associated_SNPs_19643 0 0 0 1 4172143 4172162 mRNA hsa-miR-599 CREB3L3 miRanda miRanda
14034 chr19 4172159 4172159 1 + C A rs113783181 4172144 + 4172124 4172164 41 TGACTGAGGCCCACGCAGGAACCGACACTCAGACACAAGGC TGACTGAGGCCCACGCAGGAACCGACACTCAGACAAAAGGC < 41bp 1 0.269115542457271 1 0.191091895103455 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 36 CREB3L3 ENSG00000060566 UTR3 Human protein_coding chr19:4172144 chr19:4172159 . . 0 hm6A_associated_SNPs_19644 0 0 0 2 4172155 4172176 mRNA hsa-miR-328 CREB3L3 miRanda miRanda
14034 chr19 4172159 4172159 1 + C A rs113783181 4172144 + 4172124 4172164 41 TGACTGAGGCCCACGCAGGAACCGACACTCAGACACAAGGC TGACTGAGGCCCACGCAGGAACCGACACTCAGACAAAAGGC < 41bp 1 0.269115542457271 1 0.191091895103455 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 36 CREB3L3 ENSG00000060566 UTR3 Human protein_coding chr19:4172144 chr19:4172159 . . 0 hm6A_associated_SNPs_19644 0 0 0 2 4172143 4172162 mRNA hsa-miR-599 CREB3L3 miRanda miRanda
14034 chr19 4268821 4268821 1 + G A rs375717316 4268805 + 4268785 4268825 41 TTGGCGTGACTGGAGGCCGGACAGACAAGCGCCAGCGTGCT TTGGCGTGACTGGAGGCCGGACAGACAAGCGCCAGCATGCT < 41bp 1 0.736990703670561 1 0.937021672725677 experiment 0.526018592658877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 CCDC94 ENSG00000105248 UTR3 Human protein_coding chr19:4268805 chr19:4268821 . . 0 hm6A_associated_SNPs_19645 0 0 0 1 4268821 4268842 mRNA hsa-miR-328 CCDC94 miRanda miRanda
14034 chr19 4268821 4268821 1 + G A rs375717316 4268809 + 4268789 4268829 41 CGTGACTGGAGGCCGGACAGACAAGCGCCAGCGTGCTCCAA CGTGACTGGAGGCCGGACAGACAAGCGCCAGCATGCTCCAA < 41bp 1 0.791183288159763 1 0.895663857460022 experiment 0.417633423680474 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 CCDC94 ENSG00000105248 UTR3 Human protein_coding chr19:4268809 chr19:4268821 . . 0 hm6A_associated_SNPs_19646 0 0 0 1 4268821 4268842 mRNA hsa-miR-328 CCDC94 miRanda miRanda
14034 chr19 4502201 4502201 1 + T C rs8887 4502193 + 4502173 4502213 41 TTTCCAACCAACATGAAATGACTATAAATGGTTTTTTAATG TTTCCAACCAACATGAAATGACTATAAACGGTTTTTTAATG < 41bp 1 0.648945924314105 1 0.814316630363464 experiment 0.702108151371791 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 HDGFL2;PLIN4 ENSG00000167674 UTR3 Human protein_coding chr19:4502193 chr19:4502201 . . 0 hm6A_associated_SNPs_19653 0 1 1 1 4502185 4502206 mRNA hsa-miR-451 HDGFRP2 miRanda miRanda
14034 chr19 4961997 4961997 1 + C T rs190355434 4962003 + 4961983 4962023 41 TTTAAATCACATACCTGCAGACAAACTGGAGCAATGTTATT TTTAAATCACATACTTGCAGACAAACTGGAGCAATGTTATT < 41bp 1 0.661668174263952 1 0.336821615695953 experiment 0.676663651472097 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 15 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4962003 chr19:4961997 . . 0 hm6A_associated_SNPs_19666 0 0 0 2 4961989 4962013 mRNA hsa-miR-145 UHRF1 miRanda miRanda
14034 chr19 4961997 4961997 1 + C T rs190355434 4962003 + 4961983 4962023 41 TTTAAATCACATACCTGCAGACAAACTGGAGCAATGTTATT TTTAAATCACATACTTGCAGACAAACTGGAGCAATGTTATT < 41bp 1 0.661668174263952 1 0.336821615695953 experiment 0.676663651472097 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 15 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4962003 chr19:4961997 . . 0 hm6A_associated_SNPs_19666 0 0 0 2 4961990 4962014 mRNA hsa-miR-136 UHRF1 miRanda miRanda
14034 chr19 5909284 5909284 1 + A G rs541905735 5909282 + 5909262 5909302 41 TAAGCATCAGAACAGGCTGAACAGTCAAAAAGTTTTCAAAT TAAGCATCAGAACAGGCTGAACGGTCAAAAAGTTTTCAAAT Direct Loss 1 0.552114562384943 1 0.702341437339783 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 VMAC ENSG00000187650 UTR3 Human protein_coding chr19:5909282 chr19:5909284 . . 0 hm6A_associated_SNPs_19679 0 0 0 1 5909272 5909293 mRNA hsa-miR-129-5p VMAC miRanda miRanda
14034 chr19 6368874 6368874 1 + C G rs1049343 6368879 + 6368859 6368899 41 GACGGGGCATTCCAGCTGAGACACTGTGATTTTAAATTAAA GACGGGGCATTCCAGGTGAGACACTGTGATTTTAAATTAAA < 41bp 1 0.540059744629809 1 0.736777424812317 experiment 0.919880510740382 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 16 CLPP ENSG00000125656 UTR3 Human protein_coding chr19:6368879 chr19:6368874 . . 0 hm6A_associated_SNPs_19683 0 0 1 3 6368868 6368888 mRNA hsa-miR-27a CLPP miRanda miRanda
14034 chr19 6368874 6368874 1 + C G rs1049343 6368879 + 6368859 6368899 41 GACGGGGCATTCCAGCTGAGACACTGTGATTTTAAATTAAA GACGGGGCATTCCAGGTGAGACACTGTGATTTTAAATTAAA < 41bp 1 0.540059744629809 1 0.736777424812317 experiment 0.919880510740382 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 16 CLPP ENSG00000125656 UTR3 Human protein_coding chr19:6368879 chr19:6368874 . . 0 hm6A_associated_SNPs_19683 0 0 1 3 6368868 6368888 mRNA hsa-miR-27b CLPP miRanda miRanda
14034 chr19 6368874 6368874 1 + C G rs1049343 6368879 + 6368859 6368899 41 GACGGGGCATTCCAGCTGAGACACTGTGATTTTAAATTAAA GACGGGGCATTCCAGGTGAGACACTGTGATTTTAAATTAAA < 41bp 1 0.540059744629809 1 0.736777424812317 experiment 0.919880510740382 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 16 CLPP ENSG00000125656 UTR3 Human protein_coding chr19:6368879 chr19:6368874 . . 0 hm6A_associated_SNPs_19683 0 0 1 3 6368867 6368887 mRNA hsa-miR-128 CLPP miRanda miRanda
14034 chr19 6751385 6751385 1 + C T rs367603625 6751388 + 6751368 6751408 41 CTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT CTACCTGTCACACCGGATGGACCCGCTGTGCCTTCTACCAT < 41bp 1 0.694392190978145 1 0.773031234741211 experiment 0.61121561804371 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 TRIP10 ENSG00000269680 ncRNA_exonic Human antisense chr19:6751388 chr19:6751385 . . 0 hm6A_associated_SNPs_19687 0 0 1 2 6751382 6751402 mRNA hsa-miR-124 TRIP10 miRanda miRanda
14034 chr19 6751385 6751385 1 + C T rs367603625 6751388 + 6751368 6751408 41 CTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT CTACCTGTCACACCGGATGGACCCGCTGTGCCTTCTACCAT < 41bp 1 0.694392190978145 1 0.773031234741211 experiment 0.61121561804371 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 TRIP10 ENSG00000269680 ncRNA_exonic Human antisense chr19:6751388 chr19:6751385 . . 0 hm6A_associated_SNPs_19687 0 0 1 2 6751382 6751402 mRNA hsa-miR-506 TRIP10 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536866 7536894 mRNA hsa-miR-17 ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536871 7536894 mRNA hsa-miR-20a ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536873 7536894 mRNA hsa-miR-93 ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536866 7536894 mRNA hsa-miR-106a ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536868 7536894 mRNA hsa-miR-106b ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536871 7536893 mRNA hsa-miR-302a ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536872 7536893 mRNA hsa-miR-302b ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536872 7536893 mRNA hsa-miR-302c ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536872 7536893 mRNA hsa-miR-302d ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536871 7536893 mRNA hsa-miR-372 ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536871 7536893 mRNA hsa-miR-373 ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536871 7536894 mRNA hsa-miR-20b ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536873 7536893 mRNA hsa-miR-520e ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536872 7536893 mRNA hsa-miR-520a-3p ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536871 7536893 mRNA hsa-miR-520b ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536870 7536893 mRNA hsa-miR-520c-3p ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536874 7536894 mRNA hsa-miR-519d ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536870 7536893 mRNA hsa-miR-520d-3p ARHGEF18 miRanda miRanda
14034 chr19 7536888 7536888 1 + C T rs141372539 7536904 + 7536884 7536924 41 GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT GGAGTACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTT < 41bp 1 0.430919259155666 1 0.974960148334503 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536904 chr19:7536888 . . 0 hm6A_associated_SNPs_19699 0 0 1 19 7536877 7536893 mRNA hsa-miR-302e ARHGEF18 miRanda miRanda
14034 chr19 7966780 7966780 1 + C A rs372119316 7966775 + 7966755 7966795 41 CCCCAGAGAGCTATTCAAGGACTTCCTAAGGTGGGTGGACT CCCCAGAGAGCTATTCAAGGACTTCATAAGGTGGGTGGACT < 41bp 1 0.0773283871618335 1 0.0736548900604248 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 LRRC8E ENSG00000214248;ENSG00000171017 UTR5;UTR3 Human other chr19:7966775 chr19:7966780 . . 0 hm6A_associated_SNPs_19709 0 0 1 2 7966778 7966802 mRNA hsa-miR-125b LRRC8E miRanda miRanda
14034 chr19 7966780 7966780 1 + C A rs372119316 7966775 + 7966755 7966795 41 CCCCAGAGAGCTATTCAAGGACTTCCTAAGGTGGGTGGACT CCCCAGAGAGCTATTCAAGGACTTCATAAGGTGGGTGGACT < 41bp 1 0.0773283871618335 1 0.0736548900604248 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 LRRC8E ENSG00000214248;ENSG00000171017 UTR5;UTR3 Human other chr19:7966775 chr19:7966780 . . 0 hm6A_associated_SNPs_19709 0 0 1 2 7966779 7966802 mRNA hsa-miR-125a-5p LRRC8E miRanda miRanda
14034 chr19 7978632 7978632 1 + A G rs566060697 7978651 + 7978631 7978671 41 AAAAAATAACAAAACAAAAAACAAGAAAAAAAAAACACAAA AGAAAATAACAAAACAAAAAACAAGAAAAAAAAAACACAAA < 41bp 1 0.349709253453804 1 0.15554866194725 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 MAP2K7 ENSG00000076984 UTR3 Human protein_coding chr19:7978651 chr19:7978632 . . 0 hm6A_associated_SNPs_19713 0 0 1 1 7978631 7978651 mRNA hsa-miR-129-5p MAP2K7 miRanda miRanda
14034 chr19 8503776 8503776 1 + A T rs73925332 8503766 + 8503746 8503786 41 AGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGC AGGGCGCCCTTAAAGCTGGAACATTCCAGCTAGCTTCTTGC < 41bp 1 0.741550172874947 1 0.920008718967438 experiment 0.516899654250105 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|30867593;GSE121942;miCLIP;HepG2;Control 31 MARCH2 ENSG00000099785 UTR3 Human protein_coding chr19:8503766 chr19:8503776 . . 0 hm6A_associated_SNPs_19721 0 0 1 1 8503758 8503782 mRNA hsa-miR-302c MARCH2 miRanda miRanda
14034 chr19 9272378 9272378 1 + A G rs148696681 9272359 + 9272339 9272379 41 CAGGGTACATTCAGCTCTTAACAAACACAGGAGGACTTAAT CAGGGTACATTCAGCTCTTAACAAACACAGGAGGACTTAGT < 41bp 1 0.660601738482644 1 0.968481659889221 experiment 0.678796523034712 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272359 chr19:9272378 . . 0 hm6A_associated_SNPs_19723 0 0 1 1 9272368 9272387 mRNA hsa-miR-22 ZNF317 miRanda miRanda
14034 chr19 9272378 9272378 1 + A G rs148696681 9272363 + 9272343 9272383 41 GTACATTCAGCTCTTAACAAACACAGGAGGACTTAATGGCA GTACATTCAGCTCTTAACAAACACAGGAGGACTTAGTGGCA < 41bp 1 0.645092042766287 1 0.967939853668213 experiment 0.709815914467426 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272363 chr19:9272378 . . 0 hm6A_associated_SNPs_19724 0 0 1 1 9272368 9272387 mRNA hsa-miR-22 ZNF317 miRanda miRanda
14034 chr19 9272890 9272890 1 + A C rs118007221 9272880 + 9272860 9272900 41 ATGGGGGGAAGATACTCCTGACTTGTAATAAGAAGACATCA ATGGGGGGAAGATACTCCTGACTTGTAATACGAAGACATCA < 41bp 1 0.584606164778869 1 0.941471457481384 experiment 0.830787670442262 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272880 chr19:9272890 . . 0 hm6A_associated_SNPs_19727 0 0 1 7 9272889 9272912 mRNA hsa-miR-15a ZNF317 miRanda miRanda
14034 chr19 9272890 9272890 1 + A C rs118007221 9272880 + 9272860 9272900 41 ATGGGGGGAAGATACTCCTGACTTGTAATAAGAAGACATCA ATGGGGGGAAGATACTCCTGACTTGTAATACGAAGACATCA < 41bp 1 0.584606164778869 1 0.941471457481384 experiment 0.830787670442262 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272880 chr19:9272890 . . 0 hm6A_associated_SNPs_19727 0 0 1 7 9272890 9272912 mRNA hsa-miR-16 ZNF317 miRanda miRanda
14034 chr19 9272890 9272890 1 + A C rs118007221 9272880 + 9272860 9272900 41 ATGGGGGGAAGATACTCCTGACTTGTAATAAGAAGACATCA ATGGGGGGAAGATACTCCTGACTTGTAATACGAAGACATCA < 41bp 1 0.584606164778869 1 0.941471457481384 experiment 0.830787670442262 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272880 chr19:9272890 . . 0 hm6A_associated_SNPs_19727 0 0 1 7 9272889 9272911 mRNA hsa-miR-103 ZNF317 miRanda miRanda
14034 chr19 9272890 9272890 1 + A C rs118007221 9272880 + 9272860 9272900 41 ATGGGGGGAAGATACTCCTGACTTGTAATAAGAAGACATCA ATGGGGGGAAGATACTCCTGACTTGTAATACGAAGACATCA < 41bp 1 0.584606164778869 1 0.941471457481384 experiment 0.830787670442262 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272880 chr19:9272890 . . 0 hm6A_associated_SNPs_19727 0 0 1 7 9272889 9272911 mRNA hsa-miR-107 ZNF317 miRanda miRanda
14034 chr19 9272890 9272890 1 + A C rs118007221 9272880 + 9272860 9272900 41 ATGGGGGGAAGATACTCCTGACTTGTAATAAGAAGACATCA ATGGGGGGAAGATACTCCTGACTTGTAATACGAAGACATCA < 41bp 1 0.584606164778869 1 0.941471457481384 experiment 0.830787670442262 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272880 chr19:9272890 . . 0 hm6A_associated_SNPs_19727 0 0 1 7 9272889 9272912 mRNA hsa-miR-15b ZNF317 miRanda miRanda
14034 chr19 9272890 9272890 1 + A C rs118007221 9272880 + 9272860 9272900 41 ATGGGGGGAAGATACTCCTGACTTGTAATAAGAAGACATCA ATGGGGGGAAGATACTCCTGACTTGTAATACGAAGACATCA < 41bp 1 0.584606164778869 1 0.941471457481384 experiment 0.830787670442262 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272880 chr19:9272890 . . 0 hm6A_associated_SNPs_19727 0 0 1 7 9272889 9272912 mRNA hsa-miR-195 ZNF317 miRanda miRanda
14034 chr19 9272890 9272890 1 + A C rs118007221 9272880 + 9272860 9272900 41 ATGGGGGGAAGATACTCCTGACTTGTAATAAGAAGACATCA ATGGGGGGAAGATACTCCTGACTTGTAATACGAAGACATCA < 41bp 1 0.584606164778869 1 0.941471457481384 experiment 0.830787670442262 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9272880 chr19:9272890 . . 0 hm6A_associated_SNPs_19727 0 0 1 7 9272889 9272912 mRNA hsa-miR-424 ZNF317 miRanda miRanda
14034 chr19 9273300 9273300 1 + C A rs1045354 9273286 + 9273266 9273306 41 GATTTTCCGGTGAATACGGGACTGCACGTACTCTCTCATCA GATTTTCCGGTGAATACGGGACTGCACGTACTCTATCATCA < 41bp 1 0.769164879514928 1 0.985612392425537 experiment 0.461670240970145 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 35 ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9273286 chr19:9273300 . . 0 hm6A_associated_SNPs_19729 0 1 1 1 9273289 9273310 mRNA hsa-miR-433 ZNF317 miRanda miRanda
14034 chr19 9452698 9452698 1 + G A rs74575837 9452693 + 9452673 9452713 41 GAAACCATATAAATGCAGTGACTGTGAAAAAGGCTTACCTT GAAACCATATAAATGCAGTGACTGTAAAAAAGGCTTACCTT < 41bp 1 0.581738861987614 1 0.995837211608887 experiment 0.836522276024772 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452693 chr19:9452698 nonsynonymous SNV 0.066 1 hm6A_associated_SNPs_19732 0 0 1 3 9452680 9452700 mRNA hsa-miR-27a ZNF559 miRanda miRanda
14034 chr19 9452698 9452698 1 + G A rs74575837 9452693 + 9452673 9452713 41 GAAACCATATAAATGCAGTGACTGTGAAAAAGGCTTACCTT GAAACCATATAAATGCAGTGACTGTAAAAAAGGCTTACCTT < 41bp 1 0.581738861987614 1 0.995837211608887 experiment 0.836522276024772 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452693 chr19:9452698 nonsynonymous SNV 0.066 1 hm6A_associated_SNPs_19732 0 0 1 3 9452677 9452698 mRNA hsa-miR-101 ZNF559 miRanda miRanda
14034 chr19 9452698 9452698 1 + G A rs74575837 9452693 + 9452673 9452713 41 GAAACCATATAAATGCAGTGACTGTGAAAAAGGCTTACCTT GAAACCATATAAATGCAGTGACTGTAAAAAAGGCTTACCTT < 41bp 1 0.581738861987614 1 0.995837211608887 experiment 0.836522276024772 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452693 chr19:9452698 nonsynonymous SNV 0.066 1 hm6A_associated_SNPs_19732 0 0 1 3 9452680 9452700 mRNA hsa-miR-27b ZNF559 miRanda miRanda
14034 chr19 9453160 9453160 1 + C T rs150358404 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGTGAACTCACACTGG < 41bp 1 0.510967810823711 1 0.988134562969208 experiment 0.978064378352578 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453160 stopgain 0.242 0 hm6A_associated_SNPs_19733 0 0 1 3 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453160 9453160 1 + C T rs150358404 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGTGAACTCACACTGG < 41bp 1 0.510967810823711 1 0.988134562969208 experiment 0.978064378352578 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453160 stopgain 0.242 0 hm6A_associated_SNPs_19733 0 0 1 3 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453160 9453160 1 + C T rs150358404 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGTGAACTCACACTGG < 41bp 1 0.510967810823711 1 0.988134562969208 experiment 0.978064378352578 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453160 stopgain 0.242 0 hm6A_associated_SNPs_19733 0 0 1 3 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453160 9453160 1 + C T rs150358404 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGTGAACTCACACTGGAGAAAAGCCT < 41bp 1 0.558386885455041 1 0.988470852375031 experiment 0.883226229089918 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453160 stopgain 0.242 0 hm6A_associated_SNPs_19734 0 0 1 3 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453160 9453160 1 + C T rs150358404 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGTGAACTCACACTGGAGAAAAGCCT < 41bp 1 0.558386885455041 1 0.988470852375031 experiment 0.883226229089918 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453160 stopgain 0.242 0 hm6A_associated_SNPs_19734 0 0 1 3 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453160 9453160 1 + C T rs150358404 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGTGAACTCACACTGGAGAAAAGCCT < 41bp 1 0.558386885455041 1 0.988470852375031 experiment 0.883226229089918 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453160 stopgain 0.242 0 hm6A_associated_SNPs_19734 0 0 1 3 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453161 9453161 1 + G A rs138021555 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCAAACTCACACTGG < 41bp 1 0.487871628508966 1 0.982529282569885 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453161 nonsynonymous SNV 0.262 2 hm6A_associated_SNPs_19735 0 0 1 3 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453161 9453161 1 + G A rs138021555 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCAAACTCACACTGG < 41bp 1 0.487871628508966 1 0.982529282569885 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453161 nonsynonymous SNV 0.262 2 hm6A_associated_SNPs_19735 0 0 1 3 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453161 9453161 1 + G A rs138021555 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCAAACTCACACTGG < 41bp 1 0.487871628508966 1 0.982529282569885 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453161 nonsynonymous SNV 0.262 2 hm6A_associated_SNPs_19735 0 0 1 3 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453161 9453161 1 + G A rs138021555 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCAAACTCACACTGGAGAAAAGCCT < 41bp 1 0.363467406925841 1 0.974505066871643 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453161 nonsynonymous SNV 0.262 2 hm6A_associated_SNPs_19736 0 0 1 3 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453161 9453161 1 + G A rs138021555 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCAAACTCACACTGGAGAAAAGCCT < 41bp 1 0.363467406925841 1 0.974505066871643 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453161 nonsynonymous SNV 0.262 2 hm6A_associated_SNPs_19736 0 0 1 3 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453161 9453161 1 + G A rs138021555 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCAAACTCACACTGGAGAAAAGCCT < 41bp 1 0.363467406925841 1 0.974505066871643 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453161 nonsynonymous SNV 0.262 2 hm6A_associated_SNPs_19736 0 0 1 3 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453577 9453577 1 + A G rs537984803 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACGTGAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.319236052510042 1 0.971735537052155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453577 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_19737 0 0 1 3 9453573 9453594 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453577 9453577 1 + A G rs537984803 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACGTGAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.319236052510042 1 0.971735537052155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453577 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_19737 0 0 1 3 9453571 9453594 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453577 9453577 1 + A G rs537984803 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACGTGAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.319236052510042 1 0.971735537052155 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453577 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_19737 0 0 1 3 9453572 9453593 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9454053 9454053 1 + G A rs76385929 9454034 + 9454014 9454054 41 ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATGC ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATAC < 41bp 1 0.281158608006704 1 0.96458637714386 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 ZNF559 ENSG00000188321 UTR3 Human protein_coding chr19:9454034 chr19:9454053 . . 0 hm6A_associated_SNPs_19739 0 0 1 6 9454047 9454066 mRNA hsa-miR-23a ZNF559 miRanda miRanda
14034 chr19 9454053 9454053 1 + G A rs76385929 9454034 + 9454014 9454054 41 ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATGC ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATAC < 41bp 1 0.281158608006704 1 0.96458637714386 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 ZNF559 ENSG00000188321 UTR3 Human protein_coding chr19:9454034 chr19:9454053 . . 0 hm6A_associated_SNPs_19739 0 0 1 6 9454041 9454064 mRNA hsa-miR-181a ZNF559 miRanda miRanda
14034 chr19 9454053 9454053 1 + G A rs76385929 9454034 + 9454014 9454054 41 ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATGC ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATAC < 41bp 1 0.281158608006704 1 0.96458637714386 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 ZNF559 ENSG00000188321 UTR3 Human protein_coding chr19:9454034 chr19:9454053 . . 0 hm6A_associated_SNPs_19739 0 0 1 6 9454041 9454064 mRNA hsa-miR-181b ZNF559 miRanda miRanda
14034 chr19 9454053 9454053 1 + G A rs76385929 9454034 + 9454014 9454054 41 ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATGC ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATAC < 41bp 1 0.281158608006704 1 0.96458637714386 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 ZNF559 ENSG00000188321 UTR3 Human protein_coding chr19:9454034 chr19:9454053 . . 0 hm6A_associated_SNPs_19739 0 0 1 6 9454041 9454064 mRNA hsa-miR-181c ZNF559 miRanda miRanda
14034 chr19 9454053 9454053 1 + G A rs76385929 9454034 + 9454014 9454054 41 ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATGC ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATAC < 41bp 1 0.281158608006704 1 0.96458637714386 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 ZNF559 ENSG00000188321 UTR3 Human protein_coding chr19:9454034 chr19:9454053 . . 0 hm6A_associated_SNPs_19739 0 0 1 6 9454047 9454066 mRNA hsa-miR-23b ZNF559 miRanda miRanda
14034 chr19 9454053 9454053 1 + G A rs76385929 9454034 + 9454014 9454054 41 ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATGC ATCTTACTGAGTCTGTTTGAACTCATGCTGGAGAGAAATAC < 41bp 1 0.281158608006704 1 0.96458637714386 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 ZNF559 ENSG00000188321 UTR3 Human protein_coding chr19:9454034 chr19:9454053 . . 0 hm6A_associated_SNPs_19739 0 0 1 6 9454041 9454064 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr19 9960114 9960114 1 + G A rs138973404 9960108 + 9960088 9960128 41 GATTCTCCCTTAAGGAATTGACTTCAGCAGGGGTGGGAGGC GATTCTCCCTTAAGGAATTGACTTCAACAGGGGTGGGAGGC < 41bp 1 0.348172233752048 1 0.891305148601532 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 PIN1 ENSG00000127445 UTR3 Human protein_coding chr19:9960108 chr19:9960114 . . 0 hm6A_associated_SNPs_19742 0 0 1 1 9960097 9960119 mRNA hsa-miR-370 PIN1 miRanda miRanda
14034 chr19 10203171 10203171 1 + A G rs15723 10203167 + 10203147 10203187 41 ACAGTGGGAAGTTCTGTGGGACACATTGGCACTGAGCCACA ACAGTGGGAAGTTCTGTGGGACACGTTGGCACTGAGCCACA < 41bp 1 0.788615351330653 1 0.767156660556793 experiment 0.422769297338695 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 ANGPTL6;C19orf66 ENSG00000130812;ENSG00000130813 UTR3 Human other chr19:10203167 chr19:10203171 . . 0 hm6A_associated_SNPs_19745 0 0 1 2 10203163 10203185 mRNA hsa-miR-24 C19orf66 miRanda miRanda
14034 chr19 10203171 10203171 1 + A G rs15723 10203167 + 10203147 10203187 41 ACAGTGGGAAGTTCTGTGGGACACATTGGCACTGAGCCACA ACAGTGGGAAGTTCTGTGGGACACGTTGGCACTGAGCCACA < 41bp 1 0.788615351330653 1 0.767156660556793 experiment 0.422769297338695 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 ANGPTL6;C19orf66 ENSG00000130812;ENSG00000130813 UTR3 Human other chr19:10203167 chr19:10203171 . . 0 hm6A_associated_SNPs_19745 0 0 1 2 10203157 10203180 mRNA hsa-miR-454 C19orf66 miRanda miRanda
14034 chr19 10225751 10225751 1 - C A rs537538801 10225760 - 10225740 10225780 41 CACTGTGTACTCGGTCCGGGACCCTTGGCGACAGAAGACAG CACTGTGTACTCGGTCCGGGACCCTTGGCTACAGAAGACAG < 41bp 1 0.496600390013141 1 0.799644589424133 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 30 EIF3G;P2RY11;PPAN-P2RY11 ENSG00000130811;ENSG00000244165 UTR3 Human other chr19:10225760 chr19:10225751 . . 0 hm6A_associated_SNPs_19754 0 0 1 1 10225735 10225756 mRNA hsa-miR-485-5p EIF3G miRanda miRanda
14034 chr19 10225777 10225777 1 - A G rs7401 10225760 - 10225740 10225780 41 CACTGTGTACTCGGTCCGGGACCCTTGGCGACAGAAGACAG CACCGTGTACTCGGTCCGGGACCCTTGGCGACAGAAGACAG < 41bp 1 0.482346955151265 1 0.81761908531189 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 EIF3G;P2RY11;PPAN-P2RY11 ENSG00000130811;ENSG00000244165 UTR3 Human other chr19:10225760 chr19:10225777 . . 0 hm6A_associated_SNPs_19757 0 0 1 1 10225773 10225789 mRNA hsa-miR-128 EIF3G miRanda miRanda
14034 chr19 10396206 10396206 1 + C T rs547642698 10396205 + 10396185 10396225 41 AGCCAAGAGGAAGGAGCAAGACTCAAGACATGATTGATGGA AGCCAAGAGGAAGGAGCAAGATTCAAGACATGATTGATGGA Direct Loss 1 0.757198415565074 1 0.560356855392456 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ICAM1 ENSG00000090339 UTR3 Human protein_coding chr19:10396205 chr19:10396206 . . 0 hm6A_associated_SNPs_19761 0 0 0 1 10396189 10396207 mRNA hsa-miR-431 ICAM1 miRanda miRanda
14034 chr19 10396206 10396206 1 + C T rs547642698 10396212 + 10396192 10396232 41 AGGAAGGAGCAAGACTCAAGACATGATTGATGGATGTTAAA AGGAAGGAGCAAGATTCAAGACATGATTGATGGATGTTAAA < 41bp 1 0.76527114398304 1 0.803625285625458 experiment 0.46945771203392 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 ICAM1 ENSG00000090339 UTR3 Human protein_coding chr19:10396212 chr19:10396206 . . 0 hm6A_associated_SNPs_19762 0 0 0 1 10396189 10396207 mRNA hsa-miR-431 ICAM1 miRanda miRanda
14034 chr19 10396649 10396649 1 + C T rs147622302 10396643 + 10396623 10396663 41 AAAGATCAAATGGGGCTGGGACTTCTCATTGGCCAACCTGC AAAGATCAAATGGGGCTGGGACTTCTTATTGGCCAACCTGC < 41bp 1 0.740312044491323 1 0.706252336502075 experiment 0.519375911017354 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 ICAM1 ENSG00000267607 ncRNA_exonic Human antisense chr19:10396643 chr19:10396649 . . 0 hm6A_associated_SNPs_19765 0 0 1 1 10396637 10396659 mRNA hsa-miR-182 ICAM1 miRanda miRanda
14034 chr19 10396651 10396651 1 + T C rs142396903 10396643 + 10396623 10396663 41 AAAGATCAAATGGGGCTGGGACTTCTCATTGGCCAACCTGC AAAGATCAAATGGGGCTGGGACTTCTCACTGGCCAACCTGC < 41bp 1 0.774659071538949 1 0.608751952648163 experiment 0.450681856922101 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 ICAM1 ENSG00000267607 ncRNA_exonic Human antisense chr19:10396643 chr19:10396651 . . 0 hm6A_associated_SNPs_19766 0 0 1 1 10396637 10396659 mRNA hsa-miR-182 ICAM1 miRanda miRanda
14034 chr19 10795492 10795492 1 + C T rs115147862 10795491 + 10795471 10795511 41 GCATTACTTTATTTAAAGAGACAGACAATGACGCATTTTAA GCATTACTTTATTTAAAGAGATAGACAATGACGCATTTTAA Direct Loss 1 0.234557157623049 1 0.825621962547302 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10795491 chr19:10795492 . . 0 hm6A_associated_SNPs_19773 0 0 1 1 10795481 10795501 mRNA hsa-miR-219-5p ILF3 miRanda miRanda
14034 chr19 10795492 10795492 1 + C T rs115147862 10795495 + 10795475 10795515 41 TACTTTATTTAAAGAGACAGACAATGACGCATTTTAATCTA TACTTTATTTAAAGAGATAGACAATGACGCATTTTAATCTA < 41bp 1 0.369928811827822 1 0.870885252952576 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10795495 chr19:10795492 . . 0 hm6A_associated_SNPs_19774 0 0 1 1 10795481 10795501 mRNA hsa-miR-219-5p ILF3 miRanda miRanda
14034 chr19 10800193 10800193 1 + A G rs188406525 10800179 + 10800159 10800199 41 CATATTTAGCCGTGTTTGGGACTCCGTGTCTTCAATGGTTT CATATTTAGCCGTGTTTGGGACTCCGTGTCTTCAGTGGTTT < 41bp 1 0.71027474709875 1 0.837404549121857 experiment 0.579450505802501 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800179 chr19:10800193 . . 0 hm6A_associated_SNPs_19779 0 0 1 2 10800188 10800212 mRNA hsa-miR-183 ILF3 miRanda miRanda
14034 chr19 10800193 10800193 1 + A G rs188406525 10800179 + 10800159 10800199 41 CATATTTAGCCGTGTTTGGGACTCCGTGTCTTCAATGGTTT CATATTTAGCCGTGTTTGGGACTCCGTGTCTTCAGTGGTTT < 41bp 1 0.71027474709875 1 0.837404549121857 experiment 0.579450505802501 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 35 ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800179 chr19:10800193 . . 0 hm6A_associated_SNPs_19779 0 0 1 2 10800181 10800203 mRNA hsa-miR-495 ILF3 miRanda miRanda
14034 chr19 10942563 10942563 1 + G A rs77603768 10942551 + 10942531 10942571 41 ACTCTGTATTCTATTAATAAACTAAAATAAAGGGAAGACGC ACTCTGTATTCTATTAATAAACTAAAATAAAGAGAAGACGC < 41bp 1 0.190139101847535 1 0.104913532733917 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942551 chr19:10942563 . . 0 hm6A_associated_SNPs_19802 0 0 1 3 10942545 10942566 mRNA hsa-miR-204 DNM2 miRanda miRanda
14034 chr19 10942563 10942563 1 + G A rs77603768 10942551 + 10942531 10942571 41 ACTCTGTATTCTATTAATAAACTAAAATAAAGGGAAGACGC ACTCTGTATTCTATTAATAAACTAAAATAAAGAGAAGACGC < 41bp 1 0.190139101847535 1 0.104913532733917 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942551 chr19:10942563 . . 0 hm6A_associated_SNPs_19802 0 0 1 3 10942545 10942566 mRNA hsa-miR-211 DNM2 miRanda miRanda
14034 chr19 10942563 10942563 1 + G A rs77603768 10942551 + 10942531 10942571 41 ACTCTGTATTCTATTAATAAACTAAAATAAAGGGAAGACGC ACTCTGTATTCTATTAATAAACTAAAATAAAGAGAAGACGC < 41bp 1 0.190139101847535 1 0.104913532733917 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942551 chr19:10942563 . . 0 hm6A_associated_SNPs_19802 0 0 1 3 10942554 10942576 mRNA hsa-miR-503 DNM2 miRanda miRanda
14034 chr19 11944270 11944270 1 + T A rs10411874 11944273 + 11944253 11944293 41 TTGCCTACTTCCTTTCATAGACATGAAAAGACTCACACTGG TTGCCTACTTCCTTTCAAAGACATGAAAAGACTCACACTGG < 41bp 1 0.466524683774856 1 0.991906046867371 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF440 ENSG00000171295 UTR3 Human protein_coding chr19:11944273 chr19:11944270 . . 0 hm6A_associated_SNPs_19846 0 0 1 1 11944250 11944270 mRNA hsa-miR-488 ZNF440 miRanda miRanda
14034 chr19 11944270 11944270 1 + T A rs10411874 11944283 + 11944263 11944303 41 CCTTTCATAGACATGAAAAGACTCACACTGGAAGGAAACAC CCTTTCAAAGACATGAAAAGACTCACACTGGAAGGAAACAC < 41bp 1 0.513729931486318 1 0.993847489356995 experiment 0.972540137027364 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 ZNF440 ENSG00000171295 UTR3 Human protein_coding chr19:11944283 chr19:11944270 . . 0 hm6A_associated_SNPs_19847 0 0 1 1 11944250 11944270 mRNA hsa-miR-488 ZNF440 miRanda miRanda
14034 chr19 11979919 11979919 1 + A G rs10405375 11979932 + 11979912 11979952 41 TTGCTTAATTGCTTTCATAGACATGTAAAGACACACCAGAA TTGCTTAGTTGCTTTCATAGACATGTAAAGACACACCAGAA < 41bp 1 0.548757083699745 1 0.987713515758514 experiment 0.90248583260051 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 ZNF439 ENSG00000171291 UTR3 Human protein_coding chr19:11979932 chr19:11979919 . . 0 hm6A_associated_SNPs_19850 0 0 0 1 11979909 11979931 mRNA hsa-miR-340 ZNF439 miRanda miRanda
14034 chr19 13055262 13055262 1 + G C rs557569683 13055264 + 13055244 13055284 41 CTCACACTGAGAATGTAAGAACTACAAACAAAATTTCTATT CTCACACTGAGAATGTAACAACTACAAACAAAATTTCTATT Direct Loss 1 0.411388898675637 1 0.592025935649872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 19 CALR ENSG00000267458 ncRNA_exonic Human antisense chr19:13055264 chr19:13055262 . . 0 hm6A_associated_SNPs_19867 0 0 1 3 13055254 13055275 mRNA hsa-miR-375 CALR miRanda miRanda
14034 chr19 13055262 13055262 1 + G C rs557569683 13055264 + 13055244 13055284 41 CTCACACTGAGAATGTAAGAACTACAAACAAAATTTCTATT CTCACACTGAGAATGTAACAACTACAAACAAAATTTCTATT Direct Loss 1 0.411388898675637 1 0.592025935649872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 19 CALR ENSG00000267458 ncRNA_exonic Human antisense chr19:13055264 chr19:13055262 . . 0 hm6A_associated_SNPs_19867 0 0 1 3 13055262 13055283 mRNA hsa-miR-539 CALR miRanda miRanda
14034 chr19 13055262 13055262 1 + G C rs557569683 13055264 + 13055244 13055284 41 CTCACACTGAGAATGTAAGAACTACAAACAAAATTTCTATT CTCACACTGAGAATGTAACAACTACAAACAAAATTTCTATT Direct Loss 1 0.411388898675637 1 0.592025935649872 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 19 CALR ENSG00000267458 ncRNA_exonic Human antisense chr19:13055264 chr19:13055262 . . 0 hm6A_associated_SNPs_19867 0 0 1 3 13055259 13055279 mRNA hsa-miR-590-3p CALR miRanda miRanda
14034 chr19 13884800 13884800 1 + T C rs1044733 13884818 + 13884798 13884838 41 CTTGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC CTCGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC < 41bp 1 0.145116524026235 1 0.251985281705856 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 MRI1 ENSG00000267633 ncRNA_exonic Human antisense chr19:13884818 chr19:13884800 . . 0 hm6A_associated_SNPs_19876 0 0 1 4 13884797 13884823 mRNA hsa-let-7g MRI1 miRanda miRanda
14034 chr19 13884800 13884800 1 + T C rs1044733 13884818 + 13884798 13884838 41 CTTGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC CTCGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC < 41bp 1 0.145116524026235 1 0.251985281705856 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 MRI1 ENSG00000267633 ncRNA_exonic Human antisense chr19:13884818 chr19:13884800 . . 0 hm6A_associated_SNPs_19876 0 0 1 4 13884800 13884823 mRNA hsa-let-7i MRI1 miRanda miRanda
14034 chr19 13884800 13884800 1 + T C rs1044733 13884818 + 13884798 13884838 41 CTTGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC CTCGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC < 41bp 1 0.145116524026235 1 0.251985281705856 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 MRI1 ENSG00000267633 ncRNA_exonic Human antisense chr19:13884818 chr19:13884800 . . 0 hm6A_associated_SNPs_19876 0 0 1 4 13884790 13884808 mRNA hsa-miR-124 MRI1 miRanda miRanda
14034 chr19 13884800 13884800 1 + T C rs1044733 13884818 + 13884798 13884838 41 CTTGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC CTCGTGCCTTGAGCTTACTGACCTCAACACCCTGGTTCCAC < 41bp 1 0.145116524026235 1 0.251985281705856 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 MRI1 ENSG00000267633 ncRNA_exonic Human antisense chr19:13884818 chr19:13884800 . . 0 hm6A_associated_SNPs_19876 0 0 1 4 13884788 13884808 mRNA hsa-miR-506 MRI1 miRanda miRanda
14034 chr19 13889092 13889092 1 + T C rs148041466 13889105 + 13889085 13889125 41 GCTGCACTGTCAGGAAGAGGACCCTGTCCCCCAGCACTGGG GCTGCACCGTCAGGAAGAGGACCCTGTCCCCCAGCACTGGG < 41bp 1 0.798869832982128 1 0.992559790611267 experiment 0.402260334035744 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 C19orf53 ENSG00000104979 UTR3 Human protein_coding chr19:13889105 chr19:13889092 . . 0 hm6A_associated_SNPs_19877 0 0 1 1 13889075 13889098 mRNA hsa-miR-139-5p C19orf53 miRanda miRanda
14034 chr19 13889190 13889190 1 + G A rs189118512 13889197 + 13889177 13889217 41 CCAGGAAGATACAGTCACTAACTTCATCTGTCCCCGTGCCC CCAGGAAGATACAATCACTAACTTCATCTGTCCCCGTGCCC < 41bp 1 0.763029973355408 1 0.947947204113007 experiment 0.473940053289183 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 C19orf53 ENSG00000104979 UTR3 Human protein_coding chr19:13889197 chr19:13889190 . . 0 hm6A_associated_SNPs_19878 0 0 1 1 13889173 13889195 mRNA hsa-miR-134 C19orf53 miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163203 14163227 mRNA hsa-miR-302b IL27RA miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163203 14163227 mRNA hsa-miR-302c IL27RA miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163203 14163227 mRNA hsa-miR-302d IL27RA miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163203 14163227 mRNA hsa-miR-373 IL27RA miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163204 14163227 mRNA hsa-miR-520e IL27RA miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163204 14163227 mRNA hsa-miR-520b IL27RA miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163203 14163227 mRNA hsa-miR-520c-3p IL27RA miRanda miRanda
14034 chr19 14163208 14163208 1 + C G rs575649935 14163196 + 14163176 14163216 41 AGCCCTCTTGATGGATGAAGACACTGAGGACTCAGAGAGGC AGCCCTCTTGATGGATGAAGACACTGAGGACTGAGAGAGGC < 41bp 1 0.722543302622883 1 0.894881129264832 experiment 0.554913394754234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163196 chr19:14163208 . . 0 hm6A_associated_SNPs_19881 0 0 0 8 14163202 14163227 mRNA hsa-miR-520d-3p IL27RA miRanda miRanda
14034 chr19 14163501 14163501 1 + G A rs138673803 14163502 + 14163482 14163522 41 AGCCTGGGCAATATAGCAAGACCCCTCACTACAAAAATAAA AGCCTGGGCAATATAGCAAAACCCCTCACTACAAAAATAAA < 41bp 1 0.188710580289951 1 0.0209455788135529 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 20 IL27RA ENSG00000104998 UTR3 Human protein_coding chr19:14163502 chr19:14163501 . . 0 hm6A_associated_SNPs_19883 0 0 1 1 14163484 14163504 mRNA hsa-miR-431 IL27RA miRanda miRanda
14034 chr19 15730502 15730502 1 + C A rs61746468 15730483 + 15730463 15730503 41 AGTGTTGGTGACAAGTGGAGACACCACCGTCGCTTGTGACG AGTGTTGGTGACAAGTGGAGACACCACCGTCGCTTGTGAAG < 41bp 1 0.0633073003266495 1 0.0454630553722382 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 CYP4F8 ENSG00000186526 ncRNA_exonic Human protein_coding chr19:15730483 chr19:15730502 . 0.159 2 hm6A_associated_SNPs_19900 0 0 0 1 15730499 15730520 mRNA hsa-miR-203 CYP4F8 miRanda miRanda
14034 chr19 15945564 15945564 1 + A C rs79937340 15945558 + 15945538 15945578 41 TTAGGCCGAGAGCCGATCAGACAAACAACCTACAACCCTTA TTAGGCCGAGAGCCGATCAGACAAACCACCTACAACCCTTA < 41bp 1 0.0717278541938313 1 0.926970660686493 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945558 chr19:15945564 . . 0 hm6A_associated_SNPs_19903 0 0 1 2 15945554 15945577 mRNA hsa-miR-296-3p UCA1 miRanda miRanda
14034 chr19 15945564 15945564 1 + A C rs79937340 15945558 + 15945538 15945578 41 TTAGGCCGAGAGCCGATCAGACAAACAACCTACAACCCTTA TTAGGCCGAGAGCCGATCAGACAAACCACCTACAACCCTTA < 41bp 1 0.0717278541938313 1 0.926970660686493 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945558 chr19:15945564 . . 0 hm6A_associated_SNPs_19903 0 0 1 2 15945564 15945586 mRNA hsa-miR-708 UCA1 miRanda miRanda
14034 chr19 15945564 15945564 1 + A C rs79937340 15945562 + 15945542 15945582 41 GCCGAGAGCCGATCAGACAAACAACCTACAACCCTTAAGCT GCCGAGAGCCGATCAGACAAACCACCTACAACCCTTAAGCT < 41bp 1 0.0330753381154028 1 0.882277429103851 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945562 chr19:15945564 . . 0 hm6A_associated_SNPs_19904 0 0 1 2 15945554 15945577 mRNA hsa-miR-296-3p UCA1 miRanda miRanda
14034 chr19 15945564 15945564 1 + A C rs79937340 15945562 + 15945542 15945582 41 GCCGAGAGCCGATCAGACAAACAACCTACAACCCTTAAGCT GCCGAGAGCCGATCAGACAAACCACCTACAACCCTTAAGCT < 41bp 1 0.0330753381154028 1 0.882277429103851 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945562 chr19:15945564 . . 0 hm6A_associated_SNPs_19904 0 0 1 2 15945564 15945586 mRNA hsa-miR-708 UCA1 miRanda miRanda
14034 chr19 15945850 15945850 1 + A C rs73927767 15945855 + 15945835 15945875 41 AGCCTACTCTCATGAAATGGACAACAGTACACGCATATGGG AGCCTACTCTCATGACATGGACAACAGTACACGCATATGGG < 41bp 1 0.125317734159141 1 0.979832768440247 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945855 chr19:15945850 . . 0 hm6A_associated_SNPs_19908 0 0 1 1 15945846 15945867 mRNA hsa-miR-134 UCA1 miRanda miRanda
14034 chr19 15945861 15945861 1 + G C rs73927768 15945855 + 15945835 15945875 41 AGCCTACTCTCATGAAATGGACAACAGTACACGCATATGGG AGCCTACTCTCATGAAATGGACAACACTACACGCATATGGG < 41bp 1 0.126919756551369 1 0.980261087417603 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945855 chr19:15945861 . . 0 hm6A_associated_SNPs_19909 0 0 1 2 15945846 15945867 mRNA hsa-miR-134 UCA1 miRanda miRanda
14034 chr19 15945861 15945861 1 + G C rs73927768 15945855 + 15945835 15945875 41 AGCCTACTCTCATGAAATGGACAACAGTACACGCATATGGG AGCCTACTCTCATGAAATGGACAACACTACACGCATATGGG < 41bp 1 0.126919756551369 1 0.980261087417603 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945855 chr19:15945861 . . 0 hm6A_associated_SNPs_19909 0 0 1 2 15945861 15945882 mRNA hsa-miR-193b UCA1 miRanda miRanda
14034 chr19 15945866 15945866 1 + C T rs113210746 15945855 + 15945835 15945875 41 AGCCTACTCTCATGAAATGGACAACAGTACACGCATATGGG AGCCTACTCTCATGAAATGGACAACAGTACATGCATATGGG < 41bp 1 0.1199477265062 1 0.979026257991791 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945855 chr19:15945866 . . 0 hm6A_associated_SNPs_19910 0 0 1 3 15945846 15945867 mRNA hsa-miR-134 UCA1 miRanda miRanda
14034 chr19 15945866 15945866 1 + C T rs113210746 15945855 + 15945835 15945875 41 AGCCTACTCTCATGAAATGGACAACAGTACACGCATATGGG AGCCTACTCTCATGAAATGGACAACAGTACATGCATATGGG < 41bp 1 0.1199477265062 1 0.979026257991791 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945855 chr19:15945866 . . 0 hm6A_associated_SNPs_19910 0 0 1 3 15945862 15945882 mRNA hsa-miR-193a-3p UCA1 miRanda miRanda
14034 chr19 15945866 15945866 1 + C T rs113210746 15945855 + 15945835 15945875 41 AGCCTACTCTCATGAAATGGACAACAGTACACGCATATGGG AGCCTACTCTCATGAAATGGACAACAGTACATGCATATGGG < 41bp 1 0.1199477265062 1 0.979026257991791 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945855 chr19:15945866 . . 0 hm6A_associated_SNPs_19910 0 0 1 3 15945861 15945882 mRNA hsa-miR-193b UCA1 miRanda miRanda
14034 chr19 15945931 15945931 1 + T C rs73927770 15945915 + 15945895 15945935 41 CAACCAGACCAGCATCCAGGACAACACAAAGTATGTTGTTT CAACCAGACCAGCATCCAGGACAACACAAAGTATGTCGTTT < 41bp 1 0.0608559777079286 1 0.973710298538208 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 UCA1 ENSG00000214049;ENSG00000267308 ncRNA_exonic Human other chr19:15945915 chr19:15945931 . . 0 hm6A_associated_SNPs_19911 0 0 0 1 15945920 15945939 mRNA hsa-miR-495 UCA1 miRanda miRanda
14034 chr19 15946629 15946629 1 + C T rs12982687 15946619 + 15946599 15946639 41 AAAAACCACAAAGAAGTGAAACAGCCAGTTCCTGCCTTAAC AAAAACCACAAAGAAGTGAAACAGCCAGTTTCTGCCTTAAC < 41bp 1 0.0267164981628696 1 0.916978716850281 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 UCA1 ENSG00000214049;ENSG00000267308 ncRNA_exonic Human other chr19:15946619 chr19:15946629 . . 0 hm6A_associated_SNPs_19913 0 0 0 1 15946612 15946633 lncRNA hsa-miR-873-5p UCA1 miRanda starBase2
14034 chr19 15946654 15946654 1 + T G rs73927772 15946674 + 15946654 15946694 41 TACGACATTCCACCATTATGACTTGTCCACCATTATGACTT GACGACATTCCACCATTATGACTTGTCCACCATTATGACTT < 41bp 1 0.0763749214238384 1 0.985632359981537 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 UCA1 ENSG00000214049;ENSG00000267308 ncRNA_exonic Human other chr19:15946674 chr19:15946654 . . 0 hm6A_associated_SNPs_19914 0 0 0 3 15946644 15946665 lncRNA hsa-miR-1-3p UCA1 miRanda starBase2
14034 chr19 15946654 15946654 1 + T G rs73927772 15946674 + 15946654 15946694 41 TACGACATTCCACCATTATGACTTGTCCACCATTATGACTT GACGACATTCCACCATTATGACTTGTCCACCATTATGACTT < 41bp 1 0.0763749214238384 1 0.985632359981537 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 UCA1 ENSG00000214049;ENSG00000267308 ncRNA_exonic Human other chr19:15946674 chr19:15946654 . . 0 hm6A_associated_SNPs_19914 0 0 0 3 15946644 15946665 lncRNA hsa-miR-206 UCA1 miRanda starBase2
14034 chr19 15946654 15946654 1 + T G rs73927772 15946674 + 15946654 15946694 41 TACGACATTCCACCATTATGACTTGTCCACCATTATGACTT GACGACATTCCACCATTATGACTTGTCCACCATTATGACTT < 41bp 1 0.0763749214238384 1 0.985632359981537 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 UCA1 ENSG00000214049;ENSG00000267308 ncRNA_exonic Human other chr19:15946674 chr19:15946654 . . 0 hm6A_associated_SNPs_19914 0 0 0 3 15946646 15946665 lncRNA hsa-miR-613 UCA1 miRanda starBase2
14034 chr19 16243266 16243266 1 + G A rs367890287 16243279 + 16243259 16243299 41 AGAAATCGTTTATTTTAGTAACTGTCTGATCTTTTTCAACT AGAAATCATTTATTTTAGTAACTGTCTGATCTTTTTCAACT < 41bp 1 0.4978436717777 1 0.89802086353302 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 RAB8A ENSG00000269243 ncRNA_intronic Human antisense chr19:16243279 chr19:16243266 . . 0 hm6A_associated_SNPs_19925 0 0 1 2 16243263 16243284 mRNA hsa-miR-101 RAB8A miRanda miRanda
14034 chr19 16243266 16243266 1 + G A rs367890287 16243279 + 16243259 16243299 41 AGAAATCGTTTATTTTAGTAACTGTCTGATCTTTTTCAACT AGAAATCATTTATTTTAGTAACTGTCTGATCTTTTTCAACT < 41bp 1 0.4978436717777 1 0.89802086353302 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 RAB8A ENSG00000269243 ncRNA_intronic Human antisense chr19:16243279 chr19:16243266 . . 0 hm6A_associated_SNPs_19925 0 0 1 2 16243264 16243288 mRNA hsa-miR-421 RAB8A miRanda miRanda
14034 chr19 16244226 16244226 1 + G A rs1043407 16244212 + 16244192 16244232 41 CCATAGGGACTGCGACTGGGACCAGGTCAACCACGCCAGGG CCATAGGGACTGCGACTGGGACCAGGTCAACCACACCAGGG < 41bp 1 0.223630309700215 1 0.972490787506104 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 35 RAB8A ENSG00000269243 ncRNA_exonic Human antisense chr19:16244212 chr19:16244226 . . 0 hm6A_associated_SNPs_19934 0 0 1 1 16244224 16244246 mRNA hsa-miR-138 RAB8A miRanda miRanda
14034 chr19 16302585 16302585 1 + C T rs537089469 16302598 + 16302578 16302618 41 TTACGGACGTCTCAGGGGTGACAGGACCAGGGCAGAGCCCC TTACGGATGTCTCAGGGGTGACAGGACCAGGGCAGAGCCCC < 41bp 1 0.317345058029105 1 0.789295315742493 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 FAM32A ENSG00000105058 UTR3 Human protein_coding chr19:16302598 chr19:16302585 . . 0 hm6A_associated_SNPs_19940 0 0 1 1 16302571 16302595 mRNA hsa-miR-125b FAM32A miRanda miRanda
14034 chr19 16302585 16302585 1 + C T rs537089469 16302603 + 16302583 16302623 41 GACGTCTCAGGGGTGACAGGACCAGGGCAGAGCCCCGGTAC GATGTCTCAGGGGTGACAGGACCAGGGCAGAGCCCCGGTAC < 41bp 1 0.292129806533208 1 0.662207007408142 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 FAM32A ENSG00000105058 UTR3 Human protein_coding chr19:16302603 chr19:16302585 . . 0 hm6A_associated_SNPs_19941 0 0 1 1 16302571 16302595 mRNA hsa-miR-125b FAM32A miRanda miRanda
14034 chr19 17417565 17417565 1 + C T rs6903 17417564 + 17417544 17417584 41 AGATGAGAGCTCATTAAAAGACAATTACAAAGCTTATCACA AGATGAGAGCTCATTAAAAGATAATTACAAAGCTTATCACA Direct Loss 1 0.176706945876148 1 0.911282181739807 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 MRPL34 ENSG00000130312 UTR3 Human protein_coding chr19:17417564 chr19:17417565 . . 0 hm6A_associated_SNPs_19988 0 0 1 1 17417550 17417570 mRNA hsa-miR-219-5p MRPL34 miRanda miRanda
14034 chr19 17616384 17616384 1 + G A rs77674303 17616391 + 17616371 17616411 41 CCTGAAAGCTTCCGGAATTGACTGTGACCACTTGGATGTCA CCTGAAAGCTTCCAGAATTGACTGTGACCACTTGGATGTCA < 41bp 1 0.375763003665144 1 0.961999297142029 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 14 SLC27A1 ENSG00000269439 ncRNA_intronic Human lincRNA chr19:17616391 chr19:17616384 . . 0 hm6A_associated_SNPs_20002 0 0 1 2 17616382 17616398 mRNA hsa-miR-27a SLC27A1 miRanda miRanda
14034 chr19 17616384 17616384 1 + G A rs77674303 17616391 + 17616371 17616411 41 CCTGAAAGCTTCCGGAATTGACTGTGACCACTTGGATGTCA CCTGAAAGCTTCCAGAATTGACTGTGACCACTTGGATGTCA < 41bp 1 0.375763003665144 1 0.961999297142029 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 14 SLC27A1 ENSG00000269439 ncRNA_intronic Human lincRNA chr19:17616391 chr19:17616384 . . 0 hm6A_associated_SNPs_20002 0 0 1 2 17616381 17616398 mRNA hsa-miR-27b SLC27A1 miRanda miRanda
14034 chr19 17616770 17616770 1 + C T rs115113291 17616754 + 17616734 17616774 41 ATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTCGCTG ATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTTGCTG < 41bp 1 0.213004744711443 1 0.841557145118713 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 SLC27A1 ENSG00000269439 ncRNA_intronic Human lincRNA chr19:17616754 chr19:17616770 . . 0 hm6A_associated_SNPs_20004 0 0 1 3 17616760 17616781 mRNA hsa-miR-29a SLC27A1 miRanda miRanda
14034 chr19 17616770 17616770 1 + C T rs115113291 17616754 + 17616734 17616774 41 ATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTCGCTG ATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTTGCTG < 41bp 1 0.213004744711443 1 0.841557145118713 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 SLC27A1 ENSG00000269439 ncRNA_intronic Human lincRNA chr19:17616754 chr19:17616770 . . 0 hm6A_associated_SNPs_20004 0 0 1 3 17616759 17616781 mRNA hsa-miR-29b SLC27A1 miRanda miRanda
14034 chr19 17616770 17616770 1 + C T rs115113291 17616754 + 17616734 17616774 41 ATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTCGCTG ATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTTGCTG < 41bp 1 0.213004744711443 1 0.841557145118713 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 SLC27A1 ENSG00000269439 ncRNA_intronic Human lincRNA chr19:17616754 chr19:17616770 . . 0 hm6A_associated_SNPs_20004 0 0 1 3 17616760 17616781 mRNA hsa-miR-29c SLC27A1 miRanda miRanda
14034 chr19 18288810 18288810 1 + A G rs2921 18288794 + 18288774 18288814 41 TGCCTTTTTTTCTGATCCAGACCCTCGGCACCTGCTACTTA TGCCTTTTTTTCTGATCCAGACCCTCGGCACCTGCTGCTTA < 41bp 1 0.245124354511137 1 0.856381297111511 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 IFI30 ENSG00000216490;ENSG00000268173 UTR3 Human other chr19:18288794 chr19:18288810 . . 0 hm6A_associated_SNPs_20044 0 0 1 1 18288802 18288824 mRNA hsa-miR-145 IFI30 miRanda miRanda
14034 chr19 18499815 18499815 1 + G C rs1054564 18499832 + 18499812 18499852 41 ATGGGCTCAAGGTTCCTGAGACACCCGATTCCTGCCCAAAC ATGCGCTCAAGGTTCCTGAGACACCCGATTCCTGCCCAAAC < 41bp 1 0.728161112837752 1 0.883970499038696 experiment 0.543677774324496 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 4 GDF15 ENSG00000130513 UTR3 Human protein_coding chr19:18499832 chr19:18499815 . . 0 hm6A_associated_SNPs_20057 0 1 1 1 18499811 18499830 mRNA hsa-miR-873 GDF15 miRanda miRanda
14034 chr19 18499830 18499830 1 + A C rs114929417 18499832 + 18499812 18499852 41 ATGGGCTCAAGGTTCCTGAGACACCCGATTCCTGCCCAAAC ATGGGCTCAAGGTTCCTGCGACACCCGATTCCTGCCCAAAC Direct Loss 1 0.738497453121407 1 0.894980192184448 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 GDF15 ENSG00000130513 UTR3 Human protein_coding chr19:18499832 chr19:18499830 . . 0 hm6A_associated_SNPs_20058 0 0 1 1 18499811 18499830 mRNA hsa-miR-873 GDF15 miRanda miRanda
14034 chr19 18679655 18679655 1 + C T rs57907504 18679641 + 18679621 18679661 41 TGGCTCCTTCCTTCCTCAGAACATCTCTATTCTGCAAGACC TGGCTCCTTCCTTCCTCAGAACATCTCTATTCTGTAAGACC < 41bp 1 0.59294969609535 1 0.702512383460999 experiment 0.814100607809299 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 KXD1 ENSG00000268983 ncRNA_intronic Human antisense chr19:18679641 chr19:18679655 . . 0 hm6A_associated_SNPs_20063 0 0 1 1 18679641 18679661 mRNA hsa-miR-431 C19orf50 miRanda miRanda
14034 chr19 18688115 18688115 1 + G A rs28485448 18688134 + 18688114 18688154 41 GGAAGAACCACTCTTAATGGACAAAAAGAAAGAAAGGGGAG GAAAGAACCACTCTTAATGGACAAAAAGAAAGAAAGGGGAG < 41bp 1 0.416714696286818 1 0.911284327507019 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 2 UBA52 ENSG00000221983 UTR3 Human protein_coding chr19:18688134 chr19:18688115 . . 0 hm6A_associated_SNPs_20066 0 0 1 1 18688105 18688126 mRNA hsa-miR-140-5p UBA52 miRanda miRanda
14034 chr19 20236202 20236202 1 + G A rs559065037 20236199 + 20236179 20236219 41 AGACATCCTCATCCAGTATGACCGGACCCTGCTGGTAGCTG AGACATCCTCATCCAGTATGACCAGACCCTGCTGGTAGCTG < 41bp 1 0.116559150378503 1 0.980117917060852 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 ZNF90;ZNF486 ENSG00000224864;ENSG00000267383 ncRNA_exonic Human other chr19:20236199 chr19:20236202 . 0.447 0 hm6A_associated_SNPs_20118 0 0 1 2 20236197 20236219 mRNA hsa-miR-29a ZNF90 miRanda miRanda
14034 chr19 20236202 20236202 1 + G A rs559065037 20236199 + 20236179 20236219 41 AGACATCCTCATCCAGTATGACCGGACCCTGCTGGTAGCTG AGACATCCTCATCCAGTATGACCAGACCCTGCTGGTAGCTG < 41bp 1 0.116559150378503 1 0.980117917060852 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 ZNF90;ZNF486 ENSG00000224864;ENSG00000267383 ncRNA_exonic Human other chr19:20236199 chr19:20236202 . 0.447 0 hm6A_associated_SNPs_20118 0 0 1 2 20236191 20236213 mRNA hsa-miR-214 ZNF90 miRanda miRanda
14034 chr19 20236202 20236202 1 + G A rs559065037 20236204 + 20236184 20236224 41 TCCTCATCCAGTATGACCGGACCCTGCTGGTAGCTGATCCC TCCTCATCCAGTATGACCAGACCCTGCTGGTAGCTGATCCC < 41bp 1 0.134922982683717 1 0.969624102115631 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 ZNF90;ZNF486 ENSG00000224864;ENSG00000267383 ncRNA_exonic Human other chr19:20236204 chr19:20236202 . 0.447 0 hm6A_associated_SNPs_20119 0 0 1 2 20236197 20236219 mRNA hsa-miR-29a ZNF90 miRanda miRanda
14034 chr19 20236202 20236202 1 + G A rs559065037 20236204 + 20236184 20236224 41 TCCTCATCCAGTATGACCGGACCCTGCTGGTAGCTGATCCC TCCTCATCCAGTATGACCAGACCCTGCTGGTAGCTGATCCC < 41bp 1 0.134922982683717 1 0.969624102115631 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 ZNF90;ZNF486 ENSG00000224864;ENSG00000267383 ncRNA_exonic Human other chr19:20236204 chr19:20236202 . 0.447 0 hm6A_associated_SNPs_20119 0 0 1 2 20236191 20236213 mRNA hsa-miR-214 ZNF90 miRanda miRanda
14034 chr19 21241345 21241345 1 + A G rs11880964 21241335 + 21241315 21241355 41 TGCTTTTGACAACACCTAAAACTTTTAAACATAAAAAATCA TGCTTTTGACAACACCTAAAACTTTTAAACGTAAAAAATCA < 41bp 1 0.533663092770465 1 0.945294499397278 experiment 0.93267381445907 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 31 ZNF430 ENSG00000118620 UTR3 Human protein_coding chr19:21241335 chr19:21241345 . . 0 hm6A_associated_SNPs_20124 0 0 1 1 21241344 21241365 mRNA hsa-miR-197 ZNF430 miRanda miRanda
14034 chr19 21301806 21301806 1 + T C rs147366447 21301813 + 21301793 21301833 41 TAAATTATACAAATATAAAGACTGAAAAAGCCATTAATATA TAAATTATACAAACATAAAGACTGAAAAAGCCATTAATATA < 41bp 1 0.569121260937878 1 0.896592438220978 experiment 0.861757478124243 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 ZNF714 ENSG00000160352 UTR3 Human protein_coding chr19:21301813 chr19:21301806 . . 0 hm6A_associated_SNPs_20135 0 0 1 2 21301803 21301827 mRNA hsa-miR-135a ZNF714 miRanda miRanda
14034 chr19 21301806 21301806 1 + T C rs147366447 21301813 + 21301793 21301833 41 TAAATTATACAAATATAAAGACTGAAAAAGCCATTAATATA TAAATTATACAAACATAAAGACTGAAAAAGCCATTAATATA < 41bp 1 0.569121260937878 1 0.896592438220978 experiment 0.861757478124243 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 ZNF714 ENSG00000160352 UTR3 Human protein_coding chr19:21301813 chr19:21301806 . . 0 hm6A_associated_SNPs_20135 0 0 1 2 21301803 21301827 mRNA hsa-miR-135b ZNF714 miRanda miRanda
14034 chr19 21367426 21367426 1 + C T rs192625512 21367441 + 21367421 21367461 41 GAAAACGCCTACATGTGTGAACAATATGGCAAAACTTAATG GAAAATGCCTACATGTGTGAACAATATGGCAAAACTTAATG < 41bp 1 0.248166850951371 1 0.965299725532532 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 ZNF431 ENSG00000196705 UTR3 Human protein_coding chr19:21367441 chr19:21367426 . . 0 hm6A_associated_SNPs_20141 0 0 1 1 21367418 21367441 mRNA hsa-miR-377 ZNF431 miRanda miRanda
14034 chr19 21609173 21609173 1 + G A rs113355038 21609159 + 21609139 21609179 41 GAAAAATTGTAGAAATATAGACTGTGAAAAAGACGTCAATA GAAAAATTGTAGAAATATAGACTGTGAAAAAGACATCAATA < 41bp 1 0.0396305774025115 1 0.983395457267761 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 ZNF493 ENSG00000196268 UTR3 Human protein_coding chr19:21609159 chr19:21609173 . . 0 hm6A_associated_SNPs_20153 0 0 1 1 21609165 21609189 mRNA hsa-miR-542-3p ZNF493 miRanda miRanda
14034 chr19 30106557 30106557 1 + G A rs148905508 30106571 + 30106551 30106591 41 ACCGGGGTTAACACTGGTTGACTTGAATAGGATTATTCGAT ACCGGGATTAACACTGGTTGACTTGAATAGGATTATTCGAT < 41bp 1 0.689064450111855 1 0.725462257862091 experiment 0.62187109977629 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 POP4 ENSG00000105171 UTR3 Human protein_coding chr19:30106571 chr19:30106557 . . 0 hm6A_associated_SNPs_20157 0 0 1 3 30106549 30106568 mRNA hsa-miR-199a-5p POP4 miRanda miRanda
14034 chr19 30106557 30106557 1 + G A rs148905508 30106571 + 30106551 30106591 41 ACCGGGGTTAACACTGGTTGACTTGAATAGGATTATTCGAT ACCGGGATTAACACTGGTTGACTTGAATAGGATTATTCGAT < 41bp 1 0.689064450111855 1 0.725462257862091 experiment 0.62187109977629 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 POP4 ENSG00000105171 UTR3 Human protein_coding chr19:30106571 chr19:30106557 . . 0 hm6A_associated_SNPs_20157 0 0 1 3 30106547 30106568 mRNA hsa-miR-199b-5p POP4 miRanda miRanda
14034 chr19 30106557 30106557 1 + G A rs148905508 30106571 + 30106551 30106591 41 ACCGGGGTTAACACTGGTTGACTTGAATAGGATTATTCGAT ACCGGGATTAACACTGGTTGACTTGAATAGGATTATTCGAT < 41bp 1 0.689064450111855 1 0.725462257862091 experiment 0.62187109977629 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 POP4 ENSG00000105171 UTR3 Human protein_coding chr19:30106571 chr19:30106557 . . 0 hm6A_associated_SNPs_20157 0 0 1 3 30106554 30106575 mRNA hsa-miR-224 POP4 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315151 30315176 mRNA hsa-miR-15a CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315155 30315176 mRNA hsa-miR-16 CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315151 30315176 mRNA hsa-miR-15b CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315164 30315186 mRNA hsa-miR-185 CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315172 30315193 mRNA hsa-miR-186 CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315153 30315176 mRNA hsa-miR-195 CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315154 30315176 mRNA hsa-miR-424 CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315156 30315176 mRNA hsa-miR-497 CCNE1 miRanda miRanda
14034 chr19 30315176 30315176 1 + A G rs3218074 30315156 + 30315136 30315176 41 GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTA GTGTACAATGCCTTTGATGAACTGTTTTGTAAGTGCTGCTG < 41bp 1 0.600754173968408 1 0.944550156593323 experiment 0.798491652063184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30315156 chr19:30315176 . . 0 hm6A_associated_SNPs_20163 0 0 1 9 30315149 30315176 mRNA hsa-miR-503 CCNE1 miRanda miRanda
14034 chr19 30506306 30506306 1 + T A rs75998333 30506291 + 30506271 30506311 41 GCATTGTTTTTGTGTTTCAAACTAAATACAGGCAGTTTTGT GCATTGTTTTTGTGTTTCAAACTAAATACAGGCAGATTTGT < 41bp 1 0.390051648197817 1 0.927416980266571 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 URI1 ENSG00000105176 UTR3 Human protein_coding chr19:30506291 chr19:30506306 . . 0 hm6A_associated_SNPs_20167 0 0 1 2 30506300 30506323 mRNA hsa-miR-27a C19orf2 miRanda miRanda
14034 chr19 30506306 30506306 1 + T A rs75998333 30506291 + 30506271 30506311 41 GCATTGTTTTTGTGTTTCAAACTAAATACAGGCAGTTTTGT GCATTGTTTTTGTGTTTCAAACTAAATACAGGCAGATTTGT < 41bp 1 0.390051648197817 1 0.927416980266571 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 URI1 ENSG00000105176 UTR3 Human protein_coding chr19:30506291 chr19:30506306 . . 0 hm6A_associated_SNPs_20167 0 0 1 2 30506302 30506323 mRNA hsa-miR-27b C19orf2 miRanda miRanda
14034 chr19 30506355 30506355 1 + A C rs11555953 30506342 + 30506322 30506362 41 ATATTGTGCATACCATATGGACCATTTTAAAGAAAATTTTA ATATTGTGCATACCATATGGACCATTTTAAAGACAATTTTA < 41bp 1 0.237738086542051 1 0.984035551548004 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 URI1 ENSG00000105176 UTR3 Human protein_coding chr19:30506342 chr19:30506355 . . 0 hm6A_associated_SNPs_20168 0 0 1 3 30506350 30506371 mRNA hsa-miR-203 C19orf2 miRanda miRanda
14034 chr19 30506355 30506355 1 + A C rs11555953 30506342 + 30506322 30506362 41 ATATTGTGCATACCATATGGACCATTTTAAAGAAAATTTTA ATATTGTGCATACCATATGGACCATTTTAAAGACAATTTTA < 41bp 1 0.237738086542051 1 0.984035551548004 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 URI1 ENSG00000105176 UTR3 Human protein_coding chr19:30506342 chr19:30506355 . . 0 hm6A_associated_SNPs_20168 0 0 1 3 30506348 30506368 mRNA hsa-miR-590-3p C19orf2 miRanda miRanda
14034 chr19 30506355 30506355 1 + A C rs11555953 30506342 + 30506322 30506362 41 ATATTGTGCATACCATATGGACCATTTTAAAGAAAATTTTA ATATTGTGCATACCATATGGACCATTTTAAAGACAATTTTA < 41bp 1 0.237738086542051 1 0.984035551548004 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 URI1 ENSG00000105176 UTR3 Human protein_coding chr19:30506342 chr19:30506355 . . 0 hm6A_associated_SNPs_20168 0 0 1 3 30506340 30506360 mRNA hsa-miR-590-3p C19orf2 miRanda miRanda
14034 chr19 32876352 32876352 1 + T C rs75418191 32876360 + 32876340 32876380 41 TAACAATGTGTCTACCAAGAACAATTGAGTTTTCTAAAAGT TAACAATGTGTCCACCAAGAACAATTGAGTTTTCTAAAAGT < 41bp 1 0.402381441759201 1 0.0185511112213135 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 ZNF507 ENSG00000168813 UTR3 Human protein_coding chr19:32876360 chr19:32876352 . . 0 hm6A_associated_SNPs_20173 0 0 1 1 32876333 32876356 mRNA hsa-miR-379 ZNF507 miRanda miRanda
14034 chr19 32876818 32876818 1 + T C rs140856186 32876803 + 32876783 32876823 41 TGGTATTGACTTCTTATTAGACAGAGCTCATAGTATTTGTT TGGTATTGACTTCTTATTAGACAGAGCTCATAGTACTTGTT < 41bp 1 0.177273788353797 1 0.0240355730056763 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 ZNF507 ENSG00000168813 UTR3 Human protein_coding chr19:32876803 chr19:32876818 . . 0 hm6A_associated_SNPs_20174 0 0 1 1 32876812 32876833 mRNA hsa-miR-185 ZNF507 miRanda miRanda
14034 chr19 32876818 32876818 1 + T C rs140856186 32876835 + 32876815 32876855 41 GTATTTGTTTTCTGCTCCGAACACTTAAAAAATACTAAGAC GTACTTGTTTTCTGCTCCGAACACTTAAAAAATACTAAGAC < 41bp 1 0.239213517919075 1 0.0853123664855957 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 ZNF507 ENSG00000168813 UTR3 Human protein_coding chr19:32876835 chr19:32876818 . . 0 hm6A_associated_SNPs_20175 0 0 1 1 32876812 32876833 mRNA hsa-miR-185 ZNF507 miRanda miRanda
14034 chr19 32945905 32945905 1 + A G rs8105178 32945920 + 32945900 32945940 41 TATTTATGGTTTTATGTTTGACACTTTTTCTCAACAACATA TATTTGTGGTTTTATGTTTGACACTTTTTCTCAACAACATA < 41bp 1 0.508851040970774 1 0.145350426435471 experiment 0.982297918058451 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 6 DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32945920 chr19:32945905 nonsynonymous SNV 0.939 0 hm6A_associated_SNPs_20178 0 0 1 3 32945903 32945925 mRNA hsa-miR-130a DPY19L3 miRanda miRanda
14034 chr19 32945905 32945905 1 + A G rs8105178 32945920 + 32945900 32945940 41 TATTTATGGTTTTATGTTTGACACTTTTTCTCAACAACATA TATTTGTGGTTTTATGTTTGACACTTTTTCTCAACAACATA < 41bp 1 0.508851040970774 1 0.145350426435471 experiment 0.982297918058451 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 6 DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32945920 chr19:32945905 nonsynonymous SNV 0.939 0 hm6A_associated_SNPs_20178 0 0 1 3 32945903 32945925 mRNA hsa-miR-130b DPY19L3 miRanda miRanda
14034 chr19 32945905 32945905 1 + A G rs8105178 32945920 + 32945900 32945940 41 TATTTATGGTTTTATGTTTGACACTTTTTCTCAACAACATA TATTTGTGGTTTTATGTTTGACACTTTTTCTCAACAACATA < 41bp 1 0.508851040970774 1 0.145350426435471 experiment 0.982297918058451 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 6 DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32945920 chr19:32945905 nonsynonymous SNV 0.939 0 hm6A_associated_SNPs_20178 0 0 1 3 32945902 32945925 mRNA hsa-miR-301b DPY19L3 miRanda miRanda
14034 chr19 33795421 33795421 1 + C A rs180821724 33795410 + 33795390 33795430 41 CGGGAACTCTGCCCCGTAGGACTGGAAGAAACCTCAGTAAT CGGGAACTCTGCCCCGTAGGACTGGAAGAAAACTCAGTAAT < 41bp 1 0.51076869937721 1 0.955158829689026 experiment 0.97846260124558 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 32 CEBPA-AS1 ENSG00000178863;ENSG00000267296 ncRNA_exonic Human other chr19:33795410 chr19:33795421 . . 0 hm6A_associated_SNPs_20192 0 0 1 2 33795417 33795443 mRNA hsa-miR-21 LOC80054 miRanda miRanda
14034 chr19 33795421 33795421 1 + C A rs180821724 33795410 + 33795390 33795430 41 CGGGAACTCTGCCCCGTAGGACTGGAAGAAACCTCAGTAAT CGGGAACTCTGCCCCGTAGGACTGGAAGAAAACTCAGTAAT < 41bp 1 0.51076869937721 1 0.955158829689026 experiment 0.97846260124558 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 32 CEBPA-AS1 ENSG00000178863;ENSG00000267296 ncRNA_exonic Human other chr19:33795410 chr19:33795421 . . 0 hm6A_associated_SNPs_20192 0 0 1 2 33795421 33795443 mRNA hsa-miR-590-5p LOC80054 miRanda miRanda
14034 chr19 33871176 33871176 1 + T A rs553021965 33871195 + 33871175 33871215 41 ATGTCAGGTTAAGTAAAGAAACTTCATCACATCTTATAGGT AAGTCAGGTTAAGTAAAGAAACTTCATCACATCTTATAGGT < 41bp 1 0.426876462435321 1 0.0550682544708252 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 2 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33871195 chr19:33871176 . . 0 hm6A_associated_SNPs_20202 0 0 1 2 33871156 33871177 mRNA hsa-miR-32 CEBPG miRanda miRanda
14034 chr19 33871176 33871176 1 + T A rs553021965 33871195 + 33871175 33871215 41 ATGTCAGGTTAAGTAAAGAAACTTCATCACATCTTATAGGT AAGTCAGGTTAAGTAAAGAAACTTCATCACATCTTATAGGT < 41bp 1 0.426876462435321 1 0.0550682544708252 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 2 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33871195 chr19:33871176 . . 0 hm6A_associated_SNPs_20202 0 0 1 2 33871155 33871177 mRNA hsa-miR-367 CEBPG miRanda miRanda
14034 chr19 33872150 33872150 1 + G C rs117236383 33872152 + 33872132 33872172 41 CATTGCTGTTTCATACTAGGACTTGGGATGATGTAGCCAGA CATTGCTGTTTCATACTACGACTTGGGATGATGTAGCCAGA Direct Loss 1 0.286980173100162 1 0.35783913731575 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 19 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33872152 chr19:33872150 . . 0 hm6A_associated_SNPs_20204 0 0 1 2 33872149 33872169 mRNA hsa-miR-221 CEBPG miRanda miRanda
14034 chr19 33872150 33872150 1 + G C rs117236383 33872152 + 33872132 33872172 41 CATTGCTGTTTCATACTAGGACTTGGGATGATGTAGCCAGA CATTGCTGTTTCATACTACGACTTGGGATGATGTAGCCAGA Direct Loss 1 0.286980173100162 1 0.35783913731575 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 19 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33872152 chr19:33872150 . . 0 hm6A_associated_SNPs_20204 0 0 1 2 33872149 33872169 mRNA hsa-miR-222 CEBPG miRanda miRanda
14034 chr19 33873371 33873371 1 + C T rs76648333 33873358 + 33873338 33873378 41 GCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGT GCTTGAGACCTTGTACCTGAACAACCCATTTTGTACTCAGT < 41bp 1 0.572827003130562 1 0.0723934769630432 experiment 0.854345993738876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33873358 chr19:33873371 . . 0 hm6A_associated_SNPs_20207 0 0 1 7 33873352 33873374 mRNA hsa-miR-19a CEBPG miRanda miRanda
14034 chr19 33873371 33873371 1 + C T rs76648333 33873358 + 33873338 33873378 41 GCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGT GCTTGAGACCTTGTACCTGAACAACCCATTTTGTACTCAGT < 41bp 1 0.572827003130562 1 0.0723934769630432 experiment 0.854345993738876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33873358 chr19:33873371 . . 0 hm6A_associated_SNPs_20207 0 0 1 7 33873352 33873374 mRNA hsa-miR-19b CEBPG miRanda miRanda
14034 chr19 33873371 33873371 1 + C T rs76648333 33873358 + 33873338 33873378 41 GCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGT GCTTGAGACCTTGTACCTGAACAACCCATTTTGTACTCAGT < 41bp 1 0.572827003130562 1 0.0723934769630432 experiment 0.854345993738876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33873358 chr19:33873371 . . 0 hm6A_associated_SNPs_20207 0 0 1 7 33873354 33873375 mRNA hsa-miR-130a CEBPG miRanda miRanda
14034 chr19 33873371 33873371 1 + C T rs76648333 33873358 + 33873338 33873378 41 GCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGT GCTTGAGACCTTGTACCTGAACAACCCATTTTGTACTCAGT < 41bp 1 0.572827003130562 1 0.0723934769630432 experiment 0.854345993738876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33873358 chr19:33873371 . . 0 hm6A_associated_SNPs_20207 0 0 1 7 33873351 33873375 mRNA hsa-miR-301a CEBPG miRanda miRanda
14034 chr19 33873371 33873371 1 + C T rs76648333 33873358 + 33873338 33873378 41 GCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGT GCTTGAGACCTTGTACCTGAACAACCCATTTTGTACTCAGT < 41bp 1 0.572827003130562 1 0.0723934769630432 experiment 0.854345993738876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33873358 chr19:33873371 . . 0 hm6A_associated_SNPs_20207 0 0 1 7 33873355 33873375 mRNA hsa-miR-130b CEBPG miRanda miRanda
14034 chr19 33873371 33873371 1 + C T rs76648333 33873358 + 33873338 33873378 41 GCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGT GCTTGAGACCTTGTACCTGAACAACCCATTTTGTACTCAGT < 41bp 1 0.572827003130562 1 0.0723934769630432 experiment 0.854345993738876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33873358 chr19:33873371 . . 0 hm6A_associated_SNPs_20207 0 0 1 7 33873351 33873375 mRNA hsa-miR-454 CEBPG miRanda miRanda
14034 chr19 33873371 33873371 1 + C T rs76648333 33873358 + 33873338 33873378 41 GCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGT GCTTGAGACCTTGTACCTGAACAACCCATTTTGTACTCAGT < 41bp 1 0.572827003130562 1 0.0723934769630432 experiment 0.854345993738876 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33873358 chr19:33873371 . . 0 hm6A_associated_SNPs_20207 0 0 1 7 33873351 33873375 mRNA hsa-miR-301b CEBPG miRanda miRanda
14034 chr19 34304323 34304323 1 + C T rs560088861 34304316 + 34304296 34304336 41 TGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTA TGCAAAAGTCAGAGAGGCTGACAAGGATCAATGCTTCTTTA < 41bp 1 0.671926056945342 1 0.917233347892761 experiment 0.656147886109316 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304316 chr19:34304323 . . 0 hm6A_associated_SNPs_20208 0 0 1 3 34304322 34304346 mRNA hsa-miR-29b KCTD15 miRanda miRanda
14034 chr19 34304323 34304323 1 + C T rs560088861 34304316 + 34304296 34304336 41 TGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTA TGCAAAAGTCAGAGAGGCTGACAAGGATCAATGCTTCTTTA < 41bp 1 0.671926056945342 1 0.917233347892761 experiment 0.656147886109316 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304316 chr19:34304323 . . 0 hm6A_associated_SNPs_20208 0 0 1 3 34304306 34304327 mRNA hsa-miR-133a KCTD15 miRanda miRanda
14034 chr19 34304323 34304323 1 + C T rs560088861 34304316 + 34304296 34304336 41 TGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTA TGCAAAAGTCAGAGAGGCTGACAAGGATCAATGCTTCTTTA < 41bp 1 0.671926056945342 1 0.917233347892761 experiment 0.656147886109316 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304316 chr19:34304323 . . 0 hm6A_associated_SNPs_20208 0 0 1 3 34304306 34304327 mRNA hsa-miR-133b KCTD15 miRanda miRanda
14034 chr19 34304323 34304323 1 + C T rs560088861 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGATCAATGCTTCTTTATCTGGT Direct Loss 1 0.678617582538156 1 0.887247085571289 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 22 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304323 . . 0 hm6A_associated_SNPs_20209 0 0 1 3 34304322 34304346 mRNA hsa-miR-29b KCTD15 miRanda miRanda
14034 chr19 34304323 34304323 1 + C T rs560088861 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGATCAATGCTTCTTTATCTGGT Direct Loss 1 0.678617582538156 1 0.887247085571289 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 22 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304323 . . 0 hm6A_associated_SNPs_20209 0 0 1 3 34304306 34304327 mRNA hsa-miR-133a KCTD15 miRanda miRanda
14034 chr19 34304323 34304323 1 + C T rs560088861 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGATCAATGCTTCTTTATCTGGT Direct Loss 1 0.678617582538156 1 0.887247085571289 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 22 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304323 . . 0 hm6A_associated_SNPs_20209 0 0 1 3 34304306 34304327 mRNA hsa-miR-133b KCTD15 miRanda miRanda
14034 chr19 34304337 34304337 1 + T A rs186215058 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTAACTGGT < 41bp 1 0.691259064047576 1 0.955510020256042 experiment 0.617481871904848 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304337 . . 0 hm6A_associated_SNPs_20210 0 0 1 5 34304325 34304346 mRNA hsa-miR-29a KCTD15 miRanda miRanda
14034 chr19 34304337 34304337 1 + T A rs186215058 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTAACTGGT < 41bp 1 0.691259064047576 1 0.955510020256042 experiment 0.617481871904848 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304337 . . 0 hm6A_associated_SNPs_20210 0 0 1 5 34304322 34304346 mRNA hsa-miR-29b KCTD15 miRanda miRanda
14034 chr19 34304337 34304337 1 + T A rs186215058 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTAACTGGT < 41bp 1 0.691259064047576 1 0.955510020256042 experiment 0.617481871904848 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304337 . . 0 hm6A_associated_SNPs_20210 0 0 1 5 34304333 34304354 mRNA hsa-miR-146a KCTD15 miRanda miRanda
14034 chr19 34304337 34304337 1 + T A rs186215058 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTAACTGGT < 41bp 1 0.691259064047576 1 0.955510020256042 experiment 0.617481871904848 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304337 . . 0 hm6A_associated_SNPs_20210 0 0 1 5 34304325 34304346 mRNA hsa-miR-29c KCTD15 miRanda miRanda
14034 chr19 34304337 34304337 1 + T A rs186215058 34304322 + 34304302 34304342 41 AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGT AGTCAGAGAGGCTGACAAGGACCAATGCTTCTTTAACTGGT < 41bp 1 0.691259064047576 1 0.955510020256042 experiment 0.617481871904848 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304322 chr19:34304337 . . 0 hm6A_associated_SNPs_20210 0 0 1 5 34304333 34304354 mRNA hsa-miR-146b-5p KCTD15 miRanda miRanda
14034 chr19 36487146 36487146 1 + A G rs7925 36487153 + 36487133 36487173 41 GGTTTTGAGGGGCAACATTGACTCATTTGCCCCTTCCCTCT GGTTTTGAGGGGCGACATTGACTCATTTGCCCCTTCCCTCT < 41bp 1 0.698793891148408 1 0.910932183265686 experiment 0.602412217703183 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 SDHAF1 ENSG00000205138 UTR3 Human protein_coding chr19:36487153 chr19:36487146 . . 0 hm6A_associated_SNPs_20251 1 0 1 1 36487129 36487151 mRNA hsa-miR-455-5p SDHAF1 miRanda miRanda
14034 chr19 36728901 36728901 1 + C T rs538542124 36728881 + 36728861 36728901 41 ATAGGGAAACATTCCTTGGAACAATTTGAGAAATACTTAGC ATAGGGAAACATTCCTTGGAACAATTTGAGAAATACTTAGT < 41bp 1 0.688471507036224 1 0.660999894142151 experiment 0.623056985927551 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 ZNF146 ENSG00000167635 UTR3 Human protein_coding chr19:36728881 chr19:36728901 . . 0 hm6A_associated_SNPs_20258 0 0 1 1 36728892 36728911 mRNA hsa-miR-411 ZNF146 miRanda miRanda
14034 chr19 36729007 36729007 1 + G A rs112406709 36729009 + 36728989 36729029 41 ACTGAGAAAGCCCATCACGAACAATATGGGAAATTCTTATG ACTGAGAAAGCCCATCACAAACAATATGGGAAATTCTTATG < 41bp 1 0.586024518920185 1 0.723069548606873 experiment 0.82795096215963 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 ZNF146 ENSG00000167635 UTR3 Human protein_coding chr19:36729009 chr19:36729007 . . 0 hm6A_associated_SNPs_20259 0 0 1 1 36728990 36729013 mRNA hsa-miR-375 ZNF146 miRanda miRanda
14034 chr19 39398631 39398631 1 + A G rs3136644 39398625 + 39398605 39398645 41 TAGGCAGCAAGAATTGGAGAACTCACACTGCGAAAAGAAAA TAGGCAGCAAGAATTGGAGAACTCACGCTGCGAAAAGAAAA < 41bp 1 0.760361155826075 1 0.617753446102142 experiment 0.47927768834785 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 NFKBIB ENSG00000104825 UTR3 Human protein_coding chr19:39398625 chr19:39398631 . . 0 hm6A_associated_SNPs_20307 0 0 1 1 39398614 39398635 mRNA hsa-miR-125a-3p NFKBIB miRanda miRanda
14034 chr19 39967108 39967108 1 + G C rs140497447 39967109 + 39967089 39967129 41 TTCCCTGGCCCTTGGCTGTGACACAAGATCCTCCTGCAGGG TTCCCTGGCCCTTGGCTGTCACACAAGATCCTCCTGCAGGG Direct Loss 1 0.409784355247601 1 0.649732410907745 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 SUPT5H ENSG00000196235 UTR3 Human protein_coding chr19:39967109 chr19:39967108 . . 0 hm6A_associated_SNPs_20330 0 0 1 1 39967096 39967115 mRNA hsa-miR-599 SUPT5H miRanda miRanda
14034 chr19 41097189 41097189 1 + C T rs191330922 41097188 + 41097168 41097208 41 CCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGGG CCTCCCTGATTCCTGTGGGAATCCCGGGTTCAGGGCCAGGG Direct Loss 1 0.315759238927817 1 0.756034195423126 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 SHKBP1 ENSG00000160410 UTR3 Human protein_coding chr19:41097188 chr19:41097189 . . 0 hm6A_associated_SNPs_20338 0 0 1 1 41097183 41097206 mRNA hsa-miR-328 SHKBP1 miRanda miRanda
14034 chr19 44516294 44516294 1 + C T rs60620675 44516291 + 44516271 44516311 41 TCTTATGCCTCAGAGGCTTGACACAAGAGCAAAACTATGGA TCTTATGCCTCAGAGGCTTGACATAAGAGCAAAACTATGGA < 41bp 1 0.101080490437552 1 0.01022008061409 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 ZNF230 ENSG00000159882 UTR3 Human protein_coding chr19:44516291 chr19:44516294 . . 0 hm6A_associated_SNPs_20389 0 0 0 1 44516277 44516297 mRNA hsa-miR-599 ZNF230 miRanda miRanda
14034 chr19 44679774 44679774 1 + A G rs148831920 44679793 + 44679773 44679813 41 AATAATTCTCAGTGTCACAAACAAGGTGATTTCCCTTACCA AGTAATTCTCAGTGTCACAAACAAGGTGATTTCCCTTACCA < 41bp 1 0.570061693713436 1 0.377854287624359 experiment 0.859876612573129 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 2 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679793 chr19:44679774 nonsynonymous SNV 0.282 0 hm6A_associated_SNPs_20401 0 0 1 1 44679771 44679793 mRNA hsa-miR-758 ZNF226 miRanda miRanda
14034 chr19 44741117 44741117 1 + A G rs115121913 44741114 + 44741094 44741134 41 TCACACTTGGAATCTTTCTAACAAATCCATCAAGATGATAA TCACACTTGGAATCTTTCTAACAGATCCATCAAGATGATAA < 41bp 1 0.449395542679726 1 0.940117239952087 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 ZNF227 ENSG00000131115 UTR3 Human protein_coding chr19:44741114 chr19:44741117 . . 0 hm6A_associated_SNPs_20402 0 0 1 1 44741100 44741122 mRNA hsa-miR-876-5p ZNF227 miRanda miRanda
14034 chr19 45381970 45381970 1 + G A rs139717042 45381953 + 45381933 45381973 41 ACGCCGGCCTAGGGTTCCAGACTGGTTGGACTTGTTCGTCT ACGCCGGCCTAGGGTTCCAGACTGGTTGGACTTGTTCATCT < 41bp 1 0.732227898332255 1 0.993386745452881 experiment 0.53554420333549 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 38 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381953 chr19:45381970 . . 0 hm6A_associated_SNPs_20426 0 0 1 2 45381961 45381986 mRNA hsa-miR-199a-5p PVRL2 miRanda miRanda
14034 chr19 45381970 45381970 1 + G A rs139717042 45381953 + 45381933 45381973 41 ACGCCGGCCTAGGGTTCCAGACTGGTTGGACTTGTTCGTCT ACGCCGGCCTAGGGTTCCAGACTGGTTGGACTTGTTCATCT < 41bp 1 0.732227898332255 1 0.993386745452881 experiment 0.53554420333549 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;Control 38 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381953 chr19:45381970 . . 0 hm6A_associated_SNPs_20426 0 0 1 2 45381961 45381986 mRNA hsa-miR-199b-5p PVRL2 miRanda miRanda
14034 chr19 45381970 45381970 1 + G A rs139717042 45381962 + 45381942 45381982 41 TAGGGTTCCAGACTGGTTGGACTTGTTCGTCTGGACGACAC TAGGGTTCCAGACTGGTTGGACTTGTTCATCTGGACGACAC < 41bp 1 0.740622514737303 1 0.99732518196106 experiment 0.518754970525393 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381962 chr19:45381970 . . 0 hm6A_associated_SNPs_20427 0 0 1 2 45381961 45381986 mRNA hsa-miR-199a-5p PVRL2 miRanda miRanda
14034 chr19 45381970 45381970 1 + G A rs139717042 45381962 + 45381942 45381982 41 TAGGGTTCCAGACTGGTTGGACTTGTTCGTCTGGACGACAC TAGGGTTCCAGACTGGTTGGACTTGTTCATCTGGACGACAC < 41bp 1 0.740622514737303 1 0.99732518196106 experiment 0.518754970525393 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381962 chr19:45381970 . . 0 hm6A_associated_SNPs_20427 0 0 1 2 45381961 45381986 mRNA hsa-miR-199b-5p PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45381992 + 45381972 45382012 41 CTGGACGACACTGGAGTGGAACACTGCCTCCCACTTTCTTG CTGGACGACACTGGAGTGGAACACTGCTTCCCACTTTCTTG < 41bp 1 0.488461923265034 1 0.984806835651398 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381992 chr19:45381999 . . 0 hm6A_associated_SNPs_20428 0 0 1 4 45381978 45382000 mRNA hsa-miR-34a PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45381992 + 45381972 45382012 41 CTGGACGACACTGGAGTGGAACACTGCCTCCCACTTTCTTG CTGGACGACACTGGAGTGGAACACTGCTTCCCACTTTCTTG < 41bp 1 0.488461923265034 1 0.984806835651398 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381992 chr19:45381999 . . 0 hm6A_associated_SNPs_20428 0 0 1 4 45381980 45382000 mRNA hsa-miR-34c-5p PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45381992 + 45381972 45382012 41 CTGGACGACACTGGAGTGGAACACTGCCTCCCACTTTCTTG CTGGACGACACTGGAGTGGAACACTGCTTCCCACTTTCTTG < 41bp 1 0.488461923265034 1 0.984806835651398 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381992 chr19:45381999 . . 0 hm6A_associated_SNPs_20428 0 0 1 4 45381979 45382000 mRNA hsa-miR-449a PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45381992 + 45381972 45382012 41 CTGGACGACACTGGAGTGGAACACTGCCTCCCACTTTCTTG CTGGACGACACTGGAGTGGAACACTGCTTCCCACTTTCTTG < 41bp 1 0.488461923265034 1 0.984806835651398 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45381992 chr19:45381999 . . 0 hm6A_associated_SNPs_20428 0 0 1 4 45381979 45382000 mRNA hsa-miR-449b PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45382015 + 45381995 45382035 41 CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG CTGCTTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG < 41bp 1 0.744830187027192 1 0.982216358184814 experiment 0.510339625945615 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382015 chr19:45381999 . . 0 hm6A_associated_SNPs_20429 0 0 1 4 45381978 45382000 mRNA hsa-miR-34a PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45382015 + 45381995 45382035 41 CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG CTGCTTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG < 41bp 1 0.744830187027192 1 0.982216358184814 experiment 0.510339625945615 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382015 chr19:45381999 . . 0 hm6A_associated_SNPs_20429 0 0 1 4 45381980 45382000 mRNA hsa-miR-34c-5p PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45382015 + 45381995 45382035 41 CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG CTGCTTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG < 41bp 1 0.744830187027192 1 0.982216358184814 experiment 0.510339625945615 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382015 chr19:45381999 . . 0 hm6A_associated_SNPs_20429 0 0 1 4 45381979 45382000 mRNA hsa-miR-449a PVRL2 miRanda miRanda
14034 chr19 45381999 45381999 1 + C T rs144458572 45382015 + 45381995 45382035 41 CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG CTGCTTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG < 41bp 1 0.744830187027192 1 0.982216358184814 experiment 0.510339625945615 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382015 chr19:45381999 . . 0 hm6A_associated_SNPs_20429 0 0 1 4 45381979 45382000 mRNA hsa-miR-449b PVRL2 miRanda miRanda
14034 chr19 45382034 45382034 1 + A G rs6859 45382015 + 45381995 45382035 41 CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACGG < 41bp 1 0.713893695122259 1 0.981508553028107 experiment 0.572212609755481 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 40 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382015 chr19:45382034 . . 0 hm6A_associated_SNPs_20430 0 1 1 2 45382021 45382044 mRNA hsa-miR-199a-5p PVRL2 miRanda miRanda
14034 chr19 45382034 45382034 1 + A G rs6859 45382015 + 45381995 45382035 41 CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACAG CTGCCTCCCACTTTCTTGGGACTTGGAGGGAGGTGGAACGG < 41bp 1 0.713893695122259 1 0.981508553028107 experiment 0.572212609755481 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 40 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382015 chr19:45382034 . . 0 hm6A_associated_SNPs_20430 0 1 1 2 45382021 45382044 mRNA hsa-miR-199b-5p PVRL2 miRanda miRanda
14034 chr19 45382034 45382034 1 + A G rs6859 45382032 + 45382012 45382052 41 GGGACTTGGAGGGAGGTGGAACAGCACACTGGACTTCTCCC GGGACTTGGAGGGAGGTGGAACGGCACACTGGACTTCTCCC Direct Loss 1 0.464574992933463 1 0.982277393341064 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382032 chr19:45382034 . . 0 hm6A_associated_SNPs_20431 0 1 1 2 45382021 45382044 mRNA hsa-miR-199a-5p PVRL2 miRanda miRanda
14034 chr19 45382034 45382034 1 + A G rs6859 45382032 + 45382012 45382052 41 GGGACTTGGAGGGAGGTGGAACAGCACACTGGACTTCTCCC GGGACTTGGAGGGAGGTGGAACGGCACACTGGACTTCTCCC Direct Loss 1 0.464574992933463 1 0.982277393341064 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382032 chr19:45382034 . . 0 hm6A_associated_SNPs_20431 0 1 1 2 45382021 45382044 mRNA hsa-miR-199b-5p PVRL2 miRanda miRanda
14034 chr19 45382034 45382034 1 + A G rs6859 45382044 + 45382024 45382064 41 GAGGTGGAACAGCACACTGGACTTCTCCCGTCTCTAGGGCT GAGGTGGAACGGCACACTGGACTTCTCCCGTCTCTAGGGCT < 41bp 1 0.749802732414704 1 0.973597645759583 experiment 0.500394535170591 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382044 chr19:45382034 . . 0 hm6A_associated_SNPs_20432 0 1 1 2 45382021 45382044 mRNA hsa-miR-199a-5p PVRL2 miRanda miRanda
14034 chr19 45382034 45382034 1 + A G rs6859 45382044 + 45382024 45382064 41 GAGGTGGAACAGCACACTGGACTTCTCCCGTCTCTAGGGCT GAGGTGGAACGGCACACTGGACTTCTCCCGTCTCTAGGGCT < 41bp 1 0.749802732414704 1 0.973597645759583 experiment 0.500394535170591 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 NECTIN2 ENSG00000130202 UTR3 Human protein_coding chr19:45382044 chr19:45382034 . . 0 hm6A_associated_SNPs_20432 0 1 1 2 45382021 45382044 mRNA hsa-miR-199b-5p PVRL2 miRanda miRanda
14034 chr19 45406608 45406608 1 + C T rs567617672 45406599 + 45406579 45406619 41 GCTGAGGAGGGGATTCTGGAACTGAATGGCGCTTCGGGATT GCTGAGGAGGGGATTCTGGAACTGAATGGTGCTTCGGGATT < 41bp 1 0.487688037643949 1 0.981613516807556 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 TOMM40 ENSG00000130204 UTR3 Human protein_coding chr19:45406599 chr19:45406608 . . 0 hm6A_associated_SNPs_20434 0 0 1 1 45406605 45406627 mRNA hsa-miR-361-5p TOMM40 miRanda miRanda
14034 chr19 45406613 45406613 1 + C A rs150051713 45406599 + 45406579 45406619 41 GCTGAGGAGGGGATTCTGGAACTGAATGGCGCTTCGGGATT GCTGAGGAGGGGATTCTGGAACTGAATGGCGCTTAGGGATT < 41bp 1 0.535001382799445 1 0.970104694366455 experiment 0.929997234401109 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TOMM40 ENSG00000130204 UTR3 Human protein_coding chr19:45406599 chr19:45406613 . . 0 hm6A_associated_SNPs_20435 0 0 1 1 45406605 45406627 mRNA hsa-miR-361-5p TOMM40 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45649999 45650021 mRNA hsa-miR-302a LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45649999 45650021 mRNA hsa-miR-302b LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45649999 45650021 mRNA hsa-miR-302c LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45649995 45650021 mRNA hsa-miR-302d LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45649998 45650021 mRNA hsa-miR-372 LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45649999 45650021 mRNA hsa-miR-373 LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45650001 45650021 mRNA hsa-miR-520e LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45650000 45650021 mRNA hsa-miR-520a-3p LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45650001 45650021 mRNA hsa-miR-520b LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45650000 45650021 mRNA hsa-miR-520c-3p LRRC68 miRanda miRanda
14034 chr19 45650001 45650001 1 + C T rs28719739 45650009 + 45649989 45650029 41 GGAGTGGCCCTCCGCGCGTGACTCAAGCACTTCTATTTATG GGAGTGGCCCTCTGCGCGTGACTCAAGCACTTCTATTTATG < 41bp 1 0.727628309791829 1 0.860695838928223 experiment 0.544743380416342 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 13 PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650009 chr19:45650001 . . 0 hm6A_associated_SNPs_20439 0 0 1 11 45650000 45650021 mRNA hsa-miR-520d-3p LRRC68 miRanda miRanda
14034 chr19 46893958 46893958 1 + G A rs10426889 46893962 + 46893942 46893982 41 TAGGGCCCCGCCATAGGAAGACCCCCAGAGAGAGGGTCAGC TAGGGCCCCGCCATAGAAAGACCCCCAGAGAGAGGGTCAGC < 41bp 1 0.227868769932579 1 0.0388242602348328 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 17 PPP5C ENSG00000269151 ncRNA_intronic Human antisense chr19:46893962 chr19:46893958 . . 0 hm6A_associated_SNPs_20452 0 0 1 2 46893952 46893972 mRNA hsa-miR-330-5p PPP5C miRanda miRanda
14034 chr19 46893958 46893958 1 + G A rs10426889 46893962 + 46893942 46893982 41 TAGGGCCCCGCCATAGGAAGACCCCCAGAGAGAGGGTCAGC TAGGGCCCCGCCATAGAAAGACCCCCAGAGAGAGGGTCAGC < 41bp 1 0.227868769932579 1 0.0388242602348328 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 17 PPP5C ENSG00000269151 ncRNA_intronic Human antisense chr19:46893962 chr19:46893958 . . 0 hm6A_associated_SNPs_20452 0 0 1 2 46893952 46893972 mRNA hsa-miR-326 PPP5C miRanda miRanda
14034 chr19 47113160 47113160 1 + G A rs112684696 47113144 + 47113124 47113164 41 TTGGCCACTCTGCAAATTGGACTTGCCCGCGTTCCTGAAGC TTGGCCACTCTGCAAATTGGACTTGCCCGCGTTCCTAAAGC < 41bp 1 0.583173289600211 1 0.955592155456543 experiment 0.833653420799578 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 37 CALM3 ENSG00000269292 ncRNA_intronic Human antisense chr19:47113144 chr19:47113160 . . 0 hm6A_associated_SNPs_20464 0 0 1 1 47113139 47113161 mRNA hsa-miR-873 CALM3 miRanda miRanda
14034 chr19 47113179 47113179 1 + C A rs560525172 47113198 + 47113178 47113218 41 TCTGTAAATACCTGGTGCTAACATCCCATGCCGCTCCCTCC TATGTAAATACCTGGTGCTAACATCCCATGCCGCTCCCTCC < 41bp 1 0.515133652416797 1 0.804914593696594 experiment 0.969732695166406 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 2 CALM3 ENSG00000269292 ncRNA_intronic Human antisense chr19:47113198 chr19:47113179 . . 0 hm6A_associated_SNPs_20465 0 0 1 3 47113176 47113197 mRNA hsa-miR-29a CALM3 miRanda miRanda
14034 chr19 47113179 47113179 1 + C A rs560525172 47113198 + 47113178 47113218 41 TCTGTAAATACCTGGTGCTAACATCCCATGCCGCTCCCTCC TATGTAAATACCTGGTGCTAACATCCCATGCCGCTCCCTCC < 41bp 1 0.515133652416797 1 0.804914593696594 experiment 0.969732695166406 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 2 CALM3 ENSG00000269292 ncRNA_intronic Human antisense chr19:47113198 chr19:47113179 . . 0 hm6A_associated_SNPs_20465 0 0 1 3 47113170 47113197 mRNA hsa-miR-29b CALM3 miRanda miRanda
14034 chr19 47113179 47113179 1 + C A rs560525172 47113198 + 47113178 47113218 41 TCTGTAAATACCTGGTGCTAACATCCCATGCCGCTCCCTCC TATGTAAATACCTGGTGCTAACATCCCATGCCGCTCCCTCC < 41bp 1 0.515133652416797 1 0.804914593696594 experiment 0.969732695166406 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 2 CALM3 ENSG00000269292 ncRNA_intronic Human antisense chr19:47113198 chr19:47113179 . . 0 hm6A_associated_SNPs_20465 0 0 1 3 47113171 47113197 mRNA hsa-miR-29c CALM3 miRanda miRanda
14034 chr19 47113807 47113807 1 + T C rs545083458 47113794 + 47113774 47113814 41 ATCAAGTGGCTTTTCCTGGGACCTGCCCAGCTTTGAGAATC ATCAAGTGGCTTTTCCTGGGACCTGCCCAGCTTCGAGAATC < 41bp 1 0.287328124981575 1 0.76030433177948 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 CALM3 ENSG00000269292 ncRNA_intronic Human antisense chr19:47113794 chr19:47113807 . . 0 hm6A_associated_SNPs_20466 0 0 1 1 47113791 47113811 mRNA hsa-miR-371-5p CALM3 miRanda miRanda
14034 chr19 48258772 48258772 1 + G A rs11083895 48258753 + 48258733 48258773 41 GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGC GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGAC < 41bp 1 0.435014300465799 1 0.506800651550293 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 NOP53 ENSG00000105373 CDS Human protein_coding chr19:48258753 chr19:48258772 synonymous SNV . 0 hm6A_associated_SNPs_20488 0 0 0 2 48258768 48258780 mRNA hsa-miR-378 GLTSCR2 miRanda miRanda
14034 chr19 48258772 48258772 1 + G A rs11083895 48258753 + 48258733 48258773 41 GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGC GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGAC < 41bp 1 0.435014300465799 1 0.506800651550293 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 NOP53 ENSG00000105373 CDS Human protein_coding chr19:48258753 chr19:48258772 synonymous SNV . 0 hm6A_associated_SNPs_20488 0 0 0 2 48258766 48258780 mRNA hsa-miR-486-5p GLTSCR2 miRanda miRanda
14034 chr19 48258773 48258773 1 + C T rs563743000 48258753 + 48258733 48258773 41 GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGC GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGT < 41bp 1 0.442615613594113 1 0.395638406276703 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 NOP53 ENSG00000105373 CDS Human protein_coding chr19:48258753 chr19:48258773 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_20489 0 0 0 2 48258768 48258780 mRNA hsa-miR-378 GLTSCR2 miRanda miRanda
14034 chr19 48258773 48258773 1 + C T rs563743000 48258753 + 48258733 48258773 41 GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGC GCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGT < 41bp 1 0.442615613594113 1 0.395638406276703 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 NOP53 ENSG00000105373 CDS Human protein_coding chr19:48258753 chr19:48258773 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_20489 0 0 0 2 48258766 48258780 mRNA hsa-miR-486-5p GLTSCR2 miRanda miRanda
14034 chr19 49426396 49426396 1 + C G rs12463009 49426384 + 49426364 49426404 41 AGAGCTGACCCCACTCCAGGACCTAGGCCCAGCCCCTCAGC AGAGCTGACCCCACTCCAGGACCTAGGCCCAGGCCCTCAGC < 41bp 1 0.463447557621033 1 0.947301387786865 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 NUCB1 ENSG00000104805 UTR3 Human protein_coding chr19:49426384 chr19:49426396 . . 0 hm6A_associated_SNPs_20527 0 0 1 1 49426388 49426408 mRNA hsa-miR-485-5p NUCB1 miRanda miRanda
14034 chr19 49464363 49464363 1 + C G rs4645900 49464382 + 49464362 49464402 41 CCGATTCATCTACCCTGCTGACCTCCCAGTGACCCCTGACC CGGATTCATCTACCCTGCTGACCTCCCAGTGACCCCTGACC < 41bp 1 0.0398875808693654 1 0.63858437538147 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 BAX ENSG00000087088 UTR3 Human protein_coding chr19:49464382 chr19:49464363 . . 0 hm6A_associated_SNPs_20528 0 0 1 1 49464361 49464382 mRNA hsa-miR-214 BAX miRanda miRanda
14034 chr19 49464364 49464364 1 + G A rs552694023 49464382 + 49464362 49464402 41 CCGATTCATCTACCCTGCTGACCTCCCAGTGACCCCTGACC CCAATTCATCTACCCTGCTGACCTCCCAGTGACCCCTGACC < 41bp 1 0.0403083532362452 1 0.321739137172699 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 BAX ENSG00000087088 UTR3 Human protein_coding chr19:49464382 chr19:49464364 . . 0 hm6A_associated_SNPs_20529 0 0 1 1 49464361 49464382 mRNA hsa-miR-214 BAX miRanda miRanda
14034 chr19 49973932 49973932 1 + G A rs185956534 49973927 + 49973907 49973947 41 TTTTTTTTTTTTTTTTTGAGACAACGTCTGGCTCTGTCACC TTTTTTTTTTTTTTTTTGAGACAACATCTGGCTCTGTCACC < 41bp 1 0.486214694609386 1 0.350718647241592 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 26 ALDH16A1 ENSG00000161618 UTR3 Human protein_coding chr19:49973927 chr19:49973932 . . 0 hm6A_associated_SNPs_20539 0 0 1 1 49973926 49973947 mRNA hsa-miR-542-3p ALDH16A1 miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995400 49995422 mRNA hsa-miR-302a RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995400 49995422 mRNA hsa-miR-302b RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995400 49995422 mRNA hsa-miR-302c RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995400 49995422 mRNA hsa-miR-302d RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995400 49995422 mRNA hsa-miR-372 RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995398 49995422 mRNA hsa-miR-373 RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995400 49995422 mRNA hsa-miR-520e RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995399 49995422 mRNA hsa-miR-520a-3p RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995398 49995422 mRNA hsa-miR-520b RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995398 49995422 mRNA hsa-miR-520c-3p RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995400 49995422 mRNA hsa-miR-520d-3p RPL13A miRanda miRanda
14034 chr19 49995420 49995420 1 + T C rs537341906 49995426 + 49995406 49995446 41 GAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGT GAATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGT < 41bp 1 0.50715575194381 1 0.356566369533539 experiment 0.985688496112381 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995426 chr19:49995420 . . 0 hm6A_associated_SNPs_20549 0 0 1 12 49995406 49995422 mRNA hsa-miR-302e RPL13A miRanda miRanda
14034 chr19 50028152 50028152 1 + C A rs561261378 50028148 + 50028128 50028168 41 CTGCCACCTCCTTGAATCTGACTGCCTTGAACCTCACGCCT CTGCCACCTCCTTGAATCTGACTGACTTGAACCTCACGCCT < 41bp 1 0.190270037366019 1 0.993022084236145 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 25 FCGRT ENSG00000104870 UTR3 Human protein_coding chr19:50028148 chr19:50028152 . . 0 hm6A_associated_SNPs_20555 0 0 1 1 50028147 50028170 mRNA hsa-miR-125a-3p FCGRT miRanda miRanda
14034 chr19 50028163 50028163 1 + A G rs1132990 50028148 + 50028128 50028168 41 CTGCCACCTCCTTGAATCTGACTGCCTTGAACCTCACGCCT CTGCCACCTCCTTGAATCTGACTGCCTTGAACCTCGCGCCT < 41bp 1 0.149052582164394 1 0.987453818321228 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 36 FCGRT ENSG00000104870 UTR3 Human protein_coding chr19:50028148 chr19:50028163 . . 0 hm6A_associated_SNPs_20556 0 0 1 1 50028147 50028170 mRNA hsa-miR-125a-3p FCGRT miRanda miRanda
14034 chr19 50028165 50028165 1 + G A rs536968867 50028148 + 50028128 50028168 41 CTGCCACCTCCTTGAATCTGACTGCCTTGAACCTCACGCCT CTGCCACCTCCTTGAATCTGACTGCCTTGAACCTCACACCT < 41bp 1 0.151762955110648 1 0.986468911170959 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 38 FCGRT ENSG00000104870 UTR3 Human protein_coding chr19:50028148 chr19:50028165 . . 0 hm6A_associated_SNPs_20557 0 0 1 1 50028147 50028170 mRNA hsa-miR-125a-3p FCGRT miRanda miRanda
14034 chr19 50189442 50189442 1 + G C rs142242594 50189426 + 50189406 50189446 41 CCTGCAAGTGAAGCGGAATGACTACGTGCACGCCCTGGTGG CCTGCAAGTGAAGCGGAATGACTACGTGCACGCCCTCGTGG < 41bp 1 0.432698986152988 1 0.924417853355408 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50189426 chr19:50189442 synonymous SNV . 0 hm6A_associated_SNPs_20580 0 0 1 1 50189438 50189459 mRNA hsa-miR-653 PRMT1 miRanda miRanda
14034 chr19 50436952 50436952 1 + A G rs529007673 50436950 + 50436930 50436970 41 GCAGGCTAGGTGACCTTGGGACACTACGCTAAGGGAGGGAG GCAGGCTAGGTGACCTTGGGACGCTACGCTAAGGGAGGGAG Direct Loss 1 0.700053365442244 1 0.125365316867828 experiment 1 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 23 ATF5 ENSG00000169136 UTR3 Human protein_coding chr19:50436950 chr19:50436952 . . 0 hm6A_associated_SNPs_20590 0 0 1 1 50436938 50436960 mRNA hsa-miR-196b ATF5 miRanda miRanda
14034 chr19 50813348 50813348 1 + C T rs529409417 50813364 + 50813344 50813384 41 CCCTCGTTATTGATCTATAGACATTAGGAAGGGAGTGAGAC CCCTTGTTATTGATCTATAGACATTAGGAAGGGAGTGAGAC < 41bp 1 0.540606493623709 1 0.12646958231926 experiment 0.918787012752581 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 MYH14 ENSG00000267815 ncRNA_exonic Human antisense chr19:50813364 chr19:50813348 . . 0 hm6A_associated_SNPs_20599 1 0 0 1 50813342 50813370 mRNA hsa-miR-155 MYH14 miRanda miRanda
14034 chr19 50813349 50813349 1 + G A rs544178350 50813364 + 50813344 50813384 41 CCCTCGTTATTGATCTATAGACATTAGGAAGGGAGTGAGAC CCCTCATTATTGATCTATAGACATTAGGAAGGGAGTGAGAC < 41bp 1 0.495192926565051 1 0.110755681991577 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 6 MYH14 ENSG00000267815 ncRNA_exonic Human antisense chr19:50813364 chr19:50813349 . . 0 hm6A_associated_SNPs_20600 1 0 0 1 50813342 50813370 mRNA hsa-miR-155 MYH14 miRanda miRanda
14034 chr19 50986377 50986377 1 + C T rs544151207 50986373 + 50986353 50986393 41 CCCTGTAAGTCTATTTAAAAACATCGACGATACATTGAAAT CCCTGTAAGTCTATTTAAAAACATTGACGATACATTGAAAT < 41bp 1 0.634362758228836 1 0.913056075572968 experiment 0.731274483542327 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 EMC10 ENSG00000268854 ncRNA_exonic Human antisense chr19:50986373 chr19:50986377 . . 0 hm6A_associated_SNPs_20601 0 0 1 4 50986374 50986396 mRNA hsa-miR-181a C19orf63 miRanda miRanda
14034 chr19 50986377 50986377 1 + C T rs544151207 50986373 + 50986353 50986393 41 CCCTGTAAGTCTATTTAAAAACATCGACGATACATTGAAAT CCCTGTAAGTCTATTTAAAAACATTGACGATACATTGAAAT < 41bp 1 0.634362758228836 1 0.913056075572968 experiment 0.731274483542327 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 EMC10 ENSG00000268854 ncRNA_exonic Human antisense chr19:50986373 chr19:50986377 . . 0 hm6A_associated_SNPs_20601 0 0 1 4 50986371 50986396 mRNA hsa-miR-181b C19orf63 miRanda miRanda
14034 chr19 50986377 50986377 1 + C T rs544151207 50986373 + 50986353 50986393 41 CCCTGTAAGTCTATTTAAAAACATCGACGATACATTGAAAT CCCTGTAAGTCTATTTAAAAACATTGACGATACATTGAAAT < 41bp 1 0.634362758228836 1 0.913056075572968 experiment 0.731274483542327 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 EMC10 ENSG00000268854 ncRNA_exonic Human antisense chr19:50986373 chr19:50986377 . . 0 hm6A_associated_SNPs_20601 0 0 1 4 50986374 50986396 mRNA hsa-miR-181c C19orf63 miRanda miRanda
14034 chr19 50986377 50986377 1 + C T rs544151207 50986373 + 50986353 50986393 41 CCCTGTAAGTCTATTTAAAAACATCGACGATACATTGAAAT CCCTGTAAGTCTATTTAAAAACATTGACGATACATTGAAAT < 41bp 1 0.634362758228836 1 0.913056075572968 experiment 0.731274483542327 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 EMC10 ENSG00000268854 ncRNA_exonic Human antisense chr19:50986373 chr19:50986377 . . 0 hm6A_associated_SNPs_20601 0 0 1 4 50986371 50986396 mRNA hsa-miR-181d C19orf63 miRanda miRanda
14034 chr19 52729309 52729309 1 + T C rs369880957 52729305 + 52729285 52729325 41 ACAAGTCCCTCTTTGGGGAGACACTGGGGGGCCTTTGGCTG ACAAGTCCCTCTTTGGGGAGACACCGGGGGGCCTTTGGCTG < 41bp 1 0.658985736051752 1 0.084164559841156 experiment 0.682028527896496 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 PPP2R1A ENSG00000268015 ncRNA_intronic Human antisense chr19:52729305 chr19:52729309 . . 0 hm6A_associated_SNPs_20606 0 0 1 1 52729309 52729330 mRNA hsa-miR-542-3p PPP2R1A miRanda miRanda
14034 chr19 52920020 52920020 1 + C G rs139707958 52920018 + 52919998 52920038 41 CCTACAAACTGTATGGCAAAACCATCATCATGAGTTCTAGC CCTACAAACTGTATGGCAAAACGATCATCATGAGTTCTAGC Direct Loss 1 0.0672900832636204 1 0.963588237762451 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 ZNF528 ENSG00000167555 UTR3 Human protein_coding chr19:52920018 chr19:52920020 . . 0 hm6A_associated_SNPs_20618 0 0 0 2 52920017 52920043 mRNA hsa-miR-155 ZNF528 miRanda miRanda
14034 chr19 52920020 52920020 1 + C G rs139707958 52920018 + 52919998 52920038 41 CCTACAAACTGTATGGCAAAACCATCATCATGAGTTCTAGC CCTACAAACTGTATGGCAAAACGATCATCATGAGTTCTAGC Direct Loss 1 0.0672900832636204 1 0.963588237762451 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 ZNF528 ENSG00000167555 UTR3 Human protein_coding chr19:52920018 chr19:52920020 . . 0 hm6A_associated_SNPs_20618 0 0 0 2 52920010 52920031 mRNA hsa-miR-433 ZNF528 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859453 mRNA hsa-miR-17 SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859453 mRNA hsa-miR-20a SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859454 mRNA hsa-miR-26a SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859433 55859454 mRNA hsa-miR-26b SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859453 mRNA hsa-miR-93 SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859453 mRNA hsa-miR-106a SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859434 55859453 mRNA hsa-miR-106b SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859430 55859452 mRNA hsa-miR-302a SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859430 55859452 mRNA hsa-miR-302b SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859430 55859452 mRNA hsa-miR-302c SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859430 55859452 mRNA hsa-miR-302d SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859430 55859452 mRNA hsa-miR-372 SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859430 55859452 mRNA hsa-miR-373 SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859430 55859453 mRNA hsa-miR-20b SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859452 mRNA hsa-miR-520e SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859431 55859452 mRNA hsa-miR-520a-3p SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859452 mRNA hsa-miR-520b SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859431 55859452 mRNA hsa-miR-520c-3p SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859432 55859453 mRNA hsa-miR-519d SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859431 55859452 mRNA hsa-miR-520d-3p SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859437 55859454 mRNA hsa-miR-1297 SUV420H2 miRanda miRanda
14034 chr19 55859439 55859439 1 + C A rs1058511 55859454 + 55859434 55859474 41 GGGGGCTTGGAAGCACTTGAACTTTTTATTTTATTAAAACC GGGGGATTGGAAGCACTTGAACTTTTTATTTTATTAAAACC < 41bp 1 0.44398154445441 1 0.0722075998783112 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 KMT5C ENSG00000133247 UTR3 Human protein_coding chr19:55859454 chr19:55859439 . . 0 hm6A_associated_SNPs_20664 0 0 1 22 55859436 55859452 mRNA hsa-miR-302e SUV420H2 miRanda miRanda
14034 chr19 55899362 55899362 1 + C T rs114248857 55899374 + 55899354 55899394 41 GCCACGCTCAGCAGCATCAGACACATGATCCGCAAGAACAA GCCACGCTTAGCAGCATCAGACACATGATCCGCAAGAACAA < 41bp 1 0.717124253183157 1 0.978062629699707 experiment 0.565751493633685 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 9 RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899374 chr19:55899362 nonsynonymous SNV 0.769 0 hm6A_associated_SNPs_20669 0 0 1 1 55899361 55899384 mRNA hsa-miR-190b RPL28 miRanda miRanda
14034 chr19 56888866 56888866 1 + A G rs138356291 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CGCCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG < 41bp 1 0.39960073276707 1 0.999217510223389 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888866 . . 0 hm6A_associated_SNPs_20712 0 0 1 4 56888849 56888871 mRNA hsa-miR-148a ZNF542 miRanda miRanda
14034 chr19 56888866 56888866 1 + A G rs138356291 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CGCCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG < 41bp 1 0.39960073276707 1 0.999217510223389 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888866 . . 0 hm6A_associated_SNPs_20712 0 0 1 4 56888855 56888877 mRNA hsa-miR-7 ZNF542 miRanda miRanda
14034 chr19 56888866 56888866 1 + A G rs138356291 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CGCCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG < 41bp 1 0.39960073276707 1 0.999217510223389 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888866 . . 0 hm6A_associated_SNPs_20712 0 0 1 4 56888850 56888871 mRNA hsa-miR-152 ZNF542 miRanda miRanda
14034 chr19 56888866 56888866 1 + A G rs138356291 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CGCCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG < 41bp 1 0.39960073276707 1 0.999217510223389 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888866 . . 0 hm6A_associated_SNPs_20712 0 0 1 4 56888849 56888871 mRNA hsa-miR-148b ZNF542 miRanda miRanda
14034 chr19 56888887 56888887 1 + A G rs528166138 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CACCTGTCTTCCCTGATTGAACGTTGGAGAATTCACACTGG Direct Loss 1 0.278897676970316 1 0.998748779296875 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888887 . . 0 hm6A_associated_SNPs_20713 0 0 1 2 56888883 56888906 mRNA hsa-miR-199a-5p ZNF542 miRanda miRanda
14034 chr19 56888887 56888887 1 + A G rs528166138 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CACCTGTCTTCCCTGATTGAACGTTGGAGAATTCACACTGG Direct Loss 1 0.278897676970316 1 0.998748779296875 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 23 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888887 . . 0 hm6A_associated_SNPs_20713 0 0 1 2 56888883 56888906 mRNA hsa-miR-199b-5p ZNF542 miRanda miRanda
14034 chr19 57067354 57067354 1 + C T rs12975138 57067346 + 57067326 57067366 41 TTTATATGCATGAAGTTAAAACAACTGACGTTACTCAAGAA TTTATATGCATGAAGTTAAAACAACTGATGTTACTCAAGAA < 41bp 1 0.0429742635372554 1 0.347315788269043 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 ZFP28 ENSG00000269696 ncRNA_intronic Human antisense chr19:57067346 chr19:57067354 . . 0 hm6A_associated_SNPs_20717 0 0 0 1 57067333 57067355 mRNA hsa-miR-223 ZFP28 miRanda miRanda
14034 chr19 57773447 57773447 1 + T G rs4224 57773442 + 57773422 57773462 41 CAGGAGGTGTTCAGCGTAAGACAATTTAGGCACACGGAGCT CAGGAGGTGTTCAGCGTAAGACAATGTAGGCACACGGAGCT < 41bp 1 0.240016816943377 1 0.875301003456116 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 ZNF805 ENSG00000268713 ncRNA_exonic Human lincRNA chr19:57773442 chr19:57773447 . . 0 hm6A_associated_SNPs_20729 0 0 1 1 57773438 57773461 lncRNA hsa-miR-3605-3p AC005261.3 miRanda starBase2
14034 chr19 57803661 57803661 1 + T C rs185214458 57803676 + 57803656 57803696 41 CGAAATAGTTTTTTAATATAACCACTGAAGAAAATCTGTGG CGAAACAGTTTTTTAATATAACCACTGAAGAAAATCTGTGG < 41bp 1 0.201287979259833 1 0.991354703903198 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 6 ZNF460 ENSG00000197714 UTR3 Human protein_coding chr19:57803676 chr19:57803661 . . 0 hm6A_associated_SNPs_20731 0 0 1 1 57803661 57803682 mRNA hsa-miR-140-5p ZNF460 miRanda miRanda
14034 chr19 57869547 57869547 1 + G A rs73063255 57869548 + 57869528 57869568 41 ATTTTGCTCAGGGAAGGCAGACTTCTGTGCTTTCTTTCCTG ATTTTGCTCAGGGAAGGCAAACTTCTGTGCTTTCTTTCCTG < 41bp 1 0.229767946416796 1 0.633668422698975 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 ZNF304 ENSG00000131845 UTR3 Human protein_coding chr19:57869548 chr19:57869547 . . 0 hm6A_associated_SNPs_20737 0 0 1 1 57869531 57869550 mRNA hsa-miR-346 ZNF304 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153937 + 58153917 58153957 41 TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCA TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCA < 41bp 1 0.49456588555643 1 0.973632574081421 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153937 chr19:58153952 . . 0 hm6A_associated_SNPs_20749 0 0 0 4 58153931 58153952 mRNA hsa-miR-320a ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153937 + 58153917 58153957 41 TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCA TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCA < 41bp 1 0.49456588555643 1 0.973632574081421 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153937 chr19:58153952 . . 0 hm6A_associated_SNPs_20749 0 0 0 4 58153931 58153952 mRNA hsa-miR-320b ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153937 + 58153917 58153957 41 TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCA TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCA < 41bp 1 0.49456588555643 1 0.973632574081421 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153937 chr19:58153952 . . 0 hm6A_associated_SNPs_20749 0 0 0 4 58153933 58153952 mRNA hsa-miR-320c ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153937 + 58153917 58153957 41 TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCA TCTGACAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCA < 41bp 1 0.49456588555643 1 0.973632574081421 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 36 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153937 chr19:58153952 . . 0 hm6A_associated_SNPs_20749 0 0 0 4 58153934 58153952 mRNA hsa-miR-320d ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153942 + 58153922 58153962 41 CAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCAGAGAA CAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCAGAGAA < 41bp 1 0.161021036337012 1 0.908185839653015 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153942 chr19:58153952 . . 0 hm6A_associated_SNPs_20750 0 0 0 4 58153931 58153952 mRNA hsa-miR-320a ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153942 + 58153922 58153962 41 CAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCAGAGAA CAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCAGAGAA < 41bp 1 0.161021036337012 1 0.908185839653015 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153942 chr19:58153952 . . 0 hm6A_associated_SNPs_20750 0 0 0 4 58153931 58153952 mRNA hsa-miR-320b ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153942 + 58153922 58153962 41 CAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCAGAGAA CAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCAGAGAA < 41bp 1 0.161021036337012 1 0.908185839653015 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153942 chr19:58153952 . . 0 hm6A_associated_SNPs_20750 0 0 0 4 58153933 58153952 mRNA hsa-miR-320c ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153942 + 58153922 58153962 41 CAAGTTAGGGCATGGACTTGACCCAGCTTTGTGCCAGAGAA CAAGTTAGGGCATGGACTTGACCCAGCTTTCTGCCAGAGAA < 41bp 1 0.161021036337012 1 0.908185839653015 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153942 chr19:58153952 . . 0 hm6A_associated_SNPs_20750 0 0 0 4 58153934 58153952 mRNA hsa-miR-320d ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153962 + 58153942 58153982 41 ACCCAGCTTTGTGCCAGAGAACCCAATATGAGTGTTGTTGG ACCCAGCTTTCTGCCAGAGAACCCAATATGAGTGTTGTTGG < 41bp 1 0.168383238556559 1 0.941310107707977 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153962 chr19:58153952 . . 0 hm6A_associated_SNPs_20751 0 0 0 4 58153931 58153952 mRNA hsa-miR-320a ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153962 + 58153942 58153982 41 ACCCAGCTTTGTGCCAGAGAACCCAATATGAGTGTTGTTGG ACCCAGCTTTCTGCCAGAGAACCCAATATGAGTGTTGTTGG < 41bp 1 0.168383238556559 1 0.941310107707977 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153962 chr19:58153952 . . 0 hm6A_associated_SNPs_20751 0 0 0 4 58153931 58153952 mRNA hsa-miR-320b ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153962 + 58153942 58153982 41 ACCCAGCTTTGTGCCAGAGAACCCAATATGAGTGTTGTTGG ACCCAGCTTTCTGCCAGAGAACCCAATATGAGTGTTGTTGG < 41bp 1 0.168383238556559 1 0.941310107707977 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153962 chr19:58153952 . . 0 hm6A_associated_SNPs_20751 0 0 0 4 58153933 58153952 mRNA hsa-miR-320c ZNF211 miRanda miRanda
14034 chr19 58153952 58153952 1 + G C rs3746212 58153962 + 58153942 58153982 41 ACCCAGCTTTGTGCCAGAGAACCCAATATGAGTGTTGTTGG ACCCAGCTTTCTGCCAGAGAACCCAATATGAGTGTTGTTGG < 41bp 1 0.168383238556559 1 0.941310107707977 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 ZNF211 ENSG00000121417 UTR3 Human protein_coding chr19:58153962 chr19:58153952 . . 0 hm6A_associated_SNPs_20751 0 0 0 4 58153934 58153952 mRNA hsa-miR-320d ZNF211 miRanda miRanda
14034 chr19 58291562 58291562 1 + T C rs10401255 58291565 + 58291545 58291585 41 CTGCCCAGGTCTCTTGCTAGACTTCTGTGACTTACAGTTCT CTGCCCAGGTCTCTTGCCAGACTTCTGTGACTTACAGTTCT < 41bp 1 0.489752525720995 1 0.913446545600891 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 ZNF586 ENSG00000083828 UTR3 Human protein_coding chr19:58291565 chr19:58291562 . . 0 hm6A_associated_SNPs_20760 0 0 1 1 58291559 58291578 mRNA hsa-miR-224 ZNF586 miRanda miRanda
14034 chr19 58372507 58372507 1 + G A rs10426822 58372494 + 58372474 58372514 41 GCCTCAGCTTCTCAGGTGTGACCTACTGTGCTTGGCCTAAT GCCTCAGCTTCTCAGGTGTGACCTACTGTGCTTAGCCTAAT < 41bp 1 0.152891512896755 1 0.00696843862533569 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 ZNF587 ENSG00000198466 UTR3 Human protein_coding chr19:58372494 chr19:58372507 . . 0 hm6A_associated_SNPs_20763 0 0 1 1 58372501 58372524 mRNA hsa-miR-382 ZNF587 miRanda miRanda
14034 chr19 58724801 58724801 1 + A G rs566224937 58724802 + 58724782 58724822 41 TCTGAAAATGTTATATAATAACTTTAAAAAGCCAGGTAATT TCTGAAAATGTTATATAATGACTTTAAAAAGCCAGGTAATT < 41bp 1 0.53372287085755 1 0.725476980209351 experiment 0.9325542582849 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ZNF274 ENSG00000171606 UTR3 Human protein_coding chr19:58724802 chr19:58724801 . . 0 hm6A_associated_SNPs_20765 0 0 1 4 58724792 58724817 mRNA hsa-miR-135a ZNF274 miRanda miRanda
14034 chr19 58724801 58724801 1 + A G rs566224937 58724802 + 58724782 58724822 41 TCTGAAAATGTTATATAATAACTTTAAAAAGCCAGGTAATT TCTGAAAATGTTATATAATGACTTTAAAAAGCCAGGTAATT < 41bp 1 0.53372287085755 1 0.725476980209351 experiment 0.9325542582849 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ZNF274 ENSG00000171606 UTR3 Human protein_coding chr19:58724802 chr19:58724801 . . 0 hm6A_associated_SNPs_20765 0 0 1 4 58724795 58724817 mRNA hsa-miR-149 ZNF274 miRanda miRanda
14034 chr19 58724801 58724801 1 + A G rs566224937 58724802 + 58724782 58724822 41 TCTGAAAATGTTATATAATAACTTTAAAAAGCCAGGTAATT TCTGAAAATGTTATATAATGACTTTAAAAAGCCAGGTAATT < 41bp 1 0.53372287085755 1 0.725476980209351 experiment 0.9325542582849 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ZNF274 ENSG00000171606 UTR3 Human protein_coding chr19:58724802 chr19:58724801 . . 0 hm6A_associated_SNPs_20765 0 0 1 4 58724792 58724817 mRNA hsa-miR-135b ZNF274 miRanda miRanda
14034 chr19 58724801 58724801 1 + A G rs566224937 58724802 + 58724782 58724822 41 TCTGAAAATGTTATATAATAACTTTAAAAAGCCAGGTAATT TCTGAAAATGTTATATAATGACTTTAAAAAGCCAGGTAATT < 41bp 1 0.53372287085755 1 0.725476980209351 experiment 0.9325542582849 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ZNF274 ENSG00000171606 UTR3 Human protein_coding chr19:58724802 chr19:58724801 . . 0 hm6A_associated_SNPs_20765 0 0 1 4 58724799 58724820 mRNA hsa-miR-490-3p ZNF274 miRanda miRanda
14034 chr19 58773257 58773257 1 + A G rs139999655 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG CGAGTTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG < 41bp 1 0.324434870382001 1 0.999500513076782 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773257 nonsynonymous SNV 0.330 0 hm6A_associated_SNPs_20768 0 0 1 2 58773248 58773268 mRNA hsa-miR-199a-5p ZNF544 miRanda miRanda
14034 chr19 58773257 58773257 1 + A G rs139999655 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG CGAGTTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG < 41bp 1 0.324434870382001 1 0.999500513076782 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773257 nonsynonymous SNV 0.330 0 hm6A_associated_SNPs_20768 0 0 1 2 58773243 58773268 mRNA hsa-miR-199b-5p ZNF544 miRanda miRanda
14034 chr19 58774274 58774274 1 + C T rs7246802 58774255 + 58774235 58774275 41 GACTCATTGAACATCAGAGGACATATCCTGGAGAAAAGCCC GACTCATTGAACATCAGAGGACATATCCTGGAGAAAAGCTC < 41bp 1 0.654865133190362 1 0.999446630477905 experiment 0.690269733619277 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 40 ZNF544 ENSG00000268516 ncRNA_intronic Human antisense chr19:58774255 chr19:58774274 . . 0 hm6A_associated_SNPs_20769 0 0 1 1 58774266 58774286 mRNA hsa-miR-33a ZNF544 miRanda miRanda
14034 chr19 58774513 58774513 1 + T A rs7248057 58774523 + 58774503 58774543 41 AGAAAGCTCATGGGCAAGAAACTCTATGAATAACCAAGATG AGAAAGCTCAAGGGCAAGAAACTCTATGAATAACCAAGATG < 41bp 1 0.243057570126989 1 0.971676349639893 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ZNF544 ENSG00000268516 ncRNA_intronic Human antisense chr19:58774523 chr19:58774513 . . 0 hm6A_associated_SNPs_20770 0 0 1 3 58774512 58774532 mRNA hsa-miR-376a ZNF544 miRanda miRanda
14034 chr19 58774513 58774513 1 + T A rs7248057 58774523 + 58774503 58774543 41 AGAAAGCTCATGGGCAAGAAACTCTATGAATAACCAAGATG AGAAAGCTCAAGGGCAAGAAACTCTATGAATAACCAAGATG < 41bp 1 0.243057570126989 1 0.971676349639893 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ZNF544 ENSG00000268516 ncRNA_intronic Human antisense chr19:58774523 chr19:58774513 . . 0 hm6A_associated_SNPs_20770 0 0 1 3 58774490 58774514 mRNA hsa-miR-135b ZNF544 miRanda miRanda
14034 chr19 58774513 58774513 1 + T A rs7248057 58774523 + 58774503 58774543 41 AGAAAGCTCATGGGCAAGAAACTCTATGAATAACCAAGATG AGAAAGCTCAAGGGCAAGAAACTCTATGAATAACCAAGATG < 41bp 1 0.243057570126989 1 0.971676349639893 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 ZNF544 ENSG00000268516 ncRNA_intronic Human antisense chr19:58774523 chr19:58774513 . . 0 hm6A_associated_SNPs_20770 0 0 1 3 58774509 58774532 mRNA hsa-miR-376b ZNF544 miRanda miRanda
14034 chr19 58774517 58774517 1 + C T rs146947327 58774523 + 58774503 58774543 41 AGAAAGCTCATGGGCAAGAAACTCTATGAATAACCAAGATG AGAAAGCTCATGGGTAAGAAACTCTATGAATAACCAAGATG < 41bp 1 0.219239281366482 1 0.935768723487854 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 ZNF544 ENSG00000268516 ncRNA_intronic Human antisense chr19:58774523 chr19:58774517 . . 0 hm6A_associated_SNPs_20771 0 0 1 2 58774512 58774532 mRNA hsa-miR-376a ZNF544 miRanda miRanda
14034 chr19 58774517 58774517 1 + C T rs146947327 58774523 + 58774503 58774543 41 AGAAAGCTCATGGGCAAGAAACTCTATGAATAACCAAGATG AGAAAGCTCATGGGTAAGAAACTCTATGAATAACCAAGATG < 41bp 1 0.219239281366482 1 0.935768723487854 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 ZNF544 ENSG00000268516 ncRNA_intronic Human antisense chr19:58774523 chr19:58774517 . . 0 hm6A_associated_SNPs_20771 0 0 1 2 58774509 58774532 mRNA hsa-miR-376b ZNF544 miRanda miRanda
14034 chr19 58806921 58806921 1 + G A rs188839301 58806910 + 58806890 58806930 41 AGAATCCACATAGGAGAGAAACTTTGCTGATGACTTTTAAC AGAATCCACATAGGAGAGAAACTTTGCTGATAACTTTTAAC < 41bp 1 0.361875803372195 1 0.954484462738037 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 ZNF8-ERVK3-1 ENSG00000083842;ENSG00000267216;ENSG00000273439 UTR3 Human other chr19:58806910 chr19:58806921 . . 0 hm6A_associated_SNPs_20774 0 0 1 1 58806914 58806935 mRNA hsa-miR-140-5p ZNF8 miRanda miRanda
14034 chr19 58806921 58806921 1 + G A rs188839301 58806922 + 58806902 58806942 41 GGAGAGAAACTTTGCTGATGACTTTTAACCACAAGTAAAAA GGAGAGAAACTTTGCTGATAACTTTTAACCACAAGTAAAAA < 41bp 1 0.40605835868794 1 0.819455027580261 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 ZNF8-ERVK3-1 ENSG00000083842;ENSG00000267216;ENSG00000273439 UTR3 Human other chr19:58806922 chr19:58806921 . . 0 hm6A_associated_SNPs_20775 0 0 1 1 58806914 58806935 mRNA hsa-miR-140-5p ZNF8 miRanda miRanda
14034 chr19 58853363 58853363 1 + C T rs1268538 58853380 + 58853360 58853400 41 GCTCAGTCTCTGTCACAAGAACTGGATCTCCATCCCCTTGA GCTTAGTCTCTGTCACAAGAACTGGATCTCCATCCCCTTGA < 41bp 1 0.0549509095863976 1 0.00494301319122314 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 ZSCAN22 ENSG00000182318 UTR3 Human protein_coding chr19:58853380 chr19:58853363 . . 0 hm6A_associated_SNPs_20782 0 0 0 1 58853352 58853376 mRNA hsa-miR-542-3p ZSCAN22 miRanda miRanda
14034 chr19 58929303 58929303 1 + G A rs79136063 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGAAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.634438513550974 1 0.936986207962036 experiment 0.731122972898052 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929303 . . 0 hm6A_associated_SNPs_20794 0 0 1 5 58929297 58929318 mRNA hsa-miR-130a ZNF584 miRanda miRanda
14034 chr19 58929303 58929303 1 + G A rs79136063 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGAAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.634438513550974 1 0.936986207962036 experiment 0.731122972898052 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929303 . . 0 hm6A_associated_SNPs_20794 0 0 1 5 58929296 58929318 mRNA hsa-miR-301a ZNF584 miRanda miRanda
14034 chr19 58929303 58929303 1 + G A rs79136063 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGAAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.634438513550974 1 0.936986207962036 experiment 0.731122972898052 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929303 . . 0 hm6A_associated_SNPs_20794 0 0 1 5 58929298 58929318 mRNA hsa-miR-130b ZNF584 miRanda miRanda
14034 chr19 58929303 58929303 1 + G A rs79136063 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGAAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.634438513550974 1 0.936986207962036 experiment 0.731122972898052 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929303 . . 0 hm6A_associated_SNPs_20794 0 0 1 5 58929296 58929318 mRNA hsa-miR-454 ZNF584 miRanda miRanda
14034 chr19 58929303 58929303 1 + G A rs79136063 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGAAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.634438513550974 1 0.936986207962036 experiment 0.731122972898052 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929303 . . 0 hm6A_associated_SNPs_20794 0 0 1 5 58929296 58929318 mRNA hsa-miR-301b ZNF584 miRanda miRanda
14034 chr19 58929305 58929305 1 + G C rs3764531 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGACCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.627646267720355 1 0.913532137870789 experiment 0.744707464559289 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929305 . . 0 hm6A_associated_SNPs_20795 0 0 1 5 58929297 58929318 mRNA hsa-miR-130a ZNF584 miRanda miRanda
14034 chr19 58929305 58929305 1 + G C rs3764531 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGACCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.627646267720355 1 0.913532137870789 experiment 0.744707464559289 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929305 . . 0 hm6A_associated_SNPs_20795 0 0 1 5 58929296 58929318 mRNA hsa-miR-301a ZNF584 miRanda miRanda
14034 chr19 58929305 58929305 1 + G C rs3764531 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGACCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.627646267720355 1 0.913532137870789 experiment 0.744707464559289 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929305 . . 0 hm6A_associated_SNPs_20795 0 0 1 5 58929298 58929318 mRNA hsa-miR-130b ZNF584 miRanda miRanda
14034 chr19 58929305 58929305 1 + G C rs3764531 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGACCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.627646267720355 1 0.913532137870789 experiment 0.744707464559289 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929305 . . 0 hm6A_associated_SNPs_20795 0 0 1 5 58929296 58929318 mRNA hsa-miR-454 ZNF584 miRanda miRanda
14034 chr19 58929305 58929305 1 + G C rs3764531 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGACCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.627646267720355 1 0.913532137870789 experiment 0.744707464559289 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929305 . . 0 hm6A_associated_SNPs_20795 0 0 1 5 58929296 58929318 mRNA hsa-miR-301b ZNF584 miRanda miRanda
14034 chr19 58929310 58929310 1 + A C rs79708639 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGAGCCACCTTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.667136680412446 1 0.905295312404633 experiment 0.665726639175108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929310 . . 0 hm6A_associated_SNPs_20796 0 0 1 5 58929297 58929318 mRNA hsa-miR-130a ZNF584 miRanda miRanda
14034 chr19 58929310 58929310 1 + A C rs79708639 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGAGCCACCTTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.667136680412446 1 0.905295312404633 experiment 0.665726639175108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929310 . . 0 hm6A_associated_SNPs_20796 0 0 1 5 58929296 58929318 mRNA hsa-miR-301a ZNF584 miRanda miRanda
14034 chr19 58929310 58929310 1 + A C rs79708639 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGAGCCACCTTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.667136680412446 1 0.905295312404633 experiment 0.665726639175108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929310 . . 0 hm6A_associated_SNPs_20796 0 0 1 5 58929298 58929318 mRNA hsa-miR-130b ZNF584 miRanda miRanda
14034 chr19 58929310 58929310 1 + A C rs79708639 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGAGCCACCTTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.667136680412446 1 0.905295312404633 experiment 0.665726639175108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929310 . . 0 hm6A_associated_SNPs_20796 0 0 1 5 58929296 58929318 mRNA hsa-miR-454 ZNF584 miRanda miRanda
14034 chr19 58929310 58929310 1 + A C rs79708639 58929321 + 58929301 58929341 41 GGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCA GGGAGCCACCTTGCACTCTGACTTGCCTGGGGCTGTTGGCA < 41bp 1 0.667136680412446 1 0.905295312404633 experiment 0.665726639175108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ZNF584 ENSG00000171574 UTR3 Human protein_coding chr19:58929321 chr19:58929310 . . 0 hm6A_associated_SNPs_20796 0 0 1 5 58929296 58929318 mRNA hsa-miR-301b ZNF584 miRanda miRanda
14034 chr19 58983841 58983841 1 + T C rs114922536 58983845 + 58983825 58983865 41 GTGCGGCTTCATGTGATATGACAGTGGATGCTAAGGTGAGA GTGCGGCTTCATGTGACATGACAGTGGATGCTAAGGTGAGA < 41bp 1 0.569848258233816 1 0.916274070739746 experiment 0.860303483532367 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 17 ZNF324 ENSG00000083812 UTR3 Human protein_coding chr19:58983845 chr19:58983841 . . 0 hm6A_associated_SNPs_20806 0 0 1 2 58983832 58983857 mRNA hsa-miR-29b ZNF324 miRanda miRanda
14034 chr19 58983841 58983841 1 + T C rs114922536 58983845 + 58983825 58983865 41 GTGCGGCTTCATGTGATATGACAGTGGATGCTAAGGTGAGA GTGCGGCTTCATGTGACATGACAGTGGATGCTAAGGTGAGA < 41bp 1 0.569848258233816 1 0.916274070739746 experiment 0.860303483532367 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 17 ZNF324 ENSG00000083812 UTR3 Human protein_coding chr19:58983845 chr19:58983841 . . 0 hm6A_associated_SNPs_20806 0 0 1 2 58983834 58983857 mRNA hsa-miR-29c ZNF324 miRanda miRanda
14034 chr19 58984026 58984026 1 + A G rs147160818 58984013 + 58983993 58984033 41 CCTAGGGGCCAGCCTAGCAGACAAGAGACCACAAGGGACTG CCTAGGGGCCAGCCTAGCAGACAAGAGACCACAGGGGACTG < 41bp 1 0.586645640213309 1 0.192740231752396 experiment 0.826708719573382 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF324 ENSG00000083812 UTR3 Human protein_coding chr19:58984013 chr19:58984026 . . 0 hm6A_associated_SNPs_20807 0 0 1 1 58984005 58984028 mRNA hsa-miR-9 ZNF324 miRanda miRanda
14034 chr19 58984026 58984026 1 + A G rs147160818 58984020 + 58984000 58984040 41 GCCAGCCTAGCAGACAAGAGACCACAAGGGACTGGGGATCA GCCAGCCTAGCAGACAAGAGACCACAGGGGACTGGGGATCA < 41bp 1 0.657714626317759 1 0.147186785936356 experiment 0.684570747364482 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 ZNF324 ENSG00000083812 UTR3 Human protein_coding chr19:58984020 chr19:58984026 . . 0 hm6A_associated_SNPs_20808 0 0 1 1 58984005 58984028 mRNA hsa-miR-9 ZNF324 miRanda miRanda
14034 chr19 58992448 58992448 1 + A C rs199772469 58992450 + 58992430 58992470 41 CCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCT CCTCAGGTGGGTGTTCAACAACTGTGCCTTCCCACTCGTCT Direct Loss 1 0.726584415195783 1 0.821940779685974 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 ZNF446 ENSG00000083807;ENSG00000083838 UTR3 Human other chr19:58992450 chr19:58992448 . . 0 hm6A_associated_SNPs_20814 0 0 1 2 58992441 58992460 mRNA hsa-miR-124 ZNF446 miRanda miRanda
14034 chr19 58992448 58992448 1 + A C rs199772469 58992450 + 58992430 58992470 41 CCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCT CCTCAGGTGGGTGTTCAACAACTGTGCCTTCCCACTCGTCT Direct Loss 1 0.726584415195783 1 0.821940779685974 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 ZNF446 ENSG00000083807;ENSG00000083838 UTR3 Human other chr19:58992450 chr19:58992448 . . 0 hm6A_associated_SNPs_20814 0 0 1 2 58992439 58992460 mRNA hsa-miR-506 ZNF446 miRanda miRanda
14034 chr19 59094136 59094136 1 + A G rs8106379 59094129 + 59094109 59094149 41 GTTCTCAGACGCTTCCATGAACTCTCAAGTGTGACTTATTA GTTCTCAGACGCTTCCATGAACTCTCAGGTGTGACTTATTA < 41bp 1 0.676969279641164 1 0.742432117462158 experiment 0.646061440717672 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 28 CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59094129 chr19:59094136 . . 0 hm6A_associated_SNPs_20825 0 0 1 1 59094123 59094146 mRNA hsa-miR-224 MGC2752 miRanda miRanda
14034 chr19 59094136 59094136 1 + A G rs8106379 59094142 + 59094122 59094162 41 TCCATGAACTCTCAAGTGTGACTTATTACAGCCTGGGGCTC TCCATGAACTCTCAGGTGTGACTTATTACAGCCTGGGGCTC < 41bp 1 0.58350937613165 1 0.303297519683838 experiment 0.832981247736699 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 15 CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59094142 chr19:59094136 . . 0 hm6A_associated_SNPs_20826 0 0 1 1 59094123 59094146 mRNA hsa-miR-224 MGC2752 miRanda miRanda
14034 chr19 59094374 59094374 1 + C T rs76447935 59094354 + 59094334 59094374 41 TTCTGTTCACATTTCCACTGACCTTCAATCCTGTAGACTGC TTCTGTTCACATTTCCACTGACCTTCAATCCTGTAGACTGT < 41bp 1 0.325321370379618 1 0.287411093711853 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59094354 chr19:59094374 . . 0 hm6A_associated_SNPs_20827 0 0 1 1 59094367 59094389 mRNA hsa-miR-149 MGC2752 miRanda miRanda
14034 chr19 59094374 59094374 1 + C T rs76447935 59094370 + 59094350 59094390 41 ACTGACCTTCAATCCTGTAGACTGCAAAGATTGAGCCAGCT ACTGACCTTCAATCCTGTAGACTGTAAAGATTGAGCCAGCT < 41bp 1 0.611901474639253 1 0.806246161460876 experiment 0.776197050721495 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 25 CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59094370 chr19:59094374 . . 0 hm6A_associated_SNPs_20828 0 0 1 1 59094367 59094389 mRNA hsa-miR-149 MGC2752 miRanda miRanda
14034 chr20 334550 334550 1 + G A rs73576416 334534 + 334514 334554 41 AAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCCGTCCC AAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCCATCCC < 41bp 1 0.567641219504604 1 0.759765028953552 experiment 0.864717560990791 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 NRSN2 ENSG00000125841 UTR3 Human protein_coding chr20:334534 chr20:334550 . . 0 hm6A_associated_SNPs_20836 0 0 1 1 334537 334558 mRNA hsa-miR-491-5p NRSN2 miRanda miRanda
14034 chr20 334932 334932 1 + A C rs117189209 334933 + 334913 334953 41 GCAGCATGCAGGAACTAGAAACACATCTTCAGCCTCCTCCT GCAGCATGCAGGAACTAGACACACATCTTCAGCCTCCTCCT Direct Loss 1 0.730735370375141 1 0.409195899963379 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 20 NRSN2 ENSG00000125841 UTR3 Human protein_coding chr20:334933 chr20:334932 . . 0 hm6A_associated_SNPs_20837 0 0 1 1 334929 334949 mRNA hsa-miR-485-5p NRSN2 miRanda miRanda
14034 chr20 1918515 1918515 1 + C T rs112665073 1918502 + 1918482 1918522 41 GAACTGCCTGGGGTCCAAGAACTCTTGTGCCTCCGTCCATC GAACTGCCTGGGGTCCAAGAACTCTTGTGCCTCTGTCCATC < 41bp 1 0.542135163356551 1 0.996746897697449 experiment 0.915729673286899 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 SIRPA ENSG00000198053 UTR3 Human protein_coding chr20:1918502 chr20:1918515 . . 0 hm6A_associated_SNPs_20860 0 0 0 1 1918502 1918520 mRNA hsa-miR-184 SIRPA miRanda miRanda
14034 chr20 1918922 1918922 1 + C G rs143167188 1918930 + 1918910 1918950 41 AACTGTGTTGCTCCACCCGGACCCATCTCTCCCTTCTAGAC AACTGTGTTGCTGCACCCGGACCCATCTCTCCCTTCTAGAC < 41bp 1 0.204935322398638 1 0.986686229705811 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 13 SIRPA ENSG00000198053 UTR3 Human protein_coding chr20:1918930 chr20:1918922 . . 0 hm6A_associated_SNPs_20861 0 0 1 1 1918921 1918942 mRNA hsa-miR-185 SIRPA miRanda miRanda
14034 chr20 2637071 2637071 1 + T C rs8958 2637083 + 2637063 2637103 41 GGTAACACTCCAAAATATGGACTCATTTTCCACTCCACCTT GGTAACACCCCAAAATATGGACTCATTTTCCACTCCACCTT < 41bp 1 0.706551816126461 1 0.947940230369568 experiment 0.586896367747078 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637083 chr20:2637071 synonymous SNV . 0 hm6A_associated_SNPs_20868 1 0 1 1 2637052 2637074 mRNA hsa-miR-122 NOP56 miRanda miRanda
14034 chr20 3028762 3028762 1 + A C rs180740190 3028768 + 3028748 3028788 41 TCCATCTCACAGAGAATCAGACAGGGCCACAGCCCCCTCAG TCCATCTCACAGAGCATCAGACAGGGCCACAGCCCCCTCAG < 41bp 1 0.685030170419979 1 0.683240652084351 experiment 0.629939659160042 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 15 MRPS26 ENSG00000125901 UTR3 Human protein_coding chr20:3028768 chr20:3028762 . . 0 hm6A_associated_SNPs_20876 0 0 1 2 3028756 3028777 mRNA hsa-miR-328 MRPS26 miRanda miRanda
14034 chr20 3028762 3028762 1 + A C rs180740190 3028768 + 3028748 3028788 41 TCCATCTCACAGAGAATCAGACAGGGCCACAGCCCCCTCAG TCCATCTCACAGAGCATCAGACAGGGCCACAGCCCCCTCAG < 41bp 1 0.685030170419979 1 0.683240652084351 experiment 0.629939659160042 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 15 MRPS26 ENSG00000125901 UTR3 Human protein_coding chr20:3028768 chr20:3028762 . . 0 hm6A_associated_SNPs_20876 0 0 1 2 3028752 3028774 mRNA hsa-miR-339-5p MRPS26 miRanda miRanda
14034 chr20 3028774 3028774 1 + C T rs41281236 3028768 + 3028748 3028788 41 TCCATCTCACAGAGAATCAGACAGGGCCACAGCCCCCTCAG TCCATCTCACAGAGAATCAGACAGGGTCACAGCCCCCTCAG < 41bp 1 0.680667344480112 1 0.498192608356476 experiment 0.638665311039775 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 27 MRPS26 ENSG00000125901 UTR3 Human protein_coding chr20:3028768 chr20:3028774 . . 0 hm6A_associated_SNPs_20877 0 0 1 2 3028756 3028777 mRNA hsa-miR-328 MRPS26 miRanda miRanda
14034 chr20 3028774 3028774 1 + C T rs41281236 3028768 + 3028748 3028788 41 TCCATCTCACAGAGAATCAGACAGGGCCACAGCCCCCTCAG TCCATCTCACAGAGAATCAGACAGGGTCACAGCCCCCTCAG < 41bp 1 0.680667344480112 1 0.498192608356476 experiment 0.638665311039775 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 27 MRPS26 ENSG00000125901 UTR3 Human protein_coding chr20:3028768 chr20:3028774 . . 0 hm6A_associated_SNPs_20877 0 0 1 2 3028752 3028774 mRNA hsa-miR-339-5p MRPS26 miRanda miRanda
14034 chr20 3090124 3090124 1 - A G rs913555 3090106 - 3090086 3090126 41 GATGACCTGAAAGGACACAAACTGGAATTTTCAGGTCTGTC GACGACCTGAAAGGACACAAACTGGAATTTTCAGGTCTGTC < 41bp 1 0.28775215223463 1 0.66981315612793 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 UBOX5-AS1 ENSG00000235958 ncRNA_exonic Human antisense chr20:3090106 chr20:3090124 . . 0 hm6A_associated_SNPs_20878 0 0 0 2 3090100 3090129 mRNA hsa-miR-145 UBOX5 miRanda miRanda
14034 chr20 3090124 3090124 1 - A G rs913555 3090106 - 3090086 3090126 41 GATGACCTGAAAGGACACAAACTGGAATTTTCAGGTCTGTC GACGACCTGAAAGGACACAAACTGGAATTTTCAGGTCTGTC < 41bp 1 0.28775215223463 1 0.66981315612793 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 UBOX5-AS1 ENSG00000235958 ncRNA_exonic Human antisense chr20:3090106 chr20:3090124 . . 0 hm6A_associated_SNPs_20878 0 0 0 2 3090106 3090127 mRNA hsa-miR-599 UBOX5 miRanda miRanda
14034 chr20 3090124 3090124 1 - A G rs913555 3090122 - 3090102 3090142 41 GGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGG GGCTGTCATTCCTGTCGACGACCTGAAAGGACACAAACTGG Direct Loss 1 0.107972873342413 1 0.917421698570251 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 19 UBOX5-AS1 ENSG00000235958 ncRNA_exonic Human antisense chr20:3090122 chr20:3090124 . . 0 hm6A_associated_SNPs_20879 0 0 0 2 3090100 3090129 mRNA hsa-miR-145 UBOX5 miRanda miRanda
14034 chr20 3090124 3090124 1 - A G rs913555 3090122 - 3090102 3090142 41 GGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGG GGCTGTCATTCCTGTCGACGACCTGAAAGGACACAAACTGG Direct Loss 1 0.107972873342413 1 0.917421698570251 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 19 UBOX5-AS1 ENSG00000235958 ncRNA_exonic Human antisense chr20:3090122 chr20:3090124 . . 0 hm6A_associated_SNPs_20879 0 0 0 2 3090106 3090127 mRNA hsa-miR-599 UBOX5 miRanda miRanda
14034 chr20 3786567 3786567 1 + C T rs1803263 3786580 + 3786560 3786600 41 ATGTGTGCCTATTTGTGTGGACAAAAATATTTACACTTAGG ATGTGTGTCTATTTGTGTGGACAAAAATATTTACACTTAGG < 41bp 1 0.560879133920227 1 0.457228392362595 experiment 0.878241732159546 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 CDC25B ENSG00000101224 UTR3 Human protein_coding chr20:3786580 chr20:3786567 . . 0 hm6A_associated_SNPs_20895 0 0 1 1 3786556 3786580 mRNA hsa-miR-377 CDC25B miRanda miRanda
14034 chr20 4176341 4176341 1 + C T rs6084660 4176328 + 4176308 4176348 41 GGAGACATGGGAAGGGCTGGACTGGCTCCCCTTCTCACTGT GGAGACATGGGAAGGGCTGGACTGGCTCCCCTTTTCACTGT < 41bp 1 0.481796796078625 1 0.880881905555725 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 LINC01433 ENSG00000230176 ncRNA_exonic Human antisense chr20:4176328 chr20:4176341 . . 0 hm6A_associated_SNPs_20921 0 0 0 1 4176330 4176350 mRNA hsa-miR-128 LOC728228 miRanda miRanda
14034 chr20 5171782 5171782 1 + C G rs73586501 5171778 + 5171758 5171798 41 TTCATGCACCCTTTGCCTGAACACCCATGTAGCTGCTGTGT TTCATGCACCCTTTGCCTGAACACGCATGTAGCTGCTGTGT < 41bp 1 0.355817253598605 1 0.563680112361908 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5171778 chr20:5171782 . . 0 hm6A_associated_SNPs_20937 0 0 1 5 5171773 5171795 mRNA hsa-miR-15a CDS2 miRanda miRanda
14034 chr20 5171782 5171782 1 + C G rs73586501 5171778 + 5171758 5171798 41 TTCATGCACCCTTTGCCTGAACACCCATGTAGCTGCTGTGT TTCATGCACCCTTTGCCTGAACACGCATGTAGCTGCTGTGT < 41bp 1 0.355817253598605 1 0.563680112361908 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5171778 chr20:5171782 . . 0 hm6A_associated_SNPs_20937 0 0 1 5 5171768 5171791 mRNA hsa-miR-221 CDS2 miRanda miRanda
14034 chr20 5171782 5171782 1 + C G rs73586501 5171778 + 5171758 5171798 41 TTCATGCACCCTTTGCCTGAACACCCATGTAGCTGCTGTGT TTCATGCACCCTTTGCCTGAACACGCATGTAGCTGCTGTGT < 41bp 1 0.355817253598605 1 0.563680112361908 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5171778 chr20:5171782 . . 0 hm6A_associated_SNPs_20937 0 0 1 5 5171771 5171791 mRNA hsa-miR-222 CDS2 miRanda miRanda
14034 chr20 5171782 5171782 1 + C G rs73586501 5171778 + 5171758 5171798 41 TTCATGCACCCTTTGCCTGAACACCCATGTAGCTGCTGTGT TTCATGCACCCTTTGCCTGAACACGCATGTAGCTGCTGTGT < 41bp 1 0.355817253598605 1 0.563680112361908 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5171778 chr20:5171782 . . 0 hm6A_associated_SNPs_20937 0 0 1 5 5171773 5171795 mRNA hsa-miR-15b CDS2 miRanda miRanda
14034 chr20 5171782 5171782 1 + C G rs73586501 5171778 + 5171758 5171798 41 TTCATGCACCCTTTGCCTGAACACCCATGTAGCTGCTGTGT TTCATGCACCCTTTGCCTGAACACGCATGTAGCTGCTGTGT < 41bp 1 0.355817253598605 1 0.563680112361908 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5171778 chr20:5171782 . . 0 hm6A_associated_SNPs_20937 0 0 1 5 5171774 5171795 mRNA hsa-miR-497 CDS2 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-let-7a BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-let-7b BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-let-7c BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-let-7d BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-let-7e BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-let-7f BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-miR-98 BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906579 11906602 mRNA hsa-let-7g BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906573 11906595 mRNA hsa-miR-190 BTBD3 miRanda miRanda
14034 chr20 11906592 11906592 1 + A G rs139242556 11906588 + 11906568 11906608 41 TTAATTGTTATTACTTTAAAACATATCTACCATCTGATTGG TTAATTGTTATTACTTTAAAACATGTCTACCATCTGATTGG < 41bp 1 0.439001782856872 1 0.0316281914710999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 BTBD3 ENSG00000132640 UTR3 Human protein_coding chr20:11906588 chr20:11906592 . . 0 hm6A_associated_SNPs_20952 0 0 1 10 11906575 11906595 mRNA hsa-miR-190b BTBD3 miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587917 + 17587897 17587937 41 CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATATGCA CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATGTGCA < 41bp 1 0.547325667381788 1 0.0705770254135132 experiment 0.905348665236424 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587917 chr20:17587933 . . 0 hm6A_associated_SNPs_20955 0 0 1 5 17587917 17587938 mRNA hsa-miR-153 DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587917 + 17587897 17587937 41 CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATATGCA CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATGTGCA < 41bp 1 0.547325667381788 1 0.0705770254135132 experiment 0.905348665236424 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587917 chr20:17587933 . . 0 hm6A_associated_SNPs_20955 0 0 1 5 17587916 17587936 mRNA hsa-miR-190 DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587917 + 17587897 17587937 41 CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATATGCA CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATGTGCA < 41bp 1 0.547325667381788 1 0.0705770254135132 experiment 0.905348665236424 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587917 chr20:17587933 . . 0 hm6A_associated_SNPs_20955 0 0 1 5 17587926 17587947 mRNA hsa-miR-296-3p DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587917 + 17587897 17587937 41 CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATATGCA CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATGTGCA < 41bp 1 0.547325667381788 1 0.0705770254135132 experiment 0.905348665236424 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587917 chr20:17587933 . . 0 hm6A_associated_SNPs_20955 0 0 1 5 17587913 17587938 mRNA hsa-miR-448 DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587917 + 17587897 17587937 41 CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATATGCA CTTGTCATCTTTTAGAGTAAACTATTCTATAAACATGTGCA < 41bp 1 0.547325667381788 1 0.0705770254135132 experiment 0.905348665236424 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587917 chr20:17587933 . . 0 hm6A_associated_SNPs_20955 0 0 1 5 17587915 17587936 mRNA hsa-miR-190b DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587929 + 17587909 17587949 41 TAGAGTAAACTATTCTATAAACATATGCAAACAGCCCTAAA TAGAGTAAACTATTCTATAAACATGTGCAAACAGCCCTAAA < 41bp 1 0.776424272473435 1 0.047782301902771 experiment 0.44715145505313 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587929 chr20:17587933 . . 0 hm6A_associated_SNPs_20956 0 0 1 5 17587917 17587938 mRNA hsa-miR-153 DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587929 + 17587909 17587949 41 TAGAGTAAACTATTCTATAAACATATGCAAACAGCCCTAAA TAGAGTAAACTATTCTATAAACATGTGCAAACAGCCCTAAA < 41bp 1 0.776424272473435 1 0.047782301902771 experiment 0.44715145505313 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587929 chr20:17587933 . . 0 hm6A_associated_SNPs_20956 0 0 1 5 17587916 17587936 mRNA hsa-miR-190 DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587929 + 17587909 17587949 41 TAGAGTAAACTATTCTATAAACATATGCAAACAGCCCTAAA TAGAGTAAACTATTCTATAAACATGTGCAAACAGCCCTAAA < 41bp 1 0.776424272473435 1 0.047782301902771 experiment 0.44715145505313 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587929 chr20:17587933 . . 0 hm6A_associated_SNPs_20956 0 0 1 5 17587926 17587947 mRNA hsa-miR-296-3p DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587929 + 17587909 17587949 41 TAGAGTAAACTATTCTATAAACATATGCAAACAGCCCTAAA TAGAGTAAACTATTCTATAAACATGTGCAAACAGCCCTAAA < 41bp 1 0.776424272473435 1 0.047782301902771 experiment 0.44715145505313 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587929 chr20:17587933 . . 0 hm6A_associated_SNPs_20956 0 0 1 5 17587913 17587938 mRNA hsa-miR-448 DSTN miRanda miRanda
14034 chr20 17587933 17587933 1 + A G rs11907325 17587929 + 17587909 17587949 41 TAGAGTAAACTATTCTATAAACATATGCAAACAGCCCTAAA TAGAGTAAACTATTCTATAAACATGTGCAAACAGCCCTAAA < 41bp 1 0.776424272473435 1 0.047782301902771 experiment 0.44715145505313 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587929 chr20:17587933 . . 0 hm6A_associated_SNPs_20956 0 0 1 5 17587915 17587936 mRNA hsa-miR-190b DSTN miRanda miRanda
14034 chr20 17950744 17950744 1 + C G rs150656271 17950742 + 17950722 17950762 41 GAAGATGCTTTGCTCTGTGGACCCGTGAGCAAGCATAAGCT GAAGATGCTTTGCTCTGTGGACGCGTGAGCAAGCATAAGCT Direct Loss 1 0.670417717110557 1 0.994120955467224 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950742 chr20:17950744 nonsynonymous SNV 0.110 2 hm6A_associated_SNPs_20958 0 0 1 2 17950741 17950763 mRNA hsa-miR-21 C20orf72 miRanda miRanda
14034 chr20 17950744 17950744 1 + C G rs150656271 17950742 + 17950722 17950762 41 GAAGATGCTTTGCTCTGTGGACCCGTGAGCAAGCATAAGCT GAAGATGCTTTGCTCTGTGGACGCGTGAGCAAGCATAAGCT Direct Loss 1 0.670417717110557 1 0.994120955467224 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950742 chr20:17950744 nonsynonymous SNV 0.110 2 hm6A_associated_SNPs_20958 0 0 1 2 17950742 17950763 mRNA hsa-miR-590-5p C20orf72 miRanda miRanda
14034 chr20 17970956 17970956 1 + C A rs553436022 17970941 + 17970921 17970961 41 CCCAAAGTCTAGATATAAAGACCTAGACTTCGGCACGCGAA CCCAAAGTCTAGATATAAAGACCTAGACTTCGGCAAGCGAA < 41bp 1 0.733054935838113 1 0.932123303413391 experiment 0.533890128323775 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|30867593;GSE121942;miCLIP;HepG2;Control 36 MGME1 ENSG00000125871 UTR3 Human protein_coding chr20:17970941 chr20:17970956 . . 0 hm6A_associated_SNPs_20961 0 0 1 1 17970942 17970966 mRNA hsa-miR-876-5p C20orf72 miRanda miRanda
14034 chr20 18168400 18168400 1 + G A rs41276422 18168407 + 18168387 18168427 41 TAAGAGTGAAAGAGCATCTAACCTGATGCTCTTGGAGAGAG TAAGAGTGAAAGAACATCTAACCTGATGCTCTTGGAGAGAG < 41bp 1 0.0749639240327594 1 0.215460479259491 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 KAT14 ENSG00000149474 UTR3 Human protein_coding chr20:18168407 chr20:18168400 . . 0 hm6A_associated_SNPs_20970 0 0 1 1 18168400 18168421 mRNA hsa-miR-335 CSRP2BP miRanda miRanda
14034 chr20 18550152 18550152 1 + T G rs143666555 18550161 + 18550141 18550181 41 GTATTTAAATTTGCTGTAAAACATAATCACTAATAATATGC GTATTTAAATTGGCTGTAAAACATAATCACTAATAATATGC < 41bp 1 0.4357617450421 1 0.339286863803864 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SMIM26 ENSG00000232388 ncRNA_exonic Human protein_coding chr20:18550161 chr20:18550152 . . 0 hm6A_associated_SNPs_20976 0 0 1 3 18550151 18550172 mRNA hsa-miR-140-5p LOC388789 miRanda miRanda
14034 chr20 18550152 18550152 1 + T G rs143666555 18550161 + 18550141 18550181 41 GTATTTAAATTTGCTGTAAAACATAATCACTAATAATATGC GTATTTAAATTGGCTGTAAAACATAATCACTAATAATATGC < 41bp 1 0.4357617450421 1 0.339286863803864 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SMIM26 ENSG00000232388 ncRNA_exonic Human protein_coding chr20:18550161 chr20:18550152 . . 0 hm6A_associated_SNPs_20976 0 0 1 3 18550147 18550169 mRNA hsa-miR-190 LOC388789 miRanda miRanda
14034 chr20 18550152 18550152 1 + T G rs143666555 18550161 + 18550141 18550181 41 GTATTTAAATTTGCTGTAAAACATAATCACTAATAATATGC GTATTTAAATTGGCTGTAAAACATAATCACTAATAATATGC < 41bp 1 0.4357617450421 1 0.339286863803864 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 SMIM26 ENSG00000232388 ncRNA_exonic Human protein_coding chr20:18550161 chr20:18550152 . . 0 hm6A_associated_SNPs_20976 0 0 1 3 18550148 18550169 mRNA hsa-miR-190b LOC388789 miRanda miRanda
14034 chr20 20014026 20014026 1 + A G rs78839366 20014032 + 20014012 20014052 41 TATTAAAGCTGTTCATTGTAACAAAATTCAATCAAAAAGGC TATTAAAGCTGTTCGTTGTAACAAAATTCAATCAAAAAGGC < 41bp 1 0.632408653384829 1 0.0725711584091187 experiment 0.735182693230342 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 NAA20 ENSG00000173418 UTR3 Human protein_coding chr20:20014032 chr20:20014026 . . 0 hm6A_associated_SNPs_20980 0 0 1 1 20014021 20014040 mRNA hsa-miR-590-3p NAA20 miRanda miRanda
14034 chr20 21370251 21370251 1 + A C rs541502317 21370267 + 21370247 21370287 41 AACCAGCTGTGGATTTCAAAACACAGTGTATTCTAGATCAT AACCCGCTGTGGATTTCAAAACACAGTGTATTCTAGATCAT < 41bp 1 0.599959387562621 1 0.937955856323242 experiment 0.800081224874757 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 5 XRN2 ENSG00000088930 UTR3 Human protein_coding chr20:21370267 chr20:21370251 . . 0 hm6A_associated_SNPs_20992 0 0 1 1 21370244 21370265 mRNA hsa-miR-203 XRN2 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351268 23351293 mRNA hsa-miR-17 GZF1 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351268 23351293 mRNA hsa-miR-20a GZF1 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351268 23351293 mRNA hsa-miR-93 GZF1 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351268 23351293 mRNA hsa-miR-106a GZF1 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351270 23351293 mRNA hsa-miR-106b GZF1 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351267 23351292 mRNA hsa-miR-372 GZF1 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351269 23351292 mRNA hsa-miR-373 GZF1 miRanda miRanda
14034 chr20 23351288 23351288 1 + A T rs17757228 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTTCTTTATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.727834025711791 1 0.107510417699814 experiment 0.544331948576418 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351288 . . 0 hm6A_associated_SNPs_20995 0 0 1 8 23351268 23351293 mRNA hsa-miR-20b GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351268 23351293 mRNA hsa-miR-17 GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351268 23351293 mRNA hsa-miR-20a GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351268 23351293 mRNA hsa-miR-93 GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351268 23351293 mRNA hsa-miR-106a GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351270 23351293 mRNA hsa-miR-106b GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351267 23351292 mRNA hsa-miR-372 GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351269 23351292 mRNA hsa-miR-373 GZF1 miRanda miRanda
14034 chr20 23351292 23351292 1 + T C rs536831719 23351297 + 23351277 23351317 41 TGATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAA TGATCTCAGCTACTTCATTGACAAAAAGGCAGTGAACATAA < 41bp 1 0.734826813146171 1 0.362580120563507 experiment 0.530346373707657 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 GZF1 ENSG00000125812 UTR3 Human protein_coding chr20:23351297 chr20:23351292 . . 0 hm6A_associated_SNPs_20996 0 0 1 8 23351268 23351293 mRNA hsa-miR-20b GZF1 miRanda miRanda
14034 chr20 25278147 25278147 1 + C T rs201487903 25278164 + 25278144 25278184 41 CAGCCTCGTCTGGAAAAAGGACCAGGGGTCCCGGAGGAACC CAGTCTCGTCTGGAAAAAGGACCAGGGGTCCCGGAGGAACC < 41bp 1 0.262962560311737 1 0.720168352127075 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 4 PYGB ENSG00000100994 UTR3 Human protein_coding chr20:25278164 chr20:25278147 . . 0 hm6A_associated_SNPs_21013 0 0 1 1 25278128 25278151 mRNA hsa-miR-485-5p PYGB miRanda miRanda
14034 chr20 30389258 30389258 1 + T A rs116120278 30389269 + 30389249 30389289 41 CACTTTTTTTAAAAATTTTAACCAGAAAATAAAGATAGTTA CACTTTTTTAAAAAATTTTAACCAGAAAATAAAGATAGTTA < 41bp 1 0.200524265242118 1 0.262868165969849 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 TPX2 ENSG00000088325 UTR3 Human protein_coding chr20:30389269 chr20:30389258 . . 0 hm6A_associated_SNPs_21038 0 0 1 1 30389246 30389266 mRNA hsa-miR-590-3p TPX2 miRanda miRanda
14034 chr20 30689478 30689478 1 + G A rs534090502 30689494 + 30689474 30689514 41 GACTGGAAAATCTCTTTTTGACTCTTGCAATCCACAATCTG GACTAGAAAATCTCTTTTTGACTCTTGCAATCCACAATCTG < 41bp 1 0.413373589714997 1 0.882945656776428 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 5 HCK ENSG00000101336 UTR3 Human protein_coding chr20:30689494 chr20:30689478 . . 0 hm6A_associated_SNPs_21039 0 0 0 1 30689469 30689491 mRNA hsa-miR-186 HCK miRanda miRanda
14034 chr20 30825130 30825130 1 + T C rs138762395 30825136 + 30825116 30825156 41 TGTAATAAATGTACTGTGGGACATGTTAATAAGTGCTATAA TGTAATAAATGTACCGTGGGACATGTTAATAAGTGCTATAA < 41bp 1 0.280604898848097 1 0.00246402621269226 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 15 POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30825136 chr20:30825130 . . 0 hm6A_associated_SNPs_21046 0 0 1 3 30825113 30825133 mRNA hsa-miR-101 POFUT1 miRanda miRanda
14034 chr20 30825130 30825130 1 + T C rs138762395 30825136 + 30825116 30825156 41 TGTAATAAATGTACTGTGGGACATGTTAATAAGTGCTATAA TGTAATAAATGTACCGTGGGACATGTTAATAAGTGCTATAA < 41bp 1 0.280604898848097 1 0.00246402621269226 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 15 POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30825136 chr20:30825130 . . 0 hm6A_associated_SNPs_21046 0 0 1 3 30825122 30825143 mRNA hsa-miR-212 POFUT1 miRanda miRanda
14034 chr20 30825130 30825130 1 + T C rs138762395 30825136 + 30825116 30825156 41 TGTAATAAATGTACTGTGGGACATGTTAATAAGTGCTATAA TGTAATAAATGTACCGTGGGACATGTTAATAAGTGCTATAA < 41bp 1 0.280604898848097 1 0.00246402621269226 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 15 POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30825136 chr20:30825130 . . 0 hm6A_associated_SNPs_21046 0 0 1 3 30825119 30825143 mRNA hsa-miR-543 POFUT1 miRanda miRanda
14034 chr20 30825132 30825132 1 + T C rs542809941 30825136 + 30825116 30825156 41 TGTAATAAATGTACTGTGGGACATGTTAATAAGTGCTATAA TGTAATAAATGTACTGCGGGACATGTTAATAAGTGCTATAA < 41bp 1 0.257242550860492 1 0.00358161330223083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 17 POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30825136 chr20:30825132 . . 0 hm6A_associated_SNPs_21047 0 0 1 3 30825113 30825133 mRNA hsa-miR-101 POFUT1 miRanda miRanda
14034 chr20 30825132 30825132 1 + T C rs542809941 30825136 + 30825116 30825156 41 TGTAATAAATGTACTGTGGGACATGTTAATAAGTGCTATAA TGTAATAAATGTACTGCGGGACATGTTAATAAGTGCTATAA < 41bp 1 0.257242550860492 1 0.00358161330223083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 17 POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30825136 chr20:30825132 . . 0 hm6A_associated_SNPs_21047 0 0 1 3 30825122 30825143 mRNA hsa-miR-212 POFUT1 miRanda miRanda
14034 chr20 30825132 30825132 1 + T C rs542809941 30825136 + 30825116 30825156 41 TGTAATAAATGTACTGTGGGACATGTTAATAAGTGCTATAA TGTAATAAATGTACTGCGGGACATGTTAATAAGTGCTATAA < 41bp 1 0.257242550860492 1 0.00358161330223083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 17 POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30825136 chr20:30825132 . . 0 hm6A_associated_SNPs_21047 0 0 1 3 30825119 30825143 mRNA hsa-miR-543 POFUT1 miRanda miRanda
14034 chr20 30921846 30921846 1 + A C rs3813921 30921827 + 30921807 30921847 41 CCTACCAAGCCCACTGAGGGACTAGGTTTTCATGTCTCTAG CCTACCAAGCCCACTGAGGGACTAGGTTTTCATGTCTCTCG < 41bp 1 0.559015554704761 1 0.924632549285889 experiment 0.881968890590478 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 KIF3B ENSG00000101350 UTR3 Human protein_coding chr20:30921827 chr20:30921846 . . 0 hm6A_associated_SNPs_21059 0 0 1 1 30921842 30921864 mRNA hsa-miR-543 KIF3B miRanda miRanda
14034 chr20 31396500 31396500 1 + G A rs557153882 31396519 + 31396499 31396539 41 AGCTGCCATATATTTTGTAGACAAGTATGGCTCCTCCATAT AACTGCCATATATTTTGTAGACAAGTATGGCTCCTCCATAT < 41bp 1 0.289446172307109 1 0.00793915987014771 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 DNMT3B ENSG00000088305 UTR3 Human protein_coding chr20:31396519 chr20:31396500 . . 0 hm6A_associated_SNPs_21069 0 0 1 2 31396482 31396503 mRNA hsa-miR-21 DNMT3B miRanda miRanda
14034 chr20 31396500 31396500 1 + G A rs557153882 31396519 + 31396499 31396539 41 AGCTGCCATATATTTTGTAGACAAGTATGGCTCCTCCATAT AACTGCCATATATTTTGTAGACAAGTATGGCTCCTCCATAT < 41bp 1 0.289446172307109 1 0.00793915987014771 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 DNMT3B ENSG00000088305 UTR3 Human protein_coding chr20:31396519 chr20:31396500 . . 0 hm6A_associated_SNPs_21069 0 0 1 2 31396481 31396503 mRNA hsa-miR-590-5p DNMT3B miRanda miRanda
14034 chr20 31436554 31436554 1 + A G rs6119993 31436534 + 31436514 31436554 41 GAGGAGCAAGAAGAGTATTAACAGCCTGGACCAGCAGAGCA GAGGAGCAAGAAGAGTATTAACAGCCTGGACCAGCAGAGCG < 41bp 1 0.590573735607087 1 0.862459540367126 experiment 0.818852528785825 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MAPRE1 ENSG00000260536 ncRNA_intronic Human antisense chr20:31436534 chr20:31436554 . . 0 hm6A_associated_SNPs_21071 0 0 1 2 31436552 31436575 mRNA hsa-miR-122 MAPRE1 miRanda miRanda
14034 chr20 31436554 31436554 1 + A G rs6119993 31436534 + 31436514 31436554 41 GAGGAGCAAGAAGAGTATTAACAGCCTGGACCAGCAGAGCA GAGGAGCAAGAAGAGTATTAACAGCCTGGACCAGCAGAGCG < 41bp 1 0.590573735607087 1 0.862459540367126 experiment 0.818852528785825 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MAPRE1 ENSG00000260536 ncRNA_intronic Human antisense chr20:31436534 chr20:31436554 . . 0 hm6A_associated_SNPs_21071 0 0 1 2 31436549 31436570 mRNA hsa-miR-186 MAPRE1 miRanda miRanda
14034 chr20 31436758 31436758 1 + C G rs185563382 31436768 + 31436748 31436788 41 CTAGTTGGTTCACCTGGAAAACAGAGAGGCTGACCGTGGGG CTAGTTGGTTGACCTGGAAAACAGAGAGGCTGACCGTGGGG < 41bp 1 0.782767598739727 1 0.783762574195862 experiment 0.434464802520545 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 MAPRE1 ENSG00000260536 ncRNA_intronic Human antisense chr20:31436768 chr20:31436758 . . 0 hm6A_associated_SNPs_21072 0 0 1 1 31436743 31436764 mRNA hsa-miR-125a-3p MAPRE1 miRanda miRanda
14034 chr20 31437373 31437373 1 + T G rs573209336 31437362 + 31437342 31437382 41 TCTAACAACTACTTTTGGGGACTTGCCCACATCTCTGGGAT TCTAACAACTACTTTTGGGGACTTGCCCACAGCTCTGGGAT < 41bp 1 0.434789345716893 1 0.640321493148804 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 MAPRE1 ENSG00000260536 ncRNA_intronic Human antisense chr20:31437362 chr20:31437373 . . 0 hm6A_associated_SNPs_21073 0 0 1 1 31437353 31437374 mRNA hsa-miR-299-3p MAPRE1 miRanda miRanda
14034 chr20 32232596 32232596 1 + T C rs184862783 32232598 + 32232578 32232618 41 GAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTG GAGTCCAAGCCTGAATAACAACACCCCACAGCCTCTCTGTG Direct Loss 1 0.542411166496905 1 0.966169238090515 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 CBFA2T2 ENSG00000078699 UTR3 Human protein_coding chr20:32232598 chr20:32232596 . . 0 hm6A_associated_SNPs_21076 0 0 1 1 32232591 32232613 mRNA hsa-miR-485-5p CBFA2T2 miRanda miRanda
14034 chr20 32441602 32441602 1 + T C rs187600351 32441620 + 32441600 32441640 41 GTTGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA GTCGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA < 41bp 1 0.793565839022216 1 0.943973064422607 experiment 0.412868321955569 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441620 chr20:32441602 . . 0 hm6A_associated_SNPs_21081 0 0 1 6 32441601 32441626 mRNA hsa-miR-145 CHMP4B miRanda miRanda
14034 chr20 32441602 32441602 1 + T C rs187600351 32441620 + 32441600 32441640 41 GTTGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA GTCGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA < 41bp 1 0.793565839022216 1 0.943973064422607 experiment 0.412868321955569 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441620 chr20:32441602 . . 0 hm6A_associated_SNPs_21081 0 0 1 6 32441585 32441606 mRNA hsa-miR-505 CHMP4B miRanda miRanda
14034 chr20 32441602 32441602 1 + T C rs187600351 32441620 + 32441600 32441640 41 GTTGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA GTCGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA < 41bp 1 0.793565839022216 1 0.943973064422607 experiment 0.412868321955569 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441620 chr20:32441602 . . 0 hm6A_associated_SNPs_21081 0 0 1 6 32441590 32441612 mRNA hsa-miR-539 CHMP4B miRanda miRanda
14034 chr20 32441602 32441602 1 + T C rs187600351 32441620 + 32441600 32441640 41 GTTGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA GTCGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA < 41bp 1 0.793565839022216 1 0.943973064422607 experiment 0.412868321955569 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441620 chr20:32441602 . . 0 hm6A_associated_SNPs_21081 0 0 1 6 32441599 32441619 mRNA hsa-miR-590-3p CHMP4B miRanda miRanda
14034 chr20 32441602 32441602 1 + T C rs187600351 32441620 + 32441600 32441640 41 GTTGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA GTCGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA < 41bp 1 0.793565839022216 1 0.943973064422607 experiment 0.412868321955569 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441620 chr20:32441602 . . 0 hm6A_associated_SNPs_21081 0 0 1 6 32441583 32441605 mRNA hsa-miR-421 CHMP4B miRanda miRanda
14034 chr20 32441602 32441602 1 + T C rs187600351 32441620 + 32441600 32441640 41 GTTGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA GTCGAATTTCTGTAAAATAAACTGTATTTGCAAATCCAACA < 41bp 1 0.793565839022216 1 0.943973064422607 experiment 0.412868321955569 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441620 chr20:32441602 . . 0 hm6A_associated_SNPs_21081 0 0 1 6 32441577 32441603 mRNA hsa-miR-543 CHMP4B miRanda miRanda
14034 chr20 33095774 33095774 1 + A G rs190970171 33095794 + 33095774 33095814 41 AGAAATCAGGTCTGCAAATGACTAGTCAGAACCTTGCTTAA GGAAATCAGGTCTGCAAATGACTAGTCAGAACCTTGCTTAA < 41bp 1 0.645965989271803 1 0.123742759227753 experiment 0.708068021456394 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 ITCH ENSG00000078747 UTR3 Human protein_coding chr20:33095794 chr20:33095774 . . 0 hm6A_associated_SNPs_21083 0 0 1 1 33095769 33095792 mRNA hsa-miR-450a ITCH miRanda miRanda
14034 chr20 33096681 33096681 1 + G A rs138059778 33096691 + 33096671 33096711 41 TCCAAATAGAGGTCAGTGAAACAGCTTTTGACATCAGATTT TCCAAATAGAAGTCAGTGAAACAGCTTTTGACATCAGATTT < 41bp 1 0.169553620855326 1 0.00101608037948608 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 11 ITCH ENSG00000078747 UTR3 Human protein_coding chr20:33096691 chr20:33096681 . . 0 hm6A_associated_SNPs_21084 0 0 1 4 33096679 33096699 mRNA hsa-miR-320a ITCH miRanda miRanda
14034 chr20 33096681 33096681 1 + G A rs138059778 33096691 + 33096671 33096711 41 TCCAAATAGAGGTCAGTGAAACAGCTTTTGACATCAGATTT TCCAAATAGAAGTCAGTGAAACAGCTTTTGACATCAGATTT < 41bp 1 0.169553620855326 1 0.00101608037948608 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 11 ITCH ENSG00000078747 UTR3 Human protein_coding chr20:33096691 chr20:33096681 . . 0 hm6A_associated_SNPs_21084 0 0 1 4 33096679 33096699 mRNA hsa-miR-320b ITCH miRanda miRanda
14034 chr20 33096681 33096681 1 + G A rs138059778 33096691 + 33096671 33096711 41 TCCAAATAGAGGTCAGTGAAACAGCTTTTGACATCAGATTT TCCAAATAGAAGTCAGTGAAACAGCTTTTGACATCAGATTT < 41bp 1 0.169553620855326 1 0.00101608037948608 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 11 ITCH ENSG00000078747 UTR3 Human protein_coding chr20:33096691 chr20:33096681 . . 0 hm6A_associated_SNPs_21084 0 0 1 4 33096680 33096699 mRNA hsa-miR-320c ITCH miRanda miRanda
14034 chr20 33096681 33096681 1 + G A rs138059778 33096691 + 33096671 33096711 41 TCCAAATAGAGGTCAGTGAAACAGCTTTTGACATCAGATTT TCCAAATAGAAGTCAGTGAAACAGCTTTTGACATCAGATTT < 41bp 1 0.169553620855326 1 0.00101608037948608 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 11 ITCH ENSG00000078747 UTR3 Human protein_coding chr20:33096691 chr20:33096681 . . 0 hm6A_associated_SNPs_21084 0 0 1 4 33096681 33096699 mRNA hsa-miR-320d ITCH miRanda miRanda
14034 chr20 33764978 33764978 1 + C T rs115542162 33764968 + 33764948 33764988 41 TGAGGCGTTCAAAAGATATAACCAAATAAACAAGTCATCCA TGAGGCGTTCAAAAGATATAACCAAATAAATAAGTCATCCA < 41bp 1 0.0695507876672153 1 0.412227898836136 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 PROCR ENSG00000101000 UTR3 Human protein_coding chr20:33764968 chr20:33764978 . . 0 hm6A_associated_SNPs_21086 0 0 0 2 33764965 33764988 mRNA hsa-miR-7 PROCR miRanda miRanda
14034 chr20 33764978 33764978 1 + C T rs115542162 33764968 + 33764948 33764988 41 TGAGGCGTTCAAAAGATATAACCAAATAAACAAGTCATCCA TGAGGCGTTCAAAAGATATAACCAAATAAATAAGTCATCCA < 41bp 1 0.0695507876672153 1 0.412227898836136 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 PROCR ENSG00000101000 UTR3 Human protein_coding chr20:33764968 chr20:33764978 . . 0 hm6A_associated_SNPs_21086 0 0 0 2 33764974 33764994 mRNA hsa-miR-219-5p PROCR miRanda miRanda
14034 chr20 33764978 33764978 1 + C T rs115542162 33764977 + 33764957 33764997 41 CAAAAGATATAACCAAATAAACAAGTCATCCACAATCAAAA CAAAAGATATAACCAAATAAATAAGTCATCCACAATCAAAA Direct Loss 1 0.355414414821252 1 0.342499971389771 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 PROCR ENSG00000101000 UTR3 Human protein_coding chr20:33764977 chr20:33764978 . . 0 hm6A_associated_SNPs_21087 0 0 0 2 33764965 33764988 mRNA hsa-miR-7 PROCR miRanda miRanda
14034 chr20 33764978 33764978 1 + C T rs115542162 33764977 + 33764957 33764997 41 CAAAAGATATAACCAAATAAACAAGTCATCCACAATCAAAA CAAAAGATATAACCAAATAAATAAGTCATCCACAATCAAAA Direct Loss 1 0.355414414821252 1 0.342499971389771 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 PROCR ENSG00000101000 UTR3 Human protein_coding chr20:33764977 chr20:33764978 . . 0 hm6A_associated_SNPs_21087 0 0 0 2 33764974 33764994 mRNA hsa-miR-219-5p PROCR miRanda miRanda
14034 chr20 34843757 34843757 1 + C T rs11905241 34843752 + 34843732 34843772 41 TTACTTCTTCCCATCCTGGGACCTGCCAGGGCAGCAATCTC TTACTTCTTCCCATCCTGGGACCTGTCAGGGCAGCAATCTC < 41bp 1 0.781167375009977 1 0.980576634407043 experiment 0.437665249980046 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 26 AAR2 ENSG00000131043 UTR3 Human protein_coding chr20:34843752 chr20:34843757 . . 0 hm6A_associated_SNPs_21104 0 0 1 1 34843756 34843776 mRNA hsa-miR-185 C20orf4 miRanda miRanda
14034 chr20 35220294 35220294 1 + C T rs140265869 35220292 + 35220272 35220312 41 AACCCAGTGGATGTAACAGAACCGACTCCAGTTGAATGTTT AACCCAGTGGATGTAACAGAACTGACTCCAGTTGAATGTTT < 41bp 1 0.711905235746598 1 0.948174476623535 experiment 0.576189528506804 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 TGIF2 ENSG00000259716 ncRNA_intronic Human other chr20:35220292 chr20:35220294 . . 0 hm6A_associated_SNPs_21109 0 0 1 5 35220288 35220311 mRNA hsa-miR-181a TGIF2 miRanda miRanda
14034 chr20 35220294 35220294 1 + C T rs140265869 35220292 + 35220272 35220312 41 AACCCAGTGGATGTAACAGAACCGACTCCAGTTGAATGTTT AACCCAGTGGATGTAACAGAACTGACTCCAGTTGAATGTTT < 41bp 1 0.711905235746598 1 0.948174476623535 experiment 0.576189528506804 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 TGIF2 ENSG00000259716 ncRNA_intronic Human other chr20:35220292 chr20:35220294 . . 0 hm6A_associated_SNPs_21109 0 0 1 5 35220288 35220311 mRNA hsa-miR-181b TGIF2 miRanda miRanda
14034 chr20 35220294 35220294 1 + C T rs140265869 35220292 + 35220272 35220312 41 AACCCAGTGGATGTAACAGAACCGACTCCAGTTGAATGTTT AACCCAGTGGATGTAACAGAACTGACTCCAGTTGAATGTTT < 41bp 1 0.711905235746598 1 0.948174476623535 experiment 0.576189528506804 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 TGIF2 ENSG00000259716 ncRNA_intronic Human other chr20:35220292 chr20:35220294 . . 0 hm6A_associated_SNPs_21109 0 0 1 5 35220288 35220311 mRNA hsa-miR-181c TGIF2 miRanda miRanda
14034 chr20 35220294 35220294 1 + C T rs140265869 35220292 + 35220272 35220312 41 AACCCAGTGGATGTAACAGAACCGACTCCAGTTGAATGTTT AACCCAGTGGATGTAACAGAACTGACTCCAGTTGAATGTTT < 41bp 1 0.711905235746598 1 0.948174476623535 experiment 0.576189528506804 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 TGIF2 ENSG00000259716 ncRNA_intronic Human other chr20:35220292 chr20:35220294 . . 0 hm6A_associated_SNPs_21109 0 0 1 5 35220288 35220311 mRNA hsa-miR-181d TGIF2 miRanda miRanda
14034 chr20 35220294 35220294 1 + C T rs140265869 35220292 + 35220272 35220312 41 AACCCAGTGGATGTAACAGAACCGACTCCAGTTGAATGTTT AACCCAGTGGATGTAACAGAACTGACTCCAGTTGAATGTTT < 41bp 1 0.711905235746598 1 0.948174476623535 experiment 0.576189528506804 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 TGIF2 ENSG00000259716 ncRNA_intronic Human other chr20:35220292 chr20:35220294 . . 0 hm6A_associated_SNPs_21109 0 0 1 5 35220288 35220312 mRNA hsa-miR-543 TGIF2 miRanda miRanda
14034 chr20 35869925 35869925 1 + T C rs561286946 35869921 + 35869901 35869941 41 TCAGATAGTCTCTTTCTCTGACACTGTGTAAGAAGCTGTGA TCAGATAGTCTCTTTCTCTGACACCGTGTAAGAAGCTGTGA < 41bp 1 0.576446992499703 1 0.00987142324447632 experiment 0.847106015000594 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 RPN2 ENSG00000118705 UTR3 Human protein_coding chr20:35869921 chr20:35869925 . . 0 hm6A_associated_SNPs_21113 0 0 1 4 35869922 35869942 mRNA hsa-miR-27a RPN2 miRanda miRanda
14034 chr20 35869925 35869925 1 + T C rs561286946 35869921 + 35869901 35869941 41 TCAGATAGTCTCTTTCTCTGACACTGTGTAAGAAGCTGTGA TCAGATAGTCTCTTTCTCTGACACCGTGTAAGAAGCTGTGA < 41bp 1 0.576446992499703 1 0.00987142324447632 experiment 0.847106015000594 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 RPN2 ENSG00000118705 UTR3 Human protein_coding chr20:35869921 chr20:35869925 . . 0 hm6A_associated_SNPs_21113 0 0 1 4 35869922 35869942 mRNA hsa-miR-27b RPN2 miRanda miRanda
14034 chr20 35869925 35869925 1 + T C rs561286946 35869921 + 35869901 35869941 41 TCAGATAGTCTCTTTCTCTGACACTGTGTAAGAAGCTGTGA TCAGATAGTCTCTTTCTCTGACACCGTGTAAGAAGCTGTGA < 41bp 1 0.576446992499703 1 0.00987142324447632 experiment 0.847106015000594 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 RPN2 ENSG00000118705 UTR3 Human protein_coding chr20:35869921 chr20:35869925 . . 0 hm6A_associated_SNPs_21113 0 0 1 4 35869909 35869929 mRNA hsa-miR-128 RPN2 miRanda miRanda
14034 chr20 35869925 35869925 1 + T C rs561286946 35869921 + 35869901 35869941 41 TCAGATAGTCTCTTTCTCTGACACTGTGTAAGAAGCTGTGA TCAGATAGTCTCTTTCTCTGACACCGTGTAAGAAGCTGTGA < 41bp 1 0.576446992499703 1 0.00987142324447632 experiment 0.847106015000594 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 RPN2 ENSG00000118705 UTR3 Human protein_coding chr20:35869921 chr20:35869925 . . 0 hm6A_associated_SNPs_21113 0 0 1 4 35869904 35869927 mRNA hsa-miR-152 RPN2 miRanda miRanda
14034 chr20 35929733 35929733 1 + C T rs139446010 35929741 + 35929721 35929761 41 GAGAACCTGCTACGGTACGGACTCTTCCTGGGAGCCATCTT GAGAACCTGCTATGGTACGGACTCTTCCTGGGAGCCATCTT < 41bp 1 0.518367893603515 1 0.887111663818359 experiment 0.96326421279297 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 MANBAL ENSG00000101363 CDS Human protein_coding chr20:35929741 chr20:35929733 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_21114 0 0 1 1 35929720 35929740 mRNA hsa-miR-126 MANBAL miRanda miRanda
14034 chr20 37549499 37549499 1 + G A rs146744489 37549516 + 37549496 37549536 41 CACGTACCATTGGCTGTAAAACAGTATGAGCCCAGACTGAC CACATACCATTGGCTGTAAAACAGTATGAGCCCAGACTGAC < 41bp 1 0.128203439026122 1 0.069842517375946 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 4 PPP1R16B ENSG00000101445 UTR3 Human protein_coding chr20:37549516 chr20:37549499 . . 0 hm6A_associated_SNPs_21134 0 0 0 1 37549480 37549503 mRNA hsa-miR-142-3p PPP1R16B miRanda miRanda
14034 chr20 37581378 37581378 1 + T C rs142770945 37581368 + 37581348 37581388 41 GTATTGGTTTTATGGTTTAAACACTATGGATACAGGGGTTT GTATTGGTTTTATGGTTTAAACACTATGGACACAGGGGTTT < 41bp 1 0.563146506782047 1 0.819290280342102 experiment 0.873706986435906 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 FAM83D ENSG00000101447 UTR3 Human protein_coding chr20:37581368 chr20:37581378 . . 0 hm6A_associated_SNPs_21137 0 0 1 7 37581376 37581398 mRNA hsa-miR-19a FAM83D miRanda miRanda
14034 chr20 37581378 37581378 1 + T C rs142770945 37581368 + 37581348 37581388 41 GTATTGGTTTTATGGTTTAAACACTATGGATACAGGGGTTT GTATTGGTTTTATGGTTTAAACACTATGGACACAGGGGTTT < 41bp 1 0.563146506782047 1 0.819290280342102 experiment 0.873706986435906 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 FAM83D ENSG00000101447 UTR3 Human protein_coding chr20:37581368 chr20:37581378 . . 0 hm6A_associated_SNPs_21137 0 0 1 7 37581376 37581398 mRNA hsa-miR-19b FAM83D miRanda miRanda
14034 chr20 37581378 37581378 1 + T C rs142770945 37581368 + 37581348 37581388 41 GTATTGGTTTTATGGTTTAAACACTATGGATACAGGGGTTT GTATTGGTTTTATGGTTTAAACACTATGGACACAGGGGTTT < 41bp 1 0.563146506782047 1 0.819290280342102 experiment 0.873706986435906 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 FAM83D ENSG00000101447 UTR3 Human protein_coding chr20:37581368 chr20:37581378 . . 0 hm6A_associated_SNPs_21137 0 0 1 7 37581378 37581399 mRNA hsa-miR-130a FAM83D miRanda miRanda
14034 chr20 37581378 37581378 1 + T C rs142770945 37581368 + 37581348 37581388 41 GTATTGGTTTTATGGTTTAAACACTATGGATACAGGGGTTT GTATTGGTTTTATGGTTTAAACACTATGGACACAGGGGTTT < 41bp 1 0.563146506782047 1 0.819290280342102 experiment 0.873706986435906 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 FAM83D ENSG00000101447 UTR3 Human protein_coding chr20:37581368 chr20:37581378 . . 0 hm6A_associated_SNPs_21137 0 0 1 7 37581378 37581399 mRNA hsa-miR-301a FAM83D miRanda miRanda
14034 chr20 37581378 37581378 1 + T C rs142770945 37581368 + 37581348 37581388 41 GTATTGGTTTTATGGTTTAAACACTATGGATACAGGGGTTT GTATTGGTTTTATGGTTTAAACACTATGGACACAGGGGTTT < 41bp 1 0.563146506782047 1 0.819290280342102 experiment 0.873706986435906 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 FAM83D ENSG00000101447 UTR3 Human protein_coding chr20:37581368 chr20:37581378 . . 0 hm6A_associated_SNPs_21137 0 0 1 7 37581371 37581392 mRNA hsa-miR-495 FAM83D miRanda miRanda
14034 chr20 37581378 37581378 1 + T C rs142770945 37581368 + 37581348 37581388 41 GTATTGGTTTTATGGTTTAAACACTATGGATACAGGGGTTT GTATTGGTTTTATGGTTTAAACACTATGGACACAGGGGTTT < 41bp 1 0.563146506782047 1 0.819290280342102 experiment 0.873706986435906 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 FAM83D ENSG00000101447 UTR3 Human protein_coding chr20:37581368 chr20:37581378 . . 0 hm6A_associated_SNPs_21137 0 0 1 7 37581377 37581399 mRNA hsa-miR-454 FAM83D miRanda miRanda
14034 chr20 37581378 37581378 1 + T C rs142770945 37581368 + 37581348 37581388 41 GTATTGGTTTTATGGTTTAAACACTATGGATACAGGGGTTT GTATTGGTTTTATGGTTTAAACACTATGGACACAGGGGTTT < 41bp 1 0.563146506782047 1 0.819290280342102 experiment 0.873706986435906 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 FAM83D ENSG00000101447 UTR3 Human protein_coding chr20:37581368 chr20:37581378 . . 0 hm6A_associated_SNPs_21137 0 0 1 7 37581378 37581399 mRNA hsa-miR-301b FAM83D miRanda miRanda
14034 chr20 42089710 42089710 1 + A G rs187173558 42089703 + 42089683 42089723 41 AGGTCGAGTTCCAGAGATTAACTCAGAACTCCTTGTTTGCA AGGTCGAGTTCCAGAGATTAACTCAGAGCTCCTTGTTTGCA < 41bp 1 0.723773195964752 1 0.955718636512756 experiment 0.552453608070497 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 SRSF6 ENSG00000124193 UTR3 Human protein_coding chr20:42089703 chr20:42089710 . . 0 hm6A_associated_SNPs_21151 0 0 1 2 42089704 42089725 mRNA hsa-miR-19a SFRS6 miRanda miRanda
14034 chr20 42089710 42089710 1 + A G rs187173558 42089703 + 42089683 42089723 41 AGGTCGAGTTCCAGAGATTAACTCAGAACTCCTTGTTTGCA AGGTCGAGTTCCAGAGATTAACTCAGAGCTCCTTGTTTGCA < 41bp 1 0.723773195964752 1 0.955718636512756 experiment 0.552453608070497 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 28 SRSF6 ENSG00000124193 UTR3 Human protein_coding chr20:42089703 chr20:42089710 . . 0 hm6A_associated_SNPs_21151 0 0 1 2 42089705 42089725 mRNA hsa-miR-19b SFRS6 miRanda miRanda
14034 chr20 42090289 42090289 1 + G A rs150653426 42090285 + 42090265 42090305 41 TAAATTCTACTTAAGTGTAAACAAGGCAAGCCTCAGACCAG TAAATTCTACTTAAGTGTAAACAAAGCAAGCCTCAGACCAG < 41bp 1 0.479265433235636 1 0.521283030509949 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SRSF6 ENSG00000124193 UTR3 Human protein_coding chr20:42090285 chr20:42090289 . . 0 hm6A_associated_SNPs_21155 0 0 1 1 42090289 42090311 mRNA hsa-miR-137 SFRS6 miRanda miRanda
14034 chr20 42169725 42169725 1 + A C rs6030948 42169738 + 42169718 42169758 41 CCCACTCATTTGCTTGCCAAACTTAGCTTTGCCAGTGATAG CCCACTCCTTTGCTTGCCAAACTTAGCTTTGCCAGTGATAG < 41bp 1 0.205575798612179 1 0.077842503786087 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 L3MBTL1 ENSG00000185513 CDS Human protein_coding chr20:42169738 chr20:42169725 nonsynonymous SNV 0.007 0 hm6A_associated_SNPs_21163 0 0 0 2 42169716 42169736 mRNA hsa-miR-31 L3MBTL miRanda miRanda
14034 chr20 42169725 42169725 1 + A C rs6030948 42169738 + 42169718 42169758 41 CCCACTCATTTGCTTGCCAAACTTAGCTTTGCCAGTGATAG CCCACTCCTTTGCTTGCCAAACTTAGCTTTGCCAGTGATAG < 41bp 1 0.205575798612179 1 0.077842503786087 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 L3MBTL1 ENSG00000185513 CDS Human protein_coding chr20:42169738 chr20:42169725 nonsynonymous SNV 0.007 0 hm6A_associated_SNPs_21163 0 0 0 2 42169717 42169738 mRNA hsa-miR-182 L3MBTL miRanda miRanda
14034 chr20 42214227 42214227 1 + T C rs140791202 42214220 + 42214200 42214240 41 TGATCTCAATGTGTAAAATGACAGAGATGTAACAAGCTCAT TGATCTCAATGTGTAAAATGACAGAGACGTAACAAGCTCAT < 41bp 1 0.053685223452206 1 0.0559898912906647 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 28 SGK2 ENSG00000101049 UTR3 Human protein_coding chr20:42214220 chr20:42214227 . . 0 hm6A_associated_SNPs_21164 0 0 0 2 42214218 42214241 mRNA hsa-miR-135a SGK2 miRanda miRanda
14034 chr20 42214227 42214227 1 + T C rs140791202 42214220 + 42214200 42214240 41 TGATCTCAATGTGTAAAATGACAGAGATGTAACAAGCTCAT TGATCTCAATGTGTAAAATGACAGAGACGTAACAAGCTCAT < 41bp 1 0.053685223452206 1 0.0559898912906647 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 28 SGK2 ENSG00000101049 UTR3 Human protein_coding chr20:42214220 chr20:42214227 . . 0 hm6A_associated_SNPs_21164 0 0 0 2 42214218 42214241 mRNA hsa-miR-135b SGK2 miRanda miRanda
14034 chr20 43058460 43058460 1 + G A rs41280258 43058447 + 43058427 43058467 41 GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATC GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGACCACATC < 41bp 1 0.204176499310845 1 0.970667481422424 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control 34 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058447 chr20:43058460 . . 0 hm6A_associated_SNPs_21177 2 0 1 5 43058455 43058476 mRNA hsa-miR-34a HNF4A miRanda miRanda
14034 chr20 43058460 43058460 1 + G A rs41280258 43058447 + 43058427 43058467 41 GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATC GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGACCACATC < 41bp 1 0.204176499310845 1 0.970667481422424 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control 34 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058447 chr20:43058460 . . 0 hm6A_associated_SNPs_21177 2 0 1 5 43058453 43058476 mRNA hsa-miR-34c-5p HNF4A miRanda miRanda
14034 chr20 43058460 43058460 1 + G A rs41280258 43058447 + 43058427 43058467 41 GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATC GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGACCACATC < 41bp 1 0.204176499310845 1 0.970667481422424 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control 34 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058447 chr20:43058460 . . 0 hm6A_associated_SNPs_21177 2 0 1 5 43058444 43058464 mRNA hsa-miR-328 HNF4A miRanda miRanda
14034 chr20 43058460 43058460 1 + G A rs41280258 43058447 + 43058427 43058467 41 GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATC GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGACCACATC < 41bp 1 0.204176499310845 1 0.970667481422424 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control 34 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058447 chr20:43058460 . . 0 hm6A_associated_SNPs_21177 2 0 1 5 43058455 43058476 mRNA hsa-miR-449a HNF4A miRanda miRanda
14034 chr20 43058460 43058460 1 + G A rs41280258 43058447 + 43058427 43058467 41 GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATC GAAGGATGAAGGGCCCGAGAACATGGCCTAAGGACCACATC < 41bp 1 0.204176499310845 1 0.970667481422424 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control 34 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058447 chr20:43058460 . . 0 hm6A_associated_SNPs_21177 2 0 1 5 43058455 43058476 mRNA hsa-miR-449b HNF4A miRanda miRanda
14034 chr20 43058547 43058547 1 + T C rs41282030 43058537 + 43058517 43058557 41 GGAGACCTCTACTGCCTTGGACAACTTTTCTCATGTTGAAG GGAGACCTCTACTGCCTTGGACAACTTTTCCCATGTTGAAG < 41bp 1 0.359329851793643 1 0.985092401504517 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058537 chr20:43058547 . . 0 hm6A_associated_SNPs_21178 2 0 1 6 43058543 43058566 mRNA hsa-miR-34a HNF4A miRanda miRanda
14034 chr20 43058547 43058547 1 + T C rs41282030 43058537 + 43058517 43058557 41 GGAGACCTCTACTGCCTTGGACAACTTTTCTCATGTTGAAG GGAGACCTCTACTGCCTTGGACAACTTTTCCCATGTTGAAG < 41bp 1 0.359329851793643 1 0.985092401504517 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058537 chr20:43058547 . . 0 hm6A_associated_SNPs_21178 2 0 1 6 43058543 43058566 mRNA hsa-miR-34c-5p HNF4A miRanda miRanda
14034 chr20 43058547 43058547 1 + T C rs41282030 43058537 + 43058517 43058557 41 GGAGACCTCTACTGCCTTGGACAACTTTTCTCATGTTGAAG GGAGACCTCTACTGCCTTGGACAACTTTTCCCATGTTGAAG < 41bp 1 0.359329851793643 1 0.985092401504517 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058537 chr20:43058547 . . 0 hm6A_associated_SNPs_21178 2 0 1 6 43058531 43058553 mRNA hsa-miR-376c HNF4A miRanda miRanda
14034 chr20 43058547 43058547 1 + T C rs41282030 43058537 + 43058517 43058557 41 GGAGACCTCTACTGCCTTGGACAACTTTTCTCATGTTGAAG GGAGACCTCTACTGCCTTGGACAACTTTTCCCATGTTGAAG < 41bp 1 0.359329851793643 1 0.985092401504517 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058537 chr20:43058547 . . 0 hm6A_associated_SNPs_21178 2 0 1 6 43058545 43058566 mRNA hsa-miR-449a HNF4A miRanda miRanda
14034 chr20 43058547 43058547 1 + T C rs41282030 43058537 + 43058517 43058557 41 GGAGACCTCTACTGCCTTGGACAACTTTTCTCATGTTGAAG GGAGACCTCTACTGCCTTGGACAACTTTTCCCATGTTGAAG < 41bp 1 0.359329851793643 1 0.985092401504517 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058537 chr20:43058547 . . 0 hm6A_associated_SNPs_21178 2 0 1 6 43058545 43058566 mRNA hsa-miR-449b HNF4A miRanda miRanda
14034 chr20 43058547 43058547 1 + T C rs41282030 43058537 + 43058517 43058557 41 GGAGACCTCTACTGCCTTGGACAACTTTTCTCATGTTGAAG GGAGACCTCTACTGCCTTGGACAACTTTTCCCATGTTGAAG < 41bp 1 0.359329851793643 1 0.985092401504517 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 HNF4A ENSG00000101076 UTR3 Human protein_coding chr20:43058537 chr20:43058547 . . 0 hm6A_associated_SNPs_21178 2 0 1 6 43058533 43058556 mRNA hsa-miR-421 HNF4A miRanda miRanda
14034 chr20 43247475 43247475 1 + T G rs76116712 43247487 + 43247467 43247507 41 AGCAGATATGGAGAGAGCTGACAATCAATTCACATTTTTTA AGCAGATAGGGAGAGAGCTGACAATCAATTCACATTTTTTA < 41bp 1 0.291635378926939 1 0.165228515863419 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 PKIG ENSG00000168734 UTR3 Human protein_coding chr20:43247487 chr20:43247475 . . 0 hm6A_associated_SNPs_21191 0 0 1 2 43247473 43247493 mRNA hsa-miR-219-5p PKIG miRanda miRanda
14034 chr20 43247475 43247475 1 + T G rs76116712 43247487 + 43247467 43247507 41 AGCAGATATGGAGAGAGCTGACAATCAATTCACATTTTTTA AGCAGATAGGGAGAGAGCTGACAATCAATTCACATTTTTTA < 41bp 1 0.291635378926939 1 0.165228515863419 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 PKIG ENSG00000168734 UTR3 Human protein_coding chr20:43247487 chr20:43247475 . . 0 hm6A_associated_SNPs_21191 0 0 1 2 43247452 43247475 mRNA hsa-miR-137 PKIG miRanda miRanda
14034 chr20 43535225 43535225 1 + A G rs114425623 43535234 + 43535214 43535254 41 AAAAATGGTTCATGGGATAAACAGCTGGTATTTGTATCTAA AAAAATGGTTCGTGGGATAAACAGCTGGTATTTGTATCTAA < 41bp 1 0.777291325138662 1 0.836150527000427 experiment 0.445417349722677 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 12 YWHAB ENSG00000166913 UTR3 Human protein_coding chr20:43535234 chr20:43535225 . . 0 hm6A_associated_SNPs_21198 0 0 1 1 43535219 43535242 mRNA hsa-miR-199b-5p YWHAB miRanda miRanda
14034 chr20 43566787 43566787 1 + A G rs11780 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA GGGCATGCTGCTGGAGATTGACAACTCGGAGCTGTTGCTCA < 41bp 1 0.59289371872803 1 0.822521209716797 experiment 0.81421256254394 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566787 nonsynonymous SNV 0.949 1 hm6A_associated_SNPs_21208 0 0 1 1 43566786 43566807 mRNA hsa-miR-338-3p PABPC1L miRanda miRanda
14034 chr20 43566791 43566791 1 + C T rs61736211 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA GGGCATGCTGCTGGAGATTGACAACTCAGAGTTGTTGCTCA < 41bp 1 0.547758430590583 1 0.696150898933411 experiment 0.904483138818835 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566791 synonymous SNV . 0 hm6A_associated_SNPs_21209 0 0 1 1 43566786 43566807 mRNA hsa-miR-338-3p PABPC1L miRanda miRanda
14034 chr20 43706608 43706608 1 + T C rs377446019 43706598 + 43706578 43706618 41 TGGATCAGAGAAATTTCCTGACAAGGTATATTTGTTTTCTA TGGATCAGAGAAATTTCCTGACAAGGTATACTTGTTTTCTA < 41bp 1 0.222846423444882 1 0.00844267010688782 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 STK4 ENSG00000101109 UTR3 Human protein_coding chr20:43706598 chr20:43706608 . . 0 hm6A_associated_SNPs_21218 0 0 1 2 43706601 43706623 mRNA hsa-miR-376a STK4 miRanda miRanda
14034 chr20 43706608 43706608 1 + T C rs377446019 43706598 + 43706578 43706618 41 TGGATCAGAGAAATTTCCTGACAAGGTATATTTGTTTTCTA TGGATCAGAGAAATTTCCTGACAAGGTATACTTGTTTTCTA < 41bp 1 0.222846423444882 1 0.00844267010688782 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 STK4 ENSG00000101109 UTR3 Human protein_coding chr20:43706598 chr20:43706608 . . 0 hm6A_associated_SNPs_21218 0 0 1 2 43706600 43706623 mRNA hsa-miR-376b STK4 miRanda miRanda
14034 chr20 43706608 43706608 1 + T C rs377446019 43706622 + 43706602 43706642 41 GGTATATTTGTTTTCTAGTGACAGAAAGGCAAAGGAACAAG GGTATACTTGTTTTCTAGTGACAGAAAGGCAAAGGAACAAG < 41bp 1 0.261145467723919 1 0.0167486369609833 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 STK4 ENSG00000101109 UTR3 Human protein_coding chr20:43706622 chr20:43706608 . . 0 hm6A_associated_SNPs_21219 0 0 1 2 43706601 43706623 mRNA hsa-miR-376a STK4 miRanda miRanda
14034 chr20 43706608 43706608 1 + T C rs377446019 43706622 + 43706602 43706642 41 GGTATATTTGTTTTCTAGTGACAGAAAGGCAAAGGAACAAG GGTATACTTGTTTTCTAGTGACAGAAAGGCAAAGGAACAAG < 41bp 1 0.261145467723919 1 0.0167486369609833 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 STK4 ENSG00000101109 UTR3 Human protein_coding chr20:43706622 chr20:43706608 . . 0 hm6A_associated_SNPs_21219 0 0 1 2 43706600 43706623 mRNA hsa-miR-376b STK4 miRanda miRanda
14034 chr20 43996454 43996454 1 + G T rs2743430 43996447 + 43996427 43996467 41 TCAACATAGCAGGCCATAGGACCCAGAGAAGAATCCCAGCG TCAACATAGCAGGCCATAGGACCCAGATAAGAATCCCAGCG < 41bp 1 0.621021625200145 1 0.537912249565125 experiment 0.757956749599709 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 SYS1-DBNDD2 ENSG00000204070 UTR3 Human protein_coding chr20:43996447 chr20:43996454 . . 0 hm6A_associated_SNPs_21222 0 0 0 3 43996452 43996476 mRNA hsa-miR-182 SYS1 miRanda miRanda
14034 chr20 43996454 43996454 1 + G T rs2743430 43996447 + 43996427 43996467 41 TCAACATAGCAGGCCATAGGACCCAGAGAAGAATCCCAGCG TCAACATAGCAGGCCATAGGACCCAGATAAGAATCCCAGCG < 41bp 1 0.621021625200145 1 0.537912249565125 experiment 0.757956749599709 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 SYS1-DBNDD2 ENSG00000204070 UTR3 Human protein_coding chr20:43996447 chr20:43996454 . . 0 hm6A_associated_SNPs_21222 0 0 0 3 43996433 43996455 mRNA hsa-miR-330-5p SYS1 miRanda miRanda
14034 chr20 43996454 43996454 1 + G T rs2743430 43996447 + 43996427 43996467 41 TCAACATAGCAGGCCATAGGACCCAGAGAAGAATCCCAGCG TCAACATAGCAGGCCATAGGACCCAGATAAGAATCCCAGCG < 41bp 1 0.621021625200145 1 0.537912249565125 experiment 0.757956749599709 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 SYS1-DBNDD2 ENSG00000204070 UTR3 Human protein_coding chr20:43996447 chr20:43996454 . . 0 hm6A_associated_SNPs_21222 0 0 0 3 43996436 43996455 mRNA hsa-miR-326 SYS1 miRanda miRanda
14034 chr20 43996466 43996466 1 + C T rs707576 43996447 + 43996427 43996467 41 TCAACATAGCAGGCCATAGGACCCAGAGAAGAATCCCAGCG TCAACATAGCAGGCCATAGGACCCAGAGAAGAATCCCAGTG < 41bp 1 0.609617685352749 1 0.664756059646606 experiment 0.780764629294503 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 40 SYS1-DBNDD2 ENSG00000204070 UTR3 Human protein_coding chr20:43996447 chr20:43996466 . . 0 hm6A_associated_SNPs_21223 0 0 1 1 43996452 43996476 mRNA hsa-miR-182 SYS1 miRanda miRanda
14034 chr20 43996466 43996466 1 + C T rs707576 43996482 + 43996462 43996502 41 CCAGCGTTGCTCAAAGTCTAACCATCATAAAGACACTGCCT CCAGTGTTGCTCAAAGTCTAACCATCATAAAGACACTGCCT < 41bp 1 0.384850857153814 1 0.499460816383362 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 SYS1-DBNDD2 ENSG00000204070 UTR3 Human protein_coding chr20:43996482 chr20:43996466 . . 0 hm6A_associated_SNPs_21224 0 0 1 1 43996452 43996476 mRNA hsa-miR-182 SYS1 miRanda miRanda
14034 chr20 44038810 44038810 1 + G A rs367788273 44038805 + 44038785 44038825 41 GGGCCCCTGCCTACAGACTGACCACGCTGGCTATTCTCCAC GGGCCCCTGCCTACAGACTGACCACACTGGCTATTCTCCAC < 41bp 1 0.49954755627258 1 0.96100789308548 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44038805 chr20:44038810 . . 0 hm6A_associated_SNPs_21227 0 0 1 2 44038795 44038817 mRNA hsa-miR-503 DBNDD2 miRanda miRanda
14034 chr20 44038810 44038810 1 + G A rs367788273 44038805 + 44038785 44038825 41 GGGCCCCTGCCTACAGACTGACCACGCTGGCTATTCTCCAC GGGCCCCTGCCTACAGACTGACCACACTGGCTATTCTCCAC < 41bp 1 0.49954755627258 1 0.96100789308548 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44038805 chr20:44038810 . . 0 hm6A_associated_SNPs_21227 0 0 1 2 44038795 44038817 mRNA hsa-miR-503 SYS1-DBNDD2 miRanda miRanda
14034 chr20 44039094 44039094 1 + G A rs571990985 44039086 + 44039066 44039106 41 AGCACTCTTCCCTCCCCTAAACCATCCCGTAGTCTTCTAAT AGCACTCTTCCCTCCCCTAAACCATCCCATAGTCTTCTAAT < 41bp 1 0.158267159645079 1 0.0956724286079407 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 29 SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44039086 chr20:44039094 . . 0 hm6A_associated_SNPs_21229 0 0 1 2 44039079 44039104 mRNA hsa-miR-7 DBNDD2 miRanda miRanda
14034 chr20 44039094 44039094 1 + G A rs571990985 44039086 + 44039066 44039106 41 AGCACTCTTCCCTCCCCTAAACCATCCCGTAGTCTTCTAAT AGCACTCTTCCCTCCCCTAAACCATCCCATAGTCTTCTAAT < 41bp 1 0.158267159645079 1 0.0956724286079407 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 29 SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44039086 chr20:44039094 . . 0 hm6A_associated_SNPs_21229 0 0 1 2 44039079 44039104 mRNA hsa-miR-7 SYS1-DBNDD2 miRanda miRanda
14034 chr20 44039230 44039230 1 + C G rs570107770 44039229 + 44039209 44039249 41 GAGCACGGTATAAATAATAAACTAATAATAATATGCCAACC GAGCACGGTATAAATAATAAAGTAATAATAATATGCCAACC Direct Loss 1 0.0672440579715549 1 0.0425050854682922 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44039229 chr20:44039230 . . 0 hm6A_associated_SNPs_21231 0 0 1 2 44039226 44039245 mRNA hsa-miR-448 DBNDD2 miRanda miRanda
14034 chr20 44039230 44039230 1 + C G rs570107770 44039229 + 44039209 44039249 41 GAGCACGGTATAAATAATAAACTAATAATAATATGCCAACC GAGCACGGTATAAATAATAAAGTAATAATAATATGCCAACC Direct Loss 1 0.0672440579715549 1 0.0425050854682922 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44039229 chr20:44039230 . . 0 hm6A_associated_SNPs_21231 0 0 1 2 44039226 44039245 mRNA hsa-miR-448 SYS1-DBNDD2 miRanda miRanda
14034 chr20 48930151 48930151 1 + G C rs116691274 48930158 + 48930138 48930178 41 CAGAGCTGGACAGGCTTTGAACTCCTGGATCCCACTGTACC CAGAGCTGGACAGCCTTTGAACTCCTGGATCCCACTGTACC < 41bp 1 0.371649721848691 1 0.929257154464722 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 LINC01270;LINC01271 ENSG00000203999;ENSG00000233077 ncRNA_exonic Human other chr20:48930158 chr20:48930151 . . 0 hm6A_associated_SNPs_21258 0 0 0 2 48930130 48930153 lncRNA hsa-miR-214-5p LINC01270 miRanda starBase2
14034 chr20 48930151 48930151 1 + G C rs116691274 48930158 + 48930138 48930178 41 CAGAGCTGGACAGGCTTTGAACTCCTGGATCCCACTGTACC CAGAGCTGGACAGCCTTTGAACTCCTGGATCCCACTGTACC < 41bp 1 0.371649721848691 1 0.929257154464722 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 LINC01270;LINC01271 ENSG00000203999;ENSG00000233077 ncRNA_exonic Human other chr20:48930158 chr20:48930151 . . 0 hm6A_associated_SNPs_21258 0 0 0 2 48930147 48930166 lncRNA hsa-miR-665 LINC01270 miRanda starBase2
14034 chr20 49200402 49200402 1 + C A rs17847903 49200387 + 49200367 49200407 41 CATGATTTAGGGAAGCAGGGACACCCCCCGCCCCCCACCTT CATGATTTAGGGAAGCAGGGACACCCCCCGCCCCCAACCTT < 41bp 1 0.607720809502946 1 0.135056018829346 experiment 0.784558380994108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 PTPN1 ENSG00000196396 UTR3 Human protein_coding chr20:49200387 chr20:49200402 . . 0 hm6A_associated_SNPs_21263 0 0 1 1 49200400 49200421 mRNA hsa-miR-485-5p PTPN1 miRanda miRanda
14034 chr20 54979035 54979035 1 + G A rs16979884 54979042 + 54979022 54979062 41 ATCGGTTTTGTAAGTACAGGACTTGCCGTTTCTTTTGATCT ATCGGTTTTGTAAATACAGGACTTGCCGTTTCTTTTGATCT < 41bp 1 0.735199954216925 1 0.9259934425354 experiment 0.529600091566151 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 CSTF1 ENSG00000101138 UTR3 Human protein_coding chr20:54979042 chr20:54979035 . . 0 hm6A_associated_SNPs_21275 0 0 1 1 54979022 54979042 mRNA hsa-miR-486-5p CSTF1 miRanda miRanda
14034 chr20 55093658 55093658 1 + A G rs147621647 55093668 + 55093648 55093688 41 GAGTTGGCACATATTAATTAACTAAAATTCTAATGATCTTG GAGTTGGCACGTATTAATTAACTAAAATTCTAATGATCTTG < 41bp 1 0.23177836483243 1 0.856015801429749 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 RTFDC1 ENSG00000022277 UTR3 Human protein_coding chr20:55093668 chr20:55093658 . . 0 hm6A_associated_SNPs_21282 0 0 1 1 55093636 55093660 mRNA hsa-miR-455-5p C20orf43 miRanda miRanda
14034 chr20 57478846 57478846 1 + C G rs11554266 57478830 + 57478810 57478850 41 GAGTGTGATGAACGTGCCTGACTTTGACTTCCCTCCCGTAA GAGTGTGATGAACGTGCCTGACTTTGACTTCCCTCCGGTAA < 41bp 1 0.29260511939846 1 0.937278628349304 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 37 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478830 chr20:57478846 synonymous SNV . 0 hm6A_associated_SNPs_21315 0 0 1 2 57478838 57478846 mRNA hsa-miR-376a GNAS miRanda miRanda
14034 chr20 57478846 57478846 1 + C G rs11554266 57478830 + 57478810 57478850 41 GAGTGTGATGAACGTGCCTGACTTTGACTTCCCTCCCGTAA GAGTGTGATGAACGTGCCTGACTTTGACTTCCCTCCGGTAA < 41bp 1 0.29260511939846 1 0.937278628349304 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 37 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478830 chr20:57478846 synonymous SNV . 0 hm6A_associated_SNPs_21315 0 0 1 2 57478837 57478846 mRNA hsa-miR-376b GNAS miRanda miRanda
14034 chr20 57478846 57478846 1 + C G rs11554266 57478836 + 57478816 57478856 41 GATGAACGTGCCTGACTTTGACTTCCCTCCCGTAAGCTACA GATGAACGTGCCTGACTTTGACTTCCCTCCGGTAAGCTACA < 41bp 1 0.101209278223389 1 0.89890456199646 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478836 chr20:57478846 synonymous SNV . 0 hm6A_associated_SNPs_21316 0 0 1 2 57478838 57478846 mRNA hsa-miR-376a GNAS miRanda miRanda
14034 chr20 57478846 57478846 1 + C G rs11554266 57478836 + 57478816 57478856 41 GATGAACGTGCCTGACTTTGACTTCCCTCCCGTAAGCTACA GATGAACGTGCCTGACTTTGACTTCCCTCCGGTAAGCTACA < 41bp 1 0.101209278223389 1 0.89890456199646 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478836 chr20:57478846 synonymous SNV . 0 hm6A_associated_SNPs_21316 0 0 1 2 57478837 57478846 mRNA hsa-miR-376b GNAS miRanda miRanda
14034 chr20 58422608 58422608 1 + A G rs116408393 58422588 + 58422568 58422608 41 TTCAGTATTATGTTCAAAAGACATTTTTATCCTGATCATAA TTCAGTATTATGTTCAAAAGACATTTTTATCCTGATCATAG < 41bp 1 0.124266119490998 1 0.86003053188324 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 PHACTR3 ENSG00000087495 UTR3 Human protein_coding chr20:58422588 chr20:58422608 . . 0 hm6A_associated_SNPs_21336 0 0 0 1 58422606 58422627 mRNA hsa-miR-186 PHACTR3 miRanda miRanda
14034 chr20 58521606 58521606 1 + G T rs573344141 58521593 + 58521573 58521613 41 TACGTATATAATTATAAAAAACAATGTGCAAGGGTTATATT TACGTATATAATTATAAAAAACAATGTGCAAGGTTTATATT < 41bp 1 0.123771481907379 1 0.0117303133010864 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 34 FAM217B ENSG00000196227 UTR3 Human protein_coding chr20:58521593 chr20:58521606 . . 0 hm6A_associated_SNPs_21337 0 0 0 1 58521593 58521613 mRNA hsa-miR-410 C20orf177 miRanda miRanda
14034 chr20 60757341 60757341 1 + C A rs554330077 60757326 + 60757306 60757346 41 ATAGGGGGCACCCCTTCAAAACTGTACAAAGAAGACGACTG ATAGGGGGCACCCCTTCAAAACTGTACAAAGAAGAAGACTG < 41bp 1 0.0485397489415854 1 0.966986179351807 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 SS18L1 ENSG00000184402 UTR3 Human protein_coding chr20:60757326 chr20:60757341 . . 0 hm6A_associated_SNPs_21345 0 0 1 2 60757328 60757349 mRNA hsa-miR-212 SS18L1 miRanda miRanda
14034 chr20 60757341 60757341 1 + C A rs554330077 60757326 + 60757306 60757346 41 ATAGGGGGCACCCCTTCAAAACTGTACAAAGAAGACGACTG ATAGGGGGCACCCCTTCAAAACTGTACAAAGAAGAAGACTG < 41bp 1 0.0485397489415854 1 0.966986179351807 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 SS18L1 ENSG00000184402 UTR3 Human protein_coding chr20:60757326 chr20:60757341 . . 0 hm6A_associated_SNPs_21345 0 0 1 2 60757328 60757349 mRNA hsa-miR-132 SS18L1 miRanda miRanda
14034 chr20 60963542 60963542 1 + T G rs114402901 60963522 + 60963502 60963542 41 CCTGGTTCTAGGAACTTTTGACTGGAGAGAATCACAGATGT CCTGGTTCTAGGAACTTTTGACTGGAGAGAATCACAGATGG < 41bp 1 0.279697151550737 1 0.293024718761444 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 41 RPS21 ENSG00000171858 UTR3 Human protein_coding chr20:60963522 chr20:60963542 . . 0 hm6A_associated_SNPs_21368 0 0 1 2 60963535 60963557 mRNA hsa-miR-425 RPS21 miRanda miRanda
14034 chr20 60963542 60963542 1 + T G rs114402901 60963522 + 60963502 60963542 41 CCTGGTTCTAGGAACTTTTGACTGGAGAGAATCACAGATGT CCTGGTTCTAGGAACTTTTGACTGGAGAGAATCACAGATGG < 41bp 1 0.279697151550737 1 0.293024718761444 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 41 RPS21 ENSG00000171858 UTR3 Human protein_coding chr20:60963522 chr20:60963542 . . 0 hm6A_associated_SNPs_21368 0 0 1 2 60963536 60963559 mRNA hsa-miR-758 RPS21 miRanda miRanda
14034 chr20 61303346 61303346 1 + C T rs117035894 61303333 + 61303313 61303353 41 GGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC GGTGATGCAATCACACGGGAACTTCTATTTGACTTGCAACC < 41bp 1 0.621612365458998 1 0.972792983055115 experiment 0.756775269082004 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 34 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303333 chr20:61303346 . . 0 hm6A_associated_SNPs_21372 0 0 1 2 61303331 61303356 mRNA hsa-miR-18a SLCO4A1 miRanda miRanda
14034 chr20 61303346 61303346 1 + C T rs117035894 61303333 + 61303313 61303353 41 GGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC GGTGATGCAATCACACGGGAACTTCTATTTGACTTGCAACC < 41bp 1 0.621612365458998 1 0.972792983055115 experiment 0.756775269082004 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 34 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303333 chr20:61303346 . . 0 hm6A_associated_SNPs_21372 0 0 1 2 61303330 61303356 mRNA hsa-miR-18b SLCO4A1 miRanda miRanda
14034 chr20 61303346 61303346 1 + C T rs117035894 61303344 + 61303324 61303364 41 CACACGGGAACTTCTATTTGACCTGCAACCTTCTACTTAAC CACACGGGAACTTCTATTTGACTTGCAACCTTCTACTTAAC < 41bp 1 0.743757415223672 1 0.964852631092072 experiment 0.512485169552656 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303344 chr20:61303346 . . 0 hm6A_associated_SNPs_21373 0 0 1 2 61303331 61303356 mRNA hsa-miR-18a SLCO4A1 miRanda miRanda
14034 chr20 61303346 61303346 1 + C T rs117035894 61303344 + 61303324 61303364 41 CACACGGGAACTTCTATTTGACCTGCAACCTTCTACTTAAC CACACGGGAACTTCTATTTGACTTGCAACCTTCTACTTAAC < 41bp 1 0.743757415223672 1 0.964852631092072 experiment 0.512485169552656 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303344 chr20:61303346 . . 0 hm6A_associated_SNPs_21373 0 0 1 2 61303330 61303356 mRNA hsa-miR-18b SLCO4A1 miRanda miRanda
14034 chr20 61303346 61303346 1 + C T rs117035894 61303363 + 61303343 61303383 41 GACCTGCAACCTTCTACTTAACCTGTGGTTTAAAGTCGGCT GACTTGCAACCTTCTACTTAACCTGTGGTTTAAAGTCGGCT < 41bp 1 0.472555354035603 1 0.855124592781067 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303363 chr20:61303346 . . 0 hm6A_associated_SNPs_21374 0 0 1 2 61303331 61303356 mRNA hsa-miR-18a SLCO4A1 miRanda miRanda
14034 chr20 61303346 61303346 1 + C T rs117035894 61303363 + 61303343 61303383 41 GACCTGCAACCTTCTACTTAACCTGTGGTTTAAAGTCGGCT GACTTGCAACCTTCTACTTAACCTGTGGTTTAAAGTCGGCT < 41bp 1 0.472555354035603 1 0.855124592781067 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303363 chr20:61303346 . . 0 hm6A_associated_SNPs_21374 0 0 1 2 61303330 61303356 mRNA hsa-miR-18b SLCO4A1 miRanda miRanda
14034 chr20 61303351 61303351 1 + A C rs543201833 61303333 + 61303313 61303353 41 GGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC GGTGATGCAATCACACGGGAACTTCTATTTGACCTGCACCC < 41bp 1 0.632158809176245 1 0.968726694583893 experiment 0.73568238164751 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 39 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303333 chr20:61303351 . . 0 hm6A_associated_SNPs_21375 0 0 1 2 61303331 61303356 mRNA hsa-miR-18a SLCO4A1 miRanda miRanda
14034 chr20 61303351 61303351 1 + A C rs543201833 61303333 + 61303313 61303353 41 GGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC GGTGATGCAATCACACGGGAACTTCTATTTGACCTGCACCC < 41bp 1 0.632158809176245 1 0.968726694583893 experiment 0.73568238164751 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 39 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303333 chr20:61303351 . . 0 hm6A_associated_SNPs_21375 0 0 1 2 61303330 61303356 mRNA hsa-miR-18b SLCO4A1 miRanda miRanda
14034 chr20 61303351 61303351 1 + A C rs543201833 61303344 + 61303324 61303364 41 CACACGGGAACTTCTATTTGACCTGCAACCTTCTACTTAAC CACACGGGAACTTCTATTTGACCTGCACCCTTCTACTTAAC < 41bp 1 0.527672614402671 1 0.918178141117096 experiment 0.944654771194659 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303344 chr20:61303351 . . 0 hm6A_associated_SNPs_21376 0 0 1 2 61303331 61303356 mRNA hsa-miR-18a SLCO4A1 miRanda miRanda
14034 chr20 61303351 61303351 1 + A C rs543201833 61303344 + 61303324 61303364 41 CACACGGGAACTTCTATTTGACCTGCAACCTTCTACTTAAC CACACGGGAACTTCTATTTGACCTGCACCCTTCTACTTAAC < 41bp 1 0.527672614402671 1 0.918178141117096 experiment 0.944654771194659 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303344 chr20:61303351 . . 0 hm6A_associated_SNPs_21376 0 0 1 2 61303330 61303356 mRNA hsa-miR-18b SLCO4A1 miRanda miRanda
14034 chr20 61303351 61303351 1 + A C rs543201833 61303363 + 61303343 61303383 41 GACCTGCAACCTTCTACTTAACCTGTGGTTTAAAGTCGGCT GACCTGCACCCTTCTACTTAACCTGTGGTTTAAAGTCGGCT < 41bp 1 0.505524493687665 1 0.846698880195618 experiment 0.98895101262467 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303363 chr20:61303351 . . 0 hm6A_associated_SNPs_21377 0 0 1 2 61303331 61303356 mRNA hsa-miR-18a SLCO4A1 miRanda miRanda
14034 chr20 61303351 61303351 1 + A C rs543201833 61303363 + 61303343 61303383 41 GACCTGCAACCTTCTACTTAACCTGTGGTTTAAAGTCGGCT GACCTGCACCCTTCTACTTAACCTGTGGTTTAAAGTCGGCT < 41bp 1 0.505524493687665 1 0.846698880195618 experiment 0.98895101262467 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303363 chr20:61303351 . . 0 hm6A_associated_SNPs_21377 0 0 1 2 61303330 61303356 mRNA hsa-miR-18b SLCO4A1 miRanda miRanda
14034 chr20 61303620 61303620 1 + G A rs115652099 61303608 + 61303588 61303628 41 CTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATAT CTTGTGTGTCCTCAGTTAAAACTGTGCATATCAAAATATAT < 41bp 1 0.217719214307145 1 0.770663678646088 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303608 chr20:61303620 . . 0 hm6A_associated_SNPs_21382 0 0 1 3 61303601 61303620 mRNA hsa-miR-190 SLCO4A1 miRanda miRanda
14034 chr20 61303620 61303620 1 + G A rs115652099 61303608 + 61303588 61303628 41 CTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATAT CTTGTGTGTCCTCAGTTAAAACTGTGCATATCAAAATATAT < 41bp 1 0.217719214307145 1 0.770663678646088 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303608 chr20:61303620 . . 0 hm6A_associated_SNPs_21382 0 0 1 3 61303614 61303635 mRNA hsa-miR-495 SLCO4A1 miRanda miRanda
14034 chr20 61303620 61303620 1 + G A rs115652099 61303608 + 61303588 61303628 41 CTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATAT CTTGTGTGTCCTCAGTTAAAACTGTGCATATCAAAATATAT < 41bp 1 0.217719214307145 1 0.770663678646088 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 33 SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303608 chr20:61303620 . . 0 hm6A_associated_SNPs_21382 0 0 1 3 61303600 61303620 mRNA hsa-miR-190b SLCO4A1 miRanda miRanda
14034 chr20 61431376 61431376 1 + C T rs561928718 61431372 + 61431352 61431392 41 GGGGCATCGGGCCAGGGAAAACCTCGGATTAGCAAGCAATA GGGGCATCGGGCCAGGGAAAACCTTGGATTAGCAAGCAATA < 41bp 1 0.32995695163231 1 0.961320757865906 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431372 chr20:61431376 . . 0 hm6A_associated_SNPs_21402 0 0 1 1 61431371 61431393 mRNA hsa-miR-137 C20orf20 miRanda miRanda
14034 chr20 61431376 61431376 1 + C T rs561928718 61431396 + 61431376 61431416 41 CGGATTAGCAAGCAATAAAAACATGACCTCACTCTTCCTCA TGGATTAGCAAGCAATAAAAACATGACCTCACTCTTCCTCA < 41bp 1 0.750118614387484 1 0.967862546443939 experiment 0.499762771225033 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431396 chr20:61431376 . . 0 hm6A_associated_SNPs_21403 0 0 1 1 61431371 61431393 mRNA hsa-miR-137 C20orf20 miRanda miRanda
14034 chr20 61431557 61431557 1 + A C rs7397 61431570 + 61431550 61431590 41 CACCCCCACCCACCTGGGAAACTAAGAACTGGATATTTTGC CACCCCCCCCCACCTGGGAAACTAAGAACTGGATATTTTGC < 41bp 1 0.511467341866773 1 0.974649488925934 experiment 0.977065316266454 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431570 chr20:61431557 . . 0 hm6A_associated_SNPs_21406 0 0 1 1 61431555 61431583 mRNA hsa-miR-145 C20orf20 miRanda miRanda
14034 chr20 61431557 61431557 1 + A C rs7397 61431577 + 61431557 61431597 41 ACCCACCTGGGAAACTAAGAACTGGATATTTTGCCTCATTC CCCCACCTGGGAAACTAAGAACTGGATATTTTGCCTCATTC < 41bp 1 0.63894336168081 1 0.990517020225525 experiment 0.72211327663838 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431577 chr20:61431557 . . 0 hm6A_associated_SNPs_21407 0 0 1 1 61431555 61431583 mRNA hsa-miR-145 C20orf20 miRanda miRanda
14034 chr20 61431690 61431690 1 + A C rs149896401 61431683 + 61431663 61431703 41 TTTACTAGTGTTTTATATGAACAAAGTACTGCAGAAGTTAA TTTACTAGTGTTTTATATGAACAAAGTCCTGCAGAAGTTAA < 41bp 1 0.767158234980425 1 0.946596503257751 experiment 0.465683530039149 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431683 chr20:61431690 . . 0 hm6A_associated_SNPs_21408 0 0 1 2 61431675 61431695 mRNA hsa-miR-101 C20orf20 miRanda miRanda
14034 chr20 61431690 61431690 1 + A C rs149896401 61431683 + 61431663 61431703 41 TTTACTAGTGTTTTATATGAACAAAGTACTGCAGAAGTTAA TTTACTAGTGTTTTATATGAACAAAGTCCTGCAGAAGTTAA < 41bp 1 0.767158234980425 1 0.946596503257751 experiment 0.465683530039149 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431683 chr20:61431690 . . 0 hm6A_associated_SNPs_21408 0 0 1 2 61431677 61431699 mRNA hsa-miR-544 C20orf20 miRanda miRanda
14034 chr20 61431690 61431690 1 + A C rs149896401 61431704 + 61431684 61431724 41 CAAAGTACTGCAGAAGTTAAACCTGTGTTGTATTTTTTCTG CAAAGTCCTGCAGAAGTTAAACCTGTGTTGTATTTTTTCTG < 41bp 1 0.150628498168946 1 0.933146357536316 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 7 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431704 chr20:61431690 . . 0 hm6A_associated_SNPs_21409 0 0 1 2 61431675 61431695 mRNA hsa-miR-101 C20orf20 miRanda miRanda
14034 chr20 61431690 61431690 1 + A C rs149896401 61431704 + 61431684 61431724 41 CAAAGTACTGCAGAAGTTAAACCTGTGTTGTATTTTTTCTG CAAAGTCCTGCAGAAGTTAAACCTGTGTTGTATTTTTTCTG < 41bp 1 0.150628498168946 1 0.933146357536316 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 7 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431704 chr20:61431690 . . 0 hm6A_associated_SNPs_21409 0 0 1 2 61431677 61431699 mRNA hsa-miR-544 C20orf20 miRanda miRanda
14034 chr20 61431709 61431709 1 + T A rs41279364 61431704 + 61431684 61431724 41 CAAAGTACTGCAGAAGTTAAACCTGTGTTGTATTTTTTCTG CAAAGTACTGCAGAAGTTAAACCTGAGTTGTATTTTTTCTG < 41bp 1 0.170768182421168 1 0.929427742958069 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 26 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431704 chr20:61431709 . . 0 hm6A_associated_SNPs_21410 0 0 1 3 61431709 61431730 mRNA hsa-miR-216a C20orf20 miRanda miRanda
14034 chr20 61431709 61431709 1 + T A rs41279364 61431704 + 61431684 61431724 41 CAAAGTACTGCAGAAGTTAAACCTGTGTTGTATTTTTTCTG CAAAGTACTGCAGAAGTTAAACCTGAGTTGTATTTTTTCTG < 41bp 1 0.170768182421168 1 0.929427742958069 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 26 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431704 chr20:61431709 . . 0 hm6A_associated_SNPs_21410 0 0 1 3 61431696 61431717 mRNA hsa-miR-381 C20orf20 miRanda miRanda
14034 chr20 61431709 61431709 1 + T A rs41279364 61431704 + 61431684 61431724 41 CAAAGTACTGCAGAAGTTAAACCTGTGTTGTATTTTTTCTG CAAAGTACTGCAGAAGTTAAACCTGAGTTGTATTTTTTCTG < 41bp 1 0.170768182421168 1 0.929427742958069 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 26 MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431704 chr20:61431709 . . 0 hm6A_associated_SNPs_21410 0 0 1 3 61431696 61431717 mRNA hsa-miR-300 C20orf20 miRanda miRanda
14034 chr20 61576647 61576647 1 + T G rs17421774 61576660 + 61576640 61576680 41 CTTTCTGTTAGCTTAGGCAGACATTGGGCCTTCACCTACAA CTTTCTGGTAGCTTAGGCAGACATTGGGCCTTCACCTACAA < 41bp 1 0.666111425243221 1 0.926642656326294 experiment 0.667777149513559 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 GID8 ENSG00000101193 UTR3 Human protein_coding chr20:61576660 chr20:61576647 . . 0 hm6A_associated_SNPs_21430 0 0 1 1 61576640 61576662 mRNA hsa-miR-346 C20orf11 miRanda miRanda
14034 chr20 61919847 61919847 1 + A G rs534655016 61919866 + 61919846 61919886 41 AAGTTCACCAGGTTCACCAGACACGGCCTCCACAATAGCCA AGGTTCACCAGGTTCACCAGACACGGCCTCCACAATAGCCA < 41bp 1 0.779865149762645 1 0.977019667625427 experiment 0.44026970047471 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61919866 chr20:61919847 unknown . 0 hm6A_associated_SNPs_21446 0 0 1 1 61919839 61919860 mRNA hsa-miR-490-3p ARFGAP1 miRanda miRanda
14034 chr20 61919856 61919856 1 + G C rs116908406 61919866 + 61919846 61919886 41 AAGTTCACCAGGTTCACCAGACACGGCCTCCACAATAGCCA AAGTTCACCACGTTCACCAGACACGGCCTCCACAATAGCCA < 41bp 1 0.761180415724029 1 0.983301162719727 experiment 0.477639168551942 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61919866 chr20:61919856 unknown . 0 hm6A_associated_SNPs_21447 0 0 1 1 61919839 61919860 mRNA hsa-miR-490-3p ARFGAP1 miRanda miRanda
14034 chr20 61920409 61920409 1 + C T rs146826668 61920391 + 61920371 61920411 41 GTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAG GTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAATAG < 41bp 1 0.648912698497347 1 0.983081877231598 experiment 0.702174603005306 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 ARFGAP1 ENSG00000101199 UTR3 Human protein_coding chr20:61920391 chr20:61920409 . . 0 hm6A_associated_SNPs_21450 0 0 1 1 61920388 61920409 mRNA hsa-miR-544 ARFGAP1 miRanda miRanda
14034 chr20 61920409 61920409 1 + C T rs146826668 61920408 + 61920388 61920428 41 GGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTC GGGACTCAGCCACTTGCAGAATAGGATGGGACCGAGATTTC Direct Loss 1 0.541260946612121 1 0.951782166957855 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 ARFGAP1 ENSG00000101199 UTR3 Human protein_coding chr20:61920408 chr20:61920409 . . 0 hm6A_associated_SNPs_21451 0 0 1 1 61920388 61920409 mRNA hsa-miR-544 ARFGAP1 miRanda miRanda
14034 chr20 61920409 61920409 1 + C T rs146826668 61920418 + 61920398 61920438 41 CACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCT CACTTGCAGAATAGGATGGGACCGAGATTTCAGCGAGCCCT < 41bp 1 0.37536639574225 1 0.94136905670166 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 ARFGAP1 ENSG00000101199 UTR3 Human protein_coding chr20:61920418 chr20:61920409 . . 0 hm6A_associated_SNPs_21452 0 0 1 1 61920388 61920409 mRNA hsa-miR-544 ARFGAP1 miRanda miRanda
14034 chr20 62367372 62367372 1 + C A rs182765586 62367379 + 62367359 62367399 41 TGCTGGCCTGGGGCGTGCAGACACTGCTGAGTGGAGACAGA TGCTGGCCTGGGGAGTGCAGACACTGCTGAGTGGAGACAGA < 41bp 1 0.432764666307503 1 0.869232058525085 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 14 LIME1;ZGPAT ENSG00000197114;ENSG00000273154 UTR3 Human other chr20:62367379 chr20:62367372 . . 0 hm6A_associated_SNPs_21463 0 0 1 1 62367366 62367389 mRNA hsa-miR-27a ZGPAT miRanda miRanda
14034 chr20 62367377 62367377 1 + A G rs2427535 62367379 + 62367359 62367399 41 TGCTGGCCTGGGGCGTGCAGACACTGCTGAGTGGAGACAGA TGCTGGCCTGGGGCGTGCGGACACTGCTGAGTGGAGACAGA < 41bp 1 0.508790832798696 1 0.918091177940369 experiment 0.982418334402607 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 19 LIME1;ZGPAT ENSG00000197114;ENSG00000273154 UTR3 Human other chr20:62367379 chr20:62367377 . . 0 hm6A_associated_SNPs_21464 0 0 1 1 62367366 62367389 mRNA hsa-miR-27a ZGPAT miRanda miRanda
14034 chr20 62367377 62367377 1 + A G rs2427535 62367395 + 62367375 62367415 41 GCAGACACTGCTGAGTGGAGACAGAGCTGCGGGGTCCCATC GCGGACACTGCTGAGTGGAGACAGAGCTGCGGGGTCCCATC < 41bp 1 0.331843835367181 1 0.829397261142731 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 LIME1;ZGPAT ENSG00000197114;ENSG00000273154 UTR3 Human other chr20:62367395 chr20:62367377 . . 0 hm6A_associated_SNPs_21465 0 0 1 1 62367366 62367389 mRNA hsa-miR-27a ZGPAT miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564846 62564867 mRNA hsa-miR-27a DNAJC5 miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564844 62564864 mRNA hsa-miR-148a DNAJC5 miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564848 62564867 mRNA hsa-miR-27b DNAJC5 miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564848 62564866 mRNA hsa-miR-128 DNAJC5 miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564844 62564864 mRNA hsa-miR-152 DNAJC5 miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564843 62564864 mRNA hsa-miR-148b DNAJC5 miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564840 62564861 mRNA hsa-miR-448 DNAJC5 miRanda miRanda
14034 chr20 62564857 62564857 1 + T C rs574966040 62564842 + 62564822 62564862 41 AATGATCACGAAGACCTTTGACAAGAGGAGAGATATGCACT AATGATCACGAAGACCTTTGACAAGAGGAGAGATACGCACT < 41bp 1 0.525493978577006 1 0.884362578392029 experiment 0.949012042845988 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62564842 chr20:62564857 . . 0 hm6A_associated_SNPs_21487 0 0 1 8 62564840 62564863 mRNA hsa-miR-454 DNAJC5 miRanda miRanda
14034 chr20 62701627 62701627 1 + G A rs6010714 62701634 + 62701614 62701654 41 CATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA CATCTTCCGGGACATTGGAAACACAGACATGAAGTATAAGA < 41bp 1 0.450042754471456 1 0.976916313171387 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 TCEA2 ENSG00000171703 CDS Human protein_coding chr20:62701634 chr20:62701627 nonsynonymous SNV 0.970 0 hm6A_associated_SNPs_21495 0 0 0 1 62701627 62701649 mRNA hsa-miR-205 TCEA2 miRanda miRanda
14034 chr21 17250882 17250882 1 + A G rs77613170 17250892 + 17250872 17250912 41 TGTTGCTGCTATAGTTTTTAACTTTTTTTTATTTTAATAAC TGTTGCTGCTGTAGTTTTTAACTTTTTTTTATTTTAATAAC < 41bp 1 0.701262030660291 1 0.958840072154999 experiment 0.597475938679418 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 USP25 ENSG00000155313 UTR3 Human protein_coding chr21:17250892 chr21:17250882 . . 0 hm6A_associated_SNPs_21504 0 0 1 7 17250862 17250882 mRNA hsa-miR-15a USP25 miRanda miRanda
14034 chr21 17250882 17250882 1 + A G rs77613170 17250892 + 17250872 17250912 41 TGTTGCTGCTATAGTTTTTAACTTTTTTTTATTTTAATAAC TGTTGCTGCTGTAGTTTTTAACTTTTTTTTATTTTAATAAC < 41bp 1 0.701262030660291 1 0.958840072154999 experiment 0.597475938679418 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 USP25 ENSG00000155313 UTR3 Human protein_coding chr21:17250892 chr21:17250882 . . 0 hm6A_associated_SNPs_21504 0 0 1 7 17250858 17250882 mRNA hsa-miR-16 USP25 miRanda miRanda
14034 chr21 17250882 17250882 1 + A G rs77613170 17250892 + 17250872 17250912 41 TGTTGCTGCTATAGTTTTTAACTTTTTTTTATTTTAATAAC TGTTGCTGCTGTAGTTTTTAACTTTTTTTTATTTTAATAAC < 41bp 1 0.701262030660291 1 0.958840072154999 experiment 0.597475938679418 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 USP25 ENSG00000155313 UTR3 Human protein_coding chr21:17250892 chr21:17250882 . . 0 hm6A_associated_SNPs_21504 0 0 1 7 17250860 17250882 mRNA hsa-miR-15b USP25 miRanda miRanda
14034 chr21 17250882 17250882 1 + A G rs77613170 17250892 + 17250872 17250912 41 TGTTGCTGCTATAGTTTTTAACTTTTTTTTATTTTAATAAC TGTTGCTGCTGTAGTTTTTAACTTTTTTTTATTTTAATAAC < 41bp 1 0.701262030660291 1 0.958840072154999 experiment 0.597475938679418 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 USP25 ENSG00000155313 UTR3 Human protein_coding chr21:17250892 chr21:17250882 . . 0 hm6A_associated_SNPs_21504 0 0 1 7 17250859 17250882 mRNA hsa-miR-195 USP25 miRanda miRanda
14034 chr21 17250882 17250882 1 + A G rs77613170 17250892 + 17250872 17250912 41 TGTTGCTGCTATAGTTTTTAACTTTTTTTTATTTTAATAAC TGTTGCTGCTGTAGTTTTTAACTTTTTTTTATTTTAATAAC < 41bp 1 0.701262030660291 1 0.958840072154999 experiment 0.597475938679418 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 USP25 ENSG00000155313 UTR3 Human protein_coding chr21:17250892 chr21:17250882 . . 0 hm6A_associated_SNPs_21504 0 0 1 7 17250859 17250882 mRNA hsa-miR-424 USP25 miRanda miRanda
14034 chr21 17250882 17250882 1 + A G rs77613170 17250892 + 17250872 17250912 41 TGTTGCTGCTATAGTTTTTAACTTTTTTTTATTTTAATAAC TGTTGCTGCTGTAGTTTTTAACTTTTTTTTATTTTAATAAC < 41bp 1 0.701262030660291 1 0.958840072154999 experiment 0.597475938679418 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 USP25 ENSG00000155313 UTR3 Human protein_coding chr21:17250892 chr21:17250882 . . 0 hm6A_associated_SNPs_21504 0 0 1 7 17250861 17250882 mRNA hsa-miR-497 USP25 miRanda miRanda
14034 chr21 17250882 17250882 1 + A G rs77613170 17250892 + 17250872 17250912 41 TGTTGCTGCTATAGTTTTTAACTTTTTTTTATTTTAATAAC TGTTGCTGCTGTAGTTTTTAACTTTTTTTTATTTTAATAAC < 41bp 1 0.701262030660291 1 0.958840072154999 experiment 0.597475938679418 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 USP25 ENSG00000155313 UTR3 Human protein_coding chr21:17250892 chr21:17250882 . . 0 hm6A_associated_SNPs_21504 0 0 1 7 17250858 17250882 mRNA hsa-miR-503 USP25 miRanda miRanda
14034 chr21 27143940 27143940 1 + A G rs71651666 27143920 + 27143900 27143940 41 TTTTCTTCTATTAAAATATAACATTGTGAAAGAAAATAAAA TTTTCTTCTATTAAAATATAACATTGTGAAAGAAAATAAAG < 41bp 1 0.0528061118406555 1 0.05484738945961 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 GABPA ENSG00000154727 UTR3 Human protein_coding chr21:27143920 chr21:27143940 . . 0 hm6A_associated_SNPs_21520 0 0 1 2 27143935 27143956 mRNA hsa-miR-186 GABPA miRanda miRanda
14034 chr21 27143940 27143940 1 + A G rs71651666 27143920 + 27143900 27143940 41 TTTTCTTCTATTAAAATATAACATTGTGAAAGAAAATAAAA TTTTCTTCTATTAAAATATAACATTGTGAAAGAAAATAAAG < 41bp 1 0.0528061118406555 1 0.05484738945961 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 GABPA ENSG00000154727 UTR3 Human protein_coding chr21:27143920 chr21:27143940 . . 0 hm6A_associated_SNPs_21520 0 0 1 2 27143923 27143943 mRNA hsa-miR-590-3p GABPA miRanda miRanda
14034 chr21 30716091 30716091 1 + G C rs191170196 30716077 + 30716057 30716097 41 CACCAATGCCAGAAAACCAGACATCACGGGGAAAGAATGTT CACCAATGCCAGAAAACCAGACATCACGGGGAAACAATGTT < 41bp 1 0.44923103190548 1 0.150207042694092 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30716077 chr21:30716091 . . 0 hm6A_associated_SNPs_21530 0 0 1 1 30716077 30716098 mRNA hsa-miR-543 BACH1 miRanda miRanda
14034 chr21 30717737 30717737 1 + T C rs372883 30717752 + 30717732 30717772 41 CATTGTTCACTATTTTATGAACTGGCCTTCTCAATGTTTGA CATTGCTCACTATTTTATGAACTGGCCTTCTCAATGTTTGA < 41bp 1 0.0595768218852805 1 0.932568192481995 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 6 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30717752 chr21:30717737 . . 0 hm6A_associated_SNPs_21531 0 1 1 1 30717719 30717743 mRNA hsa-miR-301b BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718264 30718285 mRNA hsa-miR-25 BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718263 30718285 mRNA hsa-miR-32 BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718263 30718283 mRNA hsa-miR-33a BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718264 30718285 mRNA hsa-miR-92a BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718264 30718286 mRNA hsa-miR-137 BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718264 30718285 mRNA hsa-miR-363 BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718263 30718285 mRNA hsa-miR-367 BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718264 30718285 mRNA hsa-miR-92b BACH1 miRanda miRanda
14034 chr21 30718267 30718267 1 + A C rs79077501 30718275 + 30718255 30718295 41 TTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAA TTTCATAATATACTTTTCTAACAATGCAATAAAACCACTAA < 41bp 1 0.186681874531895 1 0.268456846475601 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30718275 chr21:30718267 . . 0 hm6A_associated_SNPs_21534 0 0 1 9 30718264 30718283 mRNA hsa-miR-33b BACH1 miRanda miRanda
14034 chr21 33765972 33765972 1 + G T rs543968865 33765966 + 33765946 33765986 41 CAGACTGTCCTCCACCCCAGACTTCCGCAAACTGATGGGCT CAGACTGTCCTCCACCCCAGACTTCCTCAAACTGATGGGCT < 41bp 1 0.767944686394378 1 0.995112895965576 experiment 0.464110627211244 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 27 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33765966 chr21:33765972 . . 0 hm6A_associated_SNPs_21540 0 0 1 1 33765972 33765991 lncRNA hsa-miR-1276 URB1-AS1 miRanda starBase2
14034 chr21 33765972 33765972 1 + G T rs543968865 33765976 + 33765956 33765996 41 TCCACCCCAGACTTCCGCAAACTGATGGGCTCTTTGCGCCG TCCACCCCAGACTTCCTCAAACTGATGGGCTCTTTGCGCCG < 41bp 1 0.565588008629561 1 0.996033132076263 experiment 0.868823982740879 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33765976 chr21:33765972 . . 0 hm6A_associated_SNPs_21541 0 0 1 1 33765972 33765991 lncRNA hsa-miR-1276 URB1-AS1 miRanda starBase2
14034 chr21 33765973 33765973 1 + C T rs186349221 33765966 + 33765946 33765986 41 CAGACTGTCCTCCACCCCAGACTTCCGCAAACTGATGGGCT CAGACTGTCCTCCACCCCAGACTTCCGTAAACTGATGGGCT < 41bp 1 0.77192149710685 1 0.99562680721283 experiment 0.456157005786301 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33765966 chr21:33765973 . . 0 hm6A_associated_SNPs_21542 0 0 1 1 33765972 33765991 lncRNA hsa-miR-1276 URB1-AS1 miRanda starBase2
14034 chr21 33765973 33765973 1 + C T rs186349221 33765976 + 33765956 33765996 41 TCCACCCCAGACTTCCGCAAACTGATGGGCTCTTTGCGCCG TCCACCCCAGACTTCCGTAAACTGATGGGCTCTTTGCGCCG < 41bp 1 0.538883131810027 1 0.99576735496521 experiment 0.922233736379946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33765976 chr21:33765973 . . 0 hm6A_associated_SNPs_21543 0 0 1 1 33765972 33765991 lncRNA hsa-miR-1276 URB1-AS1 miRanda starBase2
14034 chr21 33766035 33766035 1 + G A rs9974384 33766052 + 33766032 33766072 41 TCTGTAAAACCCCTTCCTGGACAGCGTAAGGCCTCCACATC TCTATAAAACCCCTTCCTGGACAGCGTAAGGCCTCCACATC < 41bp 1 0.774720480023489 1 0.993810832500458 experiment 0.450559039953022 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33766052 chr21:33766035 . . 0 hm6A_associated_SNPs_21544 0 0 1 1 33766031 33766048 lncRNA hsa-miR-3179 URB1-AS1 miRanda starBase2
14034 chr21 33766147 33766147 1 + G A rs142491602 33766138 + 33766118 33766158 41 AGTCCTTGGGACTGTTATGAACAGAAAATGATGCAATGTAT AGTCCTTGGGACTGTTATGAACAGAAAATAATGCAATGTAT < 41bp 1 0.712863328043366 1 0.995893180370331 experiment 0.574273343913267 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33766138 chr21:33766147 . . 0 hm6A_associated_SNPs_21545 0 0 1 4 33766134 33766155 mRNA hsa-miR-32 C21orf119 miRanda miRanda
14034 chr21 33766147 33766147 1 + G A rs142491602 33766138 + 33766118 33766158 41 AGTCCTTGGGACTGTTATGAACAGAAAATGATGCAATGTAT AGTCCTTGGGACTGTTATGAACAGAAAATAATGCAATGTAT < 41bp 1 0.712863328043366 1 0.995893180370331 experiment 0.574273343913267 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33766138 chr21:33766147 . . 0 hm6A_associated_SNPs_21545 0 0 1 4 33766134 33766157 mRNA hsa-miR-181a C21orf119 miRanda miRanda
14034 chr21 33766147 33766147 1 + G A rs142491602 33766138 + 33766118 33766158 41 AGTCCTTGGGACTGTTATGAACAGAAAATGATGCAATGTAT AGTCCTTGGGACTGTTATGAACAGAAAATAATGCAATGTAT < 41bp 1 0.712863328043366 1 0.995893180370331 experiment 0.574273343913267 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33766138 chr21:33766147 . . 0 hm6A_associated_SNPs_21545 0 0 1 4 33766134 33766157 mRNA hsa-miR-181b C21orf119 miRanda miRanda
14034 chr21 33766147 33766147 1 + G A rs142491602 33766138 + 33766118 33766158 41 AGTCCTTGGGACTGTTATGAACAGAAAATGATGCAATGTAT AGTCCTTGGGACTGTTATGAACAGAAAATAATGCAATGTAT < 41bp 1 0.712863328043366 1 0.995893180370331 experiment 0.574273343913267 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33766138 chr21:33766147 . . 0 hm6A_associated_SNPs_21545 0 0 1 4 33766134 33766157 mRNA hsa-miR-181d C21orf119 miRanda miRanda
14034 chr21 34401245 34401245 1 + C A rs111388617 34401251 + 34401231 34401271 41 GTTTATTTTTGCCACGTTTAACACAAATGGTAAACTCCTCC GTTTATTTTTGCCAAGTTTAACACAAATGGTAAACTCCTCC < 41bp 1 0.0537144135022809 1 0.713693380355835 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 15 OLIG2 ENSG00000227757 ncRNA_intronic Human antisense chr21:34401251 chr21:34401245 . . 0 hm6A_associated_SNPs_21546 0 0 0 1 34401223 34401246 mRNA hsa-miR-19a OLIG2 miRanda miRanda
14034 chr21 34636739 34636739 1 + A T rs564686022 34636730 + 34636710 34636750 41 CCCCAGTTAAAGTGGGGAAGACAGACTTTAGGATCACGTGT CCCCAGTTAAAGTGGGGAAGACAGACTTTTGGATCACGTGT < 41bp 1 0.229496007551112 1 0.559631645679474 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 IFNAR2 ENSG00000223799 ncRNA_exonic Human antisense chr21:34636730 chr21:34636739 . . 0 hm6A_associated_SNPs_21547 0 0 1 2 34636728 34636752 mRNA hsa-miR-128 IFNAR2 miRanda miRanda
14034 chr21 34636739 34636739 1 + A T rs564686022 34636730 + 34636710 34636750 41 CCCCAGTTAAAGTGGGGAAGACAGACTTTAGGATCACGTGT CCCCAGTTAAAGTGGGGAAGACAGACTTTTGGATCACGTGT < 41bp 1 0.229496007551112 1 0.559631645679474 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 30 IFNAR2 ENSG00000223799 ncRNA_exonic Human antisense chr21:34636730 chr21:34636739 . . 0 hm6A_associated_SNPs_21547 0 0 1 2 34636734 34636755 mRNA hsa-miR-377 IFNAR2 miRanda miRanda
14034 chr21 34636739 34636739 1 + A T rs564686022 34636734 + 34636714 34636754 41 AGTTAAAGTGGGGAAGACAGACTTTAGGATCACGTGTGTGA AGTTAAAGTGGGGAAGACAGACTTTTGGATCACGTGTGTGA < 41bp 1 0.279163983649626 1 0.781839430332184 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 IFNAR2 ENSG00000223799 ncRNA_exonic Human antisense chr21:34636734 chr21:34636739 . . 0 hm6A_associated_SNPs_21548 0 0 1 2 34636728 34636752 mRNA hsa-miR-128 IFNAR2 miRanda miRanda
14034 chr21 34636739 34636739 1 + A T rs564686022 34636734 + 34636714 34636754 41 AGTTAAAGTGGGGAAGACAGACTTTAGGATCACGTGTGTGA AGTTAAAGTGGGGAAGACAGACTTTTGGATCACGTGTGTGA < 41bp 1 0.279163983649626 1 0.781839430332184 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 IFNAR2 ENSG00000223799 ncRNA_exonic Human antisense chr21:34636734 chr21:34636739 . . 0 hm6A_associated_SNPs_21548 0 0 1 2 34636734 34636755 mRNA hsa-miR-377 IFNAR2 miRanda miRanda
14034 chr21 34668747 34668747 1 + A G rs3171425 34668745 + 34668725 34668765 41 GTGAGGGATCAGGGCAGCAAACAAGGGCCAAGACCATCTGA GTGAGGGATCAGGGCAGCAAACGAGGGCCAAGACCATCTGA Direct Loss 1 0.415244856881424 1 0.682165324687958 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 IL10RB ENSG00000243646 UTR3 Human protein_coding chr21:34668745 chr21:34668747 . . 0 hm6A_associated_SNPs_21549 1 0 1 2 34668747 34668771 mRNA hsa-miR-149 IL10RB miRanda miRanda
14034 chr21 34668747 34668747 1 + A G rs3171425 34668745 + 34668725 34668765 41 GTGAGGGATCAGGGCAGCAAACAAGGGCCAAGACCATCTGA GTGAGGGATCAGGGCAGCAAACGAGGGCCAAGACCATCTGA Direct Loss 1 0.415244856881424 1 0.682165324687958 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 IL10RB ENSG00000243646 UTR3 Human protein_coding chr21:34668745 chr21:34668747 . . 0 hm6A_associated_SNPs_21549 1 0 1 2 34668728 34668755 mRNA hsa-miR-328 IL10RB miRanda miRanda
14034 chr21 34668747 34668747 1 + A G rs3171425 34668757 + 34668737 34668777 41 GGCAGCAAACAAGGGCCAAGACCATCTGAGCCAGCCCCACA GGCAGCAAACGAGGGCCAAGACCATCTGAGCCAGCCCCACA < 41bp 1 0.330232101411711 1 0.697975277900696 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 11 IL10RB ENSG00000243646 UTR3 Human protein_coding chr21:34668757 chr21:34668747 . . 0 hm6A_associated_SNPs_21550 1 0 1 2 34668747 34668771 mRNA hsa-miR-149 IL10RB miRanda miRanda
14034 chr21 34668747 34668747 1 + A G rs3171425 34668757 + 34668737 34668777 41 GGCAGCAAACAAGGGCCAAGACCATCTGAGCCAGCCCCACA GGCAGCAAACGAGGGCCAAGACCATCTGAGCCAGCCCCACA < 41bp 1 0.330232101411711 1 0.697975277900696 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 11 IL10RB ENSG00000243646 UTR3 Human protein_coding chr21:34668757 chr21:34668747 . . 0 hm6A_associated_SNPs_21550 1 0 1 2 34668728 34668755 mRNA hsa-miR-328 IL10RB miRanda miRanda
14034 chr21 34668797 34668797 1 + G A rs8178561 34668784 + 34668764 34668804 41 GAGCCAGCCCCACATCTAGAACTCCCAGACCCTGGACTTAG GAGCCAGCCCCACATCTAGAACTCCCAGACCCTAGACTTAG < 41bp 1 0.58511918624976 1 0.858252823352814 experiment 0.829761627500479 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 IL10RB ENSG00000243646 UTR3 Human protein_coding chr21:34668784 chr21:34668797 . . 0 hm6A_associated_SNPs_21551 1 0 1 1 34668793 34668814 mRNA hsa-miR-330-5p IL10RB miRanda miRanda
14034 chr21 34668797 34668797 1 + G A rs8178561 34668792 + 34668772 34668812 41 CCCACATCTAGAACTCCCAGACCCTGGACTTAGCCACCAGA CCCACATCTAGAACTCCCAGACCCTAGACTTAGCCACCAGA < 41bp 1 0.312840621640409 1 0.630392134189606 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 26 IL10RB ENSG00000243646 UTR3 Human protein_coding chr21:34668792 chr21:34668797 . . 0 hm6A_associated_SNPs_21552 1 0 1 1 34668793 34668814 mRNA hsa-miR-330-5p IL10RB miRanda miRanda
14034 chr21 34729311 34729311 1 + T C rs138687780 34729296 + 34729276 34729316 41 GTTAAAATACAAATCATTGAACTGAGGGGGAAAAATGTAAC GTTAAAATACAAATCATTGAACTGAGGGGGAAAAACGTAAC < 41bp 1 0.517430189191852 1 0.958003520965576 experiment 0.965139621616297 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 IFNAR1 ENSG00000142166 UTR3 Human protein_coding chr21:34729296 chr21:34729311 . . 0 hm6A_associated_SNPs_21560 0 0 1 1 34729302 34729323 mRNA hsa-miR-384 IFNAR1 miRanda miRanda
14034 chr21 34809353 34809353 1 + G A rs148361896 34809354 + 34809334 34809374 41 TCTGTCTGGACTTTCCAGAGACCAGTATTCCCTTTTGCTGC TCTGTCTGGACTTTCCAGAAACCAGTATTCCCTTTTGCTGC < 41bp 1 0.382329136656013 1 0.97560065984726 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 20 IFNGR2 ENSG00000159128 UTR3 Human protein_coding chr21:34809354 chr21:34809353 . . 0 hm6A_associated_SNPs_21565 0 0 1 3 34809339 34809363 mRNA hsa-miR-200b IFNGR2 miRanda miRanda
14034 chr21 34809353 34809353 1 + G A rs148361896 34809354 + 34809334 34809374 41 TCTGTCTGGACTTTCCAGAGACCAGTATTCCCTTTTGCTGC TCTGTCTGGACTTTCCAGAAACCAGTATTCCCTTTTGCTGC < 41bp 1 0.382329136656013 1 0.97560065984726 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 20 IFNGR2 ENSG00000159128 UTR3 Human protein_coding chr21:34809354 chr21:34809353 . . 0 hm6A_associated_SNPs_21565 0 0 1 3 34809338 34809363 mRNA hsa-miR-200c IFNGR2 miRanda miRanda
14034 chr21 34809353 34809353 1 + G A rs148361896 34809354 + 34809334 34809374 41 TCTGTCTGGACTTTCCAGAGACCAGTATTCCCTTTTGCTGC TCTGTCTGGACTTTCCAGAAACCAGTATTCCCTTTTGCTGC < 41bp 1 0.382329136656013 1 0.97560065984726 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 20 IFNGR2 ENSG00000159128 UTR3 Human protein_coding chr21:34809354 chr21:34809353 . . 0 hm6A_associated_SNPs_21565 0 0 1 3 34809339 34809363 mRNA hsa-miR-429 IFNGR2 miRanda miRanda
14034 chr21 35515274 35515274 1 + C A rs371811509 35515293 + 35515273 35515313 41 ACGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAAT AAGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAAT < 41bp 1 0.687030883854005 1 0.969448208808899 experiment 0.62593823229199 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515293 chr21:35515274 . . 0 hm6A_associated_SNPs_21583 0 0 1 2 35515269 35515290 mRNA hsa-miR-374a MRPS6 miRanda miRanda
14034 chr21 35515274 35515274 1 + C A rs371811509 35515293 + 35515273 35515313 41 ACGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAAT AAGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAAT < 41bp 1 0.687030883854005 1 0.969448208808899 experiment 0.62593823229199 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515293 chr21:35515274 . . 0 hm6A_associated_SNPs_21583 0 0 1 2 35515269 35515290 mRNA hsa-miR-374b MRPS6 miRanda miRanda
14034 chr21 35515289 35515289 1 + A G rs184299910 35515293 + 35515273 35515313 41 ACGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAAT ACGACCAATGTATTATGTGGACAACTTTTGCTTTGAGTAAT < 41bp 1 0.629287033544123 1 0.961291134357452 experiment 0.741425932911755 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 17 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515293 chr21:35515289 . . 0 hm6A_associated_SNPs_21584 0 0 1 3 35515269 35515290 mRNA hsa-miR-374a MRPS6 miRanda miRanda
14034 chr21 35515289 35515289 1 + A G rs184299910 35515293 + 35515273 35515313 41 ACGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAAT ACGACCAATGTATTATGTGGACAACTTTTGCTTTGAGTAAT < 41bp 1 0.629287033544123 1 0.961291134357452 experiment 0.741425932911755 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 17 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515293 chr21:35515289 . . 0 hm6A_associated_SNPs_21584 0 0 1 3 35515277 35515300 mRNA hsa-miR-382 MRPS6 miRanda miRanda
14034 chr21 35515289 35515289 1 + A G rs184299910 35515293 + 35515273 35515313 41 ACGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAAT ACGACCAATGTATTATGTGGACAACTTTTGCTTTGAGTAAT < 41bp 1 0.629287033544123 1 0.961291134357452 experiment 0.741425932911755 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 17 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515293 chr21:35515289 . . 0 hm6A_associated_SNPs_21584 0 0 1 3 35515269 35515290 mRNA hsa-miR-374b MRPS6 miRanda miRanda
14034 chr21 35515333 35515333 1 + T C rs3746864 35515316 + 35515296 35515336 41 ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGTGGG ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGCGGG < 41bp 1 0.334960670745616 1 0.720820128917694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515316 chr21:35515333 . . 0 hm6A_associated_SNPs_21585 0 0 1 4 35515312 35515334 mRNA hsa-miR-181a MRPS6 miRanda miRanda
14034 chr21 35515333 35515333 1 + T C rs3746864 35515316 + 35515296 35515336 41 ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGTGGG ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGCGGG < 41bp 1 0.334960670745616 1 0.720820128917694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515316 chr21:35515333 . . 0 hm6A_associated_SNPs_21585 0 0 1 4 35515312 35515334 mRNA hsa-miR-181b MRPS6 miRanda miRanda
14034 chr21 35515333 35515333 1 + T C rs3746864 35515316 + 35515296 35515336 41 ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGTGGG ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGCGGG < 41bp 1 0.334960670745616 1 0.720820128917694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515316 chr21:35515333 . . 0 hm6A_associated_SNPs_21585 0 0 1 4 35515313 35515334 mRNA hsa-miR-181c MRPS6 miRanda miRanda
14034 chr21 35515333 35515333 1 + T C rs3746864 35515316 + 35515296 35515336 41 ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGTGGG ACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAATGCGGG < 41bp 1 0.334960670745616 1 0.720820128917694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515316 chr21:35515333 . . 0 hm6A_associated_SNPs_21585 0 0 1 4 35515312 35515334 mRNA hsa-miR-181d MRPS6 miRanda miRanda
14034 chr21 35555203 35555203 1 + A G rs560477364 35555215 + 35555195 35555235 41 ACACCAACATGAAGACATGAACACAATTGCAAAGGGATTGG ACACCAACGTGAAGACATGAACACAATTGCAAAGGGATTGG < 41bp 1 0.0557358026477691 1 0.950677752494812 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 LINC00310 ENSG00000227456 ncRNA_exonic Human lincRNA chr21:35555215 chr21:35555203 . . 0 hm6A_associated_SNPs_21586 0 0 0 1 35555201 35555221 mRNA hsa-miR-599 C21orf82 miRanda miRanda
14034 chr21 37445088 37445088 1 + G A rs141295222 37445094 + 37445074 37445114 41 GCCCAGAAGAAGGTGCAGAGACCCCTGTGTACTTGGCCCTT GCCCAGAAGAAGGTACAGAGACCCCTGTGTACTTGGCCCTT < 41bp 1 0.728032403894566 1 0.858908176422119 experiment 0.543935192210868 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 CBR1 ENSG00000159228 CDS Human protein_coding chr21:37445094 chr21:37445088 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_21593 0 0 1 1 37445088 37445108 mRNA hsa-miR-224 CBR1 miRanda miRanda
14034 chr21 38574953 38574953 1 + A T rs113342255 38574966 + 38574946 38574986 41 AAATTAGATATTGTTTTGTGACTTTTAGACAGTGGTAAATA AAATTAGTTATTGTTTTGTGACTTTTAGACAGTGGTAAATA < 41bp 1 0.129906262256623 1 0.636442422866821 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 TTC3 ENSG00000182670 UTR3 Human protein_coding chr21:38574966 chr21:38574953 . . 0 hm6A_associated_SNPs_21614 0 0 1 1 38574950 38574970 mRNA hsa-miR-224 TTC3 miRanda miRanda
14034 chr21 40769008 40769008 1 + T A rs189865422 40769006 + 40768986 40769026 41 TTGAATATGTTTGTTCTTGGACTTTATGAGAGAGTCTTATA TTGAATATGTTTGTTCTTGGACATTATGAGAGAGTCTTATA < 41bp 1 0.571176240712489 1 0.924654960632324 experiment 0.857647518575023 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 WRB ENSG00000182093 UTR3 Human protein_coding chr21:40769006 chr21:40769008 . . 0 hm6A_associated_SNPs_21628 0 0 1 1 40769004 40769025 mRNA hsa-miR-499-5p WRB miRanda miRanda
14034 chr21 40769017 40769017 1 + G T rs1060180 40769006 + 40768986 40769026 41 TTGAATATGTTTGTTCTTGGACTTTATGAGAGAGTCTTATA TTGAATATGTTTGTTCTTGGACTTTATGAGATAGTCTTATA < 41bp 1 0.46364547900134 1 0.929064989089966 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 WRB ENSG00000182093 UTR3 Human protein_coding chr21:40769006 chr21:40769017 . . 0 hm6A_associated_SNPs_21629 0 0 1 1 40769004 40769025 mRNA hsa-miR-499-5p WRB miRanda miRanda
14034 chr21 44873096 44873096 1 + C T rs183277729 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGTGTG < 41bp 1 0.271246388220525 1 0.709652543067932 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873096 . . 0 hm6A_associated_SNPs_21653 0 0 0 4 44873085 44873108 lncRNA hsa-miR-520g-3p LINC00319 miRanda starBase2
14034 chr21 44873096 44873096 1 + C T rs183277729 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGTGTG < 41bp 1 0.271246388220525 1 0.709652543067932 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873096 . . 0 hm6A_associated_SNPs_21653 0 0 0 4 44873085 44873108 lncRNA hsa-miR-520g-3p CU639417.4 miRanda starBase2
14034 chr21 44873096 44873096 1 + C T rs183277729 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGTGTG < 41bp 1 0.271246388220525 1 0.709652543067932 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873096 . . 0 hm6A_associated_SNPs_21653 0 0 0 4 44873087 44873108 lncRNA hsa-miR-520h LINC00319 miRanda starBase2
14034 chr21 44873096 44873096 1 + C T rs183277729 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGTGTG < 41bp 1 0.271246388220525 1 0.709652543067932 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873096 . . 0 hm6A_associated_SNPs_21653 0 0 0 4 44873087 44873108 lncRNA hsa-miR-520h CU639417.4 miRanda starBase2
14034 chr21 44873097 44873097 1 + G A rs150499418 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCATG < 41bp 1 0.305021665390842 1 0.764503300189972 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873097 . . 0 hm6A_associated_SNPs_21654 0 0 0 4 44873085 44873108 lncRNA hsa-miR-520g-3p LINC00319 miRanda starBase2
14034 chr21 44873097 44873097 1 + G A rs150499418 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCATG < 41bp 1 0.305021665390842 1 0.764503300189972 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873097 . . 0 hm6A_associated_SNPs_21654 0 0 0 4 44873085 44873108 lncRNA hsa-miR-520g-3p CU639417.4 miRanda starBase2
14034 chr21 44873097 44873097 1 + G A rs150499418 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCATG < 41bp 1 0.305021665390842 1 0.764503300189972 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873097 . . 0 hm6A_associated_SNPs_21654 0 0 0 4 44873087 44873108 lncRNA hsa-miR-520h LINC00319 miRanda starBase2
14034 chr21 44873097 44873097 1 + G A rs150499418 44873079 + 44873059 44873099 41 AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCGTG AGCTTTGCCATGTGCAGTGAACCCCTGGACAGTGTTGCATG < 41bp 1 0.305021665390842 1 0.764503300189972 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44873079 chr21:44873097 . . 0 hm6A_associated_SNPs_21654 0 0 0 4 44873087 44873108 lncRNA hsa-miR-520h CU639417.4 miRanda starBase2
14034 chr21 45115859 45115859 1 + G A rs1056604 45115851 + 45115831 45115871 41 GTTTTATCAGAATTTGCTGGACTATGCTGGCAAGGACTTTG GTTTTATCAGAATTTGCTGGACTATGCTAGCAAGGACTTTG < 41bp 1 0.260025854842269 1 0.992353975772858 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115851 chr21:45115859 . . 0 hm6A_associated_SNPs_21666 0 0 1 5 45115853 45115877 mRNA hsa-miR-30a RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115851 + 45115831 45115871 41 GTTTTATCAGAATTTGCTGGACTATGCTGGCAAGGACTTTG GTTTTATCAGAATTTGCTGGACTATGCTAGCAAGGACTTTG < 41bp 1 0.260025854842269 1 0.992353975772858 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115851 chr21:45115859 . . 0 hm6A_associated_SNPs_21666 0 0 1 5 45115852 45115877 mRNA hsa-miR-30c RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115851 + 45115831 45115871 41 GTTTTATCAGAATTTGCTGGACTATGCTGGCAAGGACTTTG GTTTTATCAGAATTTGCTGGACTATGCTAGCAAGGACTTTG < 41bp 1 0.260025854842269 1 0.992353975772858 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115851 chr21:45115859 . . 0 hm6A_associated_SNPs_21666 0 0 1 5 45115853 45115877 mRNA hsa-miR-30d RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115851 + 45115831 45115871 41 GTTTTATCAGAATTTGCTGGACTATGCTGGCAAGGACTTTG GTTTTATCAGAATTTGCTGGACTATGCTAGCAAGGACTTTG < 41bp 1 0.260025854842269 1 0.992353975772858 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115851 chr21:45115859 . . 0 hm6A_associated_SNPs_21666 0 0 1 5 45115853 45115877 mRNA hsa-miR-30b RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115851 + 45115831 45115871 41 GTTTTATCAGAATTTGCTGGACTATGCTGGCAAGGACTTTG GTTTTATCAGAATTTGCTGGACTATGCTAGCAAGGACTTTG < 41bp 1 0.260025854842269 1 0.992353975772858 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115851 chr21:45115859 . . 0 hm6A_associated_SNPs_21666 0 0 1 5 45115853 45115877 mRNA hsa-miR-30e RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115866 + 45115846 45115886 41 GCTGGACTATGCTGGCAAGGACTTTGTTTACGATCAAATTG GCTGGACTATGCTAGCAAGGACTTTGTTTACGATCAAATTG < 41bp 1 0.362013412619763 1 0.99494880437851 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115866 chr21:45115859 . . 0 hm6A_associated_SNPs_21667 0 0 1 5 45115853 45115877 mRNA hsa-miR-30a RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115866 + 45115846 45115886 41 GCTGGACTATGCTGGCAAGGACTTTGTTTACGATCAAATTG GCTGGACTATGCTAGCAAGGACTTTGTTTACGATCAAATTG < 41bp 1 0.362013412619763 1 0.99494880437851 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115866 chr21:45115859 . . 0 hm6A_associated_SNPs_21667 0 0 1 5 45115852 45115877 mRNA hsa-miR-30c RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115866 + 45115846 45115886 41 GCTGGACTATGCTGGCAAGGACTTTGTTTACGATCAAATTG GCTGGACTATGCTAGCAAGGACTTTGTTTACGATCAAATTG < 41bp 1 0.362013412619763 1 0.99494880437851 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115866 chr21:45115859 . . 0 hm6A_associated_SNPs_21667 0 0 1 5 45115853 45115877 mRNA hsa-miR-30d RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115866 + 45115846 45115886 41 GCTGGACTATGCTGGCAAGGACTTTGTTTACGATCAAATTG GCTGGACTATGCTAGCAAGGACTTTGTTTACGATCAAATTG < 41bp 1 0.362013412619763 1 0.99494880437851 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115866 chr21:45115859 . . 0 hm6A_associated_SNPs_21667 0 0 1 5 45115853 45115877 mRNA hsa-miR-30b RRP1B miRanda miRanda
14034 chr21 45115859 45115859 1 + G A rs1056604 45115866 + 45115846 45115886 41 GCTGGACTATGCTGGCAAGGACTTTGTTTACGATCAAATTG GCTGGACTATGCTAGCAAGGACTTTGTTTACGATCAAATTG < 41bp 1 0.362013412619763 1 0.99494880437851 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 14 RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45115866 chr21:45115859 . . 0 hm6A_associated_SNPs_21667 0 0 1 5 45115853 45115877 mRNA hsa-miR-30e RRP1B miRanda miRanda
14034 chr21 45152248 45152248 1 + C T rs192856632 45152267 + 45152247 45152287 41 ACATGAAGTTGGATGGGTAGACTCTGGAAGCGTCCAGACCA ATATGAAGTTGGATGGGTAGACTCTGGAAGCGTCCAGACCA < 41bp 1 0.185341615100284 1 0.751412749290466 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 PDXK ENSG00000160209 UTR5 Human protein_coding chr21:45152267 chr21:45152248 . . 0 hm6A_associated_SNPs_21668 0 0 1 1 45152233 45152251 mRNA hsa-miR-455-5p PDXK miRanda miRanda
14034 chr21 45158504 45158504 1 + A G rs186542304 45158506 + 45158486 45158526 41 CACCGTGTTCAAGGAGAAAGACATTCCTTCGAAGCACTGGA CACCGTGTTCAAGGAGAAGGACATTCCTTCGAAGCACTGGA < 41bp 1 0.430340289407302 1 0.98595529794693 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45158506 chr21:45158504 . . 0 hm6A_associated_SNPs_21672 0 0 1 3 45158492 45158513 mRNA hsa-miR-1 PDXK miRanda miRanda
14034 chr21 45158504 45158504 1 + A G rs186542304 45158506 + 45158486 45158526 41 CACCGTGTTCAAGGAGAAAGACATTCCTTCGAAGCACTGGA CACCGTGTTCAAGGAGAAGGACATTCCTTCGAAGCACTGGA < 41bp 1 0.430340289407302 1 0.98595529794693 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45158506 chr21:45158504 . . 0 hm6A_associated_SNPs_21672 0 0 1 3 45158492 45158513 mRNA hsa-miR-206 PDXK miRanda miRanda
14034 chr21 45158504 45158504 1 + A G rs186542304 45158506 + 45158486 45158526 41 CACCGTGTTCAAGGAGAAAGACATTCCTTCGAAGCACTGGA CACCGTGTTCAAGGAGAAGGACATTCCTTCGAAGCACTGGA < 41bp 1 0.430340289407302 1 0.98595529794693 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45158506 chr21:45158504 . . 0 hm6A_associated_SNPs_21672 0 0 1 3 45158493 45158513 mRNA hsa-miR-613 PDXK miRanda miRanda
14034 chr21 45550959 45550959 1 + C T rs7067 45550947 + 45550927 45550967 41 TCACATGAACTTTGTATGAGACTTATTTATATCTTTAACAT TCACATGAACTTTGTATGAGACTTATTTATATTTTTAACAT < 41bp 1 0.537771776764345 1 0.925140500068665 experiment 0.924456446471309 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 PWP2 ENSG00000241945 UTR3 Human protein_coding chr21:45550947 chr21:45550959 . . 0 hm6A_associated_SNPs_21704 0 0 1 1 45550939 45550959 mRNA hsa-miR-410 PWP2 miRanda miRanda
14034 chr21 45550959 45550959 1 + C T rs7067 45550964 + 45550944 45550984 41 GAGACTTATTTATATCTTTAACATAAAGGTTTGATAAAGAA GAGACTTATTTATATTTTTAACATAAAGGTTTGATAAAGAA < 41bp 1 0.620374977597104 1 0.877410769462585 experiment 0.759250044805791 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 16 PWP2 ENSG00000241945 UTR3 Human protein_coding chr21:45550964 chr21:45550959 . . 0 hm6A_associated_SNPs_21705 0 0 1 1 45550939 45550959 mRNA hsa-miR-410 PWP2 miRanda miRanda
14034 chr21 45861873 45861873 1 + G C rs45547834 45861866 + 45861846 45861886 41 CCGCAAGTCTGCTGCAGATGACCTCATGAACTGGAAGGGGT CCGCAAGTCTGCTGCAGATGACCTCATCAACTGGAAGGGGT < 41bp 1 0.503953430946084 1 0.837996959686279 experiment 0.992093138107832 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 TRPM2 ENSG00000142185 UTR3 Human protein_coding chr21:45861866 chr21:45861873 . . 0 hm6A_associated_SNPs_21715 0 0 0 1 45861859 45861881 mRNA hsa-miR-145 TRPM2 miRanda miRanda
14034 chr21 45861873 45861873 1 + G C rs45547834 45861875 + 45861855 45861895 41 TGCTGCAGATGACCTCATGAACTGGAAGGGGTCAAGGTGAC TGCTGCAGATGACCTCATCAACTGGAAGGGGTCAAGGTGAC Direct Loss 1 0.739137023898987 1 0.869830250740051 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 19 TRPM2 ENSG00000142185 UTR3 Human protein_coding chr21:45861875 chr21:45861873 . . 0 hm6A_associated_SNPs_21716 0 0 0 1 45861859 45861881 mRNA hsa-miR-145 TRPM2 miRanda miRanda
14034 chr21 45862249 45862249 1 + G A rs78172464 45862229 + 45862209 45862249 41 GGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTG GGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTA < 41bp 1 0.44787354539638 1 0.892469882965088 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 TRPM2 ENSG00000142185 UTR3 Human protein_coding chr21:45862229 chr21:45862249 . . 0 hm6A_associated_SNPs_21719 0 0 0 1 45862243 45862267 mRNA hsa-miR-149 TRPM2 miRanda miRanda
14034 chr21 45862249 45862249 1 + G A rs78172464 45862242 + 45862222 45862262 41 ACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGC ACTCCTGACTGTCAGGATAAACTCCGTAGGGGTACAGGAGC < 41bp 1 0.127796599600435 1 0.826478600502014 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 TRPM2 ENSG00000142185 UTR3 Human protein_coding chr21:45862242 chr21:45862249 . . 0 hm6A_associated_SNPs_21720 0 0 0 1 45862243 45862267 mRNA hsa-miR-149 TRPM2 miRanda miRanda
14034 chr21 45877522 45877522 1 + C G rs74756726 45877511 + 45877491 45877531 41 AAGCTTAGAGGAACGGAATGACTGCCCGTGACGATACCATC AAGCTTAGAGGAACGGAATGACTGCCCGTGAGGATACCATC < 41bp 1 0.23317309773582 1 0.995149910449982 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 LRRC3 ENSG00000160233 UTR3 Human protein_coding chr21:45877511 chr21:45877522 . . 0 hm6A_associated_SNPs_21723 0 0 1 2 45877513 45877532 mRNA hsa-miR-202 LRRC3 miRanda miRanda
14034 chr21 45877522 45877522 1 + C G rs74756726 45877511 + 45877491 45877531 41 AAGCTTAGAGGAACGGAATGACTGCCCGTGACGATACCATC AAGCTTAGAGGAACGGAATGACTGCCCGTGAGGATACCATC < 41bp 1 0.23317309773582 1 0.995149910449982 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 LRRC3 ENSG00000160233 UTR3 Human protein_coding chr21:45877511 chr21:45877522 . . 0 hm6A_associated_SNPs_21723 0 0 1 2 45877502 45877526 mRNA hsa-miR-487b LRRC3 miRanda miRanda
14034 chr21 46596498 46596498 1 + C T rs140656510 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCTGCCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.709732828632283 1 0.977046370506287 experiment 0.580534342735435 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596498 synonymous SNV . 0 hm6A_associated_SNPs_21728 0 0 1 5 46596497 46596518 mRNA hsa-miR-130a ADARB1 miRanda miRanda
14034 chr21 46596498 46596498 1 + C T rs140656510 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCTGCCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.709732828632283 1 0.977046370506287 experiment 0.580534342735435 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596498 synonymous SNV . 0 hm6A_associated_SNPs_21728 0 0 1 5 46596494 46596518 mRNA hsa-miR-301a ADARB1 miRanda miRanda
14034 chr21 46596498 46596498 1 + C T rs140656510 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCTGCCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.709732828632283 1 0.977046370506287 experiment 0.580534342735435 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596498 synonymous SNV . 0 hm6A_associated_SNPs_21728 0 0 1 5 46596497 46596518 mRNA hsa-miR-130b ADARB1 miRanda miRanda
14034 chr21 46596498 46596498 1 + C T rs140656510 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCTGCCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.709732828632283 1 0.977046370506287 experiment 0.580534342735435 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596498 synonymous SNV . 0 hm6A_associated_SNPs_21728 0 0 1 5 46596497 46596518 mRNA hsa-miR-454 ADARB1 miRanda miRanda
14034 chr21 46596498 46596498 1 + C T rs140656510 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCTGCCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.709732828632283 1 0.977046370506287 experiment 0.580534342735435 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596498 synonymous SNV . 0 hm6A_associated_SNPs_21728 0 0 1 5 46596494 46596518 mRNA hsa-miR-301b ADARB1 miRanda miRanda
14034 chr21 46646113 46646113 1 + G A rs370390751 46646095 + 46646075 46646115 41 ACGAGTACCAAGCCACAAGAACACTTCTTTTGGCCACAGCA ACGAGTACCAAGCCACAAGAACACTTCTTTTGGCCACAACA < 41bp 1 0.528043177659405 1 0.903045356273651 experiment 0.943913644681191 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646095 chr21:46646113 . . 0 hm6A_associated_SNPs_21737 0 0 1 1 46646109 46646130 mRNA hsa-miR-875-5p ADARB1 miRanda miRanda
14034 chr21 46646126 46646126 1 + G A rs577307979 46646137 + 46646117 46646157 41 AAGCTGATGGTATGTAAGGAACCGATGGGCCATTAAACATG AAGCTGATGATATGTAAGGAACCGATGGGCCATTAAACATG < 41bp 1 0.434034513266275 1 0.966403603553772 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646137 chr21:46646126 . . 0 hm6A_associated_SNPs_21738 0 0 1 2 46646114 46646136 mRNA hsa-miR-205 ADARB1 miRanda miRanda
14034 chr21 46646126 46646126 1 + G A rs577307979 46646137 + 46646117 46646157 41 AAGCTGATGGTATGTAAGGAACCGATGGGCCATTAAACATG AAGCTGATGATATGTAAGGAACCGATGGGCCATTAAACATG < 41bp 1 0.434034513266275 1 0.966403603553772 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646137 chr21:46646126 . . 0 hm6A_associated_SNPs_21738 0 0 1 2 46646109 46646130 mRNA hsa-miR-875-5p ADARB1 miRanda miRanda
14034 chr21 46646264 46646264 1 + T C rs1051385 46646269 + 46646249 46646289 41 AATTTGATTTTAGAATCTGGACACTTTCTATGAATGTAATT AATTTGATTTTAGAACCTGGACACTTTCTATGAATGTAATT < 41bp 1 0.513221407359323 1 0.951521396636963 experiment 0.973557185281355 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646269 chr21:46646264 . . 0 hm6A_associated_SNPs_21739 0 0 1 5 46646261 46646286 mRNA hsa-miR-181a ADARB1 miRanda miRanda
14034 chr21 46646264 46646264 1 + T C rs1051385 46646269 + 46646249 46646289 41 AATTTGATTTTAGAATCTGGACACTTTCTATGAATGTAATT AATTTGATTTTAGAACCTGGACACTTTCTATGAATGTAATT < 41bp 1 0.513221407359323 1 0.951521396636963 experiment 0.973557185281355 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646269 chr21:46646264 . . 0 hm6A_associated_SNPs_21739 0 0 1 5 46646264 46646286 mRNA hsa-miR-181b ADARB1 miRanda miRanda
14034 chr21 46646264 46646264 1 + T C rs1051385 46646269 + 46646249 46646289 41 AATTTGATTTTAGAATCTGGACACTTTCTATGAATGTAATT AATTTGATTTTAGAACCTGGACACTTTCTATGAATGTAATT < 41bp 1 0.513221407359323 1 0.951521396636963 experiment 0.973557185281355 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646269 chr21:46646264 . . 0 hm6A_associated_SNPs_21739 0 0 1 5 46646263 46646282 mRNA hsa-miR-376a ADARB1 miRanda miRanda
14034 chr21 46646264 46646264 1 + T C rs1051385 46646269 + 46646249 46646289 41 AATTTGATTTTAGAATCTGGACACTTTCTATGAATGTAATT AATTTGATTTTAGAACCTGGACACTTTCTATGAATGTAATT < 41bp 1 0.513221407359323 1 0.951521396636963 experiment 0.973557185281355 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646269 chr21:46646264 . . 0 hm6A_associated_SNPs_21739 0 0 1 5 46646262 46646282 mRNA hsa-miR-376b ADARB1 miRanda miRanda
14034 chr21 46646264 46646264 1 + T C rs1051385 46646269 + 46646249 46646289 41 AATTTGATTTTAGAATCTGGACACTTTCTATGAATGTAATT AATTTGATTTTAGAACCTGGACACTTTCTATGAATGTAATT < 41bp 1 0.513221407359323 1 0.951521396636963 experiment 0.973557185281355 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46646269 chr21:46646264 . . 0 hm6A_associated_SNPs_21739 0 0 1 5 46646264 46646286 mRNA hsa-miR-181d ADARB1 miRanda miRanda
14034 chr21 46932525 46932525 1 + C T rs143852653 46932545 + 46932525 46932565 41 CCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC TCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC < 41bp 1 0.628086454793678 1 0.791169762611389 experiment 0.743827090412644 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 COL18A1 ENSG00000182871 UTR3 Human protein_coding chr21:46932545 chr21:46932525 . . 0 hm6A_associated_SNPs_21766 0 0 1 4 46932508 46932529 mRNA hsa-miR-125a-3p COL18A1 miRanda miRanda
14034 chr21 46932525 46932525 1 + C T rs143852653 46932545 + 46932525 46932565 41 CCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC TCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC < 41bp 1 0.628086454793678 1 0.791169762611389 experiment 0.743827090412644 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 COL18A1 ENSG00000182871 UTR3 Human protein_coding chr21:46932545 chr21:46932525 . . 0 hm6A_associated_SNPs_21766 0 0 1 4 46932507 46932531 mRNA hsa-miR-34c-5p COL18A1 miRanda miRanda
14034 chr21 46932525 46932525 1 + C T rs143852653 46932545 + 46932525 46932565 41 CCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC TCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC < 41bp 1 0.628086454793678 1 0.791169762611389 experiment 0.743827090412644 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 COL18A1 ENSG00000182871 UTR3 Human protein_coding chr21:46932545 chr21:46932525 . . 0 hm6A_associated_SNPs_21766 0 0 1 4 46932510 46932531 mRNA hsa-miR-449a COL18A1 miRanda miRanda
14034 chr21 46932525 46932525 1 + C T rs143852653 46932545 + 46932525 46932565 41 CCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC TCTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTC < 41bp 1 0.628086454793678 1 0.791169762611389 experiment 0.743827090412644 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 COL18A1 ENSG00000182871 UTR3 Human protein_coding chr21:46932545 chr21:46932525 . . 0 hm6A_associated_SNPs_21766 0 0 1 4 46932510 46932531 mRNA hsa-miR-449b COL18A1 miRanda miRanda
14034 chr21 47865341 47865341 1 + T C rs138450666 47865323 + 47865303 47865343 41 TTCCCAAGGAAGCTCGTGGGACAGCATGGGCACTACTCTTC TTCCCAAGGAAGCTCGTGGGACAGCATGGGCACTACTCCTC < 41bp 1 0.657668412107929 1 0.872742176055908 experiment 0.684663175784142 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 PCNT ENSG00000160299 UTR3 Human protein_coding chr21:47865323 chr21:47865341 . . 0 hm6A_associated_SNPs_21817 0 0 1 1 47865337 47865362 mRNA hsa-miR-138 PCNT miRanda miRanda
14034 chr21 47988420 47988420 1 + G A rs115448966 47988439 + 47988419 47988459 41 CGAGATGCCGTCTTAAAAAAACAAAAAAGAGGTGTGCTGCT CAAGATGCCGTCTTAAAAAAACAAAAAAGAGGTGTGCTGCT < 41bp 1 0.696016265674232 1 0.397145807743073 experiment 0.607967468651535 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 DIP2A ENSG00000160305 UTR3 Human protein_coding chr21:47988439 chr21:47988420 . . 0 hm6A_associated_SNPs_21826 0 0 0 2 47988414 47988434 mRNA hsa-miR-208a DIP2A miRanda miRanda
14034 chr21 47988420 47988420 1 + G A rs115448966 47988439 + 47988419 47988459 41 CGAGATGCCGTCTTAAAAAAACAAAAAAGAGGTGTGCTGCT CAAGATGCCGTCTTAAAAAAACAAAAAAGAGGTGTGCTGCT < 41bp 1 0.696016265674232 1 0.397145807743073 experiment 0.607967468651535 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 DIP2A ENSG00000160305 UTR3 Human protein_coding chr21:47988439 chr21:47988420 . . 0 hm6A_associated_SNPs_21826 0 0 0 2 47988413 47988434 mRNA hsa-miR-208b DIP2A miRanda miRanda
14034 chr21 48078966 48078966 1 + A G rs139327782 48078963 + 48078943 48078983 41 TACCTGTGCACCCAGATAGGACAATCTGTTGTAGCATTGGA TACCTGTGCACCCAGATAGGACAGTCTGTTGTAGCATTGGA < 41bp 1 0.240705391847015 1 0.804038226604462 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 PRMT2 ENSG00000160310 intronic Human protein_coding chr21:48078963 chr21:48078966 . . 0 hm6A_associated_SNPs_21833 0 0 1 1 48078949 48078969 mRNA hsa-miR-219-5p PRMT2 miRanda miRanda
14034 chr21 48084747 48084747 1 + T C rs15047 48084763 + 48084743 48084783 41 GTGGTGATGTATGCGATGGGACTCTGCATGGGATAGTACAG GTGGCGATGTATGCGATGGGACTCTGCATGGGATAGTACAG < 41bp 1 0.07544981262136 1 0.215181857347488 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 PRMT2 ENSG00000160310 UTR3 Human protein_coding chr21:48084763 chr21:48084747 . . 0 hm6A_associated_SNPs_21835 0 0 1 2 48084726 48084750 mRNA hsa-miR-197 PRMT2 miRanda miRanda
14034 chr21 48084747 48084747 1 + T C rs15047 48084763 + 48084743 48084783 41 GTGGTGATGTATGCGATGGGACTCTGCATGGGATAGTACAG GTGGCGATGTATGCGATGGGACTCTGCATGGGATAGTACAG < 41bp 1 0.07544981262136 1 0.215181857347488 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 PRMT2 ENSG00000160310 UTR3 Human protein_coding chr21:48084763 chr21:48084747 . . 0 hm6A_associated_SNPs_21835 0 0 1 2 48084734 48084757 mRNA hsa-miR-221 PRMT2 miRanda miRanda
14034 chr22 18032694 18032694 1 + G A rs17808690 18032707 + 18032687 18032727 41 CAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTGACA CAGTCACAGGCCCTAAAAGGACACTCCTTAGATGACTGACA < 41bp 1 0.6351901376193 1 0.986207842826843 experiment 0.7296197247614 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 CECR2 ENSG00000099954 UTR3 Human protein_coding chr22:18032707 chr22:18032694 . . 0 hm6A_associated_SNPs_21857 0 0 0 1 18032693 18032714 mRNA hsa-miR-122 CECR2 miRanda miRanda
14034 chr22 18210554 18210554 1 + C T rs28583299 18210552 + 18210532 18210572 41 GGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGC GGTAAAGCACCCCCTCCAGGACTGGGTTTCTCAGCCTTGGC < 41bp 1 0.738603154782296 1 0.758354723453522 experiment 0.522793690435408 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 BCL2L13 ENSG00000099968 UTR3 Human protein_coding chr22:18210552 chr22:18210554 . . 0 hm6A_associated_SNPs_21863 0 0 1 2 18210554 18210576 mRNA hsa-miR-130a BCL2L13 miRanda miRanda
14034 chr22 18210554 18210554 1 + C T rs28583299 18210552 + 18210532 18210572 41 GGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGC GGTAAAGCACCCCCTCCAGGACTGGGTTTCTCAGCCTTGGC < 41bp 1 0.738603154782296 1 0.758354723453522 experiment 0.522793690435408 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 23 BCL2L13 ENSG00000099968 UTR3 Human protein_coding chr22:18210552 chr22:18210554 . . 0 hm6A_associated_SNPs_21863 0 0 1 2 18210554 18210576 mRNA hsa-miR-130b BCL2L13 miRanda miRanda
14034 chr22 18210560 18210560 1 + T G rs725769 18210552 + 18210532 18210572 41 GGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGC GGTAAAGCACCCCCTCCAGGACCGGGTTGCTCAGCCTTGGC < 41bp 1 0.487448452370582 1 0.288446485996246 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 BCL2L13 ENSG00000099968 UTR3 Human protein_coding chr22:18210552 chr22:18210560 . . 0 hm6A_associated_SNPs_21864 0 0 1 2 18210554 18210576 mRNA hsa-miR-130a BCL2L13 miRanda miRanda
14034 chr22 18210560 18210560 1 + T G rs725769 18210552 + 18210532 18210572 41 GGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGC GGTAAAGCACCCCCTCCAGGACCGGGTTGCTCAGCCTTGGC < 41bp 1 0.487448452370582 1 0.288446485996246 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 BCL2L13 ENSG00000099968 UTR3 Human protein_coding chr22:18210552 chr22:18210560 . . 0 hm6A_associated_SNPs_21864 0 0 1 2 18210554 18210576 mRNA hsa-miR-130b BCL2L13 miRanda miRanda
14034 chr22 18571240 18571240 1 + A C rs555963898 18571252 + 18571232 18571272 41 GGCCTTTCACTTCTTGAGAAACATACTTCTTTGCTGGGCAT GGCCTTTCCCTTCTTGAGAAACATACTTCTTTGCTGGGCAT < 41bp 1 0.612799325345673 1 0.794136822223663 experiment 0.774401349308653 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18571252 chr22:18571240 . . 0 hm6A_associated_SNPs_21872 0 0 1 1 18571221 18571241 mRNA hsa-miR-488 PEX26 miRanda miRanda
14034 chr22 18571241 18571241 1 + C T rs74988725 18571252 + 18571232 18571272 41 GGCCTTTCACTTCTTGAGAAACATACTTCTTTGCTGGGCAT GGCCTTTCATTTCTTGAGAAACATACTTCTTTGCTGGGCAT < 41bp 1 0.58801423066635 1 0.782549738883972 experiment 0.823971538667301 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18571252 chr22:18571241 . . 0 hm6A_associated_SNPs_21873 1 0 1 1 18571221 18571241 mRNA hsa-miR-488 PEX26 miRanda miRanda
14034 chr22 19956417 19956417 1 + G A rs9332380 19956404 + 19956384 19956424 41 GCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACT GCCTGCGCCCTGACATGCTAACCTCTCTGAACTACAACACT < 41bp 1 0.204241270486152 1 0.955258965492249 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 COMT ENSG00000093010 UTR3 Human protein_coding chr22:19956404 chr22:19956417 . . 0 hm6A_associated_SNPs_21887 0 0 1 2 19956404 19956427 mRNA hsa-miR-199a-5p COMT miRanda miRanda
14034 chr22 19956417 19956417 1 + G A rs9332380 19956404 + 19956384 19956424 41 GCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACT GCCTGCGCCCTGACATGCTAACCTCTCTGAACTACAACACT < 41bp 1 0.204241270486152 1 0.955258965492249 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 COMT ENSG00000093010 UTR3 Human protein_coding chr22:19956404 chr22:19956417 . . 0 hm6A_associated_SNPs_21887 0 0 1 2 19956404 19956427 mRNA hsa-miR-199b-5p COMT miRanda miRanda
14034 chr22 19956417 19956417 1 + G A rs9332380 19956414 + 19956394 19956434 41 TGACATGCTAACCTCTCTGAACTGCAACACTGGATTGTTCT TGACATGCTAACCTCTCTGAACTACAACACTGGATTGTTCT < 41bp 1 0.541930188177241 1 0.95831310749054 experiment 0.916139623645517 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 24 COMT ENSG00000093010 UTR3 Human protein_coding chr22:19956414 chr22:19956417 . . 0 hm6A_associated_SNPs_21888 0 0 1 2 19956404 19956427 mRNA hsa-miR-199a-5p COMT miRanda miRanda
14034 chr22 19956417 19956417 1 + G A rs9332380 19956414 + 19956394 19956434 41 TGACATGCTAACCTCTCTGAACTGCAACACTGGATTGTTCT TGACATGCTAACCTCTCTGAACTACAACACTGGATTGTTCT < 41bp 1 0.541930188177241 1 0.95831310749054 experiment 0.916139623645517 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 24 COMT ENSG00000093010 UTR3 Human protein_coding chr22:19956414 chr22:19956417 . . 0 hm6A_associated_SNPs_21888 0 0 1 2 19956404 19956427 mRNA hsa-miR-199b-5p COMT miRanda miRanda
14034 chr22 20098544 20098544 1 + G A rs417309 20098560 + 20098540 20098580 41 TCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAA TCATACATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAA < 41bp 1 0.703160239324611 1 0.987947583198547 experiment 0.593679521350777 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 5 DGCR8 ENSG00000243762 ncRNA_exonic Human antisense chr22:20098560 chr22:20098544 . . 0 hm6A_associated_SNPs_21892 0 0 1 1 20098525 20098547 mRNA hsa-miR-448 DGCR8 miRanda miRanda
14034 chr22 20941139 20941139 1 + A C rs544150823 20941159 + 20941139 20941179 41 AAATCCCACACCTGTACAGAACTGGGATAGGCGCAGTGGAG CAATCCCACACCTGTACAGAACTGGGATAGGCGCAGTGGAG < 41bp 1 0.580460462108591 1 0.900332689285278 experiment 0.839079075782818 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 MED15 ENSG00000099917 UTR3 Human protein_coding chr22:20941159 chr22:20941139 . . 0 hm6A_associated_SNPs_21899 0 0 1 1 20941123 20941145 mRNA hsa-miR-876-5p MED15 miRanda miRanda
14034 chr22 21242262 21242262 1 + C T rs375995790 21242261 + 21242241 21242281 41 ATAATAGAGTAGGTCTTAAGACATTTTTGCTGTTATAAGGA ATAATAGAGTAGGTCTTAAGATATTTTTGCTGTTATAAGGA Direct Loss 1 0.569428066530385 1 0.00807270407676697 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 SNAP29 ENSG00000099940 UTR3 Human protein_coding chr22:21242261 chr22:21242262 . . 0 hm6A_associated_SNPs_21912 1 0 1 1 21242255 21242278 mRNA hsa-miR-340 SNAP29 miRanda miRanda
14034 chr22 21306743 21306743 1 + A G rs1043242 21306753 + 21306733 21306773 41 CACTCCAGATATGTGCCAAAACTAGTAAAACTTAACGGACT CACTCCAGATGTGTGCCAAAACTAGTAAAACTTAACGGACT < 41bp 1 0.413119140805141 1 0.9049072265625 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21306753 chr22:21306743 . . 0 hm6A_associated_SNPs_21930 0 0 1 2 21306729 21306752 mRNA hsa-miR-96 CRKL miRanda miRanda
14034 chr22 21306743 21306743 1 + A G rs1043242 21306753 + 21306733 21306773 41 CACTCCAGATATGTGCCAAAACTAGTAAAACTTAACGGACT CACTCCAGATGTGTGCCAAAACTAGTAAAACTTAACGGACT < 41bp 1 0.413119140805141 1 0.9049072265625 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21306753 chr22:21306743 . . 0 hm6A_associated_SNPs_21930 0 0 1 2 21306731 21306752 mRNA hsa-miR-1271 CRKL miRanda miRanda
14034 chr22 21307037 21307037 1 + T C rs142185959 21307032 + 21307012 21307052 41 GTTTTTCACCTGGGAAGGAAACAAATTACGTACTAGAGGGC GTTTTTCACCTGGGAAGGAAACAAACTACGTACTAGAGGGC < 41bp 1 0.548618339543891 1 0.881009221076965 experiment 0.902763320912219 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21307032 chr22:21307037 . . 0 hm6A_associated_SNPs_21934 0 0 1 1 21307034 21307056 mRNA hsa-miR-365 CRKL miRanda miRanda
14034 chr22 21307037 21307037 1 + T C rs142185959 21307057 + 21307037 21307077 41 TTACGTACTAGAGGGCATTGACTGGTTAAAAACTTGTGTAT CTACGTACTAGAGGGCATTGACTGGTTAAAAACTTGTGTAT < 41bp 1 0.546028919246605 1 0.953905582427979 experiment 0.90794216150679 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21307057 chr22:21307037 . . 0 hm6A_associated_SNPs_21935 0 0 1 1 21307034 21307056 mRNA hsa-miR-365 CRKL miRanda miRanda
14034 chr22 21307388 21307388 1 + T C rs115497413 21307376 + 21307356 21307396 41 GTTTGCTCAGAGGAATATGAACATTTTATTTTTGAAAAGGG GTTTGCTCAGAGGAATATGAACATTTTATTTTCGAAAAGGG < 41bp 1 0.782890587363856 1 0.978461265563965 experiment 0.434218825272289 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21307376 chr22:21307388 . . 0 hm6A_associated_SNPs_21939 0 0 1 2 21307378 21307398 mRNA hsa-miR-204 CRKL miRanda miRanda
14034 chr22 21307388 21307388 1 + T C rs115497413 21307376 + 21307356 21307396 41 GTTTGCTCAGAGGAATATGAACATTTTATTTTTGAAAAGGG GTTTGCTCAGAGGAATATGAACATTTTATTTTCGAAAAGGG < 41bp 1 0.782890587363856 1 0.978461265563965 experiment 0.434218825272289 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 33 CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21307376 chr22:21307388 . . 0 hm6A_associated_SNPs_21939 0 0 1 2 21307378 21307398 mRNA hsa-miR-211 CRKL miRanda miRanda
14034 chr22 21804556 21804556 1 + A G rs571617004 21804571 + 21804551 21804591 41 AGCAAATAAGAATCTCAGAGACTCGCAGCATAGCCATACAC AGCAAGTAAGAATCTCAGAGACTCGCAGCATAGCCATACAC < 41bp 1 0.682306311337993 1 0.978537917137146 experiment 0.635387377324014 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21804571 chr22:21804556 . . 0 hm6A_associated_SNPs_21954 0 0 1 1 21804536 21804559 mRNA hsa-miR-137 HIC2 miRanda miRanda
14034 chr22 21977184 21977184 1 + G C rs150998267 21977181 + 21977161 21977201 41 ATGTGTTTTATATTGTTTTGACTGCCTTTTTTTGTAGAAAT ATGTGTTTTATATTGTTTTGACTCCCTTTTTTTGTAGAAAT < 41bp 1 0.365466278554886 1 0.984896659851074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 UBE2L3 ENSG00000185651 UTR3 Human protein_coding chr22:21977181 chr22:21977184 . . 0 hm6A_associated_SNPs_21958 0 0 1 4 21977166 21977187 mRNA hsa-miR-34a UBE2L3 miRanda miRanda
14034 chr22 21977184 21977184 1 + G C rs150998267 21977181 + 21977161 21977201 41 ATGTGTTTTATATTGTTTTGACTGCCTTTTTTTGTAGAAAT ATGTGTTTTATATTGTTTTGACTCCCTTTTTTTGTAGAAAT < 41bp 1 0.365466278554886 1 0.984896659851074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 UBE2L3 ENSG00000185651 UTR3 Human protein_coding chr22:21977181 chr22:21977184 . . 0 hm6A_associated_SNPs_21958 0 0 1 4 21977165 21977187 mRNA hsa-miR-34c-5p UBE2L3 miRanda miRanda
14034 chr22 21977184 21977184 1 + G C rs150998267 21977181 + 21977161 21977201 41 ATGTGTTTTATATTGTTTTGACTGCCTTTTTTTGTAGAAAT ATGTGTTTTATATTGTTTTGACTCCCTTTTTTTGTAGAAAT < 41bp 1 0.365466278554886 1 0.984896659851074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 UBE2L3 ENSG00000185651 UTR3 Human protein_coding chr22:21977181 chr22:21977184 . . 0 hm6A_associated_SNPs_21958 0 0 1 4 21977166 21977187 mRNA hsa-miR-449a UBE2L3 miRanda miRanda
14034 chr22 21977184 21977184 1 + G C rs150998267 21977181 + 21977161 21977201 41 ATGTGTTTTATATTGTTTTGACTGCCTTTTTTTGTAGAAAT ATGTGTTTTATATTGTTTTGACTCCCTTTTTTTGTAGAAAT < 41bp 1 0.365466278554886 1 0.984896659851074 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 UBE2L3 ENSG00000185651 UTR3 Human protein_coding chr22:21977181 chr22:21977184 . . 0 hm6A_associated_SNPs_21958 0 0 1 4 21977166 21977187 mRNA hsa-miR-449b UBE2L3 miRanda miRanda
14034 chr22 22050304 22050304 1 + T A rs190466719 22050322 + 22050302 22050342 41 CTTCTGTCATCTTCTCAGGGACAGCCTATTTATACAACCAG CTACTGTCATCTTCTCAGGGACAGCCTATTTATACAACCAG < 41bp 1 0.781686512628174 1 0.623972952365875 experiment 0.436626974743653 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 PPIL2 ENSG00000100023 UTR3 Human protein_coding chr22:22050322 chr22:22050304 . . 0 hm6A_associated_SNPs_21961 0 0 1 2 22050301 22050322 mRNA hsa-miR-125b PPIL2 miRanda miRanda
14034 chr22 22050304 22050304 1 + T A rs190466719 22050322 + 22050302 22050342 41 CTTCTGTCATCTTCTCAGGGACAGCCTATTTATACAACCAG CTACTGTCATCTTCTCAGGGACAGCCTATTTATACAACCAG < 41bp 1 0.781686512628174 1 0.623972952365875 experiment 0.436626974743653 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 PPIL2 ENSG00000100023 UTR3 Human protein_coding chr22:22050322 chr22:22050304 . . 0 hm6A_associated_SNPs_21961 0 0 1 2 22050299 22050322 mRNA hsa-miR-125a-5p PPIL2 miRanda miRanda
14034 chr22 22050727 22050727 1 + T A rs77238932 22050725 + 22050705 22050745 41 CCCGGCCACTGGGCTCCAAGACTCTGCTCCTCCTGTCAGTC CCCGGCCACTGGGCTCCAAGACACTGCTCCTCCTGTCAGTC < 41bp 1 0.63791929111046 1 0.855176866054535 experiment 0.724161417779081 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 23 PPIL2 ENSG00000100023 UTR3 Human protein_coding chr22:22050725 chr22:22050727 . . 0 hm6A_associated_SNPs_21962 0 0 1 1 22050723 22050748 mRNA hsa-miR-134 PPIL2 miRanda miRanda
14034 chr22 22051204 22051204 1 + C T rs116407377 22051185 + 22051165 22051205 41 CTGCCACAGGCTGCCTGATGACCACTAGAGGTATGTCTGCC CTGCCACAGGCTGCCTGATGACCACTAGAGGTATGTCTGTC < 41bp 1 0.441653257850216 1 0.747940719127655 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 PPIL2 ENSG00000100023 UTR3 Human protein_coding chr22:22051185 chr22:22051204 . . 0 hm6A_associated_SNPs_21963 0 0 1 1 22051200 22051222 mRNA hsa-miR-214 PPIL2 miRanda miRanda
14034 chr22 23465867 23465867 1 + G A rs567270582 23465881 + 23465861 23465901 41 AATGTCGAGGTCTCTTGAAGACTTGAGAAGCTGTCACAAGG AATGTCAAGGTCTCTTGAAGACTTGAGAAGCTGTCACAAGG < 41bp 1 0.727009785440716 1 0.953798294067383 experiment 0.545980429118567 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 GNAZ ENSG00000128266 UTR3 Human protein_coding chr22:23465881 chr22:23465867 . . 0 hm6A_associated_SNPs_21972 0 0 0 1 23465848 23465869 mRNA hsa-miR-23a GNAZ miRanda miRanda
14034 chr22 24313718 24313718 1 - C G rs192739691 24313708 - 24313688 24313728 41 GGGATCCAGGGCATCTGTGAACTGGCTGCTTCTTCCAGAGA GGGATCCAGGCCATCTGTGAACTGGCTGCTTCTTCCAGAGA < 41bp 1 0.72066213182469 1 0.0390170216560364 experiment 0.55867573635062 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 DDT;DDTL ENSG00000099974;ENSG00000099977 UTR3 Human other chr22:24313708 chr22:24313718 . . 0 hm6A_associated_SNPs_21994 0 0 1 4 24313708 24313729 mRNA hsa-miR-27a DDT miRanda miRanda
14034 chr22 24313718 24313718 1 - C G rs192739691 24313708 - 24313688 24313728 41 GGGATCCAGGGCATCTGTGAACTGGCTGCTTCTTCCAGAGA GGGATCCAGGCCATCTGTGAACTGGCTGCTTCTTCCAGAGA < 41bp 1 0.72066213182469 1 0.0390170216560364 experiment 0.55867573635062 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 DDT;DDTL ENSG00000099974;ENSG00000099977 UTR3 Human other chr22:24313708 chr22:24313718 . . 0 hm6A_associated_SNPs_21994 0 0 1 4 24313698 24313720 mRNA hsa-miR-15b DDT miRanda miRanda
14034 chr22 24313718 24313718 1 - C G rs192739691 24313708 - 24313688 24313728 41 GGGATCCAGGGCATCTGTGAACTGGCTGCTTCTTCCAGAGA GGGATCCAGGCCATCTGTGAACTGGCTGCTTCTTCCAGAGA < 41bp 1 0.72066213182469 1 0.0390170216560364 experiment 0.55867573635062 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 DDT;DDTL ENSG00000099974;ENSG00000099977 UTR3 Human other chr22:24313708 chr22:24313718 . . 0 hm6A_associated_SNPs_21994 0 0 1 4 24313709 24313731 mRNA hsa-miR-128 DDT miRanda miRanda
14034 chr22 24313718 24313718 1 - C G rs192739691 24313708 - 24313688 24313728 41 GGGATCCAGGGCATCTGTGAACTGGCTGCTTCTTCCAGAGA GGGATCCAGGCCATCTGTGAACTGGCTGCTTCTTCCAGAGA < 41bp 1 0.72066213182469 1 0.0390170216560364 experiment 0.55867573635062 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 DDT;DDTL ENSG00000099974;ENSG00000099977 UTR3 Human other chr22:24313708 chr22:24313718 . . 0 hm6A_associated_SNPs_21994 0 0 1 4 24313715 24313738 mRNA hsa-miR-874 DDT miRanda miRanda
14034 chr22 24811409 24811409 1 + G A rs189500858 24811391 + 24811371 24811411 41 ATAAGGAGTTTTTCTAGTTAACATTTTTGTTTTGTTACGAG ATAAGGAGTTTTTCTAGTTAACATTTTTGTTTTGTTACAAG < 41bp 1 0.531918298571157 1 0.00456240773200989 experiment 0.936163402857686 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 SPECC1L-ADORA2A ENSG00000100014 UTR3 Human protein_coding chr22:24811391 chr22:24811409 . . 0 hm6A_associated_SNPs_22011 0 0 1 1 24811400 24811421 mRNA hsa-miR-338-3p CYTSA miRanda miRanda
14034 chr22 24968166 24968166 1 + A G rs191761698 24968174 + 24968154 24968194 41 TTTGCTTTGGCTAAATTTTGACACCCTGGGGGATGTCCTGG TTTGCTTTGGCTGAATTTTGACACCCTGGGGGATGTCCTGG < 41bp 1 0.385083791756507 1 0.309449434280396 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 SNRPD3 ENSG00000100028 UTR3 Human protein_coding chr22:24968174 chr22:24968166 . . 0 hm6A_associated_SNPs_22018 0 0 1 1 24968154 24968178 mRNA hsa-miR-19a SNRPD3 miRanda miRanda
14034 chr22 25590817 25590817 1 + G C rs557208545 25590837 + 25590817 25590857 41 GTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG CTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG < 41bp 1 0.0644306088255513 1 0.124683678150177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 KIAA1671 ENSG00000197077 UTR3 Human protein_coding chr22:25590837 chr22:25590817 . . 0 hm6A_associated_SNPs_22020 0 0 1 6 25590803 25590824 mRNA hsa-miR-25 KIAA1671 miRanda miRanda
14034 chr22 25590817 25590817 1 + G C rs557208545 25590837 + 25590817 25590857 41 GTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG CTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG < 41bp 1 0.0644306088255513 1 0.124683678150177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 KIAA1671 ENSG00000197077 UTR3 Human protein_coding chr22:25590837 chr22:25590817 . . 0 hm6A_associated_SNPs_22020 0 0 1 6 25590802 25590824 mRNA hsa-miR-32 KIAA1671 miRanda miRanda
14034 chr22 25590817 25590817 1 + G C rs557208545 25590837 + 25590817 25590857 41 GTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG CTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG < 41bp 1 0.0644306088255513 1 0.124683678150177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 KIAA1671 ENSG00000197077 UTR3 Human protein_coding chr22:25590837 chr22:25590817 . . 0 hm6A_associated_SNPs_22020 0 0 1 6 25590803 25590824 mRNA hsa-miR-92a KIAA1671 miRanda miRanda
14034 chr22 25590817 25590817 1 + G C rs557208545 25590837 + 25590817 25590857 41 GTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG CTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG < 41bp 1 0.0644306088255513 1 0.124683678150177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 KIAA1671 ENSG00000197077 UTR3 Human protein_coding chr22:25590837 chr22:25590817 . . 0 hm6A_associated_SNPs_22020 0 0 1 6 25590805 25590824 mRNA hsa-miR-363 KIAA1671 miRanda miRanda
14034 chr22 25590817 25590817 1 + G C rs557208545 25590837 + 25590817 25590857 41 GTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG CTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG < 41bp 1 0.0644306088255513 1 0.124683678150177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 KIAA1671 ENSG00000197077 UTR3 Human protein_coding chr22:25590837 chr22:25590817 . . 0 hm6A_associated_SNPs_22020 0 0 1 6 25590804 25590824 mRNA hsa-miR-367 KIAA1671 miRanda miRanda
14034 chr22 25590817 25590817 1 + G C rs557208545 25590837 + 25590817 25590857 41 GTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG CTGCAATGAAGTTAGAAGTAACTGATGATTGGGAGCCTTTG < 41bp 1 0.0644306088255513 1 0.124683678150177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 1 KIAA1671 ENSG00000197077 UTR3 Human protein_coding chr22:25590837 chr22:25590817 . . 0 hm6A_associated_SNPs_22020 0 0 1 6 25590803 25590824 mRNA hsa-miR-92b KIAA1671 miRanda miRanda
14034 chr22 29183714 29183714 1 + A G rs112000931 29183717 + 29183697 29183737 41 TGATAGGGCAAAATAAAATGACAATTTCTTTATTGCTACAG TGATAGGGCAAAATAAAGTGACAATTTCTTTATTGCTACAG < 41bp 1 0.560609340500186 1 0.0953738689422607 experiment 0.878781318999628 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 CCDC117 ENSG00000159873 UTR3 Human protein_coding chr22:29183717 chr22:29183714 . . 0 hm6A_associated_SNPs_22052 0 0 1 1 29183706 29183728 mRNA hsa-miR-186 CCDC117 miRanda miRanda
14034 chr22 29184245 29184245 1 + T C rs568694373 29184256 + 29184236 29184276 41 TGTAGTCATTGTTTGATGGGACCAACTTGTAAAGTATGAGC TGTAGTCATCGTTTGATGGGACCAACTTGTAAAGTATGAGC < 41bp 1 0.216486101561449 1 0.787007331848145 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 CCDC117 ENSG00000159873 UTR3 Human protein_coding chr22:29184256 chr22:29184245 . . 0 hm6A_associated_SNPs_22053 0 0 1 2 29184240 29184261 mRNA hsa-miR-133a CCDC117 miRanda miRanda
14034 chr22 29184245 29184245 1 + T C rs568694373 29184256 + 29184236 29184276 41 TGTAGTCATTGTTTGATGGGACCAACTTGTAAAGTATGAGC TGTAGTCATCGTTTGATGGGACCAACTTGTAAAGTATGAGC < 41bp 1 0.216486101561449 1 0.787007331848145 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 CCDC117 ENSG00000159873 UTR3 Human protein_coding chr22:29184256 chr22:29184245 . . 0 hm6A_associated_SNPs_22053 0 0 1 2 29184240 29184261 mRNA hsa-miR-133b CCDC117 miRanda miRanda
14034 chr22 29451963 29451963 1 + T C rs115252587 29451983 + 29451963 29452003 41 TGTGTCTAGTTTTCACTTGAACAAGTGATAGCTGCAGATGG CGTGTCTAGTTTTCACTTGAACAAGTGATAGCTGCAGATGG < 41bp 1 0.0770805094322219 1 0.0904380679130554 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 ZNRF3 ENSG00000183579 UTR3 Human protein_coding chr22:29451983 chr22:29451963 . . 0 hm6A_associated_SNPs_22059 0 0 0 2 29451961 29451983 mRNA hsa-miR-26a ZNRF3 miRanda miRanda
14034 chr22 29451963 29451963 1 + T C rs115252587 29451983 + 29451963 29452003 41 TGTGTCTAGTTTTCACTTGAACAAGTGATAGCTGCAGATGG CGTGTCTAGTTTTCACTTGAACAAGTGATAGCTGCAGATGG < 41bp 1 0.0770805094322219 1 0.0904380679130554 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 ZNRF3 ENSG00000183579 UTR3 Human protein_coding chr22:29451983 chr22:29451963 . . 0 hm6A_associated_SNPs_22059 0 0 0 2 29451962 29451983 mRNA hsa-miR-26b ZNRF3 miRanda miRanda
14034 chr22 29452564 29452564 1 + G A rs75967761 29452550 + 29452530 29452570 41 ACAGACACCCTTTTCGGTGGACTCTGAGTGGTGTGTAGTGG ACAGACACCCTTTTCGGTGGACTCTGAGTGGTGTATAGTGG < 41bp 1 0.132469798923997 1 0.768040418624878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 ZNRF3 ENSG00000183579 UTR3 Human protein_coding chr22:29452550 chr22:29452564 . . 0 hm6A_associated_SNPs_22060 0 0 1 2 29452546 29452566 mRNA hsa-miR-362-3p ZNRF3 miRanda miRanda
14034 chr22 29452564 29452564 1 + G A rs75967761 29452550 + 29452530 29452570 41 ACAGACACCCTTTTCGGTGGACTCTGAGTGGTGTGTAGTGG ACAGACACCCTTTTCGGTGGACTCTGAGTGGTGTATAGTGG < 41bp 1 0.132469798923997 1 0.768040418624878 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 ZNRF3 ENSG00000183579 UTR3 Human protein_coding chr22:29452550 chr22:29452564 . . 0 hm6A_associated_SNPs_22060 0 0 1 2 29452546 29452566 mRNA hsa-miR-329 ZNRF3 miRanda miRanda
14034 chr22 29696305 29696305 1 + C G rs557978659 29696304 + 29696284 29696324 41 TTTTCACCATTTGTGAAGAAACATTAAAACAAGTTAAATGG TTTTCACCATTTGTGAAGAAAGATTAAAACAAGTTAAATGG Direct Loss 1 0.613030562764142 1 0.628302991390228 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 EWSR1 ENSG00000182944 UTR3 Human protein_coding chr22:29696304 chr22:29696305 . . 0 hm6A_associated_SNPs_22067 0 0 1 1 29696303 29696328 mRNA hsa-miR-136 EWSR1 miRanda miRanda
14034 chr22 29696305 29696305 1 + C G rs557978659 29696312 + 29696292 29696332 41 ATTTGTGAAGAAACATTAAAACAAGTTAAATGGTAGTGTGC ATTTGTGAAGAAAGATTAAAACAAGTTAAATGGTAGTGTGC < 41bp 1 0.600283564478012 1 0.462960869073868 experiment 0.799432871043976 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 14 EWSR1 ENSG00000182944 UTR3 Human protein_coding chr22:29696312 chr22:29696305 . . 0 hm6A_associated_SNPs_22068 0 0 1 1 29696303 29696328 mRNA hsa-miR-136 EWSR1 miRanda miRanda
14034 chr22 30818518 30818518 1 + G A rs374025159 30818507 + 30818487 30818527 41 CAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCAT CAAAGAAACTGGGCTGGAGGACAGACCTCAGAAGCTTTCAT < 41bp 1 0.117249426951586 1 0.853442311286926 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 32 SEC14L2 ENSG00000100003 UTR3 Human protein_coding chr22:30818507 chr22:30818518 . . 0 hm6A_associated_SNPs_22083 0 0 0 1 30818511 30818532 mRNA hsa-miR-203 SEC14L2 miRanda miRanda
14034 chr22 31602573 31602573 1 + A G rs186826132 31602565 + 31602545 31602585 41 TAGGAAAATGAATCATTTGGACTCTTCAATGAAATGGAGTG TAGGAAAATGAATCATTTGGACTCTTCAGTGAAATGGAGTG < 41bp 1 0.688092330651119 1 0.95267927646637 experiment 0.623815338697762 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 RNF185 ENSG00000138942 UTR3 Human protein_coding chr22:31602565 chr22:31602573 . . 0 hm6A_associated_SNPs_22118 0 0 1 1 31602563 31602584 mRNA hsa-miR-136 RNF185 miRanda miRanda
14034 chr22 32353382 32353382 1 + T C rs115884522 32353390 + 32353370 32353410 41 TGAAAGTTTTGATACTTGTAACTTTTTTTTTTTTTTGGTTG TGAAAGTTTTGACACTTGTAACTTTTTTTTTTTTTTGGTTG < 41bp 1 0.208384943114617 1 0.0252741575241089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 YWHAH ENSG00000128245 UTR3 Human protein_coding chr22:32353390 chr22:32353382 . . 0 hm6A_associated_SNPs_22131 0 0 1 6 32353369 32353389 mRNA hsa-miR-26a YWHAH miRanda miRanda
14034 chr22 32353382 32353382 1 + T C rs115884522 32353390 + 32353370 32353410 41 TGAAAGTTTTGATACTTGTAACTTTTTTTTTTTTTTGGTTG TGAAAGTTTTGACACTTGTAACTTTTTTTTTTTTTTGGTTG < 41bp 1 0.208384943114617 1 0.0252741575241089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 YWHAH ENSG00000128245 UTR3 Human protein_coding chr22:32353390 chr22:32353382 . . 0 hm6A_associated_SNPs_22131 0 0 1 6 32353371 32353389 mRNA hsa-miR-26b YWHAH miRanda miRanda
14034 chr22 32353382 32353382 1 + T C rs115884522 32353390 + 32353370 32353410 41 TGAAAGTTTTGATACTTGTAACTTTTTTTTTTTTTTGGTTG TGAAAGTTTTGACACTTGTAACTTTTTTTTTTTTTTGGTTG < 41bp 1 0.208384943114617 1 0.0252741575241089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 YWHAH ENSG00000128245 UTR3 Human protein_coding chr22:32353390 chr22:32353382 . . 0 hm6A_associated_SNPs_22131 0 0 1 6 32353374 32353394 mRNA hsa-miR-224 YWHAH miRanda miRanda
14034 chr22 32353382 32353382 1 + T C rs115884522 32353390 + 32353370 32353410 41 TGAAAGTTTTGATACTTGTAACTTTTTTTTTTTTTTGGTTG TGAAAGTTTTGACACTTGTAACTTTTTTTTTTTTTTGGTTG < 41bp 1 0.208384943114617 1 0.0252741575241089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 YWHAH ENSG00000128245 UTR3 Human protein_coding chr22:32353390 chr22:32353382 . . 0 hm6A_associated_SNPs_22131 0 0 1 6 32353368 32353391 mRNA hsa-miR-381 YWHAH miRanda miRanda
14034 chr22 32353382 32353382 1 + T C rs115884522 32353390 + 32353370 32353410 41 TGAAAGTTTTGATACTTGTAACTTTTTTTTTTTTTTGGTTG TGAAAGTTTTGACACTTGTAACTTTTTTTTTTTTTTGGTTG < 41bp 1 0.208384943114617 1 0.0252741575241089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 YWHAH ENSG00000128245 UTR3 Human protein_coding chr22:32353390 chr22:32353382 . . 0 hm6A_associated_SNPs_22131 0 0 1 6 32353368 32353391 mRNA hsa-miR-300 YWHAH miRanda miRanda
14034 chr22 32353382 32353382 1 + T C rs115884522 32353390 + 32353370 32353410 41 TGAAAGTTTTGATACTTGTAACTTTTTTTTTTTTTTGGTTG TGAAAGTTTTGACACTTGTAACTTTTTTTTTTTTTTGGTTG < 41bp 1 0.208384943114617 1 0.0252741575241089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 YWHAH ENSG00000128245 UTR3 Human protein_coding chr22:32353390 chr22:32353382 . . 0 hm6A_associated_SNPs_22131 0 0 1 6 32353375 32353389 mRNA hsa-miR-1297 YWHAH miRanda miRanda
14034 chr22 35719604 35719604 1 + C T rs531961266 35719592 + 35719572 35719612 41 GTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACA GTTCCCCATGACTGACCTGGACATGCTGTCACTCATCCACA < 41bp 1 0.582906054334686 1 0.794910907745361 experiment 0.834187891330628 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 33 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719592 chr22:35719604 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_22140 0 0 1 3 35719603 35719623 mRNA hsa-miR-330-5p TOM1 miRanda miRanda
14034 chr22 35719604 35719604 1 + C T rs531961266 35719592 + 35719572 35719612 41 GTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACA GTTCCCCATGACTGACCTGGACATGCTGTCACTCATCCACA < 41bp 1 0.582906054334686 1 0.794910907745361 experiment 0.834187891330628 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 33 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719592 chr22:35719604 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_22140 0 0 1 3 35719604 35719623 mRNA hsa-miR-326 TOM1 miRanda miRanda
14034 chr22 35719604 35719604 1 + C T rs531961266 35719592 + 35719572 35719612 41 GTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACA GTTCCCCATGACTGACCTGGACATGCTGTCACTCATCCACA < 41bp 1 0.582906054334686 1 0.794910907745361 experiment 0.834187891330628 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 33 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719592 chr22:35719604 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_22140 0 0 1 3 35719583 35719604 mRNA hsa-miR-542-3p TOM1 miRanda miRanda
14034 chr22 35806815 35806815 1 + T A rs133417 35806813 + 35806793 35806833 41 CCATCAAGAAGTTTGGCCTGACTACCAGCAGGGGCCGTGAC CCATCAAGAAGTTTGGCCTGACAACCAGCAGGGGCCGTGAC < 41bp 1 0.542067982411706 1 0.133222311735153 experiment 0.915864035176588 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35806813 chr22:35806815 synonymous SNV . 0 hm6A_associated_SNPs_22143 0 0 1 1 35806803 35806825 mRNA hsa-miR-370 MCM5 miRanda miRanda
14034 chr22 35806815 35806815 1 + T A rs133417 35806832 + 35806812 35806852 41 GACTACCAGCAGGGGCCGTGACAGGGTGGGCGTGGGCATCC GACAACCAGCAGGGGCCGTGACAGGGTGGGCGTGGGCATCC < 41bp 1 0.595847172783041 1 0.0403786599636078 experiment 0.808305654433917 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35806832 chr22:35806815 synonymous SNV . 0 hm6A_associated_SNPs_22144 0 0 1 1 35806803 35806825 mRNA hsa-miR-370 MCM5 miRanda miRanda
14034 chr22 36055730 36055730 1 + A G rs147866631 36055728 + 36055708 36055748 41 GATGAGGGTGCCTGTCCTGGACAGACCTCGGCATGCCTTCT GATGAGGGTGCCTGTCCTGGACGGACCTCGGCATGCCTTCT Direct Loss 1 0.504910254225652 1 0.0212112367153168 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 APOL6 ENSG00000221963 UTR3 Human protein_coding chr22:36055728 chr22:36055730 . . 0 hm6A_associated_SNPs_22155 0 0 0 1 36055715 36055737 mRNA hsa-miR-485-5p APOL6 miRanda miRanda
14034 chr22 37425564 37425564 1 + A G rs189755753 37425547 + 37425527 37425567 41 TCTCAGAGGGCCGGGGGAAGACCCACTGAAGCTGGGCAGGA TCTCAGAGGGCCGGGGGAAGACCCACTGAAGCTGGGCGGGA < 41bp 1 0.443165947503541 1 0.8554328083992 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 MPST ENSG00000128309 UTR3 Human protein_coding chr22:37425547 chr22:37425564 . . 0 hm6A_associated_SNPs_22168 0 0 1 1 37425559 37425583 mRNA hsa-miR-149 MPST miRanda miRanda
14034 chr22 37425564 37425564 1 + A G rs189755753 37425567 + 37425547 37425587 41 ACCCACTGAAGCTGGGCAGGACACAGGCGAGCTCAGGTGAT ACCCACTGAAGCTGGGCGGGACACAGGCGAGCTCAGGTGAT < 41bp 1 0.75893547730286 1 0.751922488212585 experiment 0.482129045394279 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 18 MPST ENSG00000128309 UTR3 Human protein_coding chr22:37425567 chr22:37425564 . . 0 hm6A_associated_SNPs_22169 0 0 1 1 37425559 37425583 mRNA hsa-miR-149 MPST miRanda miRanda
14034 chr22 37965099 37965099 1 + C T rs143128226 37965110 + 37965090 37965130 41 CCACCCCCACCAGCTGGAGGACCCAGCCTCACAGTGTGTCC CCACCCCCATCAGCTGGAGGACCCAGCCTCACAGTGTGTCC < 41bp 1 0.325616590992708 1 0.423614978790283 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 10 CDC42EP1 ENSG00000128283 UTR3 Human protein_coding chr22:37965110 chr22:37965099 . . 0 hm6A_associated_SNPs_22188 0 0 1 1 37965099 37965120 mRNA hsa-miR-485-5p CDC42EP1 miRanda miRanda
14034 chr22 37965240 37965240 1 + G A rs201507112 37965258 + 37965238 37965278 41 GCGTCCCTGCTGCAACCCTGACAGCCGTCTCCCAGGCCGCT GCATCCCTGCTGCAACCCTGACAGCCGTCTCCCAGGCCGCT < 41bp 1 0.462626708006192 1 0.174545377492905 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 CDC42EP1 ENSG00000128283 UTR3 Human protein_coding chr22:37965258 chr22:37965240 . . 0 hm6A_associated_SNPs_22189 0 0 1 1 37965233 37965257 mRNA hsa-miR-296-3p CDC42EP1 miRanda miRanda
14034 chr22 38028895 38028895 1 + G A rs191111308 38028911 + 38028891 38028931 41 CCCCGCCCCTGCTGAGCCAAACCCAGTAGGAGGCTGGGCCT CCCCACCCCTGCTGAGCCAAACCCAGTAGGAGGCTGGGCCT < 41bp 1 0.504747227806614 1 0.572387158870697 experiment 0.990505544386772 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 5 GGA1 ENSG00000100083 UTR3 Human protein_coding chr22:38028911 chr22:38028895 . . 0 hm6A_associated_SNPs_22197 0 0 1 1 38028890 38028909 mRNA hsa-miR-24 GGA1 miRanda miRanda
14034 chr22 38028897 38028897 1 + C G rs538690480 38028911 + 38028891 38028931 41 CCCCGCCCCTGCTGAGCCAAACCCAGTAGGAGGCTGGGCCT CCCCGCGCCTGCTGAGCCAAACCCAGTAGGAGGCTGGGCCT < 41bp 1 0.476376754841599 1 0.498422503471375 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 7 GGA1 ENSG00000100083 UTR3 Human protein_coding chr22:38028911 chr22:38028897 . . 0 hm6A_associated_SNPs_22198 0 0 1 1 38028890 38028909 mRNA hsa-miR-24 GGA1 miRanda miRanda
14034 chr22 38062112 38062112 1 + C G rs7291867 38062110 + 38062090 38062130 41 TATGGATTCATCTTGGCCTGACCCAGCCAGGTGGCCTTATT TATGGATTCATCTTGGCCTGACGCAGCCAGGTGGCCTTATT Direct Loss 1 0.644361781247923 1 0.915814518928528 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 23 PDXP ENSG00000100092;ENSG00000241360 UTR3 Human other chr22:38062110 chr22:38062112 . . 0 hm6A_associated_SNPs_22201 0 0 1 1 38062107 38062128 mRNA hsa-miR-506 PDXP miRanda miRanda
14034 chr22 38611298 38611298 1 + A C rs11544353 38611289 + 38611269 38611309 41 GCTAGGTTTGGCTGTCTGTGACTTACGGGACCGTCCTGCTG GCTAGGTTTGGCTGTCTGTGACTTACGGGCCCGTCCTGCTG < 41bp 1 0.305696293758602 1 0.464133024215698 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 30 MAFF ENSG00000185022 UTR3 Human protein_coding chr22:38611289 chr22:38611298 . . 0 hm6A_associated_SNPs_22226 0 0 1 1 38611290 38611310 mRNA hsa-miR-214 MAFF miRanda miRanda
14034 chr22 39079964 39079964 1 + T C rs5750668 39079961 + 39079941 39079981 41 TGGCACATTGATCTATCTAAACCTGGTGGGGAGAATTATCC TGGCACATTGATCTATCTAAACCCGGTGGGGAGAATTATCC < 41bp 1 0.395049173562559 1 0.493278384208679 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39079961 chr22:39079964 . . 0 hm6A_associated_SNPs_22232 0 0 1 1 39079963 39079986 mRNA hsa-miR-491-5p TOMM22 miRanda miRanda
14034 chr22 39079974 39079974 1 + A G rs190872277 39079961 + 39079941 39079981 41 TGGCACATTGATCTATCTAAACCTGGTGGGGAGAATTATCC TGGCACATTGATCTATCTAAACCTGGTGGGGAGGATTATCC < 41bp 1 0.461202722150028 1 0.60113137960434 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 34 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39079961 chr22:39079974 . . 0 hm6A_associated_SNPs_22233 0 0 1 2 39079966 39079988 mRNA hsa-miR-299-3p TOMM22 miRanda miRanda
14034 chr22 39079974 39079974 1 + A G rs190872277 39079961 + 39079941 39079981 41 TGGCACATTGATCTATCTAAACCTGGTGGGGAGAATTATCC TGGCACATTGATCTATCTAAACCTGGTGGGGAGGATTATCC < 41bp 1 0.461202722150028 1 0.60113137960434 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 34 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39079961 chr22:39079974 . . 0 hm6A_associated_SNPs_22233 0 0 1 2 39079963 39079986 mRNA hsa-miR-491-5p TOMM22 miRanda miRanda
14034 chr22 39080128 39080128 1 + C G rs140753812 39080127 + 39080107 39080147 41 CTTTCACCAAATTGCTCCTAACTGGAAGATCTCACTTTCCC CTTTCACCAAATTGCTCCTAAGTGGAAGATCTCACTTTCCC Direct Loss 1 0.357769818856475 1 0.736226677894592 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39080127 chr22:39080128 . . 0 hm6A_associated_SNPs_22234 0 0 1 1 39080111 39080133 mRNA hsa-miR-145 TOMM22 miRanda miRanda
14034 chr22 39080200 39080200 1 + C T rs570344670 39080192 + 39080172 39080212 41 GTGGGAGGGATGTGCCCCTGACCATTAACGACTGTTTTTTT GTGGGAGGGATGTGCCCCTGACCATTAATGACTGTTTTTTT < 41bp 1 0.115472765941417 1 0.471520692110062 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39080192 chr22:39080200 . . 0 hm6A_associated_SNPs_22236 0 0 1 2 39080185 39080208 mRNA hsa-miR-212 TOMM22 miRanda miRanda
14034 chr22 39080200 39080200 1 + C T rs570344670 39080192 + 39080172 39080212 41 GTGGGAGGGATGTGCCCCTGACCATTAACGACTGTTTTTTT GTGGGAGGGATGTGCCCCTGACCATTAATGACTGTTTTTTT < 41bp 1 0.115472765941417 1 0.471520692110062 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39080192 chr22:39080200 . . 0 hm6A_associated_SNPs_22236 0 0 1 2 39080190 39080208 mRNA hsa-miR-132 TOMM22 miRanda miRanda
14034 chr22 39080245 39080245 1 + A G rs1056661 39080248 + 39080228 39080268 41 AATGGAGTTGTTGGGGCAGGACATGCACACAATGTGAAACA AATGGAGTTGTTGGGGCGGGACATGCACACAATGTGAAACA < 41bp 1 0.521545239118825 1 0.883171677589417 experiment 0.95690952176235 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39080248 chr22:39080245 . . 0 hm6A_associated_SNPs_22237 0 0 1 2 39080245 39080265 mRNA hsa-miR-23a TOMM22 miRanda miRanda
14034 chr22 39080245 39080245 1 + A G rs1056661 39080248 + 39080228 39080268 41 AATGGAGTTGTTGGGGCAGGACATGCACACAATGTGAAACA AATGGAGTTGTTGGGGCGGGACATGCACACAATGTGAAACA < 41bp 1 0.521545239118825 1 0.883171677589417 experiment 0.95690952176235 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 TOMM22 ENSG00000100216 UTR3 Human protein_coding chr22:39080248 chr22:39080245 . . 0 hm6A_associated_SNPs_22237 0 0 1 2 39080245 39080265 mRNA hsa-miR-23b TOMM22 miRanda miRanda
14034 chr22 39774288 39774288 1 + A G rs111613012 39774292 + 39774272 39774312 41 GAACTGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTTG GAACTGAGGGGTGATAGTGGACCAACCTCTCAAGGCTGTTG < 41bp 1 0.0574747949004558 1 0.00124567747116089 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 SYNGR1 ENSG00000100321 UTR3 Human protein_coding chr22:39774292 chr22:39774288 . . 0 hm6A_associated_SNPs_22244 0 0 1 2 39774275 39774297 mRNA hsa-miR-133a SYNGR1 miRanda miRanda
14034 chr22 39774288 39774288 1 + A G rs111613012 39774292 + 39774272 39774312 41 GAACTGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTTG GAACTGAGGGGTGATAGTGGACCAACCTCTCAAGGCTGTTG < 41bp 1 0.0574747949004558 1 0.00124567747116089 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 SYNGR1 ENSG00000100321 UTR3 Human protein_coding chr22:39774292 chr22:39774288 . . 0 hm6A_associated_SNPs_22244 0 0 1 2 39774275 39774297 mRNA hsa-miR-133b SYNGR1 miRanda miRanda
14034 chr22 39774289 39774289 1 + T C rs554611093 39774292 + 39774272 39774312 41 GAACTGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTTG GAACTGAGGGGTGATAACGGACCAACCTCTCAAGGCTGTTG < 41bp 1 0.0765905755489998 1 0.00310057401657104 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 SYNGR1 ENSG00000100321 UTR3 Human protein_coding chr22:39774292 chr22:39774289 . . 0 hm6A_associated_SNPs_22245 0 0 1 2 39774275 39774297 mRNA hsa-miR-133a SYNGR1 miRanda miRanda
14034 chr22 39774289 39774289 1 + T C rs554611093 39774292 + 39774272 39774312 41 GAACTGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTTG GAACTGAGGGGTGATAACGGACCAACCTCTCAAGGCTGTTG < 41bp 1 0.0765905755489998 1 0.00310057401657104 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 SYNGR1 ENSG00000100321 UTR3 Human protein_coding chr22:39774292 chr22:39774289 . . 0 hm6A_associated_SNPs_22245 0 0 1 2 39774275 39774297 mRNA hsa-miR-133b SYNGR1 miRanda miRanda
14034 chr22 41575128 41575128 1 + A G rs188733753 41575116 + 41575096 41575136 41 CCGTTTGTGGTTTAAAGCAAACATGCAAGATGAACCTGAGG CCGTTTGTGGTTTAAAGCAAACATGCAAGATGGACCTGAGG < 41bp 1 0.789208625797061 1 0.898145914077759 experiment 0.421582748405879 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 33 EP300 ENSG00000231993;ENSG00000232754 ncRNA_intronic Human other chr22:41575116 chr22:41575128 . . 0 hm6A_associated_SNPs_22283 0 0 1 1 41575108 41575133 mRNA hsa-miR-154 EP300 miRanda miRanda
14034 chr22 41753890 41753890 1 + G A rs573624645 41753872 + 41753852 41753892 41 CCCCCTGGGGGCAAATCAGGACACAACAGAGGGCAGAGGCC CCCCCTGGGGGCAAATCAGGACACAACAGAGGGCAGAGACC < 41bp 1 0.680881353653366 1 0.13717970252037 experiment 0.638237292693267 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 ZC3H7B ENSG00000100403 UTR3 Human protein_coding chr22:41753872 chr22:41753890 . . 0 hm6A_associated_SNPs_22293 0 0 1 1 41753888 41753914 mRNA hsa-miR-221 ZC3H7B miRanda miRanda
14034 chr22 41924807 41924807 1 + C A rs184494062 41924794 + 41924774 41924814 41 GTGGGGGGGTTCTTAAAATAACTTTTTAGCCCCCGTCTTCC GTGGGGGGGTTCTTAAAATAACTTTTTAGCCCCAGTCTTCC < 41bp 1 0.539158831335509 1 0.98334014415741 experiment 0.921682337328982 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 ACO2;POLR3H ENSG00000100412;ENSG00000100413 UTR3 Human other chr22:41924794 chr22:41924807 . . 0 hm6A_associated_SNPs_22305 0 0 1 1 41924793 41924815 mRNA hsa-miR-7 ACO2 miRanda miRanda
14034 chr22 42392152 42392152 1 + T G rs78845485 42392150 + 42392130 42392170 41 CCTAATTCCCTCTCCTCCTGACTCCTGTAGACATTCCCAAT CCTAATTCCCTCTCCTCCTGACGCCTGTAGACATTCCCAAT Direct Loss 1 0.123464181233522 1 0.000546425580978394 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 SEPT3 ENSG00000100167 UTR3 Human protein_coding chr22:42392150 chr22:42392152 . . 0 hm6A_associated_SNPs_22319 0 0 1 3 42392144 42392167 mRNA hsa-miR-1 SEPT3 miRanda miRanda
14034 chr22 42392152 42392152 1 + T G rs78845485 42392150 + 42392130 42392170 41 CCTAATTCCCTCTCCTCCTGACTCCTGTAGACATTCCCAAT CCTAATTCCCTCTCCTCCTGACGCCTGTAGACATTCCCAAT Direct Loss 1 0.123464181233522 1 0.000546425580978394 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 SEPT3 ENSG00000100167 UTR3 Human protein_coding chr22:42392150 chr22:42392152 . . 0 hm6A_associated_SNPs_22319 0 0 1 3 42392144 42392167 mRNA hsa-miR-206 SEPT3 miRanda miRanda
14034 chr22 42392152 42392152 1 + T G rs78845485 42392150 + 42392130 42392170 41 CCTAATTCCCTCTCCTCCTGACTCCTGTAGACATTCCCAAT CCTAATTCCCTCTCCTCCTGACGCCTGTAGACATTCCCAAT Direct Loss 1 0.123464181233522 1 0.000546425580978394 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 SEPT3 ENSG00000100167 UTR3 Human protein_coding chr22:42392150 chr22:42392152 . . 0 hm6A_associated_SNPs_22319 0 0 1 3 42392148 42392167 mRNA hsa-miR-613 SEPT3 miRanda miRanda
14034 chr22 42393640 42393640 1 + C G rs190607140 42393653 + 42393633 42393673 41 GTCCAAACAAACAAACAAAAACTAAACACACACACAAACCC GTCCAAAGAAACAAACAAAAACTAAACACACACACAAACCC < 41bp 1 0.0921446021528668 1 0.704722881317139 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 SEPT3 ENSG00000100167 UTR3 Human protein_coding chr22:42393653 chr22:42393640 . . 0 hm6A_associated_SNPs_22320 0 0 1 1 42393634 42393654 mRNA hsa-miR-129-5p SEPT3 miRanda miRanda
14034 chr22 43559240 43559240 1 + C A rs546066736 43559239 + 43559219 43559259 41 TAAGCTGAATAAAGTTTTTGACTTCCTTTACCATGGCCTTT TAAGCTGAATAAAGTTTTTGAATTCCTTTACCATGGCCTTT Direct Loss 1 0.0576098622276703 1 0.909473657608032 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 TSPO ENSG00000100300 UTR3 Human protein_coding chr22:43559239 chr22:43559240 . . 0 hm6A_associated_SNPs_22333 0 0 1 1 43559223 43559243 mRNA hsa-miR-224 TSPO miRanda miRanda
14034 chr22 44342515 44342515 1 + G A rs554741738 44342530 + 44342510 44342550 41 GTGCAGAGGGTCCCTTACTGACTGTTTCGTGGCCCTATTAA GTGCAAAGGGTCCCTTACTGACTGTTTCGTGGCCCTATTAA < 41bp 1 0.737508136590791 1 0.954777598381042 experiment 0.524983726818417 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 PNPLA3 ENSG00000100344 UTR3 Human protein_coding chr22:44342530 chr22:44342515 . . 0 hm6A_associated_SNPs_22335 0 0 1 1 44342515 44342536 mRNA hsa-miR-132 PNPLA3 miRanda miRanda
14034 chr22 45127662 45127662 1 + C T rs199883341 45127646 + 45127626 45127666 41 CTCACTGGCAGAGACCTGGGACTTCTTCTTCAGTGACGTGC CTCACTGGCAGAGACCTGGGACTTCTTCTTCAGTGATGTGC < 41bp 1 0.315805068136612 1 0.982389509677887 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 PRR5 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45127646 chr22:45127662 synonymous SNV . 0 hm6A_associated_SNPs_22344 0 0 1 2 45127658 45127679 mRNA hsa-miR-103 PRR5 miRanda miRanda
14034 chr22 45127662 45127662 1 + C T rs199883341 45127646 + 45127626 45127666 41 CTCACTGGCAGAGACCTGGGACTTCTTCTTCAGTGACGTGC CTCACTGGCAGAGACCTGGGACTTCTTCTTCAGTGATGTGC < 41bp 1 0.315805068136612 1 0.982389509677887 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 PRR5 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45127646 chr22:45127662 synonymous SNV . 0 hm6A_associated_SNPs_22344 0 0 1 2 45127658 45127679 mRNA hsa-miR-107 PRR5 miRanda miRanda
14034 chr22 45210633 45210633 1 + C T rs118109157 45210617 + 45210597 45210637 41 CTTCATCAAGGTCCTGTGGAACATCTTGAAGCCCCTCATCA CTTCATCAAGGTCCTGTGGAACATCTTGAAGCCCCTTATCA < 41bp 1 0.256094932103386 1 0.898492574691772 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45210617 chr22:45210633 nonsynonymous SNV . 0 hm6A_associated_SNPs_22345 0 0 0 2 45210623 45210638 mRNA hsa-miR-134 ARHGAP8 miRanda miRanda
14034 chr22 45210633 45210633 1 + C T rs118109157 45210617 + 45210597 45210637 41 CTTCATCAAGGTCCTGTGGAACATCTTGAAGCCCCTCATCA CTTCATCAAGGTCCTGTGGAACATCTTGAAGCCCCTTATCA < 41bp 1 0.256094932103386 1 0.898492574691772 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45210617 chr22:45210633 nonsynonymous SNV . 0 hm6A_associated_SNPs_22345 0 0 0 2 45210625 45210638 mRNA hsa-miR-758 ARHGAP8 miRanda miRanda
14034 chr22 45258481 45258481 1 + C G rs11183 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGGGAACACTCTGTATATTTCGAGCT < 41bp 1 0.578238914125061 1 0.876407623291016 experiment 0.843522171749879 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258481 . . 0 hm6A_associated_SNPs_22353 0 0 0 2 45258476 45258491 mRNA hsa-miR-122 PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258481 45258481 1 + C G rs11183 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGGGAACACTCTGTATATTTCGAGCT < 41bp 1 0.578238914125061 1 0.876407623291016 experiment 0.843522171749879 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258481 . . 0 hm6A_associated_SNPs_22353 0 0 0 2 45258476 45258491 mRNA hsa-miR-122 ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-let-7a ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-let-7a PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-let-7b ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-let-7b PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-let-7c ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-let-7c PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258485 45258510 mRNA hsa-let-7d ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258485 45258510 mRNA hsa-let-7d PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7e ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7e PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7f ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7f PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258509 mRNA hsa-miR-28-5p ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258509 mRNA hsa-miR-28-5p PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-miR-98 ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258489 45258510 mRNA hsa-miR-98 PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7g ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7g PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7i ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258487 45258510 mRNA hsa-let-7i PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258486 45258509 mRNA hsa-miR-708 ARHGAP8 miRanda miRanda
14034 chr22 45258495 45258495 1 + A C rs8777 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATCTTTCGAGCT < 41bp 1 0.649758433675061 1 0.891613841056824 experiment 0.700483132649877 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258495 . . 0 hm6A_associated_SNPs_22354 0 0 0 22 45258486 45258509 mRNA hsa-miR-708 PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-let-7a ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-let-7a PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-let-7b ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-let-7b PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-let-7c ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-let-7c PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258485 45258510 mRNA hsa-let-7d ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258485 45258510 mRNA hsa-let-7d PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7e ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7e PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7f ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7f PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258509 mRNA hsa-miR-28-5p ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258509 mRNA hsa-miR-28-5p PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-miR-98 ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258489 45258510 mRNA hsa-miR-98 PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7g ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7g PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7i ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258487 45258510 mRNA hsa-let-7i PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258486 45258509 mRNA hsa-miR-708 ARHGAP8 miRanda miRanda
14034 chr22 45258499 45258499 1 + C T rs201689765 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTTGAGCT < 41bp 1 0.640756103013238 1 0.89826762676239 experiment 0.718487793973523 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258499 . . 0 hm6A_associated_SNPs_22355 0 0 0 22 45258486 45258509 mRNA hsa-miR-708 PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-let-7a ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-let-7a PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-let-7b ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-let-7b PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-let-7c ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-let-7c PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258485 45258510 mRNA hsa-let-7d ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258485 45258510 mRNA hsa-let-7d PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7e ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7e PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7f ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7f PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258509 mRNA hsa-miR-28-5p ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258509 mRNA hsa-miR-28-5p PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-miR-98 ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258489 45258510 mRNA hsa-miR-98 PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7g ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7g PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7i ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258487 45258510 mRNA hsa-let-7i PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258486 45258509 mRNA hsa-miR-708 ARHGAP8 miRanda miRanda
14034 chr22 45258500 45258500 1 + G A rs6007347 45258484 + 45258464 45258504 41 AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCGAGCT AGACGTCTCTAGTGTTGCGAACACTCTGTATATTTCAAGCT < 41bp 1 0.624386055339219 1 0.900553584098816 experiment 0.751227889321562 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258484 chr22:45258500 . . 0 hm6A_associated_SNPs_22356 0 0 1 22 45258486 45258509 mRNA hsa-miR-708 PRR5-ARHGAP8 miRanda miRanda
14034 chr22 45581406 45581406 1 + C G rs191291915 45581421 + 45581401 45581441 41 TCAACCCCACGCACATGAAAACTGTGACCAAGTGACGTGCC TCAACGCCACGCACATGAAAACTGTGACCAAGTGACGTGCC < 41bp 1 0.628656809981027 1 0.935109555721283 experiment 0.742686380037945 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45581421 chr22:45581406 . . 0 hm6A_associated_SNPs_22361 0 0 1 1 45581395 45581416 mRNA hsa-miR-210 NUP50 miRanda miRanda
14034 chr22 45581536 45581536 1 + T C rs189148506 45581520 + 45581500 45581540 41 GAAGAGAAAATCGTGTGTAAACTTTGCCTTTAACTTTAGAC GAAGAGAAAATCGTGTGTAAACTTTGCCTTTAACTTCAGAC < 41bp 1 0.401606999603639 1 0.468427151441574 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45581520 chr22:45581536 . . 0 hm6A_associated_SNPs_22365 0 0 1 2 45581536 45581555 mRNA hsa-miR-374a NUP50 miRanda miRanda
14034 chr22 45581536 45581536 1 + T C rs189148506 45581520 + 45581500 45581540 41 GAAGAGAAAATCGTGTGTAAACTTTGCCTTTAACTTTAGAC GAAGAGAAAATCGTGTGTAAACTTTGCCTTTAACTTCAGAC < 41bp 1 0.401606999603639 1 0.468427151441574 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45581520 chr22:45581536 . . 0 hm6A_associated_SNPs_22365 0 0 1 2 45581536 45581555 mRNA hsa-miR-374b NUP50 miRanda miRanda
14034 chr22 45582564 45582564 1 + C A rs565582968 45582576 + 45582556 45582596 41 TGTGGCTTCCTTTTTTCCTAACATTCCCAGCAAATTTTTGC TGTGGCTTACTTTTTTCCTAACATTCCCAGCAAATTTTTGC < 41bp 1 0.582334885693843 1 0.727215886116028 experiment 0.835330228612313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45582576 chr22:45582564 . . 0 hm6A_associated_SNPs_22372 0 0 1 3 45582562 45582583 mRNA hsa-miR-1 NUP50 miRanda miRanda
14034 chr22 45582564 45582564 1 + C A rs565582968 45582576 + 45582556 45582596 41 TGTGGCTTCCTTTTTTCCTAACATTCCCAGCAAATTTTTGC TGTGGCTTACTTTTTTCCTAACATTCCCAGCAAATTTTTGC < 41bp 1 0.582334885693843 1 0.727215886116028 experiment 0.835330228612313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45582576 chr22:45582564 . . 0 hm6A_associated_SNPs_22372 0 0 1 3 45582562 45582583 mRNA hsa-miR-206 NUP50 miRanda miRanda
14034 chr22 45582564 45582564 1 + C A rs565582968 45582576 + 45582556 45582596 41 TGTGGCTTCCTTTTTTCCTAACATTCCCAGCAAATTTTTGC TGTGGCTTACTTTTTTCCTAACATTCCCAGCAAATTTTTGC < 41bp 1 0.582334885693843 1 0.727215886116028 experiment 0.835330228612313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45582576 chr22:45582564 . . 0 hm6A_associated_SNPs_22372 0 0 1 3 45582564 45582583 mRNA hsa-miR-613 NUP50 miRanda miRanda
14034 chr22 45583207 45583207 1 + C G rs547978679 45583206 + 45583186 45583226 41 ATTATGTTTTCCATGGAAGGACAAGTCTGACTGTTCATAGG ATTATGTTTTCCATGGAAGGAGAAGTCTGACTGTTCATAGG Direct Loss 1 0.559758065952721 1 0.839714646339417 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45583206 chr22:45583207 . . 0 hm6A_associated_SNPs_22376 0 0 1 2 45583201 45583221 mRNA hsa-miR-212 NUP50 miRanda miRanda
14034 chr22 45583207 45583207 1 + C G rs547978679 45583206 + 45583186 45583226 41 ATTATGTTTTCCATGGAAGGACAAGTCTGACTGTTCATAGG ATTATGTTTTCCATGGAAGGAGAAGTCTGACTGTTCATAGG Direct Loss 1 0.559758065952721 1 0.839714646339417 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45583206 chr22:45583207 . . 0 hm6A_associated_SNPs_22376 0 0 1 2 45583203 45583221 mRNA hsa-miR-132 NUP50 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996716 mRNA hsa-miR-17 FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996716 mRNA hsa-miR-20a FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996716 mRNA hsa-miR-93 FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996716 mRNA hsa-miR-106a FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996696 45996716 mRNA hsa-miR-106b FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996693 45996715 mRNA hsa-miR-302a FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996693 45996715 mRNA hsa-miR-302b FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996693 45996715 mRNA hsa-miR-302c FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996693 45996715 mRNA hsa-miR-302d FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996693 45996715 mRNA hsa-miR-372 FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996693 45996715 mRNA hsa-miR-373 FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996716 mRNA hsa-miR-20b FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996695 45996715 mRNA hsa-miR-520e FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996715 mRNA hsa-miR-520a-3p FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996715 mRNA hsa-miR-520b FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996693 45996715 mRNA hsa-miR-520c-3p FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996716 mRNA hsa-miR-519d FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996694 45996715 mRNA hsa-miR-520d-3p FBLN1 miRanda miRanda
14034 chr22 45996711 45996711 1 + A T rs59932960 45996701 + 45996681 45996721 41 CCCTGATTGTATGAAATTTGACATTTTGGCACTTTTTTTTT CCCTGATTGTATGAAATTTGACATTTTGGCTCTTTTTTTTT < 41bp 1 0.254764331613119 1 0.751613736152649 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 FBLN1 ENSG00000077942 UTR3 Human protein_coding chr22:45996701 chr22:45996711 . . 0 hm6A_associated_SNPs_22384 0 0 1 19 45996699 45996715 mRNA hsa-miR-302e FBLN1 miRanda miRanda
14034 chr22 46727236 46727236 1 + G A rs557645629 46727216 + 46727196 46727236 41 TGTCCATTTCTCTTGAGGAAACTTACCACCTTGGTTGAGCG TGTCCATTTCTCTTGAGGAAACTTACCACCTTGGTTGAGCA < 41bp 1 0.557432467234286 1 0.891335487365723 experiment 0.885135065531427 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 GTSE1 ENSG00000075218 downstream Human protein_coding chr22:46727216 chr22:46727236 . . 0 hm6A_associated_SNPs_22399 0 0 1 1 46727230 46727251 mRNA hsa-miR-346 GTSE1 miRanda miRanda
14034 chr22 46729198 46729198 1 + G A rs559303327 46729201 + 46729181 46729221 41 CAGTCCTCTGCTCACCTGAGACAAATGCATGTCTGATTGCT CAGTCCTCTGCTCACCTAAGACAAATGCATGTCTGATTGCT < 41bp 1 0.57209676953141 1 0.900844931602478 experiment 0.85580646093718 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 GTSE1;TRMU ENSG00000075218;ENSG00000100416 intergenic Human other chr22:46729201 chr22:46729198 . . 0 hm6A_associated_SNPs_22400 0 0 1 1 46729178 46729199 mRNA hsa-miR-125a-3p GTSE1 miRanda miRanda
14034 chr22 46729252 46729252 1 + A G rs9627414 46729268 + 46729248 46729288 41 ATGCAGATTCACTGAGCCAGACTAAGGCATCAGTGACTGTT ATGCGGATTCACTGAGCCAGACTAAGGCATCAGTGACTGTT < 41bp 1 0.457334013585937 1 0.880003452301025 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 GTSE1;TRMU ENSG00000075218;ENSG00000100416 intergenic Human other chr22:46729268 chr22:46729252 . . 0 hm6A_associated_SNPs_22401 0 0 0 2 46729245 46729266 mRNA hsa-miR-24 GTSE1 miRanda miRanda
14034 chr22 46729252 46729252 1 + A G rs9627414 46729268 + 46729248 46729288 41 ATGCAGATTCACTGAGCCAGACTAAGGCATCAGTGACTGTT ATGCGGATTCACTGAGCCAGACTAAGGCATCAGTGACTGTT < 41bp 1 0.457334013585937 1 0.880003452301025 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 GTSE1;TRMU ENSG00000075218;ENSG00000100416 intergenic Human other chr22:46729268 chr22:46729252 . . 0 hm6A_associated_SNPs_22401 0 0 0 2 46729244 46729268 mRNA hsa-miR-149 GTSE1 miRanda miRanda
14034 chr22 47569445 47569445 1 + C T rs150216331 47569438 + 47569418 47569458 41 ACAGACCTGGTCTAGGGCTGACAAAGACAGGGACAGCCTTT ACAGACCTGGTCTAGGGCTGACAAAGATAGGGACAGCCTTT < 41bp 1 0.353176760728168 1 0.611567795276642 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 TBC1D22A ENSG00000054611 UTR3 Human protein_coding chr22:47569438 chr22:47569445 . . 0 hm6A_associated_SNPs_22407 0 0 1 1 47569428 47569450 mRNA hsa-miR-339-5p TBC1D22A miRanda miRanda
14034 chr22 47569445 47569445 1 + C T rs150216331 47569450 + 47569430 47569470 41 TAGGGCTGACAAAGACAGGGACAGCCTTTGTTTTCTGAGAT TAGGGCTGACAAAGATAGGGACAGCCTTTGTTTTCTGAGAT < 41bp 1 0.440917661776871 1 0.337097406387329 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 TBC1D22A ENSG00000054611 UTR3 Human protein_coding chr22:47569450 chr22:47569445 . . 0 hm6A_associated_SNPs_22408 0 0 1 1 47569428 47569450 mRNA hsa-miR-339-5p TBC1D22A miRanda miRanda
14034 chr22 50282695 50282695 1 + A G rs78036496 50282712 + 50282692 50282732 41 AAAACAAGCCAGCACAACTAACTGTAGCAGAATTGTATCCA AAAGCAAGCCAGCACAACTAACTGTAGCAGAATTGTATCCA < 41bp 1 0.0472768895202881 1 0.343550145626068 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 4 ZBED4 ENSG00000100426 UTR3 Human protein_coding chr22:50282712 chr22:50282695 . . 0 hm6A_associated_SNPs_22413 0 0 1 1 50282695 50282720 mRNA hsa-miR-221 ZBED4 miRanda miRanda
14034 chr22 50321137 50321137 1 + T G rs374098759 50321121 + 50321101 50321141 41 CATTTCTTGGTTGTTCTTAAACAGACTTGTATATTTTGATA CATTTCTTGGTTGTTCTTAAACAGACTTGTATATTTGGATA < 41bp 1 0.186833277745666 1 0.951849341392517 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 CRELD2 ENSG00000184164 UTR3 Human protein_coding chr22:50321121 chr22:50321137 . . 0 hm6A_associated_SNPs_22419 0 0 1 3 50321129 50321150 mRNA hsa-miR-146a CRELD2 miRanda miRanda
14034 chr22 50321137 50321137 1 + T G rs374098759 50321121 + 50321101 50321141 41 CATTTCTTGGTTGTTCTTAAACAGACTTGTATATTTTGATA CATTTCTTGGTTGTTCTTAAACAGACTTGTATATTTGGATA < 41bp 1 0.186833277745666 1 0.951849341392517 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 CRELD2 ENSG00000184164 UTR3 Human protein_coding chr22:50321121 chr22:50321137 . . 0 hm6A_associated_SNPs_22419 0 0 1 3 50321130 50321151 mRNA hsa-miR-186 CRELD2 miRanda miRanda
14034 chr22 50321137 50321137 1 + T G rs374098759 50321121 + 50321101 50321141 41 CATTTCTTGGTTGTTCTTAAACAGACTTGTATATTTTGATA CATTTCTTGGTTGTTCTTAAACAGACTTGTATATTTGGATA < 41bp 1 0.186833277745666 1 0.951849341392517 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 CRELD2 ENSG00000184164 UTR3 Human protein_coding chr22:50321121 chr22:50321137 . . 0 hm6A_associated_SNPs_22419 0 0 1 3 50321129 50321150 mRNA hsa-miR-146b-5p CRELD2 miRanda miRanda
14034 chr22 50321137 50321137 1 + T G rs374098759 50321125 + 50321105 50321145 41 TCTTGGTTGTTCTTAAACAGACTTGTATATTTTGATACAGT TCTTGGTTGTTCTTAAACAGACTTGTATATTTGGATACAGT < 41bp 1 0.40760616863766 1 0.979512453079224 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 CRELD2 ENSG00000184164 UTR3 Human protein_coding chr22:50321125 chr22:50321137 . . 0 hm6A_associated_SNPs_22420 0 0 1 3 50321129 50321150 mRNA hsa-miR-146a CRELD2 miRanda miRanda
14034 chr22 50321137 50321137 1 + T G rs374098759 50321125 + 50321105 50321145 41 TCTTGGTTGTTCTTAAACAGACTTGTATATTTTGATACAGT TCTTGGTTGTTCTTAAACAGACTTGTATATTTGGATACAGT < 41bp 1 0.40760616863766 1 0.979512453079224 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 CRELD2 ENSG00000184164 UTR3 Human protein_coding chr22:50321125 chr22:50321137 . . 0 hm6A_associated_SNPs_22420 0 0 1 3 50321130 50321151 mRNA hsa-miR-186 CRELD2 miRanda miRanda
14034 chr22 50321137 50321137 1 + T G rs374098759 50321125 + 50321105 50321145 41 TCTTGGTTGTTCTTAAACAGACTTGTATATTTTGATACAGT TCTTGGTTGTTCTTAAACAGACTTGTATATTTGGATACAGT < 41bp 1 0.40760616863766 1 0.979512453079224 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 33 CRELD2 ENSG00000184164 UTR3 Human protein_coding chr22:50321125 chr22:50321137 . . 0 hm6A_associated_SNPs_22420 0 0 1 3 50321129 50321150 mRNA hsa-miR-146b-5p CRELD2 miRanda miRanda
14034 chrX 7269594 7269594 1 + C G rs781142436 7269612 + 7269592 7269632 41 ATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT ATGATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT < 41bp 1 0.728315120698087 1 0.916468679904938 experiment 0.543369758603826 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 STS ENSG00000101846 UTR3 Human protein_coding chrX:7269612 chrX:7269594 . . 0 hm6A_associated_SNPs_22470 0 0 0 7 7269573 7269594 mRNA hsa-miR-25 STS miRanda miRanda
14034 chrX 7269594 7269594 1 + C G rs781142436 7269612 + 7269592 7269632 41 ATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT ATGATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT < 41bp 1 0.728315120698087 1 0.916468679904938 experiment 0.543369758603826 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 STS ENSG00000101846 UTR3 Human protein_coding chrX:7269612 chrX:7269594 . . 0 hm6A_associated_SNPs_22470 0 0 0 7 7269573 7269594 mRNA hsa-miR-32 STS miRanda miRanda
14034 chrX 7269594 7269594 1 + C G rs781142436 7269612 + 7269592 7269632 41 ATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT ATGATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT < 41bp 1 0.728315120698087 1 0.916468679904938 experiment 0.543369758603826 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 STS ENSG00000101846 UTR3 Human protein_coding chrX:7269612 chrX:7269594 . . 0 hm6A_associated_SNPs_22470 0 0 0 7 7269573 7269594 mRNA hsa-miR-92a STS miRanda miRanda
14034 chrX 7269594 7269594 1 + C G rs781142436 7269612 + 7269592 7269632 41 ATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT ATGATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT < 41bp 1 0.728315120698087 1 0.916468679904938 experiment 0.543369758603826 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 STS ENSG00000101846 UTR3 Human protein_coding chrX:7269612 chrX:7269594 . . 0 hm6A_associated_SNPs_22470 0 0 0 7 7269570 7269594 mRNA hsa-miR-363 STS miRanda miRanda
14034 chrX 7269594 7269594 1 + C G rs781142436 7269612 + 7269592 7269632 41 ATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT ATGATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT < 41bp 1 0.728315120698087 1 0.916468679904938 experiment 0.543369758603826 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 STS ENSG00000101846 UTR3 Human protein_coding chrX:7269612 chrX:7269594 . . 0 hm6A_associated_SNPs_22470 0 0 0 7 7269574 7269594 mRNA hsa-miR-367 STS miRanda miRanda
14034 chrX 7269594 7269594 1 + C G rs781142436 7269612 + 7269592 7269632 41 ATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT ATGATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT < 41bp 1 0.728315120698087 1 0.916468679904938 experiment 0.543369758603826 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 STS ENSG00000101846 UTR3 Human protein_coding chrX:7269612 chrX:7269594 . . 0 hm6A_associated_SNPs_22470 0 0 0 7 7269570 7269594 mRNA hsa-miR-92b STS miRanda miRanda
14034 chrX 7269594 7269594 1 + C G rs781142436 7269612 + 7269592 7269632 41 ATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT ATGATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATT < 41bp 1 0.728315120698087 1 0.916468679904938 experiment 0.543369758603826 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 STS ENSG00000101846 UTR3 Human protein_coding chrX:7269612 chrX:7269594 . . 0 hm6A_associated_SNPs_22470 0 0 0 7 7269591 7269615 mRNA hsa-miR-590-5p STS miRanda miRanda
14034 chrX 16860229 16860229 1 + C T rs751139259 16860217 + 16860197 16860237 41 GGGCCGACCATTACAAGGGAACTTTGTTCTGACGATGGTTC GGGCCGACCATTACAAGGGAACTTTGTTCTGATGATGGTTC < 41bp 1 0.771164846474793 1 0.636335015296936 experiment 0.457670307050414 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TXLNG ENSG00000086712 UTR3 Human protein_coding chrX:16860217 chrX:16860229 . . 0 hm6A_associated_SNPs_22510 0 0 1 1 16860228 16860248 mRNA hsa-miR-377 TXLNG miRanda miRanda
14034 chrX 16860236 16860236 1 + T G rs754710871 16860217 + 16860197 16860237 41 GGGCCGACCATTACAAGGGAACTTTGTTCTGACGATGGTTC GGGCCGACCATTACAAGGGAACTTTGTTCTGACGATGGTGC < 41bp 1 0.785341848411607 1 0.806597769260406 experiment 0.429316303176787 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 TXLNG ENSG00000086712 UTR3 Human protein_coding chrX:16860217 chrX:16860236 . . 0 hm6A_associated_SNPs_22511 0 0 1 1 16860228 16860248 mRNA hsa-miR-377 TXLNG miRanda miRanda
14034 chrX 19379148 19379148 1 + G A rs56039350 19379152 + 19379132 19379172 41 CTATTTCAAATGACTCGGGAACAAGAAGGCAGGCTGCAGTT CTATTTCAAATGACTCAGGAACAAGAAGGCAGGCTGCAGTT < 41bp 1 0.743333275728898 1 0.105403333902359 experiment 0.513333448542204 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 PDHA1 ENSG00000131828 UTR3 Human protein_coding chrX:19379152 chrX:19379148 . . 0 hm6A_associated_SNPs_22519 0 0 1 1 19379124 19379148 mRNA hsa-miR-496 PDHA1 miRanda miRanda
14034 chrX 21901146 21901146 1 + C T rs41297319 21901132 + 21901112 21901152 41 GGTGGAATTAATTGGGAAAAACTTCTTACAAAAGCATCATT GGTGGAATTAATTGGGAAAAACTTCTTACAAAAGTATCATT < 41bp 1 0.751808406145748 1 0.783166766166687 experiment 0.496383187708504 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 MBTPS2 ENSG00000012174 UTR3 Human protein_coding chrX:21901132 chrX:21901146 . . 0 hm6A_associated_SNPs_22521 0 0 1 1 21901141 21901163 mRNA hsa-miR-590-3p MBTPS2 miRanda miRanda
14034 chrX 23804218 23804218 1 + A G rs2071030 23804231 + 23804211 23804251 41 TCTTAATATATTTGAAAAAAACTTCATTCTCGTGAGTCATT TCTTAATGTATTTGAAAAAAACTTCATTCTCGTGAGTCATT < 41bp 1 0.560135055050172 1 0.377233505249023 experiment 0.879729889899656 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 SAT1 ENSG00000130066 UTR3 Human protein_coding chrX:23804231 chrX:23804218 . . 0 hm6A_associated_SNPs_22526 0 0 1 3 23804205 23804226 mRNA hsa-miR-26a SAT1 miRanda miRanda
14034 chrX 23804218 23804218 1 + A G rs2071030 23804231 + 23804211 23804251 41 TCTTAATATATTTGAAAAAAACTTCATTCTCGTGAGTCATT TCTTAATGTATTTGAAAAAAACTTCATTCTCGTGAGTCATT < 41bp 1 0.560135055050172 1 0.377233505249023 experiment 0.879729889899656 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 SAT1 ENSG00000130066 UTR3 Human protein_coding chrX:23804231 chrX:23804218 . . 0 hm6A_associated_SNPs_22526 0 0 1 3 23804206 23804226 mRNA hsa-miR-26b SAT1 miRanda miRanda
14034 chrX 23804218 23804218 1 + A G rs2071030 23804231 + 23804211 23804251 41 TCTTAATATATTTGAAAAAAACTTCATTCTCGTGAGTCATT TCTTAATGTATTTGAAAAAAACTTCATTCTCGTGAGTCATT < 41bp 1 0.560135055050172 1 0.377233505249023 experiment 0.879729889899656 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 SAT1 ENSG00000130066 UTR3 Human protein_coding chrX:23804231 chrX:23804218 . . 0 hm6A_associated_SNPs_22526 0 0 1 3 23804209 23804226 mRNA hsa-miR-1297 SAT1 miRanda miRanda
14034 chrX 40450585 40450585 1 + C G rs9014 40450568 + 40450548 40450588 41 GGTGATGGTGAAGGGAGTGAACAAACTGGCTCTACCCCCAG GGTGATGGTGAAGGGAGTGAACAAACTGGCTCTACCCGCAG < 41bp 1 0.509970136451994 1 0.366733729839325 experiment 0.980059727096011 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40450568 chrX:40450585 nonsynonymous SNV 0.910 0 hm6A_associated_SNPs_22539 1 0 1 1 40450577 40450599 mRNA hsa-miR-425 ATP6AP2 miRanda miRanda
14034 chrX 40460040 40460040 1 + T C rs7691 40460024 + 40460004 40460044 41 TAACTTTCAGTTTGCAGATGACATGTACAGTCTTTATGGTG TAACTTTCAGTTTGCAGATGACATGTACAGTCTTTACGGTG < 41bp 1 0.665622257500601 1 0.0049891471862793 experiment 0.668755484998799 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40460024 chrX:40460040 synonymous SNV . 0 hm6A_associated_SNPs_22540 1 0 1 2 40460037 40460061 mRNA hsa-miR-197 ATP6AP2 miRanda miRanda
14034 chrX 40460040 40460040 1 + T C rs7691 40460024 + 40460004 40460044 41 TAACTTTCAGTTTGCAGATGACATGTACAGTCTTTATGGTG TAACTTTCAGTTTGCAGATGACATGTACAGTCTTTACGGTG < 41bp 1 0.665622257500601 1 0.0049891471862793 experiment 0.668755484998799 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40460024 chrX:40460040 synonymous SNV . 0 hm6A_associated_SNPs_22540 1 0 1 2 40460029 40460055 mRNA hsa-miR-217 ATP6AP2 miRanda miRanda
14034 chrX 46406303 46406303 1 + T C rs5952905 46406322 + 46406302 46406342 41 TTTATGCAGAAAGAGAAGGGACTGATGATTTGAATGTGACC TCTATGCAGAAAGAGAAGGGACTGATGATTTGAATGTGACC < 41bp 1 0.77528396280468 1 0.858497083187103 experiment 0.449432074390639 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 ZNF674-AS1 ENSG00000230844 ncRNA_exonic Human lincRNA chrX:46406322 chrX:46406303 . . 0 hm6A_associated_SNPs_22555 0 0 1 3 46406292 46406313 mRNA hsa-miR-544 LOC401588 miRanda miRanda
14034 chrX 46406303 46406303 1 + T C rs5952905 46406322 + 46406302 46406342 41 TTTATGCAGAAAGAGAAGGGACTGATGATTTGAATGTGACC TCTATGCAGAAAGAGAAGGGACTGATGATTTGAATGTGACC < 41bp 1 0.77528396280468 1 0.858497083187103 experiment 0.449432074390639 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 ZNF674-AS1 ENSG00000230844 ncRNA_exonic Human lincRNA chrX:46406322 chrX:46406303 . . 0 hm6A_associated_SNPs_22555 0 0 1 3 46406303 46406325 lncRNA hsa-miR-2114-5p ZNF674-AS1 miRanda starBase2
14034 chrX 46406303 46406303 1 + T C rs5952905 46406322 + 46406302 46406342 41 TTTATGCAGAAAGAGAAGGGACTGATGATTTGAATGTGACC TCTATGCAGAAAGAGAAGGGACTGATGATTTGAATGTGACC < 41bp 1 0.77528396280468 1 0.858497083187103 experiment 0.449432074390639 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 ZNF674-AS1 ENSG00000230844 ncRNA_exonic Human lincRNA chrX:46406322 chrX:46406303 . . 0 hm6A_associated_SNPs_22555 0 0 1 3 46406302 46406320 lncRNA hsa-miR-942-5p ZNF674-AS1 miRanda starBase2
14034 chrX 46740032 46740032 1 + G A rs4239962 46740035 + 46740015 46740055 41 GGGCTATCAAGAGAATTGGAACAAAACCTTGTGACTTTTAG GGGCTATCAAGAGAATTAGAACAAAACCTTGTGACTTTTAG < 41bp 1 0.740394276250163 1 0.15246045589447 experiment 0.519211447499673 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 RP2 ENSG00000102218 UTR3 Human protein_coding chrX:46740035 chrX:46740032 . . 0 hm6A_associated_SNPs_22562 1 0 1 1 46740029 46740052 mRNA hsa-miR-224 RP2 miRanda miRanda
14034 chrX 48759551 48759551 1 + A C rs782784866 48759540 + 48759520 48759560 41 AAAGTTGGACCGGAGCCATGACAAGTCGGACAGGGGCCATG AAAGTTGGACCGGAGCCATGACAAGTCGGACCGGGGCCATG < 41bp 1 0.525918387729283 1 0.979800820350647 experiment 0.948163224541434 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759540 chrX:48759551 synonymous SNV . 0 hm6A_associated_SNPs_22594 0 0 1 1 48759533 48759555 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759551 48759551 1 + A C rs782784866 48759561 + 48759541 48759581 41 CAAGTCGGACAGGGGCCATGACAAGTCGGACCGCAGCCATG CAAGTCGGACCGGGGCCATGACAAGTCGGACCGCAGCCATG < 41bp 1 0.706308310024165 1 0.990836083889008 experiment 0.58738337995167 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 11 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759561 chrX:48759551 synonymous SNV . 0 hm6A_associated_SNPs_22595 0 0 1 1 48759533 48759555 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759554 48759554 1 + G A rs781893158 48759540 + 48759520 48759560 41 AAAGTTGGACCGGAGCCATGACAAGTCGGACAGGGGCCATG AAAGTTGGACCGGAGCCATGACAAGTCGGACAGGAGCCATG < 41bp 1 0.514575247838982 1 0.986388027667999 experiment 0.970849504322036 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759540 chrX:48759554 nonsynonymous SNV 0.099 1 hm6A_associated_SNPs_22596 0 0 1 1 48759533 48759555 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759554 48759554 1 + G A rs781893158 48759561 + 48759541 48759581 41 CAAGTCGGACAGGGGCCATGACAAGTCGGACCGCAGCCATG CAAGTCGGACAGGAGCCATGACAAGTCGGACCGCAGCCATG < 41bp 1 0.667916198469273 1 0.992866396903992 experiment 0.664167603061455 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 14 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759561 chrX:48759554 nonsynonymous SNV 0.099 1 hm6A_associated_SNPs_22597 0 0 1 1 48759533 48759555 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759642 48759642 1 + G C rs782192919 48759633 + 48759613 48759653 41 CCGGGGCCACGACAAGTCTGACAGGGATCGAGAGCGTGGCT CCGGGGCCACGACAAGTCTGACAGGGATCCAGAGCGTGGCT < 41bp 1 0.560358307587811 1 0.955307245254517 experiment 0.879283384824378 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759633 chrX:48759642 nonsynonymous SNV 0.973 3 hm6A_associated_SNPs_22598 0 0 1 1 48759638 48759660 mRNA hsa-miR-153 PQBP1 miRanda miRanda
14034 chrX 48759642 48759642 1 + G C rs782192919 48759657 + 48759637 48759677 41 GGATCGAGAGCGTGGCTATGACAAGGTAGACAGAGAGAGAG GGATCCAGAGCGTGGCTATGACAAGGTAGACAGAGAGAGAG < 41bp 1 0.608854625404973 1 0.90950882434845 experiment 0.782290749190054 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759657 chrX:48759642 nonsynonymous SNV 0.973 3 hm6A_associated_SNPs_22599 0 0 1 1 48759638 48759660 mRNA hsa-miR-153 PQBP1 miRanda miRanda
14034 chrX 54949702 54949702 1 + A G rs201610298 54949689 + 54949669 54949709 41 AAGGCCAAATTACCAATGAGACAGCCAGTATCCACACCACA AAGGCCAAATTACCAATGAGACAGCCAGTATCCGCACCACA < 41bp 1 0.254573632100931 1 0.812826871871948 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 TRO ENSG00000067445 CDS Human protein_coding chrX:54949689 chrX:54949702 nonsynonymous SNV 0.018 0 hm6A_associated_SNPs_22609 0 0 0 1 54949698 54949718 mRNA hsa-miR-485-5p TRO miRanda miRanda
14034 chrX 56593368 56593368 1 + T A rs757794653 56593350 + 56593330 56593370 41 AGAAAAATGCATTAAAAATGACTAAAAAAAATAAAAAATTA AGAAAAATGCATTAAAAATGACTAAAAAAAATAAAAAAATA < 41bp 1 0.543095373202394 1 0.0979399085044861 experiment 0.913809253595211 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 UBQLN2 ENSG00000188021 UTR3 Human protein_coding chrX:56593350 chrX:56593368 . . 0 hm6A_associated_SNPs_22612 0 0 1 1 56593350 56593369 mRNA hsa-miR-590-3p UBQLN2 miRanda miRanda
14034 chrX 69640366 69640366 1 + T G rs749696473 69640356 + 69640336 69640376 41 ACTGAAGAGAGAACCAACTGACTTTCCTATTGACTCATCAG ACTGAAGAGAGAACCAACTGACTTTCCTATGGACTCATCAG < 41bp 1 0.789072872093841 1 0.98779708147049 experiment 0.421854255812318 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 KIF4A ENSG00000090889 UTR3 Human protein_coding chrX:69640356 chrX:69640366 . . 0 hm6A_associated_SNPs_22629 0 0 1 1 69640366 69640389 mRNA hsa-miR-485-5p KIF4A miRanda miRanda
14034 chrX 69640366 69640366 1 + T G rs749696473 69640368 + 69640348 69640388 41 ACCAACTGACTTTCCTATTGACTCATCAGGAACCAGTCCTC ACCAACTGACTTTCCTATGGACTCATCAGGAACCAGTCCTC < 41bp 1 0.798287916932378 1 0.992078423500061 experiment 0.403424166135243 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 KIF4A ENSG00000090889 UTR3 Human protein_coding chrX:69640368 chrX:69640366 . . 0 hm6A_associated_SNPs_22630 0 0 1 1 69640366 69640389 mRNA hsa-miR-485-5p KIF4A miRanda miRanda
14034 chrX 69722436 69722436 1 + T G rs73634832 69722424 + 69722404 69722444 41 GAGCCATTGTTTTCATAAAAACCAAGCAGAAGTGAAGAGAA GAGCCATTGTTTTCATAAAAACCAAGCAGAAGGGAAGAGAA < 41bp 1 0.773154914971309 1 0.914106428623199 experiment 0.453690170057383 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 DLG3 ENSG00000082458 UTR3 Human protein_coding chrX:69722424 chrX:69722436 . . 0 hm6A_associated_SNPs_22634 0 0 1 1 69722427 69722452 mRNA hsa-miR-211 DLG3 miRanda miRanda
14034 chrX 70764722 70764722 1 + T C rs140514840 70764716 + 70764696 70764736 41 GAGCCTTTCTGCTGAGCTAGACCATCTTTATAACACTGGGC GAGCCTTTCTGCTGAGCTAGACCATCCTTATAACACTGGGC < 41bp 1 0.541565988315749 1 0.406461596488953 experiment 0.916868023368503 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 27 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764716 chrX:70764722 . . 0 hm6A_associated_SNPs_22639 0 0 1 3 70764713 70764735 mRNA hsa-miR-199a-5p OGT miRanda miRanda
14034 chrX 70764722 70764722 1 + T C rs140514840 70764716 + 70764696 70764736 41 GAGCCTTTCTGCTGAGCTAGACCATCTTTATAACACTGGGC GAGCCTTTCTGCTGAGCTAGACCATCCTTATAACACTGGGC < 41bp 1 0.541565988315749 1 0.406461596488953 experiment 0.916868023368503 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 27 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764716 chrX:70764722 . . 0 hm6A_associated_SNPs_22639 0 0 1 3 70764712 70764735 mRNA hsa-miR-199b-5p OGT miRanda miRanda
14034 chrX 70764722 70764722 1 + T C rs140514840 70764716 + 70764696 70764736 41 GAGCCTTTCTGCTGAGCTAGACCATCTTTATAACACTGGGC GAGCCTTTCTGCTGAGCTAGACCATCCTTATAACACTGGGC < 41bp 1 0.541565988315749 1 0.406461596488953 experiment 0.916868023368503 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 27 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764716 chrX:70764722 . . 0 hm6A_associated_SNPs_22639 0 0 1 3 70764710 70764728 mRNA hsa-miR-340 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764844 70764867 mRNA hsa-miR-15a OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764845 70764867 mRNA hsa-miR-16 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764844 70764866 mRNA hsa-miR-103 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764844 70764866 mRNA hsa-miR-107 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764833 70764854 mRNA hsa-miR-183 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764844 70764867 mRNA hsa-miR-15b OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764847 70764867 mRNA hsa-miR-195 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764844 70764867 mRNA hsa-miR-424 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764847 70764867 mRNA hsa-miR-497 OGT miRanda miRanda
14034 chrX 70764847 70764847 1 + G T rs60747777 70764830 + 70764810 70764850 41 CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGGTGC CGCCTGTGATTTGGCTCAAGACTCCTATATGATGCAGTTGC < 41bp 1 0.407423326303444 1 0.509741067886353 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 BCYRN1 ENSG00000147162 intronic Human protein_coding chrX:70764830 chrX:70764847 . . 0 hm6A_associated_SNPs_22640 0 0 1 10 70764845 70764867 mRNA hsa-miR-503 OGT miRanda miRanda
14034 chrX 70795609 70795609 1 + A G rs58477970 70795589 + 70795569 70795609 41 CAGGTAATATGTCTTGGAAGACTTAATTCTGATTAGAGATA CAGGTAATATGTCTTGGAAGACTTAATTCTGATTAGAGATG < 41bp 1 0.757727530448273 1 0.821051597595215 experiment 0.484544939103454 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 41 BCYRN1 ENSG00000147162 UTR3 Human protein_coding chrX:70795589 chrX:70795609 . . 0 hm6A_associated_SNPs_22641 0 0 1 1 70795602 70795624 mRNA hsa-miR-145 OGT miRanda miRanda
14034 chrX 73040561 73040561 1 - A T rs764252085 73040542 - 73040522 73040562 41 ATCTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC AACTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC < 41bp 1 0.563080147132628 1 0.172653526067734 experiment 0.873839705734744 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040542 chrX:73040561 . . 0 hm6A_associated_SNPs_22643 0 0 1 4 73040560 73040582 lncRNA hsa-miR-135a-5p XIST miRanda starBase2
14034 chrX 73040561 73040561 1 - A T rs764252085 73040542 - 73040522 73040562 41 ATCTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC AACTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC < 41bp 1 0.563080147132628 1 0.172653526067734 experiment 0.873839705734744 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040542 chrX:73040561 . . 0 hm6A_associated_SNPs_22643 0 0 1 4 73040560 73040582 lncRNA hsa-miR-135b-5p XIST miRanda starBase2
14034 chrX 73040561 73040561 1 - A T rs764252085 73040542 - 73040522 73040562 41 ATCTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC AACTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC < 41bp 1 0.563080147132628 1 0.172653526067734 experiment 0.873839705734744 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040542 chrX:73040561 . . 0 hm6A_associated_SNPs_22643 0 0 1 4 73040550 73040568 lncRNA hsa-miR-489-3p XIST miRanda starBase2
14034 chrX 73040561 73040561 1 - A T rs764252085 73040542 - 73040522 73040562 41 ATCTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC AACTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC < 41bp 1 0.563080147132628 1 0.172653526067734 experiment 0.873839705734744 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040542 chrX:73040561 . . 0 hm6A_associated_SNPs_22643 0 0 1 4 73040547 73040570 lncRNA hsa-miR-758-3p XIST miRanda starBase2
14034 chrX 73040640 73040640 1 - G C rs369296409 73040660 - 73040640 73040680 41 GAAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATC GAAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATG < 41bp 1 0.295499113220593 1 0.910125613212585 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 41 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040660 chrX:73040640 . . 0 hm6A_associated_SNPs_22644 0 0 1 2 73040621 73040642 lncRNA hsa-miR-545-3p XIST miRanda starBase2
14034 chrX 73040640 73040640 1 - G C rs369296409 73040660 - 73040640 73040680 41 GAAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATC GAAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATG < 41bp 1 0.295499113220593 1 0.910125613212585 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 41 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040660 chrX:73040640 . . 0 hm6A_associated_SNPs_22644 0 0 1 2 73040629 73040649 lncRNA hsa-miR-888-5p XIST miRanda starBase2
14034 chrX 73041815 73041815 1 - G A rs57356627 73041830 - 73041810 73041850 41 TAAATAGATCTCTTTCAGAAACAATCCTCAGATAACGCATA TAAATAGATCTCTTTCAGAAACAATCCTCAGATAATGCATA < 41bp 1 0.383782107665624 1 0.0629956424236298 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 36 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041830 chrX:73041815 . . 0 hm6A_associated_SNPs_22645 0 0 1 1 73041798 73041821 lncRNA hsa-miR-136-5p XIST miRanda starBase2
14034 chrX 73042022 73042022 1 - A C rs780532376 73042031 - 73042011 73042051 41 TCCATCCCTCATGAAAAATGACTGACCACTGCTGGGCAGCA TCCATCCCTCATGAAAAATGACTGACCACGGCTGGGCAGCA < 41bp 1 0.470874464052581 1 0.842449128627777 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042031 chrX:73042022 . . 0 hm6A_associated_SNPs_22646 0 0 1 2 73042008 73042029 lncRNA hsa-miR-370-3p XIST miRanda starBase2
14034 chrX 73042022 73042022 1 - A C rs780532376 73042031 - 73042011 73042051 41 TCCATCCCTCATGAAAAATGACTGACCACTGCTGGGCAGCA TCCATCCCTCATGAAAAATGACTGACCACGGCTGGGCAGCA < 41bp 1 0.470874464052581 1 0.842449128627777 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042031 chrX:73042022 . . 0 hm6A_associated_SNPs_22646 0 0 1 2 73042008 73042029 lncRNA hsa-miR-6893-3p XIST miRanda starBase2
14034 chrX 73045745 73045745 1 - G A rs41303699 73045754 - 73045734 73045774 41 TAAAGATGAGAGAACCTGGGACTGTTGAGCATGTTTAATAC TAAAGATGAGAGAACCTGGGACTGTTGAGTATGTTTAATAC < 41bp 1 0.77736745263369 1 0.855140447616577 experiment 0.44526509473262 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045754 chrX:73045745 . . 0 hm6A_associated_SNPs_22650 0 0 1 1 73045724 73045748 lncRNA hsa-miR-561-5p XIST miRanda starBase2
14034 chrX 73045801 73045801 1 - G A rs12009304 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTTCTG < 41bp 1 0.715844523974458 1 0.831025242805481 experiment 0.568310952051085 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045801 . . 0 hm6A_associated_SNPs_22651 0 0 1 1 73045796 73045817 lncRNA hsa-miR-665 XIST miRanda starBase2
14034 chrX 73045807 73045807 1 - C T rs180926896 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTGGACTGTGCCAACACTACTCCTG < 41bp 1 0.71824068692836 1 0.798673510551453 experiment 0.56351862614328 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045807 . . 0 hm6A_associated_SNPs_22652 0 0 1 1 73045796 73045817 lncRNA hsa-miR-665 XIST miRanda starBase2
14034 chrX 73045809 73045809 1 - T C rs16992442 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTGGACTGTGCCAGCGCTACTCCTG < 41bp 1 0.72535111372096 1 0.693407654762268 experiment 0.54929777255808 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045809 . . 0 hm6A_associated_SNPs_22653 0 0 1 3 73045796 73045817 lncRNA hsa-miR-665 XIST miRanda starBase2
14034 chrX 73045809 73045809 1 - T C rs16992442 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTGGACTGTGCCAGCGCTACTCCTG < 41bp 1 0.72535111372096 1 0.693407654762268 experiment 0.54929777255808 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045809 . . 0 hm6A_associated_SNPs_22653 0 0 1 3 73045808 73045832 lncRNA hsa-miR-1271-5p XIST miRanda starBase2
14034 chrX 73045809 73045809 1 - T C rs16992442 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTGGACTGTGCCAGCGCTACTCCTG < 41bp 1 0.72535111372096 1 0.693407654762268 experiment 0.54929777255808 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045809 . . 0 hm6A_associated_SNPs_22653 0 0 1 3 73045808 73045835 lncRNA hsa-miR-96-5p XIST miRanda starBase2
14034 chrX 73046774 73046774 1 - C A rs191884965 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGATTTGGATG < 41bp 1 0.517645093924213 1 0.737101793289185 experiment 0.964709812151574 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046774 . . 0 hm6A_associated_SNPs_22657 0 0 1 1 73046772 73046795 lncRNA hsa-miR-510-5p XIST miRanda starBase2
14034 chrX 75397944 75397944 1 + G T rs191283808 75397932 + 75397912 75397952 41 TTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTT TTGTATGAACTGGTCTAAAGACTGTTAGTGGGTTGTTAGTT < 41bp 1 0.732362636161785 1 0.96099328994751 experiment 0.53527472767643 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 PBDC1 ENSG00000102390 UTR3 Human protein_coding chrX:75397932 chrX:75397944 . . 0 hm6A_associated_SNPs_22659 0 0 1 1 75397944 75397964 mRNA hsa-miR-873 CXorf26 miRanda miRanda
14034 chrX 77381571 77381571 1 + A G rs185867522 77381554 + 77381534 77381574 41 TTGAATTTTTTAGTGACTAAACCATTGTGCATTCTAGAGTG TTGAATTTTTTAGTGACTAAACCATTGTGCATTCTAGGGTG < 41bp 1 0.798757714300078 1 0.00368282198905945 experiment 0.402484571399844 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 38 PGK1 ENSG00000102144 UTR3 Human protein_coding chrX:77381554 chrX:77381571 . . 0 hm6A_associated_SNPs_22668 0 0 1 1 77381559 77381580 mRNA hsa-miR-367 PGK1 miRanda miRanda
14034 chrX 80553229 80553229 1 + C T rs1044828 80553243 + 80553223 80553263 41 AATTTCCTATCGTAATTATAACATTCCCATTCTTTTGTAGA AATTTCTTATCGTAATTATAACATTCCCATTCTTTTGTAGA < 41bp 1 0.678879903957064 1 0.0506033897399902 experiment 0.642240192085872 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 SH3BGRL ENSG00000131171 UTR3 Human protein_coding chrX:80553243 chrX:80553229 . . 0 hm6A_associated_SNPs_22669 0 0 1 2 80553222 80553243 mRNA hsa-miR-374a SH3BGRL miRanda miRanda
14034 chrX 80553229 80553229 1 + C T rs1044828 80553243 + 80553223 80553263 41 AATTTCCTATCGTAATTATAACATTCCCATTCTTTTGTAGA AATTTCTTATCGTAATTATAACATTCCCATTCTTTTGTAGA < 41bp 1 0.678879903957064 1 0.0506033897399902 experiment 0.642240192085872 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 SH3BGRL ENSG00000131171 UTR3 Human protein_coding chrX:80553243 chrX:80553229 . . 0 hm6A_associated_SNPs_22669 0 0 1 2 80553222 80553243 mRNA hsa-miR-374b SH3BGRL miRanda miRanda
14034 chrX 84344449 84344449 1 + C A rs182282044 84344436 + 84344416 84344456 41 GAATTTTTATGTCATTATTGACTCTTCACCACTCTCTCCTT GAATTTTTATGTCATTATTGACTCTTCACCACTATCTCCTT < 41bp 1 0.474610997088902 1 0.000258475542068481 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 APOOL ENSG00000155008;ENSG00000184788 intergenic Human other chrX:84344436 chrX:84344449 . . 0 hm6A_associated_SNPs_22671 0 0 1 1 84344434 84344455 mRNA hsa-miR-185 APOOL miRanda miRanda
14034 chrX 101972439 101972439 1 + A G rs3813183 101972430 + 101972410 101972450 41 ATTTTTTAATGCTGATGTTAACTTTGTCAAACTCTTGTTTT ATTTTTTAATGCTGATGTTAACTTTGTCAGACTCTTGTTTT < 41bp 1 0.484129798455607 1 0.674105882644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 UTR3 Human protein_coding chrX:101972430 chrX:101972439 . . 0 hm6A_associated_SNPs_22681 0 0 1 2 101972435 101972454 mRNA hsa-miR-371-5p GPRASP2 miRanda miRanda
14034 chrX 101972439 101972439 1 + A G rs3813183 101972430 + 101972410 101972450 41 ATTTTTTAATGCTGATGTTAACTTTGTCAAACTCTTGTTTT ATTTTTTAATGCTGATGTTAACTTTGTCAGACTCTTGTTTT < 41bp 1 0.484129798455607 1 0.674105882644653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 UTR3 Human protein_coding chrX:101972430 chrX:101972439 . . 0 hm6A_associated_SNPs_22681 0 0 1 2 101972425 101972447 mRNA hsa-miR-335 GPRASP2 miRanda miRanda
14034 chrX 101972439 101972439 1 + A G rs3813183 101972440 + 101972420 101972460 41 GCTGATGTTAACTTTGTCAAACTCTTGTTTTGAGCTGGATC GCTGATGTTAACTTTGTCAGACTCTTGTTTTGAGCTGGATC < 41bp 1 0.569691568014228 1 0.738301277160645 experiment 0.860616863971544 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 UTR3 Human protein_coding chrX:101972440 chrX:101972439 . . 0 hm6A_associated_SNPs_22682 0 0 1 2 101972435 101972454 mRNA hsa-miR-371-5p GPRASP2 miRanda miRanda
14034 chrX 101972439 101972439 1 + A G rs3813183 101972440 + 101972420 101972460 41 GCTGATGTTAACTTTGTCAAACTCTTGTTTTGAGCTGGATC GCTGATGTTAACTTTGTCAGACTCTTGTTTTGAGCTGGATC < 41bp 1 0.569691568014228 1 0.738301277160645 experiment 0.860616863971544 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 UTR3 Human protein_coding chrX:101972440 chrX:101972439 . . 0 hm6A_associated_SNPs_22682 0 0 1 2 101972425 101972447 mRNA hsa-miR-335 GPRASP2 miRanda miRanda
14034 chrX 102472097 102472097 1 + G A rs150729695 102472101 + 102472081 102472121 41 ATAATGTGTCATAACCGTAAACAATAAACAATATCAAGATA ATAATGTGTCATAACCATAAACAATAAACAATATCAAGATA < 41bp 1 0.703619517925713 1 0.0623034536838531 experiment 0.592760964148574 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 BEX4 ENSG00000102409 UTR3 Human protein_coding chrX:102472101 chrX:102472097 . . 0 hm6A_associated_SNPs_22685 0 0 1 2 102472095 102472116 mRNA hsa-miR-190 BEX4 miRanda miRanda
14034 chrX 102472097 102472097 1 + G A rs150729695 102472101 + 102472081 102472121 41 ATAATGTGTCATAACCGTAAACAATAAACAATATCAAGATA ATAATGTGTCATAACCATAAACAATAAACAATATCAAGATA < 41bp 1 0.703619517925713 1 0.0623034536838531 experiment 0.592760964148574 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 BEX4 ENSG00000102409 UTR3 Human protein_coding chrX:102472101 chrX:102472097 . . 0 hm6A_associated_SNPs_22685 0 0 1 2 102472095 102472116 mRNA hsa-miR-190b BEX4 miRanda miRanda
14034 chrX 105922626 105922626 1 + C T rs7881828 105922606 + 105922586 105922626 41 ATAATTGTGTGTAAATGTTAACTAAACAGTGGATTCCTCTC ATAATTGTGTGTAAATGTTAACTAAACAGTGGATTCCTCTT < 41bp 1 0.327185251895623 1 0.0642872750759125 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 41 CXorf57 ENSG00000147231 UTR3 Human protein_coding chrX:105922606 chrX:105922626 . . 0 hm6A_associated_SNPs_22696 0 0 1 1 105922623 105922643 mRNA hsa-miR-371-5p CXorf57 miRanda miRanda
14034 chrX 105922626 105922626 1 + C T rs7881828 105922611 + 105922591 105922631 41 TGTGTGTAAATGTTAACTAAACAGTGGATTCCTCTCGTGTT TGTGTGTAAATGTTAACTAAACAGTGGATTCCTCTTGTGTT < 41bp 1 0.577868233878988 1 0.173663794994354 experiment 0.844263532242025 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 36 CXorf57 ENSG00000147231 UTR3 Human protein_coding chrX:105922611 chrX:105922626 . . 0 hm6A_associated_SNPs_22697 0 0 1 1 105922623 105922643 mRNA hsa-miR-371-5p CXorf57 miRanda miRanda
14034 chrX 107171442 107171442 1 + A C rs755236763 107171447 + 107171427 107171467 41 TACTTGCTTTTTCAGATAAAACACTTCTGAAGTGCTCAAGA TACTTGCTTTTTCAGCTAAAACACTTCTGAAGTGCTCAAGA < 41bp 1 0.551517421904648 1 0.0041058361530304 experiment 0.896965156190705 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 LOC101928335 ENSG00000236064 ncRNA_intronic Human antisense chrX:107171447 chrX:107171442 . . 0 hm6A_associated_SNPs_22703 0 0 0 1 107171441 107171466 mRNA hsa-miR-96 MID2 miRanda miRanda
14034 chrX 107174749 107174749 1 + T C rs3813784 107174759 + 107174739 107174779 41 CAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTG CAATAGTGTCCCTCCTAGTGACAGAAATATGAGCATCTGTG < 41bp 1 0.693970439895453 1 0.0634167194366455 experiment 0.612059120209094 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 11 LOC101928335 ENSG00000236064 ncRNA_intronic Human antisense chrX:107174759 chrX:107174749 . . 0 hm6A_associated_SNPs_22706 0 0 0 1 107174733 107174754 mRNA hsa-miR-185 MID2 miRanda miRanda
14034 chrX 109416722 109416722 1 + C T rs200859909 109416726 + 109416706 109416746 41 CCCTGAGGAAGCAAGTCGTGACTTGACTTGGAGAACACCCA CCCTGAGGAAGCAAGTTGTGACTTGACTTGGAGAACACCCA < 41bp 1 0.733718668242305 1 0.890076994895935 experiment 0.53256266351539 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 17 TMEM164 ENSG00000157600 UTR3 Human protein_coding chrX:109416726 chrX:109416722 . . 0 hm6A_associated_SNPs_22708 0 0 1 1 109416709 109416730 mRNA hsa-miR-224 TMEM164 miRanda miRanda
14034 chrX 109416723 109416723 1 + G A rs184994773 109416726 + 109416706 109416746 41 CCCTGAGGAAGCAAGTCGTGACTTGACTTGGAGAACACCCA CCCTGAGGAAGCAAGTCATGACTTGACTTGGAGAACACCCA < 41bp 1 0.740402920852745 1 0.88617080450058 experiment 0.51919415829451 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 TMEM164 ENSG00000157600 UTR3 Human protein_coding chrX:109416726 chrX:109416723 . . 0 hm6A_associated_SNPs_22709 0 0 1 1 109416709 109416730 mRNA hsa-miR-224 TMEM164 miRanda miRanda
14034 chrX 110931860 110931860 1 + G A rs530094379 110931847 + 110931827 110931867 41 TAATCGTGCCTAATGTCAAAACTTTACTGGTTTGAGAAGAA TAATCGTGCCTAATGTCAAAACTTTACTGGTTTAAGAAGAA < 41bp 1 0.198412465624461 1 0.422441035509109 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 ALG13 ENSG00000101901 UTR3 Human protein_coding chrX:110931847 chrX:110931860 . . 0 hm6A_associated_SNPs_22711 0 0 1 1 110931843 110931863 mRNA hsa-miR-371-5p ALG13 miRanda miRanda
14034 chrX 110931860 110931860 1 + G A rs530094379 110931880 + 110931860 110931900 41 GAGAAGAATAATCAAAAAGGACTTATACCAATAGGACTTAC AAGAAGAATAATCAAAAAGGACTTATACCAATAGGACTTAC < 41bp 1 0.578943087297946 1 0.951101303100586 experiment 0.842113825404108 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 ALG13 ENSG00000101901 UTR3 Human protein_coding chrX:110931880 chrX:110931860 . . 0 hm6A_associated_SNPs_22712 0 0 1 1 110931843 110931863 mRNA hsa-miR-371-5p ALG13 miRanda miRanda
14034 chrX 118377753 118377753 1 + G T rs774728252 118377740 + 118377720 118377760 41 TAACAAAATGAAATCTCAAAACAGAGCTCAGCTGCAAAAAA TAACAAAATGAAATCTCAAAACAGAGCTCAGCTTCAAAAAA < 41bp 1 0.744024074877797 1 0.824548721313477 experiment 0.511951850244406 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 PGRMC1 ENSG00000101856 UTR3 Human protein_coding chrX:118377740 chrX:118377753 . . 0 hm6A_associated_SNPs_22721 0 0 1 1 118377741 118377760 mRNA hsa-miR-129-5p PGRMC1 miRanda miRanda
14034 chrX 118587003 118587003 1 + C A rs3810755 118587001 + 118586981 118587021 41 AAGTTCTTCAAAACGAGAAAACCGAAGCCTAAAAAACCAAC AAGTTCTTCAAAACGAGAAAACAGAAGCCTAAAAAACCAAC < 41bp 1 0.787639547462001 1 0.826940059661865 experiment 0.424720905075998 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587001 chrX:118587003 nonsynonymous SNV 0.986 0 hm6A_associated_SNPs_22722 0 0 0 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chrX 118587003 118587003 1 + C A rs3810755 118587016 + 118586996 118587036 41 AGAAAACCGAAGCCTAAAAAACCAACTCTATAAAATGGAAT AGAAAACAGAAGCCTAAAAAACCAACTCTATAAAATGGAAT < 41bp 1 0.70507523130064 1 0.940624117851257 experiment 0.589849537398721 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587016 chrX:118587003 nonsynonymous SNV 0.986 0 hm6A_associated_SNPs_22723 0 0 0 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chrX 118587004 118587004 1 + G A rs147613758 118587001 + 118586981 118587021 41 AAGTTCTTCAAAACGAGAAAACCGAAGCCTAAAAAACCAAC AAGTTCTTCAAAACGAGAAAACCAAAGCCTAAAAAACCAAC < 41bp 1 0.660069777877389 1 0.816309094429016 experiment 0.679860444245223 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587001 chrX:118587004 synonymous SNV . 0 hm6A_associated_SNPs_22724 0 0 0 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chrX 118587004 118587004 1 + G A rs147613758 118587016 + 118586996 118587036 41 AGAAAACCGAAGCCTAAAAAACCAACTCTATAAAATGGAAT AGAAAACCAAAGCCTAAAAAACCAACTCTATAAAATGGAAT < 41bp 1 0.672455219075791 1 0.944829821586609 experiment 0.655089561848418 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587016 chrX:118587004 synonymous SNV . 0 hm6A_associated_SNPs_22725 0 0 0 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chrX 128724902 128724902 1 + A G rs767451928 128724915 + 128724895 128724935 41 AGATCACATTTAGTAGCATAACTGTAGGGACTATTAGAGAT AGATCACGTTTAGTAGCATAACTGTAGGGACTATTAGAGAT < 41bp 1 0.489590460281815 1 0.0562642514705658 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 OCRL ENSG00000122126 UTR3 Human protein_coding chrX:128724915 chrX:128724902 . . 0 hm6A_associated_SNPs_22743 0 0 1 1 128724901 128724922 mRNA hsa-miR-139-5p OCRL miRanda miRanda
14034 chrX 128724907 128724907 1 + G A rs185555041 128724915 + 128724895 128724935 41 AGATCACATTTAGTAGCATAACTGTAGGGACTATTAGAGAT AGATCACATTTAATAGCATAACTGTAGGGACTATTAGAGAT < 41bp 1 0.507291882469259 1 0.0567532181739807 experiment 0.985416235061481 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 OCRL ENSG00000122126 UTR3 Human protein_coding chrX:128724915 chrX:128724907 . . 0 hm6A_associated_SNPs_22744 0 0 1 1 128724901 128724922 mRNA hsa-miR-139-5p OCRL miRanda miRanda
14034 chrX 129506993 129506993 1 + T C rs185255936 129507002 + 129506982 129507022 41 CCGTGTTCTAATGTATTTTGACAATGTTGTAAGTGTTTACC CCGTGTTCTAACGTATTTTGACAATGTTGTAAGTGTTTACC < 41bp 1 0.621767257640544 1 0.149412125349045 experiment 0.756465484718912 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 12 SLC25A14 ENSG00000102078 UTR3 Human protein_coding chrX:129507002 chrX:129506993 . . 0 hm6A_associated_SNPs_22753 0 0 1 1 129506989 129507010 mRNA hsa-miR-543 SLC25A14 miRanda miRanda
14034 chrX 135128970 135128970 1 + C G rs143940685 135128989 + 135128969 135129009 41 CCTATGAAACACCTGAATGAACTTTGATGAAGTACAGTCTG CGTATGAAACACCTGAATGAACTTTGATGAAGTACAGTCTG < 41bp 1 0.787206056557464 1 0.995090901851654 experiment 0.425587886885071 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 SLC9A6 ENSG00000198689 UTR3 Human protein_coding chrX:135128989 chrX:135128970 . . 0 hm6A_associated_SNPs_22764 0 0 1 1 135128965 135128984 mRNA hsa-miR-125a-3p SLC9A6 miRanda miRanda
14034 chrX 135594364 135594364 1 + A G rs190032998 135594383 + 135594363 135594403 41 CATAGTTACAATGCAAGTAAACTGGATACTTGTTCTTTTGT CGTAGTTACAATGCAAGTAAACTGGATACTTGTTCTTTTGT < 41bp 1 0.364640178332995 1 0.97458028793335 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 HTATSF1 ENSG00000102241 UTR3 Human protein_coding chrX:135594383 chrX:135594364 . . 0 hm6A_associated_SNPs_22772 0 0 1 3 135594355 135594378 mRNA hsa-miR-33a HTATSF1 miRanda miRanda
14034 chrX 135594364 135594364 1 + A G rs190032998 135594383 + 135594363 135594403 41 CATAGTTACAATGCAAGTAAACTGGATACTTGTTCTTTTGT CGTAGTTACAATGCAAGTAAACTGGATACTTGTTCTTTTGT < 41bp 1 0.364640178332995 1 0.97458028793335 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 HTATSF1 ENSG00000102241 UTR3 Human protein_coding chrX:135594383 chrX:135594364 . . 0 hm6A_associated_SNPs_22772 0 0 1 3 135594344 135594366 mRNA hsa-miR-425 HTATSF1 miRanda miRanda
14034 chrX 135594364 135594364 1 + A G rs190032998 135594383 + 135594363 135594403 41 CATAGTTACAATGCAAGTAAACTGGATACTTGTTCTTTTGT CGTAGTTACAATGCAAGTAAACTGGATACTTGTTCTTTTGT < 41bp 1 0.364640178332995 1 0.97458028793335 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 HTATSF1 ENSG00000102241 UTR3 Human protein_coding chrX:135594383 chrX:135594364 . . 0 hm6A_associated_SNPs_22772 0 0 1 3 135594356 135594378 mRNA hsa-miR-33b HTATSF1 miRanda miRanda
14034 chrX 147031446 147031446 1 + A G rs782208456 147031444 + 147031424 147031464 41 ACAGGTACTTTGTCTAAGAAACATTGGAAGCAGGTTAAATG ACAGGTACTTTGTCTAAGAAACGTTGGAAGCAGGTTAAATG Direct Loss 1 0.646523985153253 1 0.776903748512268 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 FMR1 ENSG00000102081 UTR3 Human protein_coding chrX:147031444 chrX:147031446 . . 0 hm6A_associated_SNPs_22775 0 0 1 1 147031439 147031460 mRNA hsa-miR-490-3p FMR1 miRanda miRanda
14034 chrX 147031533 147031533 1 + A C rs182251747 147031530 + 147031510 147031550 41 GAAAAGACTAAGATCGGTTAACAAATAACAACTTTTTTTTC GAAAAGACTAAGATCGGTTAACACATAACAACTTTTTTTTC < 41bp 1 0.413596933555187 1 0.370310068130493 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 FMR1 ENSG00000102081 UTR3 Human protein_coding chrX:147031530 chrX:147031533 . . 0 hm6A_associated_SNPs_22776 0 0 1 1 147031523 147031544 mRNA hsa-miR-382 FMR1 miRanda miRanda
14034 chrX 147031538 147031538 1 + C G rs25704 147031530 + 147031510 147031550 41 GAAAAGACTAAGATCGGTTAACAAATAACAACTTTTTTTTC GAAAAGACTAAGATCGGTTAACAAATAAGAACTTTTTTTTC < 41bp 1 0.507154786023813 1 0.703357696533203 experiment 0.985690427952375 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 FMR1 ENSG00000102081 UTR3 Human protein_coding chrX:147031530 chrX:147031538 . . 0 hm6A_associated_SNPs_22777 0 0 1 1 147031523 147031544 mRNA hsa-miR-382 FMR1 miRanda miRanda
14034 chrX 149809795 149809795 1 + C T rs367912069 149809800 + 149809780 149809820 41 TAAGTGCTATGAGCTCTGTGACACTTACCCTGCTCTTTTGG TAAGTGCTATGAGCTTTGTGACACTTACCCTGCTCTTTTGG < 41bp 1 0.530669688588603 1 0.86818528175354 experiment 0.938660622822795 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149809800 chrX:149809795 synonymous SNV . 0 hm6A_associated_SNPs_22779 1 0 0 1 149809785 149809808 mRNA hsa-miR-142-3p MTM1 miRanda miRanda
14034 chrX 153009662 153009662 1 + C T rs782343473 153009671 + 153009651 153009691 41 CATAAAAGCCGCCCAGTGGGACCCACAGTCACACAGAGCGC CATAAAAGCCGTCCAGTGGGACCCACAGTCACACAGAGCGC < 41bp 1 0.364265334434929 1 0.97084653377533 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 12 ABCD1 ENSG00000232725 ncRNA_intronic Human antisense chrX:153009671 chrX:153009662 . . 0 hm6A_associated_SNPs_22802 1 0 0 1 153009662 153009683 mRNA hsa-miR-134 ABCD1 miRanda miRanda
14034 chrX 153630255 153630255 1 - G C rs12877 153630240 - 153630220 153630260 41 AAGAACAGAGGTCAGGAAAAACACTGGCTGGGACGCTAGAA AAGAAGAGAGGTCAGGAAAAACACTGGCTGGGACGCTAGAA < 41bp 1 0.633276386753164 1 0.218002736568451 experiment 0.733447226493672 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 DNASE1L1;RPL10 ENSG00000013563;ENSG00000147403 UTR3 Human other chrX:153630240 chrX:153630255 . . 0 hm6A_associated_SNPs_22813 0 0 0 2 153630233 153630256 mRNA hsa-miR-199a-5p DNASE1L1 miRanda miRanda
14034 chrX 153630255 153630255 1 - G C rs12877 153630240 - 153630220 153630260 41 AAGAACAGAGGTCAGGAAAAACACTGGCTGGGACGCTAGAA AAGAAGAGAGGTCAGGAAAAACACTGGCTGGGACGCTAGAA < 41bp 1 0.633276386753164 1 0.218002736568451 experiment 0.733447226493672 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 DNASE1L1;RPL10 ENSG00000013563;ENSG00000147403 UTR3 Human other chrX:153630240 chrX:153630255 . . 0 hm6A_associated_SNPs_22813 0 0 0 2 153630233 153630256 mRNA hsa-miR-199b-5p DNASE1L1 miRanda miRanda
14034 chrX 153630255 153630255 1 - G C rs12877 153630256 - 153630236 153630276 41 TCCATCCTCCTCTCCAAAGAACAGAGGTCAGGAAAAACACT TCCATCCTCCTCTCCAAAGAAGAGAGGTCAGGAAAAACACT Direct Loss 1 0.79181135894538 1 0.0398203730583191 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 DNASE1L1;RPL10 ENSG00000013563;ENSG00000147403 UTR3 Human other chrX:153630256 chrX:153630255 . . 0 hm6A_associated_SNPs_22814 0 0 0 2 153630233 153630256 mRNA hsa-miR-199a-5p DNASE1L1 miRanda miRanda
14034 chrX 153630255 153630255 1 - G C rs12877 153630256 - 153630236 153630276 41 TCCATCCTCCTCTCCAAAGAACAGAGGTCAGGAAAAACACT TCCATCCTCCTCTCCAAAGAAGAGAGGTCAGGAAAAACACT Direct Loss 1 0.79181135894538 1 0.0398203730583191 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 DNASE1L1;RPL10 ENSG00000013563;ENSG00000147403 UTR3 Human other chrX:153630256 chrX:153630255 . . 0 hm6A_associated_SNPs_22814 0 0 0 2 153630233 153630256 mRNA hsa-miR-199b-5p DNASE1L1 miRanda miRanda
14034 chrX 155172020 155172020 1 + C G rs181348609 155172011 + 155171991 155172031 41 TTCAAGAGACAGTATTGCTAACATCTCATCTTAATGTCTTT TTCAAGAGACAGTATTGCTAACATCTCATGTTAATGTCTTT < 41bp 1 0.786861264747413 1 0.175599873065948 experiment 0.426277470505174 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 VAMP7 ENSG00000124333 UTR3 Human protein_coding chrX:155172011 chrX:155172020 . . 0 hm6A_associated_SNPs_22828 0 0 1 1 155172015 155172036 mRNA hsa-miR-495 VAMP7 miRanda miRanda
14034 chr13 20625654 20625654 1 + G A ACC 20625644 + 20625624 20625664 41 CAGTGGCGTGGGGAAATGAAACATTTCTGTGATCAACATTG CAGTGGCGTGGGGAAATGAAACATTTCTGTAATCAACATTG < 41bp 1 0.652308380370097 1 0.829126060009003 experiment 0.695383239259806 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20625644 chr13:20625654 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_22842 0 0 1 1 20625647 20625671 mRNA hsa-miR-454 ZMYM2 miRanda miRanda
14034 chr12 98940166 98940166 1 + A G ACC 98940149 + 98940129 98940169 41 CTTATTAGGTGGGAGAAAAAACAGAGGAAAGAAGAGTAGAA CTTATTAGGTGGGAGAAAAAACAGAGGAAAGAAGAGTGGAA < 41bp 1 0.527058407529121 1 0.024418830871582 experiment 0.945883184941758 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 38 TMPO ENSG00000120802 CDS Human protein_coding chr12:98940149 chr12:98940166 synonymous SNV . 0 hm6A_associated_SNPs_22853 0 0 1 2 98940154 98940175 mRNA hsa-miR-204 TMPO miRanda miRanda
14034 chr12 98940166 98940166 1 + A G ACC 98940149 + 98940129 98940169 41 CTTATTAGGTGGGAGAAAAAACAGAGGAAAGAAGAGTAGAA CTTATTAGGTGGGAGAAAAAACAGAGGAAAGAAGAGTGGAA < 41bp 1 0.527058407529121 1 0.024418830871582 experiment 0.945883184941758 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 38 TMPO ENSG00000120802 CDS Human protein_coding chr12:98940149 chr12:98940166 synonymous SNV . 0 hm6A_associated_SNPs_22853 0 0 1 2 98940155 98940175 mRNA hsa-miR-211 TMPO miRanda miRanda
14034 chr12 28605587 28605587 1 + G C ACC 28605569 + 28605549 28605589 41 ATTCAAAAAGCTATACAAGAACAAAGAAAAATAAGTCAGGT ATTCAAAAAGCTATACAAGAACAAAGAAAAATAAGTCACGT < 41bp 1 0.364814103407353 1 0.892542898654938 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28605569 chr12:28605587 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_22877 0 0 1 2 28605586 28605587 mRNA hsa-miR-22 CCDC91 miRanda miRanda
14034 chr12 28605587 28605587 1 + G C ACC 28605569 + 28605549 28605589 41 ATTCAAAAAGCTATACAAGAACAAAGAAAAATAAGTCAGGT ATTCAAAAAGCTATACAAGAACAAAGAAAAATAAGTCACGT < 41bp 1 0.364814103407353 1 0.892542898654938 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 39 CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28605569 chr12:28605587 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_22877 0 0 1 2 28605587 28605587 mRNA hsa-miR-137 CCDC91 miRanda miRanda
14034 chr2 152320981 152320981 1 + G T ACC 152321000 + 152320980 152321020 41 TGTGTGAGGAAAAAAATGAAACTAGCAAATATGCAGAATAT TTTGTGAGGAAAAAAATGAAACTAGCAAATATGCAGAATAT < 41bp 1 0.775738301442085 1 0.865570068359375 experiment 0.448523397115829 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152321000 chr2:152320981 synonymous SNV . 0 hm6A_associated_SNPs_22881 0 0 1 1 152320966 152320988 mRNA hsa-miR-342-3p RIF1 miRanda miRanda
14034 chr1 150444740 150444740 1 + G A ACC 150444737 + 150444717 150444757 41 TGTCAGGGGAGCCGATCCAGACCGTAGAGTCCATCCGAGTT TGTCAGGGGAGCCGATCCAGACCATAGAGTCCATCCGAGTT < 41bp 1 0.70236591314823 1 0.944468915462494 experiment 0.595268173703541 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150444737 chr1:150444740 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_22888 0 0 1 1 150444739 150444762 mRNA hsa-miR-873 RPRD2 miRanda miRanda
14034 chr16 31121421 31121421 1 + C A ACC 31121435 + 31121415 31121455 41 TGCCTTCCAGAAGCTGACAGACTTCCCTCCGGTGAGTGCTG TGCCTTACAGAAGCTGACAGACTTCCCTCCGGTGAGTGCTG < 41bp 1 0.326591442544525 1 0.910944581031799 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121435 chr16:31121421 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_22911 0 0 1 2 31121403 31121421 mRNA hsa-miR-124 BCKDK miRanda miRanda
14034 chr16 31121421 31121421 1 + C A ACC 31121435 + 31121415 31121455 41 TGCCTTCCAGAAGCTGACAGACTTCCCTCCGGTGAGTGCTG TGCCTTACAGAAGCTGACAGACTTCCCTCCGGTGAGTGCTG < 41bp 1 0.326591442544525 1 0.910944581031799 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121435 chr16:31121421 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_22911 0 0 1 2 31121400 31121421 mRNA hsa-miR-506 BCKDK miRanda miRanda
14034 chr16 89611117 89611117 1 + C T ACC 89611107 + 89611087 89611127 41 GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTGA GGCGTCCACGAACCGAGCTGACATTTTGGATGGTGCTCTGA < 41bp 1 0.76149220760713 1 0.805752873420715 experiment 0.477015584785739 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 SPG7 ENSG00000197912 CDS Human protein_coding chr16:89611107 chr16:89611117 synonymous SNV . 0 hm6A_associated_SNPs_22936 0 0 1 2 89611110 89611131 mRNA hsa-miR-376a SPG7 miRanda miRanda
14034 chr16 89611117 89611117 1 + C T ACC 89611107 + 89611087 89611127 41 GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTGA GGCGTCCACGAACCGAGCTGACATTTTGGATGGTGCTCTGA < 41bp 1 0.76149220760713 1 0.805752873420715 experiment 0.477015584785739 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 SPG7 ENSG00000197912 CDS Human protein_coding chr16:89611107 chr16:89611117 synonymous SNV . 0 hm6A_associated_SNPs_22936 0 0 1 2 89611109 89611131 mRNA hsa-miR-376b SPG7 miRanda miRanda
14034 chr20 29625956 29625956 1 + G A ACC 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGGACCAAAAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.634913793379774 1 0.805184006690979 experiment 0.730172413240451 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 17 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625956 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_23000 0 0 0 2 29625935 29625956 mRNA hsa-miR-133a FRG1B miRanda miRanda
14034 chr20 29625956 29625956 1 + G A ACC 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGGACCAAAAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.634913793379774 1 0.805184006690979 experiment 0.730172413240451 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 17 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625956 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_23000 0 0 0 2 29625935 29625956 mRNA hsa-miR-133b FRG1B miRanda miRanda
14034 chr6 151293139 151293139 1 + T C ACC 151293120 + 151293100 151293140 41 GCATGCGGGCCCTTTTGCTAACATTGCTCACGGCAACTCTT GCATGCGGGCCCTTTTGCTAACATTGCTCACGGCAACTCCT < 41bp 1 0.563525520896184 1 0.0863797962665558 experiment 0.872948958207632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151293120 chr6:151293139 synonymous SNV . 0 hm6A_associated_SNPs_23003 0 0 1 2 151293127 151293148 mRNA hsa-miR-141 MTHFD1L miRanda miRanda
14034 chr6 151293139 151293139 1 + T C ACC 151293120 + 151293100 151293140 41 GCATGCGGGCCCTTTTGCTAACATTGCTCACGGCAACTCTT GCATGCGGGCCCTTTTGCTAACATTGCTCACGGCAACTCCT < 41bp 1 0.563525520896184 1 0.0863797962665558 experiment 0.872948958207632 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151293120 chr6:151293139 synonymous SNV . 0 hm6A_associated_SNPs_23003 0 0 1 2 151293127 151293148 mRNA hsa-miR-200a MTHFD1L miRanda miRanda
14034 chr2 173431637 173431637 1 + G A BLCA 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCAAACTAGAACTTGAAGAACTAAA < 41bp 1 0.194715683008694 1 0.738495945930481 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431637 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_23145 0 0 1 3 173431630 173431651 mRNA hsa-miR-26a PDK1 miRanda miRanda
14034 chr2 173431637 173431637 1 + G A BLCA 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCAAACTAGAACTTGAAGAACTAAA < 41bp 1 0.194715683008694 1 0.738495945930481 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431637 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_23145 0 0 1 3 173431628 173431651 mRNA hsa-miR-26b PDK1 miRanda miRanda
14034 chr2 173431637 173431637 1 + G A BLCA 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCAAACTAGAACTTGAAGAACTAAA < 41bp 1 0.194715683008694 1 0.738495945930481 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431637 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_23145 0 0 1 3 173431635 173431651 mRNA hsa-miR-1297 PDK1 miRanda miRanda
14034 chr14 54997667 54997667 1 + G T BLCA 54997683 + 54997663 54997703 41 AAGAGATACTAAAATTGAAGACTTTGGTACAGTACCCAGAT AAGATATACTAAAATTGAAGACTTTGGTACAGTACCCAGAT < 41bp 1 0.49726268875955 1 0.979191422462463 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:54997683 chr14:54997667 nonsynonymous SNV 0.848 1 hm6A_associated_SNPs_23218 0 0 1 2 54997660 54997679 mRNA hsa-miR-590-3p CGRRF1 miRanda miRanda
14034 chr14 54997667 54997667 1 + G T BLCA 54997683 + 54997663 54997703 41 AAGAGATACTAAAATTGAAGACTTTGGTACAGTACCCAGAT AAGATATACTAAAATTGAAGACTTTGGTACAGTACCCAGAT < 41bp 1 0.49726268875955 1 0.979191422462463 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:54997683 chr14:54997667 nonsynonymous SNV 0.848 1 hm6A_associated_SNPs_23218 0 0 1 2 54997644 54997671 mRNA hsa-miR-216b CGRRF1 miRanda miRanda
14034 chr15 25227202 25227202 1 + G T BLCA 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AAAATTTGAGCTTAAAAATTACACTCTGAAATCCAGTCAGT Direct Loss 1 0.202221174061335 1 0.136205166578293 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227202 . . 0 hm6A_associated_SNPs_23229 0 0 1 2 25227198 25227217 mRNA hsa-miR-876-5p PAR-SN miRanda miRanda
14034 chr15 25227202 25227202 1 + G T BLCA 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AAAATTTGAGCTTAAAAATTACACTCTGAAATCCAGTCAGT Direct Loss 1 0.202221174061335 1 0.136205166578293 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227202 . . 0 hm6A_associated_SNPs_23229 0 0 1 2 25227198 25227217 mRNA hsa-miR-876-5p SNRPN miRanda miRanda
14034 chr10 38654432 38654432 1 + A G BLCA 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTCGCAGTGCAAGG < 41bp 1 0.329693415324685 1 0.954282522201538 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 34 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654432 . . 0 hm6A_associated_SNPs_23262 0 0 1 2 38654417 38654437 mRNA hsa-miR-33a HSD17B7P2 miRanda miRanda
14034 chr10 38654432 38654432 1 + A G BLCA 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTCGCAGTGCAAGG < 41bp 1 0.329693415324685 1 0.954282522201538 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 34 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654432 . . 0 hm6A_associated_SNPs_23262 0 0 1 2 38654418 38654437 mRNA hsa-miR-33b HSD17B7P2 miRanda miRanda
14034 chr20 44521121 44521121 1 + G C BLCA 44521116 + 44521096 44521136 41 CAAGTTTTATGCAACTAATGACACTGAGGTGAGTCTGGTGC CAAGTTTTATGCAACTAATGACACTCAGGTGAGTCTGGTGC < 41bp 1 0.598469073146834 1 0.131405681371689 experiment 0.803061853706333 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 26 CTSA ENSG00000064601 CDS Human protein_coding chr20:44521116 chr20:44521121 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_23281 0 0 1 2 44521108 44521123 mRNA hsa-miR-330-5p CTSA miRanda miRanda
14034 chr20 44521121 44521121 1 + G C BLCA 44521116 + 44521096 44521136 41 CAAGTTTTATGCAACTAATGACACTGAGGTGAGTCTGGTGC CAAGTTTTATGCAACTAATGACACTCAGGTGAGTCTGGTGC < 41bp 1 0.598469073146834 1 0.131405681371689 experiment 0.803061853706333 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 26 CTSA ENSG00000064601 CDS Human protein_coding chr20:44521116 chr20:44521121 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_23281 0 0 1 2 44521115 44521123 mRNA hsa-miR-326 CTSA miRanda miRanda
14034 chr17 61499280 61499280 1 + C G BLCA 61499269 + 61499249 61499289 41 GAGACTCTCGGCAAGGGCAGACATCCCCTATCAAACCAAAG GAGACTCTCGGCAAGGGCAGACATCCCCTATGAAACCAAAG < 41bp 1 0.774996875953366 1 0.986631870269775 experiment 0.450006248093269 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 TANC2 ENSG00000170921 CDS Human protein_coding chr17:61499269 chr17:61499280 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23328 0 0 0 1 61499268 61499290 mRNA hsa-miR-9 TANC2 miRanda miRanda
14034 chr17 61499280 61499280 1 + C G BLCA 61499283 + 61499263 61499303 41 GGGCAGACATCCCCTATCAAACCAAAGAGACCGTTCGTGGA GGGCAGACATCCCCTATGAAACCAAAGAGACCGTTCGTGGA < 41bp 1 0.590046141419738 1 0.980650782585144 experiment 0.819907717160524 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 TANC2 ENSG00000170921 CDS Human protein_coding chr17:61499283 chr17:61499280 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23329 0 0 0 1 61499268 61499290 mRNA hsa-miR-9 TANC2 miRanda miRanda
14034 chr17 62532807 62532807 1 + G T BLCA 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGCGAGATTAACAAAGGAGACGCCACCAGGA < 41bp 1 0.626164666723953 1 0.953558683395386 experiment 0.747670666552095 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532807 stopgain 0.412 1 hm6A_associated_SNPs_23337 0 0 1 2 62532796 62532819 mRNA hsa-miR-204 CCDC45 miRanda miRanda
14034 chr17 62532807 62532807 1 + G T BLCA 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGCGAGATTAACAAAGGAGACGCCACCAGGA < 41bp 1 0.626164666723953 1 0.953558683395386 experiment 0.747670666552095 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532807 stopgain 0.412 1 hm6A_associated_SNPs_23337 0 0 1 2 62532798 62532819 mRNA hsa-miR-211 CCDC45 miRanda miRanda
14034 chr22 46725395 46725395 1 + G C BLCA 46725408 + 46725388 46725428 41 GGCCTCTGATCGACCTCATGACAAACACTCCAGACATGAAT GGCCTCTCATCGACCTCATGACAAACACTCCAGACATGAAT < 41bp 1 0.710630052335343 1 0.984002113342285 experiment 0.578739895329314 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46725408 chr22:46725395 synonymous SNV . 0 hm6A_associated_SNPs_23349 0 0 1 1 46725377 46725399 mRNA hsa-miR-383 GTSE1 miRanda miRanda
14034 chr11 65272561 65272561 1 + C T BLCA 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTTAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0600104794834957 1 0.596049606800079 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272561 . . 0 hm6A_associated_SNPs_23352 0 0 1 7 65272547 65272568 lncRNA hsa-miR-320a MALAT1 miRanda starBase2
14034 chr11 65272561 65272561 1 + C T BLCA 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTTAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0600104794834957 1 0.596049606800079 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272561 . . 0 hm6A_associated_SNPs_23352 0 0 1 7 65272547 65272568 lncRNA hsa-miR-320b MALAT1 miRanda starBase2
14034 chr11 65272561 65272561 1 + C T BLCA 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTTAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0600104794834957 1 0.596049606800079 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272561 . . 0 hm6A_associated_SNPs_23352 0 0 1 7 65272549 65272568 lncRNA hsa-miR-320c MALAT1 miRanda starBase2
14034 chr11 65272561 65272561 1 + C T BLCA 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTTAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0600104794834957 1 0.596049606800079 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272561 . . 0 hm6A_associated_SNPs_23352 0 0 1 7 65272550 65272568 lncRNA hsa-miR-320d MALAT1 miRanda starBase2
14034 chr11 65272561 65272561 1 + C T BLCA 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTTAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0600104794834957 1 0.596049606800079 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272561 . . 0 hm6A_associated_SNPs_23352 0 0 1 7 65272549 65272568 lncRNA hsa-miR-4429 MALAT1 miRanda starBase2
14034 chr11 65272561 65272561 1 + C T BLCA 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTTAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0600104794834957 1 0.596049606800079 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272561 . . 0 hm6A_associated_SNPs_23352 0 0 1 7 65272551 65272575 lncRNA hsa-miR-338-3p MALAT1 miRanda starBase2
14034 chr11 65272561 65272561 1 + C T BLCA 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTTAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0600104794834957 1 0.596049606800079 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272561 . . 0 hm6A_associated_SNPs_23352 0 0 1 7 65272547 65272569 lncRNA hsa-miR-9-3p MALAT1 miRanda starBase2
14034 chr17 27185487 27185487 1 + G T BLCA 27185500 + 27185480 27185520 41 CCCTAGTGTCCTGGTCATGAACAAGGTGAGCACTACCCACC CCCTAGTTTCCTGGTCATGAACAAGGTGAGCACTACCCACC < 41bp 1 0.675228006083757 1 0.650913894176483 experiment 0.649543987832487 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 8 ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27185500 chr17:27185487 nonsynonymous SNV 0.926 1 hm6A_associated_SNPs_23354 0 0 1 1 27185473 27185493 mRNA hsa-miR-873 ERAL1 miRanda miRanda
14034 chrX 41205790 41205790 1 + G A BLCA 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTCAAATGTAAAACATGTTATCAATTTTGACTT < 41bp 1 0.644400430020632 1 0.978560924530029 experiment 0.711199139958736 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 18 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205790 synonymous SNV . 0 hm6A_associated_SNPs_23385 0 0 1 2 41205772 41205792 mRNA hsa-miR-23a DDX3X miRanda miRanda
14034 chrX 41205790 41205790 1 + G A BLCA 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTCAAATGTAAAACATGTTATCAATTTTGACTT < 41bp 1 0.644400430020632 1 0.978560924530029 experiment 0.711199139958736 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 18 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205790 synonymous SNV . 0 hm6A_associated_SNPs_23385 0 0 1 2 41205772 41205792 mRNA hsa-miR-23b DDX3X miRanda miRanda
14034 chr8 25364307 25364307 1 + G A BLCA 25364308 + 25364288 25364328 41 TGAACCAAAAGCTGGAACTGACAGTCCTGTTTCTTGTGCTT TGAACCAAAAGCTGGAACTAACAGTCCTGTTTCTTGTGCTT < 41bp 1 0.746971403628053 1 0.943421959877014 experiment 0.506057192743894 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364308 chr8:25364307 nonsynonymous SNV 0.015 0 hm6A_associated_SNPs_23397 0 0 1 1 25364289 25364310 mRNA hsa-miR-223 CDCA2 miRanda miRanda
14034 chr17 61628110 61628110 1 + G C BLCA 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTACGCGATGAACTGCAGTGTGCGGCCCGATA < 41bp 1 0.561401836261954 1 0.997935831546783 experiment 0.877196327476091 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628110 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23398 0 0 1 2 61628088 61628112 mRNA hsa-miR-145 DCAF7 miRanda miRanda
14034 chr17 61628110 61628110 1 + G C BLCA 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTACGCGATGAACTGCAGTGTGCGGCCCGATA < 41bp 1 0.561401836261954 1 0.997935831546783 experiment 0.877196327476091 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628110 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23398 0 0 1 2 61628090 61628113 mRNA hsa-miR-136 DCAF7 miRanda miRanda
14034 chr22 45241152 45241152 1 + C G BLCA 45241157 + 45241137 45241177 41 CTGTTTTCTCAGCCTCAAAGACAAAAATCAAGGCGAACTCA CTGTTTTCTCAGCCTGAAAGACAAAAATCAAGGCGAACTCA < 41bp 1 0.356309494842039 1 0.55597448348999 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45241157 chr22:45241152 synonymous SNV . 0 hm6A_associated_SNPs_23431 0 0 0 1 45241149 45241153 mRNA hsa-miR-202 ARHGAP8 miRanda miRanda
14034 chr2 71654463 71654463 1 + G C BLCA 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAAAAGACAAAACTTCAATCCTTGTCCCAAGT < 41bp 1 0.687579716772342 1 0.991625189781189 experiment 0.624840566455316 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654463 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_23466 0 0 1 3 71654444 71654465 mRNA hsa-miR-26a ZNF638 miRanda miRanda
14034 chr2 71654463 71654463 1 + G C BLCA 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAAAAGACAAAACTTCAATCCTTGTCCCAAGT < 41bp 1 0.687579716772342 1 0.991625189781189 experiment 0.624840566455316 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654463 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_23466 0 0 1 3 71654445 71654465 mRNA hsa-miR-26b ZNF638 miRanda miRanda
14034 chr2 71654463 71654463 1 + G C BLCA 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAAAAGACAAAACTTCAATCCTTGTCCCAAGT < 41bp 1 0.687579716772342 1 0.991625189781189 experiment 0.624840566455316 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654463 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_23466 0 0 1 3 71654449 71654465 mRNA hsa-miR-1297 ZNF638 miRanda miRanda
14034 chr4 115544433 115544433 1 + G T BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTTACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.388224535714702 1 0.979738414287567 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544433 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23468 0 0 0 7 115544423 115544444 mRNA hsa-miR-15a UGT8 miRanda miRanda
14034 chr4 115544433 115544433 1 + G T BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTTACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.388224535714702 1 0.979738414287567 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544433 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23468 0 0 0 7 115544422 115544444 mRNA hsa-miR-16 UGT8 miRanda miRanda
14034 chr4 115544433 115544433 1 + G T BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTTACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.388224535714702 1 0.979738414287567 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544433 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23468 0 0 0 7 115544422 115544442 mRNA hsa-miR-214 UGT8 miRanda miRanda
14034 chr4 115544433 115544433 1 + G T BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTTACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.388224535714702 1 0.979738414287567 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544433 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23468 0 0 0 7 115544423 115544444 mRNA hsa-miR-15b UGT8 miRanda miRanda
14034 chr4 115544433 115544433 1 + G T BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTTACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.388224535714702 1 0.979738414287567 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544433 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23468 0 0 0 7 115544423 115544444 mRNA hsa-miR-195 UGT8 miRanda miRanda
14034 chr4 115544433 115544433 1 + G T BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTTACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.388224535714702 1 0.979738414287567 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544433 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23468 0 0 0 7 115544423 115544444 mRNA hsa-miR-424 UGT8 miRanda miRanda
14034 chr4 115544433 115544433 1 + G T BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTTACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.388224535714702 1 0.979738414287567 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544433 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23468 0 0 0 7 115544424 115544444 mRNA hsa-miR-497 UGT8 miRanda miRanda
14034 chr7 6777178 6777178 1 + C T BLCA 6777163 + 6777143 6777183 41 GGGCTCGCAGGAACATGTGGACTCTCAGGAGAAAGCGCCTG GGGCTCGCAGGAACATGTGGACTCTCAGGAGAAAGTGCCTG < 41bp 1 0.659196361905642 1 0.998767971992493 experiment 0.681607276188716 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 36 PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6777163 chr7:6777178 . . 0 hm6A_associated_SNPs_23472 0 0 1 1 6777171 6777192 mRNA hsa-miR-223 PMS2CL miRanda miRanda
14034 chr14 95078751 95078751 1 + G A BLCA 95078738 + 95078718 95078758 41 ATGAAAATCCACTACTCCAGACAGACGGCTTTGGAATCCAC ATGAAAATCCACTACTCCAGACAGACGGCTTTGAAATCCAC < 41bp 1 0.105118737996318 1 0.0537412464618683 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 34 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95078738 chr14:95078751 nonsynonymous SNV . 0 hm6A_associated_SNPs_23487 0 0 1 1 95078739 95078763 mRNA hsa-miR-138 SERPINA3 miRanda miRanda
14034 chr6 161530934 161530934 1 + C A BLCA 161530938 + 161530918 161530958 41 GCATGGCATAGTCCACCGTGACATTAAAGGTAATCCCACAC GCATGGCATAGTCCACAGTGACATTAAAGGTAATCCCACAC < 41bp 1 0.263669576397859 1 0.831373453140259 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530938 chr6:161530934 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_23494 0 0 1 3 161530932 161530946 mRNA hsa-miR-96 MAP3K4 miRanda miRanda
14034 chr6 161530934 161530934 1 + C A BLCA 161530938 + 161530918 161530958 41 GCATGGCATAGTCCACCGTGACATTAAAGGTAATCCCACAC GCATGGCATAGTCCACAGTGACATTAAAGGTAATCCCACAC < 41bp 1 0.263669576397859 1 0.831373453140259 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530938 chr6:161530934 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_23494 0 0 1 3 161530930 161530946 mRNA hsa-miR-367 MAP3K4 miRanda miRanda
14034 chr6 161530934 161530934 1 + C A BLCA 161530938 + 161530918 161530958 41 GCATGGCATAGTCCACCGTGACATTAAAGGTAATCCCACAC GCATGGCATAGTCCACAGTGACATTAAAGGTAATCCCACAC < 41bp 1 0.263669576397859 1 0.831373453140259 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530938 chr6:161530934 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_23494 0 0 1 3 161530932 161530946 mRNA hsa-miR-1271 MAP3K4 miRanda miRanda
14034 chr10 79795399 79795399 1 + G T BLCA 79795383 + 79795363 79795403 41 TCTTTGTATTTGGATTCAGAACTCATTTTGGTGGTGGCAAG TCTTTGTATTTGGATTCAGAACTCATTTTGGTGGTGTCAAG < 41bp 1 0.288701514637854 1 0.985253572463989 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 37 RPS24 ENSG00000138326 CDS Human protein_coding chr10:79795383 chr10:79795399 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23500 0 0 0 2 79795387 79795412 mRNA hsa-miR-199b-5p RPS24 miRanda miRanda
14034 chr10 79795399 79795399 1 + G T BLCA 79795383 + 79795363 79795403 41 TCTTTGTATTTGGATTCAGAACTCATTTTGGTGGTGGCAAG TCTTTGTATTTGGATTCAGAACTCATTTTGGTGGTGTCAAG < 41bp 1 0.288701514637854 1 0.985253572463989 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 37 RPS24 ENSG00000138326 CDS Human protein_coding chr10:79795383 chr10:79795399 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23500 0 0 0 2 79795387 79795406 mRNA hsa-miR-431 RPS24 miRanda miRanda
14034 chrX 153664175 153664175 1 + A C BLCA 153664178 + 153664158 153664198 41 ACATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGAC ACATGATCCTCAGCCTCCAGACCATGGATCGCTTTGATGAC < 41bp 1 0.636634590413479 1 0.950026094913483 experiment 0.726730819173043 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 18 ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153664178 chrX:153664175 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_23503 0 0 1 1 153664154 153664175 mRNA hsa-miR-485-5p ATP6AP1 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675774 54675793 mRNA hsa-miR-23a MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675759 54675780 mRNA hsa-miR-25 MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675760 54675780 mRNA hsa-miR-32 MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675759 54675780 mRNA hsa-miR-92a MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675774 54675793 mRNA hsa-miR-23b MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675759 54675781 mRNA hsa-miR-137 MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675759 54675780 mRNA hsa-miR-363 MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675759 54675780 mRNA hsa-miR-367 MRPL37 miRanda miRanda
14034 chr1 54675780 54675780 1 + A G BLCA 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TGTTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.633786462204716 1 0.768872261047363 experiment 0.732427075590569 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675780 nonsynonymous SNV 0.071 0 hm6A_associated_SNPs_23506 0 0 1 9 54675759 54675780 mRNA hsa-miR-92b MRPL37 miRanda miRanda
14034 chr7 104742552 104742552 1 + G A BLCA 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAAAAACTGAAACTGCACTAGCAGAA < 41bp 1 0.380428460405265 1 0.996430158615112 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742552 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23543 0 0 1 5 104742548 104742569 mRNA hsa-miR-130a MLL5 miRanda miRanda
14034 chr7 104742552 104742552 1 + G A BLCA 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAAAAACTGAAACTGCACTAGCAGAA < 41bp 1 0.380428460405265 1 0.996430158615112 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742552 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23543 0 0 1 5 104742547 104742569 mRNA hsa-miR-301a MLL5 miRanda miRanda
14034 chr7 104742552 104742552 1 + G A BLCA 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAAAAACTGAAACTGCACTAGCAGAA < 41bp 1 0.380428460405265 1 0.996430158615112 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742552 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23543 0 0 1 5 104742548 104742569 mRNA hsa-miR-130b MLL5 miRanda miRanda
14034 chr7 104742552 104742552 1 + G A BLCA 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAAAAACTGAAACTGCACTAGCAGAA < 41bp 1 0.380428460405265 1 0.996430158615112 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742552 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23543 0 0 1 5 104742547 104742569 mRNA hsa-miR-454 MLL5 miRanda miRanda
14034 chr7 104742552 104742552 1 + G A BLCA 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAAAAACTGAAACTGCACTAGCAGAA < 41bp 1 0.380428460405265 1 0.996430158615112 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742552 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23543 0 0 1 5 104742547 104742569 mRNA hsa-miR-301b MLL5 miRanda miRanda
14034 chr7 140404733 140404733 1 + G C BLCA 140404730 + 140404710 140404750 41 TATCCCTCCTGATGATGAAGACTGAAGGTGTAGACTCAGCC TATCCCTCCTGATGATGAAGACTCAAGGTGTAGACTCAGCC < 41bp 1 0.592418586924118 1 0.819059014320374 experiment 0.815162826151764 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140404730 chr7:140404733 stoploss 0.552 0 hm6A_associated_SNPs_23552 0 0 1 1 140404732 140404753 mRNA hsa-miR-485-5p NDUFB2 miRanda miRanda
14034 chr2 65309759 65309759 1 + C G BLCA 65309742 + 65309722 65309762 41 CCACGCAGATCGCCTGTATGACTCTATCTTGGCCTCTCTGG CCACGCAGATCGCCTGTATGACTCTATCTTGGCCTCTGTGG < 41bp 1 0.299033993591636 1 0.936663150787354 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 CEP68 ENSG00000011523 CDS Human protein_coding chr2:65309742 chr2:65309759 nonsynonymous SNV 0.734 0 hm6A_associated_SNPs_23596 0 0 1 1 65309748 65309772 mRNA hsa-miR-338-3p CEP68 miRanda miRanda
14034 chr20 36488327 36488327 1 + C T BLCA 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATTGACAATGACACCGAGGAGGAGTTCTACC < 41bp 1 0.645329183629972 1 0.784617304801941 experiment 0.709341632740055 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488327 synonymous SNV . 0 hm6A_associated_SNPs_23604 0 0 1 1 36488309 36488330 mRNA hsa-miR-433 CTNNBL1 miRanda miRanda
14034 chr1 82456494 82456494 1 + G C BLCA 82456491 + 82456471 82456511 41 AGAAAGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAA AGAAAGTGAAGTCCGAGGGAACTCACAGCTATGTCTCCCAA < 41bp 1 0.489024305121747 1 0.998803615570068 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456491 chr1:82456494 nonsynonymous SNV 0.930 1 hm6A_associated_SNPs_23614 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr1 82456494 82456494 1 + G C BLCA 82456495 + 82456475 82456515 41 AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA AGTGAAGTCCGAGGGAACTCACAGCTATGTCTCCCAACTGA Direct Loss 1 0.73022207643541 1 0.999280095100403 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456495 chr1:82456494 nonsynonymous SNV 0.930 1 hm6A_associated_SNPs_23615 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr11 65269080 65269080 1 + G A BLCA 65269081 + 65269061 65269101 41 CAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGA CAGATGCTATAGTACTATTAACAAACTGGGTTAGAGAAGGA < 41bp 1 0.181947488588783 1 0.836271643638611 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269081 chr11:65269080 . . 0 hm6A_associated_SNPs_23623 0 0 1 1 65269079 65269100 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr11 65269080 65269080 1 + G A BLCA 65269085 + 65269065 65269105 41 TGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGT TGCTATAGTACTATTAACAAACTGGGTTAGAGAAGGAGTGT < 41bp 1 0.0807022516724482 1 0.849552512168884 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269085 chr11:65269080 . . 0 hm6A_associated_SNPs_23624 0 0 1 1 65269079 65269100 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr10 115663332 115663332 1 + G A BLCA 115663314 + 115663294 115663334 41 TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGGAA TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGAAA < 41bp 1 0.176748418398528 1 0.95336127281189 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115663314 chr10:115663332 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23641 0 0 1 3 115663318 115663340 mRNA hsa-miR-145 NHLRC2 miRanda miRanda
14034 chr10 115663332 115663332 1 + G A BLCA 115663314 + 115663294 115663334 41 TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGGAA TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGAAA < 41bp 1 0.176748418398528 1 0.95336127281189 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115663314 chr10:115663332 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23641 0 0 1 3 115663312 115663333 mRNA hsa-miR-370 NHLRC2 miRanda miRanda
14034 chr10 115663332 115663332 1 + G A BLCA 115663314 + 115663294 115663334 41 TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGGAA TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGAAA < 41bp 1 0.176748418398528 1 0.95336127281189 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115663314 chr10:115663332 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23641 0 0 1 3 115663325 115663347 mRNA hsa-miR-599 NHLRC2 miRanda miRanda
14034 chr4 74280809 74280809 1 + A T BLCA 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCTGCTGAGTCTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.408834440780556 1 0.0333541631698608 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280809 nonsynonymous SNV 0.785 4 hm6A_associated_SNPs_23686 0 0 1 2 74280794 74280818 mRNA hsa-miR-182 ALB miRanda miRanda
14034 chr4 74280809 74280809 1 + A T BLCA 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCTGCTGAGTCTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.408834440780556 1 0.0333541631698608 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280809 nonsynonymous SNV 0.785 4 hm6A_associated_SNPs_23686 0 0 1 2 74280801 74280821 mRNA hsa-miR-431 ALB miRanda miRanda
14034 chr4 74280809 74280809 1 + A T BLCA 74280828 + 74280808 74280848 41 GACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGT GTCTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGT < 41bp 1 0.0697615809073894 1 0.0120778381824493 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 2 ALB ENSG00000163631 CDS Human protein_coding chr4:74280828 chr4:74280809 nonsynonymous SNV 0.785 4 hm6A_associated_SNPs_23687 0 0 1 2 74280794 74280818 mRNA hsa-miR-182 ALB miRanda miRanda
14034 chr4 74280809 74280809 1 + A T BLCA 74280828 + 74280808 74280848 41 GACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGT GTCTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGT < 41bp 1 0.0697615809073894 1 0.0120778381824493 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 2 ALB ENSG00000163631 CDS Human protein_coding chr4:74280828 chr4:74280809 nonsynonymous SNV 0.785 4 hm6A_associated_SNPs_23687 0 0 1 2 74280801 74280821 mRNA hsa-miR-431 ALB miRanda miRanda
14034 chr17 30510207 30510207 1 + G A BLCA 30510212 + 30510192 30510232 41 TTCAGCGAAAAACCTGAAGAACATATCAGAGCTCTTTTATT TTCAGCGAAAAACCTAAAGAACATATCAGAGCTCTTTTATT < 41bp 1 0.686783473905327 1 0.861634314060211 experiment 0.626433052189347 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30510212 chr17:30510207 synonymous SNV . 0 hm6A_associated_SNPs_23722 0 0 1 2 30510198 30510219 mRNA hsa-miR-190 RHOT1 miRanda miRanda
14034 chr17 30510207 30510207 1 + G A BLCA 30510212 + 30510192 30510232 41 TTCAGCGAAAAACCTGAAGAACATATCAGAGCTCTTTTATT TTCAGCGAAAAACCTAAAGAACATATCAGAGCTCTTTTATT < 41bp 1 0.686783473905327 1 0.861634314060211 experiment 0.626433052189347 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30510212 chr17:30510207 synonymous SNV . 0 hm6A_associated_SNPs_23722 0 0 1 2 30510199 30510219 mRNA hsa-miR-190b RHOT1 miRanda miRanda
14034 chr17 29061941 29061941 1 + T C BLCA 29061944 + 29061924 29061964 41 AGATCTATAGATTTCTTTGAACTCGGAATCTCATAGCAGTA AGATCTATAGATTTCTTCGAACTCGGAATCTCATAGCAGTA < 41bp 1 0.0854814947653301 1 0.779096484184265 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29061944 chr17:29061941 . . 0 hm6A_associated_SNPs_23732 0 0 1 1 29061930 29061951 mRNA hsa-miR-145 SUZ12P miRanda miRanda
14034 chr16 30007659 30007659 1 + G C BLCA 30007660 + 30007640 30007680 41 GCCGGCGGACGGCGAAGTGGACTACAAAAAAAAATACCGGA GCCGGCGGACGGCGAAGTGCACTACAAAAAAAAATACCGGA Direct Loss 1 0.462033380128517 1 0.993321061134338 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 INO80E ENSG00000169592 CDS Human protein_coding chr16:30007660 chr16:30007659 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23734 0 0 1 1 30007652 30007670 mRNA hsa-miR-129-5p INO80E miRanda miRanda
14034 chr8 48309060 48309060 1 + G C BLCA 48309061 + 48309041 48309081 41 CAGTTTGCATCGGATGCAAGACAGATTATGGAGAGACTGAT CAGTTTGCATCGGATGCAACACAGATTATGGAGAGACTGAT Direct Loss 1 0.284832761587681 1 0.993300199508667 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48309061 chr8:48309060 nonsynonymous SNV 0.002 0 hm6A_associated_SNPs_23763 0 0 1 1 48309046 48309063 mRNA hsa-miR-431 KIAA0146 miRanda miRanda
14034 chr8 48309060 48309060 1 + G C BLCA 48309076 + 48309056 48309096 41 GCAAGACAGATTATGGAGAGACTGATAGATCCAAGGACAAA GCAACACAGATTATGGAGAGACTGATAGATCCAAGGACAAA < 41bp 1 0.166047725678945 1 0.99807596206665 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48309076 chr8:48309060 nonsynonymous SNV 0.002 0 hm6A_associated_SNPs_23764 0 0 1 1 48309046 48309063 mRNA hsa-miR-431 KIAA0146 miRanda miRanda
14034 chr3 160119741 160119741 1 + G A BLCA 160119751 + 160119731 160119771 41 AAGTTTAGAAGAGATTTTGAACAGCATTCCTCCTCCCCCGC AAGTTTAGAAAAGATTTTGAACAGCATTCCTCCTCCCCCGC < 41bp 1 0.462958997913265 1 0.723285555839539 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160119751 chr3:160119741 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_23768 0 0 1 1 160119725 160119747 mRNA hsa-miR-216b SMC4 miRanda miRanda
14034 chr20 35929739 35929739 1 + G A BLCA 35929741 + 35929721 35929761 41 GAGAACCTGCTACGGTACGGACTCTTCCTGGGAGCCATCTT GAGAACCTGCTACGGTACAGACTCTTCCTGGGAGCCATCTT < 41bp 1 0.44416015237964 1 0.814920246601105 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 MANBAL ENSG00000101363 CDS Human protein_coding chr20:35929741 chr20:35929739 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_23772 0 0 1 1 35929720 35929740 mRNA hsa-miR-126 MANBAL miRanda miRanda
14034 chr11 65272556 65272556 1 + G C BLCA 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTGAATACATTT < 41bp 1 0.13279520789226 1 0.866282761096954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272556 . . 0 hm6A_associated_SNPs_23817 0 0 1 7 65272547 65272568 lncRNA hsa-miR-320a MALAT1 miRanda starBase2
14034 chr11 65272556 65272556 1 + G C BLCA 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTGAATACATTT < 41bp 1 0.13279520789226 1 0.866282761096954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272556 . . 0 hm6A_associated_SNPs_23817 0 0 1 7 65272547 65272568 lncRNA hsa-miR-320b MALAT1 miRanda starBase2
14034 chr11 65272556 65272556 1 + G C BLCA 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTGAATACATTT < 41bp 1 0.13279520789226 1 0.866282761096954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272556 . . 0 hm6A_associated_SNPs_23817 0 0 1 7 65272549 65272568 lncRNA hsa-miR-320c MALAT1 miRanda starBase2
14034 chr11 65272556 65272556 1 + G C BLCA 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTGAATACATTT < 41bp 1 0.13279520789226 1 0.866282761096954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272556 . . 0 hm6A_associated_SNPs_23817 0 0 1 7 65272550 65272568 lncRNA hsa-miR-320d MALAT1 miRanda starBase2
14034 chr11 65272556 65272556 1 + G C BLCA 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTGAATACATTT < 41bp 1 0.13279520789226 1 0.866282761096954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272556 . . 0 hm6A_associated_SNPs_23817 0 0 1 7 65272549 65272568 lncRNA hsa-miR-4429 MALAT1 miRanda starBase2
14034 chr11 65272556 65272556 1 + G C BLCA 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTGAATACATTT < 41bp 1 0.13279520789226 1 0.866282761096954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272556 . . 0 hm6A_associated_SNPs_23817 0 0 1 7 65272551 65272575 lncRNA hsa-miR-338-3p MALAT1 miRanda starBase2
14034 chr11 65272556 65272556 1 + G C BLCA 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTGAATACATTT < 41bp 1 0.13279520789226 1 0.866282761096954 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272556 . . 0 hm6A_associated_SNPs_23817 0 0 1 7 65272547 65272569 lncRNA hsa-miR-9-3p MALAT1 miRanda starBase2
14034 chr17 76203000 76203000 1 + G A BLCA 76203004 + 76202984 76203024 41 TGTTCCAGATTATCTTGAAAACAATCTTCCAGTAGTTCTGA TGTTCCAGATTATCTTAAAAACAATCTTCCAGTAGTTCTGA < 41bp 1 0.765959746004046 1 0.278037220239639 experiment 0.468080507991909 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 17 AFMID ENSG00000183077 CDS Human protein_coding chr17:76203004 chr17:76203000 nonsynonymous SNV 0.948 0 hm6A_associated_SNPs_23851 0 0 1 2 76202992 76203002 mRNA hsa-miR-26a AFMID miRanda miRanda
14034 chr17 76203000 76203000 1 + G A BLCA 76203004 + 76202984 76203024 41 TGTTCCAGATTATCTTGAAAACAATCTTCCAGTAGTTCTGA TGTTCCAGATTATCTTAAAAACAATCTTCCAGTAGTTCTGA < 41bp 1 0.765959746004046 1 0.278037220239639 experiment 0.468080507991909 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 17 AFMID ENSG00000183077 CDS Human protein_coding chr17:76203004 chr17:76203000 nonsynonymous SNV 0.948 0 hm6A_associated_SNPs_23851 0 0 1 2 76202992 76203002 mRNA hsa-miR-26b AFMID miRanda miRanda
14034 chr20 29625941 29625941 1 + A T BLCA 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GTTGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.627551187576587 1 0.549657046794891 experiment 0.744897624846827 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 2 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625941 nonsynonymous SNV 0.849 3 hm6A_associated_SNPs_23916 0 0 1 2 29625935 29625956 mRNA hsa-miR-133a FRG1B miRanda miRanda
14034 chr20 29625941 29625941 1 + A T BLCA 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GTTGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.627551187576587 1 0.549657046794891 experiment 0.744897624846827 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 2 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625941 nonsynonymous SNV 0.849 3 hm6A_associated_SNPs_23916 0 0 1 2 29625935 29625956 mRNA hsa-miR-133b FRG1B miRanda miRanda
14034 chr1 233807173 233807173 1 + C T BLCA 233807182 + 233807162 233807202 41 GTCCTTCTCCTCGATCACAGACCAGGCAGCTGGCATGAAAG GTCCTTCTCCTTGATCACAGACCAGGCAGCTGGCATGAAAG < 41bp 1 0.730470596317326 1 0.905557990074158 experiment 0.539058807365348 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807182 chr1:233807173 nonsynonymous SNV 0.993 2 hm6A_associated_SNPs_23920 0 0 1 1 233807172 233807193 mRNA hsa-miR-22 KCNK1 miRanda miRanda
14034 chr11 46749600 46749600 1 + C T BLCA 46749608 + 46749588 46749628 41 TGGGGCCAGCCTCATCAGTGACCGCTGGGTCCTCACCGCCG TGGGGCCAGCCTTATCAGTGACCGCTGGGTCCTCACCGCCG < 41bp 1 0.0917984839701379 1 0.703606307506561 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 F2 ENSG00000180210 CDS Human protein_coding chr11:46749608 chr11:46749600 synonymous SNV . 0 hm6A_associated_SNPs_23943 0 0 1 1 46749580 46749601 mRNA hsa-miR-485-5p F2 miRanda miRanda
14034 chr7 56142308 56142308 1 + G A BLCA 56142311 + 56142291 56142331 41 GGCTCTGGCATCCGAGAGAGACTGGAGCACCCAGTGTTACA GGCTCTGGCATCCGAGAAAGACTGGAGCACCCAGTGTTACA < 41bp 1 0.215221892752326 1 0.848726987838745 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56142311 chr7:56142308 synonymous SNV . 0 hm6A_associated_SNPs_23946 0 0 1 2 56142308 56142329 mRNA hsa-miR-141 SUMF2 miRanda miRanda
14034 chr7 56142308 56142308 1 + G A BLCA 56142311 + 56142291 56142331 41 GGCTCTGGCATCCGAGAGAGACTGGAGCACCCAGTGTTACA GGCTCTGGCATCCGAGAAAGACTGGAGCACCCAGTGTTACA < 41bp 1 0.215221892752326 1 0.848726987838745 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56142311 chr7:56142308 synonymous SNV . 0 hm6A_associated_SNPs_23946 0 0 1 2 56142308 56142329 mRNA hsa-miR-200a SUMF2 miRanda miRanda
14034 chr5 138665072 138665072 1 + G C BLCA 138665066 + 138665046 138665086 41 AAATTGGCAGAAGAACGCAGACAGAAGAAGGAAACTTAAGA AAATTGGCAGAAGAACGCAGACAGAACAAGGAAACTTAAGA < 41bp 1 0.646073597423844 1 0.582420647144318 experiment 0.707852805152312 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 MATR3 ENSG00000015479 CDS Human protein_coding chr5:138665066 chr5:138665072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23973 0 0 1 2 138665068 138665095 mRNA hsa-miR-363 MATR3 miRanda miRanda
14034 chr5 138665072 138665072 1 + G C BLCA 138665066 + 138665046 138665086 41 AAATTGGCAGAAGAACGCAGACAGAAGAAGGAAACTTAAGA AAATTGGCAGAAGAACGCAGACAGAACAAGGAAACTTAAGA < 41bp 1 0.646073597423844 1 0.582420647144318 experiment 0.707852805152312 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 MATR3 ENSG00000015479 CDS Human protein_coding chr5:138665066 chr5:138665072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23973 0 0 1 2 138665072 138665095 mRNA hsa-miR-367 MATR3 miRanda miRanda
14034 chr5 138665072 138665072 1 + G C BLCA 138665079 + 138665059 138665099 41 AACGCAGACAGAAGAAGGAAACTTAAGATGTGCAAGGAGAT AACGCAGACAGAACAAGGAAACTTAAGATGTGCAAGGAGAT < 41bp 1 0.637475960796558 1 0.455420464277267 experiment 0.725048078406885 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 MATR3 ENSG00000015479 CDS Human protein_coding chr5:138665079 chr5:138665072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23974 0 0 1 2 138665068 138665095 mRNA hsa-miR-363 MATR3 miRanda miRanda
14034 chr5 138665072 138665072 1 + G C BLCA 138665079 + 138665059 138665099 41 AACGCAGACAGAAGAAGGAAACTTAAGATGTGCAAGGAGAT AACGCAGACAGAACAAGGAAACTTAAGATGTGCAAGGAGAT < 41bp 1 0.637475960796558 1 0.455420464277267 experiment 0.725048078406885 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 MATR3 ENSG00000015479 CDS Human protein_coding chr5:138665079 chr5:138665072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23974 0 0 1 2 138665072 138665095 mRNA hsa-miR-367 MATR3 miRanda miRanda
14034 chr10 131964842 131964842 1 + G A BLCA 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG AATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG < 41bp 1 0.604941528053204 1 0.924744725227356 experiment 0.790116943893592 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964842 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_23975 0 0 1 1 131964840 131964862 mRNA hsa-miR-339-5p GLRX3 miRanda miRanda
14034 chr11 65270172 65270172 1 + G A BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAAAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.208797667689621 1 0.90792179107666 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270172 . . 0 hm6A_associated_SNPs_23982 0 0 1 3 65270164 65270185 lncRNA hsa-miR-28-5p MALAT1 miRanda starBase2
14034 chr11 65270172 65270172 1 + G A BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAAAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.208797667689621 1 0.90792179107666 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270172 . . 0 hm6A_associated_SNPs_23982 0 0 1 3 65270163 65270185 lncRNA hsa-miR-3139 MALAT1 miRanda starBase2
14034 chr11 65270172 65270172 1 + G A BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAAAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.208797667689621 1 0.90792179107666 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270172 . . 0 hm6A_associated_SNPs_23982 0 0 1 3 65270163 65270185 lncRNA hsa-miR-708-5p MALAT1 miRanda starBase2
14034 chr7 73107716 73107716 1 + G T BLCA 73107717 + 73107697 73107737 41 CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAG CTCCGGTGGCATGGTGGTATACTACCCTAACAGTGCCAAAG Direct Loss 1 0.178523797458296 1 0.0535789430141449 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107717 chr7:73107716 nonsynonymous SNV 0.939 4 hm6A_associated_SNPs_23986 0 0 1 3 73107714 73107736 mRNA hsa-miR-96 WBSCR22 miRanda miRanda
14034 chr7 73107716 73107716 1 + G T BLCA 73107717 + 73107697 73107737 41 CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAG CTCCGGTGGCATGGTGGTATACTACCCTAACAGTGCCAAAG Direct Loss 1 0.178523797458296 1 0.0535789430141449 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107717 chr7:73107716 nonsynonymous SNV 0.939 4 hm6A_associated_SNPs_23986 0 0 1 3 73107697 73107718 mRNA hsa-miR-197 WBSCR22 miRanda miRanda
14034 chr7 73107716 73107716 1 + G T BLCA 73107717 + 73107697 73107737 41 CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAG CTCCGGTGGCATGGTGGTATACTACCCTAACAGTGCCAAAG Direct Loss 1 0.178523797458296 1 0.0535789430141449 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107717 chr7:73107716 nonsynonymous SNV 0.939 4 hm6A_associated_SNPs_23986 0 0 1 3 73107715 73107736 mRNA hsa-miR-1271 WBSCR22 miRanda miRanda
14034 chr7 73107716 73107716 1 + G T BLCA 73107726 + 73107706 73107746 41 CATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT CATGGTGGTATACTACCCTAACAGTGCCAAAGCAAAGAAGT < 41bp 1 0.511530430026511 1 0.0973177552223206 experiment 0.976939139946977 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107726 chr7:73107716 nonsynonymous SNV 0.939 4 hm6A_associated_SNPs_23987 0 0 1 3 73107714 73107736 mRNA hsa-miR-96 WBSCR22 miRanda miRanda
14034 chr7 73107716 73107716 1 + G T BLCA 73107726 + 73107706 73107746 41 CATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT CATGGTGGTATACTACCCTAACAGTGCCAAAGCAAAGAAGT < 41bp 1 0.511530430026511 1 0.0973177552223206 experiment 0.976939139946977 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107726 chr7:73107716 nonsynonymous SNV 0.939 4 hm6A_associated_SNPs_23987 0 0 1 3 73107697 73107718 mRNA hsa-miR-197 WBSCR22 miRanda miRanda
14034 chr7 73107716 73107716 1 + G T BLCA 73107726 + 73107706 73107746 41 CATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT CATGGTGGTATACTACCCTAACAGTGCCAAAGCAAAGAAGT < 41bp 1 0.511530430026511 1 0.0973177552223206 experiment 0.976939139946977 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107726 chr7:73107716 nonsynonymous SNV 0.939 4 hm6A_associated_SNPs_23987 0 0 1 3 73107715 73107736 mRNA hsa-miR-1271 WBSCR22 miRanda miRanda
14034 chr15 65849119 65849119 1 + C T BLCA 65849108 + 65849088 65849128 41 ACTGACCCAGAGGCAGGTAAACATTACAGTACAGAAGAAAG ACTGACCCAGAGGCAGGTAAACATTACAGTATAGAAGAAAG < 41bp 1 0.514044270346772 1 0.572763621807098 experiment 0.971911459306456 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65849108 chr15:65849119 stopgain 0.933 0 hm6A_associated_SNPs_24041 0 0 1 1 65849102 65849123 mRNA hsa-miR-486-5p PTPLAD1 miRanda miRanda
14034 chr11 86017314 86017314 1 + G A BLCA 86017333 + 86017313 86017353 41 AGAGGATAAATTTGTTTTTGACTTACCTGATTATGAAAGTA AAAGGATAAATTTGTTTTTGACTTACCTGATTATGAAAGTA < 41bp 1 0.337977477290155 1 0.180607676506042 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017333 chr11:86017314 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_24046 0 0 1 1 86017308 86017329 mRNA hsa-miR-495 C11orf73 miRanda miRanda
14034 chr5 74892752 74892752 1 + C G BLCA 74892735 + 74892715 74892755 41 AGCAAGTCTTTTAATATTGAACACTGTCATCAGAATTCTTC AGCAAGTCTTTTAATATTGAACACTGTCATCAGAATTGTTC < 41bp 1 0.749989255800132 1 0.974684476852417 experiment 0.500021488399737 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 POLK ENSG00000122008 CDS Human protein_coding chr5:74892735 chr5:74892752 nonsynonymous SNV 0.976 1 hm6A_associated_SNPs_24057 0 0 1 2 74892742 74892765 mRNA hsa-miR-376c POLK miRanda miRanda
14034 chr5 74892752 74892752 1 + C G BLCA 74892735 + 74892715 74892755 41 AGCAAGTCTTTTAATATTGAACACTGTCATCAGAATTCTTC AGCAAGTCTTTTAATATTGAACACTGTCATCAGAATTGTTC < 41bp 1 0.749989255800132 1 0.974684476852417 experiment 0.500021488399737 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 POLK ENSG00000122008 CDS Human protein_coding chr5:74892735 chr5:74892752 nonsynonymous SNV 0.976 1 hm6A_associated_SNPs_24057 0 0 1 2 74892746 74892768 mRNA hsa-miR-494 POLK miRanda miRanda
14034 chr20 29625947 29625947 1 + T C BLCA 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAACTGGACCAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.608018421247308 1 0.693316280841827 experiment 0.783963157505383 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625947 nonsynonymous SNV 0.920 1 hm6A_associated_SNPs_24118 0 0 1 2 29625935 29625956 mRNA hsa-miR-133a FRG1B miRanda miRanda
14034 chr20 29625947 29625947 1 + T C BLCA 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAACTGGACCAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.608018421247308 1 0.693316280841827 experiment 0.783963157505383 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625947 nonsynonymous SNV 0.920 1 hm6A_associated_SNPs_24118 0 0 1 2 29625935 29625956 mRNA hsa-miR-133b FRG1B miRanda miRanda
14034 chr4 74274473 74274473 1 + G A BLCA 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTAATGTGATGTG < 41bp 1 0.0811902372532257 1 0.827012777328491 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 31 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274473 nonsynonymous SNV 0.006 0 hm6A_associated_SNPs_24142 0 0 1 5 74274465 74274489 mRNA hsa-miR-148a ALB miRanda miRanda
14034 chr4 74274473 74274473 1 + G A BLCA 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTAATGTGATGTG < 41bp 1 0.0811902372532257 1 0.827012777328491 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 31 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274473 nonsynonymous SNV 0.006 0 hm6A_associated_SNPs_24142 0 0 1 5 74274469 74274489 mRNA hsa-miR-152 ALB miRanda miRanda
14034 chr4 74274473 74274473 1 + G A BLCA 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTAATGTGATGTG < 41bp 1 0.0811902372532257 1 0.827012777328491 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 31 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274473 nonsynonymous SNV 0.006 0 hm6A_associated_SNPs_24142 0 0 1 5 74274465 74274488 mRNA hsa-miR-301a ALB miRanda miRanda
14034 chr4 74274473 74274473 1 + G A BLCA 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTAATGTGATGTG < 41bp 1 0.0811902372532257 1 0.827012777328491 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 31 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274473 nonsynonymous SNV 0.006 0 hm6A_associated_SNPs_24142 0 0 1 5 74274465 74274489 mRNA hsa-miR-148b ALB miRanda miRanda
14034 chr4 74274473 74274473 1 + G A BLCA 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTAATGTGATGTG < 41bp 1 0.0811902372532257 1 0.827012777328491 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 31 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274473 nonsynonymous SNV 0.006 0 hm6A_associated_SNPs_24142 0 0 1 5 74274465 74274488 mRNA hsa-miR-301b ALB miRanda miRanda
14034 chr12 98925604 98925604 1 + G C BLCA 98925593 + 98925573 98925613 41 GAATGGAAGTAATGATTCTGACAGATACAGTGACAATGAAG GAATGGAAGTAATGATTCTGACAGATACAGTCACAATGAAG < 41bp 1 0.526402673079881 1 0.956169605255127 experiment 0.947194653840238 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925593 chr12:98925604 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_24169 0 0 1 2 98925589 98925610 mRNA hsa-miR-25 TMPO miRanda miRanda
14034 chr12 98925604 98925604 1 + G C BLCA 98925593 + 98925573 98925613 41 GAATGGAAGTAATGATTCTGACAGATACAGTGACAATGAAG GAATGGAAGTAATGATTCTGACAGATACAGTCACAATGAAG < 41bp 1 0.526402673079881 1 0.956169605255127 experiment 0.947194653840238 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925593 chr12:98925604 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_24169 0 0 1 2 98925588 98925610 mRNA hsa-miR-363 TMPO miRanda miRanda
14034 chr12 98925604 98925604 1 + G C BLCA 98925605 + 98925585 98925625 41 TGATTCTGACAGATACAGTGACAATGAAGAAGGTAAAATTT TGATTCTGACAGATACAGTCACAATGAAGAAGGTAAAATTT Direct Loss 1 0.638811670811599 1 0.968968629837036 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925605 chr12:98925604 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_24170 0 0 1 2 98925589 98925610 mRNA hsa-miR-25 TMPO miRanda miRanda
14034 chr12 98925604 98925604 1 + G C BLCA 98925605 + 98925585 98925625 41 TGATTCTGACAGATACAGTGACAATGAAGAAGGTAAAATTT TGATTCTGACAGATACAGTCACAATGAAGAAGGTAAAATTT Direct Loss 1 0.638811670811599 1 0.968968629837036 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925605 chr12:98925604 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_24170 0 0 1 2 98925588 98925610 mRNA hsa-miR-363 TMPO miRanda miRanda
14034 chr6 133138120 133138120 1 + G C BLCA 133138106 + 133138086 133138126 41 TTTCTCCCAATAGGTTGATGACAACAAGAAACTAGGAGAAT TTTCTCCCAATAGGTTGATGACAACAAGAAACTACGAGAAT < 41bp 1 0.738909623883628 1 0.296546757221222 experiment 0.522180752232744 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138106 chr6:133138120 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_24214 0 0 1 1 133138104 133138124 mRNA hsa-miR-384 SNORA33 miRanda miRanda
14034 chr6 133138120 133138120 1 + G C BLCA 133138116 + 133138096 133138136 41 TAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGCCT TAGGTTGATGACAACAAGAAACTACGAGAATGGGTAGGCCT < 41bp 1 0.502814748003206 1 0.358323097229004 experiment 0.994370503993588 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 25 RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138116 chr6:133138120 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_24215 0 0 1 1 133138104 133138124 mRNA hsa-miR-384 SNORA33 miRanda miRanda
14034 chr4 54310234 54310234 1 + G A BLCA 54310218 + 54310198 54310238 41 ATCTTTTTCTTCAACAGTGGACATTCCTCTGGTTATGATAG ATCTTTTTCTTCAACAGTGGACATTCCTCTGGTTATAATAG < 41bp 1 0.411233833507966 1 0.695310354232788 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 37 FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54310218 chr4:54310234 nonsynonymous SNV 0.988 4 hm6A_associated_SNPs_24222 0 0 1 1 54310226 54310250 mRNA hsa-miR-19a FIP1L1 miRanda miRanda
14034 chr6 4056646 4056646 1 + G C BLCA 4056627 + 4056607 4056647 41 ATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAGA ATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTACA < 41bp 1 0.616977745341937 1 0.198116838932037 experiment 0.766044509316126 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4056627 chr6:4056646 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_24233 0 0 1 1 4056627 4056650 mRNA hsa-miR-216b PRPF4B miRanda miRanda
14034 chr5 70892167 70892167 1 + G A BLCA 70892173 + 70892153 70892193 41 ATTGCCCAGAGAAAGAATTGACAATCTCATAGACCCAGGGT ATTGCCCAGAGAAAAAATTGACAATCTCATAGACCCAGGGT < 41bp 1 0.641987397721053 1 0.063150018453598 experiment 0.716025204557895 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70892173 chr5:70892167 nonsynonymous SNV 0.990 5 hm6A_associated_SNPs_24349 0 0 1 1 70892159 70892179 mRNA hsa-miR-219-5p MCCC2 miRanda miRanda
14034 chr12 88442152 88442152 1 + G A BLCA 88442172 + 88442152 88442192 41 GATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGA AATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGA < 41bp 1 0.661993708448331 1 0.0145677328109741 experiment 0.676012583103338 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88442172 chr12:88442152 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_24370 0 0 1 3 88442139 88442159 mRNA hsa-miR-219-5p C12orf29 miRanda miRanda
14034 chr12 88442152 88442152 1 + G A BLCA 88442172 + 88442152 88442192 41 GATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGA AATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGA < 41bp 1 0.661993708448331 1 0.0145677328109741 experiment 0.676012583103338 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88442172 chr12:88442152 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_24370 0 0 1 3 88442149 88442170 mRNA hsa-miR-495 C12orf29 miRanda miRanda
14034 chr12 88442152 88442152 1 + G A BLCA 88442172 + 88442152 88442192 41 GATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGA AATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGA < 41bp 1 0.661993708448331 1 0.0145677328109741 experiment 0.676012583103338 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88442172 chr12:88442152 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_24370 0 0 1 3 88442150 88442174 mRNA hsa-miR-505 C12orf29 miRanda miRanda
14034 chr5 134106669 134106669 1 + G A BLCA 134106658 + 134106638 134106678 41 GAAGAAAAAAGACAAAGATGACAAGGAGGATGAAAAAGAAA GAAGAAAAAAGACAAAGATGACAAGGAGGATAAAAAAGAAA < 41bp 1 0.712800851120406 1 0.016419529914856 experiment 0.574398297759187 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134106658 chr5:134106669 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_24412 0 0 1 1 134106668 134106689 mRNA hsa-miR-338-3p DDX46 miRanda miRanda
14034 chr1 40525085 40525085 1 + C T BLCA 40525095 + 40525075 40525115 41 GGCAGTATCTCATACCTCTGACATGCACCGTGGGTATGCAG GGCAGTATCTTATACCTCTGACATGCACCGTGGGTATGCAG < 41bp 1 0.758929748406328 1 0.0240820348262787 experiment 0.482140503187344 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525095 chr1:40525085 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_24423 0 0 1 2 40525065 40525086 mRNA hsa-miR-146a CAP1 miRanda miRanda
14034 chr1 40525085 40525085 1 + C T BLCA 40525095 + 40525075 40525115 41 GGCAGTATCTCATACCTCTGACATGCACCGTGGGTATGCAG GGCAGTATCTTATACCTCTGACATGCACCGTGGGTATGCAG < 41bp 1 0.758929748406328 1 0.0240820348262787 experiment 0.482140503187344 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525095 chr1:40525085 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_24423 0 0 1 2 40525074 40525093 mRNA hsa-miR-202 CAP1 miRanda miRanda
14034 chr20 43541315 43541315 1 + G C BLCA 43541325 + 43541305 43541345 41 GCGGGCACTGGACACAATGAACTTTGAGATGCTCAAAGGCC GCGGGCACTGCACACAATGAACTTTGAGATGCTCAAAGGCC < 41bp 1 0.574950862494655 1 0.893305718898773 experiment 0.850098275010689 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43541325 chr20:43541315 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_24433 0 0 1 1 43541302 43541322 mRNA hsa-miR-599 PABPC1L miRanda miRanda
14034 chr17 57270934 57270934 1 + G A BLCA 57270953 + 57270933 57270973 41 CGTTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC CATTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC < 41bp 1 0.130843025467581 1 0.317614018917084 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270953 chr17:57270934 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_24462 0 0 1 1 57270922 57270943 mRNA hsa-miR-383 PRR11 miRanda miRanda
14034 chr11 65272325 65272325 1 + G T BLCA 65272335 + 65272315 65272355 41 CGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCC CGAAGGGCCATAGAAGCCAGACCCAGTAAGAAAAAATAGCC < 41bp 1 0.0165050692674283 1 0.411126434803009 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272335 chr11:65272325 . . 0 hm6A_associated_SNPs_24500 0 0 1 3 65272306 65272325 lncRNA hsa-miR-328-3p MALAT1 miRanda starBase2
14034 chr11 65272325 65272325 1 + G T BLCA 65272335 + 65272315 65272355 41 CGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCC CGAAGGGCCATAGAAGCCAGACCCAGTAAGAAAAAATAGCC < 41bp 1 0.0165050692674283 1 0.411126434803009 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272335 chr11:65272325 . . 0 hm6A_associated_SNPs_24500 0 0 1 3 65272309 65272325 lncRNA hsa-miR-328-3p MALAT1 miRanda starBase2
14034 chr11 65272325 65272325 1 + G T BLCA 65272335 + 65272315 65272355 41 CGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCC CGAAGGGCCATAGAAGCCAGACCCAGTAAGAAAAAATAGCC < 41bp 1 0.0165050692674283 1 0.411126434803009 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272335 chr11:65272325 . . 0 hm6A_associated_SNPs_24500 0 0 1 3 65272309 65272331 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr11 65273350 65273350 1 + G T BLCA 65273336 + 65273316 65273356 41 ATGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATA ATGCTGGGTGGGAACATGTAACTTGTAGACTGGATAAGATA < 41bp 1 0.561469945298027 1 0.282861948013306 experiment 0.877060109403945 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273336 chr11:65273350 . . 0 hm6A_associated_SNPs_24509 0 0 1 3 65273341 65273365 lncRNA hsa-miR-105-5p MALAT1 miRanda starBase2
14034 chr11 65273350 65273350 1 + G T BLCA 65273336 + 65273316 65273356 41 ATGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATA ATGCTGGGTGGGAACATGTAACTTGTAGACTGGATAAGATA < 41bp 1 0.561469945298027 1 0.282861948013306 experiment 0.877060109403945 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273336 chr11:65273350 . . 0 hm6A_associated_SNPs_24509 0 0 1 3 65273345 65273365 lncRNA hsa-miR-7853-5p MALAT1 miRanda starBase2
14034 chr11 65273350 65273350 1 + G T BLCA 65273336 + 65273316 65273356 41 ATGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATA ATGCTGGGTGGGAACATGTAACTTGTAGACTGGATAAGATA < 41bp 1 0.561469945298027 1 0.282861948013306 experiment 0.877060109403945 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273336 chr11:65273350 . . 0 hm6A_associated_SNPs_24509 0 0 1 3 65273348 65273368 lncRNA hsa-miR-888-5p MALAT1 miRanda starBase2
14034 chr1 150461520 150461520 1 + C G BLCA 150461523 + 150461503 150461543 41 GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTCG GCCCTTGGAGACAGATTGTGACCTCAGATTTCTGACATTCG < 41bp 1 0.130256687500411 1 0.872700572013855 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 TARS2 ENSG00000143374 CDS Human protein_coding chr1:150461523 chr1:150461520 nonsynonymous SNV 0.971 0 hm6A_associated_SNPs_24602 0 0 1 3 150461507 150461528 mRNA hsa-miR-98 TARS2 miRanda miRanda
14034 chr1 150461520 150461520 1 + C G BLCA 150461523 + 150461503 150461543 41 GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTCG GCCCTTGGAGACAGATTGTGACCTCAGATTTCTGACATTCG < 41bp 1 0.130256687500411 1 0.872700572013855 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 TARS2 ENSG00000143374 CDS Human protein_coding chr1:150461523 chr1:150461520 nonsynonymous SNV 0.971 0 hm6A_associated_SNPs_24602 0 0 1 3 150461507 150461528 mRNA hsa-let-7g TARS2 miRanda miRanda
14034 chr1 150461520 150461520 1 + C G BLCA 150461523 + 150461503 150461543 41 GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTCG GCCCTTGGAGACAGATTGTGACCTCAGATTTCTGACATTCG < 41bp 1 0.130256687500411 1 0.872700572013855 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 TARS2 ENSG00000143374 CDS Human protein_coding chr1:150461523 chr1:150461520 nonsynonymous SNV 0.971 0 hm6A_associated_SNPs_24602 0 0 1 3 150461508 150461528 mRNA hsa-let-7i TARS2 miRanda miRanda
14034 chr10 89268224 89268224 1 + G C BLCA 89268215 + 89268195 89268235 41 ATCACGTGGAAGCCTTCAAAACTGGACCAGAAATGCAGAAC ATCACGTGGAAGCCTTCAAAACTGGACCACAAATGCAGAAC < 41bp 1 0.248860618422379 1 0.96036958694458 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89268215 chr10:89268224 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_24614 0 0 1 1 89268213 89268235 mRNA hsa-miR-544 MINPP1 miRanda miRanda
14034 chr11 65271807 65271807 1 + G C BLCA 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTACAGACTTCACAGACAATGCAGTTG < 41bp 1 0.311854689633409 1 0.439967393875122 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 31 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271807 . . 0 hm6A_associated_SNPs_24623 0 0 1 2 65271794 65271816 lncRNA hsa-miR-217 MALAT1 miRanda starBase2
14034 chr11 65271807 65271807 1 + G C BLCA 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTACAGACTTCACAGACAATGCAGTTG < 41bp 1 0.311854689633409 1 0.439967393875122 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 31 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271807 . . 0 hm6A_associated_SNPs_24623 0 0 1 2 65271793 65271816 lncRNA hsa-miR-6807-3p MALAT1 miRanda starBase2
14034 chr22 24313771 24313771 1 + C T BLCA 24313756 + 24313736 24313776 41 CCAATCATAAAAAAGTCATGACCGTCCCTATCTTGCCAATC CCAATCATAAAAAAGTCATGACCGTCCCTATCTTGTCAATC < 41bp 1 0.64252432602264 1 0.897086977958679 experiment 0.71495134795472 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 DDT ENSG00000099977 CDS Human protein_coding chr22:24313756 chr22:24313771 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_24713 0 0 1 2 24313753 24313773 mRNA hsa-miR-31 DDTL miRanda miRanda
14034 chr22 24313771 24313771 1 + C T BLCA 24313756 + 24313736 24313776 41 CCAATCATAAAAAAGTCATGACCGTCCCTATCTTGCCAATC CCAATCATAAAAAAGTCATGACCGTCCCTATCTTGTCAATC < 41bp 1 0.64252432602264 1 0.897086977958679 experiment 0.71495134795472 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 DDT ENSG00000099977 CDS Human protein_coding chr22:24313756 chr22:24313771 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_24713 0 0 1 2 24313753 24313775 mRNA hsa-miR-182 DDTL miRanda miRanda
14034 chr10 12209770 12209770 1 + G C BLCA 12209771 + 12209751 12209791 41 GTGCTAGAGCGTAGGAATAGACCCTGGCGTCCACTGTGAGA GTGCTAGAGCGTAGGAATACACCCTGGCGTCCACTGTGAGA Direct Loss 1 0.345401405156679 1 0.0685800611972809 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 20 NUDT5 ENSG00000165609 CDS Human protein_coding chr10:12209771 chr10:12209770 synonymous SNV . 0 hm6A_associated_SNPs_24764 0 0 0 1 12209767 12209789 mRNA hsa-miR-128 SEC61A2 miRanda miRanda
14034 chr5 74016256 74016256 1 + C T BLCA 74016269 + 74016249 74016289 41 TTAGGTACTCAGAAACAGAAACAACTTTTCATTGGTGGAGA TTAGGTATTCAGAAACAGAAACAACTTTTCATTGGTGGAGA < 41bp 1 0.56273862315907 1 0.197891503572464 experiment 0.874522753681859 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 8 HEXB ENSG00000049860 CDS Human protein_coding chr5:74016269 chr5:74016256 nonsynonymous SNV 0.003 2 hm6A_associated_SNPs_24814 0 0 1 1 74016255 74016276 mRNA hsa-miR-382 HEXB miRanda miRanda
14034 chr9 6433993 6433993 1 + C G BLCA 6434000 + 6433980 6434020 41 GTTACTAGAGCTTCTGATGGACAGTCACGTGGCAAAACTCC GTTACTAGAGCTTGTGATGGACAGTCACGTGGCAAAACTCC < 41bp 1 0.693835897295364 1 0.948060095310211 experiment 0.612328205409271 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 14 UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6434000 chr9:6433993 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_24820 0 0 1 1 6433988 6434008 mRNA hsa-miR-134 UHRF2 miRanda miRanda
14034 chr16 2257260 2257260 1 + G A BLCA 2257248 + 2257228 2257268 41 TCCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTG TCCACATCTGGGACTTGAAAACAGACCACAACAAGCAGCTG < 41bp 1 0.721514119891522 1 0.746955871582031 experiment 0.556971760216956 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 33 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2257248 chr16:2257260 nonsynonymous SNV 0.975 3 hm6A_associated_SNPs_24823 0 0 1 1 2257257 2257280 mRNA hsa-miR-24 MLST8 miRanda miRanda
14034 chr1 54670833 54670833 1 + C A BLCA 54670840 + 54670820 54670860 41 CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG CTCACGCCCGTCTATGGCAGACCACTGAGGAAATCCCCAAG < 41bp 1 0.201938942102435 1 0.924620807170868 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670840 chr1:54670833 synonymous SNV . 0 hm6A_associated_SNPs_24829 0 0 1 1 54670821 54670842 mRNA hsa-miR-346 MRPL37 miRanda miRanda
14034 chr17 39846394 39846394 1 + C T BLCA 39846407 + 39846387 39846427 41 AGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATGCC AGTAATTTAGCTACAGGGTGACCAACGCAAGAACATATGCC < 41bp 1 0.450398206597827 1 0.879438281059265 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846407 chr17:39846394 stopgain 1.000 1 hm6A_associated_SNPs_24838 0 0 1 3 39846386 39846406 mRNA hsa-miR-10a EIF1 miRanda miRanda
14034 chr17 39846394 39846394 1 + C T BLCA 39846407 + 39846387 39846427 41 AGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATGCC AGTAATTTAGCTACAGGGTGACCAACGCAAGAACATATGCC < 41bp 1 0.450398206597827 1 0.879438281059265 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846407 chr17:39846394 stopgain 1.000 1 hm6A_associated_SNPs_24838 0 0 1 3 39846386 39846406 mRNA hsa-miR-10b EIF1 miRanda miRanda
14034 chr17 39846394 39846394 1 + C T BLCA 39846407 + 39846387 39846427 41 AGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATGCC AGTAATTTAGCTACAGGGTGACCAACGCAAGAACATATGCC < 41bp 1 0.450398206597827 1 0.879438281059265 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846407 chr17:39846394 stopgain 1.000 1 hm6A_associated_SNPs_24838 0 0 1 3 39846382 39846404 mRNA hsa-miR-486-5p EIF1 miRanda miRanda
14034 chr2 109492688 109492688 1 + G A BLCA 109492671 + 109492651 109492691 41 CTCTGTTCAATCTGGGTTTAACAAAATGTAACTCCCTGGTC CTCTGTTCAATCTGGGTTTAACAAAATGTAACTCCCTAGTC < 41bp 1 0.538674120969355 1 0.695714473724365 experiment 0.92265175806129 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 38 CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109492671 chr2:109492688 synonymous SNV . 0 hm6A_associated_SNPs_24900 0 0 1 1 109492684 109492707 mRNA hsa-miR-296-3p CCDC138 miRanda miRanda
14034 chr4 115544466 115544466 1 + G A BLCA 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTAGAT < 41bp 1 0.380191190998095 1 0.973299205303192 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 38 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544466 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_24930 0 0 1 1 115544447 115544468 mRNA hsa-miR-377 UGT8 miRanda miRanda
14034 chr3 10133873 10133873 1 + A C BLCA 10133893 + 10133873 10133913 41 AGAGAAACTCCTCTACTGGAACATGGCTGTTCGAGACTTCA CGAGAAACTCCTCTACTGGAACATGGCTGTTCGAGACTTCA < 41bp 1 0.520991413645775 1 0.277001142501831 experiment 0.958017172708449 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10133893 chr3:10133873 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_24979 0 0 1 1 10133865 10133884 mRNA hsa-miR-876-5p FANCD2 miRanda miRanda
14034 chr9 139306631 139306631 1 + G C BLCA 139306632 + 139306612 139306652 41 GCATCTCAGAATAAGTTTGGACAGTTTTGTACAGTAGGAAG GCATCTCAGAATAAGTTTGCACAGTTTTGTACAGTAGGAAG Direct Loss 1 0.731966104390728 1 0.755358815193176 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306632 chr9:139306631 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_24985 0 0 1 3 139306631 139306650 mRNA hsa-miR-370 PMPCA miRanda miRanda
14034 chr9 139306631 139306631 1 + G C BLCA 139306632 + 139306612 139306652 41 GCATCTCAGAATAAGTTTGGACAGTTTTGTACAGTAGGAAG GCATCTCAGAATAAGTTTGCACAGTTTTGTACAGTAGGAAG Direct Loss 1 0.731966104390728 1 0.755358815193176 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306632 chr9:139306631 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_24985 0 0 1 3 139306627 139306651 mRNA hsa-miR-384 PMPCA miRanda miRanda
14034 chr9 139306631 139306631 1 + G C BLCA 139306632 + 139306612 139306652 41 GCATCTCAGAATAAGTTTGGACAGTTTTGTACAGTAGGAAG GCATCTCAGAATAAGTTTGCACAGTTTTGTACAGTAGGAAG Direct Loss 1 0.731966104390728 1 0.755358815193176 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306632 chr9:139306631 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_24985 0 0 1 3 139306626 139306647 mRNA hsa-miR-486-5p PMPCA miRanda miRanda
14034 chr11 65271270 65271270 1 + G T BLCA 65271263 + 65271243 65271283 41 TGAGCGGAAGAACGAATGTAACTTTAAGGCAGGAAAGACAA TGAGCGGAAGAACGAATGTAACTTTAATGCAGGAAAGACAA < 41bp 1 0.0829108511934875 1 0.323143601417542 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 28 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271263 chr11:65271270 . . 0 hm6A_associated_SNPs_24987 0 0 1 1 65271270 65271291 lncRNA hsa-miR-3163 MALAT1 miRanda starBase2
14034 chr11 65271270 65271270 1 + G T BLCA 65271280 + 65271260 65271300 41 GTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAA GTAACTTTAATGCAGGAAAGACAAATTTTATTCTTCATAAA < 41bp 1 0.168031904861533 1 0.219867944717407 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271280 chr11:65271270 . . 0 hm6A_associated_SNPs_24988 0 0 1 1 65271270 65271291 lncRNA hsa-miR-3163 MALAT1 miRanda starBase2
14034 chr20 17968833 17968833 1 + G C BLCA 17968837 + 17968817 17968857 41 TCTGTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT TCTGTGTGATTGATTGCAAGACATCAGAGAAACCAAAGCCT < 41bp 1 0.690669319103038 1 0.00183522701263428 experiment 0.618661361793924 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17968837 chr20:17968833 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_24998 0 0 1 1 17968833 17968855 mRNA hsa-miR-9 C20orf72 miRanda miRanda
14034 chr19 36259446 36259446 1 + G C BLCA 36259441 + 36259421 36259461 41 GATTCCCTGGAGGCCAGAAGACTTTGAATTGTACAGATTCT GATTCCCTGGAGGCCAGAAGACTTTCAATTGTACAGATTCT < 41bp 1 0.726870192783688 1 0.948528110980988 experiment 0.546259614432624 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36259441 chr19:36259446 stoploss 0.846 0 hm6A_associated_SNPs_25043 0 0 1 1 36259437 36259458 mRNA hsa-miR-486-5p C19orf55 miRanda miRanda
14034 chrX 73041822 73041822 1 - G A BLCA 73041830 - 73041810 73041850 41 TAAATAGATCTCTTTCAGAAACAATCCTCAGATAACGCATA TAAATAGATCTCTTTCAGAAACAATCCTTAGATAACGCATA < 41bp 1 0.354718348995075 1 0.0242927074432373 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041830 chrX:73041822 . . 0 hm6A_associated_SNPs_25053 0 0 1 1 73041817 73041838 lncRNA hsa-miR-3200-5p XIST miRanda starBase2
14034 chr22 37425360 37425360 1 + C T BLCA 37425377 + 37425357 37425397 41 GTTCCAGGAGAAGAAAGTGGACCTGTCTAAGCCACTGGTGG GTTTCAGGAGAAGAAAGTGGACCTGTCTAAGCCACTGGTGG < 41bp 1 0.691744553537334 1 0.869758427143097 experiment 0.616510892925332 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 MPST ENSG00000128309 CDS Human protein_coding chr22:37425377 chr22:37425360 synonymous SNV . 0 hm6A_associated_SNPs_25065 0 0 1 2 37425356 37425378 mRNA hsa-miR-204 MPST miRanda miRanda
14034 chr22 37425360 37425360 1 + C T BLCA 37425377 + 37425357 37425397 41 GTTCCAGGAGAAGAAAGTGGACCTGTCTAAGCCACTGGTGG GTTTCAGGAGAAGAAAGTGGACCTGTCTAAGCCACTGGTGG < 41bp 1 0.691744553537334 1 0.869758427143097 experiment 0.616510892925332 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 MPST ENSG00000128309 CDS Human protein_coding chr22:37425377 chr22:37425360 synonymous SNV . 0 hm6A_associated_SNPs_25065 0 0 1 2 37425356 37425378 mRNA hsa-miR-211 MPST miRanda miRanda
14034 chr1 151141526 151141526 1 + G A BLCA 151141537 + 151141517 151141557 41 TTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGA TTTGACTCTAATGAGGAGGAACCACCTGATCTCCCCTTGGA < 41bp 1 0.641033982542065 1 0.17616531252861 experiment 0.71793203491587 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151141537 chr1:151141526 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_25091 0 0 1 2 151141510 151141531 mRNA hsa-miR-376a SCNM1 miRanda miRanda
14034 chr1 151141526 151141526 1 + G A BLCA 151141537 + 151141517 151141557 41 TTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGA TTTGACTCTAATGAGGAGGAACCACCTGATCTCCCCTTGGA < 41bp 1 0.641033982542065 1 0.17616531252861 experiment 0.71793203491587 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151141537 chr1:151141526 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_25091 0 0 1 2 151141509 151141531 mRNA hsa-miR-376b SCNM1 miRanda miRanda
14034 chr22 36661254 36661254 1 + G A BLCA 36661265 + 36661245 36661285 41 AATGATCATGAAAGACAAAAACTGGCACGATAAAGGCCAGC AATGATCATAAAAGACAAAAACTGGCACGATAAAGGCCAGC < 41bp 1 0.786528961043647 1 0.961504817008972 experiment 0.426942077912706 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 10 APOL1 ENSG00000100342 CDS Human protein_coding chr22:36661265 chr22:36661254 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_25117 0 0 1 1 36661235 36661256 mRNA hsa-miR-433 APOL1 miRanda miRanda
14034 chr1 35570219 35570219 1 + C G BLCA 35570237 + 35570217 35570257 41 TTCAAAGTTTCACTCTGCTAACAACTTCATCATGAACTGCT TTGAAAGTTTCACTCTGCTAACAACTTCATCATGAACTGCT < 41bp 1 0.667619635740642 1 0.899178087711334 experiment 0.664760728518716 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35570237 chr1:35570219 stopgain 0.913 0 hm6A_associated_SNPs_25172 0 0 1 2 35570213 35570234 mRNA hsa-miR-125a-3p ZMYM1 miRanda miRanda
14034 chr1 35570219 35570219 1 + C G BLCA 35570237 + 35570217 35570257 41 TTCAAAGTTTCACTCTGCTAACAACTTCATCATGAACTGCT TTGAAAGTTTCACTCTGCTAACAACTTCATCATGAACTGCT < 41bp 1 0.667619635740642 1 0.899178087711334 experiment 0.664760728518716 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35570237 chr1:35570219 stopgain 0.913 0 hm6A_associated_SNPs_25172 0 0 1 2 35570198 35570221 mRNA hsa-miR-488 ZMYM1 miRanda miRanda
14034 chrX 40460035 40460035 1 + C G BLCA 40460024 + 40460004 40460044 41 TAACTTTCAGTTTGCAGATGACATGTACAGTCTTTATGGTG TAACTTTCAGTTTGCAGATGACATGTACAGTGTTTATGGTG < 41bp 1 0.663237768183446 1 0.00353693962097168 experiment 0.673524463633108 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 32 ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40460024 chrX:40460035 nonsynonymous SNV 0.992 2 hm6A_associated_SNPs_25173 0 0 1 1 40460029 40460055 mRNA hsa-miR-217 ATP6AP2 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGGCAAGAAACATTCCAAACAAGCAACAGT < 41bp 1 0.197378432905748 1 0.952645778656006 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272149 . . 0 hm6A_associated_SNPs_25223 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGGCAAGAAACATTCCAAACAAGCAACAGT < 41bp 1 0.197378432905748 1 0.952645778656006 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272149 . . 0 hm6A_associated_SNPs_25223 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGGCAAGAAACATTCCAAACAAGCAACAGT < 41bp 1 0.197378432905748 1 0.952645778656006 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272149 . . 0 hm6A_associated_SNPs_25223 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGGCAAGAAACATTCCAAACAAGCAACAGT < 41bp 1 0.197378432905748 1 0.952645778656006 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272149 . . 0 hm6A_associated_SNPs_25223 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272149 65272149 1 + A G BLCA 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGGCAAGAAACATTCCAAACAAGCAACAGT < 41bp 1 0.197378432905748 1 0.952645778656006 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272149 . . 0 hm6A_associated_SNPs_25223 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272149 65272149 1 + A G BLCA 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGGCAAGAAACATTCCAAACAAGCAACAGT < 41bp 1 0.197378432905748 1 0.952645778656006 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272149 . . 0 hm6A_associated_SNPs_25223 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 65272149 65272149 1 + A G BLCA 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGGCAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.167638421594866 1 0.879563093185425 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272149 . . 0 hm6A_associated_SNPs_25224 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGGCAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.167638421594866 1 0.879563093185425 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272149 . . 0 hm6A_associated_SNPs_25224 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGGCAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.167638421594866 1 0.879563093185425 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272149 . . 0 hm6A_associated_SNPs_25224 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272149 65272149 1 + A G BLCA 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGGCAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.167638421594866 1 0.879563093185425 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272149 . . 0 hm6A_associated_SNPs_25224 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272149 65272149 1 + A G BLCA 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGGCAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.167638421594866 1 0.879563093185425 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272149 . . 0 hm6A_associated_SNPs_25224 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272149 65272149 1 + A G BLCA 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGGCAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.167638421594866 1 0.879563093185425 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272149 . . 0 hm6A_associated_SNPs_25224 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr3 152018007 152018007 1 + C T BLCA 152018011 + 152017991 152018031 41 TAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGG TAGTGTCACACCAATTTGGGACACAAAATGGCTAACACTGG < 41bp 1 0.614080370041916 1 0.869193196296692 experiment 0.771839259916167 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 17 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018011 chr3:152018007 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_25228 0 0 1 1 152017998 152018017 mRNA hsa-miR-599 MBNL1 miRanda miRanda
14034 chr6 44122606 44122606 1 + G A BLCA 44122589 + 44122569 44122609 41 AGACTTCCAGTCTTGCGAGGACAGCCTCATAGAGAATGAGA AGACTTCCAGTCTTGCGAGGACAGCCTCATAGAGAATAAGA < 41bp 1 0.767246117738479 1 0.976071715354919 experiment 0.465507764523043 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122589 chr6:44122606 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_25233 0 0 1 1 44122591 44122612 mRNA hsa-miR-216a TMEM63B miRanda miRanda
14034 chr7 135304605 135304605 1 + G C BLCA 135304622 + 135304602 135304642 41 CCAGAGACCTGATGAACCAGACACCTTAGAAGCAGGTAGAA CCACAGACCTGATGAACCAGACACCTTAGAAGCAGGTAGAA < 41bp 1 0.407444808149539 1 0.841291129589081 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 4 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135304622 chr7:135304605 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25234 0 0 1 2 135304586 135304608 mRNA hsa-miR-330-5p NUP205 miRanda miRanda
14034 chr7 135304605 135304605 1 + G C BLCA 135304622 + 135304602 135304642 41 CCAGAGACCTGATGAACCAGACACCTTAGAAGCAGGTAGAA CCACAGACCTGATGAACCAGACACCTTAGAAGCAGGTAGAA < 41bp 1 0.407444808149539 1 0.841291129589081 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 4 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135304622 chr7:135304605 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25234 0 0 1 2 135304589 135304608 mRNA hsa-miR-326 NUP205 miRanda miRanda
14034 chr12 8866636 8866636 1 + G A BLCA 8866616 + 8866596 8866636 41 TGATGGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTG TGATGGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTA < 41bp 1 0.561291972838318 1 0.420493900775909 experiment 0.877416054323364 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 41 RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8866616 chr12:8866636 synonymous SNV . 0 hm6A_associated_SNPs_25288 0 0 1 1 8866635 8866637 mRNA hsa-miR-136 RIMKLB miRanda miRanda
14034 chr10 101515429 101515429 1 + C G BLCA 101515449 + 101515429 101515469 41 CCCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT GCCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT < 41bp 1 0.733148730391192 1 0.969077110290527 experiment 0.533702539217616 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 CUTC ENSG00000119929 CDS Human protein_coding chr10:101515449 chr10:101515429 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_25299 0 0 1 1 101515423 101515450 mRNA hsa-miR-23b CUTC miRanda miRanda
14034 chr17 7126044 7126044 1 + G C BLCA 7126024 + 7126004 7126044 41 GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTG GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTC < 41bp 1 0.594634850348772 1 0.488778591156006 experiment 0.810730299302457 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ACADVL ENSG00000072778 CDS Human protein_coding chr17:7126024 chr17:7126044 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_25305 0 0 1 4 7126039 7126058 mRNA hsa-miR-99a ACADVL miRanda miRanda
14034 chr17 7126044 7126044 1 + G C BLCA 7126024 + 7126004 7126044 41 GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTG GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTC < 41bp 1 0.594634850348772 1 0.488778591156006 experiment 0.810730299302457 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ACADVL ENSG00000072778 CDS Human protein_coding chr17:7126024 chr17:7126044 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_25305 0 0 1 4 7126038 7126058 mRNA hsa-miR-100 ACADVL miRanda miRanda
14034 chr17 7126044 7126044 1 + G C BLCA 7126024 + 7126004 7126044 41 GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTG GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTC < 41bp 1 0.594634850348772 1 0.488778591156006 experiment 0.810730299302457 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ACADVL ENSG00000072778 CDS Human protein_coding chr17:7126024 chr17:7126044 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_25305 0 0 1 4 7126042 7126063 mRNA hsa-miR-183 ACADVL miRanda miRanda
14034 chr17 7126044 7126044 1 + G C BLCA 7126024 + 7126004 7126044 41 GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTG GATGGGCATCAAGGCTTCAAACACAGCAGAGGTGTTCTTTC < 41bp 1 0.594634850348772 1 0.488778591156006 experiment 0.810730299302457 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ACADVL ENSG00000072778 CDS Human protein_coding chr17:7126024 chr17:7126044 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_25305 0 0 1 4 7126037 7126058 mRNA hsa-miR-99b ACADVL miRanda miRanda
14034 chr16 58550536 58550536 1 + G C BLCA 58550538 + 58550518 58550558 41 CTCAGGGTTCGCTCCCTAGAACTCTACCACCAGCTGGTGGC CTCAGGGTTCGCTCCCTACAACTCTACCACCAGCTGGTGGC Direct Loss 1 0.446440436892303 1 0.956377744674683 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550538 chr16:58550536 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_25358 0 0 1 1 58550529 58550552 mRNA hsa-miR-138 SETD6 miRanda miRanda
14034 chr2 204244965 204244965 1 + G A BLCA 204244982 + 204244962 204245002 41 GAAGAGAAATTGGTATTTTGACTACCAATAAAAACACTTCA GAAAAGAAATTGGTATTTTGACTACCAATAAAAACACTTCA < 41bp 1 0.319130147005929 1 0.946877241134644 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 ABI2 ENSG00000138443 CDS Human protein_coding chr2:204244982 chr2:204244965 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_25389 0 0 1 1 204244945 204244965 mRNA hsa-miR-431 ABI2 miRanda miRanda
14034 chr15 45884353 45884353 1 + G A BLCA 45884342 + 45884322 45884362 41 GCTGGGGACAGGTTTAAGTGACACTTCTCCAGATGAAGGGT GCTGGGGACAGGTTTAAGTGACACTTCTCCAAATGAAGGGT < 41bp 1 0.681270415544636 1 0.6455437541008 experiment 0.637459168910728 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 BLOC1S6 ENSG00000104164 CDS Human protein_coding chr15:45884342 chr15:45884353 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_25396 0 0 1 1 45884339 45884361 mRNA hsa-miR-205 PLDN miRanda miRanda
14034 chr11 65272453 65272453 1 + C T BLCA 65272437 + 65272417 65272457 41 TTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGT TTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTTCAGT < 41bp 1 0.142893851546808 1 0.900725603103638 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272437 chr11:65272453 . . 0 hm6A_associated_SNPs_25418 0 0 1 1 65272453 65272474 lncRNA hsa-miR-6509-3p MALAT1 miRanda starBase2
14034 chr11 65270170 65270170 1 + G A BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAAAGAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.168060719689258 1 0.847369849681854 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270170 . 0.994 0 hm6A_associated_SNPs_25443 0 0 1 3 65270164 65270185 lncRNA hsa-miR-28-5p MALAT1 miRanda starBase2
14034 chr11 65270170 65270170 1 + G A BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAAAGAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.168060719689258 1 0.847369849681854 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270170 . 0.994 0 hm6A_associated_SNPs_25443 0 0 1 3 65270163 65270185 lncRNA hsa-miR-3139 MALAT1 miRanda starBase2
14034 chr11 65270170 65270170 1 + G A BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAAAGAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.168060719689258 1 0.847369849681854 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270170 . 0.994 0 hm6A_associated_SNPs_25443 0 0 1 3 65270163 65270185 lncRNA hsa-miR-708-5p MALAT1 miRanda starBase2
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676214 95676240 mRNA hsa-let-7a VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676220 95676240 mRNA hsa-let-7b VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676215 95676240 mRNA hsa-let-7c VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676214 95676240 mRNA hsa-let-7d VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676220 95676240 mRNA hsa-let-7e VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676214 95676240 mRNA hsa-let-7f VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676215 95676240 mRNA hsa-miR-98 VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676220 95676240 mRNA hsa-let-7g VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676220 95676240 mRNA hsa-let-7i VEZT miRanda miRanda
14034 chr12 95676227 95676227 1 + C T BLCA 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCT < 41bp 1 0.38104932449641 1 0.133489221334457 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676227 stopgain 0.997 1 hm6A_associated_SNPs_25456 0 0 1 10 95676218 95676238 mRNA hsa-miR-379 VEZT miRanda miRanda
14034 chr11 65268496 65268496 1 + G A BLCA 65268509 + 65268489 65268529 41 TTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCA TTTACACAAATTTGAGGAAAACCAAATGAATTTGATAGCCA < 41bp 1 0.0067774418476382 1 0.855293929576874 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 8 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268509 chr11:65268496 . . 0 hm6A_associated_SNPs_25538 0 0 1 1 65268488 65268508 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr12 112460294 112460294 1 + G C BLCA 112460302 + 112460282 112460322 41 GATCATGGGGAAGATCTTAGACCAAGGGGAGGACTTCCCAG GATCATGGGGAACATCTTAGACCAAGGGGAGGACTTCCCAG < 41bp 1 0.752365001331206 1 0.993513345718384 experiment 0.495269997337588 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 13 ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460302 chr12:112460294 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_25539 0 0 1 1 112460279 112460301 mRNA hsa-miR-499-5p ERP29 miRanda miRanda
14034 chr6 31591626 31591626 1 + C T BLCA 31591646 + 31591626 31591666 41 CACTAGTGCCAAAAGACGGAACAGGATGGGCAAGCAAACAG TACTAGTGCCAAAAGACGGAACAGGATGGGCAAGCAAACAG < 41bp 1 0.725040086455722 1 0.942680835723877 experiment 0.549919827088555 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31591646 chr6:31591626 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25584 0 0 1 2 31591615 31591638 mRNA hsa-miR-96 BAT2 miRanda miRanda
14034 chr6 31591626 31591626 1 + C T BLCA 31591646 + 31591626 31591666 41 CACTAGTGCCAAAAGACGGAACAGGATGGGCAAGCAAACAG TACTAGTGCCAAAAGACGGAACAGGATGGGCAAGCAAACAG < 41bp 1 0.725040086455722 1 0.942680835723877 experiment 0.549919827088555 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31591646 chr6:31591626 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25584 0 0 1 2 31591617 31591638 mRNA hsa-miR-1271 BAT2 miRanda miRanda
14034 chr9 108536171 108536171 1 + C T BLCA 108536167 + 108536147 108536187 41 TAACCATGATGACTACACAGACTTCTACTATGACATTTGCT TAACCATGATGACTACACAGACTTTTACTATGACATTTGCT < 41bp 1 0.592228223330272 1 0.975831627845764 experiment 0.815543553339457 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108536167 chr9:108536171 nonsynonymous SNV 0.263 0 hm6A_associated_SNPs_25587 0 0 1 1 108536156 108536176 mRNA hsa-miR-411 TMEM38B miRanda miRanda
14034 chr12 95676322 95676322 1 + G T BLCA 95676302 + 95676282 95676322 41 AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACCG AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACCT < 41bp 1 0.415500659294421 1 0.228374481201172 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 41 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676302 chr12:95676322 synonymous SNV . 0 hm6A_associated_SNPs_25601 0 0 1 2 95676311 95676330 mRNA hsa-miR-141 VEZT miRanda miRanda
14034 chr12 95676322 95676322 1 + G T BLCA 95676302 + 95676282 95676322 41 AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACCG AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACCT < 41bp 1 0.415500659294421 1 0.228374481201172 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 41 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676302 chr12:95676322 synonymous SNV . 0 hm6A_associated_SNPs_25601 0 0 1 2 95676311 95676330 mRNA hsa-miR-200a VEZT miRanda miRanda
14034 chr19 49519079 49519079 1 + G A BLCA 49519089 + 49519069 49519109 41 CACAGAAGGCGAGACCATGGACACCTCCTGAGTTGGATGTC CACAGAAGGCAAGACCATGGACACCTCCTGAGTTGGATGTC < 41bp 1 0.664443924811009 1 0.982748627662659 experiment 0.671112150377981 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49519089 chr19:49519079 nonsynonymous SNV 0.955 0 hm6A_associated_SNPs_25610 0 0 1 1 49519077 49519097 mRNA hsa-miR-122 RUVBL2 miRanda miRanda
14034 chr19 9453579 9453579 1 + G T BLCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATTAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.345472109140925 1 0.975313186645508 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453579 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_25638 0 0 1 5 9453578 9453597 mRNA hsa-miR-27a ZNF559 miRanda miRanda
14034 chr19 9453579 9453579 1 + G T BLCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATTAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.345472109140925 1 0.975313186645508 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453579 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_25638 0 0 1 5 9453573 9453594 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453579 9453579 1 + G T BLCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATTAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.345472109140925 1 0.975313186645508 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453579 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_25638 0 0 1 5 9453571 9453594 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453579 9453579 1 + G T BLCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATTAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.345472109140925 1 0.975313186645508 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453579 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_25638 0 0 1 5 9453578 9453597 mRNA hsa-miR-27b ZNF559 miRanda miRanda
14034 chr19 9453579 9453579 1 + G T BLCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATTAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.345472109140925 1 0.975313186645508 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453579 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_25638 0 0 1 5 9453572 9453593 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr12 66698843 66698843 1 + G A BLCA 66698825 + 66698805 66698845 41 ATCTTAGGGAAACACTAAGAACTTTCCACAAGGAAACTGGA ATCTTAGGGAAACACTAAGAACTTTCCACAAGGAAACTAGA < 41bp 1 0.522793497393982 1 0.959363102912903 experiment 0.954413005212035 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 HELB ENSG00000127311 CDS Human protein_coding chr12:66698825 chr12:66698843 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_25650 0 0 1 1 66698823 66698846 mRNA hsa-miR-145 HELB miRanda miRanda
14034 chr6 33383614 33383614 1 + C T BLCA 33383622 + 33383602 33383642 41 TCACATTGGTTTCCCCACAGACATCCCTAAAAGTGCCCCCC TCACATTGGTTTTCCCACAGACATCCCTAAAAGTGCCCCCC < 41bp 1 0.798038641642794 1 0.0201789140701294 experiment 0.403922716714412 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 PHF1 ENSG00000112511 CDS Human protein_coding chr6:33383622 chr6:33383614 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25659 0 0 1 1 33383599 33383620 mRNA hsa-miR-491-5p PHF1 miRanda miRanda
14034 chr15 34519944 34519944 1 + C T BLCA 34519926 + 34519906 34519946 41 ATCGCCTTGGGTCCCCTCAAACAGATTCCCATGAATCTCTT ATCGCCTTGGGTCCCCTCAAACAGATTCCCATGAATCTTTT < 41bp 1 0.730167934692393 1 0.0234584510326385 experiment 0.539664130615213 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34519926 chr15:34519944 synonymous SNV . 0 hm6A_associated_SNPs_25671 0 0 1 2 34519924 34519948 mRNA hsa-miR-185 TMEM85 miRanda miRanda
14034 chr15 34519944 34519944 1 + C T BLCA 34519926 + 34519906 34519946 41 ATCGCCTTGGGTCCCCTCAAACAGATTCCCATGAATCTCTT ATCGCCTTGGGTCCCCTCAAACAGATTCCCATGAATCTTTT < 41bp 1 0.730167934692393 1 0.0234584510326385 experiment 0.539664130615213 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34519926 chr15:34519944 synonymous SNV . 0 hm6A_associated_SNPs_25671 0 0 1 2 34519934 34519955 mRNA hsa-miR-433 TMEM85 miRanda miRanda
14034 chr1 151139670 151139670 1 + G C BLCA 151139655 + 151139635 151139675 41 GAAAGAAAGCAGAATCCAAAACATCAGAATGAATTGAGAAG GAAAGAAAGCAGAATCCAAAACATCAGAATGAATTCAGAAG < 41bp 1 0.650519230914927 1 0.811939835548401 experiment 0.698961538170146 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151139655 chr1:151139670 nonsynonymous SNV 0.631 0 hm6A_associated_SNPs_25684 0 0 1 1 151139669 151139690 mRNA hsa-miR-9 SCNM1 miRanda miRanda
14034 chr13 111287865 111287865 1 + C T BLCA 111287862 + 111287842 111287882 41 AGCCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAA AGCCATGGATCTGTGCTAAGACTTAGCCAAGCCCTGGGCAA < 41bp 1 0.449907274548996 1 0.754511475563049 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 NAXD ENSG00000213995 CDS Human protein_coding chr13:111287862 chr13:111287865 synonymous SNV . 0 hm6A_associated_SNPs_25711 0 0 1 1 111287856 111287876 mRNA hsa-miR-296-3p CARKD miRanda miRanda
14034 chr19 49604717 49604717 1 + G C BLCA 49604709 + 49604689 49604729 41 TATGCCTTCATCGAGTACGAACACGAGCGAGACATGCACTG TATGCCTTCATCGAGTACGAACACGAGCCAGACATGCACTG < 41bp 1 0.685501793768855 1 0.915643572807312 experiment 0.62899641246229 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 29 SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49604709 chr19:49604717 nonsynonymous SNV 0.977 4 hm6A_associated_SNPs_25717 0 0 1 1 49604715 49604728 mRNA hsa-miR-138 SNRNP70 miRanda miRanda
14034 chr2 190728630 190728630 1 + C G BLCA 190728620 + 190728600 190728640 41 CCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCA CCCAGAAGCACAAGTTAAAAACCTCATTATGTAATCAACCA < 41bp 1 0.572145798948867 1 0.960163950920105 experiment 0.855708402102267 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 31 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728620 chr2:190728630 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_25748 0 0 1 1 190728623 190728644 mRNA hsa-miR-9 PMS1 miRanda miRanda
14034 chr2 190728630 190728630 1 + C G BLCA 190728643 + 190728623 190728663 41 TCATTATCTAATCAACCAAAACTTGATGAACTCCTTCAGTC TCATTATGTAATCAACCAAAACTTGATGAACTCCTTCAGTC < 41bp 1 0.727703512657693 1 0.965346932411194 experiment 0.544592974684615 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728643 chr2:190728630 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_25749 0 0 1 1 190728623 190728644 mRNA hsa-miR-9 PMS1 miRanda miRanda
14034 chr6 32944710 32944710 1 + C G BLCA 32944697 + 32944677 32944717 41 CATCATTAAGCACCCCATGGACCTCAGCACTGTCAAGGTAC CATCATTAAGCACCCCATGGACCTCAGCACTGTGAAGGTAC < 41bp 1 0.660780193275312 1 0.938706278800964 experiment 0.678439613449376 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32944697 chr6:32944710 synonymous SNV . 0 hm6A_associated_SNPs_25767 0 0 1 1 32944704 32944713 mRNA hsa-miR-590-3p BRD2 miRanda miRanda
14034 chr1 53236939 53236939 1 + C G BLCA 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTGAATTCATTAACTCTGTCCCTCGAGGATCCT < 41bp 1 0.699415314966353 1 0.931684195995331 experiment 0.601169370067295 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236939 synonymous SNV . 0 hm6A_associated_SNPs_25778 0 0 1 1 53236920 53236943 mRNA hsa-miR-185 ZYG11B miRanda miRanda
14034 chr10 38654399 38654399 1 + A T BLCA 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG TTCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG < 41bp 1 0.354703020937107 1 0.94254457950592 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654399 . . 0 hm6A_associated_SNPs_25862 0 0 1 3 38654382 38654402 mRNA hsa-miR-219-5p HSD17B7P2 miRanda miRanda
14034 chr10 38654399 38654399 1 + A T BLCA 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG TTCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG < 41bp 1 0.354703020937107 1 0.94254457950592 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654399 . . 0 hm6A_associated_SNPs_25862 0 0 1 3 38654379 38654401 mRNA hsa-miR-367 HSD17B7P2 miRanda miRanda
14034 chr10 38654399 38654399 1 + A T BLCA 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG TTCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG < 41bp 1 0.354703020937107 1 0.94254457950592 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654399 . . 0 hm6A_associated_SNPs_25862 0 0 1 3 38654381 38654403 mRNA hsa-miR-876-5p HSD17B7P2 miRanda miRanda
14034 chr1 76254912 76254912 1 + G A BLCA 76254895 + 76254875 76254915 41 GTGGCATCTATTGGGGTCTGACAGTAATGGATCTCATGGGA GTGGCATCTATTGGGGTCTGACAGTAATGGATCTCATAGGA < 41bp 1 0.759843826141973 1 0.464572548866272 experiment 0.480312347716054 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 38 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76254895 chr1:76254912 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25879 0 0 1 1 76254902 76254922 mRNA hsa-miR-382 RABGGTB miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798757 72798780 mRNA hsa-miR-17 BTF3 miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798758 72798780 mRNA hsa-miR-20a BTF3 miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798758 72798780 mRNA hsa-miR-93 BTF3 miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798757 72798780 mRNA hsa-miR-106a BTF3 miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798760 72798780 mRNA hsa-miR-106b BTF3 miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798767 72798789 mRNA hsa-miR-296-3p BTF3 miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798757 72798780 mRNA hsa-miR-20b BTF3 miRanda miRanda
14034 chr5 72798768 72798768 1 + G A BLCA 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAATGATCCACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.765754130074634 1 0.260576367378235 experiment 0.468491739850732 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 8 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798768 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_25920 0 0 1 8 72798759 72798780 mRNA hsa-miR-519d BTF3 miRanda miRanda
14034 chr10 70513676 70513676 1 + G C BLCA 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATTTGTATATACCTAGTGACTTTTTTCATGCTCAATTTA < 41bp 1 0.434213217722882 1 0.834948897361755 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513676 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_25976 0 0 1 1 70513673 70513696 mRNA hsa-miR-10a CCAR1 miRanda miRanda
14034 chr11 65267742 65267742 1 + G A BLCA 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATGTAAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.108228169520846 1 0.994312524795532 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267742 . . 0 hm6A_associated_SNPs_26027 0 0 1 4 65267722 65267744 lncRNA hsa-miR-130a-5p MALAT1 miRanda starBase2
14034 chr11 65267742 65267742 1 + G A BLCA 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATGTAAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.108228169520846 1 0.994312524795532 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267742 . . 0 hm6A_associated_SNPs_26027 0 0 1 4 65267724 65267744 lncRNA hsa-miR-23a-3p MALAT1 miRanda starBase2
14034 chr11 65267742 65267742 1 + G A BLCA 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATGTAAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.108228169520846 1 0.994312524795532 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267742 . . 0 hm6A_associated_SNPs_26027 0 0 1 4 65267724 65267744 lncRNA hsa-miR-23b-3p MALAT1 miRanda starBase2
14034 chr11 65267742 65267742 1 + G A BLCA 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATGTAAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.108228169520846 1 0.994312524795532 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267742 . . 0 hm6A_associated_SNPs_26027 0 0 1 4 65267719 65267744 lncRNA hsa-miR-23c MALAT1 miRanda starBase2
14034 chr7 86794344 86794344 1 + C A BLCA 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTAATTC < 41bp 1 0.608813455376844 1 0.922421753406525 experiment 0.782373089246313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794344 synonymous SNV . 0 hm6A_associated_SNPs_26054 0 0 1 4 86794337 86794358 mRNA hsa-miR-34a DMTF1 miRanda miRanda
14034 chr7 86794344 86794344 1 + C A BLCA 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTAATTC < 41bp 1 0.608813455376844 1 0.922421753406525 experiment 0.782373089246313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794344 synonymous SNV . 0 hm6A_associated_SNPs_26054 0 0 1 4 86794337 86794358 mRNA hsa-miR-34c-5p DMTF1 miRanda miRanda
14034 chr7 86794344 86794344 1 + C A BLCA 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTAATTC < 41bp 1 0.608813455376844 1 0.922421753406525 experiment 0.782373089246313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794344 synonymous SNV . 0 hm6A_associated_SNPs_26054 0 0 1 4 86794337 86794358 mRNA hsa-miR-449a DMTF1 miRanda miRanda
14034 chr7 86794344 86794344 1 + C A BLCA 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTAATTC < 41bp 1 0.608813455376844 1 0.922421753406525 experiment 0.782373089246313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794344 synonymous SNV . 0 hm6A_associated_SNPs_26054 0 0 1 4 86794337 86794358 mRNA hsa-miR-449b DMTF1 miRanda miRanda
14034 chr6 142487421 142487421 1 + C G BLCA 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTGGCAAATTT < 41bp 1 0.301570661766053 1 0.473951518535614 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 33 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487421 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_26100 0 0 1 6 142487393 142487421 mRNA hsa-miR-181a VTA1 miRanda miRanda
14034 chr6 142487421 142487421 1 + C G BLCA 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTGGCAAATTT < 41bp 1 0.301570661766053 1 0.473951518535614 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 33 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487421 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_26100 0 0 1 6 142487393 142487421 mRNA hsa-miR-181b VTA1 miRanda miRanda
14034 chr6 142487421 142487421 1 + C G BLCA 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTGGCAAATTT < 41bp 1 0.301570661766053 1 0.473951518535614 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 33 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487421 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_26100 0 0 1 6 142487400 142487421 mRNA hsa-miR-181c VTA1 miRanda miRanda
14034 chr6 142487421 142487421 1 + C G BLCA 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTGGCAAATTT < 41bp 1 0.301570661766053 1 0.473951518535614 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 33 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487421 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_26100 0 0 1 6 142487406 142487427 mRNA hsa-miR-450a VTA1 miRanda miRanda
14034 chr6 142487421 142487421 1 + C G BLCA 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTGGCAAATTT < 41bp 1 0.301570661766053 1 0.473951518535614 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 33 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487421 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_26100 0 0 1 6 142487393 142487421 mRNA hsa-miR-181d VTA1 miRanda miRanda
14034 chr6 142487421 142487421 1 + C G BLCA 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTGGCAAATTT < 41bp 1 0.301570661766053 1 0.473951518535614 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 33 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487421 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_26100 0 0 1 6 142487405 142487426 mRNA hsa-miR-758 VTA1 miRanda miRanda
14034 chr11 607297 607297 1 + G A BLCA 607300 + 607280 607320 41 TGGGGCGGTTCAGGCTCGGAACTTGTCAAATGGGAGTGTGC TGGGGCGGTTCAGGCTCAGAACTTGTCAAATGGGAGTGTGC < 41bp 1 0.775067060155585 1 0.95396101474762 experiment 0.44986587968883 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 18 PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607300 chr11:607297 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_26105 0 0 1 1 607278 607299 mRNA hsa-miR-615-3p PHRF1 miRanda miRanda
14034 chr6 43581702 43581702 1 + C G BLCA 43581716 + 43581696 43581736 41 AGCCCTCATTACCTTTTCAAACCAGTCAAAGTACAGGAACT AGCCCTGATTACCTTTTCAAACCAGTCAAAGTACAGGAACT < 41bp 1 0.590113042606767 1 0.980297565460205 experiment 0.819773914786466 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;Control 7 POLH ENSG00000170734 CDS Human protein_coding chr6:43581716 chr6:43581702 stopgain 0.026 0 hm6A_associated_SNPs_26170 0 0 1 1 43581680 43581702 mRNA hsa-miR-296-3p POLH miRanda miRanda
14034 chr9 32425899 32425899 1 + G A BLCA 32425903 + 32425883 32425923 41 TAAGACCTTTATCTATGATAACACTGAATTCACCCTTGCTC TAAGACCTTTATCTATAATAACACTGAATTCACCCTTGCTC < 41bp 1 0.755214679672692 1 0.0460146963596344 experiment 0.489570640654615 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 17 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32425903 chr9:32425899 nonsynonymous SNV 0.239 0 hm6A_associated_SNPs_26183 0 0 0 2 32425881 32425901 mRNA hsa-miR-376a ACO1 miRanda miRanda
14034 chr9 32425899 32425899 1 + G A BLCA 32425903 + 32425883 32425923 41 TAAGACCTTTATCTATGATAACACTGAATTCACCCTTGCTC TAAGACCTTTATCTATAATAACACTGAATTCACCCTTGCTC < 41bp 1 0.755214679672692 1 0.0460146963596344 experiment 0.489570640654615 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 17 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32425903 chr9:32425899 nonsynonymous SNV 0.239 0 hm6A_associated_SNPs_26183 0 0 0 2 32425879 32425901 mRNA hsa-miR-376b ACO1 miRanda miRanda
14034 chr20 17950748 17950748 1 + G C BLCA 17950742 + 17950722 17950762 41 GAAGATGCTTTGCTCTGTGGACCCGTGAGCAAGCATAAGCT GAAGATGCTTTGCTCTGTGGACCCGTCAGCAAGCATAAGCT < 41bp 1 0.467514079659725 1 0.996035575866699 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950742 chr20:17950748 synonymous SNV . 0 hm6A_associated_SNPs_26189 0 0 1 2 17950741 17950763 mRNA hsa-miR-21 C20orf72 miRanda miRanda
14034 chr20 17950748 17950748 1 + G C BLCA 17950742 + 17950722 17950762 41 GAAGATGCTTTGCTCTGTGGACCCGTGAGCAAGCATAAGCT GAAGATGCTTTGCTCTGTGGACCCGTCAGCAAGCATAAGCT < 41bp 1 0.467514079659725 1 0.996035575866699 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950742 chr20:17950748 synonymous SNV . 0 hm6A_associated_SNPs_26189 0 0 1 2 17950742 17950763 mRNA hsa-miR-590-5p C20orf72 miRanda miRanda
14034 chr20 17950748 17950748 1 + G C BLCA 17950768 + 17950748 17950788 41 GAGCAAGCATAAGCTGCCAAACCAAGGTGAGGACAGACGAG CAGCAAGCATAAGCTGCCAAACCAAGGTGAGGACAGACGAG < 41bp 1 0.472706698840119 1 0.994547128677368 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950768 chr20:17950748 synonymous SNV . 0 hm6A_associated_SNPs_26190 0 0 1 2 17950741 17950763 mRNA hsa-miR-21 C20orf72 miRanda miRanda
14034 chr20 17950748 17950748 1 + G C BLCA 17950768 + 17950748 17950788 41 GAGCAAGCATAAGCTGCCAAACCAAGGTGAGGACAGACGAG CAGCAAGCATAAGCTGCCAAACCAAGGTGAGGACAGACGAG < 41bp 1 0.472706698840119 1 0.994547128677368 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950768 chr20:17950748 synonymous SNV . 0 hm6A_associated_SNPs_26190 0 0 1 2 17950742 17950763 mRNA hsa-miR-590-5p C20orf72 miRanda miRanda
14034 chr9 106889711 106889711 1 + G A BLCA 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAAACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA < 41bp 1 0.638222050100344 1 0.128573656082153 experiment 0.723555899799312 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 4 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889711 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_26191 0 0 1 2 106889705 106889729 mRNA hsa-miR-450a SMC2 miRanda miRanda
14034 chr9 106889711 106889711 1 + G A BLCA 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAAACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA < 41bp 1 0.638222050100344 1 0.128573656082153 experiment 0.723555899799312 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 4 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889711 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_26191 0 0 1 2 106889698 106889719 mRNA hsa-miR-599 SMC2 miRanda miRanda
14034 chr14 74516507 74516507 1 + C G BLCA 74516501 + 74516481 74516521 41 AGAAGGTAGTAAACTTGGAGACTGCTCTGAGTTACATGACC AGAAGGTAGTAAACTTGGAGACTGCTGTGAGTTACATGACC < 41bp 1 0.294224258801606 1 0.802616477012634 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 27 BBOF1 ENSG00000119636 CDS Human protein_coding chr14:74516501 chr14:74516507 nonsynonymous SNV 0.826 0 hm6A_associated_SNPs_26212 0 0 0 1 74516504 74516526 mRNA hsa-miR-9 C14orf45 miRanda miRanda
14034 chr16 48368170 48368170 1 + C T BLCA 48368175 + 48368155 48368195 41 AAAACCTGAATCTATCAGTGACACTACTGACTTGGCTCTAC AAAACCTGAATCTATTAGTGACACTACTGACTTGGCTCTAC < 41bp 1 0.652384235052594 1 0.63789302110672 experiment 0.695231529894812 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 16 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48368175 chr16:48368170 synonymous SNV . 0 hm6A_associated_SNPs_26234 0 0 0 1 48368160 48368182 mRNA hsa-miR-142-3p LONP2 miRanda miRanda
14034 chr17 42744034 42744034 1 + C A BLCA 42744051 + 42744031 42744071 41 AGACAAATGATACAGCTAAGACAACATTCCAAGAATATCCA AGAAAAATGATACAGCTAAGACAACATTCCAAGAATATCCA < 41bp 1 0.762326875509485 1 0.918142437934875 experiment 0.475346248981031 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 4 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744051 chr17:42744034 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_26299 0 0 0 1 42744022 42744048 mRNA hsa-miR-21 C17orf104 miRanda miRanda
14034 chr11 65271197 65271197 1 + C T BLCA 65271215 + 65271195 65271235 41 TTCAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGAT TTTAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGAT < 41bp 1 0.482922637580577 1 0.140682995319366 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271215 chr11:65271197 . . 0 hm6A_associated_SNPs_26307 0 0 1 1 65271180 65271200 lncRNA hsa-miR-4766-5p MALAT1 miRanda starBase2
14034 chr16 29819563 29819563 1 + C G BLCA 29819578 + 29819558 29819598 41 CACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACG CACCTGAACAGTCACGTCAGACAAGTGCACTCAACAGAACG < 41bp 1 0.354964178243516 1 0.774140000343323 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 MAZ ENSG00000103495 CDS Human protein_coding chr16:29819578 chr16:29819563 nonsynonymous SNV . 0 hm6A_associated_SNPs_26359 0 0 1 2 29819553 29819573 mRNA hsa-miR-134 MAZ miRanda miRanda
14034 chr16 29819563 29819563 1 + C G BLCA 29819578 + 29819558 29819598 41 CACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACG CACCTGAACAGTCACGTCAGACAAGTGCACTCAACAGAACG < 41bp 1 0.354964178243516 1 0.774140000343323 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 MAZ ENSG00000103495 CDS Human protein_coding chr16:29819578 chr16:29819563 nonsynonymous SNV . 0 hm6A_associated_SNPs_26359 0 0 1 2 29819544 29819564 mRNA hsa-miR-202 MAZ miRanda miRanda
14034 chr14 24113724 24113724 1 + G A BLCA 24113709 + 24113689 24113729 41 CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGGAATTA CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGAAATTA < 41bp 1 0.167454648907659 1 0.0288763642311096 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 36 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113709 chr14:24113724 nonsynonymous SNV 0.695 4 hm6A_associated_SNPs_26364 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113724 24113724 1 + G A BLCA 24113735 + 24113715 24113755 41 TGGTTCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTG TGGTTCCAGAAATTATCAAAACTGACTTCAGCAAAGTGGTG < 41bp 1 0.141313933760313 1 0.19122102856636 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113735 chr14:24113724 nonsynonymous SNV 0.695 4 hm6A_associated_SNPs_26365 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113724 24113724 1 + G A BLCA 24113739 + 24113719 24113759 41 TCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA TCCAGAAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA < 41bp 1 0.194445003374561 1 0.103452801704407 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 6 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113739 chr14:24113724 nonsynonymous SNV 0.695 4 hm6A_associated_SNPs_26366 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr11 65270182 65270182 1 + C G BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAGAAAACAGCTGCTTGGTGAATTGAT < 41bp 1 0.197467497965929 1 0.861812710762024 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270182 . 0.991 0 hm6A_associated_SNPs_26370 0 0 1 3 65270164 65270185 lncRNA hsa-miR-28-5p MALAT1 miRanda starBase2
14034 chr11 65270182 65270182 1 + C G BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAGAAAACAGCTGCTTGGTGAATTGAT < 41bp 1 0.197467497965929 1 0.861812710762024 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270182 . 0.991 0 hm6A_associated_SNPs_26370 0 0 1 3 65270163 65270185 lncRNA hsa-miR-3139 MALAT1 miRanda starBase2
14034 chr11 65270182 65270182 1 + C G BLCA 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAGAAAACAGCTGCTTGGTGAATTGAT < 41bp 1 0.197467497965929 1 0.861812710762024 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270182 . 0.991 0 hm6A_associated_SNPs_26370 0 0 1 3 65270163 65270185 lncRNA hsa-miR-708-5p MALAT1 miRanda starBase2
14034 chr6 71464697 71464697 1 + G T BLCA 71464715 + 71464695 71464735 41 ATGGGAAATACTAAAGCAAGACTACTCTATGAAGCCAATCT ATTGGAAATACTAAAGCAAGACTACTCTATGAAGCCAATCT < 41bp 1 0.293402191575564 1 0.758513152599335 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71464715 chr6:71464697 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_26392 0 0 1 1 71464697 71464717 mRNA hsa-miR-431 SMAP1 miRanda miRanda
14034 chr8 32621438 32621438 1 + G C BLCA 32621425 + 32621405 32621445 41 CCCTTCATGGAAGAAGAGAGACCTCTACTTCTCGTGACACC CCCTTCATGGAAGAAGAGAGACCTCTACTTCTCCTGACACC < 41bp 1 0.542700134781629 1 0.946215867996216 experiment 0.914599730436743 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 NRG1 ENSG00000157168 CDS Human protein_coding chr8:32621425 chr8:32621438 nonsynonymous SNV 0.384 2 hm6A_associated_SNPs_26397 0 0 0 1 32621437 32621459 mRNA hsa-miR-615-3p NRG1 miRanda miRanda
14034 chr14 24113723 24113723 1 + G A BLCA 24113709 + 24113689 24113729 41 CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGGAATTA CCCCAAGGACATCCGGGTAAACTGCGTGGTTCCAAGAATTA < 41bp 1 0.181516624850103 1 0.0242086350917816 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 35 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113709 chr14:24113723 nonsynonymous SNV 0.826 4 hm6A_associated_SNPs_26398 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113723 24113723 1 + G A BLCA 24113735 + 24113715 24113755 41 TGGTTCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTG TGGTTCCAAGAATTATCAAAACTGACTTCAGCAAAGTGGTG < 41bp 1 0.141779241523781 1 0.141349911689758 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 9 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113735 chr14:24113723 nonsynonymous SNV 0.826 4 hm6A_associated_SNPs_26399 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113723 24113723 1 + G A BLCA 24113739 + 24113719 24113759 41 TCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA TCCAAGAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA < 41bp 1 0.212174460302995 1 0.0792516767978668 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 5 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113739 chr14:24113723 nonsynonymous SNV 0.826 4 hm6A_associated_SNPs_26400 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr11 65269421 65269421 1 + G C BLCA 65269411 + 65269391 65269431 41 TAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAA TAGTTTATGATTGCAGATAAACTCATGCCACAGAACTTAAA < 41bp 1 0.158362651534793 1 0.90494167804718 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|32341503;GSE131316;m6A-Label-seq;HEK293T;Control 31 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269411 chr11:65269421 . . 0 hm6A_associated_SNPs_26474 0 0 1 1 65269418 65269438 lncRNA hsa-miR-499a-5p MALAT1 miRanda starBase2
14034 chr3 9712777 9712777 1 + C G BLCA 9712773 + 9712753 9712793 41 TGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACC TGATAAGGTCAGAGGCTATGACATGAAGCTGCTTCGATACC < 41bp 1 0.735716399691491 1 0.0365095436573029 experiment 0.528567200617019 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9712773 chr3:9712777 stopgain 0.999 5 hm6A_associated_SNPs_26484 0 0 1 1 9712760 9712783 mRNA hsa-miR-590-5p MTMR14 miRanda miRanda
14034 chr6 42985893 42985893 1 + T G BLCA 42985902 + 42985882 42985922 41 GGCGGACTGTTTTTCCAATGACATTCACAAGCTAGATACCA GGCGGACTGTTGTTCCAATGACATTCACAAGCTAGATACCA < 41bp 1 0.748878906758467 1 0.149322360754013 experiment 0.502242186483067 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985902 chr6:42985893 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_26522 0 0 1 2 42985883 42985893 mRNA hsa-miR-212 KLHDC3 miRanda miRanda
14034 chr6 42985893 42985893 1 + T G BLCA 42985902 + 42985882 42985922 41 GGCGGACTGTTTTTCCAATGACATTCACAAGCTAGATACCA GGCGGACTGTTGTTCCAATGACATTCACAAGCTAGATACCA < 41bp 1 0.748878906758467 1 0.149322360754013 experiment 0.502242186483067 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985902 chr6:42985893 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_26522 0 0 1 2 42985883 42985893 mRNA hsa-miR-132 KLHDC3 miRanda miRanda
14034 chr11 607281 607281 1 + G A BLCA 607300 + 607280 607320 41 TGGGGCGGTTCAGGCTCGGAACTTGTCAAATGGGAGTGTGC TAGGGCGGTTCAGGCTCGGAACTTGTCAAATGGGAGTGTGC < 41bp 1 0.754977651985114 1 0.949301779270172 experiment 0.490044696029772 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 2 PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607300 chr11:607281 nonsynonymous SNV 0.007 1 hm6A_associated_SNPs_26535 0 0 1 1 607278 607299 mRNA hsa-miR-615-3p PHRF1 miRanda miRanda
14034 chr1 53236924 53236924 1 + G A BLCA 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTAAATTCATTAACTCTCTCCCTCGAGGATCCT < 41bp 1 0.6730908240656 1 0.919045269489288 experiment 0.6538183518688 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236924 synonymous SNV . 0 hm6A_associated_SNPs_26558 0 0 1 4 53236903 53236924 mRNA hsa-miR-29a ZYG11B miRanda miRanda
14034 chr1 53236924 53236924 1 + G A BLCA 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTAAATTCATTAACTCTCTCCCTCGAGGATCCT < 41bp 1 0.6730908240656 1 0.919045269489288 experiment 0.6538183518688 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236924 synonymous SNV . 0 hm6A_associated_SNPs_26558 0 0 1 4 53236902 53236924 mRNA hsa-miR-29b ZYG11B miRanda miRanda
14034 chr1 53236924 53236924 1 + G A BLCA 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTAAATTCATTAACTCTCTCCCTCGAGGATCCT < 41bp 1 0.6730908240656 1 0.919045269489288 experiment 0.6538183518688 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236924 synonymous SNV . 0 hm6A_associated_SNPs_26558 0 0 1 4 53236920 53236943 mRNA hsa-miR-185 ZYG11B miRanda miRanda
14034 chr1 53236924 53236924 1 + G A BLCA 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTAAATTCATTAACTCTCTCCCTCGAGGATCCT < 41bp 1 0.6730908240656 1 0.919045269489288 experiment 0.6538183518688 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236924 synonymous SNV . 0 hm6A_associated_SNPs_26558 0 0 1 4 53236903 53236924 mRNA hsa-miR-29c ZYG11B miRanda miRanda
14034 chr3 158537505 158537505 1 + G A BLCA 158537523 + 158537503 158537543 41 GAGAGAATCCTTCATAAAGAACAAGGAAAAACAGGTAAGTC GAAAGAATCCTTCATAAAGAACAAGGAAAAACAGGTAAGTC < 41bp 1 0.657095317995008 1 0.903355836868286 experiment 0.685809364009985 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158537523 chr3:158537505 synonymous SNV . 0 hm6A_associated_SNPs_26564 0 0 1 1 158537491 158537513 mRNA hsa-miR-876-5p MFSD1 miRanda miRanda
14034 chr1 28818294 28818294 1 + G A BLCA 28818295 + 28818275 28818315 41 GACCAAACTGACCCCTGCTGACAAGGTACCTGGAAAGCACT GACCAAACTGACCCCTGCTAACAAGGTACCTGGAAAGCACT < 41bp 1 0.520156655768041 1 0.65786474943161 experiment 0.959686688463918 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28818295 chr1:28818294 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_26571 0 0 1 1 28818273 28818295 mRNA hsa-miR-214 PHACTR4 miRanda miRanda
14034 chr8 110567076 110567076 1 + A G BLCA 110567073 + 110567053 110567093 41 TTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACAC TTTGGAACAACTGGAACCTGACTGTTTTAAGGACATGACAC < 41bp 1 0.428388673468758 1 0.720502376556396 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110567073 chr8:110567076 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_26601 0 0 1 1 110567076 110567096 mRNA hsa-miR-599 EBAG9 miRanda miRanda
14034 chr1 203276489 203276489 1 + C T BLCA 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGTTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.613532797562233 1 0.996368408203125 experiment 0.772934404875535 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276489 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_26603 0 0 1 1 203276477 203276500 mRNA hsa-miR-125a-3p BTG2 miRanda miRanda
14034 chr4 524279 524279 1 + G A BLCA 524290 + 524270 524310 41 TCTGTTCACGGGCACCAAAGACTTACTTAAATCTCAAGTCA TCTGTTCACAGGCACCAAAGACTTACTTAAATCTCAAGTCA < 41bp 1 0.714625890848116 1 0.926626265048981 experiment 0.570748218303767 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 PIGG ENSG00000174227 CDS Human protein_coding chr4:524290 chr4:524279 synonymous SNV . 0 hm6A_associated_SNPs_26615 0 0 1 2 524266 524290 mRNA hsa-miR-9 PIGG miRanda miRanda
14034 chr4 524279 524279 1 + G A BLCA 524290 + 524270 524310 41 TCTGTTCACGGGCACCAAAGACTTACTTAAATCTCAAGTCA TCTGTTCACAGGCACCAAAGACTTACTTAAATCTCAAGTCA < 41bp 1 0.714625890848116 1 0.926626265048981 experiment 0.570748218303767 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 PIGG ENSG00000174227 CDS Human protein_coding chr4:524290 chr4:524279 synonymous SNV . 0 hm6A_associated_SNPs_26615 0 0 1 2 524257 524279 mRNA hsa-miR-542-3p PIGG miRanda miRanda
14034 chr17 73045345 73045345 1 + G T BLCA 73045340 + 73045320 73045360 41 GACAGGAGCCTATCTGATTGACAGGGACCCCACCTACTTTG GACAGGAGCCTATCTGATTGACAGGTACCCCACCTACTTTG < 41bp 1 0.407233897791466 1 0.124081194400787 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73045340 chr17:73045345 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_26621 0 0 1 1 73045322 73045346 mRNA hsa-miR-339-5p KCTD2 miRanda miRanda
14034 chr6 3137618 3137618 1 + G A BLCA 3137628 + 3137608 3137648 41 TTTCCAAATGGAGTGAGAGAACAAGAAAGCCTCTAGAAGCC TTTCCAAATGAAGTGAGAGAACAAGAAAGCCTCTAGAAGCC < 41bp 1 0.754572641551218 1 0.0774003863334656 experiment 0.490854716897563 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 11 BPHL ENSG00000137274 CDS Human protein_coding chr6:3137628 chr6:3137618 stopgain 0.998 1 hm6A_associated_SNPs_26634 0 0 1 1 3137599 3137621 mRNA hsa-miR-136 BPHL miRanda miRanda
14034 chr2 190719275 190719275 1 + C G BLCA 190719278 + 190719258 190719298 41 TTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGA TTGTAGTAGTGAAATTTGTAACATTGATAAAAACACTAAGA < 41bp 1 0.719502021374825 1 0.974781274795532 experiment 0.56099595725035 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190719278 chr2:190719275 nonsynonymous SNV 0.254 1 hm6A_associated_SNPs_26635 0 0 1 1 190719261 190719281 mRNA hsa-miR-653 PMS1 miRanda miRanda
14034 chr11 764430 764430 1 + G A BLCA 764431 + 764411 764451 41 TGAAGCTGGAGCGGATGCTGACAGTGAGTGTTGTGTGTGGG TGAAGCTGGAGCGGATGCTAACAGTGAGTGTTGTGTGTGGG < 41bp 1 0.471526582332282 1 0.955205321311951 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 20 TALDO1 ENSG00000177156 CDS Human protein_coding chr11:764431 chr11:764430 synonymous SNV . 0 hm6A_associated_SNPs_26652 0 0 1 1 764422 764433 mRNA hsa-miR-543 TALDO1 miRanda miRanda
14034 chr11 65272480 65272480 1 + G A BLCA 65272487 + 65272467 65272507 41 CAGTGGACAAAATGAGGAAAACAGGTGAACAAGCTTTTTCT CAGTGGACAAAATAAGGAAAACAGGTGAACAAGCTTTTTCT < 41bp 1 0.088041901352179 1 0.781000137329102 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272487 chr11:65272480 . . 0 hm6A_associated_SNPs_26667 0 0 1 1 65272467 65272486 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr11 65272480 65272480 1 + G A BLCA 65272495 + 65272475 65272515 41 AAAATGAGGAAAACAGGTGAACAAGCTTTTTCTGTATTTAC AAAATAAGGAAAACAGGTGAACAAGCTTTTTCTGTATTTAC < 41bp 1 0.156361698406041 1 0.849276065826416 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272495 chr11:65272480 . . 0 hm6A_associated_SNPs_26668 0 0 1 1 65272467 65272486 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr5 162945242 162945242 1 + C T BLCA 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGTTCAGCTTGACTGCTCCAAATTGGAGACCT < 41bp 1 0.68387930302041 1 0.945418179035187 experiment 0.63224139395918 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945242 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_26669 0 0 1 1 162945235 162945257 mRNA hsa-miR-497 MAT2B miRanda miRanda
14034 chr10 72636365 72636365 1 + C T BLCA 72636360 + 72636340 72636380 41 AGCTATACAATTCCTAAAGGACATTCGAGAATCTGTCACTC AGCTATACAATTCCTAAAGGACATTTGAGAATCTGTCACTC < 41bp 1 0.796388514489031 1 0.925988674163818 experiment 0.407222971021938 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72636360 chr10:72636365 stopgain 0.825 1 hm6A_associated_SNPs_26680 1 0 1 1 72636358 72636379 mRNA hsa-miR-542-3p SGPL1 miRanda miRanda
14034 chr17 29061933 29061933 1 + G C BLCA 29061944 + 29061924 29061964 41 AGATCTATAGATTTCTTTGAACTCGGAATCTCATAGCAGTA AGATCTATACATTTCTTTGAACTCGGAATCTCATAGCAGTA < 41bp 1 0.0817025328923242 1 0.738987267017365 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29061944 chr17:29061933 . . 0 hm6A_associated_SNPs_26688 0 0 1 1 29061930 29061951 mRNA hsa-miR-145 SUZ12P miRanda miRanda
14034 chr20 29632710 29632710 1 + G C BLCA 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACCCTTCTGGACAGGTAGCTATTTATTTACT < 41bp 1 0.328275852158748 1 0.00357416272163391 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 13 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632710 synonymous SNV . 0 hm6A_associated_SNPs_26700 0 0 0 2 29632710 29632721 mRNA hsa-miR-378 FRG1B miRanda miRanda
14034 chr20 29632710 29632710 1 + G C BLCA 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACCCTTCTGGACAGGTAGCTATTTATTTACT < 41bp 1 0.328275852158748 1 0.00357416272163391 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 13 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632710 synonymous SNV . 0 hm6A_associated_SNPs_26700 0 0 0 2 29632709 29632721 mRNA hsa-miR-422a FRG1B miRanda miRanda
14034 chr3 186503753 186503753 1 + G A BLCA 186503764 + 186503744 186503784 41 GTTCGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA GTTCGAAATAAAATGCAAAAACTGCAGGCTGAAGCACCACA < 41bp 1 0.352308769379853 1 0.919311583042145 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 10 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503764 chr3:186503753 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_26727 0 0 1 1 186503745 186503765 mRNA hsa-miR-129-5p EIF4A2 miRanda miRanda
14034 chr15 92671633 92671633 1 + G A BLCA 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATAACTGTAAATGCCAAACCGATT < 41bp 1 0.326796097382656 1 0.910021662712097 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671633 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_26748 0 0 1 3 92671615 92671635 mRNA hsa-miR-27a SLCO3A1 miRanda miRanda
14034 chr15 92671633 92671633 1 + G A BLCA 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATAACTGTAAATGCCAAACCGATT < 41bp 1 0.326796097382656 1 0.910021662712097 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671633 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_26748 0 0 1 3 92671615 92671635 mRNA hsa-miR-27b SLCO3A1 miRanda miRanda
14034 chr15 92671633 92671633 1 + G A BLCA 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATAACTGTAAATGCCAAACCGATT < 41bp 1 0.326796097382656 1 0.910021662712097 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671633 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_26748 0 0 1 3 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr20 29625955 29625955 1 + A T BLCA 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGGACCATGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.644918003779912 1 0.540665149688721 experiment 0.710163992440176 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625955 stopgain 0.986 1 hm6A_associated_SNPs_26753 0 0 0 2 29625935 29625956 mRNA hsa-miR-133a FRG1B miRanda miRanda
14034 chr20 29625955 29625955 1 + A T BLCA 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGGACCATGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.644918003779912 1 0.540665149688721 experiment 0.710163992440176 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625955 stopgain 0.986 1 hm6A_associated_SNPs_26753 0 0 0 2 29625935 29625956 mRNA hsa-miR-133b FRG1B miRanda miRanda
14034 chrX 41204495 41204495 1 + G A BLCA 41204505 + 41204485 41204525 41 CAGATTCGTAGAATAGTCGAACAAGATACTATGCCTCCAAA CAGATTCGTAAAATAGTCGAACAAGATACTATGCCTCCAAA < 41bp 1 0.642954379366736 1 0.395791113376617 experiment 0.714091241266528 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41204505 chrX:41204495 nonsynonymous SNV 0.916 2 hm6A_associated_SNPs_26803 0 0 1 1 41204486 41204509 mRNA hsa-miR-375 DDX3X miRanda miRanda
14034 chr3 128629634 128629634 1 + C T BLCA 128629651 + 128629631 128629671 41 CTTCAGCCTCTCTCAGCTGGACAAGTGTGAGTGGCATGTCT CTTTAGCCTCTCTCAGCTGGACAAGTGTGAGTGGCATGTCT < 41bp 1 0.484597482692055 1 0.242618530988693 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128629651 chr3:128629634 synonymous SNV 0.885 0 hm6A_associated_SNPs_26820 0 0 1 1 128629621 128629641 mRNA hsa-miR-485-5p ACAD9 miRanda miRanda
14034 chr10 1046670 1046670 1 + C T BLCA 1046663 + 1046643 1046683 41 CCACCCTCTGGAGGATAGGAACACCATCGAGATGCAGGCCA CCACCCTCTGGAGGATAGGAACACCATTGAGATGCAGGCCA < 41bp 1 0.714458122993602 1 0.00355333089828491 experiment 0.571083754012796 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1046663 chr10:1046670 synonymous SNV . 0 hm6A_associated_SNPs_26881 0 0 1 1 1046669 1046692 mRNA hsa-miR-34c-5p GTPBP4 miRanda miRanda
14034 chr8 48320493 48320493 1 + C T BLCA 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATTAATGTATTTCTTACCA < 41bp 1 0.335183792027267 1 0.0481334328651428 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320493 stopgain 0.964 1 hm6A_associated_SNPs_26886 0 0 1 2 48320493 48320513 mRNA hsa-miR-9 KIAA0146 miRanda miRanda
14034 chr8 48320493 48320493 1 + C T BLCA 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATTAATGTATTTCTTACCA < 41bp 1 0.335183792027267 1 0.0481334328651428 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320493 stopgain 0.964 1 hm6A_associated_SNPs_26886 0 0 1 2 48320487 48320506 mRNA hsa-miR-539 KIAA0146 miRanda miRanda
14034 chr11 65267925 65267925 1 + C A BLCA 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCAA < 41bp 1 0.196838869823915 1 0.980565667152405 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267925 . . 0 hm6A_associated_SNPs_26917 0 0 1 2 65267916 65267939 lncRNA hsa-miR-141-3p MALAT1 miRanda starBase2
14034 chr11 65267925 65267925 1 + C A BLCA 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCAA < 41bp 1 0.196838869823915 1 0.980565667152405 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267925 . . 0 hm6A_associated_SNPs_26917 0 0 1 2 65267915 65267939 lncRNA hsa-miR-200a-3p MALAT1 miRanda starBase2
14034 chr11 65267925 65267925 1 + C A BLCA 65267916 + 65267896 65267936 41 ATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTG ATCTAGGAAGACAGCAGCAGACAGGATTCAAGGAACCAGTG < 41bp 1 0.211712366388085 1 0.991036653518677 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267916 chr11:65267925 . . 0 hm6A_associated_SNPs_26918 0 0 1 2 65267916 65267939 lncRNA hsa-miR-141-3p MALAT1 miRanda starBase2
14034 chr11 65267925 65267925 1 + C A BLCA 65267916 + 65267896 65267936 41 ATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTG ATCTAGGAAGACAGCAGCAGACAGGATTCAAGGAACCAGTG < 41bp 1 0.211712366388085 1 0.991036653518677 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 30 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267916 chr11:65267925 . . 0 hm6A_associated_SNPs_26918 0 0 1 2 65267915 65267939 lncRNA hsa-miR-200a-3p MALAT1 miRanda starBase2
14034 chr11 65267925 65267925 1 + C A BLCA 65267930 + 65267910 65267950 41 CAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAG CAGCAGACAGGATTCAAGGAACCAGTGTTTGATGAAGCTAG < 41bp 1 0.0407618322922499 1 0.988813638687134 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267930 chr11:65267925 . . 0 hm6A_associated_SNPs_26919 0 0 1 2 65267916 65267939 lncRNA hsa-miR-141-3p MALAT1 miRanda starBase2
14034 chr11 65267925 65267925 1 + C A BLCA 65267930 + 65267910 65267950 41 CAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAG CAGCAGACAGGATTCAAGGAACCAGTGTTTGATGAAGCTAG < 41bp 1 0.0407618322922499 1 0.988813638687134 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267930 chr11:65267925 . . 0 hm6A_associated_SNPs_26919 0 0 1 2 65267915 65267939 lncRNA hsa-miR-200a-3p MALAT1 miRanda starBase2
14034 chr20 279262 279262 1 + G C BLCA 279254 + 279234 279274 41 GCTTTAAATGTGGTTCCCGGACCCACATGAGCGGCAGCTGC GCTTTAAATGTGGTTCCCGGACCCACATCAGCGGCAGCTGC < 41bp 1 0.693343045811966 1 0.996860027313232 experiment 0.613313908376068 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 ZCCHC3 ENSG00000177764 CDS Human other chr20:279254 chr20:279262 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_26950 0 0 1 2 279253 279273 mRNA hsa-miR-22 ZCCHC3 miRanda miRanda
14034 chr20 279262 279262 1 + G C BLCA 279254 + 279234 279274 41 GCTTTAAATGTGGTTCCCGGACCCACATGAGCGGCAGCTGC GCTTTAAATGTGGTTCCCGGACCCACATCAGCGGCAGCTGC < 41bp 1 0.693343045811966 1 0.996860027313232 experiment 0.613313908376068 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 ZCCHC3 ENSG00000177764 CDS Human other chr20:279254 chr20:279262 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_26950 0 0 1 2 279241 279262 mRNA hsa-miR-299-3p ZCCHC3 miRanda miRanda
14034 chr6 147684703 147684703 1 + C T BLCA 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AATTTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.142400219221292 1 0.929756879806519 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684703 synonymous SNV . 0 hm6A_associated_SNPs_26975 0 0 1 4 147684691 147684712 mRNA hsa-miR-34a STXBP5 miRanda miRanda
14034 chr6 147684703 147684703 1 + C T BLCA 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AATTTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.142400219221292 1 0.929756879806519 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684703 synonymous SNV . 0 hm6A_associated_SNPs_26975 0 0 1 4 147684691 147684712 mRNA hsa-miR-34c-5p STXBP5 miRanda miRanda
14034 chr6 147684703 147684703 1 + C T BLCA 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AATTTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.142400219221292 1 0.929756879806519 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684703 synonymous SNV . 0 hm6A_associated_SNPs_26975 0 0 1 4 147684688 147684712 mRNA hsa-miR-449a STXBP5 miRanda miRanda
14034 chr6 147684703 147684703 1 + C T BLCA 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AATTTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.142400219221292 1 0.929756879806519 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 4 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684703 synonymous SNV . 0 hm6A_associated_SNPs_26975 0 0 1 4 147684688 147684712 mRNA hsa-miR-449b STXBP5 miRanda miRanda
14034 chr6 42652567 42652567 1 + C T BLCA 42652549 + 42652529 42652569 41 CAGATATCCAAGAGAATCTAACAAATTAATAAACCTTCCAG CAGATATCCAAGAGAATCTAACAAATTAATAAACCTTCTAG < 41bp 1 0.6907580171469 1 0.000765174627304077 experiment 0.6184839657062 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42652549 chr6:42652567 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_26989 0 0 1 1 42652567 42652587 mRNA hsa-miR-485-5p UBR2 miRanda miRanda
14034 chr2 153591569 153591569 1 + G C BRCA 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCAGCTTTTCTTGCACAGTGACTTACTTTGATTCT Direct Loss 1 0.670780130153346 1 0.202324151992798 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591569 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27049 0 0 1 3 153591566 153591587 mRNA hsa-miR-26b ARL6IP6 miRanda miRanda
14034 chr2 153591569 153591569 1 + G C BRCA 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCAGCTTTTCTTGCACAGTGACTTACTTTGATTCT Direct Loss 1 0.670780130153346 1 0.202324151992798 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591569 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27049 0 0 1 3 153591561 153591580 mRNA hsa-miR-224 ARL6IP6 miRanda miRanda
14034 chr2 153591569 153591569 1 + G C BRCA 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCAGCTTTTCTTGCACAGTGACTTACTTTGATTCT Direct Loss 1 0.670780130153346 1 0.202324151992798 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591569 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27049 0 0 1 3 153591553 153591576 mRNA hsa-miR-339-5p ARL6IP6 miRanda miRanda
14034 chr2 153591569 153591569 1 + G C BRCA 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCAGCTTTTCTTGCACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.377020943462245 1 0.273040771484375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591569 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27050 0 0 1 3 153591566 153591587 mRNA hsa-miR-26b ARL6IP6 miRanda miRanda
14034 chr2 153591569 153591569 1 + G C BRCA 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCAGCTTTTCTTGCACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.377020943462245 1 0.273040771484375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591569 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27050 0 0 1 3 153591561 153591580 mRNA hsa-miR-224 ARL6IP6 miRanda miRanda
14034 chr2 153591569 153591569 1 + G C BRCA 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCAGCTTTTCTTGCACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.377020943462245 1 0.273040771484375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591569 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27050 0 0 1 3 153591553 153591576 mRNA hsa-miR-339-5p ARL6IP6 miRanda miRanda
14034 chr21 30699316 30699316 1 + C T BRCA 30699330 + 30699310 30699350 41 GTGGAGCGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG GTGGAGTGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG < 41bp 1 0.784347471519893 1 0.870393455028534 experiment 0.431305056960214 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699330 chr21:30699316 stopgain 0.976 1 hm6A_associated_SNPs_27070 0 0 1 2 30699316 30699339 mRNA hsa-miR-138 BACH1 miRanda miRanda
14034 chr21 30699316 30699316 1 + C T BRCA 30699330 + 30699310 30699350 41 GTGGAGCGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG GTGGAGTGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG < 41bp 1 0.784347471519893 1 0.870393455028534 experiment 0.431305056960214 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699330 chr21:30699316 stopgain 0.976 1 hm6A_associated_SNPs_27070 0 0 1 2 30699309 30699331 mRNA hsa-miR-544 BACH1 miRanda miRanda
14034 chr4 79780777 79780777 1 + T C BRCA 79780763 + 79780743 79780783 41 ATGCTTGAACCAGATCCGGAACATAGACCTGATATATTTCA ATGCTTGAACCAGATCCGGAACATAGACCTGATACATTTCA < 41bp 1 0.52474823430713 1 0.256412476301193 experiment 0.95050353138574 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 BMP2K ENSG00000138756 CDS Human protein_coding chr4:79780763 chr4:79780777 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27084 0 0 1 3 79780770 79780792 mRNA hsa-miR-183 BMP2K miRanda miRanda
14034 chr4 79780777 79780777 1 + T C BRCA 79780763 + 79780743 79780783 41 ATGCTTGAACCAGATCCGGAACATAGACCTGATATATTTCA ATGCTTGAACCAGATCCGGAACATAGACCTGATACATTTCA < 41bp 1 0.52474823430713 1 0.256412476301193 experiment 0.95050353138574 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 BMP2K ENSG00000138756 CDS Human protein_coding chr4:79780763 chr4:79780777 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27084 0 0 1 3 79780756 79780777 mRNA hsa-miR-361-5p BMP2K miRanda miRanda
14034 chr4 79780777 79780777 1 + T C BRCA 79780763 + 79780743 79780783 41 ATGCTTGAACCAGATCCGGAACATAGACCTGATATATTTCA ATGCTTGAACCAGATCCGGAACATAGACCTGATACATTTCA < 41bp 1 0.52474823430713 1 0.256412476301193 experiment 0.95050353138574 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 BMP2K ENSG00000138756 CDS Human protein_coding chr4:79780763 chr4:79780777 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27084 0 0 1 3 79780770 79780792 mRNA hsa-miR-425 BMP2K miRanda miRanda
14034 chr14 60592455 60592455 1 + A C BRCA 60592447 + 60592427 60592467 41 CCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTAT CCTTGAAGAATATGAACGTGACTGGTACCTTGGTTTGGTAT < 41bp 1 0.235505349634192 1 0.903452217578888 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 29 PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60592447 chr14:60592455 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27094 0 0 1 1 60592452 60592475 mRNA hsa-miR-376b C14orf135 miRanda miRanda
14034 chr17 42744064 42744064 1 + A C BRCA 42744051 + 42744031 42744071 41 AGACAAATGATACAGCTAAGACAACATTCCAAGAATATCCA AGACAAATGATACAGCTAAGACAACATTCCAAGCATATCCA < 41bp 1 0.771826425032909 1 0.924293160438538 experiment 0.456347149934182 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744051 chr17:42744064 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_27101 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr17 42744064 42744064 1 + A C BRCA 42744082 + 42744062 42744102 41 AGAATATCCACTTATCAAAAACTGTTTTACACCCCAAACTG AGCATATCCACTTATCAAAAACTGTTTTACACCCCAAACTG < 41bp 1 0.620005741444745 1 0.941705703735352 experiment 0.75998851711051 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744082 chr17:42744064 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_27102 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr17 74729124 74729124 1 + C G BRCA 74729137 + 74729117 74729157 41 ATACTGTCAGACAGCTCAGAACTGCCTCACTGTCTGGAAGT ATACTGTGAGACAGCTCAGAACTGCCTCACTGTCTGGAAGT < 41bp 1 0.581566733388868 1 0.765156984329224 experiment 0.836866533222264 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 METTL23 ENSG00000181038;ENSG00000267168 CDS Human other chr17:74729137 chr17:74729124 stopgain 0.637 1 hm6A_associated_SNPs_27105 0 0 1 1 74729105 74729124 mRNA hsa-miR-144 C17orf95 miRanda miRanda
14034 chr1 231488731 231488731 1 + C G BRCA 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTCTGTTCTAGTTCTC < 41bp 1 0.612835665636555 1 0.70187896490097 experiment 0.774328668726891 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488731 nonsynonymous SNV 0.005 2 hm6A_associated_SNPs_27108 0 0 1 2 231488721 231488743 mRNA hsa-miR-146a C1orf124 miRanda miRanda
14034 chr1 231488731 231488731 1 + C G BRCA 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTCTGTTCTAGTTCTC < 41bp 1 0.612835665636555 1 0.70187896490097 experiment 0.774328668726891 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 30 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488731 nonsynonymous SNV 0.005 2 hm6A_associated_SNPs_27108 0 0 1 2 231488721 231488743 mRNA hsa-miR-146b-5p C1orf124 miRanda miRanda
14034 chr1 222906001 222906001 1 + C A BRCA 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACATGTGAAAGAACCAGACATCAAACCTCAAAAGGACA < 41bp 1 0.776351806636687 1 0.837860226631165 experiment 0.447296386726625 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906001 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_27111 0 0 1 2 222905998 222906007 mRNA hsa-miR-27a C1orf58 miRanda miRanda
14034 chr1 222906001 222906001 1 + C A BRCA 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACATGTGAAAGAACCAGACATCAAACCTCAAAAGGACA < 41bp 1 0.776351806636687 1 0.837860226631165 experiment 0.447296386726625 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906001 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_27111 0 0 1 2 222905998 222906007 mRNA hsa-miR-27b C1orf58 miRanda miRanda
14034 chr5 96101008 96101008 1 + A G BRCA 96101004 + 96100984 96101024 41 GCAGCCTGACCCAGATGAGAACAAACCAATGGAAGATAAAG GCAGCCTGACCCAGATGAGAACAAGCCAATGGAAGATAAAG < 41bp 1 0.572629337755819 1 0.940059781074524 experiment 0.854741324488362 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 25 CAST ENSG00000153113 CDS Human protein_coding chr5:96101004 chr5:96101008 synonymous SNV . 0 hm6A_associated_SNPs_27139 0 0 1 1 96100995 96101018 mRNA hsa-miR-136 CAST miRanda miRanda
14034 chr2 197521850 197521850 1 + C T BRCA 197521855 + 197521835 197521875 41 CTCTGAAGATTGCCTCGCAGACAAAGGTTTGAGTCTAAGAG CTCTGAAGATTGCCTTGCAGACAAAGGTTTGAGTCTAAGAG < 41bp 1 0.236543014564829 1 0.973233222961426 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 16 CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197521855 chr2:197521850 nonsynonymous SNV 0.912 1 hm6A_associated_SNPs_27144 0 0 1 1 197521835 197521857 mRNA hsa-miR-346 CCDC150 miRanda miRanda
14034 chr17 61662631 61662631 1 + G A BRCA 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTGTCGCCAGGTTAAACAACCATCAAGCATGTGTCA < 41bp 1 0.77616642801218 1 0.00637847185134888 experiment 0.44766714397564 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662631 nonsynonymous SNV 0.993 2 hm6A_associated_SNPs_27220 0 0 1 2 61662624 61662645 mRNA hsa-miR-25 DCAF7 miRanda miRanda
14034 chr17 61662631 61662631 1 + G A BRCA 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTGTCGCCAGGTTAAACAACCATCAAGCATGTGTCA < 41bp 1 0.77616642801218 1 0.00637847185134888 experiment 0.44766714397564 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662631 nonsynonymous SNV 0.993 2 hm6A_associated_SNPs_27220 0 0 1 2 61662623 61662645 mRNA hsa-miR-367 DCAF7 miRanda miRanda
14034 chr14 24113663 24113663 1 + A G BRCA 24113645 + 24113625 24113665 41 GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCACT GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCGCT < 41bp 1 0.338652639749792 1 0.00454500317573547 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113645 chr14:24113663 nonsynonymous SNV 0.053 1 hm6A_associated_SNPs_27223 0 0 1 3 24113653 24113676 mRNA hsa-miR-199a-5p DHRS2 miRanda miRanda
14034 chr14 24113663 24113663 1 + A G BRCA 24113645 + 24113625 24113665 41 GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCACT GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCGCT < 41bp 1 0.338652639749792 1 0.00454500317573547 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113645 chr14:24113663 nonsynonymous SNV 0.053 1 hm6A_associated_SNPs_27223 0 0 1 3 24113653 24113676 mRNA hsa-miR-199b-5p DHRS2 miRanda miRanda
14034 chr14 24113663 24113663 1 + A G BRCA 24113645 + 24113625 24113665 41 GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCACT GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCGCT < 41bp 1 0.338652639749792 1 0.00454500317573547 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113645 chr14:24113663 nonsynonymous SNV 0.053 1 hm6A_associated_SNPs_27223 0 0 1 3 24113645 24113666 mRNA hsa-miR-411 DHRS2 miRanda miRanda
14034 chr5 118582789 118582789 1 + G C BRCA 118582771 + 118582751 118582791 41 CCATTTTTAGAAATATTGGAACTGGAGTGATGCAAATTGAG CCATTTTTAGAAATATTGGAACTGGAGTGATGCAAATTCAG < 41bp 1 0.642932118888773 1 0.865448474884033 experiment 0.714135762222454 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118582771 chr5:118582789 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_27227 0 0 1 1 118582776 118582798 mRNA hsa-miR-339-5p DMXL1 miRanda miRanda
14034 chr3 10334482 10334482 1 + C A BRCA 10334481 + 10334461 10334501 41 CCCCAAACAGAAAAATCCTAACTGTGGTGACCAGGTACCTC CCCCAAACAGAAAAATCCTAAATGTGGTGACCAGGTACCTC Direct Loss 1 0.102236096971359 1 0.929574549198151 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 22 GHRLOS ENSG00000240288 ncRNA_exonic Human antisense chr3:10334481 chr3:10334482 . . 0 hm6A_associated_SNPs_27318 0 0 1 1 10334470 10334491 mRNA hsa-miR-197 GHRLOS miRanda miRanda
14034 chr13 28001286 28001286 1 + C G BRCA 28001278 + 28001258 28001298 41 TGGCAAGGCCTTCATCAGGGACTACCATCTGAGCCGCCACA TGGCAAGGCCTTCATCAGGGACTACCATGTGAGCCGCCACA < 41bp 1 0.791782014658962 1 0.666447401046753 experiment 0.416435970682076 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28001278 chr13:28001286 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_27339 0 0 1 2 28001272 28001293 mRNA hsa-miR-24 GTF3A miRanda miRanda
14034 chr13 28001286 28001286 1 + C G BRCA 28001278 + 28001258 28001298 41 TGGCAAGGCCTTCATCAGGGACTACCATCTGAGCCGCCACA TGGCAAGGCCTTCATCAGGGACTACCATGTGAGCCGCCACA < 41bp 1 0.791782014658962 1 0.666447401046753 experiment 0.416435970682076 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28001278 chr13:28001286 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_27339 0 0 1 2 28001286 28001308 mRNA hsa-miR-383 GTF3A miRanda miRanda
14034 chr13 28001286 28001286 1 + C G BRCA 28001304 + 28001284 28001324 41 ATCTGAGCCGCCACATTCTGACTCACACAGGAGAAAAGCCG ATGTGAGCCGCCACATTCTGACTCACACAGGAGAAAAGCCG < 41bp 1 0.296058645978105 1 0.0727308988571167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28001304 chr13:28001286 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_27340 0 0 1 2 28001272 28001293 mRNA hsa-miR-24 GTF3A miRanda miRanda
14034 chr13 28001286 28001286 1 + C G BRCA 28001304 + 28001284 28001324 41 ATCTGAGCCGCCACATTCTGACTCACACAGGAGAAAAGCCG ATGTGAGCCGCCACATTCTGACTCACACAGGAGAAAAGCCG < 41bp 1 0.296058645978105 1 0.0727308988571167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28001304 chr13:28001286 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_27340 0 0 1 2 28001286 28001308 mRNA hsa-miR-383 GTF3A miRanda miRanda
14034 chr1 60294515 60294515 1 + G C BRCA 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGATGTTGGGGACAACTGCAGAATAAAGGTAT < 41bp 1 0.523541285931679 1 0.0960087180137634 experiment 0.952917428136642 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294515 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_27359 0 0 1 3 60294492 60294516 mRNA hsa-miR-199a-5p HOOK1 miRanda miRanda
14034 chr1 60294515 60294515 1 + G C BRCA 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGATGTTGGGGACAACTGCAGAATAAAGGTAT < 41bp 1 0.523541285931679 1 0.0960087180137634 experiment 0.952917428136642 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294515 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_27359 0 0 1 3 60294510 60294524 mRNA hsa-miR-193a-3p HOOK1 miRanda miRanda
14034 chr1 60294515 60294515 1 + G C BRCA 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGATGTTGGGGACAACTGCAGAATAAAGGTAT < 41bp 1 0.523541285931679 1 0.0960087180137634 experiment 0.952917428136642 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294515 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_27359 0 0 1 3 60294510 60294524 mRNA hsa-miR-193b HOOK1 miRanda miRanda
14034 chr20 42275617 42275617 1 + T C BRCA 42275613 + 42275593 42275633 41 AAGTGAAACAGCATTCCAGAACAATTTCTGAAGACCATGCC AAGTGAAACAGCATTCCAGAACAACTTCTGAAGACCATGCC < 41bp 1 0.699626924222854 1 0.754673838615417 experiment 0.600746151554292 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 IFT52 ENSG00000101052 CDS Human protein_coding chr20:42275613 chr20:42275617 synonymous SNV . 0 hm6A_associated_SNPs_27378 0 0 1 1 42275614 42275636 mRNA hsa-miR-485-5p IFT52 miRanda miRanda
14034 chr1 154437823 154437823 1 + C G BRCA 154437822 + 154437802 154437842 41 GGACCCACGGAGCCCTTATGACATCAGCAATACAGACTACT GGACCCACGGAGCCCTTATGAGATCAGCAATACAGACTACT Direct Loss 1 0.787407591142304 1 0.994306743144989 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 IL6R ENSG00000160712 CDS Human protein_coding chr1:154437822 chr1:154437823 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_27387 0 0 0 1 154437811 154437834 mRNA hsa-miR-137 IL6R miRanda miRanda
14034 chr16 71961713 71961713 1 + A G BRCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACGTAGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.787803661450534 1 0.896859884262085 experiment 0.424392677098932 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961713 synonymous SNV . 0 hm6A_associated_SNPs_27406 0 0 1 4 71961701 71961721 mRNA hsa-miR-192 KIAA0174 miRanda miRanda
14034 chr16 71961713 71961713 1 + A G BRCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACGTAGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.787803661450534 1 0.896859884262085 experiment 0.424392677098932 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961713 synonymous SNV . 0 hm6A_associated_SNPs_27406 0 0 1 4 71961703 71961721 mRNA hsa-miR-192 KIAA0174 miRanda miRanda
14034 chr16 71961713 71961713 1 + A G BRCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACGTAGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.787803661450534 1 0.896859884262085 experiment 0.424392677098932 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961713 synonymous SNV . 0 hm6A_associated_SNPs_27406 0 0 1 4 71961701 71961721 mRNA hsa-miR-215 KIAA0174 miRanda miRanda
14034 chr16 71961713 71961713 1 + A G BRCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACGTAGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.787803661450534 1 0.896859884262085 experiment 0.424392677098932 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 8 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961713 synonymous SNV . 0 hm6A_associated_SNPs_27406 0 0 1 4 71961703 71961721 mRNA hsa-miR-215 KIAA0174 miRanda miRanda
14034 chr11 1618885 1618885 1 + C T BRCA 1618878 + 1618858 1618898 41 AGGGAGGATGTGTGGGACGAACTGACTCAGGGAACCATAAG AGGGAGGATGTGTGGGACGAACTGACTTAGGGAACCATAAG < 41bp 1 0.168124929183719 1 0.978879451751709 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 KRTAP5-AS1 ENSG00000233930 ncRNA_exonic Human antisense chr11:1618878 chr11:1618885 . . 0 hm6A_associated_SNPs_27451 0 0 1 3 1618869 1618890 mRNA hsa-miR-125b LOC338651 miRanda miRanda
14034 chr11 1618885 1618885 1 + C T BRCA 1618878 + 1618858 1618898 41 AGGGAGGATGTGTGGGACGAACTGACTCAGGGAACCATAAG AGGGAGGATGTGTGGGACGAACTGACTTAGGGAACCATAAG < 41bp 1 0.168124929183719 1 0.978879451751709 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 KRTAP5-AS1 ENSG00000233930 ncRNA_exonic Human antisense chr11:1618878 chr11:1618885 . . 0 hm6A_associated_SNPs_27451 0 0 1 3 1618874 1618899 mRNA hsa-miR-9 LOC338651 miRanda miRanda
14034 chr11 1618885 1618885 1 + C T BRCA 1618878 + 1618858 1618898 41 AGGGAGGATGTGTGGGACGAACTGACTCAGGGAACCATAAG AGGGAGGATGTGTGGGACGAACTGACTTAGGGAACCATAAG < 41bp 1 0.168124929183719 1 0.978879451751709 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 KRTAP5-AS1 ENSG00000233930 ncRNA_exonic Human antisense chr11:1618878 chr11:1618885 . . 0 hm6A_associated_SNPs_27451 0 0 1 3 1618867 1618890 mRNA hsa-miR-125a-5p LOC338651 miRanda miRanda
14034 chr8 48875562 48875562 1 + G C BRCA 48875563 + 48875543 48875583 41 TGAACACATCAAATCATTTGACAAAAATTTGTACAGACAAC TGAACACATCAAATCATTTCACAAAAATTTGTACAGACAAC Direct Loss 1 0.623134215907083 1 0.398329734802246 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875563 chr8:48875562 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_27491 0 0 1 3 48875550 48875570 mRNA hsa-miR-129-5p MCM4 miRanda miRanda
14034 chr8 48875562 48875562 1 + G C BRCA 48875563 + 48875543 48875583 41 TGAACACATCAAATCATTTGACAAAAATTTGTACAGACAAC TGAACACATCAAATCATTTCACAAAAATTTGTACAGACAAC Direct Loss 1 0.623134215907083 1 0.398329734802246 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875563 chr8:48875562 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_27491 0 0 1 3 48875559 48875580 mRNA hsa-miR-486-5p MCM4 miRanda miRanda
14034 chr8 48875562 48875562 1 + G C BRCA 48875563 + 48875543 48875583 41 TGAACACATCAAATCATTTGACAAAAATTTGTACAGACAAC TGAACACATCAAATCATTTCACAAAAATTTGTACAGACAAC Direct Loss 1 0.623134215907083 1 0.398329734802246 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875563 chr8:48875562 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_27491 0 0 1 3 48875550 48875569 mRNA hsa-miR-599 MCM4 miRanda miRanda
14034 chr6 151247259 151247259 1 + G A BRCA 151247279 + 151247259 151247299 41 GACATTGAGATTTCAAGAGGACAAACTCCAAAAGCTGTGGA AACATTGAGATTTCAAGAGGACAAACTCCAAAAGCTGTGGA < 41bp 1 0.424586666316533 1 0.856363534927368 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151247279 chr6:151247259 nonsynonymous SNV 0.918 4 hm6A_associated_SNPs_27517 0 0 1 1 151247258 151247271 mRNA hsa-miR-216a MTHFD1L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916152 55916169 mRNA hsa-miR-10a NEDD4L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916152 55916169 mRNA hsa-miR-10b NEDD4L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916147 55916168 mRNA hsa-miR-203 NEDD4L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916136 55916157 mRNA hsa-miR-205 NEDD4L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916150 55916169 mRNA hsa-miR-125b NEDD4L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916148 55916169 mRNA hsa-miR-125a-5p NEDD4L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916151 55916169 mRNA hsa-miR-504 NEDD4L miRanda miRanda
14034 chr18 55916155 55916155 1 + G C BRCA 55916138 + 55916118 55916158 41 ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAAGAAT ATTTCTCTTCCAGACACTGAACCCAAAATGGAATGAACAAT < 41bp 1 0.0265212029102932 1 0.691452622413635 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55916138 chr18:55916155 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27540 0 0 1 8 55916137 55916158 mRNA hsa-miR-544 NEDD4L miRanda miRanda
14034 chr4 178274553 178274553 1 + C T BRCA 178274569 + 178274549 178274589 41 AAGTCAAGATCAACAGAAAAACTGCATTTGGAACTACAACT AAGTTAAGATCAACAGAAAAACTGCATTTGGAACTACAACT < 41bp 1 0.686874653573885 1 0.963255882263184 experiment 0.62625069285223 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 5 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274569 chr4:178274553 synonymous SNV . 0 hm6A_associated_SNPs_27542 0 0 1 1 178274544 178274564 mRNA hsa-miR-653 NEIL3 miRanda miRanda
14034 chr17 29667654 29667654 1 + C G BRCA 29667659 + 29667639 29667679 41 TAGTCTCCGTATATTCAATGACAAGGTAAGCAAACTTTGCC TAGTCTCCGTATATTGAATGACAAGGTAAGCAAACTTTGCC < 41bp 1 0.360994968688799 1 0.00109592080116272 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 NF1 ENSG00000196712 CDS Human protein_coding chr17:29667659 chr17:29667654 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27547 0 0 1 2 29667650 29667663 mRNA hsa-miR-378 NF1 miRanda miRanda
14034 chr17 29667654 29667654 1 + C G BRCA 29667659 + 29667639 29667679 41 TAGTCTCCGTATATTCAATGACAAGGTAAGCAAACTTTGCC TAGTCTCCGTATATTGAATGACAAGGTAAGCAAACTTTGCC < 41bp 1 0.360994968688799 1 0.00109592080116272 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 NF1 ENSG00000196712 CDS Human protein_coding chr17:29667659 chr17:29667654 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27547 0 0 1 2 29667649 29667663 mRNA hsa-miR-422a NF1 miRanda miRanda
14034 chr17 26495615 26495615 1 + G A BRCA 26495604 + 26495584 26495624 41 TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATGTA TCATTACAGCAATGCTATTGACATCTGGTCTATGGGATGTA < 41bp 1 0.673113770094937 1 0.067661464214325 experiment 0.653772459810127 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 32 NLK ENSG00000087095 CDS Human protein_coding chr17:26495604 chr17:26495615 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27556 0 0 1 2 26495602 26495624 mRNA hsa-miR-324-5p NLK miRanda miRanda
14034 chr17 26495615 26495615 1 + G A BRCA 26495604 + 26495584 26495624 41 TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATGTA TCATTACAGCAATGCTATTGACATCTGGTCTATGGGATGTA < 41bp 1 0.673113770094937 1 0.067661464214325 experiment 0.653772459810127 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 32 NLK ENSG00000087095 CDS Human protein_coding chr17:26495604 chr17:26495615 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27556 0 0 1 2 26495615 26495636 mRNA hsa-miR-544 NLK miRanda miRanda
14034 chr12 53853067 53853067 1 + C G BRCA 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGGTCTATGACCAATAGCACAGCTGCCAGT < 41bp 1 0.260020085271754 1 0.0425052344799042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853067 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_27594 0 0 1 3 53853059 53853082 mRNA hsa-miR-9 PCBP2 miRanda miRanda
14034 chr12 53853067 53853067 1 + C G BRCA 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGGTCTATGACCAATAGCACAGCTGCCAGT < 41bp 1 0.260020085271754 1 0.0425052344799042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853067 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_27594 0 0 1 3 53853056 53853075 mRNA hsa-miR-376a PCBP2 miRanda miRanda
14034 chr12 53853067 53853067 1 + C G BRCA 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGGTCTATGACCAATAGCACAGCTGCCAGT < 41bp 1 0.260020085271754 1 0.0425052344799042 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853067 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_27594 0 0 1 3 53853056 53853075 mRNA hsa-miR-376b PCBP2 miRanda miRanda
14034 chr6 137147511 137147511 1 + T G BRCA 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTGACTTGGAGTGAGAACAACGAACAGGTCCTCATCA < 41bp 1 0.757360243904137 1 0.0397302508354187 experiment 0.485279512191727 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147511 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_27610 0 0 0 2 137147505 137147526 mRNA hsa-miR-125a-3p PEX7 miRanda miRanda
14034 chr6 137147511 137147511 1 + T G BRCA 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTGACTTGGAGTGAGAACAACGAACAGGTCCTCATCA < 41bp 1 0.757360243904137 1 0.0397302508354187 experiment 0.485279512191727 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147511 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_27610 0 0 0 2 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chr6 137147511 137147511 1 + T G BRCA 137147508 + 137147488 137147528 41 ACTTGGAGTGAGAACAACGAACATGTCCTCATCACCTGTAG ACTTGGAGTGAGAACAACGAACAGGTCCTCATCACCTGTAG < 41bp 1 0.611557107398465 1 0.103077173233032 experiment 0.776885785203069 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 24 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147508 chr6:137147511 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_27611 0 0 0 2 137147505 137147526 mRNA hsa-miR-125a-3p PEX7 miRanda miRanda
14034 chr6 137147511 137147511 1 + T G BRCA 137147508 + 137147488 137147528 41 ACTTGGAGTGAGAACAACGAACATGTCCTCATCACCTGTAG ACTTGGAGTGAGAACAACGAACAGGTCCTCATCACCTGTAG < 41bp 1 0.611557107398465 1 0.103077173233032 experiment 0.776885785203069 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 24 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147508 chr6:137147511 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_27611 0 0 0 2 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chr6 137147540 137147540 1 + C G BRCA 137147555 + 137147535 137147575 41 TGGCTCGCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC TGGCTGGCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC < 41bp 1 0.717401452581588 1 0.198956280946732 experiment 0.565197094836823 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 6 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147555 chr6:137147540 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_27612 0 0 0 2 137147540 137147563 mRNA hsa-miR-34a PEX7 miRanda miRanda
14034 chr6 137147540 137147540 1 + C G BRCA 137147555 + 137147535 137147575 41 TGGCTCGCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC TGGCTGGCTGCAGCTCTGGGACACTGCCAAAGCTGCAGGGC < 41bp 1 0.717401452581588 1 0.198956280946732 experiment 0.565197094836823 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 6 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147555 chr6:137147540 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_27612 0 0 0 2 137147540 137147563 mRNA hsa-miR-34c-5p PEX7 miRanda miRanda
14034 chrX 48759265 48759265 1 + G A BRCA 48759266 + 48759246 48759286 41 ATCCTGGCTCTCCCCACATGACCCCAACTCCGTGGTTACCA ATCCTGGCTCTCCCCACATAACCCCAACTCCGTGGTTACCA < 41bp 1 0.189896467641569 1 0.0749482810497284 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759266 chrX:48759265 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27654 0 0 1 1 48759243 48759265 mRNA hsa-miR-299-3p PQBP1 miRanda miRanda
14034 chrX 48759632 48759632 1 + G A BRCA 48759633 + 48759613 48759653 41 CCGGGGCCACGACAAGTCTGACAGGGATCGAGAGCGTGGCT CCGGGGCCACGACAAGTCTAACAGGGATCGAGAGCGTGGCT < 41bp 1 0.551994902395254 1 0.966365337371826 experiment 0.896010195209493 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759633 chrX:48759632 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_27655 0 0 1 1 48759617 48759639 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chr19 50183820 50183820 1 + C G BRCA 50183817 + 50183797 50183837 41 ATCCAAAGATTACTACTTTGACTCCTACGCACACTTTGGCA ATCCAAAGATTACTACTTTGACTGCTACGCACACTTTGGCA < 41bp 1 0.559049906136519 1 0.852941393852234 experiment 0.881900187726963 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 24 PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50183817 chr19:50183820 nonsynonymous SNV 0.956 4 hm6A_associated_SNPs_27659 0 0 1 1 50183809 50183830 mRNA hsa-miR-210 PRMT1 miRanda miRanda
14034 chr17 57262479 57262479 1 + A T BRCA 57262461 + 57262441 57262481 41 CTCAAAGCAGAAGCTGGCTAACATCATCCTGGAACTTCAAT CTCAAAGCAGAAGCTGGCTAACATCATCCTGGAACTTCTAT < 41bp 1 0.544870282782813 1 0.0455650687217712 experiment 0.910259434434375 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262461 chr17:57262479 nonsynonymous SNV 0.021 0 hm6A_associated_SNPs_27667 0 0 1 1 57262476 57262501 mRNA hsa-miR-216b PRR11 miRanda miRanda
14034 chr1 206760274 206760274 1 + G C BRCA 206760268 + 206760248 206760288 41 TATGACAAGTTTAGGCAGAAACTGGAGGAGGCCTTAAGAGA TATGACAAGTTTAGGCAGAAACTGGACGAGGCCTTAAGAGA < 41bp 1 0.535582299794592 1 0.97347617149353 experiment 0.928835400410816 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 RASSF5 ENSG00000136653 CDS Human other chr1:206760268 chr1:206760274 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_27697 0 0 0 1 206760251 206760274 mRNA hsa-miR-145 RASSF5 miRanda miRanda
14034 chr17 30521111 30521111 1 + A G BRCA 30521104 + 30521084 30521124 41 ATGATGATGACCTGGATTTGACACCTGAATATTTGTTCCCC ATGATGATGACCTGGATTTGACACCTGGATATTTGTTCCCC < 41bp 1 0.673606936783813 1 0.671707987785339 experiment 0.652786126432374 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521104 chr17:30521111 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_27713 0 0 1 1 30521107 30521126 mRNA hsa-miR-214 RHOT1 miRanda miRanda
14034 chr1 93300436 93300436 1 + C G BRCA 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGGAGCATAT < 41bp 1 0.707450907327226 1 0.228057235479355 experiment 0.585098185345548 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300436 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27731 0 0 1 2 93300412 93300437 mRNA hsa-miR-103 RPL5 miRanda miRanda
14034 chr1 93300436 93300436 1 + C G BRCA 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGGAGCATAT < 41bp 1 0.707450907327226 1 0.228057235479355 experiment 0.585098185345548 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300436 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27731 0 0 1 2 93300412 93300437 mRNA hsa-miR-107 RPL5 miRanda miRanda
14034 chr17 48560768 48560768 1 + G T BRCA 48560763 + 48560743 48560783 41 CCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGG CCCGGGAGGCTCGGATCCAGACACTTGAGCCTGACAACTGG < 41bp 1 0.794132086285249 1 0.0326403975486755 experiment 0.411735827429502 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48560763 chr17:48560768 nonsynonymous SNV . 0 hm6A_associated_SNPs_27735 0 0 1 4 48560748 48560770 mRNA hsa-miR-199a-5p RSAD1 miRanda miRanda
14034 chr17 48560768 48560768 1 + G T BRCA 48560763 + 48560743 48560783 41 CCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGG CCCGGGAGGCTCGGATCCAGACACTTGAGCCTGACAACTGG < 41bp 1 0.794132086285249 1 0.0326403975486755 experiment 0.411735827429502 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48560763 chr17:48560768 nonsynonymous SNV . 0 hm6A_associated_SNPs_27735 0 0 1 4 48560763 48560784 mRNA hsa-miR-199a-5p RSAD1 miRanda miRanda
14034 chr17 48560768 48560768 1 + G T BRCA 48560763 + 48560743 48560783 41 CCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGG CCCGGGAGGCTCGGATCCAGACACTTGAGCCTGACAACTGG < 41bp 1 0.794132086285249 1 0.0326403975486755 experiment 0.411735827429502 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48560763 chr17:48560768 nonsynonymous SNV . 0 hm6A_associated_SNPs_27735 0 0 1 4 48560748 48560770 mRNA hsa-miR-199b-5p RSAD1 miRanda miRanda
14034 chr17 48560768 48560768 1 + G T BRCA 48560763 + 48560743 48560783 41 CCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGG CCCGGGAGGCTCGGATCCAGACACTTGAGCCTGACAACTGG < 41bp 1 0.794132086285249 1 0.0326403975486755 experiment 0.411735827429502 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48560763 chr17:48560768 nonsynonymous SNV . 0 hm6A_associated_SNPs_27735 0 0 1 4 48560766 48560785 mRNA hsa-miR-145 RSAD1 miRanda miRanda
14034 chr6 76385620 76385620 1 + C G BRCA 76385623 + 76385603 76385643 41 TATTAAATACCTCTGATCTAACTAAATGTGAATGGTGTAAT TATTAAATACCTCTGATGTAACTAAATGTGAATGGTGTAAT < 41bp 1 0.329003604337597 1 0.109535396099091 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76385623 chr6:76385620 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27745 0 0 1 3 76385614 76385634 mRNA hsa-miR-23a SENP6 miRanda miRanda
14034 chr6 76385620 76385620 1 + C G BRCA 76385623 + 76385603 76385643 41 TATTAAATACCTCTGATCTAACTAAATGTGAATGGTGTAAT TATTAAATACCTCTGATGTAACTAAATGTGAATGGTGTAAT < 41bp 1 0.329003604337597 1 0.109535396099091 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76385623 chr6:76385620 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27745 0 0 1 3 76385614 76385634 mRNA hsa-miR-23b SENP6 miRanda miRanda
14034 chr6 76385620 76385620 1 + C G BRCA 76385623 + 76385603 76385643 41 TATTAAATACCTCTGATCTAACTAAATGTGAATGGTGTAAT TATTAAATACCTCTGATGTAACTAAATGTGAATGGTGTAAT < 41bp 1 0.329003604337597 1 0.109535396099091 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76385623 chr6:76385620 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27745 0 0 1 3 76385601 76385621 mRNA hsa-miR-383 SENP6 miRanda miRanda
14034 chr15 92671615 92671615 1 + C T BRCA 92671604 + 92671584 92671624 41 AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTGCAATA AGCACCTGGCTCAGCCCTGGACCCCTACTCGTCCTGCAATA < 41bp 1 0.122918974161076 1 0.666328251361847 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671604 chr15:92671615 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_27782 0 0 1 3 92671615 92671635 mRNA hsa-miR-27a SLCO3A1 miRanda miRanda
14034 chr15 92671615 92671615 1 + C T BRCA 92671604 + 92671584 92671624 41 AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTGCAATA AGCACCTGGCTCAGCCCTGGACCCCTACTCGTCCTGCAATA < 41bp 1 0.122918974161076 1 0.666328251361847 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671604 chr15:92671615 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_27782 0 0 1 3 92671615 92671635 mRNA hsa-miR-27b SLCO3A1 miRanda miRanda
14034 chr15 92671615 92671615 1 + C T BRCA 92671604 + 92671584 92671624 41 AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTGCAATA AGCACCTGGCTCAGCCCTGGACCCCTACTCGTCCTGCAATA < 41bp 1 0.122918974161076 1 0.666328251361847 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671604 chr15:92671615 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_27782 0 0 1 3 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr15 92671615 92671615 1 + C T BRCA 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGTCCTGCAATAATAACTGTGAATGCCAAACCGATT < 41bp 1 0.335149528883759 1 0.945383310317993 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671615 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_27783 0 0 1 3 92671615 92671635 mRNA hsa-miR-27a SLCO3A1 miRanda miRanda
14034 chr15 92671615 92671615 1 + C T BRCA 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGTCCTGCAATAATAACTGTGAATGCCAAACCGATT < 41bp 1 0.335149528883759 1 0.945383310317993 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671615 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_27783 0 0 1 3 92671615 92671635 mRNA hsa-miR-27b SLCO3A1 miRanda miRanda
14034 chr15 92671615 92671615 1 + C T BRCA 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGTCCTGCAATAATAACTGTGAATGCCAAACCGATT < 41bp 1 0.335149528883759 1 0.945383310317993 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671615 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_27783 0 0 1 3 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr9 15444655 15444655 1 + G A BRCA 15444640 + 15444620 15444660 41 AAAGCCTGAAAATTCAGCAGACATGATTGAAGAAGGGGAGC AAAGCCTGAAAATTCAGCAGACATGATTGAAGAAGAGGAGC < 41bp 1 0.753095190679245 1 0.0523000657558441 experiment 0.493809618641509 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 36 SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15444640 chr9:15444655 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_27796 0 0 1 2 15444654 15444676 mRNA hsa-miR-27a SNAPC3 miRanda miRanda
14034 chr9 15444655 15444655 1 + G A BRCA 15444640 + 15444620 15444660 41 AAAGCCTGAAAATTCAGCAGACATGATTGAAGAAGGGGAGC AAAGCCTGAAAATTCAGCAGACATGATTGAAGAAGAGGAGC < 41bp 1 0.753095190679245 1 0.0523000657558441 experiment 0.493809618641509 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 36 SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15444640 chr9:15444655 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_27796 0 0 1 2 15444654 15444676 mRNA hsa-miR-27b SNAPC3 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975422 24975445 mRNA hsa-miR-15a SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975424 24975445 mRNA hsa-miR-16 SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975430 24975455 mRNA hsa-miR-96 SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975419 24975443 mRNA hsa-miR-214 SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975422 24975445 mRNA hsa-miR-15b SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975425 24975445 mRNA hsa-miR-195 SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975421 24975445 mRNA hsa-miR-424 SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975423 24975445 mRNA hsa-miR-497 SRRM1 miRanda miRanda
14034 chr1 24975442 24975442 1 + G A BRCA 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTACTAAG < 41bp 1 0.581664622458107 1 0.86305844783783 experiment 0.836670755083786 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975442 synonymous SNV . 0 hm6A_associated_SNPs_27817 0 0 1 9 24975434 24975455 mRNA hsa-miR-1271 SRRM1 miRanda miRanda
14034 chr5 32601185 32601185 1 + C T BRCA 32601184 + 32601164 32601204 41 ATTGATGATGCAGTAAGAAAACTGTAAAATTCGAGCCATAT ATTGATGATGCAGTAAGAAAATTGTAAAATTCGAGCCATAT Direct Loss 1 0.706147383246847 1 0.861832857131958 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 SUB1 ENSG00000113387 CDS Human protein_coding chr5:32601184 chr5:32601185 synonymous SNV . 0 hm6A_associated_SNPs_27838 0 0 1 2 32601171 32601191 mRNA hsa-miR-139-5p SUB1 miRanda miRanda
14034 chr5 32601185 32601185 1 + C T BRCA 32601184 + 32601164 32601204 41 ATTGATGATGCAGTAAGAAAACTGTAAAATTCGAGCCATAT ATTGATGATGCAGTAAGAAAATTGTAAAATTCGAGCCATAT Direct Loss 1 0.706147383246847 1 0.861832857131958 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 22 SUB1 ENSG00000113387 CDS Human protein_coding chr5:32601184 chr5:32601185 synonymous SNV . 0 hm6A_associated_SNPs_27838 0 0 1 2 32601174 32601195 mRNA hsa-miR-590-3p SUB1 miRanda miRanda
14034 chr12 112583428 112583428 1 + G A BRCA 112583448 + 112583428 112583468 41 GAGGAGCTCTACCCAGAGGAACTGCTGATTGACCATCAGGT AAGGAGCTCTACCCAGAGGAACTGCTGATTGACCATCAGGT < 41bp 1 0.143747366007182 1 0.00650963187217712 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112583448 chr12:112583428 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27875 0 0 1 2 112583425 112583446 mRNA hsa-miR-330-5p TRAFD1 miRanda miRanda
14034 chr12 112583428 112583428 1 + G A BRCA 112583448 + 112583428 112583468 41 GAGGAGCTCTACCCAGAGGAACTGCTGATTGACCATCAGGT AAGGAGCTCTACCCAGAGGAACTGCTGATTGACCATCAGGT < 41bp 1 0.143747366007182 1 0.00650963187217712 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112583448 chr12:112583428 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_27875 0 0 1 2 112583425 112583446 mRNA hsa-miR-326 TRAFD1 miRanda miRanda
14034 chr1 75229688 75229688 1 + C T BRCA 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCTAGAAAAAACACGTGCCC < 41bp 1 0.524753124021915 1 0.927460789680481 experiment 0.950493751956171 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229688 nonsynonymous SNV 0.012 0 hm6A_associated_SNPs_27895 0 0 1 3 75229683 75229705 mRNA hsa-miR-34a TYW3 miRanda miRanda
14034 chr1 75229688 75229688 1 + C T BRCA 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCTAGAAAAAACACGTGCCC < 41bp 1 0.524753124021915 1 0.927460789680481 experiment 0.950493751956171 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229688 nonsynonymous SNV 0.012 0 hm6A_associated_SNPs_27895 0 0 1 3 75229683 75229705 mRNA hsa-miR-449a TYW3 miRanda miRanda
14034 chr1 75229688 75229688 1 + C T BRCA 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCTAGAAAAAACACGTGCCC < 41bp 1 0.524753124021915 1 0.927460789680481 experiment 0.950493751956171 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229688 nonsynonymous SNV 0.012 0 hm6A_associated_SNPs_27895 0 0 1 3 75229683 75229705 mRNA hsa-miR-449b TYW3 miRanda miRanda
14034 chr6 42652568 42652568 1 + A G BRCA 42652549 + 42652529 42652569 41 CAGATATCCAAGAGAATCTAACAAATTAATAAACCTTCCAG CAGATATCCAAGAGAATCTAACAAATTAATAAACCTTCCGG < 41bp 1 0.686157386302432 1 0.00185641646385193 experiment 0.627685227395137 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42652549 chr6:42652568 synonymous SNV . 0 hm6A_associated_SNPs_27907 0 0 1 1 42652567 42652587 mRNA hsa-miR-485-5p UBR2 miRanda miRanda
14034 chr8 30614364 30614364 1 + C G BRCA 30614363 + 30614343 30614383 41 AGAACTTGCCTAAACCTTTAACTGAATTTCCGTCTCCTGCT AGAACTTGCCTAAACCTTTAAGTGAATTTCCGTCTCCTGCT Direct Loss 1 0.0840988171498603 1 0.158790946006775 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 22 UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30614363 chr8:30614364 . 0.001 0 hm6A_associated_SNPs_27908 0 0 1 1 30614363 30614385 mRNA hsa-miR-214 UBXN8 miRanda miRanda
14034 chrX 74519659 74519659 1 + G A BRCA 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACACAAAGAACCAAAGTATAT < 41bp 1 0.549652651195177 1 0.732300579547882 experiment 0.900694697609646 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519659 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27909 0 0 0 5 74519658 74519679 mRNA hsa-miR-96 UPRT miRanda miRanda
14034 chrX 74519659 74519659 1 + G A BRCA 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACACAAAGAACCAAAGTATAT < 41bp 1 0.549652651195177 1 0.732300579547882 experiment 0.900694697609646 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519659 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27909 0 0 0 5 74519656 74519679 mRNA hsa-miR-182 UPRT miRanda miRanda
14034 chrX 74519659 74519659 1 + G A BRCA 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACACAAAGAACCAAAGTATAT < 41bp 1 0.549652651195177 1 0.732300579547882 experiment 0.900694697609646 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519659 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27909 0 0 0 5 74519646 74519666 mRNA hsa-miR-9 UPRT miRanda miRanda
14034 chrX 74519659 74519659 1 + G A BRCA 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACACAAAGAACCAAAGTATAT < 41bp 1 0.549652651195177 1 0.732300579547882 experiment 0.900694697609646 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519659 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27909 0 0 0 5 74519639 74519664 mRNA hsa-miR-149 UPRT miRanda miRanda
14034 chrX 74519659 74519659 1 + G A BRCA 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACACAAAGAACCAAAGTATAT < 41bp 1 0.549652651195177 1 0.732300579547882 experiment 0.900694697609646 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519659 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_27909 0 0 0 5 74519658 74519679 mRNA hsa-miR-1271 UPRT miRanda miRanda
14034 chr7 54636842 54636842 1 + T C BRCA 54636859 + 54636839 54636879 41 CTGTAAAATCTACGGAGCGGACAGCAAAGTTGACCCTAAAC CTGCAAAATCTACGGAGCGGACAGCAAAGTTGACCCTAAAC < 41bp 1 0.728597511147537 1 0.9767906665802 experiment 0.542804977704926 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 4 VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54636859 chr7:54636842 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_27927 0 0 0 1 54636819 54636842 mRNA hsa-miR-125a-3p VSTM2A miRanda miRanda
14034 chrX 73045755 73045755 1 - C A BRCA 73045754 - 73045734 73045774 41 TAAAGATGAGAGAACCTGGGACTGTTGAGCATGTTTAATAC TAAAGATGAGAGAACCTGGTACTGTTGAGCATGTTTAATAC Direct Loss 1 0.742022907640734 1 0.454145848751068 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045754 chrX:73045755 . . 0 hm6A_associated_SNPs_27937 0 0 1 3 73045748 73045768 lncRNA hsa-miR-132-3p XIST miRanda starBase2
14034 chrX 73045755 73045755 1 - C A BRCA 73045754 - 73045734 73045774 41 TAAAGATGAGAGAACCTGGGACTGTTGAGCATGTTTAATAC TAAAGATGAGAGAACCTGGTACTGTTGAGCATGTTTAATAC Direct Loss 1 0.742022907640734 1 0.454145848751068 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045754 chrX:73045755 . . 0 hm6A_associated_SNPs_27937 0 0 1 3 73045748 73045767 lncRNA hsa-miR-212-3p XIST miRanda starBase2
14034 chrX 73045755 73045755 1 - C A BRCA 73045754 - 73045734 73045774 41 TAAAGATGAGAGAACCTGGGACTGTTGAGCATGTTTAATAC TAAAGATGAGAGAACCTGGTACTGTTGAGCATGTTTAATAC Direct Loss 1 0.742022907640734 1 0.454145848751068 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045754 chrX:73045755 . . 0 hm6A_associated_SNPs_27937 0 0 1 3 73045746 73045768 lncRNA hsa-miR-421 XIST miRanda starBase2
14034 chr17 48433561 48433561 1 + T C BRCA 48433567 + 48433547 48433587 41 CCAGTACAAGCACATTGTGGACTGGTGTGGCTGCTCCCCCA CCAGTACAAGCACACTGTGGACTGGTGTGGCTGCTCCCCCA < 41bp 1 0.564604176391658 1 0.999132752418518 experiment 0.870791647216683 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48433567 chr17:48433561 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_27943 0 0 0 1 48433561 48433582 mRNA hsa-miR-497 XYLT2 miRanda miRanda
14034 chr7 148921569 148921569 1 + A G BRCA 148921570 + 148921550 148921590 41 GAGCTTCATCCGCAAGCAGAACCTGCTCAAGCACCAGCGCA GAGCTTCATCCGCAAGCAGGACCTGCTCAAGCACCAGCGCA < 41bp 1 0.757746596959742 1 0.999892234802246 experiment 0.484506806080515 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921570 chr7:148921569 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_27973 0 0 1 1 148921568 148921588 mRNA hsa-miR-138 ZNF282 miRanda miRanda
14034 chr19 58773290 58773290 1 + G C BRCA 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTCAATG < 41bp 1 0.332968177734656 1 0.99958199262619 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773290 nonsynonymous SNV 0.005 1 hm6A_associated_SNPs_27990 0 0 1 2 58773279 58773300 mRNA hsa-miR-544 ZNF544 miRanda miRanda
14034 chr19 58773290 58773290 1 + G C BRCA 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTCAATG < 41bp 1 0.332968177734656 1 0.99958199262619 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773290 nonsynonymous SNV 0.005 1 hm6A_associated_SNPs_27990 0 0 1 2 58773281 58773305 mRNA hsa-miR-876-5p ZNF544 miRanda miRanda
14034 chr19 9453596 9453596 1 + A C BRCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGCACGGCCC < 41bp 1 0.354501528117543 1 0.971195697784424 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453596 nonsynonymous SNV 0.030 3 hm6A_associated_SNPs_27995 0 0 1 6 9453578 9453597 mRNA hsa-miR-27a ZNF559 miRanda miRanda
14034 chr19 9453596 9453596 1 + A C BRCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGCACGGCCC < 41bp 1 0.354501528117543 1 0.971195697784424 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453596 nonsynonymous SNV 0.030 3 hm6A_associated_SNPs_27995 0 0 1 6 9453592 9453613 mRNA hsa-miR-181a ZNF559 miRanda miRanda
14034 chr19 9453596 9453596 1 + A C BRCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGCACGGCCC < 41bp 1 0.354501528117543 1 0.971195697784424 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453596 nonsynonymous SNV 0.030 3 hm6A_associated_SNPs_27995 0 0 1 6 9453592 9453613 mRNA hsa-miR-181b ZNF559 miRanda miRanda
14034 chr19 9453596 9453596 1 + A C BRCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGCACGGCCC < 41bp 1 0.354501528117543 1 0.971195697784424 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453596 nonsynonymous SNV 0.030 3 hm6A_associated_SNPs_27995 0 0 1 6 9453592 9453613 mRNA hsa-miR-181c ZNF559 miRanda miRanda
14034 chr19 9453596 9453596 1 + A C BRCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGCACGGCCC < 41bp 1 0.354501528117543 1 0.971195697784424 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453596 nonsynonymous SNV 0.030 3 hm6A_associated_SNPs_27995 0 0 1 6 9453578 9453597 mRNA hsa-miR-27b ZNF559 miRanda miRanda
14034 chr19 9453596 9453596 1 + A C BRCA 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGCACGGCCC < 41bp 1 0.354501528117543 1 0.971195697784424 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453596 nonsynonymous SNV 0.030 3 hm6A_associated_SNPs_27995 0 0 1 6 9453585 9453613 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr15 64448944 64448944 1 + C G CESC 64448937 + 64448917 64448957 41 AACTCACCATGCCCTCTAGAACTTTGCCAAACACCACATGC AACTCACCATGCCCTCTAGAACTTTGCGAAACACCACATGC < 41bp 1 0.772314129485107 1 0.828930139541626 experiment 0.455371741029786 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 28 PPIB ENSG00000166794 CDS Human protein_coding chr15:64448937 chr15:64448944 nonsynonymous SNV 0.998 5 hm6A_associated_SNPs_28062 0 0 0 1 64448922 64448947 mRNA hsa-miR-182 SNX22 miRanda miRanda
14034 chr11 65272311 65272311 1 + T A CESC 65272293 + 65272273 65272313 41 CTTAATTCTTACATGCAGGAACACTCAGCAGACACACGTAT CTTAATTCTTACATGCAGGAACACTCAGCAGACACACGAAT < 41bp 1 0.336611059437549 1 0.844448864459991 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272293 chr11:65272311 . . 0 hm6A_associated_SNPs_28073 0 0 1 3 65272306 65272325 lncRNA hsa-miR-328-3p MALAT1 miRanda starBase2
14034 chr11 65272311 65272311 1 + T A CESC 65272293 + 65272273 65272313 41 CTTAATTCTTACATGCAGGAACACTCAGCAGACACACGTAT CTTAATTCTTACATGCAGGAACACTCAGCAGACACACGAAT < 41bp 1 0.336611059437549 1 0.844448864459991 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272293 chr11:65272311 . . 0 hm6A_associated_SNPs_28073 0 0 1 3 65272309 65272325 lncRNA hsa-miR-328-3p MALAT1 miRanda starBase2
14034 chr11 65272311 65272311 1 + T A CESC 65272293 + 65272273 65272313 41 CTTAATTCTTACATGCAGGAACACTCAGCAGACACACGTAT CTTAATTCTTACATGCAGGAACACTCAGCAGACACACGAAT < 41bp 1 0.336611059437549 1 0.844448864459991 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272293 chr11:65272311 . . 0 hm6A_associated_SNPs_28073 0 0 1 3 65272309 65272331 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr20 35929721 35929721 1 + G A CESC 35929741 + 35929721 35929761 41 GAGAACCTGCTACGGTACGGACTCTTCCTGGGAGCCATCTT AAGAACCTGCTACGGTACGGACTCTTCCTGGGAGCCATCTT < 41bp 1 0.535599242636958 1 0.947427272796631 experiment 0.928801514726085 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 MANBAL ENSG00000101363 CDS Human protein_coding chr20:35929741 chr20:35929721 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_28132 0 0 1 1 35929720 35929740 mRNA hsa-miR-126 MANBAL miRanda miRanda
14034 chr19 16620604 16620604 1 + G A CESC 16620595 + 16620575 16620615 41 TTGAAAACTCTCCAAGTCTGACAGCATCTGAGCCAACCGCC TTGAAAACTCTCCAAGTCTGACAGCATCTAAGCCAACCGCC < 41bp 1 0.510143984634235 1 0.986948490142822 experiment 0.97971203073153 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 30 C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16620595 chr19:16620604 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_28178 0 0 1 1 16620586 16620609 mRNA hsa-miR-24 C19orf44 miRanda miRanda
14034 chr19 44679942 44679942 1 + C T CESC 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAATATTCCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.523534597131789 1 0.738091111183167 experiment 0.952930805736423 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679942 nonsynonymous SNV 0.103 0 hm6A_associated_SNPs_28187 0 0 1 5 44679927 44679948 mRNA hsa-miR-1 ZNF226 miRanda miRanda
14034 chr19 44679942 44679942 1 + C T CESC 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAATATTCCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.523534597131789 1 0.738091111183167 experiment 0.952930805736423 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679942 nonsynonymous SNV 0.103 0 hm6A_associated_SNPs_28187 0 0 1 5 44679927 44679948 mRNA hsa-miR-206 ZNF226 miRanda miRanda
14034 chr19 44679942 44679942 1 + C T CESC 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAATATTCCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.523534597131789 1 0.738091111183167 experiment 0.952930805736423 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679942 nonsynonymous SNV 0.103 0 hm6A_associated_SNPs_28187 0 0 1 5 44679942 44679962 mRNA hsa-miR-422a ZNF226 miRanda miRanda
14034 chr19 44679942 44679942 1 + C T CESC 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAATATTCCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.523534597131789 1 0.738091111183167 experiment 0.952930805736423 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679942 nonsynonymous SNV 0.103 0 hm6A_associated_SNPs_28187 0 0 1 5 44679931 44679948 mRNA hsa-miR-613 ZNF226 miRanda miRanda
14034 chr19 44679942 44679942 1 + C T CESC 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAATATTCCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.523534597131789 1 0.738091111183167 experiment 0.952930805736423 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679942 nonsynonymous SNV 0.103 0 hm6A_associated_SNPs_28187 0 0 1 5 44679939 44679967 mRNA hsa-miR-216b ZNF226 miRanda miRanda
14034 chr17 18110256 18110256 1 + C T CESC 18110240 + 18110220 18110260 41 AACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAA AACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACTGCAA < 41bp 1 0.305809729146266 1 0.0373247265815735 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 37 ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18110240 chr17:18110256 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28188 0 0 1 1 18110246 18110268 mRNA hsa-miR-346 ALKBH5 miRanda miRanda
14034 chr6 133138134 133138134 1 + C G CESC 133138116 + 133138096 133138136 41 TAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGCCT TAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGGCT < 41bp 1 0.57280281470722 1 0.203214675188065 experiment 0.854394370585559 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 39 RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138116 chr6:133138134 synonymous SNV . 0 hm6A_associated_SNPs_28217 0 0 1 1 133138127 133138147 mRNA hsa-miR-590-3p SNORA33 miRanda miRanda
14034 chr10 70507010 70507010 1 + G A CESC 70507018 + 70506998 70507038 41 GGAATGCACAGAGAATTCAAACACTACCAAATCAGGTACAG GGAATGCACAGAAAATTCAAACACTACCAAATCAGGTACAG < 41bp 1 0.560187536511666 1 0.760332107543945 experiment 0.879624926976667 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507018 chr10:70507010 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_28223 0 0 1 3 70507004 70507027 mRNA hsa-miR-196a CCAR1 miRanda miRanda
14034 chr10 70507010 70507010 1 + G A CESC 70507018 + 70506998 70507038 41 GGAATGCACAGAGAATTCAAACACTACCAAATCAGGTACAG GGAATGCACAGAAAATTCAAACACTACCAAATCAGGTACAG < 41bp 1 0.560187536511666 1 0.760332107543945 experiment 0.879624926976667 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507018 chr10:70507010 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_28223 0 0 1 3 70507002 70507025 mRNA hsa-miR-142-3p CCAR1 miRanda miRanda
14034 chr10 70507010 70507010 1 + G A CESC 70507018 + 70506998 70507038 41 GGAATGCACAGAGAATTCAAACACTACCAAATCAGGTACAG GGAATGCACAGAAAATTCAAACACTACCAAATCAGGTACAG < 41bp 1 0.560187536511666 1 0.760332107543945 experiment 0.879624926976667 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507018 chr10:70507010 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_28223 0 0 1 3 70507005 70507027 mRNA hsa-miR-196b CCAR1 miRanda miRanda
14034 chr14 57876233 57876233 1 + G A CESC 57876238 + 57876218 57876258 41 AACTGTGGCTGCGTTGAGAAACTGACATCAAGGAACAACTA AACTGTGGCTGCGTTAAGAAACTGACATCAAGGAACAACTA < 41bp 1 0.777228907030042 1 0.996092438697815 experiment 0.445542185939916 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 NAA30 ENSG00000139977 CDS Human protein_coding chr14:57876238 chr14:57876233 synonymous SNV . 0 hm6A_associated_SNPs_28294 0 0 1 2 57876222 57876244 mRNA hsa-miR-223 NAA30 miRanda miRanda
14034 chr14 57876233 57876233 1 + G A CESC 57876238 + 57876218 57876258 41 AACTGTGGCTGCGTTGAGAAACTGACATCAAGGAACAACTA AACTGTGGCTGCGTTAAGAAACTGACATCAAGGAACAACTA < 41bp 1 0.777228907030042 1 0.996092438697815 experiment 0.445542185939916 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 NAA30 ENSG00000139977 CDS Human protein_coding chr14:57876238 chr14:57876233 synonymous SNV . 0 hm6A_associated_SNPs_28294 0 0 1 2 57876229 57876249 mRNA hsa-miR-599 NAA30 miRanda miRanda
14034 chr20 33513535 33513535 1 + C T CESC 33513552 + 33513532 33513572 41 GATCACTGGCAGGATTGATGACATGCTCAATGTATCTGGTG GATTACTGGCAGGATTGATGACATGCTCAATGTATCTGGTG < 41bp 1 0.651616194376774 1 0.744834065437317 experiment 0.696767611246452 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33513552 chr20:33513535 nonsynonymous SNV . 0 hm6A_associated_SNPs_28297 0 0 1 2 33513517 33513541 mRNA hsa-miR-199a-5p ACSS2 miRanda miRanda
14034 chr20 33513535 33513535 1 + C T CESC 33513552 + 33513532 33513572 41 GATCACTGGCAGGATTGATGACATGCTCAATGTATCTGGTG GATTACTGGCAGGATTGATGACATGCTCAATGTATCTGGTG < 41bp 1 0.651616194376774 1 0.744834065437317 experiment 0.696767611246452 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33513552 chr20:33513535 nonsynonymous SNV . 0 hm6A_associated_SNPs_28297 0 0 1 2 33513517 33513541 mRNA hsa-miR-199b-5p ACSS2 miRanda miRanda
14034 chr2 71653771 71653771 1 + G A CESC 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGATGTT < 41bp 1 0.653250227067168 1 0.989855647087097 experiment 0.693499545865664 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 37 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653771 nonsynonymous SNV 0.670 0 hm6A_associated_SNPs_28315 0 0 1 1 71653759 71653779 mRNA hsa-miR-371-5p ZNF638 miRanda miRanda
14034 chr2 71653771 71653771 1 + G A CESC 71653784 + 71653764 71653804 41 CCTCGTGGTGTTGAGGGAGAACTATCTTTTGTGACATTGGA CCTCGTGATGTTGAGGGAGAACTATCTTTTGTGACATTGGA < 41bp 1 0.765263307279615 1 0.995436787605286 experiment 0.46947338544077 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 8 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653784 chr2:71653771 nonsynonymous SNV 0.670 0 hm6A_associated_SNPs_28316 0 0 1 1 71653759 71653779 mRNA hsa-miR-371-5p ZNF638 miRanda miRanda
14034 chr16 8906893 8906893 1 + G A CESC 8906887 + 8906867 8906907 41 TGTCTTTCCTGATGGATGGGACAAGAGATACTGTCTGCGAC TGTCTTTCCTGATGGATGGGACAAGAAATACTGTCTGCGAC < 41bp 1 0.72064980806828 1 0.941936612129211 experiment 0.558700383863439 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 PMM2 ENSG00000140650 CDS Human protein_coding chr16:8906887 chr16:8906893 nonsynonymous SNV 0.875 4 hm6A_associated_SNPs_28318 0 0 1 1 8906882 8906901 mRNA hsa-miR-144 PMM2 miRanda miRanda
14034 chrX 41205783 41205783 1 + C T CESC 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTTAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.63035564345408 1 0.984012424945831 experiment 0.73928871309184 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205783 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_28338 0 0 1 3 41205772 41205792 mRNA hsa-miR-23a DDX3X miRanda miRanda
14034 chrX 41205783 41205783 1 + C T CESC 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTTAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.63035564345408 1 0.984012424945831 experiment 0.73928871309184 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205783 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_28338 0 0 1 3 41205765 41205785 mRNA hsa-miR-203 DDX3X miRanda miRanda
14034 chrX 41205783 41205783 1 + C T CESC 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTTAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.63035564345408 1 0.984012424945831 experiment 0.73928871309184 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205783 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_28338 0 0 1 3 41205772 41205792 mRNA hsa-miR-23b DDX3X miRanda miRanda
14034 chr17 76212853 76212853 1 + G C CESC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAACAACA < 41bp 1 0.614675294304058 1 0.413376003503799 experiment 0.770649411391885 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212853 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28345 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212853 76212853 1 + G C CESC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAACAACA < 41bp 1 0.614675294304058 1 0.413376003503799 experiment 0.770649411391885 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212853 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28345 0 0 1 2 76212840 76212859 mRNA hsa-miR-375 BIRC5 miRanda miRanda
14034 chr16 87724057 87724057 1 + C T CESC 87724047 + 87724027 87724067 41 GCCCCGGTTGCTGCGTTGGGACTTGACCTTCTCCCCGCCCC GCCCCGGTTGCTGCGTTGGGACTTGACCTTTTCCCCGCCCC < 41bp 1 0.691963529348268 1 0.990189492702484 experiment 0.616072941303464 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 JPH3 ENSG00000154118 CDS Human protein_coding chr16:87724047 chr16:87724057 synonymous SNV . 0 hm6A_associated_SNPs_28374 0 0 0 1 87724055 87724076 mRNA hsa-miR-876-5p JPH3 miRanda miRanda
14034 chr10 70706374 70706374 1 + G T CESC 70706382 + 70706362 70706402 41 GGGCCACAAACGGAGTTTTGACTGAGTATTTGATAGTTAAT GGGCCACAAACGTAGTTTTGACTGAGTATTTGATAGTTAAT < 41bp 1 0.627809819351097 1 0.95186448097229 experiment 0.744380361297806 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 DDX50 ENSG00000107625 CDS Human protein_coding chr10:70706382 chr10:70706374 synonymous SNV 0.999 0 hm6A_associated_SNPs_28414 0 0 1 1 70706371 70706392 mRNA hsa-miR-216a DDX50 miRanda miRanda
14034 chr17 38144965 38144965 1 + G C CESC 38144982 + 38144962 38145002 41 GCAGAAGATCAGTACTCAGAACCGCCGGGCCCTAGACCTTG GCACAAGATCAGTACTCAGAACCGCCGGGCCCTAGACCTTG < 41bp 1 0.61292569271838 1 0.286356866359711 experiment 0.77414861456324 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38144982 chr17:38144965 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_28438 0 0 1 1 38144944 38144968 mRNA hsa-miR-544 PSMD3 miRanda miRanda
14034 chr1 149291295 149291295 1 + G A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACACAAGCCATAACTACTGCTTTGATTGGACAA < 41bp 1 0.273857020996164 1 0.962682545185089 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291295 . . 0 hm6A_associated_SNPs_28440 0 0 1 4 149291284 149291305 lncRNA hsa-miR-199a-3p AC239800.3 miRanda starBase2
14034 chr1 149291295 149291295 1 + G A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACACAAGCCATAACTACTGCTTTGATTGGACAA < 41bp 1 0.273857020996164 1 0.962682545185089 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291295 . . 0 hm6A_associated_SNPs_28440 0 0 1 4 149291284 149291305 lncRNA hsa-miR-199b-3p AC239800.3 miRanda starBase2
14034 chr1 149291295 149291295 1 + G A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACACAAGCCATAACTACTGCTTTGATTGGACAA < 41bp 1 0.273857020996164 1 0.962682545185089 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291295 . . 0 hm6A_associated_SNPs_28440 0 0 1 4 149291284 149291305 lncRNA hsa-miR-3129-5p AC239800.3 miRanda starBase2
14034 chr1 149291295 149291295 1 + G A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACACAAGCCATAACTACTGCTTTGATTGGACAA < 41bp 1 0.273857020996164 1 0.962682545185089 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291295 . . 0 hm6A_associated_SNPs_28440 0 0 1 4 149291283 149291310 lncRNA hsa-miR-330-3p AC239800.3 miRanda starBase2
14034 chr1 60309154 60309154 1 + G A CESC 60309166 + 60309146 60309186 41 AATGAGATGATGAATGAAAAACTTGACCAGTTGGATGGCTC AATGAGATAATGAATGAAAAACTTGACCAGTTGGATGGCTC < 41bp 1 0.307842757499358 1 0.391460716724396 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60309166 chr1:60309154 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_28449 0 0 1 1 60309151 60309173 mRNA hsa-miR-223 HOOK1 miRanda miRanda
14034 chr1 203276492 203276492 1 + C A CESC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCATCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.636697158153513 1 0.99677836894989 experiment 0.726605683692974 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 8 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276492 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_28517 0 0 1 1 203276477 203276500 mRNA hsa-miR-125a-3p BTG2 miRanda miRanda
14034 chr5 56545261 56545261 1 + C T CESC 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCTTGTTGACAAACTTAATCAGCAGCCTCGTCT < 41bp 1 0.383493045153611 1 0.247733175754547 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545261 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28519 0 0 1 2 56545248 56545269 mRNA hsa-miR-505 GPBP1 miRanda miRanda
14034 chr5 56545261 56545261 1 + C T CESC 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCTTGTTGACAAACTTAATCAGCAGCCTCGTCT < 41bp 1 0.383493045153611 1 0.247733175754547 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545261 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28519 0 0 1 2 56545241 56545268 mRNA hsa-miR-421 GPBP1 miRanda miRanda
14034 chr2 173431646 173431646 1 + C T CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCGAACTAGAATTTGAAGAACTAAA < 41bp 1 0.192146130994262 1 0.718943119049072 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431646 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_28527 0 0 1 5 173431630 173431651 mRNA hsa-miR-26a PDK1 miRanda miRanda
14034 chr2 173431646 173431646 1 + C T CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCGAACTAGAATTTGAAGAACTAAA < 41bp 1 0.192146130994262 1 0.718943119049072 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431646 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_28527 0 0 1 5 173431628 173431651 mRNA hsa-miR-26b PDK1 miRanda miRanda
14034 chr2 173431646 173431646 1 + C T CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCGAACTAGAATTTGAAGAACTAAA < 41bp 1 0.192146130994262 1 0.718943119049072 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431646 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_28527 0 0 1 5 173431644 173431661 mRNA hsa-miR-33a PDK1 miRanda miRanda
14034 chr2 173431646 173431646 1 + C T CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCGAACTAGAATTTGAAGAACTAAA < 41bp 1 0.192146130994262 1 0.718943119049072 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431646 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_28527 0 0 1 5 173431645 173431661 mRNA hsa-miR-33b PDK1 miRanda miRanda
14034 chr2 173431646 173431646 1 + C T CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCGAACTAGAATTTGAAGAACTAAA < 41bp 1 0.192146130994262 1 0.718943119049072 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431646 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_28527 0 0 1 5 173431635 173431651 mRNA hsa-miR-1297 PDK1 miRanda miRanda
14034 chr19 12903588 12903588 1 + G A CESC 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACAGCTGT < 41bp 1 0.502982219782819 1 0.999594271183014 experiment 0.994035560434362 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903588 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28586 0 0 0 6 12903582 12903605 mRNA hsa-miR-15a JUNB miRanda miRanda
14034 chr19 12903588 12903588 1 + G A CESC 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACAGCTGT < 41bp 1 0.502982219782819 1 0.999594271183014 experiment 0.994035560434362 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903588 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28586 0 0 0 6 12903585 12903605 mRNA hsa-miR-16 JUNB miRanda miRanda
14034 chr19 12903588 12903588 1 + G A CESC 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACAGCTGT < 41bp 1 0.502982219782819 1 0.999594271183014 experiment 0.994035560434362 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903588 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28586 0 0 0 6 12903584 12903605 mRNA hsa-miR-15b JUNB miRanda miRanda
14034 chr19 12903588 12903588 1 + G A CESC 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACAGCTGT < 41bp 1 0.502982219782819 1 0.999594271183014 experiment 0.994035560434362 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903588 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28586 0 0 0 6 12903584 12903605 mRNA hsa-miR-195 JUNB miRanda miRanda
14034 chr19 12903588 12903588 1 + G A CESC 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACAGCTGT < 41bp 1 0.502982219782819 1 0.999594271183014 experiment 0.994035560434362 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903588 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28586 0 0 0 6 12903582 12903605 mRNA hsa-miR-424 JUNB miRanda miRanda
14034 chr19 12903588 12903588 1 + G A CESC 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACAGCTGT < 41bp 1 0.502982219782819 1 0.999594271183014 experiment 0.994035560434362 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903588 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28586 0 0 0 6 12903582 12903605 mRNA hsa-miR-497 JUNB miRanda miRanda
14034 chr19 803601 803601 1 + G A CESC 803602 + 803582 803622 41 TCTACTTGTGTCACTAACGGACCGTTTATCATGAGCAGCAA TCTACTTGTGTCACTAACGAACCGTTTATCATGAGCAGCAA < 41bp 1 0.163232209802814 1 0.620396733283997 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803602 chr19:803601 nonsynonymous SNV 0.618 2 hm6A_associated_SNPs_28598 0 0 1 1 803592 803616 mRNA hsa-miR-433 PTBP1 miRanda miRanda
14034 chr9 36198991 36198991 1 + A C CESC 36198995 + 36198975 36199015 41 GGAAAGTAATGGTCCAACAGACAGTTATGCAGCTATTTCAC GGAAAGTAATGGTCCACCAGACAGTTATGCAGCTATTTCAC < 41bp 1 0.668529178483042 1 0.826618790626526 experiment 0.662941643033917 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 17 CLTA ENSG00000122705 CDS Human protein_coding chr9:36198995 chr9:36198991 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_28619 0 0 1 1 36198988 36199009 mRNA hsa-miR-22 CLTA miRanda miRanda
14034 chr12 57910065 57910065 1 + T G CESC 57910061 + 57910041 57910081 41 CGAAGCCAGCAGTTGTAGAGACTGTTACAACAGCCAAGCCA CGAAGCCAGCAGTTGTAGAGACTGGTACAACAGCCAAGCCA < 41bp 1 0.736880736356812 1 0.961193799972534 experiment 0.526238527286376 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 MARS ENSG00000166986 CDS Human protein_coding chr12:57910061 chr12:57910065 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_28718 0 0 1 3 57910048 57910067 mRNA hsa-miR-212 MARS miRanda miRanda
14034 chr12 57910065 57910065 1 + T G CESC 57910061 + 57910041 57910081 41 CGAAGCCAGCAGTTGTAGAGACTGTTACAACAGCCAAGCCA CGAAGCCAGCAGTTGTAGAGACTGGTACAACAGCCAAGCCA < 41bp 1 0.736880736356812 1 0.961193799972534 experiment 0.526238527286376 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 MARS ENSG00000166986 CDS Human protein_coding chr12:57910061 chr12:57910065 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_28718 0 0 1 3 57910043 57910067 mRNA hsa-miR-132 MARS miRanda miRanda
14034 chr12 57910065 57910065 1 + T G CESC 57910061 + 57910041 57910081 41 CGAAGCCAGCAGTTGTAGAGACTGTTACAACAGCCAAGCCA CGAAGCCAGCAGTTGTAGAGACTGGTACAACAGCCAAGCCA < 41bp 1 0.736880736356812 1 0.961193799972534 experiment 0.526238527286376 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 MARS ENSG00000166986 CDS Human protein_coding chr12:57910061 chr12:57910065 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_28718 0 0 1 3 57910048 57910069 mRNA hsa-miR-194 MARS miRanda miRanda
14034 chrX 155255055 155255055 1 + C T CESC 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGGCTCCATGACACTTTCCCCCCCAGACCCA < 41bp 1 0.363255113476722 1 0.982764422893524 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255055 . . 0 hm6A_associated_SNPs_28752 0 0 1 2 155255040 155255058 mRNA hsa-miR-18a WASH6P miRanda miRanda
14034 chrX 155255055 155255055 1 + C T CESC 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGGCTCCATGACACTTTCCCCCCCAGACCCA < 41bp 1 0.363255113476722 1 0.982764422893524 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255055 . . 0 hm6A_associated_SNPs_28752 0 0 1 2 155255040 155255058 mRNA hsa-miR-18b WASH6P miRanda miRanda
14034 chrX 41202502 41202502 1 + G A CESC 41202506 + 41202486 41202526 41 GGGAGAAATTATCATGGGAAACATTGAGCTTACTCGTTATA GGGAGAAATTATCATGAGAAACATTGAGCTTACTCGTTATA < 41bp 1 0.546057322012486 1 0.0696059763431549 experiment 0.907885355975028 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 17 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41202506 chrX:41202502 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_28789 0 0 1 1 41202482 41202503 mRNA hsa-miR-433 DDX3X miRanda miRanda
14034 chr6 30882611 30882611 1 + C T CESC 30882605 + 30882585 30882625 41 AGATCTCGGCCCCTTTCCAAACACTCCTGATGCCTCATTTG AGATCTCGGCCCCTTTCCAAACACTCTTGATGCCTCATTTG < 41bp 1 0.52128523799365 1 0.0048535168170929 experiment 0.957429524012701 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 VARS2 ENSG00000137411 CDS Human protein_coding chr6:30882605 chr6:30882611 synonymous SNV . 0 hm6A_associated_SNPs_28819 0 0 1 1 30882590 30882612 mRNA hsa-miR-122 GTF2H4 miRanda miRanda
14034 chr11 65270143 65270143 1 + G A CESC 65270139 + 65270119 65270159 41 ATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGG ATAACATCTTCTGAGTCATAACCAACCTGGCAGTATGATGG < 41bp 1 0.166362993432639 1 0.795686841011047 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 25 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270139 chr11:65270143 . 1.000 0 hm6A_associated_SNPs_28898 0 0 1 2 65270134 65270158 lncRNA hsa-miR-154-3p MALAT1 miRanda starBase2
14034 chr11 65270143 65270143 1 + G A CESC 65270139 + 65270119 65270159 41 ATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGG ATAACATCTTCTGAGTCATAACCAACCTGGCAGTATGATGG < 41bp 1 0.166362993432639 1 0.795686841011047 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 25 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270139 chr11:65270143 . 1.000 0 hm6A_associated_SNPs_28898 0 0 1 2 65270137 65270158 lncRNA hsa-miR-487a-3p MALAT1 miRanda starBase2
14034 chr2 173431623 173431623 1 + A G CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTGTATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.213256745678867 1 0.848481953144073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431623 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_28910 0 0 1 3 173431615 173431636 mRNA hsa-miR-185 PDK1 miRanda miRanda
14034 chr2 173431623 173431623 1 + A G CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTGTATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.213256745678867 1 0.848481953144073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431623 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_28910 0 0 1 3 173431605 173431626 mRNA hsa-miR-374a PDK1 miRanda miRanda
14034 chr2 173431623 173431623 1 + A G CESC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTGTATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.213256745678867 1 0.848481953144073 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431623 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_28910 0 0 1 3 173431605 173431626 mRNA hsa-miR-374b PDK1 miRanda miRanda
14034 chr5 7878114 7878114 1 + T G CESC 7878132 + 7878112 7878152 41 CATTTTAGGTCAAGCAGAGGACAAGAGGAGATAAGTGGCGC CAGTTTAGGTCAAGCAGAGGACAAGAGGAGATAAGTGGCGC < 41bp 1 0.772029852161789 1 0.93157958984375 experiment 0.455940295676423 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 MTRR ENSG00000124275 CDS Human protein_coding chr5:7878132 chr5:7878114 nonsynonymous SNV 0.445 0 hm6A_associated_SNPs_28915 0 0 1 2 7878105 7878124 mRNA hsa-miR-192 MTRR miRanda miRanda
14034 chr5 7878114 7878114 1 + T G CESC 7878132 + 7878112 7878152 41 CATTTTAGGTCAAGCAGAGGACAAGAGGAGATAAGTGGCGC CAGTTTAGGTCAAGCAGAGGACAAGAGGAGATAAGTGGCGC < 41bp 1 0.772029852161789 1 0.93157958984375 experiment 0.455940295676423 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 MTRR ENSG00000124275 CDS Human protein_coding chr5:7878132 chr5:7878114 nonsynonymous SNV 0.445 0 hm6A_associated_SNPs_28915 0 0 1 2 7878105 7878124 mRNA hsa-miR-215 MTRR miRanda miRanda
14034 chr17 42745401 42745401 1 + G A CESC 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TAACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT < 41bp 1 0.516285677436159 1 0.0157380998134613 experiment 0.967428645127681 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745401 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_28964 0 0 0 1 42745396 42745418 mRNA hsa-miR-376b C17orf104 miRanda miRanda
14034 chrX 153670090 153670090 1 + G A CESC 153670079 + 153670059 153670099 41 CCTTAGCCACCCCATCAAGAACACCAACGACGCCAACTCCT CCTTAGCCACCCCATCAAGAACACCAACGACACCAACTCCT < 41bp 1 0.692319437546683 1 0.93920373916626 experiment 0.615361124906634 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153670079 chrX:153670090 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_28978 0 0 1 3 153670083 153670105 mRNA hsa-miR-96 GDI1 miRanda miRanda
14034 chrX 153670090 153670090 1 + G A CESC 153670079 + 153670059 153670099 41 CCTTAGCCACCCCATCAAGAACACCAACGACGCCAACTCCT CCTTAGCCACCCCATCAAGAACACCAACGACACCAACTCCT < 41bp 1 0.692319437546683 1 0.93920373916626 experiment 0.615361124906634 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153670079 chrX:153670090 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_28978 0 0 1 3 153670082 153670105 mRNA hsa-miR-182 GDI1 miRanda miRanda
14034 chrX 153670090 153670090 1 + G A CESC 153670079 + 153670059 153670099 41 CCTTAGCCACCCCATCAAGAACACCAACGACGCCAACTCCT CCTTAGCCACCCCATCAAGAACACCAACGACACCAACTCCT < 41bp 1 0.692319437546683 1 0.93920373916626 experiment 0.615361124906634 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153670079 chrX:153670090 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_28978 0 0 1 3 153670084 153670105 mRNA hsa-miR-1271 GDI1 miRanda miRanda
14034 chr1 109299362 109299362 1 + C T CESC 109299349 + 109299329 109299369 41 AAGAACCGTGAACCTGTCAGACAAATGAAAGCTCTTTATTT AAGAACCGTGAACCTGTCAGACAAATGAAAGCTTTTTATTT < 41bp 1 0.766185407659356 1 0.832962512969971 experiment 0.467629184681289 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31548708;GSE125780;DART-seq;HEK293T;Control 34 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109299349 chr1:109299362 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28987 0 0 1 2 109299358 109299379 mRNA hsa-miR-122 STXBP3 miRanda miRanda
14034 chr1 109299362 109299362 1 + C T CESC 109299349 + 109299329 109299369 41 AAGAACCGTGAACCTGTCAGACAAATGAAAGCTCTTTATTT AAGAACCGTGAACCTGTCAGACAAATGAAAGCTTTTTATTT < 41bp 1 0.766185407659356 1 0.832962512969971 experiment 0.467629184681289 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31548708;GSE125780;DART-seq;HEK293T;Control 34 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109299349 chr1:109299362 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_28987 0 0 1 2 109299344 109299366 mRNA hsa-miR-335 STXBP3 miRanda miRanda
14034 chrX 73046247 73046247 1 - G A CESC 73046232 - 73046212 73046252 41 ATCTTCTCCACTTGAGAGAGACACCAAAATCCAGTCAGTAT ATCTTTTCCACTTGAGAGAGACACCAAAATCCAGTCAGTAT < 41bp 1 0.622303731056349 1 0.910200238227844 experiment 0.755392537887302 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046232 chrX:73046247 . . 0 hm6A_associated_SNPs_28992 0 0 1 2 73046235 73046258 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046247 73046247 1 - G A CESC 73046232 - 73046212 73046252 41 ATCTTCTCCACTTGAGAGAGACACCAAAATCCAGTCAGTAT ATCTTTTCCACTTGAGAGAGACACCAAAATCCAGTCAGTAT < 41bp 1 0.622303731056349 1 0.910200238227844 experiment 0.755392537887302 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046232 chrX:73046247 . . 0 hm6A_associated_SNPs_28992 0 0 1 2 73046235 73046257 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chrX 40450579 40450579 1 + C G CESC 40450568 + 40450548 40450588 41 GGTGATGGTGAAGGGAGTGAACAAACTGGCTCTACCCCCAG GGTGATGGTGAAGGGAGTGAACAAACTGGCTGTACCCCCAG < 41bp 1 0.541955463452201 1 0.335137248039246 experiment 0.916089073095597 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40450568 chrX:40450579 nonsynonymous SNV 0.976 2 hm6A_associated_SNPs_29017 0 0 1 1 40450577 40450599 mRNA hsa-miR-425 ATP6AP2 miRanda miRanda
14034 chr8 144103002 144103002 1 + C T CESC 144103018 + 144102998 144103038 41 TTGGCCACAGCCTGAGCAAGACCTGTTCCCCGGCCTGCCCC TTGGTCACAGCCTGAGCAAGACCTGTTCCCCGGCCTGCCCC < 41bp 1 0.620371350916975 1 0.788606822490692 experiment 0.759257298166049 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 LY6E ENSG00000160932 CDS Human protein_coding chr8:144103018 chr8:144103002 synonymous SNV . 0 hm6A_associated_SNPs_29043 0 0 1 1 144102998 144103020 mRNA hsa-miR-431 LY6E miRanda miRanda
14034 chr14 22476215 22476215 1 + G C CESC 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTC < 41bp 1 0.0612427525427286 1 0.941755056381226 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476215 nonsynonymous SNV . 0 hm6A_associated_SNPs_29093 0 0 0 2 22476205 22476225 mRNA hsa-miR-196a TRAV20 miRanda miRanda
14034 chr14 22476215 22476215 1 + G C CESC 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTC < 41bp 1 0.0612427525427286 1 0.941755056381226 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476215 nonsynonymous SNV . 0 hm6A_associated_SNPs_29093 0 0 0 2 22476205 22476225 mRNA hsa-miR-196b TRAV20 miRanda miRanda
14034 chr11 65271372 65271372 1 + G A CESC 65271373 + 65271353 65271393 41 AGGAATAAATAACCTCTTAGACAGGTGGGAGATTATGATCA AGGAATAAATAACCTCTTAAACAGGTGGGAGATTATGATCA < 41bp 1 0.071968883535382 1 0.0104907751083374 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271373 chr11:65271372 . . 0 hm6A_associated_SNPs_29102 0 0 1 1 65271360 65271384 lncRNA hsa-miR-532-3p MALAT1 miRanda starBase2
14034 chr3 158399824 158399824 1 + C T CESC 158399805 + 158399785 158399825 41 TTTGACTTTACACATAAAAAACAATCAGGTGGTGCAGGCCA TTTGACTTTACACATAAAAAACAATCAGGTGGTGCAGGCTA < 41bp 1 0.788745054690065 1 0.351201623678207 experiment 0.42250989061987 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158399805 chr3:158399824 stopgain 1.000 1 hm6A_associated_SNPs_29108 0 0 0 2 158399807 158399828 mRNA hsa-miR-193a-3p GFM1 miRanda miRanda
14034 chr3 158399824 158399824 1 + C T CESC 158399805 + 158399785 158399825 41 TTTGACTTTACACATAAAAAACAATCAGGTGGTGCAGGCCA TTTGACTTTACACATAAAAAACAATCAGGTGGTGCAGGCTA < 41bp 1 0.788745054690065 1 0.351201623678207 experiment 0.42250989061987 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158399805 chr3:158399824 stopgain 1.000 1 hm6A_associated_SNPs_29108 0 0 0 2 158399807 158399828 mRNA hsa-miR-193b GFM1 miRanda miRanda
14034 chr3 112714067 112714067 1 + A G CESC 112714079 + 112714059 112714099 41 AGCACCTGAAGATTTTGTTGACATGGTAGAGACCTATCTAA AGCACCTGGAGATTTTGTTGACATGGTAGAGACCTATCTAA < 41bp 1 0.77191533189414 1 0.0317133367061615 experiment 0.456169336211721 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112714079 chr3:112714067 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_29111 0 0 1 1 112714056 112714081 mRNA hsa-miR-505 GTPBP8 miRanda miRanda
14034 chr10 1038548 1038548 1 + G T CESC 1038563 + 1038543 1038583 41 CAACAGAATTACCATGATAGACTTTCACAAATTCTAACAGA CAACATAATTACCATGATAGACTTTCACAAATTCTAACAGA < 41bp 1 0.581058478189093 1 0.854274451732635 experiment 0.837883043621815 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1038563 chr10:1038548 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_29137 0 0 1 1 1038528 1038548 mRNA hsa-miR-653 GTPBP4 miRanda miRanda
14034 chr15 49917417 49917417 1 + A C CESC 49917428 + 49917408 49917448 41 ATAGTTCAAAATTTGTGGAAACAAAACAGTCACAAACTACT ATAGTTCAACATTTGTGGAAACAAAACAGTCACAAACTACT < 41bp 1 0.705928687047594 1 0.911363005638123 experiment 0.588142625904811 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917428 chr15:49917417 nonsynonymous SNV 0.993 0 hm6A_associated_SNPs_29155 0 0 0 1 49917417 49917443 mRNA hsa-miR-758 DTWD1 miRanda miRanda
14034 chr19 50906815 50906815 1 + C T CESC 50906811 + 50906791 50906831 41 CACCGGTTACAACATCCAGAACTTCGACCTTCCGTACCTCA CACCGGTTACAACATCCAGAACTTTGACCTTCCGTACCTCA < 41bp 1 0.317015788557751 1 0.921113133430481 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906811 chr19:50906815 synonymous SNV . 0 hm6A_associated_SNPs_29181 1 0 1 1 50906808 50906831 mRNA hsa-miR-98 POLD1 miRanda miRanda
14034 chr12 69987309 69987309 1 + C T CESC 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATTCTGAACAGCTCTTTGGTGCTGCTGG < 41bp 1 0.615462991928614 1 0.109887182712555 experiment 0.769074016142773 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 16 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987309 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_29209 0 0 1 3 69987309 69987330 mRNA hsa-miR-29a CCT2 miRanda miRanda
14034 chr12 69987309 69987309 1 + C T CESC 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATTCTGAACAGCTCTTTGGTGCTGCTGG < 41bp 1 0.615462991928614 1 0.109887182712555 experiment 0.769074016142773 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 16 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987309 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_29209 0 0 1 3 69987308 69987330 mRNA hsa-miR-29b CCT2 miRanda miRanda
14034 chr12 69987309 69987309 1 + C T CESC 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATTCTGAACAGCTCTTTGGTGCTGCTGG < 41bp 1 0.615462991928614 1 0.109887182712555 experiment 0.769074016142773 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 16 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987309 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_29209 0 0 1 3 69987309 69987330 mRNA hsa-miR-29c CCT2 miRanda miRanda
14034 chr6 83846971 83846971 1 + C T CESC 83846961 + 83846941 83846981 41 TACCATGGATGAAATAGAGAACTTTAGTCTCACTGTGAATC TACCATGGATGAAATAGAGAACTTTAGTCTTACTGTGAATC < 41bp 1 0.717741152886487 1 0.899715065956116 experiment 0.564517694227027 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 31 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846961 chr6:83846971 synonymous SNV . 0 hm6A_associated_SNPs_29242 0 0 1 3 83846956 83846979 mRNA hsa-miR-27a DOPEY1 miRanda miRanda
14034 chr6 83846971 83846971 1 + C T CESC 83846961 + 83846941 83846981 41 TACCATGGATGAAATAGAGAACTTTAGTCTCACTGTGAATC TACCATGGATGAAATAGAGAACTTTAGTCTTACTGTGAATC < 41bp 1 0.717741152886487 1 0.899715065956116 experiment 0.564517694227027 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 31 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846961 chr6:83846971 synonymous SNV . 0 hm6A_associated_SNPs_29242 0 0 1 3 83846956 83846979 mRNA hsa-miR-27b DOPEY1 miRanda miRanda
14034 chr6 83846971 83846971 1 + C T CESC 83846961 + 83846941 83846981 41 TACCATGGATGAAATAGAGAACTTTAGTCTCACTGTGAATC TACCATGGATGAAATAGAGAACTTTAGTCTTACTGTGAATC < 41bp 1 0.717741152886487 1 0.899715065956116 experiment 0.564517694227027 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 31 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846961 chr6:83846971 synonymous SNV . 0 hm6A_associated_SNPs_29242 0 0 1 3 83846954 83846978 mRNA hsa-miR-128 DOPEY1 miRanda miRanda
14034 chr6 83846971 83846971 1 + C T CESC 83846991 + 83846971 83847011 41 CACTGTGAATCCATTAAGTGACAGACTTTCCCTCCTAAGTA TACTGTGAATCCATTAAGTGACAGACTTTCCCTCCTAAGTA < 41bp 1 0.783057268226952 1 0.760296940803528 experiment 0.433885463546097 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846991 chr6:83846971 synonymous SNV . 0 hm6A_associated_SNPs_29243 0 0 1 3 83846956 83846979 mRNA hsa-miR-27a DOPEY1 miRanda miRanda
14034 chr6 83846971 83846971 1 + C T CESC 83846991 + 83846971 83847011 41 CACTGTGAATCCATTAAGTGACAGACTTTCCCTCCTAAGTA TACTGTGAATCCATTAAGTGACAGACTTTCCCTCCTAAGTA < 41bp 1 0.783057268226952 1 0.760296940803528 experiment 0.433885463546097 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846991 chr6:83846971 synonymous SNV . 0 hm6A_associated_SNPs_29243 0 0 1 3 83846956 83846979 mRNA hsa-miR-27b DOPEY1 miRanda miRanda
14034 chr6 83846971 83846971 1 + C T CESC 83846991 + 83846971 83847011 41 CACTGTGAATCCATTAAGTGACAGACTTTCCCTCCTAAGTA TACTGTGAATCCATTAAGTGACAGACTTTCCCTCCTAAGTA < 41bp 1 0.783057268226952 1 0.760296940803528 experiment 0.433885463546097 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83846991 chr6:83846971 synonymous SNV . 0 hm6A_associated_SNPs_29243 0 0 1 3 83846954 83846978 mRNA hsa-miR-128 DOPEY1 miRanda miRanda
14034 chr11 65266569 65266569 1 + G C CESC 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GGCAGGCGGAGCTTCAGGAAACCGCAGATAAGTTTTTTTCT < 41bp 1 0.0459677350103415 1 0.567440748214722 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266569 . . 0 hm6A_associated_SNPs_29253 0 0 1 1 65266555 65266575 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr3 129200485 129200485 1 + A T CESC 129200491 + 129200471 129200511 41 GGCCGTGGTAGATGAAAATGACACTTGCCTGGTGTATGACA GGCCGTGGTAGATGTAAATGACACTTGCCTGGTGTATGACA < 41bp 1 0.677010095768778 1 0.988534927368164 experiment 0.645979808462444 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 15 IFT122 ENSG00000163913 CDS Human protein_coding chr3:129200491 chr3:129200485 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_29262 0 0 0 2 129200477 129200500 mRNA hsa-miR-449a IFT122 miRanda miRanda
14034 chr3 129200485 129200485 1 + A T CESC 129200491 + 129200471 129200511 41 GGCCGTGGTAGATGAAAATGACACTTGCCTGGTGTATGACA GGCCGTGGTAGATGTAAATGACACTTGCCTGGTGTATGACA < 41bp 1 0.677010095768778 1 0.988534927368164 experiment 0.645979808462444 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 15 IFT122 ENSG00000163913 CDS Human protein_coding chr3:129200491 chr3:129200485 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_29262 0 0 0 2 129200477 129200500 mRNA hsa-miR-449b IFT122 miRanda miRanda
14034 chr15 49528054 49528054 1 + C A CESC 49528071 + 49528051 49528091 41 CTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA CTTAAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA < 41bp 1 0.620091758276005 1 0.0869603753089905 experiment 0.759816483447989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 GALK2 ENSG00000156958 CDS Human protein_coding chr15:49528071 chr15:49528054 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_29267 0 0 1 4 49528048 49528070 mRNA hsa-miR-25 GALK2 miRanda miRanda
14034 chr15 49528054 49528054 1 + C A CESC 49528071 + 49528051 49528091 41 CTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA CTTAAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA < 41bp 1 0.620091758276005 1 0.0869603753089905 experiment 0.759816483447989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 GALK2 ENSG00000156958 CDS Human protein_coding chr15:49528071 chr15:49528054 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_29267 0 0 1 4 49528048 49528070 mRNA hsa-miR-32 GALK2 miRanda miRanda
14034 chr15 49528054 49528054 1 + C A CESC 49528071 + 49528051 49528091 41 CTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA CTTAAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA < 41bp 1 0.620091758276005 1 0.0869603753089905 experiment 0.759816483447989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 GALK2 ENSG00000156958 CDS Human protein_coding chr15:49528071 chr15:49528054 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_29267 0 0 1 4 49528048 49528070 mRNA hsa-miR-92a GALK2 miRanda miRanda
14034 chr15 49528054 49528054 1 + C A CESC 49528071 + 49528051 49528091 41 CTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA CTTAAGTACTAGTGCTAATAACATCCAGATTGATAAAACCA < 41bp 1 0.620091758276005 1 0.0869603753089905 experiment 0.759816483447989 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 GALK2 ENSG00000156958 CDS Human protein_coding chr15:49528071 chr15:49528054 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_29267 0 0 1 4 49528048 49528070 mRNA hsa-miR-92b GALK2 miRanda miRanda
14034 chr1 150307413 150307413 1 + G C CESC 150307423 + 150307403 150307443 41 CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCAC CAGGAAGGTGCAGTTAAAAGACCAAACGAAACCTACACCAC < 41bp 1 0.431683472173806 1 0.737677931785583 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307423 chr1:150307413 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_29292 0 0 0 2 150307407 150307428 mRNA hsa-miR-133a PRPF3 miRanda miRanda
14034 chr1 150307413 150307413 1 + G C CESC 150307423 + 150307403 150307443 41 CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCAC CAGGAAGGTGCAGTTAAAAGACCAAACGAAACCTACACCAC < 41bp 1 0.431683472173806 1 0.737677931785583 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307423 chr1:150307413 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_29292 0 0 0 2 150307407 150307428 mRNA hsa-miR-133b PRPF3 miRanda miRanda
14034 chr17 62532819 62532819 1 + C T CESC 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGCGAGATGAACAAAGGAGATGCCACCAGGA < 41bp 1 0.678235909743011 1 0.978198051452637 experiment 0.643528180513979 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532819 nonsynonymous SNV 0.347 2 hm6A_associated_SNPs_29311 0 0 1 3 62532796 62532819 mRNA hsa-miR-204 CCDC45 miRanda miRanda
14034 chr17 62532819 62532819 1 + C T CESC 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGCGAGATGAACAAAGGAGATGCCACCAGGA < 41bp 1 0.678235909743011 1 0.978198051452637 experiment 0.643528180513979 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532819 nonsynonymous SNV 0.347 2 hm6A_associated_SNPs_29311 0 0 1 3 62532798 62532819 mRNA hsa-miR-211 CCDC45 miRanda miRanda
14034 chr17 62532819 62532819 1 + C T CESC 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGCGAGATGAACAAAGGAGATGCCACCAGGA < 41bp 1 0.678235909743011 1 0.978198051452637 experiment 0.643528180513979 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532819 nonsynonymous SNV 0.347 2 hm6A_associated_SNPs_29311 0 0 1 3 62532817 62532839 mRNA hsa-miR-145 CCDC45 miRanda miRanda
14034 chr1 76226834 76226834 1 + G T CESC 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA TAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA < 41bp 1 0.281497119010783 1 0.121067047119141 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 1 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226834 stopgain 0.985 1 hm6A_associated_SNPs_29333 0 0 1 3 76226812 76226834 mRNA hsa-miR-15a ACADM miRanda miRanda
14034 chr1 76226834 76226834 1 + G T CESC 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA TAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA < 41bp 1 0.281497119010783 1 0.121067047119141 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 1 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226834 stopgain 0.985 1 hm6A_associated_SNPs_29333 0 0 1 3 76226811 76226834 mRNA hsa-miR-16 ACADM miRanda miRanda
14034 chr1 76226834 76226834 1 + G T CESC 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA TAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA < 41bp 1 0.281497119010783 1 0.121067047119141 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 1 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226834 stopgain 0.985 1 hm6A_associated_SNPs_29333 0 0 1 3 76226812 76226834 mRNA hsa-miR-195 ACADM miRanda miRanda
14034 chrX 24229099 24229099 1 + C T CESC 24229112 + 24229092 24229132 41 AGGCCTTCAGAACTCAAGAAACACGTGGCTGCCCACAAGGG AGGCCTTTAGAACTCAAGAAACACGTGGCTGCCCACAAGGG < 41bp 1 0.792354472266121 1 0.984581828117371 experiment 0.415291055467757 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ZFX ENSG00000005889 CDS Human protein_coding chrX:24229112 chrX:24229099 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_29340 0 0 1 1 24229096 24229120 mRNA hsa-miR-199b-5p ZFX miRanda miRanda
14034 chr17 18638431 18638431 1 + G A CESC 18638411 + 18638391 18638431 41 CAGGCACCTATGTTGGCCTGACCTGCAAAGGCATCGACCAG CAGGCACCTATGTTGGCCTGACCTGCAAAGGCATCGACCAA < 41bp 1 0.799150962005163 1 0.961787462234497 experiment 0.401698075989674 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 TRIM16L ENSG00000108448 CDS Human protein_coding chr17:18638411 chr17:18638431 synonymous SNV . 0 hm6A_associated_SNPs_29367 0 0 0 1 18638426 18638449 mRNA hsa-miR-149 TRIM16L miRanda miRanda
14034 chr17 42745424 42745424 1 + A G CESC 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTTATGATGACTTGAGCCATTTGTACCCTT < 41bp 1 0.528355639566713 1 0.0244777500629425 experiment 0.943288720866573 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745424 synonymous SNV . 0 hm6A_associated_SNPs_29385 0 0 0 3 42745404 42745424 mRNA hsa-miR-224 C17orf104 miRanda miRanda
14034 chr17 42745424 42745424 1 + A G CESC 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTTATGATGACTTGAGCCATTTGTACCCTT < 41bp 1 0.528355639566713 1 0.0244777500629425 experiment 0.943288720866573 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745424 synonymous SNV . 0 hm6A_associated_SNPs_29385 0 0 0 3 42745408 42745431 mRNA hsa-miR-135a C17orf104 miRanda miRanda
14034 chr17 42745424 42745424 1 + A G CESC 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTTATGATGACTTGAGCCATTTGTACCCTT < 41bp 1 0.528355639566713 1 0.0244777500629425 experiment 0.943288720866573 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745424 synonymous SNV . 0 hm6A_associated_SNPs_29385 0 0 0 3 42745408 42745431 mRNA hsa-miR-135b C17orf104 miRanda miRanda
14034 chr19 7710138 7710138 1 + C T CESC 7710155 + 7710135 7710175 41 GCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCA GCATAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCA < 41bp 1 0.137447618523132 1 0.0299122035503387 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7710155 chr19:7710138 synonymous SNV . 0 hm6A_associated_SNPs_29467 0 0 0 1 7710128 7710148 mRNA hsa-miR-485-5p STXBP2 miRanda miRanda
14034 chr1 33292347 33292347 1 + A G CESC 33292353 + 33292333 33292373 41 GCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTG GCTCTCTTCTTCAAGCAATAACTTTCAACAGACTGTCTCTG < 41bp 1 0.72174727261903 1 0.990824460983276 experiment 0.55650545476194 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292353 chr1:33292347 nonsynonymous SNV 0.756 1 hm6A_associated_SNPs_29513 0 0 1 1 33292343 33292363 mRNA hsa-miR-653 S100PBP miRanda miRanda
14034 chr2 27278920 27278920 1 + G A CESC 27278936 + 27278916 27278956 41 TGGCGTTGCTTACTATGTGGACCTGCATGGACATGCTTCCA TGGCATTGCTTACTATGTGGACCTGCATGGACATGCTTCCA < 41bp 1 0.515736091536465 1 0.970463633537292 experiment 0.96852781692707 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 5 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278936 chr2:27278920 nonsynonymous SNV 0.986 1 hm6A_associated_SNPs_29537 0 0 1 2 27278920 27278945 mRNA hsa-miR-214 AGBL5 miRanda miRanda
14034 chr2 27278920 27278920 1 + G A CESC 27278936 + 27278916 27278956 41 TGGCGTTGCTTACTATGTGGACCTGCATGGACATGCTTCCA TGGCATTGCTTACTATGTGGACCTGCATGGACATGCTTCCA < 41bp 1 0.515736091536465 1 0.970463633537292 experiment 0.96852781692707 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 5 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278936 chr2:27278920 nonsynonymous SNV 0.986 1 hm6A_associated_SNPs_29537 0 0 1 2 27278913 27278934 mRNA hsa-miR-376c AGBL5 miRanda miRanda
14034 chrX 73041425 73041425 1 - T G CESC 73041445 - 73041425 73041465 41 GTTCTGAATTGGTCTTAAGAACATTACCAGCTCCAGGTTTA GTTCTGAATTGGTCTTAAGAACATTACCAGCTCCAGGTTTC < 41bp 1 0.595962366500921 1 0.775232911109924 experiment 0.808075266998157 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 41 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041445 chrX:73041425 . . 0 hm6A_associated_SNPs_29538 0 0 1 1 73041403 73041425 lncRNA hsa-miR-6807-3p XIST miRanda starBase2
14034 chr4 48854008 48854008 1 + G C CESC 48853999 + 48853979 48854019 41 TCATATTGTCCAAGGTAGAAACTTCTCTTGAAATGAATTTC TCATATTGTCCAAGGTAGAAACTTCTCTTCAAATGAATTTC < 41bp 1 0.432991704160784 1 0.233653604984283 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48853999 chr4:48854008 stoploss 1.000 0 hm6A_associated_SNPs_29549 0 0 1 2 48853987 48854009 mRNA hsa-miR-335 OCIAD1 miRanda miRanda
14034 chr4 48854008 48854008 1 + G C CESC 48853999 + 48853979 48854019 41 TCATATTGTCCAAGGTAGAAACTTCTCTTGAAATGAATTTC TCATATTGTCCAAGGTAGAAACTTCTCTTCAAATGAATTTC < 41bp 1 0.432991704160784 1 0.233653604984283 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48853999 chr4:48854008 stoploss 1.000 0 hm6A_associated_SNPs_29549 0 0 1 2 48854003 48854024 mRNA hsa-miR-653 OCIAD1 miRanda miRanda
14034 chr2 71660368 71660368 1 + A G CESC 71660372 + 71660352 71660392 41 ACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACA ACTCAGGTGAAAAAGCGATGACAAATCACTGCAAGAGTACA < 41bp 1 0.73293648619903 1 0.0104627013206482 experiment 0.53412702760194 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71660372 chr2:71660368 synonymous SNV . 0 hm6A_associated_SNPs_29586 0 0 1 3 71660350 71660372 mRNA hsa-miR-137 ZNF638 miRanda miRanda
14034 chr2 71660368 71660368 1 + A G CESC 71660372 + 71660352 71660392 41 ACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACA ACTCAGGTGAAAAAGCGATGACAAATCACTGCAAGAGTACA < 41bp 1 0.73293648619903 1 0.0104627013206482 experiment 0.53412702760194 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71660372 chr2:71660368 synonymous SNV . 0 hm6A_associated_SNPs_29586 0 0 1 3 71660366 71660389 mRNA hsa-miR-431 ZNF638 miRanda miRanda
14034 chr2 71660368 71660368 1 + A G CESC 71660372 + 71660352 71660392 41 ACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACA ACTCAGGTGAAAAAGCGATGACAAATCACTGCAAGAGTACA < 41bp 1 0.73293648619903 1 0.0104627013206482 experiment 0.53412702760194 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71660372 chr2:71660368 synonymous SNV . 0 hm6A_associated_SNPs_29586 0 0 1 3 71660355 71660375 mRNA hsa-miR-33b ZNF638 miRanda miRanda
14034 chr1 2106706 2106706 1 + C T CESC 2106709 + 2106689 2106729 41 GCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCT GCCACAGACTGGATTTTTTGACATCAAGTCCCACGCGTTCT < 41bp 1 0.410263491236955 1 0.965250253677368 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 18 PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2106709 chr1:2106706 nonsynonymous SNV 0.973 2 hm6A_associated_SNPs_29587 0 0 0 1 2106696 2106716 mRNA hsa-miR-599 PRKCZ miRanda miRanda
14034 chr1 161197766 161197766 1 + G A CESC 161197746 + 161197726 161197766 41 ATGACTACACAGCCACTCTGACCCTAGGAAATCCTGACCTG ATGACTACACAGCCACTCTGACCCTAGGAAATCCTGACCTA < 41bp 1 0.130364912723058 1 0.571450293064117 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161197746 chr1:161197766 synonymous SNV . 0 hm6A_associated_SNPs_29627 0 0 1 1 161197763 161197779 mRNA hsa-miR-197 TOMM40L miRanda miRanda
14034 chr1 149291289 149291289 1 + C A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACAAAAGCCGTAACTACTGCTTTGATTGGACAA < 41bp 1 0.255782312207075 1 0.971977114677429 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291289 . . 0 hm6A_associated_SNPs_29631 0 0 1 4 149291284 149291305 lncRNA hsa-miR-199a-3p AC239800.3 miRanda starBase2
14034 chr1 149291289 149291289 1 + C A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACAAAAGCCGTAACTACTGCTTTGATTGGACAA < 41bp 1 0.255782312207075 1 0.971977114677429 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291289 . . 0 hm6A_associated_SNPs_29631 0 0 1 4 149291284 149291305 lncRNA hsa-miR-199b-3p AC239800.3 miRanda starBase2
14034 chr1 149291289 149291289 1 + C A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACAAAAGCCGTAACTACTGCTTTGATTGGACAA < 41bp 1 0.255782312207075 1 0.971977114677429 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291289 . . 0 hm6A_associated_SNPs_29631 0 0 1 4 149291284 149291305 lncRNA hsa-miR-3129-5p AC239800.3 miRanda starBase2
14034 chr1 149291289 149291289 1 + C A CESC 149291298 + 149291278 149291318 41 CCCTCCCTACACAAGCCGTAACTACTGCTTTGATTGGACAA CCCTCCCTACAAAAGCCGTAACTACTGCTTTGATTGGACAA < 41bp 1 0.255782312207075 1 0.971977114677429 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 FAM231D;LOC100996741;LOC388692 ENSG00000235999 ncRNA_exonic Human other chr1:149291298 chr1:149291289 . . 0 hm6A_associated_SNPs_29631 0 0 1 4 149291283 149291310 lncRNA hsa-miR-330-3p AC239800.3 miRanda starBase2
14034 chr7 65224225 65224225 1 + G A CESC 65224218 + 65224198 65224238 41 TTTTGAGGACCTAAGTCCTGACTGCTTGAGACATGCAGGAC TTTTGAGGACCTAAGTCCTGACTGCTTAAGACATGCAGGAC < 41bp 1 0.119025963501844 1 0.00138482451438904 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224218 chr7:65224225 . . 0 hm6A_associated_SNPs_29632 0 0 1 3 65224222 65224245 mRNA hsa-miR-381 CCT6P1 miRanda miRanda
14034 chr7 65224225 65224225 1 + G A CESC 65224218 + 65224198 65224238 41 TTTTGAGGACCTAAGTCCTGACTGCTTGAGACATGCAGGAC TTTTGAGGACCTAAGTCCTGACTGCTTAAGACATGCAGGAC < 41bp 1 0.119025963501844 1 0.00138482451438904 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224218 chr7:65224225 . . 0 hm6A_associated_SNPs_29632 0 0 1 3 65224204 65224227 mRNA hsa-miR-421 CCT6P1 miRanda miRanda
14034 chr7 65224225 65224225 1 + G A CESC 65224218 + 65224198 65224238 41 TTTTGAGGACCTAAGTCCTGACTGCTTGAGACATGCAGGAC TTTTGAGGACCTAAGTCCTGACTGCTTAAGACATGCAGGAC < 41bp 1 0.119025963501844 1 0.00138482451438904 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224218 chr7:65224225 . . 0 hm6A_associated_SNPs_29632 0 0 1 3 65224224 65224245 mRNA hsa-miR-300 CCT6P1 miRanda miRanda
14034 chr7 65224225 65224225 1 + G A CESC 65224228 + 65224208 65224248 41 CTAAGTCCTGACTGCTTGAGACATGCAGGACTTGTATATGA CTAAGTCCTGACTGCTTAAGACATGCAGGACTTGTATATGA < 41bp 1 0.426013427135934 1 0.00659763813018799 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224228 chr7:65224225 . . 0 hm6A_associated_SNPs_29633 0 0 1 3 65224222 65224245 mRNA hsa-miR-381 CCT6P1 miRanda miRanda
14034 chr7 65224225 65224225 1 + G A CESC 65224228 + 65224208 65224248 41 CTAAGTCCTGACTGCTTGAGACATGCAGGACTTGTATATGA CTAAGTCCTGACTGCTTAAGACATGCAGGACTTGTATATGA < 41bp 1 0.426013427135934 1 0.00659763813018799 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224228 chr7:65224225 . . 0 hm6A_associated_SNPs_29633 0 0 1 3 65224204 65224227 mRNA hsa-miR-421 CCT6P1 miRanda miRanda
14034 chr7 65224225 65224225 1 + G A CESC 65224228 + 65224208 65224248 41 CTAAGTCCTGACTGCTTGAGACATGCAGGACTTGTATATGA CTAAGTCCTGACTGCTTAAGACATGCAGGACTTGTATATGA < 41bp 1 0.426013427135934 1 0.00659763813018799 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224228 chr7:65224225 . . 0 hm6A_associated_SNPs_29633 0 0 1 3 65224224 65224245 mRNA hsa-miR-300 CCT6P1 miRanda miRanda
14034 chr3 119242575 119242575 1 + C T CESC 119242557 + 119242537 119242577 41 GAAAATTGAAGCACTGCTAAACCTTCCTAGAAACCCTTCAG GAAAATTGAAGCACTGCTAAACCTTCCTAGAAACCCTTTAG < 41bp 1 0.683335866016938 1 0.905623316764832 experiment 0.633328267966123 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119242557 chr3:119242575 nonsynonymous SNV 0.732 1 hm6A_associated_SNPs_29634 0 0 1 1 119242575 119242595 mRNA hsa-miR-431 C3orf1 miRanda miRanda
14034 chr3 119242575 119242575 1 + C T CESC 119242569 + 119242549 119242589 41 ACTGCTAAACCTTCCTAGAAACCCTTCAGTAATAGATAAAC ACTGCTAAACCTTCCTAGAAACCCTTTAGTAATAGATAAAC < 41bp 1 0.68677153613551 1 0.946982085704803 experiment 0.62645692772898 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119242569 chr3:119242575 nonsynonymous SNV 0.732 1 hm6A_associated_SNPs_29635 0 0 1 1 119242575 119242595 mRNA hsa-miR-431 C3orf1 miRanda miRanda
14034 chr2 71654465 71654465 1 + A G CESC 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAAAAGACAAAACTTGAGTCCTTGTCCCAAGT < 41bp 1 0.731057650868816 1 0.990936279296875 experiment 0.537884698262369 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654465 synonymous SNV . 0 hm6A_associated_SNPs_29652 0 0 1 3 71654444 71654465 mRNA hsa-miR-26a ZNF638 miRanda miRanda
14034 chr2 71654465 71654465 1 + A G CESC 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAAAAGACAAAACTTGAGTCCTTGTCCCAAGT < 41bp 1 0.731057650868816 1 0.990936279296875 experiment 0.537884698262369 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654465 synonymous SNV . 0 hm6A_associated_SNPs_29652 0 0 1 3 71654445 71654465 mRNA hsa-miR-26b ZNF638 miRanda miRanda
14034 chr2 71654465 71654465 1 + A G CESC 71654459 + 71654439 71654479 41 GTGGACACAAAAAAGACAAAACTTGAATCCTTGTCCCAAGT GTGGACACAAAAAAGACAAAACTTGAGTCCTTGTCCCAAGT < 41bp 1 0.731057650868816 1 0.990936279296875 experiment 0.537884698262369 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 27 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654459 chr2:71654465 synonymous SNV . 0 hm6A_associated_SNPs_29652 0 0 1 3 71654449 71654465 mRNA hsa-miR-1297 ZNF638 miRanda miRanda
14034 chr7 107217859 107217859 1 + G A CESC 107217861 + 107217841 107217881 41 TGGGTTGACATTGCTCTTGAACTCGGGACTCCTTACATGTG TGGGTTGACATTGCTCTTAAACTCGGGACTCCTTACATGTG < 41bp 1 0.610920500649176 1 0.88063257932663 experiment 0.778158998701648 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 DUS4L ENSG00000105865 CDS Human protein_coding chr7:107217861 chr7:107217859 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_29658 0 0 1 1 107217838 107217860 mRNA hsa-miR-335 DUS4L miRanda miRanda
14034 chr20 44049196 44049196 1 + C T CESC 44049177 + 44049157 44049197 41 TGTGTCCCCAGGACAACGAGACATTAGAGGTGCACCCACCC TGTGTCCCCAGGACAACGAGACATTAGAGGTGCACCCACTC < 41bp 1 0.706317967327599 1 0.900954246520996 experiment 0.587364065344802 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 PIGT ENSG00000124155 CDS Human protein_coding chr20:44049177 chr20:44049196 nonsynonymous SNV 0.005 0 hm6A_associated_SNPs_29667 0 0 1 2 44049193 44049214 mRNA hsa-miR-190 PIGT miRanda miRanda
14034 chr20 44049196 44049196 1 + C T CESC 44049177 + 44049157 44049197 41 TGTGTCCCCAGGACAACGAGACATTAGAGGTGCACCCACCC TGTGTCCCCAGGACAACGAGACATTAGAGGTGCACCCACTC < 41bp 1 0.706317967327599 1 0.900954246520996 experiment 0.587364065344802 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 PIGT ENSG00000124155 CDS Human protein_coding chr20:44049177 chr20:44049196 nonsynonymous SNV 0.005 0 hm6A_associated_SNPs_29667 0 0 1 2 44049193 44049214 mRNA hsa-miR-190b PIGT miRanda miRanda
14034 chr12 111064249 111064249 1 + C T CESC 111064248 + 111064228 111064268 41 CCACCTCAAAGAGTATTTGAACTTGTTGACCAGATTAATCC CCACCTCAAAGAGTATTTGAATTTGTTGACCAGATTAATCC Direct Loss 1 0.33615965805954 1 0.0311955511569977 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111064248 chr12:111064249 nonsynonymous SNV 0.977 3 hm6A_associated_SNPs_29668 0 0 1 1 111064236 111064258 mRNA hsa-miR-505 TCTN1 miRanda miRanda
14034 chr12 111064249 111064249 1 + C T CESC 111064256 + 111064236 111064276 41 AAGAGTATTTGAACTTGTTGACCAGATTAATCCATCTATTT AAGAGTATTTGAATTTGTTGACCAGATTAATCCATCTATTT < 41bp 1 0.183985670403018 1 0.0232144892215729 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111064256 chr12:111064249 nonsynonymous SNV 0.977 3 hm6A_associated_SNPs_29669 0 0 1 1 111064236 111064258 mRNA hsa-miR-505 TCTN1 miRanda miRanda
14034 chr21 30699110 30699110 1 + C G CESC 30699092 + 30699072 30699112 41 CCCCCACAATTCTTCCATAGACCCTCATGGACTTTATTCTT CCCCCACAATTCTTCCATAGACCCTCATGGACTTTATTGTT < 41bp 1 0.57195916481056 1 0.987237691879272 experiment 0.856081670378879 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699092 chr21:30699110 nonsynonymous SNV 0.981 2 hm6A_associated_SNPs_29674 0 0 1 1 30699091 30699114 mRNA hsa-miR-186 BACH1 miRanda miRanda
14034 chr1 12438532 12438532 1 + G A CESC 12438515 + 12438495 12438535 41 GTTCTCAGCTGTGGAGGATGACAGGAACAGGAATGCTGGCC GTTCTCAGCTGTGGAGGATGACAGGAACAGGAATGCTAGCC < 41bp 1 0.246644734923339 1 0.85086053609848 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 38 VPS13D ENSG00000048707 CDS Human protein_coding chr1:12438515 chr1:12438532 synonymous SNV . 0 hm6A_associated_SNPs_29724 0 0 1 1 12438532 12438558 mRNA hsa-miR-146a VPS13D miRanda miRanda
14034 chr12 112460219 112460219 1 + G C CESC 112460230 + 112460210 112460250 41 CTTGAAGCAGGGGCAAGATAACCTCTCAAGTGTGAAGGAGA CTTGAAGCACGGGCAAGATAACCTCTCAAGTGTGAAGGAGA < 41bp 1 0.400444624485136 1 0.970248341560364 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460230 chr12:112460219 nonsynonymous SNV 0.687 1 hm6A_associated_SNPs_29727 0 0 1 1 112460215 112460234 mRNA hsa-miR-154 ERP29 miRanda miRanda
14034 chr2 71635303 71635303 1 + C T CESC 71635308 + 71635288 71635328 41 TCAATGTATAGCTTTCTGAAACAAAATCCACAAAATATTGG TCAATGTATAGCTTTTTGAAACAAAATCCACAAAATATTGG < 41bp 1 0.782555666255536 1 0.0853027999401093 experiment 0.434888667488928 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 16 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71635308 chr2:71635303 synonymous SNV . 0 hm6A_associated_SNPs_29777 0 0 1 1 71635295 71635317 mRNA hsa-miR-876-5p ZNF638 miRanda miRanda
14034 chr11 62650390 62650390 1 + C G CESC 62650398 + 62650378 62650418 41 AGGCATCCGTGTCATTCTGGACCTTACTCCCAACTACCGGG AGGCATCCGTGTGATTCTGGACCTTACTCCCAACTACCGGG < 41bp 1 0.155193347721414 1 0.17553699016571 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62650398 chr11:62650390 synonymous SNV . 0 hm6A_associated_SNPs_29787 0 0 1 1 62650370 62650393 mRNA hsa-miR-425 SLC3A2 miRanda miRanda
14034 chr12 53346617 53346617 1 + G A CESC 53346604 + 53346584 53346624 41 AGTGGTGTCTGAGACCAATGACACCAAAGTTCTGAGGCATT AGTGGTGTCTGAGACCAATGACACCAAAGTTCTAAGGCATT < 41bp 1 0.632340752816456 1 0.67557418346405 experiment 0.735318494367087 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 KRT18 ENSG00000111057;ENSG00000225410 exonic;splicing Human other chr12:53346604 chr12:53346617 synonymous SNV . 0 hm6A_associated_SNPs_29802 0 0 1 1 53346600 53346620 mRNA hsa-miR-371-5p KRT18 miRanda miRanda
14034 chr12 53346594 53346594 1 + G C CESC 53346604 + 53346584 53346624 41 AGTGGTGTCTGAGACCAATGACACCAAAGTTCTGAGGCATT AGTGGTGTCTCAGACCAATGACACCAAAGTTCTGAGGCATT < 41bp 1 0.62872444500386 1 0.61577844619751 experiment 0.742551109992281 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 KRT18 ENSG00000111057 CDS Human protein_coding chr12:53346604 chr12:53346594 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_29805 0 0 1 1 53346591 53346613 mRNA hsa-miR-9 KRT18 miRanda miRanda
14034 chr19 579536 579536 1 + C G CESC 579527 + 579507 579547 41 AGTCTTCACTACCGTAGAAGACCTTGGCTCCAAGATACTCC AGTCTTCACTACCGTAGAAGACCTTGGCTGCAAGATACTCC < 41bp 1 0.673659317169653 1 0.927450299263 experiment 0.652681365660694 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 BSG ENSG00000172270 CDS Human protein_coding chr19:579527 chr19:579536 nonsynonymous SNV 0.015 3 hm6A_associated_SNPs_29831 0 0 1 1 579531 579555 mRNA hsa-miR-125a-3p BSG miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACCATGATTGAAACACACTTA < 41bp 1 0.562587053219402 1 0.94977605342865 experiment 0.874825893561197 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29839 0 0 1 5 71654519 71654539 mRNA hsa-miR-187 ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACCATGATTGAAACACACTTA < 41bp 1 0.562587053219402 1 0.94977605342865 experiment 0.874825893561197 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29839 0 0 1 5 71654518 71654540 mRNA hsa-miR-302a ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACCATGATTGAAACACACTTA < 41bp 1 0.562587053219402 1 0.94977605342865 experiment 0.874825893561197 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29839 0 0 1 5 71654511 71654540 mRNA hsa-miR-302b ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACCATGATTGAAACACACTTA < 41bp 1 0.562587053219402 1 0.94977605342865 experiment 0.874825893561197 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29839 0 0 1 5 71654516 71654540 mRNA hsa-miR-373 ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATCTAAAAACCATGATTGAAACACACTTA < 41bp 1 0.562587053219402 1 0.94977605342865 experiment 0.874825893561197 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29839 0 0 1 5 71654519 71654540 mRNA hsa-miR-520d-3p ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACCATGATTGAAACACACTTAACAGGTAGATACTT Direct Loss 1 0.765123438270647 1 0.860237836837769 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29840 0 0 1 5 71654519 71654539 mRNA hsa-miR-187 ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACCATGATTGAAACACACTTAACAGGTAGATACTT Direct Loss 1 0.765123438270647 1 0.860237836837769 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29840 0 0 1 5 71654518 71654540 mRNA hsa-miR-302a ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACCATGATTGAAACACACTTAACAGGTAGATACTT Direct Loss 1 0.765123438270647 1 0.860237836837769 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29840 0 0 1 5 71654511 71654540 mRNA hsa-miR-302b ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACCATGATTGAAACACACTTAACAGGTAGATACTT Direct Loss 1 0.765123438270647 1 0.860237836837769 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29840 0 0 1 5 71654516 71654540 mRNA hsa-miR-373 ZNF638 miRanda miRanda
14034 chr2 71654533 71654533 1 + G C CESC 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT CTAAAAACCATGATTGAAACACACTTAACAGGTAGATACTT Direct Loss 1 0.765123438270647 1 0.860237836837769 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654533 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_29840 0 0 1 5 71654519 71654540 mRNA hsa-miR-520d-3p ZNF638 miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676214 95676240 mRNA hsa-let-7a VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676220 95676240 mRNA hsa-let-7b VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676215 95676240 mRNA hsa-let-7c VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676214 95676240 mRNA hsa-let-7d VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676220 95676240 mRNA hsa-let-7e VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676214 95676240 mRNA hsa-let-7f VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676215 95676240 mRNA hsa-miR-98 VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676220 95676240 mRNA hsa-let-7g VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676220 95676240 mRNA hsa-let-7i VEZT miRanda miRanda
14034 chr12 95676223 95676223 1 + G A CESC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTAACTCAAGGTCTACCTCATGCT < 41bp 1 0.286977277472392 1 0.0881516933441162 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676223 synonymous SNV . 0 hm6A_associated_SNPs_29848 0 0 1 10 95676218 95676238 mRNA hsa-miR-379 VEZT miRanda miRanda
14034 chr1 145281380 145281380 1 + C T CESC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCTAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0741823398810268 1 0.211798995733261 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281380 stopgain 0.951 0 hm6A_associated_SNPs_29872 0 0 1 2 145281369 145281383 mRNA hsa-miR-96 NOTCH2NL miRanda miRanda
14034 chr1 145281380 145281380 1 + C T CESC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCTAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0741823398810268 1 0.211798995733261 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281380 stopgain 0.951 0 hm6A_associated_SNPs_29872 0 0 1 2 145281369 145281383 mRNA hsa-miR-1271 NOTCH2NL miRanda miRanda
14034 chr1 60294516 60294516 1 + A C CESC 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGATGTTGGGGACAACTGGCGAATAAAGGTAT < 41bp 1 0.554707263582854 1 0.0982968807220459 experiment 0.890585472834293 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 29 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294516 synonymous SNV . 0 hm6A_associated_SNPs_29877 0 0 1 3 60294492 60294516 mRNA hsa-miR-199a-5p HOOK1 miRanda miRanda
14034 chr1 60294516 60294516 1 + A C CESC 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGATGTTGGGGACAACTGGCGAATAAAGGTAT < 41bp 1 0.554707263582854 1 0.0982968807220459 experiment 0.890585472834293 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 29 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294516 synonymous SNV . 0 hm6A_associated_SNPs_29877 0 0 1 3 60294510 60294524 mRNA hsa-miR-193a-3p HOOK1 miRanda miRanda
14034 chr1 60294516 60294516 1 + A C CESC 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGATGTTGGGGACAACTGGCGAATAAAGGTAT < 41bp 1 0.554707263582854 1 0.0982968807220459 experiment 0.890585472834293 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 29 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294516 synonymous SNV . 0 hm6A_associated_SNPs_29877 0 0 1 3 60294510 60294524 mRNA hsa-miR-193b HOOK1 miRanda miRanda
14034 chr18 32823228 32823228 1 + C T CESC 32823215 + 32823195 32823235 41 TCCACCTCCAGCCCTTAAAGACACAGCTGAAATCCTGGAAA TCCACCTCCAGCCCTTAAAGACACAGCTGAAATTCTGGAAA < 41bp 1 0.776710902764928 1 0.840845584869385 experiment 0.446578194470144 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 ZNF397 ENSG00000186812 CDS Human protein_coding chr18:32823215 chr18:32823228 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_29881 0 0 1 1 32823208 32823230 mRNA hsa-miR-876-5p ZNF397 miRanda miRanda
14034 chr3 152018065 152018065 1 + C G CESC 152018058 + 152018038 152018078 41 GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACACG GTAGAGAGTTCCAGAGGGGGACTTGCTGACGGCCAGACACG < 41bp 1 0.566429439440333 1 0.911864995956421 experiment 0.867141121119333 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018058 chr3:152018065 stopgain 1.000 1 hm6A_associated_SNPs_29882 0 0 1 1 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr3 152018065 152018065 1 + C G CESC 152018074 + 152018054 152018094 41 GGGGACTTGCTCACGGCCAGACACGGAATGTAAATTTGCAC GGGGACTTGCTGACGGCCAGACACGGAATGTAAATTTGCAC < 41bp 1 0.700055684668717 1 0.820084571838379 experiment 0.599888630662567 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018074 chr3:152018065 stopgain 1.000 1 hm6A_associated_SNPs_29883 0 0 1 1 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr8 11695907 11695907 1 + G C CESC 11695922 + 11695902 11695942 41 TCATAGAATCCCCGACTCAGACCCATCTTCTAGCAAAACAA TCATACAATCCCCGACTCAGACCCATCTTCTAGCAAAACAA < 41bp 1 0.373005092690947 1 0.265256643295288 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11695922 chr8:11695907 nonsynonymous SNV 0.346 2 hm6A_associated_SNPs_29912 0 0 1 1 11695897 11695909 mRNA hsa-miR-433 FDFT1 miRanda miRanda
14034 chr8 141525317 141525317 1 + G C CESC 141525324 + 141525304 141525344 41 TGACAATGATAATGAAAGTGACCATGATGAAGCTGACTCCT TGACAATGATAATCAAAGTGACCATGATGAAGCTGACTCCT < 41bp 1 0.769472262097553 1 0.988360106945038 experiment 0.461055475804894 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 CHRAC1 ENSG00000104472 CDS Human protein_coding chr8:141525324 chr8:141525317 nonsynonymous SNV 0.155 0 hm6A_associated_SNPs_29920 0 0 1 1 141525316 141525338 mRNA hsa-miR-21 CHRAC1 miRanda miRanda
14034 chr19 54647449 54647449 1 + G C CESC 54647463 + 54647443 54647483 41 GGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGA GGACAACAGGCAGCTTATAGACAACCGCAAGCTCATTGAGA < 41bp 1 0.744454840814636 1 0.945497930049896 experiment 0.511090318370728 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 7 CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54647463 chr19:54647449 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_29944 0 0 1 1 54647437 54647458 mRNA hsa-miR-22 CNOT3 miRanda miRanda
14034 chr3 186503748 186503748 1 + G C CESC 186503764 + 186503744 186503784 41 GTTCGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA GTTCCAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA < 41bp 1 0.343092713367832 1 0.901250243186951 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503764 chr3:186503748 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_29947 0 0 1 1 186503745 186503765 mRNA hsa-miR-129-5p EIF4A2 miRanda miRanda
14034 chrX 73046913 73046913 1 - C G CESC 73046895 - 73046875 73046915 41 CAGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA CACATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA < 41bp 1 0.509140158271168 1 0.552412033081055 experiment 0.981719683457665 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046895 chrX:73046913 . . 0 hm6A_associated_SNPs_29976 0 0 1 3 73046902 73046921 lncRNA hsa-miR-371a-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046895 - 73046875 73046915 41 CAGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA CACATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA < 41bp 1 0.509140158271168 1 0.552412033081055 experiment 0.981719683457665 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046895 chrX:73046913 . . 0 hm6A_associated_SNPs_29976 0 0 1 3 73046894 73046920 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046895 - 73046875 73046915 41 CAGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA CACATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA < 41bp 1 0.509140158271168 1 0.552412033081055 experiment 0.981719683457665 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046895 chrX:73046913 . . 0 hm6A_associated_SNPs_29976 0 0 1 3 73046894 73046915 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046902 - 73046882 73046922 41 TATAAGACAGATGGTTTGAGACTTGAGACCCGAGGACTAAG TATAAGACACATGGTTTGAGACTTGAGACCCGAGGACTAAG < 41bp 1 0.687221040786887 1 0.761402130126953 experiment 0.625557918426226 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046902 chrX:73046913 . . 0 hm6A_associated_SNPs_29977 0 0 1 3 73046902 73046921 lncRNA hsa-miR-371a-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046902 - 73046882 73046922 41 TATAAGACAGATGGTTTGAGACTTGAGACCCGAGGACTAAG TATAAGACACATGGTTTGAGACTTGAGACCCGAGGACTAAG < 41bp 1 0.687221040786887 1 0.761402130126953 experiment 0.625557918426226 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046902 chrX:73046913 . . 0 hm6A_associated_SNPs_29977 0 0 1 3 73046894 73046920 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046902 - 73046882 73046922 41 TATAAGACAGATGGTTTGAGACTTGAGACCCGAGGACTAAG TATAAGACACATGGTTTGAGACTTGAGACCCGAGGACTAAG < 41bp 1 0.687221040786887 1 0.761402130126953 experiment 0.625557918426226 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046902 chrX:73046913 . . 0 hm6A_associated_SNPs_29977 0 0 1 3 73046894 73046915 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046916 - 73046896 73046936 41 TAGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAG TAGAAGGCCCAAAGTATAAGACACATGGTTTGAGACTTGAG < 41bp 1 0.750798211310856 1 0.36629843711853 experiment 0.498403577378287 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046916 chrX:73046913 . . 0 hm6A_associated_SNPs_29978 0 0 1 3 73046902 73046921 lncRNA hsa-miR-371a-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046916 - 73046896 73046936 41 TAGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAG TAGAAGGCCCAAAGTATAAGACACATGGTTTGAGACTTGAG < 41bp 1 0.750798211310856 1 0.36629843711853 experiment 0.498403577378287 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046916 chrX:73046913 . . 0 hm6A_associated_SNPs_29978 0 0 1 3 73046894 73046920 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046913 73046913 1 - C G CESC 73046916 - 73046896 73046936 41 TAGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAG TAGAAGGCCCAAAGTATAAGACACATGGTTTGAGACTTGAG < 41bp 1 0.750798211310856 1 0.36629843711853 experiment 0.498403577378287 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046916 chrX:73046913 . . 0 hm6A_associated_SNPs_29978 0 0 1 3 73046894 73046915 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chr1 52117690 52117690 1 + C T CESC 52117670 + 52117650 52117690 41 GTTTTTCTTTTAGTCCAAGGACAAAATGATGAGAGGCTCTC GTTTTTCTTTTAGTCCAAGGACAAAATGATGAGAGGCTCTT < 41bp 1 0.668364583451834 1 0.188941806554794 experiment 0.663270833096332 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52117670 chr1:52117690 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_29980 0 0 1 1 52117682 52117704 mRNA hsa-miR-362-3p OSBPL9 miRanda miRanda
14034 chr18 32398254 32398254 1 + C G CESC 32398240 + 32398220 32398260 41 CAGGACTGCTTCTGGAGGGGACATGCCGGTGGTTCTCATAG CAGGACTGCTTCTGGAGGGGACATGCCGGTGGTTGTCATAG < 41bp 1 0.503416448448726 1 0.682517766952515 experiment 0.993167103102548 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 DTNA ENSG00000134769 CDS Human protein_coding chr18:32398240 chr18:32398254 nonsynonymous SNV 0.998 5 hm6A_associated_SNPs_30021 0 0 1 1 32398242 32398269 mRNA hsa-miR-138 DTNA miRanda miRanda
14034 chr22 45210624 45210624 1 + G A CESC 45210617 + 45210597 45210637 41 CTTCATCAAGGTCCTGTGGAACATCTTGAAGCCCCTCATCA CTTCATCAAGGTCCTGTGGAACATCTTAAAGCCCCTCATCA < 41bp 1 0.223443283323667 1 0.905819177627563 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45210617 chr22:45210624 nonsynonymous SNV . 0 hm6A_associated_SNPs_30067 0 0 0 1 45210623 45210638 mRNA hsa-miR-134 ARHGAP8 miRanda miRanda
14034 chr15 43481428 43481428 1 + C G CESC 43481417 + 43481397 43481437 41 GAAACCCAGAAGTTCTGTGAACAAGTCCATGCTGCCATCAA GAAACCCAGAAGTTCTGTGAACAAGTCCATGGTGCCATCAA < 41bp 1 0.702407966469529 1 0.00676536560058594 experiment 0.595184067060942 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43481417 chr15:43481428 nonsynonymous SNV 0.893 0 hm6A_associated_SNPs_30132 0 0 1 2 43481403 43481432 mRNA hsa-miR-103 CCNDBP1 miRanda miRanda
14034 chr15 43481428 43481428 1 + C G CESC 43481417 + 43481397 43481437 41 GAAACCCAGAAGTTCTGTGAACAAGTCCATGCTGCCATCAA GAAACCCAGAAGTTCTGTGAACAAGTCCATGGTGCCATCAA < 41bp 1 0.702407966469529 1 0.00676536560058594 experiment 0.595184067060942 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43481417 chr15:43481428 nonsynonymous SNV 0.893 0 hm6A_associated_SNPs_30132 0 0 1 2 43481403 43481432 mRNA hsa-miR-107 CCNDBP1 miRanda miRanda
14034 chr8 48875552 48875552 1 + C G CESC 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGTGAACTGTGAACACATGAAATCAT < 41bp 1 0.252013780522531 1 0.876713931560516 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875552 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_30161 0 0 1 3 48875550 48875570 mRNA hsa-miR-129-5p MCM4 miRanda miRanda
14034 chr8 48875552 48875552 1 + C G CESC 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGTGAACTGTGAACACATGAAATCAT < 41bp 1 0.252013780522531 1 0.876713931560516 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875552 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_30161 0 0 1 3 48875533 48875553 mRNA hsa-miR-190 MCM4 miRanda miRanda
14034 chr8 48875552 48875552 1 + C G CESC 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGTGAACTGTGAACACATGAAATCAT < 41bp 1 0.252013780522531 1 0.876713931560516 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875552 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_30161 0 0 1 3 48875550 48875569 mRNA hsa-miR-599 MCM4 miRanda miRanda
14034 chr8 48875552 48875552 1 + C G CESC 48875563 + 48875543 48875583 41 TGAACACATCAAATCATTTGACAAAAATTTGTACAGACAAC TGAACACATGAAATCATTTGACAAAAATTTGTACAGACAAC < 41bp 1 0.633064245883418 1 0.534601032733917 experiment 0.733871508233164 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875563 chr8:48875552 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_30162 0 0 1 3 48875550 48875570 mRNA hsa-miR-129-5p MCM4 miRanda miRanda
14034 chr8 48875552 48875552 1 + C G CESC 48875563 + 48875543 48875583 41 TGAACACATCAAATCATTTGACAAAAATTTGTACAGACAAC TGAACACATGAAATCATTTGACAAAAATTTGTACAGACAAC < 41bp 1 0.633064245883418 1 0.534601032733917 experiment 0.733871508233164 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875563 chr8:48875552 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_30162 0 0 1 3 48875533 48875553 mRNA hsa-miR-190 MCM4 miRanda miRanda
14034 chr8 48875552 48875552 1 + C G CESC 48875563 + 48875543 48875583 41 TGAACACATCAAATCATTTGACAAAAATTTGTACAGACAAC TGAACACATGAAATCATTTGACAAAAATTTGTACAGACAAC < 41bp 1 0.633064245883418 1 0.534601032733917 experiment 0.733871508233164 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875563 chr8:48875552 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_30162 0 0 1 3 48875550 48875569 mRNA hsa-miR-599 MCM4 miRanda miRanda
14034 chrX 73046776 73046776 1 - C T CESC 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCGAAGGCCTAAGTTGGATG < 41bp 1 0.54137588279085 1 0.647090554237366 experiment 0.9172482344183 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046776 . . 0 hm6A_associated_SNPs_30203 0 0 1 3 73046776 73046796 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046776 73046776 1 - C T CESC 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCGAAGGCCTAAGTTGGATG < 41bp 1 0.54137588279085 1 0.647090554237366 experiment 0.9172482344183 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046776 . . 0 hm6A_associated_SNPs_30203 0 0 1 3 73046776 73046797 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046776 73046776 1 - C T CESC 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCGAAGGCCTAAGTTGGATG < 41bp 1 0.54137588279085 1 0.647090554237366 experiment 0.9172482344183 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046776 . . 0 hm6A_associated_SNPs_30203 0 0 1 3 73046772 73046795 lncRNA hsa-miR-510-5p XIST miRanda starBase2
14034 chrX 48759680 48759680 1 + C A CESC 48759666 + 48759646 48759686 41 GCGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACA GCGTGGCTATGACAAGGTAGACAGAGAGAGAGAGAGAGACA < 41bp 1 0.488957462691912 1 0.967445850372314 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759666 chrX:48759680 synonymous SNV . 0 hm6A_associated_SNPs_30205 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759680 48759680 1 + C A CESC 48759684 + 48759664 48759704 41 AGACAGAGAGAGAGAGCGAGACAGGGAACGGGATCGGGACC AGACAGAGAGAGAGAGAGAGACAGGGAACGGGATCGGGACC < 41bp 1 0.373500119742571 1 0.98720520734787 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759684 chrX:48759680 synonymous SNV . 0 hm6A_associated_SNPs_30206 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chr1 38265771 38265771 1 + C T CESC 38265762 + 38265742 38265782 41 AGAAGGCCATTCCCAAGAAGACACCCACCCGCCTGTATTTG AGAAGGCCATTCCCAAGAAGACACCCACCTGCCTGTATTTG < 41bp 1 0.71627868198118 1 0.988701581954956 experiment 0.56744263603764 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 30 MANEAL ENSG00000185090 CDS Human protein_coding chr1:38265762 chr1:38265771 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_30254 0 0 1 2 38265769 38265791 mRNA hsa-miR-196a MANEAL miRanda miRanda
14034 chr1 38265771 38265771 1 + C T CESC 38265762 + 38265742 38265782 41 AGAAGGCCATTCCCAAGAAGACACCCACCCGCCTGTATTTG AGAAGGCCATTCCCAAGAAGACACCCACCTGCCTGTATTTG < 41bp 1 0.71627868198118 1 0.988701581954956 experiment 0.56744263603764 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 30 MANEAL ENSG00000185090 CDS Human protein_coding chr1:38265762 chr1:38265771 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_30254 0 0 1 2 38265770 38265791 mRNA hsa-miR-196b MANEAL miRanda miRanda
14034 chr10 70531119 70531119 1 + G A CESC 70531128 + 70531108 70531148 41 AAGAAGAAAGAGATGATGAAACTGATGAACCAAAACCCAAA AAGAAGAAAGAAATGATGAAACTGATGAACCAAAACCCAAA < 41bp 1 0.371952521607459 1 0.938222527503967 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70531128 chr10:70531119 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_30358 0 0 1 1 70531102 70531123 mRNA hsa-miR-216b CCAR1 miRanda miRanda
14034 chr2 74173878 74173878 1 + G A CESC 74173871 + 74173851 74173891 41 CACTGCCCAAAGTCTTGGAAACTTGCTGGATATGATGTACC CACTGCCCAAAGTCTTGGAAACTTGCTAGATATGATGTACC < 41bp 1 0.167371056608102 1 0.321040630340576 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 DGUOK ENSG00000114956 CDS Human protein_coding chr2:74173871 chr2:74173878 nonsynonymous SNV 0.993 0 hm6A_associated_SNPs_30365 0 0 1 1 74173878 74173901 mRNA hsa-miR-149 DGUOK miRanda miRanda
14034 chr16 24231365 24231365 1 + C T CESC 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTCATTATGAACTTGGA < 41bp 1 0.453372887480627 1 0.960274815559387 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231365 synonymous SNV . 0 hm6A_associated_SNPs_30423 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231365 24231365 1 + C T CESC 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTCATTATGAACTTGGA < 41bp 1 0.453372887480627 1 0.960274815559387 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231365 synonymous SNV . 0 hm6A_associated_SNPs_30423 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr16 24231365 24231365 1 + C T CESC 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTCATTATGAACTTGGA < 41bp 1 0.453372887480627 1 0.960274815559387 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231365 synonymous SNV . 0 hm6A_associated_SNPs_30423 0 0 1 3 24231346 24231370 mRNA hsa-miR-433 PRKCB miRanda miRanda
14034 chr16 24231365 24231365 1 + C T CESC 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATTATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.54650492818892 1 0.971063792705536 experiment 0.90699014362216 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231365 synonymous SNV . 0 hm6A_associated_SNPs_30424 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231365 24231365 1 + C T CESC 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATTATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.54650492818892 1 0.971063792705536 experiment 0.90699014362216 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231365 synonymous SNV . 0 hm6A_associated_SNPs_30424 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr16 24231365 24231365 1 + C T CESC 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATTATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.54650492818892 1 0.971063792705536 experiment 0.90699014362216 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231365 synonymous SNV . 0 hm6A_associated_SNPs_30424 0 0 1 3 24231346 24231370 mRNA hsa-miR-433 PRKCB miRanda miRanda
14034 chr11 65268625 65268625 1 + T G CHOL 65268612 + 65268592 65268632 41 TTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACC TTCAGTTTTGTGAATAGATGACCTGTTTTTACTGCCTCACC < 41bp 1 0.0229123945231737 1 0.583129107952118 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 34 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268612 chr11:65268625 . . 0 hm6A_associated_SNPs_30457 0 0 1 1 65268616 65268639 lncRNA hsa-miR-506-5p MALAT1 miRanda starBase2
14034 chr9 74526743 74526743 1 + G A CHOL 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTAC < 41bp 1 0.514253584869794 1 0.779515504837036 experiment 0.971492830260412 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526743 nonsynonymous SNV . 0 hm6A_associated_SNPs_30463 0 0 1 6 74526736 74526752 mRNA hsa-miR-141 C9orf85 miRanda miRanda
14034 chr9 74526743 74526743 1 + G A CHOL 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTAC < 41bp 1 0.514253584869794 1 0.779515504837036 experiment 0.971492830260412 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526743 nonsynonymous SNV . 0 hm6A_associated_SNPs_30463 0 0 1 6 74526736 74526752 mRNA hsa-miR-200a C9orf85 miRanda miRanda
14034 chr9 74526743 74526743 1 + G A CHOL 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTAC < 41bp 1 0.514253584869794 1 0.779515504837036 experiment 0.971492830260412 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526743 nonsynonymous SNV . 0 hm6A_associated_SNPs_30463 0 0 1 6 74526727 74526749 mRNA hsa-miR-346 C9orf85 miRanda miRanda
14034 chr9 74526743 74526743 1 + G A CHOL 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTAC < 41bp 1 0.514253584869794 1 0.779515504837036 experiment 0.971492830260412 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526743 nonsynonymous SNV . 0 hm6A_associated_SNPs_30463 0 0 1 6 74526742 74526752 mRNA hsa-miR-494 C9orf85 miRanda miRanda
14034 chr9 74526743 74526743 1 + G A CHOL 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTAC < 41bp 1 0.514253584869794 1 0.779515504837036 experiment 0.971492830260412 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526743 nonsynonymous SNV . 0 hm6A_associated_SNPs_30463 0 0 1 6 74526726 74526749 mRNA hsa-miR-544 C9orf85 miRanda miRanda
14034 chr9 74526743 74526743 1 + G A CHOL 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTAC < 41bp 1 0.514253584869794 1 0.779515504837036 experiment 0.971492830260412 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 40 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526743 nonsynonymous SNV . 0 hm6A_associated_SNPs_30463 0 0 1 6 74526743 74526752 mRNA hsa-miR-543 C9orf85 miRanda miRanda
14034 chr11 65268621 65268621 1 + T C CHOL 65268612 + 65268592 65268632 41 TTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACC TTCAGTTTTGTGAATAGATGACCTGTTTTCACTTCCTCACC < 41bp 1 0.0220322128877871 1 0.472023844718933 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268612 chr11:65268621 . . 0 hm6A_associated_SNPs_30476 0 0 1 1 65268616 65268639 lncRNA hsa-miR-506-5p MALAT1 miRanda starBase2
14034 chrX 155255043 155255043 1 + G A CHOL 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGACTCCATGACACCTTCCCCCCCAGACCCA < 41bp 1 0.324109515135672 1 0.988199472427368 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 13 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255043 . . 0 hm6A_associated_SNPs_30519 0 0 0 2 155255040 155255058 mRNA hsa-miR-18a WASH6P miRanda miRanda
14034 chrX 155255043 155255043 1 + G A CHOL 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGACTCCATGACACCTTCCCCCCCAGACCCA < 41bp 1 0.324109515135672 1 0.988199472427368 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 13 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255043 . . 0 hm6A_associated_SNPs_30519 0 0 0 2 155255040 155255058 mRNA hsa-miR-18b WASH6P miRanda miRanda
14034 chr20 2637855 2637855 1 + G A COAD 2637836 + 2637816 2637856 41 TGCCCTCGCGTCTTCAGAAAACAGCAGTAGTACTCCAGAGG TGCCCTCGCGTCTTCAGAAAACAGCAGTAGTACTCCAGAAG < 41bp 1 0.476569812750685 1 0.991631388664246 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 40 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637836 chr20:2637855 synonymous SNV . 0 hm6A_associated_SNPs_30530 0 0 1 1 2637843 2637864 mRNA hsa-miR-342-3p NOP56 miRanda miRanda
14034 chr2 202149860 202149860 1 + C T COAD 202149853 + 202149833 202149873 41 AGAAAGGTATACCTGTTGAGACTGATTCAGAGGAGCAACCC AGAAAGGTATACCTGTTGAGACTGATTTAGAGGAGCAACCC < 41bp 1 0.755616794535322 1 0.962227761745453 experiment 0.488766410929356 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149853 chr2:202149860 nonsynonymous SNV 0.033 0 hm6A_associated_SNPs_30532 0 0 1 1 202149854 202149875 mRNA hsa-miR-296-3p CASP8 miRanda miRanda
14034 chr1 151141517 151141517 1 + T C COAD 151141537 + 151141517 151141557 41 TTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGA CTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGA < 41bp 1 0.674196967245547 1 0.303247809410095 experiment 0.651606065508906 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151141537 chr1:151141517 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_30575 0 0 1 2 151141510 151141531 mRNA hsa-miR-376a SCNM1 miRanda miRanda
14034 chr1 151141517 151141517 1 + T C COAD 151141537 + 151141517 151141557 41 TTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGA CTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGA < 41bp 1 0.674196967245547 1 0.303247809410095 experiment 0.651606065508906 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151141537 chr1:151141517 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_30575 0 0 1 2 151141509 151141531 mRNA hsa-miR-376b SCNM1 miRanda miRanda
14034 chr1 53236941 53236941 1 + C T COAD 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTGAATTCATTAACTCTCTTCCTCGAGGATCCT < 41bp 1 0.698532055648716 1 0.934030055999756 experiment 0.602935888702568 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236941 nonsynonymous SNV 0.131 2 hm6A_associated_SNPs_30580 0 0 1 1 53236920 53236943 mRNA hsa-miR-185 ZYG11B miRanda miRanda
14034 chr22 22658344 22658344 1 + T C COAD 22658325 + 22658305 22658345 41 AAGAATGAAGATGTAGAGAAACAAGGAAGAAATTGACCCTG AAGAATGAAGATGTAGAGAAACAAGGAAGAAATTGACCCCG < 41bp 1 0.183668319054379 1 0.956214785575867 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 40 BMS1P20 ENSG00000236850;ENSG00000272779 ncRNA_exonic Human other chr22:22658325 chr22:22658344 . . 0 hm6A_associated_SNPs_30593 0 0 1 1 22658344 22658365 mRNA hsa-miR-1271 LOC96610 miRanda miRanda
14034 chr17 4805383 4805383 1 + C A COAD 4805369 + 4805349 4805389 41 GGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGG GGCGTCGTAGGCCACTCCGAACTGGCCATCAATAATGTGGG < 41bp 1 0.470205488442695 1 0.988832592964172 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 CHRNE ENSG00000108556 splicing Human protein_coding chr17:4805369 chr17:4805383 . 0.992 0 hm6A_associated_SNPs_30594 0 0 1 1 4805373 4805395 mRNA hsa-miR-615-3p C17orf107 miRanda miRanda
14034 chr12 72091276 72091276 1 + C A COAD 72091290 + 72091270 72091310 41 AAAGTTCTCCAAGACTGATAACAACCTGGGAGAAAGTTCCA AAAGTTATCCAAGACTGATAACAACCTGGGAGAAAGTTCCA < 41bp 1 0.694557912360131 1 0.0153849422931671 experiment 0.610884175279737 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 TMEM19 ENSG00000139291 CDS Human protein_coding chr12:72091290 chr12:72091276 nonsynonymous SNV 0.653 0 hm6A_associated_SNPs_30604 0 0 1 2 72091257 72091279 mRNA hsa-miR-146a TMEM19 miRanda miRanda
14034 chr12 72091276 72091276 1 + C A COAD 72091290 + 72091270 72091310 41 AAAGTTCTCCAAGACTGATAACAACCTGGGAGAAAGTTCCA AAAGTTATCCAAGACTGATAACAACCTGGGAGAAAGTTCCA < 41bp 1 0.694557912360131 1 0.0153849422931671 experiment 0.610884175279737 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 TMEM19 ENSG00000139291 CDS Human protein_coding chr12:72091290 chr12:72091276 nonsynonymous SNV 0.653 0 hm6A_associated_SNPs_30604 0 0 1 2 72091260 72091279 mRNA hsa-miR-146b-5p TMEM19 miRanda miRanda
14034 chr22 45258273 45258273 1 + A C COAD 45258286 + 45258266 45258306 41 CCCCTGAACATGTTCACTGAACTGCTGATCGAGTACTATGA CCCCTGACCATGTTCACTGAACTGCTGATCGAGTACTATGA < 41bp 1 0.684576668046996 1 0.969278454780579 experiment 0.630846663906007 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 8 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45258286 chr22:45258273 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_30630 0 0 1 1 45258260 45258282 mRNA hsa-miR-203 ARHGAP8 miRanda miRanda
14034 chr2 277042 277042 1 + G A COAD 277031 + 277011 277051 41 ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC ACCTGCAAAGCTAAAATTGAACTACTTGGGAACTATGATCC < 41bp 1 0.55943646206126 1 0.937386393547058 experiment 0.881127075877481 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 32 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277031 chr2:277042 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_30655 0 0 1 1 277022 277043 mRNA hsa-miR-150 ACP1 miRanda miRanda
14034 chr2 277042 277042 1 + G A COAD 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAACTATGATCCACAAAAACAACTTATTATTGAAGATCC < 41bp 1 0.766790930005037 1 0.849090576171875 experiment 0.466418139989925 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277042 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_30656 0 0 1 1 277022 277043 mRNA hsa-miR-150 ACP1 miRanda miRanda
14034 chr5 126154710 126154710 1 + A C COAD 126154696 + 126154676 126154716 41 CTCTCGTCGCATGCTGACAGACAAAGAGAGAGAGATGGCGG CTCTCGTCGCATGCTGACAGACAAAGAGAGAGAGCTGGCGG < 41bp 1 0.779262364732009 1 0.905740737915039 experiment 0.441475270535981 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126154696 chr5:126154710 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_30672 0 0 1 1 126154705 126154727 mRNA hsa-miR-211 LMNB1 miRanda miRanda
14034 chr3 158369992 158369992 1 + A G COAD 158369981 + 158369961 158370001 41 TGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCT TGTGTTGCCAATTCAGATGAACAGCTTGGTGGGATGTTTCT < 41bp 1 0.682949958584787 1 0.677625596523285 experiment 0.634100082830425 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 32 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158369981 chr3:158369992 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_30700 0 0 1 2 158369981 158370001 mRNA hsa-miR-494 GFM1 miRanda miRanda
14034 chr3 158369992 158369992 1 + A G COAD 158369981 + 158369961 158370001 41 TGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCT TGTGTTGCCAATTCAGATGAACAGCTTGGTGGGATGTTTCT < 41bp 1 0.682949958584787 1 0.677625596523285 experiment 0.634100082830425 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 32 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158369981 chr3:158369992 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_30700 0 0 1 2 158369977 158369999 mRNA hsa-miR-543 GFM1 miRanda miRanda
14034 chr2 9618471 9618471 1 + C A COAD 9618485 + 9618465 9618505 41 AATTTTCTTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA AATTTTATTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA < 41bp 1 0.781116413943208 1 0.340943455696106 experiment 0.437767172113585 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 IAH1 ENSG00000134330 CDS Human protein_coding chr2:9618485 chr2:9618471 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_30731 0 0 1 4 9618470 9618495 mRNA hsa-miR-301a IAH1 miRanda miRanda
14034 chr2 9618471 9618471 1 + C A COAD 9618485 + 9618465 9618505 41 AATTTTCTTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA AATTTTATTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA < 41bp 1 0.781116413943208 1 0.340943455696106 experiment 0.437767172113585 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 IAH1 ENSG00000134330 CDS Human protein_coding chr2:9618485 chr2:9618471 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_30731 0 0 1 4 9618461 9618482 mRNA hsa-miR-328 IAH1 miRanda miRanda
14034 chr2 9618471 9618471 1 + C A COAD 9618485 + 9618465 9618505 41 AATTTTCTTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA AATTTTATTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA < 41bp 1 0.781116413943208 1 0.340943455696106 experiment 0.437767172113585 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 IAH1 ENSG00000134330 CDS Human protein_coding chr2:9618485 chr2:9618471 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_30731 0 0 1 4 9618468 9618495 mRNA hsa-miR-454 IAH1 miRanda miRanda
14034 chr2 9618471 9618471 1 + C A COAD 9618485 + 9618465 9618505 41 AATTTTCTTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA AATTTTATTTGGGGCCAATGACAGTGCACTAAAAGGTAAAA < 41bp 1 0.781116413943208 1 0.340943455696106 experiment 0.437767172113585 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 IAH1 ENSG00000134330 CDS Human protein_coding chr2:9618485 chr2:9618471 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_30731 0 0 1 4 9618470 9618495 mRNA hsa-miR-301b IAH1 miRanda miRanda
14034 chr13 48937070 48937070 1 + G T COAD 48937072 + 48937052 48937092 41 ATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGA ATTGAAGTTCTCTGTAAATAACATGAATGTAATATAGATGA < 41bp 1 0.477293675903914 1 0.013049840927124 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 RB1 ENSG00000139687 CDS Human protein_coding chr13:48937072 chr13:48937070 stopgain 1.000 1 hm6A_associated_SNPs_30733 0 0 1 6 48937058 48937082 mRNA hsa-miR-181a RB1 miRanda miRanda
14034 chr13 48937070 48937070 1 + G T COAD 48937072 + 48937052 48937092 41 ATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGA ATTGAAGTTCTCTGTAAATAACATGAATGTAATATAGATGA < 41bp 1 0.477293675903914 1 0.013049840927124 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 RB1 ENSG00000139687 CDS Human protein_coding chr13:48937072 chr13:48937070 stopgain 1.000 1 hm6A_associated_SNPs_30733 0 0 1 6 48937058 48937082 mRNA hsa-miR-181b RB1 miRanda miRanda
14034 chr13 48937070 48937070 1 + G T COAD 48937072 + 48937052 48937092 41 ATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGA ATTGAAGTTCTCTGTAAATAACATGAATGTAATATAGATGA < 41bp 1 0.477293675903914 1 0.013049840927124 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 RB1 ENSG00000139687 CDS Human protein_coding chr13:48937072 chr13:48937070 stopgain 1.000 1 hm6A_associated_SNPs_30733 0 0 1 6 48937058 48937082 mRNA hsa-miR-181c RB1 miRanda miRanda
14034 chr13 48937070 48937070 1 + G T COAD 48937072 + 48937052 48937092 41 ATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGA ATTGAAGTTCTCTGTAAATAACATGAATGTAATATAGATGA < 41bp 1 0.477293675903914 1 0.013049840927124 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 RB1 ENSG00000139687 CDS Human protein_coding chr13:48937072 chr13:48937070 stopgain 1.000 1 hm6A_associated_SNPs_30733 0 0 1 6 48937067 48937087 mRNA hsa-miR-410 RB1 miRanda miRanda
14034 chr13 48937070 48937070 1 + G T COAD 48937072 + 48937052 48937092 41 ATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGA ATTGAAGTTCTCTGTAAATAACATGAATGTAATATAGATGA < 41bp 1 0.477293675903914 1 0.013049840927124 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 RB1 ENSG00000139687 CDS Human protein_coding chr13:48937072 chr13:48937070 stopgain 1.000 1 hm6A_associated_SNPs_30733 0 0 1 6 48937061 48937082 mRNA hsa-miR-181d RB1 miRanda miRanda
14034 chr13 48937070 48937070 1 + G T COAD 48937072 + 48937052 48937092 41 ATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGA ATTGAAGTTCTCTGTAAATAACATGAATGTAATATAGATGA < 41bp 1 0.477293675903914 1 0.013049840927124 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 RB1 ENSG00000139687 CDS Human protein_coding chr13:48937072 chr13:48937070 stopgain 1.000 1 hm6A_associated_SNPs_30733 0 0 1 6 48937062 48937083 mRNA hsa-miR-543 RB1 miRanda miRanda
14034 chr1 82456626 82456626 1 + G A COAD 82456627 + 82456607 82456647 41 CAGCCCTGACATGGAAGAAGACCTCTCTCCCTCCAGGAGGA CAGCCCTGACATGGAAGAAAACCTCTCTCCCTCCAGGAGGA < 41bp 1 0.204782363983201 1 0.99650764465332 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 20 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456627 chr1:82456626 nonsynonymous SNV 0.992 1 hm6A_associated_SNPs_30761 0 0 1 1 82456616 82456637 mRNA hsa-miR-185 LPHN2 miRanda miRanda
14034 chr5 118729012 118729012 1 + T G COAD 118729016 + 118728996 118729036 41 AATCCTTTTGGGAATTTTAAACCCCACTTACAAAAACTATG AATCCTTTTGGGAATTGTAAACCCCACTTACAAAAACTATG < 41bp 1 0.680732959381283 1 0.990752935409546 experiment 0.638534081237433 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118729016 chr5:118729012 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_30789 0 0 1 1 118729002 118729023 mRNA hsa-miR-491-5p TNFAIP8 miRanda miRanda
14034 chr1 150461540 150461540 1 + T G COAD 150461523 + 150461503 150461543 41 GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTCG GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACAGTCG < 41bp 1 0.139152976166229 1 0.881347060203552 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 TARS2 ENSG00000143374 CDS Human protein_coding chr1:150461523 chr1:150461540 nonsynonymous SNV 0.900 4 hm6A_associated_SNPs_30854 0 0 1 2 150461532 150461555 mRNA hsa-miR-330-5p TARS2 miRanda miRanda
14034 chr1 150461540 150461540 1 + T G COAD 150461523 + 150461503 150461543 41 GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTCG GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACAGTCG < 41bp 1 0.139152976166229 1 0.881347060203552 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 TARS2 ENSG00000143374 CDS Human protein_coding chr1:150461523 chr1:150461540 nonsynonymous SNV 0.900 4 hm6A_associated_SNPs_30854 0 0 1 2 150461536 150461555 mRNA hsa-miR-326 TARS2 miRanda miRanda
14034 chr15 34522005 34522005 1 + G A COAD 34521990 + 34521970 34522010 41 GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCCTGG GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCACCTGG < 41bp 1 0.752143203520462 1 0.192734360694885 experiment 0.495713592959075 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 36 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521990 chr15:34522005 nonsynonymous SNV 0.656 0 hm6A_associated_SNPs_30874 0 0 1 3 34522000 34522020 mRNA hsa-miR-376c TMEM85 miRanda miRanda
14034 chr15 34522005 34522005 1 + G A COAD 34521990 + 34521970 34522010 41 GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCCTGG GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCACCTGG < 41bp 1 0.752143203520462 1 0.192734360694885 experiment 0.495713592959075 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 36 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521990 chr15:34522005 nonsynonymous SNV 0.656 0 hm6A_associated_SNPs_30874 0 0 1 3 34521997 34522022 mRNA hsa-miR-381 TMEM85 miRanda miRanda
14034 chr15 34522005 34522005 1 + G A COAD 34521990 + 34521970 34522010 41 GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCCTGG GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCACCTGG < 41bp 1 0.752143203520462 1 0.192734360694885 experiment 0.495713592959075 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 36 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521990 chr15:34522005 nonsynonymous SNV 0.656 0 hm6A_associated_SNPs_30874 0 0 1 3 34521997 34522022 mRNA hsa-miR-300 TMEM85 miRanda miRanda
14034 chr1 112251804 112251804 1 + A G COAD 112251791 + 112251771 112251811 41 ATATTTTATGACCTGGTCAGACAGATAAATAGGAAAACACC ATATTTTATGACCTGGTCAGACAGATAAATAGGGAAACACC < 41bp 1 0.672565868357642 1 0.101064085960388 experiment 0.654868263284716 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 RAP1A ENSG00000116473 CDS Human protein_coding chr1:112251791 chr1:112251804 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_30902 0 0 1 2 112251793 112251815 mRNA hsa-miR-138 RAP1A miRanda miRanda
14034 chr1 112251804 112251804 1 + A G COAD 112251791 + 112251771 112251811 41 ATATTTTATGACCTGGTCAGACAGATAAATAGGAAAACACC ATATTTTATGACCTGGTCAGACAGATAAATAGGGAAACACC < 41bp 1 0.672565868357642 1 0.101064085960388 experiment 0.654868263284716 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 RAP1A ENSG00000116473 CDS Human protein_coding chr1:112251791 chr1:112251804 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_30902 0 0 1 2 112251787 112251806 mRNA hsa-miR-384 RAP1A miRanda miRanda
14034 chr1 112251804 112251804 1 + A G COAD 112251807 + 112251787 112251827 41 TCAGACAGATAAATAGGAAAACACCAGTGGAAAAGAAGAAG TCAGACAGATAAATAGGGAAACACCAGTGGAAAAGAAGAAG < 41bp 1 0.62177321985217 1 0.266254425048828 experiment 0.756453560295659 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 RAP1A ENSG00000116473 CDS Human protein_coding chr1:112251807 chr1:112251804 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_30903 0 0 1 2 112251793 112251815 mRNA hsa-miR-138 RAP1A miRanda miRanda
14034 chr1 112251804 112251804 1 + A G COAD 112251807 + 112251787 112251827 41 TCAGACAGATAAATAGGAAAACACCAGTGGAAAAGAAGAAG TCAGACAGATAAATAGGGAAACACCAGTGGAAAAGAAGAAG < 41bp 1 0.62177321985217 1 0.266254425048828 experiment 0.756453560295659 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 RAP1A ENSG00000116473 CDS Human protein_coding chr1:112251807 chr1:112251804 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_30903 0 0 1 2 112251787 112251806 mRNA hsa-miR-384 RAP1A miRanda miRanda
14034 chr12 6837397 6837397 1 + C T COAD 6837415 + 6837395 6837435 41 CCCGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAG CCTGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAG < 41bp 1 0.689820331385735 1 0.0118768811225891 experiment 0.62035933722853 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 COPS7A ENSG00000111652 CDS Human protein_coding chr12:6837415 chr12:6837397 nonsynonymous SNV 0.987 3 hm6A_associated_SNPs_30912 0 0 1 1 6837389 6837397 mRNA hsa-miR-24 COPS7A miRanda miRanda
14034 chr7 45077975 45077975 1 + C T COAD 45077992 + 45077972 45078012 41 GAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGA GAGTGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGA < 41bp 1 0.330738599791335 1 0.949381947517395 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45077992 chr7:45077975 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_30939 0 0 1 1 45077966 45077988 mRNA hsa-miR-149 CCM2 miRanda miRanda
14034 chr12 108082507 108082507 1 + G C COAD 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGGTGACCCAGAGCATGACAGGACGCTTGATGATGATG < 41bp 1 0.75208351956884 1 0.929007291793823 experiment 0.495832960862321 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082507 nonsynonymous SNV 0.215 0 hm6A_associated_SNPs_30952 0 0 1 3 108082496 108082516 mRNA hsa-miR-205 PWP1 miRanda miRanda
14034 chr12 108082507 108082507 1 + G C COAD 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGGTGACCCAGAGCATGACAGGACGCTTGATGATGATG < 41bp 1 0.75208351956884 1 0.929007291793823 experiment 0.495832960862321 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082507 nonsynonymous SNV 0.215 0 hm6A_associated_SNPs_30952 0 0 1 3 108082486 108082507 mRNA hsa-miR-330-5p PWP1 miRanda miRanda
14034 chr12 108082507 108082507 1 + G C COAD 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGGTGACCCAGAGCATGACAGGACGCTTGATGATGATG < 41bp 1 0.75208351956884 1 0.929007291793823 experiment 0.495832960862321 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082507 nonsynonymous SNV 0.215 0 hm6A_associated_SNPs_30952 0 0 1 3 108082486 108082507 mRNA hsa-miR-326 PWP1 miRanda miRanda
14034 chr14 76621067 76621067 1 + G A COAD 76621050 + 76621030 76621070 41 ACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATGCAC ACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATACAC < 41bp 1 0.775639314177558 1 0.972352385520935 experiment 0.448721371644883 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76621050 chr14:76621067 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_30994 0 0 1 2 76621050 76621074 mRNA hsa-miR-18a C14orf118 miRanda miRanda
14034 chr14 76621067 76621067 1 + G A COAD 76621050 + 76621030 76621070 41 ACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATGCAC ACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATACAC < 41bp 1 0.775639314177558 1 0.972352385520935 experiment 0.448721371644883 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76621050 chr14:76621067 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_30994 0 0 1 2 76621050 76621074 mRNA hsa-miR-18b C14orf118 miRanda miRanda
14034 chr8 30614373 30614373 1 + C T COAD 30614363 + 30614343 30614383 41 AGAACTTGCCTAAACCTTTAACTGAATTTCCGTCTCCTGCT AGAACTTGCCTAAACCTTTAACTGAATTTCTGTCTCCTGCT < 41bp 1 0.0697933711888747 1 0.176944136619568 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 31 UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30614363 chr8:30614373 . 0.000 0 hm6A_associated_SNPs_30995 0 0 1 1 30614363 30614385 mRNA hsa-miR-214 UBXN8 miRanda miRanda
14034 chr8 30614373 30614373 1 + C T COAD 30614386 + 30614366 30614406 41 GAATTTCCGTCTCCTGCTGAACAGCCCACATGCAAGGAGGT GAATTTCTGTCTCCTGCTGAACAGCCCACATGCAAGGAGGT < 41bp 1 0.117147424120899 1 0.225939363241196 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30614386 chr8:30614373 . 0.000 0 hm6A_associated_SNPs_30996 0 0 1 1 30614363 30614385 mRNA hsa-miR-214 UBXN8 miRanda miRanda
14034 chr5 31551474 31551474 1 + T C COAD 31551459 + 31551439 31551479 41 CCTCACCATATCAGCACAGAACAAGAAATAGAGTGTCTTAT CCTCACCATATCAGCACAGAACAAGAAATAGAGTGCCTTAT < 41bp 1 0.720200620871542 1 0.011148989200592 experiment 0.559598758256917 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 C5orf22 ENSG00000082213 CDS Human protein_coding chr5:31551459 chr5:31551474 synonymous SNV . 0 hm6A_associated_SNPs_31004 0 0 1 1 31551470 31551494 mRNA hsa-miR-32 C5orf22 miRanda miRanda
14034 chr20 35929740 35929740 1 + G A COAD 35929741 + 35929721 35929761 41 GAGAACCTGCTACGGTACGGACTCTTCCTGGGAGCCATCTT GAGAACCTGCTACGGTACGAACTCTTCCTGGGAGCCATCTT < 41bp 1 0.46180494218883 1 0.807229518890381 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 MANBAL ENSG00000101363 CDS Human protein_coding chr20:35929741 chr20:35929740 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_31046 0 0 1 1 35929720 35929740 mRNA hsa-miR-126 MANBAL miRanda miRanda
14034 chr5 56545288 56545288 1 + G A COAD 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCATCT < 41bp 1 0.408161265923147 1 0.330224990844727 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545288 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31125 0 0 1 2 56545282 56545304 mRNA hsa-miR-223 GPBP1 miRanda miRanda
14034 chr5 56545288 56545288 1 + G A COAD 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCATCT < 41bp 1 0.408161265923147 1 0.330224990844727 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545288 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31125 0 0 1 2 56545270 56545288 mRNA hsa-miR-485-5p GPBP1 miRanda miRanda
14034 chr16 2257262 2257262 1 + G A COAD 2257248 + 2257228 2257268 41 TCCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTG TCCACATCTGGGACTTGAAAACAGACCACAACGAACAGCTG < 41bp 1 0.710235327962994 1 0.830208659172058 experiment 0.579529344074012 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 35 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2257248 chr16:2257262 synonymous SNV . 0 hm6A_associated_SNPs_31141 0 0 1 1 2257257 2257280 mRNA hsa-miR-24 MLST8 miRanda miRanda
14034 chr7 142983678 142983678 1 + G A COAD 142983691 + 142983671 142983711 41 TCCAGGAGAGCCAAACTGGAACAGAGGCGAATGGCCTCAGA TCCAGGAAAGCCAAACTGGAACAGAGGCGAATGGCCTCAGA < 41bp 1 0.745065976574746 1 0.994356393814087 experiment 0.509868046850508 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 TMEM139 ENSG00000178826 CDS Human protein_coding chr7:142983691 chr7:142983678 nonsynonymous SNV 0.007 0 hm6A_associated_SNPs_31171 0 0 0 1 142983665 142983691 mRNA hsa-miR-145 TMEM139 miRanda miRanda
14034 chr1 169790857 169790857 1 + A G COAD 169790850 + 169790830 169790870 41 ACTACAGATTATTTCAGAAAACACTCAAATTGTGTCGTTTT ACTACAGATTATTTCAGAAAACACTCAGATTGTGTCGTTTT < 41bp 1 0.444294969210644 1 0.501458585262299 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 C1orf112 ENSG00000000460 CDS Human protein_coding chr1:169790850 chr1:169790857 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_31176 0 0 1 1 169790856 169790879 mRNA hsa-miR-182 C1orf112 miRanda miRanda
14034 chr21 33036139 33036139 1 + A C COAD 33036144 + 33036124 33036164 41 GTGTGGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGG GTGTGGGGAAGCATTCAAGGACTGACTGAAGGCCTGCATGG < 41bp 1 0.74842605537153 1 0.884246468544006 experiment 0.503147889256941 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33036144 chr21:33036139 nonsynonymous SNV 0.006 1 hm6A_associated_SNPs_31265 0 0 1 1 33036120 33036140 mRNA hsa-miR-155 SOD1 miRanda miRanda
14034 chr21 33036139 33036139 1 + A C COAD 33036148 + 33036128 33036168 41 GGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTC GGGGAAGCATTCAAGGACTGACTGAAGGCCTGCATGGATTC < 41bp 1 0.601458231185506 1 0.437959015369415 experiment 0.797083537628988 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33036148 chr21:33036139 nonsynonymous SNV 0.006 1 hm6A_associated_SNPs_31266 0 0 1 1 33036120 33036140 mRNA hsa-miR-155 SOD1 miRanda miRanda
14034 chr6 4032030 4032030 1 + T A COAD 4032048 + 4032028 4032068 41 TCTCCAGCAAAAAGAACTAAACTTGATGATTTAGCTTTGCT TCACCAGCAAAAAGAACTAAACTTGATGATTTAGCTTTGCT < 41bp 1 0.744134802085868 1 0.973655104637146 experiment 0.511730395828263 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4032048 chr6:4032030 synonymous SNV . 0 hm6A_associated_SNPs_31289 0 0 1 1 4032021 4032041 mRNA hsa-miR-129-5p PRPF4B miRanda miRanda
14034 chr1 93300390 93300390 1 + G A COAD 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACAAACTGCCAAAATATGGTGTGAA < 41bp 1 0.194476553814375 1 0.288664221763611 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300390 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_31295 0 0 1 3 93300378 93300400 mRNA hsa-miR-96 RPL5 miRanda miRanda
14034 chr1 93300390 93300390 1 + G A COAD 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACAAACTGCCAAAATATGGTGTGAA < 41bp 1 0.194476553814375 1 0.288664221763611 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300390 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_31295 0 0 1 3 93300377 93300400 mRNA hsa-miR-182 RPL5 miRanda miRanda
14034 chr1 93300390 93300390 1 + G A COAD 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCGTATGCACACAAACTGCCAAAATATGGTGTGAA < 41bp 1 0.194476553814375 1 0.288664221763611 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300390 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_31295 0 0 1 3 93300379 93300400 mRNA hsa-miR-1271 RPL5 miRanda miRanda
14034 chr11 35641610 35641610 1 + G A COAD 35641620 + 35641600 35641640 41 ACCCGCAAAGGTGTCTAAAAACTTCAGCTTTTCACCCACCT ACCCGCAAAGATGTCTAAAAACTTCAGCTTTTCACCCACCT < 41bp 1 0.630768697414314 1 0.972606539726257 experiment 0.738462605171372 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 FJX1 ENSG00000179431 UTR3 Human protein_coding chr11:35641620 chr11:35641610 . . 0 hm6A_associated_SNPs_31304 0 0 1 2 35641609 35641631 mRNA hsa-miR-320a FJX1 miRanda miRanda
14034 chr11 35641610 35641610 1 + G A COAD 35641620 + 35641600 35641640 41 ACCCGCAAAGGTGTCTAAAAACTTCAGCTTTTCACCCACCT ACCCGCAAAGATGTCTAAAAACTTCAGCTTTTCACCCACCT < 41bp 1 0.630768697414314 1 0.972606539726257 experiment 0.738462605171372 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 FJX1 ENSG00000179431 UTR3 Human protein_coding chr11:35641620 chr11:35641610 . . 0 hm6A_associated_SNPs_31304 0 0 1 2 35641609 35641631 mRNA hsa-miR-320b FJX1 miRanda miRanda
14034 chr9 6460755 6460755 1 + G T COAD 6460745 + 6460725 6460765 41 CAGAAATTACCACATTGAAGACAATCTCAAGGACCAAAAAA CAGAAATTACCACATTGAAGACAATCTCAATGACCAAAAAA < 41bp 1 0.768856743073939 1 0.986413657665253 experiment 0.462286513852122 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6460745 chr9:6460755 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_31351 0 0 1 2 6460741 6460762 mRNA hsa-miR-133a UHRF2 miRanda miRanda
14034 chr9 6460755 6460755 1 + G T COAD 6460745 + 6460725 6460765 41 CAGAAATTACCACATTGAAGACAATCTCAAGGACCAAAAAA CAGAAATTACCACATTGAAGACAATCTCAATGACCAAAAAA < 41bp 1 0.768856743073939 1 0.986413657665253 experiment 0.462286513852122 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6460745 chr9:6460755 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_31351 0 0 1 2 6460741 6460762 mRNA hsa-miR-133b UHRF2 miRanda miRanda
14034 chr9 6460755 6460755 1 + G T COAD 6460757 + 6460737 6460777 41 CATTGAAGACAATCTCAAGGACCAAAAAAGAACTTCGTGTG CATTGAAGACAATCTCAATGACCAAAAAAGAACTTCGTGTG < 41bp 1 0.205450411737088 1 0.984018325805664 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6460757 chr9:6460755 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_31352 0 0 1 2 6460741 6460762 mRNA hsa-miR-133a UHRF2 miRanda miRanda
14034 chr9 6460755 6460755 1 + G T COAD 6460757 + 6460737 6460777 41 CATTGAAGACAATCTCAAGGACCAAAAAAGAACTTCGTGTG CATTGAAGACAATCTCAATGACCAAAAAAGAACTTCGTGTG < 41bp 1 0.205450411737088 1 0.984018325805664 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6460757 chr9:6460755 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_31352 0 0 1 2 6460741 6460762 mRNA hsa-miR-133b UHRF2 miRanda miRanda
14034 chr19 9453040 9453040 1 + G T COAD 9453060 + 9453040 9453080 41 GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT TAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT < 41bp 1 0.469446535855421 1 0.972261726856232 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 1 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453060 chr19:9453040 stopgain 0.822 0 hm6A_associated_SNPs_31373 0 0 1 1 9453036 9453057 mRNA hsa-miR-539 ZNF559 miRanda miRanda
14034 chr2 202131427 202131427 1 + A C COAD 202131422 + 202131402 202131442 41 CTGCTCTTCCGAATTAATAGACTGGATTTGCTGATTACCTA CTGCTCTTCCGAATTAATAGACTGGCTTTGCTGATTACCTA < 41bp 1 0.393302480323991 1 0.987823247909546 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202131422 chr2:202131427 nonsynonymous SNV 0.057 4 hm6A_associated_SNPs_31375 0 0 1 1 202131419 202131440 mRNA hsa-miR-194 CASP8 miRanda miRanda
14034 chr10 27459081 27459081 1 + C A COAD 27459097 + 27459077 27459117 41 GTTTCTTGGGAAGCAGTAGAACTGGATGTAAATAATATAAA GTTTATTGGGAAGCAGTAGAACTGGATGTAAATAATATAAA < 41bp 1 0.799828516120253 1 0.951729953289032 experiment 0.400342967759495 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459097 chr10:27459081 nonsynonymous SNV 0.707 2 hm6A_associated_SNPs_31415 0 0 1 1 27459074 27459103 mRNA hsa-miR-145 MASTL miRanda miRanda
14034 chr16 24231371 24231371 1 + C A COAD 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTCATCATGAAATTGGA < 41bp 1 0.432987515989879 1 0.930332660675049 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231371 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31452 0 0 1 3 24231371 24231397 mRNA hsa-miR-15b PRKCB miRanda miRanda
14034 chr16 24231371 24231371 1 + C A COAD 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTCATCATGAAATTGGA < 41bp 1 0.432987515989879 1 0.930332660675049 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231371 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31452 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231371 24231371 1 + C A COAD 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTCATCATGAAATTGGA < 41bp 1 0.432987515989879 1 0.930332660675049 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231371 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31452 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr16 24231371 24231371 1 + C A COAD 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAAATTGGACCAAAATGAATTTG Direct Loss 1 0.537605266151695 1 0.908925533294678 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231371 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31453 0 0 1 3 24231371 24231397 mRNA hsa-miR-15b PRKCB miRanda miRanda
14034 chr16 24231371 24231371 1 + C A COAD 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAAATTGGACCAAAATGAATTTG Direct Loss 1 0.537605266151695 1 0.908925533294678 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231371 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31453 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231371 24231371 1 + C A COAD 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAAATTGGACCAAAATGAATTTG Direct Loss 1 0.537605266151695 1 0.908925533294678 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231371 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31453 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr17 80422301 80422301 1 + A G COAD 80422302 + 80422282 80422322 41 CTTCCGCGTTCTGAACCTTAACAAGGTAAGGCATTCGGGGC CTTCCGCGTTCTGAACCTTGACAAGGTAAGGCATTCGGGGC < 41bp 1 0.563847329564386 1 0.811203420162201 experiment 0.872305340871228 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 20 NARF ENSG00000141562 CDS Human protein_coding chr17:80422302 chr17:80422301 nonsynonymous SNV 0.990 3 hm6A_associated_SNPs_31476 0 0 1 2 80422295 80422306 mRNA hsa-miR-23a NARF miRanda miRanda
14034 chr17 80422301 80422301 1 + A G COAD 80422302 + 80422282 80422322 41 CTTCCGCGTTCTGAACCTTAACAAGGTAAGGCATTCGGGGC CTTCCGCGTTCTGAACCTTGACAAGGTAAGGCATTCGGGGC < 41bp 1 0.563847329564386 1 0.811203420162201 experiment 0.872305340871228 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 20 NARF ENSG00000141562 CDS Human protein_coding chr17:80422302 chr17:80422301 nonsynonymous SNV 0.990 3 hm6A_associated_SNPs_31476 0 0 1 2 80422295 80422306 mRNA hsa-miR-23b NARF miRanda miRanda
14034 chr17 18167449 18167449 1 + G A COAD 18167435 + 18167415 18167455 41 CCGTGGGAGCAGCCCCTGGGACCGCTTCCTGGTCGGGGGCT CCGTGGGAGCAGCCCCTGGGACCGCTTCCTGGTCAGGGGCT < 41bp 1 0.726370648339853 1 0.949598431587219 experiment 0.547258703320295 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 MIEF2 ENSG00000177427 CDS Human protein_coding chr17:18167435 chr17:18167449 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_31516 0 0 1 1 18167447 18167467 mRNA hsa-miR-185 SMCR7 miRanda miRanda
14034 chr15 65849121 65849121 1 + G A COAD 65849108 + 65849088 65849128 41 ACTGACCCAGAGGCAGGTAAACATTACAGTACAGAAGAAAG ACTGACCCAGAGGCAGGTAAACATTACAGTACAAAAGAAAG < 41bp 1 0.48842582963371 1 0.675535321235657 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65849108 chr15:65849121 synonymous SNV . 0 hm6A_associated_SNPs_31538 0 0 1 1 65849102 65849123 mRNA hsa-miR-486-5p PTPLAD1 miRanda miRanda
14034 chr7 151791382 151791382 1 + C T COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGTTTTTTGTTTAT < 41bp 1 0.754773165035597 1 0.936890125274658 experiment 0.490453669928806 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791382 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31635 0 0 1 7 151791373 151791394 mRNA hsa-miR-30a GALNT11 miRanda miRanda
14034 chr7 151791382 151791382 1 + C T COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGTTTTTTGTTTAT < 41bp 1 0.754773165035597 1 0.936890125274658 experiment 0.490453669928806 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791382 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31635 0 0 1 7 151791369 151791394 mRNA hsa-miR-30c GALNT11 miRanda miRanda
14034 chr7 151791382 151791382 1 + C T COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGTTTTTTGTTTAT < 41bp 1 0.754773165035597 1 0.936890125274658 experiment 0.490453669928806 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791382 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31635 0 0 1 7 151791373 151791394 mRNA hsa-miR-30d GALNT11 miRanda miRanda
14034 chr7 151791382 151791382 1 + C T COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGTTTTTTGTTTAT < 41bp 1 0.754773165035597 1 0.936890125274658 experiment 0.490453669928806 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791382 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31635 0 0 1 7 151791377 151791398 mRNA hsa-miR-203 GALNT11 miRanda miRanda
14034 chr7 151791382 151791382 1 + C T COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGTTTTTTGTTTAT < 41bp 1 0.754773165035597 1 0.936890125274658 experiment 0.490453669928806 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791382 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31635 0 0 1 7 151791373 151791394 mRNA hsa-miR-30b GALNT11 miRanda miRanda
14034 chr7 151791382 151791382 1 + C T COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGTTTTTTGTTTAT < 41bp 1 0.754773165035597 1 0.936890125274658 experiment 0.490453669928806 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791382 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31635 0 0 1 7 151791373 151791394 mRNA hsa-miR-30e GALNT11 miRanda miRanda
14034 chr7 151791382 151791382 1 + C T COAD 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGTTTTTTGTTTAT < 41bp 1 0.754773165035597 1 0.936890125274658 experiment 0.490453669928806 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791382 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31635 0 0 1 7 151791381 151791402 mRNA hsa-miR-382 GALNT11 miRanda miRanda
14034 chr5 74893837 74893837 1 + T A COAD 74893844 + 74893824 74893864 41 TTGATATATTTTTTAAGTAAACATTGAACATTTTATCATTA TTGATATATTTTTAAAGTAAACATTGAACATTTTATCATTA < 41bp 1 0.712862126558754 1 0.59118664264679 experiment 0.574275746882492 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 POLK ENSG00000122008 CDS Human protein_coding chr5:74893844 chr5:74893837 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_31639 0 0 1 1 74893828 74893849 mRNA hsa-miR-590-3p POLK miRanda miRanda
14034 chr5 74893837 74893837 1 + T A COAD 74893851 + 74893831 74893871 41 ATTTTTTAAGTAAACATTGAACATTTTATCATTAATTTTTA ATTTTTAAAGTAAACATTGAACATTTTATCATTAATTTTTA < 41bp 1 0.73061987909493 1 0.534693598747253 experiment 0.53876024181014 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 POLK ENSG00000122008 CDS Human protein_coding chr5:74893851 chr5:74893837 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_31640 0 0 1 1 74893828 74893849 mRNA hsa-miR-590-3p POLK miRanda miRanda
14034 chr5 112203218 112203218 1 + G A COAD 112203234 + 112203214 112203254 41 AAAGGAAAGAAAAAGAAGTAACCTAGTATCAGCATCAAGTA AAAGAAAAGAAAAAGAAGTAACCTAGTATCAGCATCAAGTA < 41bp 1 0.536635328410276 1 0.444534182548523 experiment 0.926729343179449 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 SRP19 ENSG00000153037 CDS Human protein_coding chr5:112203234 chr5:112203218 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_31666 0 0 1 1 112203217 112203238 mRNA hsa-miR-154 SRP19 miRanda miRanda
14034 chr10 114925669 114925669 1 + C T COAD 114925687 + 114925667 114925707 41 CCCACAGCTCCCTGGCCGGGACCCAGCCCCAGCCGCTGTCG CCTACAGCTCCCTGGCCGGGACCCAGCCCCAGCCGCTGTCG < 41bp 1 0.612532323930251 1 0.959682822227478 experiment 0.774935352139498 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925687 chr10:114925669 nonsynonymous SNV 0.957 5 hm6A_associated_SNPs_31674 0 0 1 3 114925649 114925669 mRNA hsa-miR-1 TCF7L2 miRanda miRanda
14034 chr10 114925669 114925669 1 + C T COAD 114925687 + 114925667 114925707 41 CCCACAGCTCCCTGGCCGGGACCCAGCCCCAGCCGCTGTCG CCTACAGCTCCCTGGCCGGGACCCAGCCCCAGCCGCTGTCG < 41bp 1 0.612532323930251 1 0.959682822227478 experiment 0.774935352139498 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925687 chr10:114925669 nonsynonymous SNV 0.957 5 hm6A_associated_SNPs_31674 0 0 1 3 114925648 114925669 mRNA hsa-miR-206 TCF7L2 miRanda miRanda
14034 chr10 114925669 114925669 1 + C T COAD 114925687 + 114925667 114925707 41 CCCACAGCTCCCTGGCCGGGACCCAGCCCCAGCCGCTGTCG CCTACAGCTCCCTGGCCGGGACCCAGCCCCAGCCGCTGTCG < 41bp 1 0.612532323930251 1 0.959682822227478 experiment 0.774935352139498 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925687 chr10:114925669 nonsynonymous SNV 0.957 5 hm6A_associated_SNPs_31674 0 0 1 3 114925650 114925669 mRNA hsa-miR-613 TCF7L2 miRanda miRanda
14034 chr9 139306642 139306642 1 + A G COAD 139306632 + 139306612 139306652 41 GCATCTCAGAATAAGTTTGGACAGTTTTGTACAGTAGGAAG GCATCTCAGAATAAGTTTGGACAGTTTTGTGCAGTAGGAAG < 41bp 1 0.784508159830078 1 0.913003921508789 experiment 0.430983680339844 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306632 chr9:139306642 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_31700 0 0 1 3 139306631 139306650 mRNA hsa-miR-370 PMPCA miRanda miRanda
14034 chr9 139306642 139306642 1 + A G COAD 139306632 + 139306612 139306652 41 GCATCTCAGAATAAGTTTGGACAGTTTTGTACAGTAGGAAG GCATCTCAGAATAAGTTTGGACAGTTTTGTGCAGTAGGAAG < 41bp 1 0.784508159830078 1 0.913003921508789 experiment 0.430983680339844 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306632 chr9:139306642 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_31700 0 0 1 3 139306627 139306651 mRNA hsa-miR-384 PMPCA miRanda miRanda
14034 chr9 139306642 139306642 1 + A G COAD 139306632 + 139306612 139306652 41 GCATCTCAGAATAAGTTTGGACAGTTTTGTACAGTAGGAAG GCATCTCAGAATAAGTTTGGACAGTTTTGTGCAGTAGGAAG < 41bp 1 0.784508159830078 1 0.913003921508789 experiment 0.430983680339844 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306632 chr9:139306642 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_31700 0 0 1 3 139306626 139306647 mRNA hsa-miR-486-5p PMPCA miRanda miRanda
14034 chr11 607285 607285 1 + C T COAD 607300 + 607280 607320 41 TGGGGCGGTTCAGGCTCGGAACTTGTCAAATGGGAGTGTGC TGGGGTGGTTCAGGCTCGGAACTTGTCAAATGGGAGTGTGC < 41bp 1 0.742035096893691 1 0.947731852531433 experiment 0.515929806212617 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 6 PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607300 chr11:607285 nonsynonymous SNV 0.001 1 hm6A_associated_SNPs_31704 0 0 1 1 607278 607299 mRNA hsa-miR-615-3p PHRF1 miRanda miRanda
14034 chr13 103508432 103508432 1 + A G COAD 103508450 + 103508430 103508470 41 CAAGAAAGAATGAATCAAAAACAAGCATTACAGGTATTTAG CAGGAAAGAATGAATCAAAAACAAGCATTACAGGTATTTAG < 41bp 1 0.687895367172504 1 0.731855690479279 experiment 0.624209265654991 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103508450 chr13:103508432 synonymous SNV . 0 hm6A_associated_SNPs_31745 0 0 1 1 103508416 103508436 mRNA hsa-miR-431 ERCC5 miRanda miRanda
14034 chr14 95080920 95080920 1 + G A COAD 95080915 + 95080895 95080935 41 AGACCGAGGGACACACGTGGACCTCGGATTAGCCTCCGCCA AGACCGAGGGACACACGTGGACCTCAGATTAGCCTCCGCCA < 41bp 1 0.171597089303712 1 0.990021407604218 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080915 chr14:95080920 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_31797 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr19 5685017 5685017 1 + C T COAD 5685029 + 5685009 5685049 41 AGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGGTGTT AGGGAGCGTGAGTGCTGCTGACAGGGGCCAACGCTGGTGTT < 41bp 1 0.398939683568075 1 0.195979952812195 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 9 HSD11B1L ENSG00000167733 CDS Human protein_coding chr19:5685029 chr19:5685017 stopgain 0.094 0 hm6A_associated_SNPs_31830 0 0 1 1 5685015 5685035 mRNA hsa-miR-339-5p HSD11B1L miRanda miRanda
14034 chr2 70045782 70045782 1 + A C COAD 70045790 + 70045770 70045810 41 AACAGAGTATTAAATCTGAAACATCTGGTAGCTTTGAAGAT AACAGAGTATTACATCTGAAACATCTGGTAGCTTTGAAGAT < 41bp 1 0.719719446672025 1 0.0220077335834503 experiment 0.560561106655949 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70045790 chr2:70045782 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31842 0 0 1 2 70045774 70045798 mRNA hsa-miR-199a-5p ANXA4 miRanda miRanda
14034 chr2 70045782 70045782 1 + A C COAD 70045790 + 70045770 70045810 41 AACAGAGTATTAAATCTGAAACATCTGGTAGCTTTGAAGAT AACAGAGTATTACATCTGAAACATCTGGTAGCTTTGAAGAT < 41bp 1 0.719719446672025 1 0.0220077335834503 experiment 0.560561106655949 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70045790 chr2:70045782 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31842 0 0 1 2 70045774 70045798 mRNA hsa-miR-199b-5p ANXA4 miRanda miRanda
14034 chr13 31850891 31850891 1 + A C COAD 31850881 + 31850861 31850901 41 ATATTTTTGTTGCAGTAAAAACATGCAAGAAATTTCATGGT ATATTTTTGTTGCAGTAAAAACATGCAAGACATTTCATGGT < 41bp 1 0.519482148626812 1 0.74708092212677 experiment 0.961035702746377 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31850881 chr13:31850891 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_31844 0 0 0 1 31850866 31850892 mRNA hsa-miR-544 B3GALTL miRanda miRanda
14034 chr14 65390800 65390800 1 + A G COAD 65390797 + 65390777 65390817 41 GGATTTTATGCTGATCACAAACAAATCCTTGAAAGAAGAAG GGATTTTATGCTGATCACAAACAGATCCTTGAAAGAAGAAG < 41bp 1 0.666744711954649 1 0.815235137939453 experiment 0.666510576090702 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 24 CHURC1;CHURC1-FNTB ENSG00000125954;ENSG00000257365;ENSG00000258289 CDS Human other chr14:65390797 chr14:65390800 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_31853 0 0 1 1 65390785 65390805 mRNA hsa-miR-876-5p LOC100289314 miRanda miRanda
14034 chr4 155801 155801 1 + G T COAD 155795 + 155775 155815 41 CAGTCCTCACACTTGAATAAACATAAGAAAATTCACACTGT CAGTCCTCACACTTGAATAAACATAATAAAATTCACACTGT < 41bp 1 0.0313579242818029 1 0.995880007743835 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 27 ZNF718 ENSG00000250312 ncRNA_exonic Human protein_coding chr4:155795 chr4:155801 . 0.034 2 hm6A_associated_SNPs_31894 0 0 0 2 155796 155818 mRNA hsa-miR-139-5p ZNF718 miRanda miRanda
14034 chr4 155801 155801 1 + G T COAD 155795 + 155775 155815 41 CAGTCCTCACACTTGAATAAACATAAGAAAATTCACACTGT CAGTCCTCACACTTGAATAAACATAATAAAATTCACACTGT < 41bp 1 0.0313579242818029 1 0.995880007743835 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 27 ZNF718 ENSG00000250312 ncRNA_exonic Human protein_coding chr4:155795 chr4:155801 . 0.034 2 hm6A_associated_SNPs_31894 0 0 0 2 155792 155815 mRNA hsa-miR-125a-3p ZNF718 miRanda miRanda
14034 chr4 170641203 170641203 1 + G T COAD 170641216 + 170641196 170641236 41 TTGAATAGCACAACTCTTTAACCTGAGGGAGTCATCTACTT TTGAATATCACAACTCTTTAACCTGAGGGAGTCATCTACTT < 41bp 1 0.759858529035164 1 0.793775320053101 experiment 0.480282941929673 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170641216 chr4:170641203 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31907 0 0 1 1 170641188 170641208 mRNA hsa-miR-218 CLCN3 miRanda miRanda
14034 chr18 54424012 54424012 1 + G A COAD 54424007 + 54423987 54424027 41 AAAAGCATCTGGCAGTTCAGACAAAGGGGGCTCTTTTTTAA AAAAGCATCTGGCAGTTCAGACAAAAGGGGCTCTTTTTTAA < 41bp 1 0.775988800164417 1 0.988190770149231 experiment 0.448022399671167 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 WDR7 ENSG00000091157 CDS Human protein_coding chr18:54424007 chr18:54424012 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_31910 0 0 0 1 54424012 54424033 mRNA hsa-miR-145 WDR7 miRanda miRanda
14034 chr22 50637557 50637557 1 + A G COAD 50637553 + 50637533 50637573 41 TTTTAATTTCAGAGAGAAAAACTGAAGTAAATGTCAAAAAA TTTTAATTTCAGAGAGAAAAACTGGAGTAAATGTCAAAAAA < 41bp 1 0.640479570896966 1 0.858709394931793 experiment 0.719040858206069 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 TRABD ENSG00000170638 CDS Human protein_coding chr22:50637553 chr22:50637557 stoploss 0.999 0 hm6A_associated_SNPs_31969 0 0 1 1 50637538 50637559 mRNA hsa-miR-223 TRABD miRanda miRanda
14034 chr22 50637557 50637557 1 + A G COAD 50637573 + 50637553 50637593 41 ACTGAAGTAAATGTCAAAAAACACCAGCCTTAAATCCAAAG ACTGGAGTAAATGTCAAAAAACACCAGCCTTAAATCCAAAG < 41bp 1 0.488185616703405 1 0.792406678199768 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 5 TRABD ENSG00000170638 CDS Human protein_coding chr22:50637573 chr22:50637557 stoploss 0.999 0 hm6A_associated_SNPs_31970 0 0 1 1 50637538 50637559 mRNA hsa-miR-223 TRABD miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGACCACAACTGCCTCCCCCAGG < 41bp 1 0.408180704648904 1 0.925590693950653 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31976 0 0 1 4 39951407 39951437 mRNA hsa-miR-34a MACF1 miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGACCACAACTGCCTCCCCCAGG < 41bp 1 0.408180704648904 1 0.925590693950653 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31976 0 0 1 4 39951414 39951437 mRNA hsa-miR-34c-5p MACF1 miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGACCACAACTGCCTCCCCCAGG < 41bp 1 0.408180704648904 1 0.925590693950653 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31976 0 0 1 4 39951412 39951437 mRNA hsa-miR-449a MACF1 miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGACCACAACTGCCTCCCCCAGG < 41bp 1 0.408180704648904 1 0.925590693950653 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31976 0 0 1 4 39951412 39951437 mRNA hsa-miR-449b MACF1 miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA CCACAACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.647523661732653 1 0.970806241035461 experiment 0.704952676534694 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31977 0 0 1 4 39951407 39951437 mRNA hsa-miR-34a MACF1 miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA CCACAACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.647523661732653 1 0.970806241035461 experiment 0.704952676534694 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31977 0 0 1 4 39951414 39951437 mRNA hsa-miR-34c-5p MACF1 miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA CCACAACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.647523661732653 1 0.970806241035461 experiment 0.704952676534694 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31977 0 0 1 4 39951412 39951437 mRNA hsa-miR-449a MACF1 miRanda miRanda
14034 chr1 39951430 39951430 1 + C A COAD 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA CCACAACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.647523661732653 1 0.970806241035461 experiment 0.704952676534694 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 5 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951430 synonymous SNV . 0 hm6A_associated_SNPs_31977 0 0 1 4 39951412 39951437 mRNA hsa-miR-449b MACF1 miRanda miRanda
14034 chr1 76256972 76256972 1 + G A COAD 76256979 + 76256959 76256999 41 TTTTATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTG TTTTATTGTAGGAAAAATTGACACAAGATTCTCTTTTTGTG < 41bp 1 0.652532319378172 1 0.381566405296326 experiment 0.694935361243656 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 14 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256979 chr1:76256972 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_31980 0 0 1 1 76256970 76256985 mRNA hsa-miR-599 RABGGTB miRanda miRanda
14034 chr22 38087219 38087219 1 + G A COAD 38087238 + 38087218 38087258 41 CGCAAAAAGGTCAAGAGGAAACATCCCCGACGGGCCCAGGA CACAAAAAGGTCAAGAGGAAACATCCCCGACGGGCCCAGGA < 41bp 1 0.765572145530212 1 0.864240884780884 experiment 0.468855708939575 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 NOL12 ENSG00000100101 CDS Human protein_coding chr22:38087238 chr22:38087219 nonsynonymous SNV 0.809 3 hm6A_associated_SNPs_32013 0 0 1 1 38087205 38087226 mRNA hsa-miR-129-5p NOL12 miRanda miRanda
14034 chr4 185593505 185593505 1 + G A COAD 185593517 + 185593497 185593537 41 TGGACATCGAATTCAAAGAAACTGGAGAGGCTGGGGTCAGC TGGACATCAAATTCAAAGAAACTGGAGAGGCTGGGGTCAGC < 41bp 1 0.0737254694755973 1 0.989569962024689 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185593517 chr4:185593505 synonymous SNV . 0 hm6A_associated_SNPs_32040 0 0 0 1 185593502 185593523 mRNA hsa-miR-145 CCDC111 miRanda miRanda
14034 chr12 107237706 107237706 1 + G A COAD 107237700 + 107237680 107237720 41 ATGTTCCCGAGCCCATCGAAACATCCGAAAATTTCTCAAAG ATGTTCCCGAGCCCATCGAAACATCCAAAAATTTCTCAAAG < 41bp 1 0.411858815188375 1 0.00343960523605347 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 RIC8B ENSG00000111785 CDS Human protein_coding chr12:107237700 chr12:107237706 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_32060 0 0 0 1 107237698 107237717 mRNA hsa-miR-539 RIC8B miRanda miRanda
14034 chr7 135304552 135304552 1 + C T COAD 135304561 + 135304541 135304581 41 GTGGATTCCAACGAGTGAGGACTCACTTGTATGGCTCTCTG GTGGATTCCAATGAGTGAGGACTCACTTGTATGGCTCTCTG < 41bp 1 0.20374828224517 1 0.946272373199463 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135304561 chr7:135304552 stopgain 0.796 1 hm6A_associated_SNPs_32061 0 0 1 2 135304552 135304573 mRNA hsa-miR-381 NUP205 miRanda miRanda
14034 chr7 135304552 135304552 1 + C T COAD 135304561 + 135304541 135304581 41 GTGGATTCCAACGAGTGAGGACTCACTTGTATGGCTCTCTG GTGGATTCCAATGAGTGAGGACTCACTTGTATGGCTCTCTG < 41bp 1 0.20374828224517 1 0.946272373199463 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135304561 chr7:135304552 stopgain 0.796 1 hm6A_associated_SNPs_32061 0 0 1 2 135304552 135304573 mRNA hsa-miR-300 NUP205 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTTAGTA < 41bp 1 0.652405290117659 1 0.518817722797394 experiment 0.695189419764683 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32065 0 0 1 4 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTTAGTA < 41bp 1 0.652405290117659 1 0.518817722797394 experiment 0.695189419764683 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32065 0 0 1 4 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTTAGTA < 41bp 1 0.652405290117659 1 0.518817722797394 experiment 0.695189419764683 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32065 0 0 1 4 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTTAGTA < 41bp 1 0.652405290117659 1 0.518817722797394 experiment 0.695189419764683 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32065 0 0 1 4 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTTAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.602500317972661 1 0.555047512054443 experiment 0.794999364054678 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32066 0 0 1 4 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTTAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.602500317972661 1 0.555047512054443 experiment 0.794999364054678 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32066 0 0 1 4 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTTAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.602500317972661 1 0.555047512054443 experiment 0.794999364054678 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32066 0 0 1 4 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575152 48575152 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTTAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.602500317972661 1 0.555047512054443 experiment 0.794999364054678 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575152 stopgain 1.000 1 hm6A_associated_SNPs_32066 0 0 1 4 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chr17 73045324 73045324 1 + G T COAD 73045340 + 73045320 73045360 41 GACAGGAGCCTATCTGATTGACAGGGACCCCACCTACTTTG GACATGAGCCTATCTGATTGACAGGGACCCCACCTACTTTG < 41bp 1 0.41477574082259 1 0.195519119501114 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 5 KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73045340 chr17:73045324 stopgain 0.941 1 hm6A_associated_SNPs_32084 0 0 1 1 73045322 73045346 mRNA hsa-miR-339-5p KCTD2 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575130 + 48575110 48575150 41 CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTG CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTA < 41bp 1 0.6763466867395 1 0.722124814987183 experiment 0.647306626520999 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575130 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32133 1 0 1 4 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575130 + 48575110 48575150 41 CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTG CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTA < 41bp 1 0.6763466867395 1 0.722124814987183 experiment 0.647306626520999 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575130 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32133 1 0 1 4 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575130 + 48575110 48575150 41 CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTG CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTA < 41bp 1 0.6763466867395 1 0.722124814987183 experiment 0.647306626520999 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575130 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32133 1 0 1 4 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575130 + 48575110 48575150 41 CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTG CCTGATCTTCACAAAAATGAACTAAAACATGTTAAATATTA < 41bp 1 0.6763466867395 1 0.722124814987183 experiment 0.647306626520999 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575130 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32133 1 0 1 4 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTATCAGTA < 41bp 1 0.65298714586383 1 0.554865181446075 experiment 0.69402570827234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32134 1 0 1 4 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTATCAGTA < 41bp 1 0.65298714586383 1 0.554865181446075 experiment 0.69402570827234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32134 1 0 1 4 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTATCAGTA < 41bp 1 0.65298714586383 1 0.554865181446075 experiment 0.69402570827234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32134 1 0 1 4 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTATCAGTA < 41bp 1 0.65298714586383 1 0.554865181446075 experiment 0.69402570827234 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32134 1 0 1 4 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTATCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.615627112512065 1 0.611185252666473 experiment 0.768745774975869 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32135 1 0 1 4 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTATCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.615627112512065 1 0.611185252666473 experiment 0.768745774975869 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32135 1 0 1 4 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTATCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.615627112512065 1 0.611185252666473 experiment 0.768745774975869 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32135 1 0 1 4 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575150 48575150 1 + G A COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTATCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.615627112512065 1 0.611185252666473 experiment 0.768745774975869 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575150 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_32135 1 0 1 4 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chrX 41204490 41204490 1 + T C COAD 41204505 + 41204485 41204525 41 CAGATTCGTAGAATAGTCGAACAAGATACTATGCCTCCAAA CAGATCCGTAGAATAGTCGAACAAGATACTATGCCTCCAAA < 41bp 1 0.623722805053784 1 0.2622230052948 experiment 0.752554389892433 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41204505 chrX:41204490 synonymous SNV . 0 hm6A_associated_SNPs_32175 0 0 1 1 41204486 41204509 mRNA hsa-miR-375 DDX3X miRanda miRanda
14034 chr17 26495622 26495622 1 + G A COAD 26495604 + 26495584 26495624 41 TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATGTA TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATATA < 41bp 1 0.651304208619806 1 0.0936374068260193 experiment 0.697391582760388 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 39 NLK ENSG00000087095 CDS Human protein_coding chr17:26495604 chr17:26495622 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_32243 0 0 1 2 26495602 26495624 mRNA hsa-miR-324-5p NLK miRanda miRanda
14034 chr17 26495622 26495622 1 + G A COAD 26495604 + 26495584 26495624 41 TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATGTA TCATTACAGCAATGCTATTGACATCTGGTCTGTGGGATATA < 41bp 1 0.651304208619806 1 0.0936374068260193 experiment 0.697391582760388 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 39 NLK ENSG00000087095 CDS Human protein_coding chr17:26495604 chr17:26495622 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_32243 0 0 1 2 26495615 26495636 mRNA hsa-miR-544 NLK miRanda miRanda
14034 chr12 49919823 49919823 1 + C T COAD 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTATGGGTTGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.776753834264351 1 0.678339838981628 experiment 0.446492331471299 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919823 nonsynonymous SNV 0.990 2 hm6A_associated_SNPs_32253 0 0 1 2 49919804 49919825 mRNA hsa-miR-551a SPATS2 miRanda miRanda
14034 chr12 49919823 49919823 1 + C T COAD 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTATGGGTTGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.776753834264351 1 0.678339838981628 experiment 0.446492331471299 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919823 nonsynonymous SNV 0.990 2 hm6A_associated_SNPs_32253 0 0 1 2 49919804 49919825 mRNA hsa-miR-551b SPATS2 miRanda miRanda
14034 chr4 146044636 146044636 1 + A G COAD 146044652 + 146044632 146044672 41 TCATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACAT TCATGCTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACAT < 41bp 1 0.672366531292307 1 0.934329509735107 experiment 0.655266937415386 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 5 ABCE1 ENSG00000164163 CDS Human protein_coding chr4:146044652 chr4:146044636 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32307 0 0 0 1 146044633 146044650 mRNA hsa-miR-129-5p ABCE1 miRanda miRanda
14034 chr19 44679970 44679970 1 + C T COAD 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAT < 41bp 1 0.469832306359909 1 0.667600035667419 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679970 synonymous SNV . 0 hm6A_associated_SNPs_32346 0 0 1 1 44679962 44679984 mRNA hsa-miR-450a ZNF226 miRanda miRanda
14034 chr19 44679970 44679970 1 + C T COAD 44679969 + 44679949 44679989 41 GACTGAGTCACAGAGATTGAACAGAGATCAGCAAATTTCCA GACTGAGTCACAGAGATTGAATAGAGATCAGCAAATTTCCA Direct Loss 1 0.4407921648253 1 0.460190951824188 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679969 chr19:44679970 synonymous SNV . 0 hm6A_associated_SNPs_32347 0 0 1 1 44679962 44679984 mRNA hsa-miR-450a ZNF226 miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292035 33292053 mRNA hsa-let-7a S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292029 33292053 mRNA hsa-let-7b S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292035 33292053 mRNA hsa-let-7c S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292035 33292053 mRNA hsa-let-7d S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292030 33292053 mRNA hsa-let-7e S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292035 33292053 mRNA hsa-let-7f S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292029 33292053 mRNA hsa-miR-98 S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292031 33292052 mRNA hsa-miR-196a S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292035 33292053 mRNA hsa-let-7g S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292032 33292053 mRNA hsa-let-7i S100PBP miRanda miRanda
14034 chr1 33292050 33292050 1 + C A COAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTCTTCAAACTACATCAGCTAAGTACATC < 41bp 1 0.748497994827587 1 0.98734849691391 experiment 0.503004010344826 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292050 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_32377 0 0 0 11 33292031 33292052 mRNA hsa-miR-196b S100PBP miRanda miRanda
14034 chr19 989857 989857 1 + G A COAD 989865 + 989845 989885 41 CTTCATCTCAGGGGGCAAGGACTGCCTGGTGCTGGTTTGGA CTTCATCTCAGGAGGCAAGGACTGCCTGGTGCTGGTTTGGA < 41bp 1 0.426181054389052 1 0.964673101902008 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 13 WDR18 ENSG00000065268 CDS Human protein_coding chr19:989865 chr19:989857 synonymous SNV . 0 hm6A_associated_SNPs_32396 0 0 1 2 989837 989858 mRNA hsa-miR-125b WDR18 miRanda miRanda
14034 chr19 989857 989857 1 + G A COAD 989865 + 989845 989885 41 CTTCATCTCAGGGGGCAAGGACTGCCTGGTGCTGGTTTGGA CTTCATCTCAGGAGGCAAGGACTGCCTGGTGCTGGTTTGGA < 41bp 1 0.426181054389052 1 0.964673101902008 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 13 WDR18 ENSG00000065268 CDS Human protein_coding chr19:989865 chr19:989857 synonymous SNV . 0 hm6A_associated_SNPs_32396 0 0 1 2 989835 989858 mRNA hsa-miR-125a-5p WDR18 miRanda miRanda
14034 chr1 231488721 231488721 1 + A C COAD 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAACACTCAGTCTCTTCTAGTTCTC Direct Loss 1 0.662646981131859 1 0.40083983540535 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488721 nonsynonymous SNV 0.003 0 hm6A_associated_SNPs_32443 0 0 1 2 231488721 231488743 mRNA hsa-miR-146a C1orf124 miRanda miRanda
14034 chr1 231488721 231488721 1 + A C COAD 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAACACTCAGTCTCTTCTAGTTCTC Direct Loss 1 0.662646981131859 1 0.40083983540535 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488721 nonsynonymous SNV 0.003 0 hm6A_associated_SNPs_32443 0 0 1 2 231488721 231488743 mRNA hsa-miR-146b-5p C1orf124 miRanda miRanda
14034 chr14 54997669 54997669 1 + T C COAD 54997683 + 54997663 54997703 41 AAGAGATACTAAAATTGAAGACTTTGGTACAGTACCCAGAT AAGAGACACTAAAATTGAAGACTTTGGTACAGTACCCAGAT < 41bp 1 0.446773347542446 1 0.987694025039673 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:54997683 chr14:54997669 synonymous SNV . 0 hm6A_associated_SNPs_32446 0 0 1 2 54997660 54997679 mRNA hsa-miR-590-3p CGRRF1 miRanda miRanda
14034 chr14 54997669 54997669 1 + T C COAD 54997683 + 54997663 54997703 41 AAGAGATACTAAAATTGAAGACTTTGGTACAGTACCCAGAT AAGAGACACTAAAATTGAAGACTTTGGTACAGTACCCAGAT < 41bp 1 0.446773347542446 1 0.987694025039673 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:54997683 chr14:54997669 synonymous SNV . 0 hm6A_associated_SNPs_32446 0 0 1 2 54997644 54997671 mRNA hsa-miR-216b CGRRF1 miRanda miRanda
14034 chr16 30012763 30012763 1 + C A COAD 30012769 + 30012749 30012789 41 CTACCCCCCATTCCCTTCTGACTACCTGGCCCTGCAGCTGC CTACCCCCCATTCCATTCTGACTACCTGGCCCTGCAGCTGC < 41bp 1 0.636794433341631 1 0.372428894042969 experiment 0.726411133316739 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 15 INO80E ENSG00000169592 CDS Human protein_coding chr16:30012769 chr16:30012763 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_32458 0 0 1 2 30012755 30012776 mRNA hsa-miR-196a INO80E miRanda miRanda
14034 chr16 30012763 30012763 1 + C A COAD 30012769 + 30012749 30012789 41 CTACCCCCCATTCCCTTCTGACTACCTGGCCCTGCAGCTGC CTACCCCCCATTCCATTCTGACTACCTGGCCCTGCAGCTGC < 41bp 1 0.636794433341631 1 0.372428894042969 experiment 0.726411133316739 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 15 INO80E ENSG00000169592 CDS Human protein_coding chr16:30012769 chr16:30012763 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_32458 0 0 1 2 30012755 30012776 mRNA hsa-miR-196b INO80E miRanda miRanda
14034 chr15 99827494 99827494 1 + C T COAD 99827479 + 99827459 99827499 41 TAGATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAG TAGATACCTGCACTCAAATAACATAGTTGTGGTTCTGGAAG < 41bp 1 0.496169611548574 1 0.0208940207958221 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 36 LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99827479 chr15:99827494 nonsynonymous SNV 0.935 4 hm6A_associated_SNPs_32526 0 0 0 2 99827477 99827499 mRNA hsa-miR-135a LRRC28 miRanda miRanda
14034 chr15 99827494 99827494 1 + C T COAD 99827479 + 99827459 99827499 41 TAGATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAG TAGATACCTGCACTCAAATAACATAGTTGTGGTTCTGGAAG < 41bp 1 0.496169611548574 1 0.0208940207958221 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 36 LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99827479 chr15:99827494 nonsynonymous SNV 0.935 4 hm6A_associated_SNPs_32526 0 0 0 2 99827477 99827499 mRNA hsa-miR-135b LRRC28 miRanda miRanda
14034 chr8 25364369 25364369 1 + T C COAD 25364366 + 25364346 25364386 41 GTGGCATCAGATAGTCCCAAACCTGCTCTGACCCTGCAGCA GTGGCATCAGATAGTCCCAAACCCGCTCTGACCCTGCAGCA < 41bp 1 0.403130787304593 1 0.879297256469727 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364366 chr8:25364369 synonymous SNV . 0 hm6A_associated_SNPs_32550 0 0 1 1 25364366 25364389 mRNA hsa-miR-370 CDCA2 miRanda miRanda
14034 chr18 32888472 32888472 1 + C T COAD 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTTAGT < 41bp 1 0.127703207088728 1 0.233667641878128 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888472 . . 0 hm6A_associated_SNPs_32557 0 0 1 5 32888450 32888472 mRNA hsa-miR-181a ZNF271 miRanda miRanda
14034 chr18 32888472 32888472 1 + C T COAD 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTTAGT < 41bp 1 0.127703207088728 1 0.233667641878128 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888472 . . 0 hm6A_associated_SNPs_32557 0 0 1 5 32888450 32888472 mRNA hsa-miR-181b ZNF271 miRanda miRanda
14034 chr18 32888472 32888472 1 + C T COAD 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTTAGT < 41bp 1 0.127703207088728 1 0.233667641878128 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888472 . . 0 hm6A_associated_SNPs_32557 0 0 1 5 32888451 32888472 mRNA hsa-miR-181c ZNF271 miRanda miRanda
14034 chr18 32888472 32888472 1 + C T COAD 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTTAGT < 41bp 1 0.127703207088728 1 0.233667641878128 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888472 . . 0 hm6A_associated_SNPs_32557 0 0 1 5 32888450 32888476 mRNA hsa-miR-217 ZNF271 miRanda miRanda
14034 chr18 32888472 32888472 1 + C T COAD 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTTAGT < 41bp 1 0.127703207088728 1 0.233667641878128 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888472 . . 0 hm6A_associated_SNPs_32557 0 0 1 5 32888450 32888472 mRNA hsa-miR-181d ZNF271 miRanda miRanda
14034 chr13 113882344 113882344 1 + C T COAD 113882353 + 113882333 113882373 41 TGCTGGCAGGACCACTGCAGACAAATGGTAAGCTTGTTCAC TGCTGGCAGGATCACTGCAGACAAATGGTAAGCTTGTTCAC < 41bp 1 0.639458733698808 1 0.135506957769394 experiment 0.721082532602385 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 CUL4A ENSG00000139842 CDS Human protein_coding chr13:113882353 chr13:113882344 synonymous SNV . 0 hm6A_associated_SNPs_32588 0 0 1 1 113882344 113882359 mRNA hsa-miR-433 CUL4A miRanda miRanda
14034 chr19 992028 992028 1 + G A COAD 992009 + 991989 992029 41 CGTCAGCATGCTGAGCTCAGACTTCAGGCCCAGCCTGCCGC CGTCAGCATGCTGAGCTCAGACTTCAGGCCCAGCCTGCCAC < 41bp 1 0.647760768406978 1 0.684359669685364 experiment 0.704478463186045 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 WDR18 ENSG00000065268 CDS Human protein_coding chr19:992009 chr19:992028 synonymous SNV . 0 hm6A_associated_SNPs_32591 0 0 1 1 992025 992045 mRNA hsa-miR-653 WDR18 miRanda miRanda
14034 chrX 41205800 41205800 1 + A G COAD 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTCAAATGTGAAACATGTTGTCAATTTTGACTT < 41bp 1 0.633997019702743 1 0.981780469417572 experiment 0.732005960594514 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205800 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32611 0 0 1 4 41205797 41205817 mRNA hsa-miR-31 DDX3X miRanda miRanda
14034 chrX 41205800 41205800 1 + A G COAD 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTCAAATGTGAAACATGTTGTCAATTTTGACTT < 41bp 1 0.633997019702743 1 0.981780469417572 experiment 0.732005960594514 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205800 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32611 0 0 1 4 41205797 41205819 mRNA hsa-miR-96 DDX3X miRanda miRanda
14034 chrX 41205800 41205800 1 + A G COAD 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTCAAATGTGAAACATGTTGTCAATTTTGACTT < 41bp 1 0.633997019702743 1 0.981780469417572 experiment 0.732005960594514 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205800 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32611 0 0 1 4 41205797 41205819 mRNA hsa-miR-182 DDX3X miRanda miRanda
14034 chrX 41205800 41205800 1 + A G COAD 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACATTTCAAATGTGAAACATGTTGTCAATTTTGACTT < 41bp 1 0.633997019702743 1 0.981780469417572 experiment 0.732005960594514 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205800 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32611 0 0 1 4 41205798 41205819 mRNA hsa-miR-1271 DDX3X miRanda miRanda
14034 chr10 99991401 99991401 1 + G A COAD 99991390 + 99991370 99991410 41 ACATGTCATTGAAATTTATGACTTTCCCCAAGAATTTCATA ACATGTCATTGAAATTTATGACTTTCCCCAAAAATTTCATA < 41bp 1 0.271943735655161 1 0.68279367685318 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99991390 chr10:99991401 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_32625 0 0 1 1 99991380 99991401 mRNA hsa-miR-491-5p C10orf28 miRanda miRanda
14034 chr12 121659753 121659753 1 + T C COAD 121659767 + 121659747 121659787 41 TGATCCTCACCATGAACCAGACACAGGGCCTGTGCCCCGAG TGATCCCCACCATGAACCAGACACAGGGCCTGTGCCCCGAG < 41bp 1 0.401997219546688 1 0.850369930267334 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121659767 chr12:121659753 nonsynonymous SNV 0.768 0 hm6A_associated_SNPs_32644 0 0 1 1 121659739 121659761 mRNA hsa-miR-125a-3p P2RX4 miRanda miRanda
14034 chr18 54424391 54424391 1 + G A COAD 54424395 + 54424375 54424415 41 TATAATCAGCCTGCTTGTAAACTGTCACATGGGAAAACAGA TATAATCAGCCTGCTTATAAACTGTCACATGGGAAAACAGA < 41bp 1 0.580101879273965 1 0.990155220031738 experiment 0.839796241452071 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 WDR7 ENSG00000091157 CDS Human protein_coding chr18:54424395 chr18:54424391 nonsynonymous SNV 0.076 0 hm6A_associated_SNPs_32654 0 0 0 1 54424383 54424403 mRNA hsa-miR-542-3p WDR7 miRanda miRanda
14034 chr13 98043681 98043681 1 + A T COAD 98043692 + 98043672 98043712 41 CCTCAATAGAATTGCCACAAACTGCATGCTAAATAAAGATG CCTCAATAGTATTGCCACAAACTGCATGCTAAATAAAGATG < 41bp 1 0.560478244389579 1 0.696802020072937 experiment 0.879043511220842 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 MBNL2 ENSG00000139793 CDS Human protein_coding chr13:98043692 chr13:98043681 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_32701 0 0 1 2 98043667 98043690 mRNA hsa-miR-182 MBNL2 miRanda miRanda
14034 chr13 98043681 98043681 1 + A T COAD 98043692 + 98043672 98043712 41 CCTCAATAGAATTGCCACAAACTGCATGCTAAATAAAGATG CCTCAATAGTATTGCCACAAACTGCATGCTAAATAAAGATG < 41bp 1 0.560478244389579 1 0.696802020072937 experiment 0.879043511220842 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 MBNL2 ENSG00000139793 CDS Human protein_coding chr13:98043692 chr13:98043681 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_32701 0 0 1 2 98043681 98043702 mRNA hsa-miR-497 MBNL2 miRanda miRanda
14034 chr14 60590961 60590961 1 + G A COAD 60590954 + 60590934 60590974 41 AGGGGTTAGAATTGCAGGAAACATCCTGTCATACTGCAGAA AGGGGTTAGAATTGCAGGAAACATCCTATCATACTGCAGAA < 41bp 1 0.77199497745978 1 0.85563337802887 experiment 0.45601004508044 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 28 PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60590954 chr14:60590961 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_32716 0 0 1 2 60590949 60590972 mRNA hsa-miR-448 C14orf135 miRanda miRanda
14034 chr14 60590961 60590961 1 + G A COAD 60590954 + 60590934 60590974 41 AGGGGTTAGAATTGCAGGAAACATCCTGTCATACTGCAGAA AGGGGTTAGAATTGCAGGAAACATCCTATCATACTGCAGAA < 41bp 1 0.77199497745978 1 0.85563337802887 experiment 0.45601004508044 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 28 PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60590954 chr14:60590961 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_32716 0 0 1 2 60590952 60590975 mRNA hsa-miR-544 C14orf135 miRanda miRanda
14034 chr5 126154686 126154686 1 + A G COAD 126154696 + 126154676 126154716 41 CTCTCGTCGCATGCTGACAGACAAAGAGAGAGAGATGGCGG CTCTCGTCGCGTGCTGACAGACAAAGAGAGAGAGATGGCGG < 41bp 1 0.790816449576452 1 0.886363625526428 experiment 0.418367100847095 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126154696 chr5:126154686 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_32741 0 0 1 1 126154668 126154691 mRNA hsa-miR-503 LMNB1 miRanda miRanda
14034 chr15 89837095 89837095 1 + T A COAD 89837112 + 89837092 89837132 41 TTATTTATGTGTTACAAAAAACTCTCTGACATTCTTAATGA TTAATTATGTGTTACAAAAAACTCTCTGACATTCTTAATGA < 41bp 1 0.387698576578543 1 0.00339236855506897 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 FANCI ENSG00000140525 CDS Human protein_coding chr15:89837112 chr15:89837095 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_32755 0 0 1 1 89837084 89837107 mRNA hsa-miR-30b FANCI miRanda miRanda
14034 chr17 6348464 6348464 1 + G A COAD 6348450 + 6348430 6348470 41 GATGGCTTCTCGGTGGCAGAACATGGGGACCTCCGTGCGCC GATGGCTTCTCGGTGGCAGAACATGGGGACCTCCATGCGCC < 41bp 1 0.447980261782167 1 0.989173889160156 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 35 PIMREG ENSG00000129195 CDS Human protein_coding chr17:6348450 chr17:6348464 nonsynonymous SNV 0.008 0 hm6A_associated_SNPs_32758 0 0 0 1 6348462 6348483 mRNA hsa-miR-185 FAM64A miRanda miRanda
14034 chr14 105920565 105920565 1 + G A COAD 105920572 + 105920552 105920592 41 TCTACGACCCACAGCAGAAGACCCTGCTGGCAGATAAAGGA TCTACGACCCACAACAGAAGACCCTGCTGGCAGATAAAGGA < 41bp 1 0.193726080833001 1 0.264180928468704 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 MTA1 ENSG00000182979 CDS Human protein_coding chr14:105920572 chr14:105920565 synonymous SNV . 0 hm6A_associated_SNPs_32763 0 0 1 1 105920560 105920581 mRNA hsa-miR-214 MTA1 miRanda miRanda
14034 chr14 23240753 23240753 1 + G A COAD 23240767 + 23240747 23240787 41 TGGCACGACACACTTGGCTGACTTATGTTCTGTGCGCATTC TGGCACAACACACTTGGCTGACTTATGTTCTGTGCGCATTC < 41bp 1 0.615155683792429 1 0.817084729671478 experiment 0.769688632415142 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240767 chr14:23240753 nonsynonymous SNV 0.324 3 hm6A_associated_SNPs_32766 0 0 1 1 23240739 23240762 mRNA hsa-miR-382 OXA1L miRanda miRanda
14034 chr10 89268209 89268209 1 + T C COAD 89268215 + 89268195 89268235 41 ATCACGTGGAAGCCTTCAAAACTGGACCAGAAATGCAGAAC ATCACGTGGAAGCCCTCAAAACTGGACCAGAAATGCAGAAC < 41bp 1 0.258105742467381 1 0.961718082427979 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89268215 chr10:89268209 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_32804 0 0 1 1 89268200 89268221 mRNA hsa-miR-145 MINPP1 miRanda miRanda
14034 chr22 35806803 35806803 1 + G A COAD 35806813 + 35806793 35806833 41 CCATCAAGAAGTTTGGCCTGACTACCAGCAGGGGCCGTGAC CCATCAAGAAATTTGGCCTGACTACCAGCAGGGGCCGTGAC < 41bp 1 0.326262126852895 1 0.110539257526398 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35806813 chr22:35806803 synonymous SNV . 0 hm6A_associated_SNPs_32825 0 0 1 1 35806803 35806825 mRNA hsa-miR-370 MCM5 miRanda miRanda
14034 chr6 31541462 31541462 1 + G A COAD 31541472 + 31541452 31541492 41 TGGAGCCTTCGCTCTGTAGAACTTGGAAAAATCCAGAAAGA TGGAGCCTTCACTCTGTAGAACTTGGAAAAATCCAGAAAGA < 41bp 1 0.638481436552753 1 0.733597278594971 experiment 0.723037126894495 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 LTA ENSG00000226979 CDS Human protein_coding chr6:31541472 chr6:31541462 nonsynonymous SNV 0.919 4 hm6A_associated_SNPs_32831 0 0 0 1 31541451 31541471 mRNA hsa-miR-139-5p LTA miRanda miRanda
14034 chr2 160087103 160087103 1 + G A COAD 160087088 + 160087068 160087108 41 AGCGGTACAGCTGAGCACAGACCCCGCAACACGCCGTTCAT AGCGGTACAGCTGAGCACAGACCCCGCAACACGCCATTCAT < 41bp 1 0.652712668489165 1 0.982803761959076 experiment 0.69457466302167 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 TANC1 ENSG00000115183 CDS Human protein_coding chr2:160087088 chr2:160087103 synonymous SNV . 0 hm6A_associated_SNPs_32836 0 0 1 1 160087096 160087118 mRNA hsa-miR-455-5p TANC1 miRanda miRanda
14034 chr19 39973540 39973540 1 + A G COAD 39973528 + 39973508 39973548 41 CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGACGAAAATG CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGGCGAAAATG < 41bp 1 0.694994156892775 1 0.0197789669036865 experiment 0.61001168621445 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39973528 chr19:39973540 nonsynonymous SNV 0.992 2 hm6A_associated_SNPs_32844 0 0 1 2 39973539 39973556 mRNA hsa-miR-96 TIMM50 miRanda miRanda
14034 chr19 39973540 39973540 1 + A G COAD 39973528 + 39973508 39973548 41 CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGACGAAAATG CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGGCGAAAATG < 41bp 1 0.694994156892775 1 0.0197789669036865 experiment 0.61001168621445 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39973528 chr19:39973540 nonsynonymous SNV 0.992 2 hm6A_associated_SNPs_32844 0 0 1 2 39973535 39973556 mRNA hsa-miR-1271 TIMM50 miRanda miRanda
14034 chr3 158369971 158369971 1 + A G COAD 158369981 + 158369961 158370001 41 TGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCT TGTGTTGCCAGTTCAGATGAACAGCTTGGTGAGATGTTTCT < 41bp 1 0.653683052204069 1 0.669541358947754 experiment 0.692633895591861 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158369981 chr3:158369971 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_32871 1 0 1 1 158369948 158369972 mRNA hsa-miR-182 GFM1 miRanda miRanda
14034 chr10 76936263 76936263 1 + A T COAD 76936276 + 76936256 76936296 41 GCTTTTTATATAACAACAAGACTCTTTTTGTACTACCATAC GCTTTTTTTATAACAACAAGACTCTTTTTGTACTACCATAC < 41bp 1 0.749394098509829 1 0.947627305984497 experiment 0.501211802980342 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 8 SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76936276 chr10:76936263 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_32886 0 0 1 3 76936242 76936266 mRNA hsa-miR-340 SAMD8 miRanda miRanda
14034 chr10 76936263 76936263 1 + A T COAD 76936276 + 76936256 76936296 41 GCTTTTTATATAACAACAAGACTCTTTTTGTACTACCATAC GCTTTTTTTATAACAACAAGACTCTTTTTGTACTACCATAC < 41bp 1 0.749394098509829 1 0.947627305984497 experiment 0.501211802980342 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 8 SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76936276 chr10:76936263 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_32886 0 0 1 3 76936258 76936278 mRNA hsa-miR-431 SAMD8 miRanda miRanda
14034 chr10 76936263 76936263 1 + A T COAD 76936276 + 76936256 76936296 41 GCTTTTTATATAACAACAAGACTCTTTTTGTACTACCATAC GCTTTTTTTATAACAACAAGACTCTTTTTGTACTACCATAC < 41bp 1 0.749394098509829 1 0.947627305984497 experiment 0.501211802980342 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 8 SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76936276 chr10:76936263 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_32886 0 0 1 3 76936247 76936267 mRNA hsa-miR-410 SAMD8 miRanda miRanda
14034 chr3 101311488 101311488 1 + C T COAD 101311497 + 101311477 101311517 41 ACCAACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGC ACCAACATCAGTTGGACCAAACTCCTTCAATAAAGGAAAGC < 41bp 1 0.653137650221932 1 0.311553508043289 experiment 0.693724699556137 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 PCNP ENSG00000081154 CDS Human protein_coding chr3:101311497 chr3:101311488 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_32906 0 0 1 2 101311476 101311497 mRNA hsa-miR-133a PCNP miRanda miRanda
14034 chr3 101311488 101311488 1 + C T COAD 101311497 + 101311477 101311517 41 ACCAACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGC ACCAACATCAGTTGGACCAAACTCCTTCAATAAAGGAAAGC < 41bp 1 0.653137650221932 1 0.311553508043289 experiment 0.693724699556137 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 PCNP ENSG00000081154 CDS Human protein_coding chr3:101311497 chr3:101311488 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_32906 0 0 1 2 101311476 101311497 mRNA hsa-miR-133b PCNP miRanda miRanda
14034 chrX 70641183 70641183 1 + T C COAD 70641166 + 70641146 70641186 41 TGTTCCTCTACAGGGCCAAAACACTCATTGACTCAGATCTC TGTTCCTCTACAGGGCCAAAACACTCATTGACTCAGACCTC < 41bp 1 0.278738062925941 1 0.0113344490528107 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 TAF1 ENSG00000147133 CDS Human protein_coding chrX:70641166 chrX:70641183 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_32911 0 0 1 1 70641179 70641201 mRNA hsa-miR-338-3p DYT3 miRanda miRanda
14034 chr14 90870762 90870762 1 + G A COAD 90870772 + 90870752 90870792 41 ACTACGTCACGTCATGACAAACTTAGGAGAAAAACTAACAG ACTACGTCACATCATGACAAACTTAGGAGAAAAACTAACAG < 41bp 1 0.531009830169112 1 0.868438422679901 experiment 0.937980339661776 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 CALM1 ENSG00000198668 CDS Human protein_coding chr14:90870772 chr14:90870762 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_32955 0 0 1 1 90870754 90870776 mRNA hsa-miR-382 CALM1 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806338 170806359 mRNA hsa-let-7a UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806335 170806359 mRNA hsa-let-7b UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806337 170806359 mRNA hsa-let-7c UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806337 170806359 mRNA hsa-let-7d UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806335 170806359 mRNA hsa-let-7f UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806335 170806359 mRNA hsa-miR-98 UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806333 170806359 mRNA hsa-let-7g UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806333 170806359 mRNA hsa-let-7i UBR3 miRanda miRanda
14034 chr2 170806359 170806359 1 + C A COAD 170806339 + 170806319 170806359 41 CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCC CACCACAAACTCTCAGGAAAACAAAACTCCTACTATCCTCA < 41bp 1 0.732224701387426 1 0.964152693748474 experiment 0.535550597225147 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806339 chr2:170806359 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_32966 0 0 1 9 170806359 170806382 mRNA hsa-miR-590-3p UBR3 miRanda miRanda
14034 chr7 104748029 104748029 1 + C A COAD 104748038 + 104748018 104748058 41 CCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAGCC CCTGGAAACGCATGCACATGACAGGGCTGAGCCCAACAGCC < 41bp 1 0.773314009987906 1 0.994224786758423 experiment 0.453371980024189 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748038 chr7:104748029 nonsynonymous SNV 0.906 3 hm6A_associated_SNPs_32974 0 0 1 2 104748029 104748051 mRNA hsa-miR-24 MLL5 miRanda miRanda
14034 chr7 104748029 104748029 1 + C A COAD 104748038 + 104748018 104748058 41 CCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAGCC CCTGGAAACGCATGCACATGACAGGGCTGAGCCCAACAGCC < 41bp 1 0.773314009987906 1 0.994224786758423 experiment 0.453371980024189 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748038 chr7:104748029 nonsynonymous SNV 0.906 3 hm6A_associated_SNPs_32974 0 0 1 2 104748020 104748044 mRNA hsa-miR-339-5p MLL5 miRanda miRanda
14034 chr10 1053033 1053033 1 + C T COAD 1053032 + 1053012 1053052 41 GTGAATGAGGTGCTGAATAGACTGCACCTGGCTATCCCAAC GTGAATGAGGTGCTGAATAGATTGCACCTGGCTATCCCAAC Direct Loss 1 0.428283304149986 1 0.860516786575317 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1053032 chr10:1053033 synonymous SNV . 0 hm6A_associated_SNPs_32975 0 0 1 1 1053016 1053042 mRNA hsa-miR-148a GTPBP4 miRanda miRanda
14034 chr6 42987057 42987057 1 + C T COAD 42987040 + 42987020 42987060 41 TTAAAGGCCCTAGTCTGAAGACTCTGTGCAAACTGGCCGTG TTAAAGGCCCTAGTCTGAAGACTCTGTGCAAACTGGCTGTG < 41bp 1 0.421343207434263 1 0.198014318943024 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42987040 chr6:42987057 synonymous SNV . 0 hm6A_associated_SNPs_32979 0 0 1 1 42987053 42987075 mRNA hsa-miR-154 KLHDC3 miRanda miRanda
14034 chr15 65847250 65847250 1 + C T COAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGATAA < 41bp 1 0.620180753464083 1 0.0436804890632629 experiment 0.759638493071834 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 39 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847250 synonymous SNV . 0 hm6A_associated_SNPs_33001 0 0 1 4 65847228 65847250 mRNA hsa-miR-204 PTPLAD1 miRanda miRanda
14034 chr15 65847250 65847250 1 + C T COAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGATAA < 41bp 1 0.620180753464083 1 0.0436804890632629 experiment 0.759638493071834 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 39 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847250 synonymous SNV . 0 hm6A_associated_SNPs_33001 0 0 1 4 65847227 65847250 mRNA hsa-miR-211 PTPLAD1 miRanda miRanda
14034 chr15 65847250 65847250 1 + C T COAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGATAA < 41bp 1 0.620180753464083 1 0.0436804890632629 experiment 0.759638493071834 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 39 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847250 synonymous SNV . 0 hm6A_associated_SNPs_33001 0 0 1 4 65847242 65847262 mRNA hsa-miR-376a PTPLAD1 miRanda miRanda
14034 chr15 65847250 65847250 1 + C T COAD 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGATAA < 41bp 1 0.620180753464083 1 0.0436804890632629 experiment 0.759638493071834 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 39 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847250 synonymous SNV . 0 hm6A_associated_SNPs_33001 0 0 1 4 65847241 65847262 mRNA hsa-miR-376b PTPLAD1 miRanda miRanda
14034 chr8 124138796 124138796 1 + A G COAD 124138793 + 124138773 124138813 41 CTGTGTTCTCAGAAGTGCTGACAAGAGAGGAGTGGCTGAAA CTGTGTTCTCAGAAGTGCTGACAGGAGAGGAGTGGCTGAAA < 41bp 1 0.449465914821547 1 0.00283890962600708 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124138793 chr8:124138796 nonsynonymous SNV 0.938 4 hm6A_associated_SNPs_33025 0 0 1 1 124138789 124138812 mRNA hsa-miR-197 WDR67 miRanda miRanda
14034 chr20 21142671 21142671 1 + C A COAD 21142660 + 21142640 21142680 41 ATCTCCCCAGCCCACAAAGAACTTTTCAATTCCTGACCCAC ATCTCCCCAGCCCACAAAGAACTTTTCAATTACTGACCCAC < 41bp 1 0.474147335145668 1 0.938428282737732 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142660 chr20:21142671 . 0.993 1 hm6A_associated_SNPs_33072 0 0 1 1 21142662 21142683 mRNA hsa-miR-299-3p PLK1S1 miRanda miRanda
14034 chr20 21142671 21142671 1 + C A COAD 21142675 + 21142655 21142695 41 AAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGA AAAGAACTTTTCAATTACTGACCCACATTCACACCGACAGA < 41bp 1 0.379910464830754 1 0.599469363689423 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142675 chr20:21142671 . 0.993 1 hm6A_associated_SNPs_33073 0 0 1 1 21142662 21142683 mRNA hsa-miR-299-3p PLK1S1 miRanda miRanda
14034 chr22 35811869 35811869 1 + G A COAD 35811861 + 35811841 35811881 41 GCAGCAGCGCAGCTGGACTGACAGCCTCGGTGATGAGGGAC GCAGCAGCGCAGCTGGACTGACAGCCTCAGTGATGAGGGAC < 41bp 1 0.492878304223013 1 0.441526979207993 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 29 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35811861 chr22:35811869 synonymous SNV . 0 hm6A_associated_SNPs_33104 0 0 1 1 35811848 35811869 mRNA hsa-miR-485-5p MCM5 miRanda miRanda
14034 chr11 67201897 67201897 1 + C T COAD 67201906 + 67201886 67201926 41 CACACGGCAGACGCCGGTGGACAGTCCTGATGACACAGCCC CACACGGCAGATGCCGGTGGACAGTCCTGATGACACAGCCC < 41bp 1 0.616922342222186 1 0.951890707015991 experiment 0.766155315555628 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 12 RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201906 chr11:67201897 nonsynonymous SNV 0.941 3 hm6A_associated_SNPs_33188 0 0 1 1 67201876 67201898 mRNA hsa-miR-346 RPS6KB2 miRanda miRanda
14034 chr19 9453589 9453589 1 + A T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACTCTGGTGAACGGCCC < 41bp 1 0.337667547820685 1 0.973815083503723 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453589 nonsynonymous SNV 0.871 0 hm6A_associated_SNPs_33196 0 0 1 6 9453578 9453597 mRNA hsa-miR-27a ZNF559 miRanda miRanda
14034 chr19 9453589 9453589 1 + A T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACTCTGGTGAACGGCCC < 41bp 1 0.337667547820685 1 0.973815083503723 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453589 nonsynonymous SNV 0.871 0 hm6A_associated_SNPs_33196 0 0 1 6 9453573 9453594 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453589 9453589 1 + A T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACTCTGGTGAACGGCCC < 41bp 1 0.337667547820685 1 0.973815083503723 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453589 nonsynonymous SNV 0.871 0 hm6A_associated_SNPs_33196 0 0 1 6 9453571 9453594 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453589 9453589 1 + A T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACTCTGGTGAACGGCCC < 41bp 1 0.337667547820685 1 0.973815083503723 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453589 nonsynonymous SNV 0.871 0 hm6A_associated_SNPs_33196 0 0 1 6 9453578 9453597 mRNA hsa-miR-27b ZNF559 miRanda miRanda
14034 chr19 9453589 9453589 1 + A T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACTCTGGTGAACGGCCC < 41bp 1 0.337667547820685 1 0.973815083503723 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453589 nonsynonymous SNV 0.871 0 hm6A_associated_SNPs_33196 0 0 1 6 9453572 9453593 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453589 9453589 1 + A T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACTCTGGTGAACGGCCC < 41bp 1 0.337667547820685 1 0.973815083503723 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453589 nonsynonymous SNV 0.871 0 hm6A_associated_SNPs_33196 0 0 1 6 9453585 9453613 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr19 17384941 17384941 1 + G A COAD 17384928 + 17384908 17384948 41 CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTC CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCACGAGCTC < 41bp 1 0.171714553098518 1 0.857003331184387 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17384928 chr19:17384941 nonsynonymous SNV 0.522 3 hm6A_associated_SNPs_33200 0 0 1 1 17384937 17384960 mRNA hsa-miR-708 C19orf62 miRanda miRanda
14034 chr4 79780759 79780759 1 + C T COAD 79780763 + 79780743 79780783 41 ATGCTTGAACCAGATCCGGAACATAGACCTGATATATTTCA ATGCTTGAACCAGATCTGGAACATAGACCTGATATATTTCA < 41bp 1 0.556157138175925 1 0.0850526988506317 experiment 0.887685723648149 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 BMP2K ENSG00000138756 CDS Human protein_coding chr4:79780763 chr4:79780759 nonsynonymous SNV 0.457 2 hm6A_associated_SNPs_33238 0 0 1 1 79780756 79780777 mRNA hsa-miR-361-5p BMP2K miRanda miRanda
14034 chr14 95080937 95080937 1 + C T COAD 95080942 + 95080922 95080962 41 ATTAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA ATTAGCCTCCGCCAATGTGGACTTCGCTTTCAGCCTGTACA < 41bp 1 0.40078337236385 1 0.997339963912964 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 16 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080942 chr14:95080937 synonymous SNV . 0 hm6A_associated_SNPs_33252 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr7 98956013 98956013 1 + T C COAD 98956022 + 98956002 98956042 41 TGTGTCATTTGTCTCAGAGAACAGCGTCGTGGCTGCTGTGA TGTGTCATTTGCCTCAGAGAACAGCGTCGTGGCTGCTGTGA < 41bp 1 0.673666207704154 1 0.189915001392365 experiment 0.652667584591692 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 12 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98956022 chr7:98956013 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_33303 0 0 1 1 98956010 98956026 mRNA hsa-miR-335 ARPC1A miRanda miRanda
14034 chr5 72798364 72798364 1 + G T COAD 72798349 + 72798329 72798369 41 AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATGACAAA AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATTACAAA < 41bp 1 0.556738053069715 1 0.37155494093895 experiment 0.88652389386057 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798349 chr5:72798364 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_33311 0 0 1 3 72798352 72798372 mRNA hsa-miR-129-5p BTF3 miRanda miRanda
14034 chr5 72798364 72798364 1 + G T COAD 72798349 + 72798329 72798369 41 AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATGACAAA AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATTACAAA < 41bp 1 0.556738053069715 1 0.37155494093895 experiment 0.88652389386057 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798349 chr5:72798364 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_33311 0 0 1 3 72798363 72798384 mRNA hsa-miR-146a BTF3 miRanda miRanda
14034 chr5 72798364 72798364 1 + G T COAD 72798349 + 72798329 72798369 41 AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATGACAAA AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATTACAAA < 41bp 1 0.556738053069715 1 0.37155494093895 experiment 0.88652389386057 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798349 chr5:72798364 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_33311 0 0 1 3 72798363 72798384 mRNA hsa-miR-146b-5p BTF3 miRanda miRanda
14034 chr5 72798364 72798364 1 + G T COAD 72798372 + 72798352 72798392 41 GCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA GCCACAGCAGATTACAAAAAACTTCAGTTCTCCTTAAAGAA < 41bp 1 0.462019490462104 1 0.421826541423798 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798372 chr5:72798364 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_33312 0 0 1 3 72798352 72798372 mRNA hsa-miR-129-5p BTF3 miRanda miRanda
14034 chr5 72798364 72798364 1 + G T COAD 72798372 + 72798352 72798392 41 GCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA GCCACAGCAGATTACAAAAAACTTCAGTTCTCCTTAAAGAA < 41bp 1 0.462019490462104 1 0.421826541423798 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798372 chr5:72798364 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_33312 0 0 1 3 72798363 72798384 mRNA hsa-miR-146a BTF3 miRanda miRanda
14034 chr5 72798364 72798364 1 + G T COAD 72798372 + 72798352 72798392 41 GCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA GCCACAGCAGATTACAAAAAACTTCAGTTCTCCTTAAAGAA < 41bp 1 0.462019490462104 1 0.421826541423798 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798372 chr5:72798364 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_33312 0 0 1 3 72798363 72798384 mRNA hsa-miR-146b-5p BTF3 miRanda miRanda
14034 chr22 36661253 36661253 1 + T C COAD 36661265 + 36661245 36661285 41 AATGATCATGAAAGACAAAAACTGGCACGATAAAGGCCAGC AATGATCACGAAAGACAAAAACTGGCACGATAAAGGCCAGC < 41bp 1 0.785390739810165 1 0.978444933891296 experiment 0.429218520379669 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 APOL1 ENSG00000100342 CDS Human protein_coding chr22:36661265 chr22:36661253 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_33347 0 0 1 1 36661235 36661256 mRNA hsa-miR-433 APOL1 miRanda miRanda
14034 chr9 125777871 125777871 1 + T C COAD 125777890 + 125777870 125777910 41 GTGCAGAAAAAATTCTTGAAACATGGGGAGAACTGTTGTCA GCGCAGAAAAAATTCTTGAAACATGGGGAGAACTGTTGTCA < 41bp 1 0.695303643170389 1 0.314661473035812 experiment 0.609392713659221 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 2 RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125777890 chr9:125777871 synonymous SNV . 0 hm6A_associated_SNPs_33386 0 0 1 1 125777855 125777878 mRNA hsa-miR-544 RABGAP1 miRanda miRanda
14034 chr18 23866153 23866153 1 + G A COAD 23866155 + 23866135 23866175 41 CAGGAGGAACAACAGCTGGAACTGGTTTGCTTCAGACTTCA CAGGAGGAACAACAGCTGAAACTGGTTTGCTTCAGACTTCA < 41bp 1 0.669571625264165 1 0.998411178588867 experiment 0.660856749471671 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 19 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23866155 chr18:23866153 nonsynonymous SNV 0.981 2 hm6A_associated_SNPs_33416 0 0 0 1 23866132 23866154 mRNA hsa-miR-199a-5p TAF4B miRanda miRanda
14034 chr18 23866153 23866153 1 + G A COAD 23866170 + 23866150 23866190 41 CTGGAACTGGTTTGCTTCAGACTTCAAAACCACTTGTGACA CTGAAACTGGTTTGCTTCAGACTTCAAAACCACTTGTGACA < 41bp 1 0.720260451760657 1 0.998292684555054 experiment 0.559479096478686 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23866170 chr18:23866153 nonsynonymous SNV 0.981 2 hm6A_associated_SNPs_33417 0 0 0 1 23866132 23866154 mRNA hsa-miR-199a-5p TAF4B miRanda miRanda
14034 chr4 186066193 186066193 1 + C A COAD 186066210 + 186066190 186066230 41 TTGCTTTGTCTACCCGCTGGACTTTGCTAGGACCAGGTTGG TTGATTTGTCTACCCGCTGGACTTTGCTAGGACCAGGTTGG < 41bp 1 0.783366520163618 1 0.985233664512634 experiment 0.433266959672765 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 4 SLC25A4 ENSG00000151729 CDS Human protein_coding chr4:186066210 chr4:186066193 stopgain 1.000 1 hm6A_associated_SNPs_33424 0 0 1 1 186066184 186066204 mRNA hsa-miR-379 SLC25A4 miRanda miRanda
14034 chr12 28605565 28605565 1 + A G COAD 28605569 + 28605549 28605589 41 ATTCAAAAAGCTATACAAGAACAAAGAAAAATAAGTCAGGT ATTCAAAAAGCTATACGAGAACAAAGAAAAATAAGTCAGGT < 41bp 1 0.420243876250459 1 0.892258882522583 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28605569 chr12:28605565 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_33445 0 0 1 1 28605552 28605573 mRNA hsa-miR-375 CCDC91 miRanda miRanda
14034 chr10 131964868 131964868 1 + A C COAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACAGGGACTCAACGCCTATTCCAGTTG < 41bp 1 0.565347048492603 1 0.911900639533997 experiment 0.869305903014794 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964868 nonsynonymous SNV 0.986 4 hm6A_associated_SNPs_33467 0 0 1 4 131964845 131964868 mRNA hsa-miR-133a GLRX3 miRanda miRanda
14034 chr10 131964868 131964868 1 + A C COAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACAGGGACTCAACGCCTATTCCAGTTG < 41bp 1 0.565347048492603 1 0.911900639533997 experiment 0.869305903014794 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964868 nonsynonymous SNV 0.986 4 hm6A_associated_SNPs_33467 0 0 1 4 131964852 131964875 mRNA hsa-miR-135a GLRX3 miRanda miRanda
14034 chr10 131964868 131964868 1 + A C COAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACAGGGACTCAACGCCTATTCCAGTTG < 41bp 1 0.565347048492603 1 0.911900639533997 experiment 0.869305903014794 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964868 nonsynonymous SNV 0.986 4 hm6A_associated_SNPs_33467 0 0 1 4 131964852 131964875 mRNA hsa-miR-135b GLRX3 miRanda miRanda
14034 chr10 131964868 131964868 1 + A C COAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACAGGGACTCAACGCCTATTCCAGTTG < 41bp 1 0.565347048492603 1 0.911900639533997 experiment 0.869305903014794 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964868 nonsynonymous SNV 0.986 4 hm6A_associated_SNPs_33467 0 0 1 4 131964845 131964868 mRNA hsa-miR-133b GLRX3 miRanda miRanda
14034 chr15 25213177 25213177 1 + G C COAD 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACACCAAGAGCTGGTTAAAGC < 41bp 1 0.309018606828526 1 0.0742992460727692 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213177 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_33482 0 0 0 2 25213167 25213191 mRNA hsa-miR-135a SNRPN miRanda miRanda
14034 chr15 25213177 25213177 1 + G C COAD 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACACCAAGAGCTGGTTAAAGC < 41bp 1 0.309018606828526 1 0.0742992460727692 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213177 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_33482 0 0 0 2 25213167 25213191 mRNA hsa-miR-135b SNRPN miRanda miRanda
14034 chr15 65849095 65849095 1 + C A COAD 65849108 + 65849088 65849128 41 ACTGACCCAGAGGCAGGTAAACATTACAGTACAGAAGAAAG ACTGACCAAGAGGCAGGTAAACATTACAGTACAGAAGAAAG < 41bp 1 0.524522475486735 1 0.749606251716614 experiment 0.950955049026529 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65849108 chr15:65849095 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_33493 0 0 1 2 65849079 65849100 mRNA hsa-miR-330-5p PTPLAD1 miRanda miRanda
14034 chr15 65849095 65849095 1 + C A COAD 65849108 + 65849088 65849128 41 ACTGACCCAGAGGCAGGTAAACATTACAGTACAGAAGAAAG ACTGACCAAGAGGCAGGTAAACATTACAGTACAGAAGAAAG < 41bp 1 0.524522475486735 1 0.749606251716614 experiment 0.950955049026529 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65849108 chr15:65849095 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_33493 0 0 1 2 65849081 65849100 mRNA hsa-miR-326 PTPLAD1 miRanda miRanda
14034 chr5 162945286 162945286 1 + C T COAD 162945268 + 162945248 162945288 41 TTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGA TTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAATGA < 41bp 1 0.724566424021664 1 0.945907771587372 experiment 0.550867151956672 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 39 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945268 chr5:162945286 stopgain 0.994 0 hm6A_associated_SNPs_33532 0 0 1 1 162945262 162945286 mRNA hsa-miR-182 MAT2B miRanda miRanda
14034 chr2 71653768 71653768 1 + G A COAD 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCATGGTGTT < 41bp 1 0.673879393897842 1 0.98930823802948 experiment 0.652241212204316 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653768 nonsynonymous SNV 0.328 0 hm6A_associated_SNPs_33563 0 0 1 1 71653759 71653779 mRNA hsa-miR-371-5p ZNF638 miRanda miRanda
14034 chr2 71653768 71653768 1 + G A COAD 71653784 + 71653764 71653804 41 CCTCGTGGTGTTGAGGGAGAACTATCTTTTGTGACATTGGA CCTCATGGTGTTGAGGGAGAACTATCTTTTGTGACATTGGA < 41bp 1 0.778953155777565 1 0.995047569274902 experiment 0.442093688444871 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653784 chr2:71653768 nonsynonymous SNV 0.328 0 hm6A_associated_SNPs_33564 0 0 1 1 71653759 71653779 mRNA hsa-miR-371-5p ZNF638 miRanda miRanda
14034 chr17 80422305 80422305 1 + A C COAD 80422302 + 80422282 80422322 41 CTTCCGCGTTCTGAACCTTAACAAGGTAAGGCATTCGGGGC CTTCCGCGTTCTGAACCTTAACACGGTAAGGCATTCGGGGC < 41bp 1 0.493931253012276 1 0.799647629261017 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 NARF ENSG00000141562 CDS Human protein_coding chr17:80422302 chr17:80422305 nonsynonymous SNV 0.986 2 hm6A_associated_SNPs_33591 0 0 1 3 80422295 80422306 mRNA hsa-miR-23a NARF miRanda miRanda
14034 chr17 80422305 80422305 1 + A C COAD 80422302 + 80422282 80422322 41 CTTCCGCGTTCTGAACCTTAACAAGGTAAGGCATTCGGGGC CTTCCGCGTTCTGAACCTTAACACGGTAAGGCATTCGGGGC < 41bp 1 0.493931253012276 1 0.799647629261017 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 NARF ENSG00000141562 CDS Human protein_coding chr17:80422302 chr17:80422305 nonsynonymous SNV 0.986 2 hm6A_associated_SNPs_33591 0 0 1 3 80422295 80422306 mRNA hsa-miR-23b NARF miRanda miRanda
14034 chr17 80422305 80422305 1 + A C COAD 80422302 + 80422282 80422322 41 CTTCCGCGTTCTGAACCTTAACAAGGTAAGGCATTCGGGGC CTTCCGCGTTCTGAACCTTAACACGGTAAGGCATTCGGGGC < 41bp 1 0.493931253012276 1 0.799647629261017 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 NARF ENSG00000141562 CDS Human protein_coding chr17:80422302 chr17:80422305 nonsynonymous SNV 0.986 2 hm6A_associated_SNPs_33591 0 0 1 3 80422302 80422306 mRNA hsa-miR-202 NARF miRanda miRanda
14034 chr3 148880655 148880655 1 + C T COAD 148880651 + 148880631 148880671 41 CTGACACCACACCATTGCGAACATCGGAGGATCTGGTAAGA CTGACACCACACCATTGCGAACATTGGAGGATCTGGTAAGA < 41bp 1 0.538269933535746 1 0.695873975753784 experiment 0.923460132928507 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 25 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148880651 chr3:148880655 nonsynonymous SNV 0.038 1 hm6A_associated_SNPs_33592 0 0 1 1 148880649 148880665 mRNA hsa-miR-361-5p HPS3 miRanda miRanda
14034 chr12 49919821 49919821 1 + G T COAD 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTATGGTTCGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.780959352401323 1 0.788716793060303 experiment 0.438081295197354 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 9 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919821 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_33597 0 0 1 2 49919804 49919825 mRNA hsa-miR-551a SPATS2 miRanda miRanda
14034 chr12 49919821 49919821 1 + G T COAD 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTATGGTTCGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.780959352401323 1 0.788716793060303 experiment 0.438081295197354 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 9 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919821 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_33597 0 0 1 2 49919804 49919825 mRNA hsa-miR-551b SPATS2 miRanda miRanda
14034 chr17 62532801 62532801 1 + C T COAD 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGTGAGATGAACAAAGGAGACGCCACCAGGA < 41bp 1 0.676241227733874 1 0.952224791049957 experiment 0.647517544532253 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532801 stopgain 0.840 1 hm6A_associated_SNPs_33611 0 0 1 2 62532796 62532819 mRNA hsa-miR-204 CCDC45 miRanda miRanda
14034 chr17 62532801 62532801 1 + C T COAD 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGTGAGATGAACAAAGGAGACGCCACCAGGA < 41bp 1 0.676241227733874 1 0.952224791049957 experiment 0.647517544532253 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532801 stopgain 0.840 1 hm6A_associated_SNPs_33611 0 0 1 2 62532798 62532819 mRNA hsa-miR-211 CCDC45 miRanda miRanda
14034 chr2 85768962 85768962 1 + T C COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA CTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.204550860552738 1 0.909574627876282 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768962 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_33632 0 0 1 5 85768960 85768981 mRNA hsa-miR-27a MAT2A miRanda miRanda
14034 chr2 85768962 85768962 1 + T C COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA CTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.204550860552738 1 0.909574627876282 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768962 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_33632 0 0 1 5 85768955 85768977 mRNA hsa-miR-148a MAT2A miRanda miRanda
14034 chr2 85768962 85768962 1 + T C COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA CTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.204550860552738 1 0.909574627876282 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768962 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_33632 0 0 1 5 85768960 85768981 mRNA hsa-miR-27b MAT2A miRanda miRanda
14034 chr2 85768962 85768962 1 + T C COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA CTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.204550860552738 1 0.909574627876282 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768962 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_33632 0 0 1 5 85768956 85768977 mRNA hsa-miR-152 MAT2A miRanda miRanda
14034 chr2 85768962 85768962 1 + T C COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA CTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.204550860552738 1 0.909574627876282 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 1 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768962 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_33632 0 0 1 5 85768955 85768977 mRNA hsa-miR-148b MAT2A miRanda miRanda
14034 chr18 33739749 33739749 1 + G T COAD 33739739 + 33739719 33739759 41 CTGATGAAGAGGAGCTGTTAACTAGTACTGGTTTTGAGTAT CTGATGAAGAGGAGCTGTTAACTAGTACTGTTTTTGAGTAT < 41bp 1 0.475447668415066 1 0.730532050132751 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 ELP2 ENSG00000134759 CDS Human protein_coding chr18:33739739 chr18:33739749 nonsynonymous SNV 0.757 2 hm6A_associated_SNPs_33644 0 0 1 1 33739744 33739767 mRNA hsa-miR-370 ELP2 miRanda miRanda
14034 chr1 70820664 70820664 1 + T A COAD 70820655 + 70820635 70820675 41 ATGTTCGGTGCATGTTATAAACAACCACTTAAACCCTCCGG ATGTTCGGTGCATGTTATAAACAACCACTAAAACCCTCCGG < 41bp 1 0.47399568488004 1 0.896048069000244 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 30 HHLA3 ENSG00000197568 CDS Human protein_coding chr1:70820655 chr1:70820664 synonymous SNV . 0 hm6A_associated_SNPs_33661 0 0 1 2 70820664 70820685 mRNA hsa-miR-24 HHLA3 miRanda miRanda
14034 chr1 70820664 70820664 1 + T A COAD 70820655 + 70820635 70820675 41 ATGTTCGGTGCATGTTATAAACAACCACTTAAACCCTCCGG ATGTTCGGTGCATGTTATAAACAACCACTAAAACCCTCCGG < 41bp 1 0.47399568488004 1 0.896048069000244 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 30 HHLA3 ENSG00000197568 CDS Human protein_coding chr1:70820655 chr1:70820664 synonymous SNV . 0 hm6A_associated_SNPs_33661 0 0 1 2 70820641 70820664 mRNA hsa-miR-140-5p HHLA3 miRanda miRanda
14034 chrX 107374574 107374574 1 + G A COAD 107374575 + 107374555 107374595 41 GCTCAAGCCCTTATCTGTAGACACTTGGGAAGGGGTGAGTT GCTCAAGCCCTTATCTGTAAACACTTGGGAAGGGGTGAGTT < 41bp 1 0.508690900591987 1 0.0433513820171356 experiment 0.982618198816026 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 ATG4A ENSG00000101844 CDS Human protein_coding chrX:107374575 chrX:107374574 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_33741 0 0 0 1 107374553 107374581 mRNA hsa-miR-372 ATG4A miRanda miRanda
14034 chr6 43581826 43581826 1 + C A COAD 43581816 + 43581796 43581836 41 AGTTTCTTCCCCCCAACAAAACCCATGGTCCAACTGTAAAG AGTTTCTTCCCCCCAACAAAACCCATGGTCAAACTGTAAAG < 41bp 1 0.549333708722913 1 0.96950352191925 experiment 0.901332582554175 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 POLH ENSG00000170734 CDS Human protein_coding chr6:43581816 chr6:43581826 synonymous SNV . 0 hm6A_associated_SNPs_33844 0 0 1 1 43581816 43581842 mRNA hsa-miR-155 POLH miRanda miRanda
14034 chr6 43581826 43581826 1 + C A COAD 43581846 + 43581826 43581866 41 CAACTGTAAAGCATTACCAAACTCTTTACCAACAGAGTATC AAACTGTAAAGCATTACCAAACTCTTTACCAACAGAGTATC < 41bp 1 0.738919110683238 1 0.965421795845032 experiment 0.522161778633523 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown|30867593;GSE121942;miCLIP;HepG2;Control 1 POLH ENSG00000170734 CDS Human protein_coding chr6:43581846 chr6:43581826 synonymous SNV . 0 hm6A_associated_SNPs_33845 0 0 1 1 43581816 43581842 mRNA hsa-miR-155 POLH miRanda miRanda
14034 chr1 53236946 53236946 1 + G A COAD 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTGAATTCATTAACTCTCTCCCTCAAGGATCCT < 41bp 1 0.704844089565725 1 0.918747305870056 experiment 0.59031182086855 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236946 nonsynonymous SNV 0.106 3 hm6A_associated_SNPs_33882 0 0 1 1 53236943 53236968 mRNA hsa-miR-503 ZYG11B miRanda miRanda
14034 chr3 122811274 122811274 1 + G T COAD 122811260 + 122811240 122811280 41 GTGGCCCAGGCGGTGAAAGGACAAGGGACCATCTGCTGGGT GTGGCCCAGGCGGTGAAAGGACAAGGGACCATCTTCTGGGT < 41bp 1 0.744192077194729 1 0.821676969528198 experiment 0.511615845610541 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 35 PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122811260 chr3:122811274 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_33897 0 0 1 1 122811274 122811289 mRNA hsa-miR-197 PDIA5 miRanda miRanda
14034 chr2 27278919 27278919 1 + C T COAD 27278936 + 27278916 27278956 41 TGGCGTTGCTTACTATGTGGACCTGCATGGACATGCTTCCA TGGTGTTGCTTACTATGTGGACCTGCATGGACATGCTTCCA < 41bp 1 0.441508501116254 1 0.958656787872314 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 4 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278936 chr2:27278919 synonymous SNV . 0 hm6A_associated_SNPs_33929 0 0 1 1 27278913 27278934 mRNA hsa-miR-376c AGBL5 miRanda miRanda
14034 chrX 155171688 155171688 1 + T A COAD 155171679 + 155171659 155171699 41 AGTTAAAAGCAATCCATGTGACTCAAGCCTTTCACATACTG AGTTAAAAGCAATCCATGTGACTCAAGCCATTCACATACTG < 41bp 1 0.779823246969491 1 0.60808527469635 experiment 0.440353506061018 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 30 VAMP7 ENSG00000124333 CDS Human protein_coding chrX:155171679 chrX:155171688 nonsynonymous SNV 0.625 1 hm6A_associated_SNPs_33931 0 0 1 1 155171670 155171693 mRNA hsa-miR-488 VAMP7 miRanda miRanda
14034 chr5 76332475 76332475 1 + A C COAD 76332477 + 76332457 76332497 41 CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATGAA CAGAAGCGGCTGTATCACCGACTGGATTTAGTTATGATGAA Direct Loss 1 0.480468853776096 1 0.952777504920959 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332477 chr5:76332475 nonsynonymous SNV 0.996 5 hm6A_associated_SNPs_33966 0 0 1 1 76332461 76332483 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGCA < 41bp 1 0.67932813026492 1 0.600922703742981 experiment 0.64134373947016 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34020 0 0 1 4 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGCA < 41bp 1 0.67932813026492 1 0.600922703742981 experiment 0.64134373947016 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34020 0 0 1 4 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGCA < 41bp 1 0.67932813026492 1 0.600922703742981 experiment 0.64134373947016 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34020 0 0 1 4 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575136 + 48575116 48575156 41 CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGTA CTTCACAAAAATGAACTAAAACATGTTAAATATTGTCAGCA < 41bp 1 0.67932813026492 1 0.600922703742981 experiment 0.64134373947016 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575136 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34020 0 0 1 4 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGCATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.578069902956687 1 0.666546106338501 experiment 0.843860194086626 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34021 0 0 1 4 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGCATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.578069902956687 1 0.666546106338501 experiment 0.843860194086626 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34021 0 0 1 4 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGCATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.578069902956687 1 0.666546106338501 experiment 0.843860194086626 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34021 0 0 1 4 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575155 48575155 1 + T C COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGCATGCGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.578069902956687 1 0.666546106338501 experiment 0.843860194086626 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575155 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_34021 0 0 1 4 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chr8 23115942 23115942 1 + G A COAD 23115931 + 23115911 23115951 41 CACTGTTCAAGGCATCCTGGACCGGATCTATGCCTCCCAGA CACTGTTCAAGGCATCCTGGACCGGATCTATACCTCCCAGA < 41bp 1 0.125957083736217 1 0.932606160640717 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23115931 chr8:23115942 nonsynonymous SNV 0.986 2 hm6A_associated_SNPs_34054 0 0 1 1 23115925 23115945 mRNA hsa-miR-31 CHMP7 miRanda miRanda
14034 chr16 30095076 30095076 1 + G A COAD 30095094 + 30095074 30095114 41 GTGTGACCTCCTCTGGTCTGACCCAGAAGGTGAGGGCATGT GTATGACCTCCTCTGGTCTGACCCAGAAGGTGAGGGCATGT < 41bp 1 0.10319786817746 1 0.71714586019516 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 3 PPP4C ENSG00000149923 CDS Human protein_coding chr16:30095094 chr16:30095076 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_34060 0 0 1 2 30095059 30095080 mRNA hsa-miR-377 PPP4C miRanda miRanda
14034 chr16 30095076 30095076 1 + G A COAD 30095094 + 30095074 30095114 41 GTGTGACCTCCTCTGGTCTGACCCAGAAGGTGAGGGCATGT GTATGACCTCCTCTGGTCTGACCCAGAAGGTGAGGGCATGT < 41bp 1 0.10319786817746 1 0.71714586019516 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 3 PPP4C ENSG00000149923 CDS Human protein_coding chr16:30095094 chr16:30095076 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_34060 0 0 1 2 30095076 30095097 mRNA hsa-miR-379 PPP4C miRanda miRanda
14034 chr2 210884510 210884510 1 + C T COAD 210884517 + 210884497 210884537 41 ACGTTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGTTC ACGTTCTCTTGATTGGTGAAACCATAAGGAGCCCAGTGTTC < 41bp 1 0.332406528866872 1 0.616042852401733 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 RPE ENSG00000197713 CDS Human protein_coding chr2:210884517 chr2:210884510 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_34128 0 0 1 2 210884508 210884533 mRNA hsa-miR-149 RPE miRanda miRanda
14034 chr2 210884510 210884510 1 + C T COAD 210884517 + 210884497 210884537 41 ACGTTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGTTC ACGTTCTCTTGATTGGTGAAACCATAAGGAGCCCAGTGTTC < 41bp 1 0.332406528866872 1 0.616042852401733 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 RPE ENSG00000197713 CDS Human protein_coding chr2:210884517 chr2:210884510 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_34128 0 0 1 2 210884489 210884511 mRNA hsa-miR-383 RPE miRanda miRanda
14034 chr17 57270933 57270933 1 + C T COAD 57270953 + 57270933 57270973 41 CGTTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC TGTTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC < 41bp 1 0.121969736907332 1 0.168812245130539 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270953 chr17:57270933 synonymous SNV . 0 hm6A_associated_SNPs_34185 0 0 1 2 57270911 57270933 mRNA hsa-miR-214 PRR11 miRanda miRanda
14034 chr17 57270933 57270933 1 + C T COAD 57270953 + 57270933 57270973 41 CGTTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC TGTTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC < 41bp 1 0.121969736907332 1 0.168812245130539 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270953 chr17:57270933 synonymous SNV . 0 hm6A_associated_SNPs_34185 0 0 1 2 57270922 57270943 mRNA hsa-miR-383 PRR11 miRanda miRanda
14034 chr15 79183864 79183864 1 + C T COAD 79183861 + 79183841 79183881 41 ATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTCGGAAG ATGGTGGCAGTACCAGTGAGACCTCTCAGCCTCCTCGGAAG < 41bp 1 0.115872579837719 1 0.868285059928894 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 24 MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79183861 chr15:79183864 nonsynonymous SNV 0.981 1 hm6A_associated_SNPs_34195 0 0 1 1 79183853 79183874 mRNA hsa-miR-485-5p MORF4L1 miRanda miRanda
14034 chr5 162945268 162945268 1 + A G COAD 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGGCCT < 41bp 1 0.727296843537951 1 0.9331214427948 experiment 0.545406312924098 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945268 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_34196 0 0 1 2 162945262 162945286 mRNA hsa-miR-182 MAT2B miRanda miRanda
14034 chr5 162945268 162945268 1 + A G COAD 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGGCCT < 41bp 1 0.727296843537951 1 0.9331214427948 experiment 0.545406312924098 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945268 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_34196 0 0 1 2 162945259 162945280 mRNA hsa-miR-365 MAT2B miRanda miRanda
14034 chr11 62651968 62651968 1 + T C COAD 62651981 + 62651961 62652001 41 GGATGGGTTCCAGGTTCGGGACATAGAGAATCTGAAGGTGA GGATGGGCTCCAGGTTCGGGACATAGAGAATCTGAAGGTGA < 41bp 1 0.437135107841564 1 0.0159403383731842 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62651981 chr11:62651968 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_34197 0 0 1 1 62651955 62651977 mRNA hsa-miR-490-3p SLC3A2 miRanda miRanda
14034 chr12 110029061 110029061 1 + G A COAD 110029073 + 110029053 110029093 41 AGATCGTGGCCCCCCTCCTGACCTCAATAGATGCCATCTCC AGATCGTGACCCCCCTCCTGACCTCAATAGATGCCATCTCC < 41bp 1 0.157429999819502 1 0.0505219101905823 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MVK ENSG00000110921 CDS Human protein_coding chr12:110029073 chr12:110029061 nonsynonymous SNV 0.869 1 hm6A_associated_SNPs_34252 0 0 1 1 110029056 110029078 mRNA hsa-let-7e MVK miRanda miRanda
14034 chr2 135911339 135911339 1 + C T COAD 135911329 + 135911309 135911349 41 AATGTGGTGCTGAAAGGAGAACTGAGTGCCCGGATGAAGAT AATGTGGTGCTGAAAGGAGAACTGAGTGCCTGGATGAAGAT < 41bp 1 0.394057494830052 1 0.639671683311462 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135911329 chr2:135911339 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_34278 0 0 1 1 135911329 135911351 mRNA hsa-miR-216a RAB3GAP1 miRanda miRanda
14034 chr2 202131233 202131233 1 + T A COAD 202131214 + 202131194 202131234 41 CCTGCCTTTTAAAAAGATGGACTTCAGCAGAAATCTTTATG CCTGCCTTTTAAAAAGATGGACTTCAGCAGAAATCTTTAAG < 41bp 1 0.344337931316169 1 0.979309856891632 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202131214 chr2:202131233 stopgain 0.000 0 hm6A_associated_SNPs_34288 0 0 1 1 202131231 202131254 mRNA hsa-miR-145 CASP8 miRanda miRanda
14034 chr6 43565442 43565442 1 + G A COAD 43565446 + 43565426 43565466 41 ATTTCAGAGGGGATGCGAAAACAAGGCTTATTTCAATGGCT ATTTCAGAGGGGATGCAAAAACAAGGCTTATTTCAATGGCT < 41bp 1 0.581938540814679 1 0.104902386665344 experiment 0.836122918370641 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 POLH ENSG00000170734 CDS Human protein_coding chr6:43565446 chr6:43565442 nonsynonymous SNV 0.955 3 hm6A_associated_SNPs_34299 0 0 0 1 43565433 43565442 mRNA hsa-miR-324-5p POLH miRanda miRanda
14034 chr1 109321994 109321994 1 + G T COAD 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATTGC < 41bp 1 0.332808313321066 1 0.445476919412613 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321994 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_34301 0 0 0 2 109321988 109322013 mRNA hsa-miR-196a STXBP3 miRanda miRanda
14034 chr1 109321994 109321994 1 + G T COAD 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATTGC < 41bp 1 0.332808313321066 1 0.445476919412613 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321994 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_34301 0 0 0 2 109321988 109322013 mRNA hsa-miR-196b STXBP3 miRanda miRanda
14034 chr9 35660866 35660866 1 + G A COAD 35660851 + 35660831 35660871 41 AAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGG AAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCAGGAGG < 41bp 1 0.66875674930238 1 0.9930180311203 experiment 0.662486501395239 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 36 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660851 chr9:35660866 synonymous SNV . 0 hm6A_associated_SNPs_34399 0 0 1 1 35660847 35660868 mRNA hsa-miR-615-3p CCDC107 miRanda miRanda
14034 chr5 72798354 72798354 1 + C T COAD 72798349 + 72798329 72798369 41 AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATGACAAA AGAAGAAGGTGGTTCATAGAACAGCTACAGCAGATGACAAA < 41bp 1 0.531067876668373 1 0.680826902389526 experiment 0.937864246663254 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798349 chr5:72798354 synonymous SNV . 0 hm6A_associated_SNPs_34402 0 0 1 1 72798352 72798372 mRNA hsa-miR-129-5p BTF3 miRanda miRanda
14034 chr5 72798354 72798354 1 + C T COAD 72798372 + 72798352 72798392 41 GCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA GCTACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA < 41bp 1 0.463207392428235 1 0.725272297859192 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798372 chr5:72798354 synonymous SNV . 0 hm6A_associated_SNPs_34403 0 0 1 1 72798352 72798372 mRNA hsa-miR-129-5p BTF3 miRanda miRanda
14034 chr1 52215846 52215846 1 + T C COAD 52215837 + 52215817 52215857 41 AGCATGGTAGAATCAATTAAACACTGCATTGTGTTGCTGCA AGCATGGTAGAATCAATTAAACACTGCATCGTGTTGCTGCA < 41bp 1 0.531812614264818 1 0.0148122012615204 experiment 0.936374771470365 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52215837 chr1:52215846 synonymous SNV . 0 hm6A_associated_SNPs_34419 0 0 1 2 52215842 52215867 mRNA hsa-miR-182 OSBPL9 miRanda miRanda
14034 chr1 52215846 52215846 1 + T C COAD 52215837 + 52215817 52215857 41 AGCATGGTAGAATCAATTAAACACTGCATTGTGTTGCTGCA AGCATGGTAGAATCAATTAAACACTGCATCGTGTTGCTGCA < 41bp 1 0.531812614264818 1 0.0148122012615204 experiment 0.936374771470365 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52215837 chr1:52215846 synonymous SNV . 0 hm6A_associated_SNPs_34419 0 0 1 2 52215840 52215862 mRNA hsa-miR-216a OSBPL9 miRanda miRanda
14034 chr2 85768977 85768977 1 + A G COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACTGGTGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.162791275728333 1 0.888151943683624 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768977 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_34423 0 0 1 5 85768960 85768981 mRNA hsa-miR-27a MAT2A miRanda miRanda
14034 chr2 85768977 85768977 1 + A G COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACTGGTGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.162791275728333 1 0.888151943683624 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768977 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_34423 0 0 1 5 85768955 85768977 mRNA hsa-miR-148a MAT2A miRanda miRanda
14034 chr2 85768977 85768977 1 + A G COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACTGGTGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.162791275728333 1 0.888151943683624 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768977 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_34423 0 0 1 5 85768960 85768981 mRNA hsa-miR-27b MAT2A miRanda miRanda
14034 chr2 85768977 85768977 1 + A G COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACTGGTGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.162791275728333 1 0.888151943683624 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768977 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_34423 0 0 1 5 85768956 85768977 mRNA hsa-miR-152 MAT2A miRanda miRanda
14034 chr2 85768977 85768977 1 + A G COAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACTGGTGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.162791275728333 1 0.888151943683624 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768977 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_34423 0 0 1 5 85768955 85768977 mRNA hsa-miR-148b MAT2A miRanda miRanda
14034 chr4 146560523 146560523 1 + C T COAD 146560509 + 146560489 146560529 41 TGTACAAACAACCTTAAAGGACCACACAGAAGGACTTTCTG TGTACAAACAACCTTAAAGGACCACACAGAAGGATTTTCTG < 41bp 1 0.432602914848723 1 0.980807781219482 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 MMAA ENSG00000151611 CDS Human protein_coding chr4:146560509 chr4:146560523 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_34472 0 0 0 2 146560512 146560533 mRNA hsa-miR-361-5p MMAA miRanda miRanda
14034 chr4 146560523 146560523 1 + C T COAD 146560509 + 146560489 146560529 41 TGTACAAACAACCTTAAAGGACCACACAGAAGGACTTTCTG TGTACAAACAACCTTAAAGGACCACACAGAAGGATTTTCTG < 41bp 1 0.432602914848723 1 0.980807781219482 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 MMAA ENSG00000151611 CDS Human protein_coding chr4:146560509 chr4:146560523 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_34472 0 0 0 2 146560512 146560533 mRNA hsa-miR-383 MMAA miRanda miRanda
14034 chr4 146560523 146560523 1 + C T COAD 146560522 + 146560502 146560542 41 TTAAAGGACCACACAGAAGGACTTTCTGATAAAGAGCAAAG TTAAAGGACCACACAGAAGGATTTTCTGATAAAGAGCAAAG Direct Loss 1 0.698871995215332 1 0.978342175483704 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 MMAA ENSG00000151611 CDS Human protein_coding chr4:146560522 chr4:146560523 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_34473 0 0 0 2 146560512 146560533 mRNA hsa-miR-361-5p MMAA miRanda miRanda
14034 chr4 146560523 146560523 1 + C T COAD 146560522 + 146560502 146560542 41 TTAAAGGACCACACAGAAGGACTTTCTGATAAAGAGCAAAG TTAAAGGACCACACAGAAGGATTTTCTGATAAAGAGCAAAG Direct Loss 1 0.698871995215332 1 0.978342175483704 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 MMAA ENSG00000151611 CDS Human protein_coding chr4:146560522 chr4:146560523 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_34473 0 0 0 2 146560512 146560533 mRNA hsa-miR-383 MMAA miRanda miRanda
14034 chr12 57906610 57906610 1 + G A COAD 57906606 + 57906586 57906626 41 GTTTGGGGACATGGCCCAGGACACGGGGATCCCTGCTGACA GTTTGGGGACATGGCCCAGGACACAGGGATCCCTGCTGACA < 41bp 1 0.791418835268312 1 0.0821636021137238 experiment 0.417162329463377 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 MARS ENSG00000166986 CDS Human protein_coding chr12:57906606 chr12:57906610 synonymous SNV . 0 hm6A_associated_SNPs_34491 0 0 1 1 57906603 57906624 mRNA hsa-miR-214 MARS miRanda miRanda
14034 chr12 57906610 57906610 1 + G A COAD 57906624 + 57906604 57906644 41 GGACACGGGGATCCCTGCTGACATCTGGCGCTTCTATCTGC GGACACAGGGATCCCTGCTGACATCTGGCGCTTCTATCTGC < 41bp 1 0.78198729592134 1 0.0929721593856812 experiment 0.43602540815732 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 MARS ENSG00000166986 CDS Human protein_coding chr12:57906624 chr12:57906610 synonymous SNV . 0 hm6A_associated_SNPs_34492 0 0 1 1 57906603 57906624 mRNA hsa-miR-214 MARS miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035270 27035292 mRNA hsa-let-7a PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035271 27035292 mRNA hsa-let-7b PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035271 27035292 mRNA hsa-let-7c PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035267 27035292 mRNA hsa-let-7d PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035270 27035292 mRNA hsa-let-7e PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035270 27035292 mRNA hsa-let-7f PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035272 27035292 mRNA hsa-miR-98 PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035290 27035308 mRNA hsa-miR-34a PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035289 27035310 mRNA hsa-miR-183 PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035270 27035292 mRNA hsa-let-7g PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035269 27035292 mRNA hsa-let-7i PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035286 27035308 mRNA hsa-miR-34c-5p PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035289 27035308 mRNA hsa-miR-449a PDSS1 miRanda miRanda
14034 chr10 27035292 27035292 1 + G A COAD 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGATGGTGTGCAACAAACAACCTACCTCACCCAGCAG < 41bp 1 0.693595696038815 1 0.713879227638245 experiment 0.61280860792237 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035292 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_34516 0 0 1 14 27035289 27035308 mRNA hsa-miR-449b PDSS1 miRanda miRanda
14034 chr3 152018023 152018023 1 + T C COAD 152018011 + 152017991 152018031 41 TAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGG TAGTGTCACACCAATTCGGGACACAAAATGGCCAACACTGG < 41bp 1 0.592653272937703 1 0.89345109462738 experiment 0.814693454124594 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018011 chr3:152018023 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_34564 0 0 1 3 152018011 152018032 mRNA hsa-miR-199a-5p MBNL1 miRanda miRanda
14034 chr3 152018023 152018023 1 + T C COAD 152018011 + 152017991 152018031 41 TAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGG TAGTGTCACACCAATTCGGGACACAAAATGGCCAACACTGG < 41bp 1 0.592653272937703 1 0.89345109462738 experiment 0.814693454124594 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018011 chr3:152018023 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_34564 0 0 1 3 152018011 152018032 mRNA hsa-miR-199b-5p MBNL1 miRanda miRanda
14034 chr3 152018023 152018023 1 + T C COAD 152018011 + 152017991 152018031 41 TAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGG TAGTGTCACACCAATTCGGGACACAAAATGGCCAACACTGG < 41bp 1 0.592653272937703 1 0.89345109462738 experiment 0.814693454124594 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018011 chr3:152018023 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_34564 0 0 1 3 152018010 152018033 mRNA hsa-miR-145 MBNL1 miRanda miRanda
14034 chr20 21142689 21142689 1 + C T COAD 21142675 + 21142655 21142695 41 AAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGA AAAGAACTTTTCAATTCCTGACCCACATTCACACTGACAGA < 41bp 1 0.315603648007413 1 0.382310569286346 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142675 chr20:21142689 . 0.998 0 hm6A_associated_SNPs_34572 0 0 1 2 21142686 21142706 mRNA hsa-miR-330-5p PLK1S1 miRanda miRanda
14034 chr20 21142689 21142689 1 + C T COAD 21142675 + 21142655 21142695 41 AAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGA AAAGAACTTTTCAATTCCTGACCCACATTCACACTGACAGA < 41bp 1 0.315603648007413 1 0.382310569286346 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142675 chr20:21142689 . 0.998 0 hm6A_associated_SNPs_34572 0 0 1 2 21142687 21142706 mRNA hsa-miR-326 PLK1S1 miRanda miRanda
14034 chr20 21142689 21142689 1 + C T COAD 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACTGACAGACAGCCCAGAGCAGTAATGTG < 41bp 1 0.495257433775369 1 0.68167632818222 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142689 . 0.998 0 hm6A_associated_SNPs_34573 0 0 1 2 21142686 21142706 mRNA hsa-miR-330-5p PLK1S1 miRanda miRanda
14034 chr20 21142689 21142689 1 + C T COAD 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACTGACAGACAGCCCAGAGCAGTAATGTG < 41bp 1 0.495257433775369 1 0.68167632818222 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142689 . 0.998 0 hm6A_associated_SNPs_34573 0 0 1 2 21142687 21142706 mRNA hsa-miR-326 PLK1S1 miRanda miRanda
14034 chr17 76396804 76396804 1 + G A COAD 76396796 + 76396776 76396816 41 CTACTTCACCAACCGCCAGGACCGCTACGTGTTCCTGCAGG CTACTTCACCAACCGCCAGGACCGCTACATGTTCCTGCAGG < 41bp 1 0.170389271077509 1 0.660987973213196 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 PGS1 ENSG00000087157 CDS Human protein_coding chr17:76396796 chr17:76396804 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_34609 0 0 1 1 76396794 76396813 mRNA hsa-miR-873 PGS1 miRanda miRanda
14034 chr4 15589482 15589482 1 + T C COAD 15589474 + 15589454 15589494 41 CTGGCAGGGGATGAAGAAGAACATGCAGTACTATTGTGTAA CTGGCAGGGGATGAAGAAGAACATGCAGCACTATTGTGTAA < 41bp 1 0.50137175183353 1 0.384984314441681 experiment 0.997256496332939 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 CC2D2A ENSG00000048342 CDS Human protein_coding chr4:15589474 chr4:15589482 nonsynonymous SNV 0.991 3 hm6A_associated_SNPs_34650 0 0 0 1 15589461 15589483 mRNA hsa-miR-217 CC2D2A miRanda miRanda
14034 chr11 71169524 71169524 1 + C T COAD 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGACACCCTCTTGCACTTGTTTC < 41bp 1 0.490506851017825 1 0.923247039318085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169524 nonsynonymous SNV 0.297 5 hm6A_associated_SNPs_34693 0 0 1 6 71169503 71169524 mRNA hsa-miR-130a NADSYN1 miRanda miRanda
14034 chr11 71169524 71169524 1 + C T COAD 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGACACCCTCTTGCACTTGTTTC < 41bp 1 0.490506851017825 1 0.923247039318085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169524 nonsynonymous SNV 0.297 5 hm6A_associated_SNPs_34693 0 0 1 6 71169503 71169524 mRNA hsa-miR-301a NADSYN1 miRanda miRanda
14034 chr11 71169524 71169524 1 + C T COAD 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGACACCCTCTTGCACTTGTTTC < 41bp 1 0.490506851017825 1 0.923247039318085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169524 nonsynonymous SNV 0.297 5 hm6A_associated_SNPs_34693 0 0 1 6 71169504 71169524 mRNA hsa-miR-130b NADSYN1 miRanda miRanda
14034 chr11 71169524 71169524 1 + C T COAD 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGACACCCTCTTGCACTTGTTTC < 41bp 1 0.490506851017825 1 0.923247039318085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169524 nonsynonymous SNV 0.297 5 hm6A_associated_SNPs_34693 0 0 1 6 71169518 71169539 mRNA hsa-miR-378 NADSYN1 miRanda miRanda
14034 chr11 71169524 71169524 1 + C T COAD 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGACACCCTCTTGCACTTGTTTC < 41bp 1 0.490506851017825 1 0.923247039318085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169524 nonsynonymous SNV 0.297 5 hm6A_associated_SNPs_34693 0 0 1 6 71169502 71169524 mRNA hsa-miR-454 NADSYN1 miRanda miRanda
14034 chr11 71169524 71169524 1 + C T COAD 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGACACCCTCTTGCACTTGTTTC < 41bp 1 0.490506851017825 1 0.923247039318085 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169524 nonsynonymous SNV 0.297 5 hm6A_associated_SNPs_34693 0 0 1 6 71169503 71169524 mRNA hsa-miR-301b NADSYN1 miRanda miRanda
14034 chr3 39453518 39453518 1 + G T COAD 39453499 + 39453479 39453519 41 TACTCAGCCTGAGGTTGCAGACTGGTCTGAAGGTGTACAGG TACTCAGCCTGAGGTTGCAGACTGGTCTGAAGGTGTACATG < 41bp 1 0.189700146462805 1 0.917909979820251 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 RPSA ENSG00000168028 CDS Human protein_coding chr3:39453499 chr3:39453518 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_34845 0 0 1 1 39453501 39453520 mRNA hsa-miR-486-5p RPSA miRanda miRanda
14034 chr11 76917223 76917223 1 + C T COAD 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTTTACTTCCCTGATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.189289791405691 1 0.752388000488281 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917223 synonymous SNV . 0 hm6A_associated_SNPs_34914 0 0 0 4 76917223 76917245 mRNA hsa-miR-223 MYO7A miRanda miRanda
14034 chr11 76917223 76917223 1 + C T COAD 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTTTACTTCCCTGATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.189289791405691 1 0.752388000488281 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917223 synonymous SNV . 0 hm6A_associated_SNPs_34914 0 0 0 4 76917222 76917243 mRNA hsa-miR-152 MYO7A miRanda miRanda
14034 chr11 76917223 76917223 1 + C T COAD 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTTTACTTCCCTGATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.189289791405691 1 0.752388000488281 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917223 synonymous SNV . 0 hm6A_associated_SNPs_34914 0 0 0 4 76917221 76917243 mRNA hsa-miR-148b MYO7A miRanda miRanda
14034 chr11 76917223 76917223 1 + C T COAD 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTTTACTTCCCTGATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.189289791405691 1 0.752388000488281 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917223 synonymous SNV . 0 hm6A_associated_SNPs_34914 0 0 0 4 76917208 76917228 mRNA hsa-miR-411 MYO7A miRanda miRanda
14034 chr1 211486259 211486259 1 + G A COAD 211486250 + 211486230 211486270 41 CTTCTACTTTAGGGGAGGAGACAAAAAGTGCTTCTAATGTG CTTCTACTTTAGGGGAGGAGACAAAAAGTACTTCTAATGTG < 41bp 1 0.703352823903243 1 0.967294096946716 experiment 0.593294352193514 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486250 chr1:211486259 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_34941 0 0 1 1 211486255 211486275 mRNA hsa-miR-183 RCOR3 miRanda miRanda
14034 chr19 50906852 50906852 1 + A T COAD 50906846 + 50906826 50906866 41 ACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGG ACCTCATCTCTCGGGCCCAGACCCTCTAGGTGAGGGCTGGG < 41bp 1 0.0502271795829904 1 0.868218064308167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906846 chr19:50906852 stopgain 0.996 1 hm6A_associated_SNPs_34968 0 0 1 3 50906847 50906854 mRNA hsa-miR-1 POLD1 miRanda miRanda
14034 chr19 50906852 50906852 1 + A T COAD 50906846 + 50906826 50906866 41 ACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGG ACCTCATCTCTCGGGCCCAGACCCTCTAGGTGAGGGCTGGG < 41bp 1 0.0502271795829904 1 0.868218064308167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906846 chr19:50906852 stopgain 0.996 1 hm6A_associated_SNPs_34968 0 0 1 3 50906847 50906854 mRNA hsa-miR-206 POLD1 miRanda miRanda
14034 chr19 50906852 50906852 1 + A T COAD 50906846 + 50906826 50906866 41 ACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGG ACCTCATCTCTCGGGCCCAGACCCTCTAGGTGAGGGCTGGG < 41bp 1 0.0502271795829904 1 0.868218064308167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906846 chr19:50906852 stopgain 0.996 1 hm6A_associated_SNPs_34968 0 0 1 3 50906849 50906854 mRNA hsa-miR-613 POLD1 miRanda miRanda
14034 chr2 71635297 71635297 1 + A G COAD 71635308 + 71635288 71635328 41 TCAATGTATAGCTTTCTGAAACAAAATCCACAAAATATTGG TCAATGTATGGCTTTCTGAAACAAAATCCACAAAATATTGG < 41bp 1 0.783434551148207 1 0.0833373367786407 experiment 0.433130897703587 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 10 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71635308 chr2:71635297 nonsynonymous SNV 0.978 0 hm6A_associated_SNPs_34977 0 0 1 1 71635295 71635317 mRNA hsa-miR-876-5p ZNF638 miRanda miRanda
14034 chr19 10795546 10795546 1 + T A COAD 10795564 + 10795544 10795584 41 TATGAATTTTTAACCTTTTAACAAACTCCCAAATCTGGTTG TAAGAATTTTTAACCTTTTAACAAACTCCCAAATCTGGTTG < 41bp 1 0.31133502242276 1 0.89297741651535 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ILF3 ENSG00000129351 CDS Human protein_coding chr19:10795564 chr19:10795546 stoploss 1.000 0 hm6A_associated_SNPs_34988 0 0 1 3 10795539 10795560 mRNA hsa-miR-154 ILF3 miRanda miRanda
14034 chr19 10795546 10795546 1 + T A COAD 10795564 + 10795544 10795584 41 TATGAATTTTTAACCTTTTAACAAACTCCCAAATCTGGTTG TAAGAATTTTTAACCTTTTAACAAACTCCCAAATCTGGTTG < 41bp 1 0.31133502242276 1 0.89297741651535 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ILF3 ENSG00000129351 CDS Human protein_coding chr19:10795564 chr19:10795546 stoploss 1.000 0 hm6A_associated_SNPs_34988 0 0 1 3 10795527 10795547 mRNA hsa-miR-381 ILF3 miRanda miRanda
14034 chr19 10795546 10795546 1 + T A COAD 10795564 + 10795544 10795584 41 TATGAATTTTTAACCTTTTAACAAACTCCCAAATCTGGTTG TAAGAATTTTTAACCTTTTAACAAACTCCCAAATCTGGTTG < 41bp 1 0.31133502242276 1 0.89297741651535 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ILF3 ENSG00000129351 CDS Human protein_coding chr19:10795564 chr19:10795546 stoploss 1.000 0 hm6A_associated_SNPs_34988 0 0 1 3 10795527 10795547 mRNA hsa-miR-300 ILF3 miRanda miRanda
14034 chr14 74532032 74532032 1 + A G COAD 74532049 + 74532029 74532069 41 CCAAAAATCTCCTCTTTGTAACAGGTCATATTTGGCTGCCA CCAGAAATCTCCTCTTTGTAACAGGTCATATTTGGCTGCCA < 41bp 1 0.716961675256753 1 0.939852476119995 experiment 0.566076649486494 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74532049 chr14:74532032 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_35050 0 0 0 2 74532012 74532033 mRNA hsa-miR-133a C14orf45 miRanda miRanda
14034 chr14 74532032 74532032 1 + A G COAD 74532049 + 74532029 74532069 41 CCAAAAATCTCCTCTTTGTAACAGGTCATATTTGGCTGCCA CCAGAAATCTCCTCTTTGTAACAGGTCATATTTGGCTGCCA < 41bp 1 0.716961675256753 1 0.939852476119995 experiment 0.566076649486494 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74532049 chr14:74532032 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_35050 0 0 0 2 74532012 74532033 mRNA hsa-miR-133b C14orf45 miRanda miRanda
14034 chr10 115663313 115663313 1 + A C COAD 115663314 + 115663294 115663334 41 TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGGAA TGTGGATCCAAAAACAAAACACTGTACAACATTAGCAGGAA Direct Loss 1 0.212608387682098 1 0.908712029457092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115663314 chr10:115663313 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_35077 0 0 1 2 115663300 115663321 mRNA hsa-miR-139-5p NHLRC2 miRanda miRanda
14034 chr10 115663313 115663313 1 + A C COAD 115663314 + 115663294 115663334 41 TGTGGATCCAAAAACAAAAAACTGTACAACATTAGCAGGAA TGTGGATCCAAAAACAAAACACTGTACAACATTAGCAGGAA Direct Loss 1 0.212608387682098 1 0.908712029457092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115663314 chr10:115663313 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_35077 0 0 1 2 115663312 115663333 mRNA hsa-miR-370 NHLRC2 miRanda miRanda
14034 chrX 23801802 23801802 1 + G T COAD 23801804 + 23801784 23801824 41 AAATATGAATACATGGAAGAACAAGTAATCTTAACTGAAAA AAATATGAATACATGGAATAACAAGTAATCTTAACTGAAAA < 41bp 1 0.537176113009653 1 0.981471180915833 experiment 0.925647773980695 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23801804 chrX:23801802 stopgain 0.996 0 hm6A_associated_SNPs_35094 0 0 1 2 23801802 23801823 mRNA hsa-miR-223 SAT1 miRanda miRanda
14034 chrX 23801802 23801802 1 + G T COAD 23801804 + 23801784 23801824 41 AAATATGAATACATGGAAGAACAAGTAATCTTAACTGAAAA AAATATGAATACATGGAATAACAAGTAATCTTAACTGAAAA < 41bp 1 0.537176113009653 1 0.981471180915833 experiment 0.925647773980695 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23801804 chrX:23801802 stopgain 0.996 0 hm6A_associated_SNPs_35094 0 0 1 2 23801787 23801808 mRNA hsa-miR-375 SAT1 miRanda miRanda
14034 chr1 211486160 211486160 1 + C T COAD 211486149 + 211486129 211486169 41 AGTGAAGAACTTCTTTGTAAACTACAGGCGTCGGTTTAACT AGTGAAGAACTTCTTTGTAAACTACAGGCGTTGGTTTAACT < 41bp 1 0.261918532487437 1 0.911128997802734 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 32 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486149 chr1:211486160 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_35103 0 0 1 2 211486136 211486160 mRNA hsa-miR-10a RCOR3 miRanda miRanda
14034 chr1 211486160 211486160 1 + C T COAD 211486149 + 211486129 211486169 41 AGTGAAGAACTTCTTTGTAAACTACAGGCGTCGGTTTAACT AGTGAAGAACTTCTTTGTAAACTACAGGCGTTGGTTTAACT < 41bp 1 0.261918532487437 1 0.911128997802734 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 32 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486149 chr1:211486160 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_35103 0 0 1 2 211486140 211486163 mRNA hsa-miR-615-3p RCOR3 miRanda miRanda
14034 chr17 10608607 10608607 1 + A G COAD 10608587 + 10608567 10608607 41 GGGAAACCATGAATTCTATAACTTCAGTAGAGAGTATTTAA GGGAAACCATGAATTCTATAACTTCAGTAGAGAGTATTTAG < 41bp 1 0.624969502471655 1 0.964193999767303 experiment 0.75006099505669 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608587 chr17:10608607 nonsynonymous SNV 0.822 1 hm6A_associated_SNPs_35118 0 0 1 1 10608594 10608616 mRNA hsa-miR-122 C17orf48 miRanda miRanda
14034 chr17 10608607 10608607 1 + A G COAD 10608618 + 10608598 10608638 41 GAGTATTTAACACACTCTAAACTTAACACTAAGTTTCTAGA GAGTATTTAGCACACTCTAAACTTAACACTAAGTTTCTAGA < 41bp 1 0.746284857039865 1 0.960178017616272 experiment 0.507430285920271 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 10 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608618 chr17:10608607 nonsynonymous SNV 0.822 1 hm6A_associated_SNPs_35119 0 0 1 1 10608594 10608616 mRNA hsa-miR-122 C17orf48 miRanda miRanda
14034 chr8 96047722 96047722 1 + G A COAD 96047706 + 96047686 96047726 41 AAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATG AAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCAAATG < 41bp 1 0.74321652657219 1 0.909683763980865 experiment 0.513566946855621 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047706 chr8:96047722 nonsynonymous SNV 0.995 5 hm6A_associated_SNPs_35124 0 0 1 1 96047705 96047731 mRNA hsa-miR-217 C8orf38 miRanda miRanda
14034 chr1 47838753 47838753 1 + G A COAD 47838766 + 47838746 47838786 41 ATCTTTCGTTCTCTTTTTTGACTGTAATAATGAGGTAATGA ATCTTTCATTCTCTTTTTTGACTGTAATAATGAGGTAATGA < 41bp 1 0.161059255905866 1 0.937490582466125 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838766 chr1:47838753 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_35130 0 0 1 2 47838752 47838772 mRNA hsa-miR-212 CMPK1 miRanda miRanda
14034 chr1 47838753 47838753 1 + G A COAD 47838766 + 47838746 47838786 41 ATCTTTCGTTCTCTTTTTTGACTGTAATAATGAGGTAATGA ATCTTTCATTCTCTTTTTTGACTGTAATAATGAGGTAATGA < 41bp 1 0.161059255905866 1 0.937490582466125 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838766 chr1:47838753 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_35130 0 0 1 2 47838751 47838772 mRNA hsa-miR-132 CMPK1 miRanda miRanda
14034 chr11 111431029 111431029 1 + A C COAD 111431023 + 111431003 111431043 41 TCCCGATGACATGTCTTGTGACTATGACAACATGGCTGTGA TCCCGATGACATGTCTTGTGACTATGCCAACATGGCTGTGA < 41bp 1 0.767564709958404 1 0.900016903877258 experiment 0.464870580083192 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 LAYN ENSG00000204381 CDS Human protein_coding chr11:111431023 chr11:111431029 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_35177 0 0 1 1 111431009 111431032 mRNA hsa-miR-153 LAYN miRanda miRanda
14034 chr4 178274763 178274763 1 + A C COAD 178274743 + 178274723 178274763 41 AGAAGACAACAAACGATATAACTCAACCATCCAGCAAAGTA AGAAGACAACAAACGATATAACTCAACCATCCAGCAAAGTC < 41bp 1 0.381066091252375 1 0.8531893491745 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 41 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274743 chr4:178274763 synonymous SNV . 0 hm6A_associated_SNPs_35213 0 0 1 3 178274756 178274777 mRNA hsa-miR-125a-3p NEIL3 miRanda miRanda
14034 chr4 178274763 178274763 1 + A C COAD 178274743 + 178274723 178274763 41 AGAAGACAACAAACGATATAACTCAACCATCCAGCAAAGTA AGAAGACAACAAACGATATAACTCAACCATCCAGCAAAGTC < 41bp 1 0.381066091252375 1 0.8531893491745 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 41 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274743 chr4:178274763 synonymous SNV . 0 hm6A_associated_SNPs_35213 0 0 1 3 178274751 178274772 mRNA hsa-miR-190 NEIL3 miRanda miRanda
14034 chr4 178274763 178274763 1 + A C COAD 178274743 + 178274723 178274763 41 AGAAGACAACAAACGATATAACTCAACCATCCAGCAAAGTA AGAAGACAACAAACGATATAACTCAACCATCCAGCAAAGTC < 41bp 1 0.381066091252375 1 0.8531893491745 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 41 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274743 chr4:178274763 synonymous SNV . 0 hm6A_associated_SNPs_35213 0 0 1 3 178274753 178274772 mRNA hsa-miR-190b NEIL3 miRanda miRanda
14034 chr18 48575159 48575159 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGTATGTGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.603984893257976 1 0.640814304351807 experiment 0.792030213484049 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575159 nonsynonymous SNV 0.887 4 hm6A_associated_SNPs_35268 0 0 1 6 48575158 48575178 mRNA hsa-miR-23a SMAD4 miRanda miRanda
14034 chr18 48575159 48575159 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGTATGTGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.603984893257976 1 0.640814304351807 experiment 0.792030213484049 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575159 nonsynonymous SNV 0.887 4 hm6A_associated_SNPs_35268 0 0 1 6 48575149 48575169 mRNA hsa-miR-224 SMAD4 miRanda miRanda
14034 chr18 48575159 48575159 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGTATGTGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.603984893257976 1 0.640814304351807 experiment 0.792030213484049 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575159 nonsynonymous SNV 0.887 4 hm6A_associated_SNPs_35268 0 0 1 6 48575139 48575159 mRNA hsa-miR-200b SMAD4 miRanda miRanda
14034 chr18 48575159 48575159 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGTATGTGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.603984893257976 1 0.640814304351807 experiment 0.792030213484049 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575159 nonsynonymous SNV 0.887 4 hm6A_associated_SNPs_35268 0 0 1 6 48575158 48575178 mRNA hsa-miR-23b SMAD4 miRanda miRanda
14034 chr18 48575159 48575159 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGTATGTGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.603984893257976 1 0.640814304351807 experiment 0.792030213484049 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575159 nonsynonymous SNV 0.887 4 hm6A_associated_SNPs_35268 0 0 1 6 48575138 48575159 mRNA hsa-miR-200c SMAD4 miRanda miRanda
14034 chr18 48575159 48575159 1 + C T COAD 48575165 + 48575145 48575185 41 ATATTGTCAGTATGCGTTTGACTTAAAATGTGATAGTGTCT ATATTGTCAGTATGTGTTTGACTTAAAATGTGATAGTGTCT < 41bp 1 0.603984893257976 1 0.640814304351807 experiment 0.792030213484049 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575165 chr18:48575159 nonsynonymous SNV 0.887 4 hm6A_associated_SNPs_35268 0 0 1 6 48575137 48575159 mRNA hsa-miR-429 SMAD4 miRanda miRanda
14034 chr1 203276500 203276500 1 + C T COAD 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGTAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.62407195559275 1 0.994849860668182 experiment 0.751856088814501 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276500 synonymous SNV . 0 hm6A_associated_SNPs_35306 0 0 1 6 203276500 203276518 mRNA hsa-miR-15a BTG2 miRanda miRanda
14034 chr1 203276500 203276500 1 + C T COAD 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGTAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.62407195559275 1 0.994849860668182 experiment 0.751856088814501 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276500 synonymous SNV . 0 hm6A_associated_SNPs_35306 0 0 1 6 203276497 203276518 mRNA hsa-miR-16 BTG2 miRanda miRanda
14034 chr1 203276500 203276500 1 + C T COAD 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGTAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.62407195559275 1 0.994849860668182 experiment 0.751856088814501 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276500 synonymous SNV . 0 hm6A_associated_SNPs_35306 0 0 1 6 203276500 203276518 mRNA hsa-miR-15b BTG2 miRanda miRanda
14034 chr1 203276500 203276500 1 + C T COAD 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGTAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.62407195559275 1 0.994849860668182 experiment 0.751856088814501 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276500 synonymous SNV . 0 hm6A_associated_SNPs_35306 0 0 1 6 203276477 203276500 mRNA hsa-miR-125a-3p BTG2 miRanda miRanda
14034 chr1 203276500 203276500 1 + C T COAD 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGTAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.62407195559275 1 0.994849860668182 experiment 0.751856088814501 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276500 synonymous SNV . 0 hm6A_associated_SNPs_35306 0 0 1 6 203276498 203276518 mRNA hsa-miR-195 BTG2 miRanda miRanda
14034 chr1 203276500 203276500 1 + C T COAD 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGTAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.62407195559275 1 0.994849860668182 experiment 0.751856088814501 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 16 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276500 synonymous SNV . 0 hm6A_associated_SNPs_35306 0 0 1 6 203276498 203276518 mRNA hsa-miR-424 BTG2 miRanda miRanda
14034 chr3 148889989 148889989 1 + C T COAD 148889997 + 148889977 148890017 41 CTCTATTGCAGTCGAAAGAAACCATTGACTTAAAGGTATCA CTCTATTGCAGTTGAAAGAAACCATTGACTTAAAGGTATCA < 41bp 1 0.478602180221179 1 0.469902873039246 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 13 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148889997 chr3:148889989 stopgain 0.999 0 hm6A_associated_SNPs_35325 0 0 1 1 148889987 148890008 mRNA hsa-miR-224 HPS3 miRanda miRanda
14034 chr3 148889989 148889989 1 + C T COAD 148890004 + 148889984 148890024 41 GCAGTCGAAAGAAACCATTGACTTAAAGGTATCATTTGAAA GCAGTTGAAAGAAACCATTGACTTAAAGGTATCATTTGAAA < 41bp 1 0.740223548352195 1 0.84072881937027 experiment 0.519552903295611 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148890004 chr3:148889989 stopgain 0.999 0 hm6A_associated_SNPs_35326 0 0 1 1 148889987 148890008 mRNA hsa-miR-224 HPS3 miRanda miRanda
14034 chr7 2418375 2418375 1 + C T COAD 2418365 + 2418345 2418385 41 AAATACTCTAAGATCTTTGAACAGAAGGATCGTTTGAGTCA AAATACTCTAAGATCTTTGAACAGAAGGATTGTTTGAGTCA < 41bp 1 0.79210763247098 1 0.564451515674591 experiment 0.415784735058039 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 31 EIF3B ENSG00000106263 CDS Human protein_coding chr7:2418365 chr7:2418375 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_35371 0 0 1 1 2418364 2418383 mRNA hsa-miR-371-5p EIF3B miRanda miRanda
14034 chr20 62701647 62701647 1 + G T COAD 62701634 + 62701614 62701654 41 CATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA CATCTTCCGGGACGTTGGAAACACAGACATGAATTATAAGA < 41bp 1 0.442578046708919 1 0.974814534187317 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 34 TCEA2 ENSG00000171703 CDS Human protein_coding chr20:62701634 chr20:62701647 nonsynonymous SNV 0.865 3 hm6A_associated_SNPs_35393 0 0 0 1 62701627 62701649 mRNA hsa-miR-205 TCEA2 miRanda miRanda
14034 chr11 13393796 13393796 1 + G A COAD 13393803 + 13393783 13393823 41 GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCA GGATGAAGACAACAAACCAGACAATGAGGGGTGTAACCTCA < 41bp 1 0.663497042860654 1 0.966479182243347 experiment 0.673005914278692 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13393803 chr11:13393796 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_35406 0 0 0 1 13393777 13393797 mRNA hsa-miR-187 ARNTL miRanda miRanda
14034 chr15 75632089 75632089 1 + C T COAD 75632076 + 75632056 75632096 41 AGGTGTGGGCTGGCGGGTGGACTACACCCTGAGCTCCAGCC AGGTGTGGGCTGGCGGGTGGACTACACCCTGAGTTCCAGCC < 41bp 1 0.625629772682376 1 0.483729213476181 experiment 0.748740454635249 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 COMMD4 ENSG00000140365 CDS Human protein_coding chr15:75632076 chr15:75632089 synonymous SNV . 0 hm6A_associated_SNPs_35437 0 0 1 2 75632079 75632102 mRNA hsa-miR-214 COMMD4 miRanda miRanda
14034 chr15 75632089 75632089 1 + C T COAD 75632076 + 75632056 75632096 41 AGGTGTGGGCTGGCGGGTGGACTACACCCTGAGCTCCAGCC AGGTGTGGGCTGGCGGGTGGACTACACCCTGAGTTCCAGCC < 41bp 1 0.625629772682376 1 0.483729213476181 experiment 0.748740454635249 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 COMMD4 ENSG00000140365 CDS Human protein_coding chr15:75632076 chr15:75632089 synonymous SNV . 0 hm6A_associated_SNPs_35437 0 0 1 2 75632073 75632095 mRNA hsa-miR-422a COMMD4 miRanda miRanda
14034 chr3 158537507 158537507 1 + G T COAD 158537523 + 158537503 158537543 41 GAGAGAATCCTTCATAAAGAACAAGGAAAAACAGGTAAGTC GAGATAATCCTTCATAAAGAACAAGGAAAAACAGGTAAGTC < 41bp 1 0.644803049871582 1 0.843215644359589 experiment 0.710393900256836 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 5 MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158537523 chr3:158537507 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_35454 0 0 1 1 158537491 158537513 mRNA hsa-miR-876-5p MFSD1 miRanda miRanda
14034 chr19 9453581 9453581 1 + G T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGATAACTCACACTGGTGAACGGCCC < 41bp 1 0.21457066955566 1 0.948281764984131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453581 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_35461 0 0 1 5 9453578 9453597 mRNA hsa-miR-27a ZNF559 miRanda miRanda
14034 chr19 9453581 9453581 1 + G T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGATAACTCACACTGGTGAACGGCCC < 41bp 1 0.21457066955566 1 0.948281764984131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453581 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_35461 0 0 1 5 9453573 9453594 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453581 9453581 1 + G T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGATAACTCACACTGGTGAACGGCCC < 41bp 1 0.21457066955566 1 0.948281764984131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453581 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_35461 0 0 1 5 9453571 9453594 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453581 9453581 1 + G T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGATAACTCACACTGGTGAACGGCCC < 41bp 1 0.21457066955566 1 0.948281764984131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453581 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_35461 0 0 1 5 9453578 9453597 mRNA hsa-miR-27b ZNF559 miRanda miRanda
14034 chr19 9453581 9453581 1 + G T COAD 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGATAACTCACACTGGTGAACGGCCC < 41bp 1 0.21457066955566 1 0.948281764984131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453581 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_35461 0 0 1 5 9453572 9453593 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr2 30381548 30381548 1 + C T COAD 30381567 + 30381547 30381587 41 TCGAGATGTGAGCTGCAAAAACTGCAATAGCAAACTGGGAT TTGAGATGTGAGCTGCAAAAACTGCAATAGCAAACTGGGAT < 41bp 1 0.754963885541037 1 0.826477289199829 experiment 0.490072228917925 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 YPEL5 ENSG00000119801 CDS Human protein_coding chr2:30381567 chr2:30381548 stopgain 1.000 1 hm6A_associated_SNPs_35532 0 0 1 1 30381547 30381568 mRNA hsa-miR-129-5p YPEL5 miRanda miRanda
14034 chr3 56653471 56653471 1 + C T COAD 56653474 + 56653454 56653494 41 ATTTTATTCCGTATGTTCGAACAAATGAGATCTATTACCTT ATTTTATTCCGTATGTTTGAACAAATGAGATCTATTACCTT < 41bp 1 0.647043207214877 1 0.0362788140773773 experiment 0.705913585570247 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56653474 chr3:56653471 stopgain 0.993 1 hm6A_associated_SNPs_35554 0 0 1 1 56653457 56653478 mRNA hsa-miR-375 CCDC66 miRanda miRanda
14034 chr11 94802096 94802096 1 + C A COAD 94802113 + 94802093 94802133 41 GATCATATCAACATGTATGAACTTAAAATATGGAGAATGTT GATAATATCAACATGTATGAACTTAAAATATGGAGAATGTT < 41bp 1 0.455934960529004 1 0.929084062576294 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94802113 chr11:94802096 . . 0 hm6A_associated_SNPs_35570 0 0 1 1 94802075 94802097 mRNA hsa-miR-383 SFRS2B miRanda miRanda
14034 chr20 18462299 18462299 1 + A C COAD 18462282 + 18462262 18462302 41 GGTAGAGTTATCCATGGAAGACATTGAAACCATCCTGAATA GGTAGAGTTATCCATGGAAGACATTGAAACCATCCTGCATA < 41bp 1 0.670111441459678 1 0.134431451559067 experiment 0.659777117080643 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 38 POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462282 chr20:18462299 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_35602 0 0 1 2 18462285 18462309 mRNA hsa-miR-122 POLR3F miRanda miRanda
14034 chr20 18462299 18462299 1 + A C COAD 18462282 + 18462262 18462302 41 GGTAGAGTTATCCATGGAAGACATTGAAACCATCCTGAATA GGTAGAGTTATCCATGGAAGACATTGAAACCATCCTGCATA < 41bp 1 0.670111441459678 1 0.134431451559067 experiment 0.659777117080643 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 38 POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462282 chr20:18462299 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_35602 0 0 1 2 18462288 18462308 mRNA hsa-miR-202 POLR3F miRanda miRanda
14034 chr1 70890067 70890067 1 + G A COAD 70890074 + 70890054 70890094 41 CATTATTTTGGTCGTGGATAACACTTTTATGTCACCATATT CATTATTTTGGTCATGGATAACACTTTTATGTCACCATATT < 41bp 1 0.518123282185894 1 0.00119376182556152 experiment 0.963753435628212 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 CTH ENSG00000116761 CDS Human protein_coding chr1:70890074 chr1:70890067 nonsynonymous SNV 0.996 5 hm6A_associated_SNPs_35661 0 0 1 1 70890057 70890079 mRNA hsa-miR-154 CTH miRanda miRanda
14034 chr2 71653752 71653752 1 + A G COAD 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAGAAAAAGGGGGAAACTTCCACTCCTCGTGGTGTT < 41bp 1 0.648708459180772 1 0.986327409744263 experiment 0.702583081638457 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653752 nonsynonymous SNV 0.856 0 hm6A_associated_SNPs_35675 0 0 1 2 71653731 71653752 mRNA hsa-miR-204 ZNF638 miRanda miRanda
14034 chr2 71653752 71653752 1 + A G COAD 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAGAAAAAGGGGGAAACTTCCACTCCTCGTGGTGTT < 41bp 1 0.648708459180772 1 0.986327409744263 experiment 0.702583081638457 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653752 nonsynonymous SNV 0.856 0 hm6A_associated_SNPs_35675 0 0 1 2 71653731 71653752 mRNA hsa-miR-211 ZNF638 miRanda miRanda
14034 chr15 25342554 25342554 1 + A G COAD 25342560 + 25342540 25342580 41 GTGTATCATGAAAAAGTCTGACATCAAAACCTCAAAATGTG GTGTATCATGAAAAGGTCTGACATCAAAACCTCAAAATGTG < 41bp 1 0.0702294048240165 1 0.0749872624874115 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 15 SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25342560 chr15:25342554 . . 0 hm6A_associated_SNPs_35679 0 0 1 1 25342545 25342567 mRNA hsa-miR-599 SNRPN miRanda miRanda
14034 chr8 110567089 110567089 1 + G T COAD 110567073 + 110567053 110567093 41 TTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACAC TTTGGAACAACTGGAACCTGACTATTTTAAGGACATTACAC < 41bp 1 0.493952951709957 1 0.742654800415039 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110567073 chr8:110567089 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_35720 0 0 1 2 110567088 110567107 mRNA hsa-miR-384 EBAG9 miRanda miRanda
14034 chr8 110567089 110567089 1 + G T COAD 110567073 + 110567053 110567093 41 TTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACAC TTTGGAACAACTGGAACCTGACTATTTTAAGGACATTACAC < 41bp 1 0.493952951709957 1 0.742654800415039 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110567073 chr8:110567089 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_35720 0 0 1 2 110567076 110567096 mRNA hsa-miR-599 EBAG9 miRanda miRanda
14034 chr11 46749672 46749672 1 + G T COAD 46749656 + 46749636 46749676 41 CCTCCTGTACCCGCCCTGGGACAAGAACTTCACCGAGAATG CCTCCTGTACCCGCCCTGGGACAAGAACTTCACCGATAATG < 41bp 1 0.546514149010742 1 0.909943103790283 experiment 0.906971701978516 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 37 F2 ENSG00000180210 CDS Human protein_coding chr11:46749656 chr11:46749672 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_35767 0 0 1 1 46749669 46749693 mRNA hsa-miR-183 F2 miRanda miRanda
14034 chr8 21827048 21827048 1 + A G COAD 21827052 + 21827032 21827072 41 CAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAAC CAAGCTTGTATCACGCGCAAACAACCCCCTACCATTGGAAC < 41bp 1 0.784627764868174 1 0.32274979352951 experiment 0.430744470263652 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 17 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827052 chr8:21827048 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_35820 0 0 1 2 21827032 21827051 mRNA hsa-miR-210 XPO7 miRanda miRanda
14034 chr8 21827048 21827048 1 + A G COAD 21827052 + 21827032 21827072 41 CAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAAC CAAGCTTGTATCACGCGCAAACAACCCCCTACCATTGGAAC < 41bp 1 0.784627764868174 1 0.32274979352951 experiment 0.430744470263652 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 17 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827052 chr8:21827048 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_35820 0 0 1 2 21827039 21827060 mRNA hsa-miR-296-3p XPO7 miRanda miRanda
14034 chr1 3800179 3800179 1 + G T COAD 3800188 + 3800168 3800208 41 TTTACCTCAGAGAACCTAAAACTAGTGCACATTGTCTGCCA TTTACCTCAGATAACCTAAAACTAGTGCACATTGTCTGCCA < 41bp 1 0.7689700151244 1 0.959497570991516 experiment 0.462059969751199 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 DFFB ENSG00000169598 CDS Human protein_coding chr1:3800188 chr1:3800179 nonsynonymous SNV 0.196 0 hm6A_associated_SNPs_35826 0 0 1 2 3800176 3800200 mRNA hsa-miR-25 DFFB miRanda miRanda
14034 chr1 3800179 3800179 1 + G T COAD 3800188 + 3800168 3800208 41 TTTACCTCAGAGAACCTAAAACTAGTGCACATTGTCTGCCA TTTACCTCAGATAACCTAAAACTAGTGCACATTGTCTGCCA < 41bp 1 0.7689700151244 1 0.959497570991516 experiment 0.462059969751199 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 DFFB ENSG00000169598 CDS Human protein_coding chr1:3800188 chr1:3800179 nonsynonymous SNV 0.196 0 hm6A_associated_SNPs_35826 0 0 1 2 3800178 3800200 mRNA hsa-miR-183 DFFB miRanda miRanda
14034 chr12 28515416 28515416 1 + G A COAD 28515396 + 28515376 28515416 41 ACATAAACAAGAATTGGAAGACATGAGGAAAGCTGGTCACG ACATAAACAAGAATTGGAAGACATGAGGAAAGCTGGTCACA < 41bp 1 0.385253572029304 1 0.170589178800583 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28515396 chr12:28515416 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_35866 0 0 1 1 28515405 28515432 mRNA hsa-miR-155 CCDC91 miRanda miRanda
14034 chrX 13762615 13762615 1 + C T COAD 13762608 + 13762588 13762628 41 GTTGTAATATGGAAACTCAGACAAGTTCGACATTTAACAGA GTTGTAATATGGAAACTCAGACAAGTTTGACATTTAACAGA < 41bp 1 0.530110970735328 1 0.013524055480957 experiment 0.939778058529345 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 OFD1 ENSG00000046651 CDS Human protein_coding chrX:13762608 chrX:13762615 nonsynonymous SNV 0.002 1 hm6A_associated_SNPs_35880 0 0 1 1 13762615 13762633 mRNA hsa-miR-216b OFD1 miRanda miRanda
14034 chr2 183605099 183605099 1 + C T COAD 183605105 + 183605085 183605125 41 TTTTGAACTACTTTCGGCAAACACACTAGAGGTAATGTTTT TTTTGAACTACTTTTGGCAAACACACTAGAGGTAATGTTTT < 41bp 1 0.590328608522141 1 0.63596785068512 experiment 0.819342782955718 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 15 DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183605105 chr2:183605099 nonsynonymous SNV 0.978 1 hm6A_associated_SNPs_35891 0 0 1 1 183605082 183605106 mRNA hsa-miR-450a DNAJC10 miRanda miRanda
14034 chr19 21299916 21299916 1 + G A COAD 21299896 + 21299876 21299916 41 ACAAGACATACTGGAGAGAAACCTTTCAAATGTAAAAAATG ACAAGACATACTGGAGAGAAACCTTTCAAATGTAAAAAATA < 41bp 1 0.414556015681474 1 0.817730605602264 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 41 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299896 chr19:21299916 nonsynonymous SNV 0.019 2 hm6A_associated_SNPs_35963 0 0 1 2 21299900 21299920 mRNA hsa-miR-23a ZNF714 miRanda miRanda
14034 chr19 21299916 21299916 1 + G A COAD 21299896 + 21299876 21299916 41 ACAAGACATACTGGAGAGAAACCTTTCAAATGTAAAAAATG ACAAGACATACTGGAGAGAAACCTTTCAAATGTAAAAAATA < 41bp 1 0.414556015681474 1 0.817730605602264 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 41 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299896 chr19:21299916 nonsynonymous SNV 0.019 2 hm6A_associated_SNPs_35963 0 0 1 2 21299900 21299920 mRNA hsa-miR-23b ZNF714 miRanda miRanda
14034 chr1 109336219 109336219 1 + C A COAD 109336204 + 109336184 109336224 41 AAATGTTTGATTTTTCCTAGACATCACTTAGTGCTCTTACC AAATGTTTGATTTTTCCTAGACATCACTTAGTGCTATTACC < 41bp 1 0.555908761098752 1 0.00677460432052612 experiment 0.888182477802496 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109336204 chr1:109336219 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_35974 0 0 1 1 109336204 109336222 mRNA hsa-miR-124 STXBP3 miRanda miRanda
14034 chrX 149912833 149912833 1 + C T COAD 149912852 + 149912832 149912872 41 GCGAGTGGGCCATGGTAATGACAACCATGCGGATGCTGACC GTGAGTGGGCCATGGTAATGACAACCATGCGGATGCTGACC < 41bp 1 0.688834841983075 1 0.226285994052887 experiment 0.62233031603385 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149912852 chrX:149912833 stopgain 0.988 1 hm6A_associated_SNPs_36064 0 0 1 3 149912833 149912833 mRNA hsa-miR-148a MTMR1 miRanda miRanda
14034 chrX 149912833 149912833 1 + C T COAD 149912852 + 149912832 149912872 41 GCGAGTGGGCCATGGTAATGACAACCATGCGGATGCTGACC GTGAGTGGGCCATGGTAATGACAACCATGCGGATGCTGACC < 41bp 1 0.688834841983075 1 0.226285994052887 experiment 0.62233031603385 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149912852 chrX:149912833 stopgain 0.988 1 hm6A_associated_SNPs_36064 0 0 1 3 149912833 149912833 mRNA hsa-miR-152 MTMR1 miRanda miRanda
14034 chrX 149912833 149912833 1 + C T COAD 149912852 + 149912832 149912872 41 GCGAGTGGGCCATGGTAATGACAACCATGCGGATGCTGACC GTGAGTGGGCCATGGTAATGACAACCATGCGGATGCTGACC < 41bp 1 0.688834841983075 1 0.226285994052887 experiment 0.62233031603385 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149912852 chrX:149912833 stopgain 0.988 1 hm6A_associated_SNPs_36064 0 0 1 3 149912833 149912833 mRNA hsa-miR-148b MTMR1 miRanda miRanda
14034 chr14 80328276 80328276 1 + A T COAD 80328282 + 80328262 80328302 41 CGGCCACAAGAAACAGAAAAACAAGGACAGGGAGTATTACG CGGCCACAAGAAACTGAAAAACAAGGACAGGGAGTATTACG < 41bp 1 0.649762122701744 1 0.999211311340332 experiment 0.700475754596512 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 NRXN3 ENSG00000021645 CDS Human protein_coding chr14:80328282 chr14:80328276 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_36104 0 0 0 1 80328272 80328294 mRNA hsa-miR-339-5p NRXN3 miRanda miRanda
14034 chr2 157425896 157425896 1 + G A COAD 157425886 + 157425866 157425906 41 TCTTTATAGGTGGAAAGTGGACAACTTATCGGTCTATGGCA TCTTTATAGGTGGAAAGTGGACAACTTATCAGTCTATGGCA < 41bp 1 0.430466889231221 1 0.848672270774841 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 GPD2 ENSG00000115159 CDS Human protein_coding chr2:157425886 chr2:157425896 nonsynonymous SNV 0.712 4 hm6A_associated_SNPs_36121 0 0 1 1 157425885 157425907 mRNA hsa-miR-153 GPD2 miRanda miRanda
14034 chr5 118582767 118582767 1 + T C COAD 118582771 + 118582751 118582791 41 CCATTTTTAGAAATATTGGAACTGGAGTGATGCAAATTGAG CCATTTTTAGAAATATCGGAACTGGAGTGATGCAAATTGAG < 41bp 1 0.655832968662075 1 0.853303551673889 experiment 0.68833406267585 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118582771 chr5:118582767 synonymous SNV . 0 hm6A_associated_SNPs_36128 0 0 1 1 118582758 118582777 mRNA hsa-miR-145 DMXL1 miRanda miRanda
14034 chr11 62650386 62650386 1 + G A COAD 62650398 + 62650378 62650418 41 AGGCATCCGTGTCATTCTGGACCTTACTCCCAACTACCGGG AGGCATCCATGTCATTCTGGACCTTACTCCCAACTACCGGG < 41bp 1 0.158431142081372 1 0.198692888021469 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62650398 chr11:62650386 nonsynonymous SNV 0.071 1 hm6A_associated_SNPs_36141 0 0 1 1 62650370 62650393 mRNA hsa-miR-425 SLC3A2 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008775 115008796 mRNA hsa-miR-15a CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008775 115008796 mRNA hsa-miR-16 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008773 115008795 mRNA hsa-miR-103 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008773 115008795 mRNA hsa-miR-107 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008775 115008796 mRNA hsa-miR-15b CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008776 115008796 mRNA hsa-miR-195 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008790 115008809 mRNA hsa-miR-371-5p CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008793 115008814 mRNA hsa-miR-375 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008775 115008796 mRNA hsa-miR-424 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGTGTTTTCT < 41bp 1 0.570827598462995 1 0.76249635219574 experiment 0.858344803074009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36183 0 0 1 10 115008777 115008796 mRNA hsa-miR-497 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008775 115008796 mRNA hsa-miR-15a CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008775 115008796 mRNA hsa-miR-16 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008773 115008795 mRNA hsa-miR-103 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008773 115008795 mRNA hsa-miR-107 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008775 115008796 mRNA hsa-miR-15b CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008776 115008796 mRNA hsa-miR-195 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008790 115008809 mRNA hsa-miR-371-5p CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008793 115008814 mRNA hsa-miR-375 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008775 115008796 mRNA hsa-miR-424 CDC16 miRanda miRanda
14034 chr13 115008794 115008794 1 + C T COAD 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGTGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.797054200260312 1 0.301872551441193 experiment 0.405891599479376 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 5 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008794 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_36184 0 0 1 10 115008777 115008796 mRNA hsa-miR-497 CDC16 miRanda miRanda
14034 chr14 90455387 90455387 1 + G T COAD 90455381 + 90455361 90455401 41 AGTTTAAAGAGAGCATGCTGACACTGGGGAAGGAAAGCAAG AGTTTAAAGAGAGCATGCTGACACTGTGGAAGGAAAGCAAG < 41bp 1 0.586743696294574 1 0.653170228004456 experiment 0.826512607410852 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90455381 chr14:90455387 nonsynonymous SNV 0.568 1 hm6A_associated_SNPs_36197 0 0 1 1 90455384 90455404 mRNA hsa-miR-431 TDP1 miRanda miRanda
14034 chr1 150318576 150318576 1 + C T COAD 150318561 + 150318541 150318581 41 ATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCAC ATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTATTGCAC < 41bp 1 0.795310122075274 1 0.743138790130615 experiment 0.409379755849452 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 36 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150318561 chr1:150318576 synonymous SNV . 0 hm6A_associated_SNPs_36239 0 0 1 1 150318561 150318583 mRNA hsa-miR-210 PRPF3 miRanda miRanda
14034 chr19 18466763 18466763 1 + T C COAD 18466774 + 18466754 18466794 41 AGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCC AGATTCCGGCTGAGTACCAAACAGTCCAGAGACTCATCCCC < 41bp 1 0.669425958179156 1 0.095513254404068 experiment 0.661148083641688 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 PGPEP1 ENSG00000130517 CDS Human protein_coding chr19:18466774 chr19:18466763 nonsynonymous SNV 0.619 4 hm6A_associated_SNPs_36264 0 0 1 2 18466759 18466783 mRNA hsa-miR-378 PGPEP1 miRanda miRanda
14034 chr19 18466763 18466763 1 + T C COAD 18466774 + 18466754 18466794 41 AGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCC AGATTCCGGCTGAGTACCAAACAGTCCAGAGACTCATCCCC < 41bp 1 0.669425958179156 1 0.095513254404068 experiment 0.661148083641688 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 PGPEP1 ENSG00000130517 CDS Human protein_coding chr19:18466774 chr19:18466763 nonsynonymous SNV 0.619 4 hm6A_associated_SNPs_36264 0 0 1 2 18466761 18466783 mRNA hsa-miR-422a PGPEP1 miRanda miRanda
14034 chr19 49517793 49517793 1 + G A COAD 49517794 + 49517774 49517814 41 CATCCCCATAGACCTGCTGGACCGGCTGCTTATCGTCTCCA CATCCCCATAGACCTGCTGAACCGGCTGCTTATCGTCTCCA < 41bp 1 0.397112369330408 1 0.942528426647186 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49517794 chr19:49517793 nonsynonymous SNV 0.991 3 hm6A_associated_SNPs_36318 0 0 1 2 49517772 49517793 mRNA hsa-miR-214 RUVBL2 miRanda miRanda
14034 chr19 49517793 49517793 1 + G A COAD 49517794 + 49517774 49517814 41 CATCCCCATAGACCTGCTGGACCGGCTGCTTATCGTCTCCA CATCCCCATAGACCTGCTGAACCGGCTGCTTATCGTCTCCA < 41bp 1 0.397112369330408 1 0.942528426647186 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49517794 chr19:49517793 nonsynonymous SNV 0.991 3 hm6A_associated_SNPs_36318 0 0 1 2 49517792 49517814 mRNA hsa-miR-185 RUVBL2 miRanda miRanda
14034 chr17 62529304 62529304 1 + A G COAD 62529299 + 62529279 62529319 41 CAAGAAAGAATATGAACATAACAAGAGACTGGTATGTCAAG CAAGAAAGAATATGAACATAACAAGGGACTGGTATGTCAAG < 41bp 1 0.61590996038939 1 0.801404654979706 experiment 0.76818007922122 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 26 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62529299 chr17:62529304 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_36324 0 0 1 1 62529293 62529309 mRNA hsa-miR-431 CCDC45 miRanda miRanda
14034 chr1 161197743 161197743 1 + C T COAD 161197729 + 161197709 161197749 41 TGGCGAGTATCGGGGAGATGACTACACAGCCACTCTGACCC TGGCGAGTATCGGGGAGATGACTACACAGCCACTTTGACCC < 41bp 1 0.302983807790506 1 0.404861688613892 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161197729 chr1:161197743 synonymous SNV . 0 hm6A_associated_SNPs_36338 0 0 1 2 161197737 161197756 mRNA hsa-miR-384 TOMM40L miRanda miRanda
14034 chr1 161197743 161197743 1 + C T COAD 161197729 + 161197709 161197749 41 TGGCGAGTATCGGGGAGATGACTACACAGCCACTCTGACCC TGGCGAGTATCGGGGAGATGACTACACAGCCACTTTGACCC < 41bp 1 0.302983807790506 1 0.404861688613892 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161197729 chr1:161197743 synonymous SNV . 0 hm6A_associated_SNPs_36338 0 0 1 2 161197741 161197760 mRNA hsa-miR-876-5p TOMM40L miRanda miRanda
14034 chr1 161197743 161197743 1 + C T COAD 161197746 + 161197726 161197766 41 ATGACTACACAGCCACTCTGACCCTAGGAAATCCTGACCTG ATGACTACACAGCCACTTTGACCCTAGGAAATCCTGACCTG < 41bp 1 0.147668289635334 1 0.664933085441589 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161197746 chr1:161197743 synonymous SNV . 0 hm6A_associated_SNPs_36339 0 0 1 2 161197737 161197756 mRNA hsa-miR-384 TOMM40L miRanda miRanda
14034 chr1 161197743 161197743 1 + C T COAD 161197746 + 161197726 161197766 41 ATGACTACACAGCCACTCTGACCCTAGGAAATCCTGACCTG ATGACTACACAGCCACTTTGACCCTAGGAAATCCTGACCTG < 41bp 1 0.147668289635334 1 0.664933085441589 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161197746 chr1:161197743 synonymous SNV . 0 hm6A_associated_SNPs_36339 0 0 1 2 161197741 161197760 mRNA hsa-miR-876-5p TOMM40L miRanda miRanda
14034 chr5 126154715 126154715 1 + G A COAD 126154696 + 126154676 126154716 41 CTCTCGTCGCATGCTGACAGACAAAGAGAGAGAGATGGCGG CTCTCGTCGCATGCTGACAGACAAAGAGAGAGAGATGGCAG < 41bp 1 0.785410132285337 1 0.87344229221344 experiment 0.429179735429327 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126154696 chr5:126154715 synonymous SNV . 0 hm6A_associated_SNPs_36362 0 0 1 1 126154705 126154727 mRNA hsa-miR-211 LMNB1 miRanda miRanda
14034 chr17 10608524 10608524 1 + T C DLBC 10608516 + 10608496 10608536 41 GCATCCAAAAAGTCCCTAGAACTTGTTATGGACATGTTCAA GCATCCAAAAAGTCCCTAGAACTTGTTACGGACATGTTCAA < 41bp 1 0.693093853361444 1 0.986996829509735 experiment 0.613812293277111 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 29 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608516 chr17:10608524 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_36387 0 0 0 2 10608514 10608536 mRNA hsa-miR-203 C17orf48 miRanda miRanda
14034 chr17 10608524 10608524 1 + T C DLBC 10608516 + 10608496 10608536 41 GCATCCAAAAAGTCCCTAGAACTTGTTATGGACATGTTCAA GCATCCAAAAAGTCCCTAGAACTTGTTACGGACATGTTCAA < 41bp 1 0.693093853361444 1 0.986996829509735 experiment 0.613812293277111 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 29 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608516 chr17:10608524 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_36387 0 0 0 2 10608512 10608534 mRNA hsa-miR-132 C17orf48 miRanda miRanda
14034 chr3 10094085 10094085 1 + T G DLBC 10094093 + 10094073 10094113 41 CATTTTAGATTATCTGGATAACATATCCCCTCAGCAAATAC CATTTTAGATTAGCTGGATAACATATCCCCTCAGCAAATAC < 41bp 1 0.543941948394466 1 0.000114738941192627 experiment 0.912116103211067 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10094093 chr3:10094085 stopgain 0.991 1 hm6A_associated_SNPs_36415 0 0 1 2 10094079 10094100 mRNA hsa-miR-190 FANCD2 miRanda miRanda
14034 chr3 10094085 10094085 1 + T G DLBC 10094093 + 10094073 10094113 41 CATTTTAGATTATCTGGATAACATATCCCCTCAGCAAATAC CATTTTAGATTAGCTGGATAACATATCCCCTCAGCAAATAC < 41bp 1 0.543941948394466 1 0.000114738941192627 experiment 0.912116103211067 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10094093 chr3:10094085 stopgain 0.991 1 hm6A_associated_SNPs_36415 0 0 1 2 10094076 10094100 mRNA hsa-miR-190b FANCD2 miRanda miRanda
14034 chr8 22052356 22052356 1 + G A DLBC 22052343 + 22052323 22052363 41 TGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC TGGCTATGAGAAGCCTGATGACATCAAGAGCACATCCAGCC < 41bp 1 0.562945700887497 1 0.969754993915558 experiment 0.874108598225005 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 BMP1 ENSG00000168487 CDS Human protein_coding chr8:22052343 chr8:22052356 synonymous SNV . 0 hm6A_associated_SNPs_36460 0 0 0 1 22052333 22052357 mRNA hsa-miR-187 BMP1 miRanda miRanda
14034 chr9 731215 731215 1 + A G DLBC 731212 + 731192 731232 41 CATGAAGAAGAAAGATGGTAACAAAGATTCAAATGGCGCAA CATGAAGAAGAAAGATGGTAACAGAGATTCAAATGGCGCAA < 41bp 1 0.583931243041841 1 0.884874701499939 experiment 0.832137513916317 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 24 KANK1 ENSG00000107104 CDS Human protein_coding chr9:731212 chr9:731215 nonsynonymous SNV 0.903 0 hm6A_associated_SNPs_36469 0 0 0 1 731213 731236 mRNA hsa-miR-129-5p KANK1 miRanda miRanda
14034 chr8 42940407 42940407 1 + A T DLBC 42940425 + 42940405 42940445 41 CCAACAAATGTACAGCAATAACACCATCCAGAAGAACTTGA CCTACAAATGTACAGCAATAACACCATCCAGAAGAACTTGA < 41bp 1 0.749488854204572 1 0.910579442977905 experiment 0.501022291590856 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 3 FNTA ENSG00000168522 CDS Human protein_coding chr8:42940425 chr8:42940407 synonymous SNV . 0 hm6A_associated_SNPs_36470 0 0 0 1 42940403 42940425 mRNA hsa-miR-137 FNTA miRanda miRanda
14034 chr2 55462711 55462711 1 + T C DLBC 55462698 + 55462678 55462718 41 CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA CTGACTTACTGTTTCAACAAACCAGAAGACAAGCAACTGTA < 41bp 1 0.728167256527624 1 0.579134941101074 experiment 0.543665486944751 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462698 chr2:55462711 stoploss 0.965 0 hm6A_associated_SNPs_36488 0 0 1 1 55462700 55462720 mRNA hsa-miR-139-5p RPS27A miRanda miRanda
14034 chr2 234363499 234363499 1 + T A DLBC 234363480 + 234363460 234363500 41 GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGATG GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGAAG < 41bp 1 0.303340299877485 1 0.993180334568024 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363480 chr2:234363499 nonsynonymous SNV 0.616 1 hm6A_associated_SNPs_36503 0 0 1 2 234363491 234363512 mRNA hsa-miR-330-5p DGKD miRanda miRanda
14034 chr2 234363499 234363499 1 + T A DLBC 234363480 + 234363460 234363500 41 GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGATG GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGAAG < 41bp 1 0.303340299877485 1 0.993180334568024 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363480 chr2:234363499 nonsynonymous SNV 0.616 1 hm6A_associated_SNPs_36503 0 0 1 2 234363494 234363512 mRNA hsa-miR-326 DGKD miRanda miRanda
14034 chr2 234363499 234363499 1 + T A DLBC 234363486 + 234363466 234363506 41 GAAGATATCCCTGGACTTTAACAACAAGCGCGATGAGCACC GAAGATATCCCTGGACTTTAACAACAAGCGCGAAGAGCACC < 41bp 1 0.520140863209239 1 0.948952972888947 experiment 0.959718273581523 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363486 chr2:234363499 nonsynonymous SNV 0.616 1 hm6A_associated_SNPs_36504 0 0 1 2 234363491 234363512 mRNA hsa-miR-330-5p DGKD miRanda miRanda
14034 chr2 234363499 234363499 1 + T A DLBC 234363486 + 234363466 234363506 41 GAAGATATCCCTGGACTTTAACAACAAGCGCGATGAGCACC GAAGATATCCCTGGACTTTAACAACAAGCGCGAAGAGCACC < 41bp 1 0.520140863209239 1 0.948952972888947 experiment 0.959718273581523 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363486 chr2:234363499 nonsynonymous SNV 0.616 1 hm6A_associated_SNPs_36504 0 0 1 2 234363494 234363512 mRNA hsa-miR-326 DGKD miRanda miRanda
14034 chr12 77158055 77158055 1 + C T DLBC 77158039 + 77158019 77158059 41 GCAGCGGGAGGAGGGATTTAACACCAAGATGGCGGACGGCC GCAGCGGGAGGAGGGATTTAACACCAAGATGGCGGATGGCC < 41bp 1 0.55259780312919 1 0.910863637924194 experiment 0.89480439374162 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 37 ZDHHC17 ENSG00000186908 CDS Human protein_coding chr12:77158039 chr12:77158055 nonsynonymous SNV . 0 hm6A_associated_SNPs_36524 0 0 1 1 77158048 77158074 mRNA hsa-miR-487b ZDHHC17 miRanda miRanda
14034 chr17 58700916 58700916 1 + C T ESCA 58700926 + 58700906 58700946 41 GTCTTCCTAGCACATCAGGGACAACTGCCAGTGTGGTCATC GTCTTCCTAGTACATCAGGGACAACTGCCAGTGTGGTCATC < 41bp 1 0.741943358336888 1 0.753177404403687 experiment 0.516113283326223 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58700926 chr17:58700916 synonymous SNV . 0 hm6A_associated_SNPs_36528 0 0 1 1 58700912 58700935 mRNA hsa-miR-34a PPM1D miRanda miRanda
14034 chr9 136892100 136892100 1 + G T ESCA 136892090 + 136892070 136892110 41 CAAGCTCGAGGTCTCTAGGGACACAGGGCAGTCCAAGTTTT CAAGCTCGAGGTCTCTAGGGACACAGGGCATTCCAAGTTTT < 41bp 1 0.733144970426184 1 0.988240957260132 experiment 0.533710059147632 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136892090 chr9:136892100 . . 0 hm6A_associated_SNPs_36549 0 0 1 2 136892094 136892115 mRNA hsa-miR-19a NCRNA00094 miRanda miRanda
14034 chr9 136892100 136892100 1 + G T ESCA 136892090 + 136892070 136892110 41 CAAGCTCGAGGTCTCTAGGGACACAGGGCAGTCCAAGTTTT CAAGCTCGAGGTCTCTAGGGACACAGGGCATTCCAAGTTTT < 41bp 1 0.733144970426184 1 0.988240957260132 experiment 0.533710059147632 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136892090 chr9:136892100 . . 0 hm6A_associated_SNPs_36549 0 0 1 2 136892093 136892115 mRNA hsa-miR-19b NCRNA00094 miRanda miRanda
14034 chr17 62223488 62223488 1 + G T ESCA 62223477 + 62223457 62223497 41 CCAATTAAAGCACGTGTTAGACTGCTGACGCGGGTGATGCG CCAATTAAAGCACGTGTTAGACTGCTGACGCTGGTGATGCG < 41bp 1 0.519746109672211 1 0.97727382183075 experiment 0.960507780655579 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 32 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223477 chr17:62223488 . . 0 hm6A_associated_SNPs_36552 0 0 1 1 62223483 62223505 mRNA hsa-miR-145 SNORD104 miRanda miRanda
14034 chr17 62223488 62223488 1 + G T ESCA 62223499 + 62223479 62223519 41 TGCTGACGCGGGTGATGCGAACTGGAGTCTGAGCCTGCCCG TGCTGACGCTGGTGATGCGAACTGGAGTCTGAGCCTGCCCG < 41bp 1 0.582591146744813 1 0.977283358573914 experiment 0.834817706510373 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 10 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223499 chr17:62223488 . . 0 hm6A_associated_SNPs_36553 0 0 1 1 62223483 62223505 mRNA hsa-miR-145 SNORD104 miRanda miRanda
14034 chr3 184086034 184086034 1 + C T ESCA 184086042 + 184086022 184086062 41 CCTGCATGGATTCGAGGTGGACTCCAGAGTTTATCTCCTGA CCTGCATGGATTTGAGGTGGACTCCAGAGTTTATCTCCTGA < 41bp 1 0.762993590922416 1 0.956807017326355 experiment 0.474012818155167 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 POLR2H ENSG00000163882 CDS Human protein_coding chr3:184086042 chr3:184086034 stopgain 0.997 0 hm6A_associated_SNPs_36555 0 0 1 1 184086031 184086053 mRNA hsa-miR-490-3p POLR2H miRanda miRanda
14034 chr9 139310802 139310802 1 + C T ESCA 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCAGTTTGAGCTGGAGGACCTGAACCTGTGGCCTGACC < 41bp 1 0.620034578532036 1 0.95536607503891 experiment 0.759930842935929 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310802 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_36620 0 0 1 2 139310797 139310817 mRNA hsa-miR-330-5p PMPCA miRanda miRanda
14034 chr9 139310802 139310802 1 + C T ESCA 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCAGTTTGAGCTGGAGGACCTGAACCTGTGGCCTGACC < 41bp 1 0.620034578532036 1 0.95536607503891 experiment 0.759930842935929 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310802 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_36620 0 0 1 2 139310798 139310817 mRNA hsa-miR-326 PMPCA miRanda miRanda
14034 chr9 139310802 139310802 1 + C T ESCA 139310797 + 139310777 139310817 41 GTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC GTTTGAGCTGGAGGACCTGAACCTGTGGCCTGACCCAGAGC < 41bp 1 0.620817167224185 1 0.956221640110016 experiment 0.75836566555163 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310797 chr9:139310802 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_36621 0 0 1 2 139310797 139310817 mRNA hsa-miR-330-5p PMPCA miRanda miRanda
14034 chr9 139310802 139310802 1 + C T ESCA 139310797 + 139310777 139310817 41 GTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC GTTTGAGCTGGAGGACCTGAACCTGTGGCCTGACCCAGAGC < 41bp 1 0.620817167224185 1 0.956221640110016 experiment 0.75836566555163 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310797 chr9:139310802 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_36621 0 0 1 2 139310798 139310817 mRNA hsa-miR-326 PMPCA miRanda miRanda
14034 chr3 49051299 49051299 1 + C T ESCA 49051282 + 49051262 49051302 41 CGCACTCACAGCTGTTTGTAACCATATCTCCTCGGTACGTG CGCACTCACAGCTGTTTGTAACCATATCTCCTCGGTATGTG < 41bp 1 0.7163477895735 1 0.782758593559265 experiment 0.567304420853001 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 WDR6 ENSG00000178252 CDS Human protein_coding chr3:49051282 chr3:49051299 nonsynonymous SNV 0.603 4 hm6A_associated_SNPs_36652 0 0 1 1 49051282 49051301 mRNA hsa-miR-126 WDR6 miRanda miRanda
14034 chr19 49604727 49604727 1 + C T ESCA 49604709 + 49604689 49604729 41 TATGCCTTCATCGAGTACGAACACGAGCGAGACATGCACTG TATGCCTTCATCGAGTACGAACACGAGCGAGACATGCATTG < 41bp 1 0.686941714490979 1 0.901199460029602 experiment 0.626116571018043 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 39 SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49604709 chr19:49604727 synonymous SNV . 0 hm6A_associated_SNPs_36665 0 0 1 1 49604715 49604728 mRNA hsa-miR-138 SNRNP70 miRanda miRanda
14034 chr18 12310963 12310963 1 + C T ESCA 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCAGGGTCGCCCTGGTGGACTTAGAGCCAGGCACCATGG < 41bp 1 0.466488599732645 1 0.868115425109863 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310963 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_36666 0 0 1 2 12310962 12310985 mRNA hsa-miR-24 TUBB6 miRanda miRanda
14034 chr18 12310963 12310963 1 + C T ESCA 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCAGGGTCGCCCTGGTGGACTTAGAGCCAGGCACCATGG < 41bp 1 0.466488599732645 1 0.868115425109863 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310963 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_36666 0 0 1 2 12310956 12310979 mRNA hsa-miR-224 TUBB6 miRanda miRanda
14034 chr1 211486260 211486260 1 + C T ESCA 211486250 + 211486230 211486270 41 CTTCTACTTTAGGGGAGGAGACAAAAAGTGCTTCTAATGTG CTTCTACTTTAGGGGAGGAGACAAAAAGTGTTTCTAATGTG < 41bp 1 0.706642508924061 1 0.958016514778137 experiment 0.586714982151878 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486250 chr1:211486260 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_36671 0 0 1 1 211486255 211486275 mRNA hsa-miR-183 RCOR3 miRanda miRanda
14034 chrX 48755853 48755853 1 + G A ESCA 48755846 + 48755826 48755866 41 GCCAAGAGAGGCATCCTCAAACATCTGGAGCCTGGTGAGAC GCCAAGAGAGGCATCCTCAAACATCTGAAGCCTGGTGAGAC < 41bp 1 0.586165473924243 1 0.0796532034873962 experiment 0.827669052151514 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48755846 chrX:48755853 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_36826 0 0 1 2 48755830 48755854 mRNA hsa-miR-199a-5p PQBP1 miRanda miRanda
14034 chrX 48755853 48755853 1 + G A ESCA 48755846 + 48755826 48755866 41 GCCAAGAGAGGCATCCTCAAACATCTGGAGCCTGGTGAGAC GCCAAGAGAGGCATCCTCAAACATCTGAAGCCTGGTGAGAC < 41bp 1 0.586165473924243 1 0.0796532034873962 experiment 0.827669052151514 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48755846 chrX:48755853 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_36826 0 0 1 2 48755830 48755854 mRNA hsa-miR-199b-5p PQBP1 miRanda miRanda
14034 chr5 35876573 35876573 1 + C G ESCA 35876581 + 35876561 35876601 41 CATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACC CATGTCCAGCTTGTACCAAAACCAGTGAAGTGTAAGAAACC < 41bp 1 0.412622001256129 1 0.380312085151672 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876581 chr5:35876573 nonsynonymous SNV 0.960 3 hm6A_associated_SNPs_36840 0 0 0 3 35876571 35876594 mRNA hsa-miR-181a IL7R miRanda miRanda
14034 chr5 35876573 35876573 1 + C G ESCA 35876581 + 35876561 35876601 41 CATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACC CATGTCCAGCTTGTACCAAAACCAGTGAAGTGTAAGAAACC < 41bp 1 0.412622001256129 1 0.380312085151672 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876581 chr5:35876573 nonsynonymous SNV 0.960 3 hm6A_associated_SNPs_36840 0 0 0 3 35876571 35876594 mRNA hsa-miR-181b IL7R miRanda miRanda
14034 chr5 35876573 35876573 1 + C G ESCA 35876581 + 35876561 35876601 41 CATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACC CATGTCCAGCTTGTACCAAAACCAGTGAAGTGTAAGAAACC < 41bp 1 0.412622001256129 1 0.380312085151672 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876581 chr5:35876573 nonsynonymous SNV 0.960 3 hm6A_associated_SNPs_36840 0 0 0 3 35876571 35876594 mRNA hsa-miR-181d IL7R miRanda miRanda
14034 chr14 80327777 80327777 1 + G A ESCA 80327789 + 80327769 80327809 41 AAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCC AAGTCTCCAAAACTAGTAGGACTACTACCACATCTTTATCC < 41bp 1 0.773139429141399 1 0.988465487957001 experiment 0.453721141717202 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 NRXN3 ENSG00000021645 CDS Human protein_coding chr14:80327789 chr14:80327777 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_36872 0 0 0 1 80327773 80327797 mRNA hsa-miR-142-3p NRXN3 miRanda miRanda
14034 chr11 65267000 65267000 1 + G C ESCA 65266995 + 65266975 65267015 41 AAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAG AAACCGAAGGTGATTAAAAGACCTTCAAATCCATGACGCAG < 41bp 1 0.0255757896794876 1 0.630042552947998 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266995 chr11:65267000 . . 0 hm6A_associated_SNPs_36876 0 0 1 2 65266986 65267007 lncRNA hsa-miR-3167 MALAT1 miRanda starBase2
14034 chr11 65267000 65267000 1 + G C ESCA 65266995 + 65266975 65267015 41 AAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAG AAACCGAAGGTGATTAAAAGACCTTCAAATCCATGACGCAG < 41bp 1 0.0255757896794876 1 0.630042552947998 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266995 chr11:65267000 . . 0 hm6A_associated_SNPs_36876 0 0 1 2 65266982 65267007 lncRNA hsa-miR-876-5p MALAT1 miRanda starBase2
14034 chr5 56545287 56545287 1 + C T ESCA 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTTGTCT < 41bp 1 0.389851930524588 1 0.1413434445858 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545287 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_36932 0 0 1 2 56545282 56545304 mRNA hsa-miR-223 GPBP1 miRanda miRanda
14034 chr5 56545287 56545287 1 + C T ESCA 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTTGTCT < 41bp 1 0.389851930524588 1 0.1413434445858 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545287 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_36932 0 0 1 2 56545270 56545288 mRNA hsa-miR-485-5p GPBP1 miRanda miRanda
14034 chr16 71961715 71961715 1 + A T ESCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACATTGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.773447655829568 1 0.90818977355957 experiment 0.453104688340864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961715 stoploss 0.968 0 hm6A_associated_SNPs_36972 0 0 1 4 71961701 71961721 mRNA hsa-miR-192 KIAA0174 miRanda miRanda
14034 chr16 71961715 71961715 1 + A T ESCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACATTGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.773447655829568 1 0.90818977355957 experiment 0.453104688340864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961715 stoploss 0.968 0 hm6A_associated_SNPs_36972 0 0 1 4 71961703 71961721 mRNA hsa-miR-192 KIAA0174 miRanda miRanda
14034 chr16 71961715 71961715 1 + A T ESCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACATTGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.773447655829568 1 0.90818977355957 experiment 0.453104688340864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961715 stoploss 0.968 0 hm6A_associated_SNPs_36972 0 0 1 4 71961701 71961721 mRNA hsa-miR-215 KIAA0174 miRanda miRanda
14034 chr16 71961715 71961715 1 + A T ESCA 71961726 + 71961706 71961746 41 AGAAAACATAGGTCTCTTAAACCAGGCAACTTTCACGTTTT AGAAAACATTGGTCTCTTAAACCAGGCAACTTTCACGTTTT < 41bp 1 0.773447655829568 1 0.90818977355957 experiment 0.453104688340864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 10 IST1 ENSG00000182149 CDS Human protein_coding chr16:71961726 chr16:71961715 stoploss 0.968 0 hm6A_associated_SNPs_36972 0 0 1 4 71961703 71961721 mRNA hsa-miR-215 KIAA0174 miRanda miRanda
14034 chr7 73107706 73107706 1 + C T ESCA 73107717 + 73107697 73107737 41 CTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAG CTCCGGTGGTATGGTGGTAGACTACCCTAACAGTGCCAAAG < 41bp 1 0.181786128307569 1 0.0668211579322815 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107717 chr7:73107706 synonymous SNV . 0 hm6A_associated_SNPs_37027 0 0 1 1 73107697 73107718 mRNA hsa-miR-197 WBSCR22 miRanda miRanda
14034 chr7 73107706 73107706 1 + C T ESCA 73107726 + 73107706 73107746 41 CATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT TATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGT < 41bp 1 0.517658943787048 1 0.0837817490100861 experiment 0.964682112425904 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 1 BUD23 ENSG00000071462 CDS Human protein_coding chr7:73107726 chr7:73107706 synonymous SNV . 0 hm6A_associated_SNPs_37028 0 0 1 1 73107697 73107718 mRNA hsa-miR-197 WBSCR22 miRanda miRanda
14034 chr1 236972037 236972037 1 + G A ESCA 236972017 + 236971997 236972037 41 ACGTTAGGCCTACCGGATGAACATGTGCTCTGCAGGAGTGG ACGTTAGGCCTACCGGATGAACATGTGCTCTGCAGGAGTGA < 41bp 1 0.330047336974565 1 0.899157166481018 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 MTR ENSG00000116984 CDS Human protein_coding chr1:236972017 chr1:236972037 nonsynonymous SNV 0.936 4 hm6A_associated_SNPs_37032 0 0 1 1 236972020 236972041 mRNA hsa-miR-328 MTR miRanda miRanda
14034 chr1 236972027 236972027 1 + T G ESCA 236972017 + 236971997 236972037 41 ACGTTAGGCCTACCGGATGAACATGTGCTCTGCAGGAGTGG ACGTTAGGCCTACCGGATGAACATGTGCTCGGCAGGAGTGG < 41bp 1 0.354975306470016 1 0.915170192718506 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 MTR ENSG00000116984 CDS Human protein_coding chr1:236972017 chr1:236972027 synonymous SNV . 0 hm6A_associated_SNPs_37055 0 0 1 1 236972020 236972041 mRNA hsa-miR-328 MTR miRanda miRanda
14034 chr1 54670828 54670828 1 + C T ESCA 54670840 + 54670820 54670860 41 CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG CTCACGCCTGTCTCTGGCAGACCACTGAGGAAATCCCCAAG < 41bp 1 0.205118318799854 1 0.908490538597107 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670840 chr1:54670828 nonsynonymous SNV 0.975 1 hm6A_associated_SNPs_37060 0 0 1 1 54670821 54670842 mRNA hsa-miR-346 MRPL37 miRanda miRanda
14034 chr2 66775122 66775122 1 + G T ESCA 66775118 + 66775098 66775138 41 GAAAAAGCAGTTGGCACAAGACACGGGACTCACCATCCTTC GAAAAAGCAGTTGGCACAAGACACTGGACTCACCATCCTTC < 41bp 1 0.336249420672238 1 0.752768158912659 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66775118 chr2:66775122 synonymous SNV . 0 hm6A_associated_SNPs_37066 0 0 0 1 66775101 66775123 mRNA hsa-miR-187 MEIS1 miRanda miRanda
14034 chr11 65267814 65267814 1 + G A ESCA 65267809 + 65267789 65267829 41 ACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTT ACTTAATGTTTTTGCATTGGACTTTAAGTTAAGATTATTTT < 41bp 1 0.11016748690489 1 0.993570148944855 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267809 chr11:65267814 . . 0 hm6A_associated_SNPs_37069 0 0 1 1 65267797 65267818 lncRNA hsa-miR-888-5p MALAT1 miRanda starBase2
14034 chr12 104709577 104709577 1 + T A ESCA 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAAAGTGGGTTGC < 41bp 1 0.668292689877129 1 0.830674409866333 experiment 0.663414620245743 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709577 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_37072 0 0 1 4 104709558 104709580 mRNA hsa-miR-181a TXNRD1 miRanda miRanda
14034 chr12 104709577 104709577 1 + T A ESCA 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAAAGTGGGTTGC < 41bp 1 0.668292689877129 1 0.830674409866333 experiment 0.663414620245743 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709577 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_37072 0 0 1 4 104709558 104709580 mRNA hsa-miR-181b TXNRD1 miRanda miRanda
14034 chr12 104709577 104709577 1 + T A ESCA 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAAAGTGGGTTGC < 41bp 1 0.668292689877129 1 0.830674409866333 experiment 0.663414620245743 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709577 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_37072 0 0 1 4 104709558 104709580 mRNA hsa-miR-181c TXNRD1 miRanda miRanda
14034 chr12 104709577 104709577 1 + T A ESCA 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGTGAAAGTGGGTTGC < 41bp 1 0.668292689877129 1 0.830674409866333 experiment 0.663414620245743 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709577 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_37072 0 0 1 4 104709558 104709580 mRNA hsa-miR-181d TXNRD1 miRanda miRanda
14034 chr16 50261884 50261884 1 + T C ESCA 50261879 + 50261859 50261899 41 GGAAAATGCAAAGCACCCAAACCACTAACACATCCAACAGC GGAAAATGCAAAGCACCCAAACCACCAACACATCCAACAGC < 41bp 1 0.0683162618436034 1 0.15622091293335 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;SETD2 knockdown 26 PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50261879 chr16:50261884 synonymous SNV . 0 hm6A_associated_SNPs_37099 0 0 1 1 50261864 50261885 mRNA hsa-miR-140-5p PAPD5 miRanda miRanda
14034 chr10 94694131 94694131 1 + G A ESCA 94694144 + 94694124 94694164 41 ATACACTGATGAACTTTGGAACATGGCCCTCTCAAAGATAA ATACACTAATGAACTTTGGAACATGGCCCTCTCAAAGATAA < 41bp 1 0.568928220187945 1 0.677375853061676 experiment 0.862143559624111 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94694144 chr10:94694131 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_37155 0 0 1 1 94694117 94694136 mRNA hsa-miR-27b EXOC6 miRanda miRanda
14034 chr10 89487163 89487163 1 + G A ESCA 89487180 + 89487160 89487200 41 CGAGACGCTGAATTCTATGAACACAGAAAAGAGGAACGCTG CGAAACGCTGAATTCTATGAACACAGAAAAGAGGAACGCTG < 41bp 1 0.503392221285999 1 0.0455474853515625 experiment 0.993215557428002 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 4 PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89487180 chr10:89487163 nonsynonymous SNV 0.201 0 hm6A_associated_SNPs_37157 0 0 0 2 89487160 89487180 mRNA hsa-miR-376a PAPSS2 miRanda miRanda
14034 chr10 89487163 89487163 1 + G A ESCA 89487180 + 89487160 89487200 41 CGAGACGCTGAATTCTATGAACACAGAAAAGAGGAACGCTG CGAAACGCTGAATTCTATGAACACAGAAAAGAGGAACGCTG < 41bp 1 0.503392221285999 1 0.0455474853515625 experiment 0.993215557428002 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 4 PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89487180 chr10:89487163 nonsynonymous SNV 0.201 0 hm6A_associated_SNPs_37157 0 0 0 2 89487159 89487180 mRNA hsa-miR-376b PAPSS2 miRanda miRanda
14034 chr17 9745841 9745841 1 + T G ESCA 9745853 + 9745833 9745873 41 GACACTGCTTGGCTCAGGGGACTTGGCAGACGATAGAGAAC GACACTGCGTGGCTCAGGGGACTTGGCAGACGATAGAGAAC < 41bp 1 0.186270390815587 1 0.959588170051575 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 GLP2R ENSG00000065325 CDS Human protein_coding chr17:9745853 chr17:9745841 nonsynonymous SNV 0.978 0 hm6A_associated_SNPs_37162 0 0 0 2 9745832 9745852 mRNA hsa-miR-125b GLP2R miRanda miRanda
14034 chr17 9745841 9745841 1 + T G ESCA 9745853 + 9745833 9745873 41 GACACTGCTTGGCTCAGGGGACTTGGCAGACGATAGAGAAC GACACTGCGTGGCTCAGGGGACTTGGCAGACGATAGAGAAC < 41bp 1 0.186270390815587 1 0.959588170051575 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 GLP2R ENSG00000065325 CDS Human protein_coding chr17:9745853 chr17:9745841 nonsynonymous SNV 0.978 0 hm6A_associated_SNPs_37162 0 0 0 2 9745829 9745852 mRNA hsa-miR-125a-5p GLP2R miRanda miRanda
14034 chr11 65273214 65273214 1 + G C ESCA 65273208 + 65273188 65273228 41 AATTTGCCTGCAAATTGTTAACAGAAGGGTATTAAAACCAC AATTTGCCTGCAAATTGTTAACAGAACGGTATTAAAACCAC < 41bp 1 0.138298344281837 1 0.891136169433594 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273208 chr11:65273214 . . 0 hm6A_associated_SNPs_37166 0 0 1 1 65273214 65273237 lncRNA hsa-miR-374c-3p MALAT1 miRanda starBase2
14034 chr1 63836654 63836654 1 + G T ESCA 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGATAAATGGTACTTG < 41bp 1 0.327763138129069 1 0.96984851360321 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37202 0 0 1 4 63836649 63836668 mRNA hsa-miR-26a ALG6 miRanda miRanda
14034 chr1 63836654 63836654 1 + G T ESCA 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGATAAATGGTACTTG < 41bp 1 0.327763138129069 1 0.96984851360321 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37202 0 0 1 4 63836645 63836668 mRNA hsa-miR-26b ALG6 miRanda miRanda
14034 chr1 63836654 63836654 1 + G T ESCA 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGATAAATGGTACTTG < 41bp 1 0.327763138129069 1 0.96984851360321 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37202 0 0 1 4 63836652 63836675 mRNA hsa-miR-217 ALG6 miRanda miRanda
14034 chr1 63836654 63836654 1 + G T ESCA 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGATAAATGGTACTTG < 41bp 1 0.327763138129069 1 0.96984851360321 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 29 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37202 0 0 1 4 63836650 63836668 mRNA hsa-miR-1297 ALG6 miRanda miRanda
14034 chr1 63836654 63836654 1 + G T ESCA 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGATAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.514508482928608 1 0.95842981338501 experiment 0.970983034142785 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 5 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37203 0 0 1 4 63836649 63836668 mRNA hsa-miR-26a ALG6 miRanda miRanda
14034 chr1 63836654 63836654 1 + G T ESCA 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGATAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.514508482928608 1 0.95842981338501 experiment 0.970983034142785 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 5 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37203 0 0 1 4 63836645 63836668 mRNA hsa-miR-26b ALG6 miRanda miRanda
14034 chr1 63836654 63836654 1 + G T ESCA 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGATAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.514508482928608 1 0.95842981338501 experiment 0.970983034142785 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 5 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37203 0 0 1 4 63836652 63836675 mRNA hsa-miR-217 ALG6 miRanda miRanda
14034 chr1 63836654 63836654 1 + G T ESCA 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGATAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.514508482928608 1 0.95842981338501 experiment 0.970983034142785 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 5 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836654 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_37203 0 0 1 4 63836650 63836668 mRNA hsa-miR-1297 ALG6 miRanda miRanda
14034 chr2 202149834 202149834 1 + G T ESCA 202149827 + 202149807 202149847 41 TCAGGCTTGTCAGGGGGATAACTACCAGAAAGGTATACCTG TCAGGCTTGTCAGGGGGATAACTACCATAAAGGTATACCTG < 41bp 1 0.708752337706286 1 0.887961626052856 experiment 0.582495324587428 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149827 chr2:202149834 nonsynonymous SNV 0.816 1 hm6A_associated_SNPs_37215 0 0 0 1 202149830 202149852 mRNA hsa-miR-421 CASP8 miRanda miRanda
14034 chr2 202149834 202149834 1 + G T ESCA 202149853 + 202149833 202149873 41 AGAAAGGTATACCTGTTGAGACTGATTCAGAGGAGCAACCC ATAAAGGTATACCTGTTGAGACTGATTCAGAGGAGCAACCC < 41bp 1 0.75640441796659 1 0.968822121620178 experiment 0.487191164066821 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149853 chr2:202149834 nonsynonymous SNV 0.816 1 hm6A_associated_SNPs_37216 0 0 0 1 202149830 202149852 mRNA hsa-miR-421 CASP8 miRanda miRanda
14034 chr9 102713526 102713526 1 + C G ESCA 102713525 + 102713505 102713545 41 AGCAATTTAATGATGAAGAAACTTTGCTACAGCCTCCTTTG AGCAATTTAATGATGAAGAAAGTTTGCTACAGCCTCCTTTG Direct Loss 1 0.374328566375173 1 0.994197726249695 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 STX17 ENSG00000136874 CDS Human protein_coding chr9:102713525 chr9:102713526 nonsynonymous SNV 0.876 0 hm6A_associated_SNPs_37221 0 0 0 1 102713520 102713541 mRNA hsa-miR-485-5p STX17 miRanda miRanda
14034 chr2 66775136 66775136 1 + T G ESCA 66775118 + 66775098 66775138 41 GAAAAAGCAGTTGGCACAAGACACGGGACTCACCATCCTTC GAAAAAGCAGTTGGCACAAGACACGGGACTCACCATCCGTC < 41bp 1 0.303422593045356 1 0.56682550907135 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66775118 chr2:66775136 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_37240 0 0 0 1 66775127 66775150 mRNA hsa-miR-367 MEIS1 miRanda miRanda
14034 chr1 236704981 236704981 1 + C T ESCA 236704990 + 236704970 236705010 41 AAGCATCTAGTCTGGAACTGACAGAGATAAGTAGAGAAAAT AAGCATCTAGTTTGGAACTGACAGAGATAAGTAGAGAAAAT < 41bp 1 0.381304787001833 1 0.732186257839203 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 12 LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236704990 chr1:236704981 synonymous SNV . 0 hm6A_associated_SNPs_37262 0 0 1 1 236704971 236704992 mRNA hsa-miR-223 LGALS8 miRanda miRanda
14034 chr7 116199022 116199022 1 + C T ESCA 116199004 + 116198984 116199024 41 CACTTCTTCCTTTTAGATTGACTTTGAAGATGTGATTGCAG CACTTCTTCCTTTTAGATTGACTTTGAAGATGTGATTGTAG < 41bp 1 0.76610000038889 1 0.778352856636047 experiment 0.46779999922222 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 CAV1 ENSG00000105974 CDS Human protein_coding chr7:116199004 chr7:116199022 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_37265 0 0 1 1 116199006 116199027 mRNA hsa-miR-544 CAV1 miRanda miRanda
14034 chrX 48759676 48759676 1 + A C ESCA 48759657 + 48759637 48759677 41 GGATCGAGAGCGTGGCTATGACAAGGTAGACAGAGAGAGAG GGATCGAGAGCGTGGCTATGACAAGGTAGACAGAGAGAGCG < 41bp 1 0.597584609463226 1 0.936409413814545 experiment 0.804830781073549 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759657 chrX:48759676 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_37304 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759676 48759676 1 + A C ESCA 48759666 + 48759646 48759686 41 GCGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACA GCGTGGCTATGACAAGGTAGACAGAGAGAGCGAGCGAGACA < 41bp 1 0.5172957061785 1 0.970413208007812 experiment 0.965408587642999 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759666 chrX:48759676 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_37305 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759676 48759676 1 + A C ESCA 48759684 + 48759664 48759704 41 AGACAGAGAGAGAGAGCGAGACAGGGAACGGGATCGGGACC AGACAGAGAGAGCGAGCGAGACAGGGAACGGGATCGGGACC < 41bp 1 0.392582028232614 1 0.988568246364594 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759684 chrX:48759676 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_37306 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chr6 76385617 76385617 1 + G C ESCA 76385623 + 76385603 76385643 41 TATTAAATACCTCTGATCTAACTAAATGTGAATGGTGTAAT TATTAAATACCTCTCATCTAACTAAATGTGAATGGTGTAAT < 41bp 1 0.326619123161949 1 0.070689469575882 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76385623 chr6:76385617 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_37310 0 0 1 3 76385614 76385634 mRNA hsa-miR-23a SENP6 miRanda miRanda
14034 chr6 76385617 76385617 1 + G C ESCA 76385623 + 76385603 76385643 41 TATTAAATACCTCTGATCTAACTAAATGTGAATGGTGTAAT TATTAAATACCTCTCATCTAACTAAATGTGAATGGTGTAAT < 41bp 1 0.326619123161949 1 0.070689469575882 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76385623 chr6:76385617 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_37310 0 0 1 3 76385614 76385634 mRNA hsa-miR-23b SENP6 miRanda miRanda
14034 chr6 76385617 76385617 1 + G C ESCA 76385623 + 76385603 76385643 41 TATTAAATACCTCTGATCTAACTAAATGTGAATGGTGTAAT TATTAAATACCTCTCATCTAACTAAATGTGAATGGTGTAAT < 41bp 1 0.326619123161949 1 0.070689469575882 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76385623 chr6:76385617 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_37310 0 0 1 3 76385601 76385621 mRNA hsa-miR-383 SENP6 miRanda miRanda
14034 chr1 235564837 235564837 1 + A G ESCA 235564842 + 235564822 235564862 41 CTGGTTAGGAGTAGAATGGGACAATCCCGAGAGAGGAAAGC CTGGTTAGGAGTAGAGTGGGACAATCCCGAGAGAGGAAAGC < 41bp 1 0.776154155792163 1 0.663481175899506 experiment 0.447691688415675 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 TBCE ENSG00000116957 CDS Human protein_coding chr1:235564842 chr1:235564837 synonymous SNV . 0 hm6A_associated_SNPs_37317 0 0 1 1 235564828 235564848 mRNA hsa-miR-219-5p TBCE miRanda miRanda
14034 chr6 42985607 42985607 1 + C T GBM 42985626 + 42985606 42985646 41 TCACACCCCGAGTGTCAGGGACAGTTCCTGGGGCCCGGGAT TTACACCCCGAGTGTCAGGGACAGTTCCTGGGGCCCGGGAT < 41bp 1 0.7580253739968 1 0.0817760825157166 experiment 0.483949252006401 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985626 chr6:42985607 synonymous SNV . 0 hm6A_associated_SNPs_37342 0 0 1 1 42985607 42985629 mRNA hsa-miR-874 KLHDC3 miRanda miRanda
14034 chr17 62532771 62532771 1 + C T GBM 62532751 + 62532731 62532771 41 ACTGTTTGAAGAAGGTTTAAACATTCAAAAGCAAAGATTAC ACTGTTTGAAGAAGGTTTAAACATTCAAAAGCAAAGATTAT < 41bp 1 0.570879837135637 1 0.715762495994568 experiment 0.858240325728727 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532751 chr17:62532771 stopgain 0.997 0 hm6A_associated_SNPs_37352 0 0 1 1 62532769 62532796 mRNA hsa-miR-9 CCDC45 miRanda miRanda
14034 chr11 71184712 71184712 1 + G A GBM 71184715 + 71184695 71184735 41 ACACCAGGGTGGATCTCGTGACTATGGTCACCAGCAAGGTA ACACCAGGGTGGATCTCATGACTATGGTCACCAGCAAGGTA < 41bp 1 0.149715939729502 1 0.976318836212158 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 18 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71184715 chr11:71184712 nonsynonymous SNV 0.862 2 hm6A_associated_SNPs_37381 0 0 1 1 71184708 71184730 mRNA hsa-miR-138 NADSYN1 miRanda miRanda
14034 chr15 91483616 91483616 1 + G C GBM 91483630 + 91483610 91483650 41 GCTCTTGCAACGTTTACTGGACATGGGAGAGACTGACCTCA GCTCTTCCAACGTTTACTGGACATGGGAGAGACTGACCTCA < 41bp 1 0.705808531668629 1 0.804559111595154 experiment 0.588382936662741 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 UNC45A ENSG00000140553 CDS Human protein_coding chr15:91483630 chr15:91483616 nonsynonymous SNV 0.903 3 hm6A_associated_SNPs_37406 0 0 1 1 91483595 91483617 mRNA hsa-miR-335 UNC45A miRanda miRanda
14034 chr6 32945927 32945927 1 + G T GBM 32945920 + 32945900 32945940 41 TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCA TAGCTTCGGGCAGTACATGAACAACTGTCTGCTCTGTCCCA < 41bp 1 0.560056371100014 1 0.869978725910187 experiment 0.879887257799973 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945920 chr6:32945927 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_37440 0 0 1 3 32945903 32945928 mRNA hsa-miR-199a-5p BRD2 miRanda miRanda
14034 chr6 32945927 32945927 1 + G T GBM 32945920 + 32945900 32945940 41 TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCA TAGCTTCGGGCAGTACATGAACAACTGTCTGCTCTGTCCCA < 41bp 1 0.560056371100014 1 0.869978725910187 experiment 0.879887257799973 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945920 chr6:32945927 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_37440 0 0 1 3 32945903 32945928 mRNA hsa-miR-199b-5p BRD2 miRanda miRanda
14034 chr6 32945927 32945927 1 + G T GBM 32945920 + 32945900 32945940 41 TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCA TAGCTTCGGGCAGTACATGAACAACTGTCTGCTCTGTCCCA < 41bp 1 0.560056371100014 1 0.869978725910187 experiment 0.879887257799973 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945920 chr6:32945927 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_37440 0 0 1 3 32945925 32945946 mRNA hsa-miR-504 BRD2 miRanda miRanda
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046479 lncRNA hsa-let-7b-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046479 lncRNA hsa-let-7c-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046476 lncRNA hsa-miR-4500 XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046446 73046467 lncRNA hsa-miR-30b-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046446 73046468 lncRNA hsa-miR-30c-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAACCCTTCCTCTTTTCTATTGT < 41bp 1 0.158932317387452 1 0.656007826328278 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046466 . . 0 hm6A_associated_SNPs_37441 0 0 1 13 73046446 73046467 lncRNA hsa-miR-30d-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046479 lncRNA hsa-let-7b-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046479 lncRNA hsa-let-7c-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046476 lncRNA hsa-miR-4500 XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046446 73046467 lncRNA hsa-miR-30b-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046446 73046468 lncRNA hsa-miR-30c-5p XIST miRanda starBase2
14034 chrX 73046466 73046466 1 - T A GBM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAACCCTTCCTCTTTT < 41bp 1 0.315535077958554 1 0.698187947273254 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 33 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046466 . . 0 hm6A_associated_SNPs_37442 0 0 1 13 73046446 73046467 lncRNA hsa-miR-30d-5p XIST miRanda starBase2
14034 chr17 40175812 40175812 1 + G T GBM 40175793 + 40175773 40175813 41 GTGGGAGGTGTCAGTGGCGGACCGGCGCTCCCTCCTGGAGC GTGGGAGGTGTCAGTGGCGGACCGGCGCTCCCTCCTGGATC < 41bp 1 0.664071985856835 1 0.840083479881287 experiment 0.67185602828633 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40175793 chr17:40175812 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_37463 0 0 1 1 40175806 40175826 mRNA hsa-miR-411 NKIRAS2 miRanda miRanda
14034 chr1 47838725 47838725 1 + C T GBM 47838718 + 47838698 47838738 41 AGACAACCTTCAAGGATGGAACAAGACCATGGATGGGAAGG AGACAACCTTCAAGGATGGAACAAGACTATGGATGGGAAGG < 41bp 1 0.798635906746543 1 0.982478737831116 experiment 0.402728186506913 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 28 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838718 chr1:47838725 synonymous SNV . 0 hm6A_associated_SNPs_37497 0 0 1 2 47838705 47838728 mRNA hsa-miR-135a CMPK1 miRanda miRanda
14034 chr1 47838725 47838725 1 + C T GBM 47838718 + 47838698 47838738 41 AGACAACCTTCAAGGATGGAACAAGACCATGGATGGGAAGG AGACAACCTTCAAGGATGGAACAAGACTATGGATGGGAAGG < 41bp 1 0.798635906746543 1 0.982478737831116 experiment 0.402728186506913 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 28 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838718 chr1:47838725 synonymous SNV . 0 hm6A_associated_SNPs_37497 0 0 1 2 47838705 47838728 mRNA hsa-miR-135b CMPK1 miRanda miRanda
14034 chr2 217366127 217366127 1 + G A GBM 217366120 + 217366100 217366140 41 AAGACTGAAGGAGTTGAAAGACCAGTAGACGCTCCTCTACT AAGACTGAAGGAGTTGAAAGACCAGTAAACGCTCCTCTACT < 41bp 1 0.70907419919591 1 0.848713278770447 experiment 0.581851601608181 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 28 RPL37A ENSG00000197756 CDS Human protein_coding chr2:217366120 chr2:217366127 synonymous SNV . 0 hm6A_associated_SNPs_37503 0 0 1 1 217366112 217366136 mRNA hsa-miR-28-5p RPL37A miRanda miRanda
14034 chr13 52605223 52605223 1 + T A GBM 52605235 + 52605215 52605255 41 CGTCACAATAAAGAAGAAAAACTGTAGGTTGTGTAGCTGGA CGTCACAAAAAAGAAGAAAAACTGTAGGTTGTGTAGCTGGA < 41bp 1 0.791599364168405 1 0.979512929916382 experiment 0.41680127166319 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 UTP14C ENSG00000253797 CDS Human protein_coding chr13:52605235 chr13:52605223 nonsynonymous SNV 0.140 0 hm6A_associated_SNPs_37524 0 0 1 1 52605221 52605242 mRNA hsa-miR-139-5p ALG11 miRanda miRanda
14034 chr11 76917245 76917245 1 + G A GBM 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGACACTGACAAGGTGAGGGTCA < 41bp 1 0.180782764500998 1 0.769352078437805 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917245 nonsynonymous SNV 0.538 0 hm6A_associated_SNPs_37543 0 0 0 2 76917223 76917245 mRNA hsa-miR-223 MYO7A miRanda miRanda
14034 chr11 76917245 76917245 1 + G A GBM 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGACACTGACAAGGTGAGGGTCA < 41bp 1 0.180782764500998 1 0.769352078437805 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917245 nonsynonymous SNV 0.538 0 hm6A_associated_SNPs_37543 0 0 0 2 76917234 76917247 mRNA hsa-miR-873 MYO7A miRanda miRanda
14034 chr19 6744568 6744568 1 + C A GBM 6744575 + 6744555 6744595 41 GTCCTTACAGAAGCTCCAAGACATGGATGAACGCAGGGCCA GTCCTTACAGAAGATCCAAGACATGGATGAACGCAGGGCCA < 41bp 1 0.452885904907039 1 0.52143669128418 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6744575 chr19:6744568 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_37568 0 0 1 2 6744565 6744570 mRNA hsa-miR-21 TRIP10 miRanda miRanda
14034 chr19 6744568 6744568 1 + C A GBM 6744575 + 6744555 6744595 41 GTCCTTACAGAAGCTCCAAGACATGGATGAACGCAGGGCCA GTCCTTACAGAAGATCCAAGACATGGATGAACGCAGGGCCA < 41bp 1 0.452885904907039 1 0.52143669128418 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6744575 chr19:6744568 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_37568 0 0 1 2 6744565 6744570 mRNA hsa-miR-590-5p TRIP10 miRanda miRanda
14034 chr11 13395733 13395733 1 + G T GBM 13395716 + 13395696 13395736 41 TGAATATTTTCACCAAGATGACATAGGACATCTTGCAGAAT TGAATATTTTCACCAAGATGACATAGGACATCTTGCATAAT < 41bp 1 0.653211821323798 1 0.0287489891052246 experiment 0.693576357352404 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13395716 chr11:13395733 stopgain 1.000 1 hm6A_associated_SNPs_37584 0 0 0 1 13395715 13395736 mRNA hsa-miR-544 ARNTL miRanda miRanda
14034 chrX 73046529 73046529 1 - C T GBM 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGCCCATGACCCAAAACCCAGGAAGGATAGAAGCTT < 41bp 1 0.135263937607467 1 0.887436807155609 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046529 . . 0 hm6A_associated_SNPs_37587 0 0 1 2 73046519 73046540 lncRNA hsa-miR-1343-3p XIST miRanda starBase2
14034 chrX 73046529 73046529 1 - C T GBM 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGCCCATGACCCAAAACCCAGGAAGGATAGAAGCTT < 41bp 1 0.135263937607467 1 0.887436807155609 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046529 . . 0 hm6A_associated_SNPs_37587 0 0 1 2 73046519 73046539 lncRNA hsa-miR-6783-3p XIST miRanda starBase2
14034 chr15 93486285 93486285 1 + G A GBM 93486293 + 93486273 93486313 41 AAAAAAGAGGACGAAATCAAACAATGGTATATTTTCCATCA AAAAAAGAGGACAAAATCAAACAATGGTATATTTTCCATCA < 41bp 1 0.320819926300927 1 0.988723874092102 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 CHD2 ENSG00000173575 CDS Human protein_coding chr15:93486293 chr15:93486285 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_37600 0 0 1 3 93486267 93486288 mRNA hsa-miR-133a CHD2 miRanda miRanda
14034 chr15 93486285 93486285 1 + G A GBM 93486293 + 93486273 93486313 41 AAAAAAGAGGACGAAATCAAACAATGGTATATTTTCCATCA AAAAAAGAGGACAAAATCAAACAATGGTATATTTTCCATCA < 41bp 1 0.320819926300927 1 0.988723874092102 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 CHD2 ENSG00000173575 CDS Human protein_coding chr15:93486293 chr15:93486285 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_37600 0 0 1 3 93486267 93486288 mRNA hsa-miR-133b CHD2 miRanda miRanda
14034 chr15 93486285 93486285 1 + G A GBM 93486293 + 93486273 93486313 41 AAAAAAGAGGACGAAATCAAACAATGGTATATTTTCCATCA AAAAAAGAGGACAAAATCAAACAATGGTATATTTTCCATCA < 41bp 1 0.320819926300927 1 0.988723874092102 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 13 CHD2 ENSG00000173575 CDS Human protein_coding chr15:93486293 chr15:93486285 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_37600 0 0 1 3 93486271 93486292 mRNA hsa-miR-876-5p CHD2 miRanda miRanda
14034 chr19 49518864 49518864 1 + C A GBM 49518851 + 49518831 49518871 41 TACAGAAGTGCAGGTGGATGACATCAAGCGGGTCTACTCAC TACAGAAGTGCAGGTGGATGACATCAAGCGGGTATACTCAC < 41bp 1 0.413277978080635 1 0.96158766746521 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 34 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49518851 chr19:49518864 nonsynonymous SNV 0.982 0 hm6A_associated_SNPs_37608 0 0 1 1 49518848 49518869 mRNA hsa-miR-411 RUVBL2 miRanda miRanda
14034 chr16 68598588 68598588 1 + G A GBM 68598595 + 68598575 68598615 41 AGAATTCATACTCGAAATAAACTCTAGGAACCGTGAAATTA AGAATTCATACTCAAAATAAACTCTAGGAACCGTGAAATTA < 41bp 1 0.769679359298923 1 0.999708473682404 experiment 0.460641281402153 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 ZFP90 ENSG00000184939 CDS Human protein_coding chr16:68598595 chr16:68598588 nonsynonymous SNV 0.900 1 hm6A_associated_SNPs_37784 0 0 0 1 68598586 68598605 mRNA hsa-miR-384 ZFP90 miRanda miRanda
14034 chr3 160132259 160132259 1 + G T GBM 160132248 + 160132228 160132268 41 CAAGTTAGAGAAAAGTTAAAACATGCCACGAGTAAAGCCAA CAAGTTAGAGAAAAGTTAAAACATGCCACGATTAAAGCCAA < 41bp 1 0.799893316382473 1 0.811042666435242 experiment 0.400213367235054 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132248 chr3:160132259 nonsynonymous SNV 0.792 2 hm6A_associated_SNPs_37810 0 0 1 3 160132246 160132269 mRNA hsa-miR-135a SMC4 miRanda miRanda
14034 chr3 160132259 160132259 1 + G T GBM 160132248 + 160132228 160132268 41 CAAGTTAGAGAAAAGTTAAAACATGCCACGAGTAAAGCCAA CAAGTTAGAGAAAAGTTAAAACATGCCACGATTAAAGCCAA < 41bp 1 0.799893316382473 1 0.811042666435242 experiment 0.400213367235054 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132248 chr3:160132259 nonsynonymous SNV 0.792 2 hm6A_associated_SNPs_37810 0 0 1 3 160132256 160132278 mRNA hsa-miR-145 SMC4 miRanda miRanda
14034 chr3 160132259 160132259 1 + G T GBM 160132248 + 160132228 160132268 41 CAAGTTAGAGAAAAGTTAAAACATGCCACGAGTAAAGCCAA CAAGTTAGAGAAAAGTTAAAACATGCCACGATTAAAGCCAA < 41bp 1 0.799893316382473 1 0.811042666435242 experiment 0.400213367235054 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132248 chr3:160132259 nonsynonymous SNV 0.792 2 hm6A_associated_SNPs_37810 0 0 1 3 160132246 160132269 mRNA hsa-miR-135b SMC4 miRanda miRanda
14034 chr3 160132259 160132259 1 + G T GBM 160132272 + 160132252 160132292 41 GCCACGAGTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA GCCACGATTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA < 41bp 1 0.186879630008466 1 0.90459531545639 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132272 chr3:160132259 nonsynonymous SNV 0.792 2 hm6A_associated_SNPs_37811 0 0 1 3 160132246 160132269 mRNA hsa-miR-135a SMC4 miRanda miRanda
14034 chr3 160132259 160132259 1 + G T GBM 160132272 + 160132252 160132292 41 GCCACGAGTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA GCCACGATTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA < 41bp 1 0.186879630008466 1 0.90459531545639 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132272 chr3:160132259 nonsynonymous SNV 0.792 2 hm6A_associated_SNPs_37811 0 0 1 3 160132256 160132278 mRNA hsa-miR-145 SMC4 miRanda miRanda
14034 chr3 160132259 160132259 1 + G T GBM 160132272 + 160132252 160132292 41 GCCACGAGTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA GCCACGATTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA < 41bp 1 0.186879630008466 1 0.90459531545639 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132272 chr3:160132259 nonsynonymous SNV 0.792 2 hm6A_associated_SNPs_37811 0 0 1 3 160132246 160132269 mRNA hsa-miR-135b SMC4 miRanda miRanda
14034 chr11 6592208 6592208 1 + C T GBM 6592215 + 6592195 6592235 41 TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC TTAGAGACCGAGGTTCTAGAACTGAGCCAGTTGGTGGGCAC < 41bp 1 0.562653435519596 1 0.992235064506531 experiment 0.874693128960808 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 14 DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592215 chr11:6592208 nonsynonymous SNV 0.192 0 hm6A_associated_SNPs_37814 0 0 0 2 6592202 6592223 mRNA hsa-miR-24 DNHD1 miRanda miRanda
14034 chr11 6592208 6592208 1 + C T GBM 6592215 + 6592195 6592235 41 TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC TTAGAGACCGAGGTTCTAGAACTGAGCCAGTTGGTGGGCAC < 41bp 1 0.562653435519596 1 0.992235064506531 experiment 0.874693128960808 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 14 DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592215 chr11:6592208 nonsynonymous SNV 0.192 0 hm6A_associated_SNPs_37814 0 0 0 2 6592204 6592225 mRNA hsa-miR-149 DNHD1 miRanda miRanda
14034 chr16 31141388 31141388 1 + G T GBM 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAATACACTGTACTTTG < 41bp 1 0.372496997747894 1 0.985267221927643 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141388 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_37842 0 0 1 4 31141374 31141396 mRNA hsa-miR-199a-5p MYST1 miRanda miRanda
14034 chr16 31141388 31141388 1 + G T GBM 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAATACACTGTACTTTG < 41bp 1 0.372496997747894 1 0.985267221927643 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141388 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_37842 0 0 1 4 31141373 31141394 mRNA hsa-miR-187 MYST1 miRanda miRanda
14034 chr16 31141388 31141388 1 + G T GBM 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAATACACTGTACTTTG < 41bp 1 0.372496997747894 1 0.985267221927643 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141388 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_37842 0 0 1 4 31141374 31141396 mRNA hsa-miR-199b-5p MYST1 miRanda miRanda
14034 chr16 31141388 31141388 1 + G T GBM 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAATACACTGTACTTTG < 41bp 1 0.372496997747894 1 0.985267221927643 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141388 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_37842 0 0 1 4 31141377 31141397 mRNA hsa-miR-128 MYST1 miRanda miRanda
14034 chr3 128629636 128629636 1 + G T GBM 128629651 + 128629631 128629671 41 CTTCAGCCTCTCTCAGCTGGACAAGTGTGAGTGGCATGTCT CTTCATCCTCTCTCAGCTGGACAAGTGTGAGTGGCATGTCT < 41bp 1 0.511483611963577 1 0.301638931035995 experiment 0.977032776072846 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128629651 chr3:128629636 nonsynonymous SNV 0.511 0 hm6A_associated_SNPs_37870 0 0 1 1 128629621 128629641 mRNA hsa-miR-485-5p ACAD9 miRanda miRanda
14034 chr6 34211289 34211289 1 + A C GBM 34211292 + 34211272 34211312 41 CCAAGGGGCAGACCCAAAAAACTGGTAGGTGAAGAAGCAGA CCAAGGGGCAGACCCAACAAACTGGTAGGTGAAGAAGCAGA < 41bp 1 0.16765935550572 1 0.087421327829361 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34211292 chr6:34211289 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_37906 0 0 1 1 34211276 34211295 mRNA hsa-miR-145 HMGA1 miRanda miRanda
14034 chr19 17384943 17384943 1 + G A GBM 17384928 + 17384908 17384948 41 CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTC CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCAAGCTC < 41bp 1 0.159898000160246 1 0.83866685628891 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17384928 chr19:17384943 nonsynonymous SNV 0.761 1 hm6A_associated_SNPs_37942 0 0 1 1 17384937 17384960 mRNA hsa-miR-708 C19orf62 miRanda miRanda
14034 chr3 56628028 56628028 1 + G A GBM 56628041 + 56628021 56628061 41 CGAGACAGACGACGACAAAAACAATTAGAGCATCAGGTATT CGAGACAAACGACGACAAAAACAATTAGAGCATCAGGTATT < 41bp 1 0.571042833773115 1 0.546734929084778 experiment 0.857914332453771 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56628041 chr3:56628028 nonsynonymous SNV 0.536 3 hm6A_associated_SNPs_37949 0 0 1 1 56628019 56628042 mRNA hsa-miR-129-5p CCDC66 miRanda miRanda
14034 chr7 104748042 104748042 1 + G A GBM 104748038 + 104748018 104748058 41 CCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAGCC CCTGGAAACGCCTGCACATGACAGAGCTGAGCCCAACAGCC < 41bp 1 0.780240222590552 1 0.996256709098816 experiment 0.439519554818896 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748038 chr7:104748042 synonymous SNV . 0 hm6A_associated_SNPs_37951 0 0 1 2 104748029 104748051 mRNA hsa-miR-24 MLL5 miRanda miRanda
14034 chr7 104748042 104748042 1 + G A GBM 104748038 + 104748018 104748058 41 CCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAGCC CCTGGAAACGCCTGCACATGACAGAGCTGAGCCCAACAGCC < 41bp 1 0.780240222590552 1 0.996256709098816 experiment 0.439519554818896 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748038 chr7:104748042 synonymous SNV . 0 hm6A_associated_SNPs_37951 0 0 1 2 104748020 104748044 mRNA hsa-miR-339-5p MLL5 miRanda miRanda
14034 chr6 161513094 161513094 1 + G A GBM 161513097 + 161513077 161513117 41 GTTTAGACAGAAGATAGGAGACAAATATATAAGCTTTGCCC GTTTAGACAGAAGATAGAAGACAAATATATAAGCTTTGCCC < 41bp 1 0.697938402563042 1 0.252538353204727 experiment 0.604123194873915 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161513097 chr6:161513094 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_37965 0 0 1 2 161513094 161513112 mRNA hsa-miR-21 MAP3K4 miRanda miRanda
14034 chr6 161513094 161513094 1 + G A GBM 161513097 + 161513077 161513117 41 GTTTAGACAGAAGATAGGAGACAAATATATAAGCTTTGCCC GTTTAGACAGAAGATAGAAGACAAATATATAAGCTTTGCCC < 41bp 1 0.697938402563042 1 0.252538353204727 experiment 0.604123194873915 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 18 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161513097 chr6:161513094 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_37965 0 0 1 2 161513091 161513112 mRNA hsa-miR-590-5p MAP3K4 miRanda miRanda
14034 chrX 73040823 73040823 1 - C T GBM 73040821 - 73040801 73040841 41 GATTAAACAAGAATAAGAGAACATTTTATCATCATCTGCTT GATTAAACAAGAATAAGAAAACATTTTATCATCATCTGCTT < 41bp 1 0.303157513376042 1 0.133483797311783 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040821 chrX:73040823 . . 0 hm6A_associated_SNPs_37995 0 0 1 1 73040812 73040833 lncRNA hsa-miR-3163 XIST miRanda starBase2
14034 chr16 71958688 71958688 1 + C T GBM 71958679 + 71958659 71958699 41 CTTTGTGTTTCAGGTAGATGACATTAATGCTGATAAGAATA CTTTGTGTTTCAGGTAGATGACATTAATGTTGATAAGAATA < 41bp 1 0.680402874728439 1 0.00682199001312256 experiment 0.639194250543123 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 IST1 ENSG00000182149 CDS Human protein_coding chr16:71958679 chr16:71958688 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_38009 0 0 1 1 71958676 71958694 mRNA hsa-miR-361-5p KIAA0174 miRanda miRanda
14034 chr4 115544445 115544445 1 + G C GBM 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACCTGCTGCTGCTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.406642473331603 1 0.982145667076111 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 17 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544445 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38016 0 0 0 2 115544441 115544464 mRNA hsa-miR-181b UGT8 miRanda miRanda
14034 chr4 115544445 115544445 1 + G C GBM 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACCTGCTGCTGCTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.406642473331603 1 0.982145667076111 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 17 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544445 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38016 0 0 0 2 115544441 115544464 mRNA hsa-miR-181d UGT8 miRanda miRanda
14034 chr21 37445093 37445093 1 + G T GBM 37445094 + 37445074 37445114 41 GCCCAGAAGAAGGTGCAGAGACCCCTGTGTACTTGGCCCTT GCCCAGAAGAAGGTGCAGATACCCCTGTGTACTTGGCCCTT Direct Loss 1 0.671360891390161 1 0.8834627866745 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 CBR1 ENSG00000159228 CDS Human protein_coding chr21:37445094 chr21:37445093 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_38017 0 0 1 1 37445088 37445108 mRNA hsa-miR-224 CBR1 miRanda miRanda
14034 chr12 117387452 117387452 1 + G A GBM 117387463 + 117387443 117387483 41 CGAGCTGGAGCATGTTCCTGACACAGTTTTGTGTGATGTGC CGAGCTGGAACATGTTCCTGACACAGTTTTGTGTGATGTGC < 41bp 1 0.497359814572741 1 0.0049864649772644 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 FBXW8 ENSG00000174989 CDS Human protein_coding chr12:117387463 chr12:117387452 synonymous SNV . 0 hm6A_associated_SNPs_38044 0 0 1 1 117387442 117387463 mRNA hsa-miR-873 FBXW8 miRanda miRanda
14034 chr1 150318578 150318578 1 + G A GBM 150318561 + 150318541 150318581 41 ATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCAC ATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTACAC < 41bp 1 0.799870115330874 1 0.798614740371704 experiment 0.400259769338253 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 38 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150318561 chr1:150318578 synonymous SNV . 0 hm6A_associated_SNPs_38053 0 0 1 1 150318561 150318583 mRNA hsa-miR-210 PRPF3 miRanda miRanda
14034 chr3 89259060 89259060 1 + C G GBM 89259080 + 89259060 89259100 41 CCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC GCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC < 41bp 1 0.144157943125199 1 0.915403008460999 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89259080 chr3:89259060 stopgain 1.000 1 hm6A_associated_SNPs_38070 0 0 0 6 89259051 89259073 mRNA hsa-miR-25 EPHA3 miRanda miRanda
14034 chr3 89259060 89259060 1 + C G GBM 89259080 + 89259060 89259100 41 CCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC GCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC < 41bp 1 0.144157943125199 1 0.915403008460999 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89259080 chr3:89259060 stopgain 1.000 1 hm6A_associated_SNPs_38070 0 0 0 6 89259051 89259073 mRNA hsa-miR-32 EPHA3 miRanda miRanda
14034 chr3 89259060 89259060 1 + C G GBM 89259080 + 89259060 89259100 41 CCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC GCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC < 41bp 1 0.144157943125199 1 0.915403008460999 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89259080 chr3:89259060 stopgain 1.000 1 hm6A_associated_SNPs_38070 0 0 0 6 89259050 89259073 mRNA hsa-miR-92a EPHA3 miRanda miRanda
14034 chr3 89259060 89259060 1 + C G GBM 89259080 + 89259060 89259100 41 CCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC GCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC < 41bp 1 0.144157943125199 1 0.915403008460999 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89259080 chr3:89259060 stopgain 1.000 1 hm6A_associated_SNPs_38070 0 0 0 6 89259046 89259073 mRNA hsa-miR-363 EPHA3 miRanda miRanda
14034 chr3 89259060 89259060 1 + C G GBM 89259080 + 89259060 89259100 41 CCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC GCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC < 41bp 1 0.144157943125199 1 0.915403008460999 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89259080 chr3:89259060 stopgain 1.000 1 hm6A_associated_SNPs_38070 0 0 0 6 89259051 89259073 mRNA hsa-miR-367 EPHA3 miRanda miRanda
14034 chr3 89259060 89259060 1 + C G GBM 89259080 + 89259060 89259100 41 CCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC GCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC < 41bp 1 0.144157943125199 1 0.915403008460999 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89259080 chr3:89259060 stopgain 1.000 1 hm6A_associated_SNPs_38070 0 0 0 6 89259052 89259073 mRNA hsa-miR-92b EPHA3 miRanda miRanda
14034 chr4 186320727 186320727 1 - A T GBM 186320717 - 186320697 186320737 41 TCTTATTACATAAACTGAAAACAGGATAAAAACGGAGTGAA TCTTATTACAAAAACTGAAAACAGGATAAAAACGGAGTGAA < 41bp 1 0.132587194696197 1 0.753522276878357 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 11 ANKRD37 ENSG00000186352 CDS Human protein_coding chr4:186320717 chr4:186320727 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_38079 0 0 1 1 186320718 186320739 mRNA hsa-miR-223 UFSP2 miRanda miRanda
14034 chr5 180651258 180651258 1 + C T GBM 180651247 + 180651227 180651267 41 GGGGGCTGGCGCGGGGTGGGACACCCCCATGCGGGATGAAG GGGGGCTGGCGCGGGGTGGGACACCCCCATGTGGGATGAAG < 41bp 1 0.718802075219908 1 0.979409575462341 experiment 0.562395849560184 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651247 chr5:180651258 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_38088 0 0 1 1 180651251 180651274 mRNA hsa-miR-187 TRIM41 miRanda miRanda
14034 chr5 180651258 180651258 1 + C T GBM 180651268 + 180651248 180651288 41 CACCCCCATGCGGGATGAAGACTACGAGGGTGACATGGAGG CACCCCCATGTGGGATGAAGACTACGAGGGTGACATGGAGG < 41bp 1 0.727184993040796 1 0.990466952323914 experiment 0.545630013918408 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651268 chr5:180651258 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_38089 0 0 1 1 180651251 180651274 mRNA hsa-miR-187 TRIM41 miRanda miRanda
14034 chr9 35660940 35660940 1 + C T GBM 35660947 + 35660927 35660967 41 CCCCACACAGAGGCCAGCAGACCTCTTCCTGAGGACTTCTG CCCCACACAGAGGTCAGCAGACCTCTTCCTGAGGACTTCTG < 41bp 1 0.647864928977101 1 0.992323994636536 experiment 0.704270142045798 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660947 chr9:35660940 nonsynonymous SNV 0.898 0 hm6A_associated_SNPs_38112 0 0 0 1 35660921 35660944 mRNA hsa-miR-149 CCDC107 miRanda miRanda
14034 chr5 130721242 130721242 1 + C T GBM 130721255 + 130721235 130721275 41 GAAAAGGCGACGGCGGATTGACAGAAGTATGATTGGAGAGC GAAAAGGTGACGGCGGATTGACAGAAGTATGATTGGAGAGC < 41bp 1 0.342421182583211 1 0.089305579662323 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130721255 chr5:130721242 stopgain 1.000 1 hm6A_associated_SNPs_38127 0 0 1 2 130721236 130721245 mRNA hsa-miR-204 CDC42SE2 miRanda miRanda
14034 chr5 130721242 130721242 1 + C T GBM 130721255 + 130721235 130721275 41 GAAAAGGCGACGGCGGATTGACAGAAGTATGATTGGAGAGC GAAAAGGTGACGGCGGATTGACAGAAGTATGATTGGAGAGC < 41bp 1 0.342421182583211 1 0.089305579662323 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130721255 chr5:130721242 stopgain 1.000 1 hm6A_associated_SNPs_38127 0 0 1 2 130721236 130721245 mRNA hsa-miR-211 CDC42SE2 miRanda miRanda
14034 chr20 21142690 21142690 1 + G A GBM 21142675 + 21142655 21142695 41 AAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGA AAAGAACTTTTCAATTCCTGACCCACATTCACACCAACAGA < 41bp 1 0.336722522960136 1 0.396437525749207 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142675 chr20:21142690 . 0.996 0 hm6A_associated_SNPs_38142 0 0 1 2 21142686 21142706 mRNA hsa-miR-330-5p PLK1S1 miRanda miRanda
14034 chr20 21142690 21142690 1 + G A GBM 21142675 + 21142655 21142695 41 AAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGA AAAGAACTTTTCAATTCCTGACCCACATTCACACCAACAGA < 41bp 1 0.336722522960136 1 0.396437525749207 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142675 chr20:21142690 . 0.996 0 hm6A_associated_SNPs_38142 0 0 1 2 21142687 21142706 mRNA hsa-miR-326 PLK1S1 miRanda miRanda
14034 chr20 21142690 21142690 1 + G A GBM 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACCAACAGACAGCCCAGAGCAGTAATGTG < 41bp 1 0.506246018397356 1 0.750917673110962 experiment 0.987507963205289 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142690 . 0.996 0 hm6A_associated_SNPs_38143 0 0 1 2 21142686 21142706 mRNA hsa-miR-330-5p PLK1S1 miRanda miRanda
14034 chr20 21142690 21142690 1 + G A GBM 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACCAACAGACAGCCCAGAGCAGTAATGTG < 41bp 1 0.506246018397356 1 0.750917673110962 experiment 0.987507963205289 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142690 . 0.996 0 hm6A_associated_SNPs_38143 0 0 1 2 21142687 21142706 mRNA hsa-miR-326 PLK1S1 miRanda miRanda
14034 chr20 33114101 33114101 1 + T C GBM 33114088 + 33114068 33114108 41 GGCAGGCAGAGGTGGAGGAGACACTGAAGCGACTGCAGAGC GGCAGGCAGAGGTGGAGGAGACACTGAAGCGACCGCAGAGC < 41bp 1 0.716848052201685 1 0.829978227615356 experiment 0.56630389559663 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 DYNLRB1 ENSG00000125971 CDS Human protein_coding chr20:33114088 chr20:33114101 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38189 0 0 1 2 33114087 33114112 mRNA hsa-miR-149 DYNLRB1 miRanda miRanda
14034 chr20 33114101 33114101 1 + T C GBM 33114088 + 33114068 33114108 41 GGCAGGCAGAGGTGGAGGAGACACTGAAGCGACTGCAGAGC GGCAGGCAGAGGTGGAGGAGACACTGAAGCGACCGCAGAGC < 41bp 1 0.716848052201685 1 0.829978227615356 experiment 0.56630389559663 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 DYNLRB1 ENSG00000125971 CDS Human protein_coding chr20:33114088 chr20:33114101 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38189 0 0 1 2 33114099 33114122 mRNA hsa-miR-324-5p DYNLRB1 miRanda miRanda
14034 chr9 731229 731229 1 + G A GBM 731212 + 731192 731232 41 CATGAAGAAGAAAGATGGTAACAAAGATTCAAATGGCGCAA CATGAAGAAGAAAGATGGTAACAAAGATTCAAATGGCACAA < 41bp 1 0.706060561598985 1 0.907731294631958 experiment 0.58787887680203 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 38 KANK1 ENSG00000107104 CDS Human protein_coding chr9:731212 chr9:731229 nonsynonymous SNV 0.015 0 hm6A_associated_SNPs_38195 0 0 0 1 731213 731236 mRNA hsa-miR-129-5p KANK1 miRanda miRanda
14034 chr3 196449369 196449369 1 + C T GBM 196449373 + 196449353 196449393 41 AAACAGGACATTCCTGCAGGACTTTATGTGGATCCGTATGA AAACAGGACATTCCTGTAGGACTTTATGTGGATCCGTATGA < 41bp 1 0.619950143453345 1 0.889631032943726 experiment 0.76009971309331 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 PIGX ENSG00000163964 CDS Human protein_coding chr3:196449373 chr3:196449369 nonsynonymous SNV 0.611 0 hm6A_associated_SNPs_38317 0 0 1 1 196449368 196449389 mRNA hsa-miR-127-3p PIGX miRanda miRanda
14034 chr2 190656554 190656554 1 + G A GBM 190656541 + 190656521 190656561 41 CTGTTAAAAGCGAAAATGAAACAATTGCCTGCGGCAACAGT CTGTTAAAAGCGAAAATGAAACAATTGCCTGCGACAACAGT < 41bp 1 0.770522603262029 1 0.730927228927612 experiment 0.458954793475943 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 34 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190656541 chr2:190656554 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_38319 0 0 1 1 190656552 190656575 mRNA hsa-miR-488 PMS1 miRanda miRanda
14034 chr20 29632715 29632715 1 + T C GBM 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTCCGGACAGGTAGCTATTTATTTACT < 41bp 1 0.345723709283171 1 0.00441643595695496 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 18 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632715 nonsynonymous SNV 0.796 3 hm6A_associated_SNPs_38357 0 0 0 2 29632710 29632721 mRNA hsa-miR-378 FRG1B miRanda miRanda
14034 chr20 29632715 29632715 1 + T C GBM 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTCCGGACAGGTAGCTATTTATTTACT < 41bp 1 0.345723709283171 1 0.00441643595695496 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 18 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632715 nonsynonymous SNV 0.796 3 hm6A_associated_SNPs_38357 0 0 0 2 29632709 29632721 mRNA hsa-miR-422a FRG1B miRanda miRanda
14034 chr15 92671619 92671619 1 + G A GBM 92671604 + 92671584 92671624 41 AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTGCAATA AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTACAATA < 41bp 1 0.145895710771572 1 0.656477987766266 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671604 chr15:92671619 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38371 0 0 1 3 92671615 92671635 mRNA hsa-miR-27a SLCO3A1 miRanda miRanda
14034 chr15 92671619 92671619 1 + G A GBM 92671604 + 92671584 92671624 41 AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTGCAATA AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTACAATA < 41bp 1 0.145895710771572 1 0.656477987766266 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671604 chr15:92671619 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38371 0 0 1 3 92671615 92671635 mRNA hsa-miR-27b SLCO3A1 miRanda miRanda
14034 chr15 92671619 92671619 1 + G A GBM 92671604 + 92671584 92671624 41 AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTGCAATA AGCACCTGGCTCAGCCCTGGACCCCTACTCGCCCTACAATA < 41bp 1 0.145895710771572 1 0.656477987766266 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671604 chr15:92671619 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38371 0 0 1 3 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr15 92671619 92671619 1 + G A GBM 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTACAATAATAACTGTGAATGCCAAACCGATT < 41bp 1 0.371675366787643 1 0.947449028491974 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671619 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38372 0 0 1 3 92671615 92671635 mRNA hsa-miR-27a SLCO3A1 miRanda miRanda
14034 chr15 92671619 92671619 1 + G A GBM 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTACAATAATAACTGTGAATGCCAAACCGATT < 41bp 1 0.371675366787643 1 0.947449028491974 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671619 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38372 0 0 1 3 92671615 92671635 mRNA hsa-miR-27b SLCO3A1 miRanda miRanda
14034 chr15 92671619 92671619 1 + G A GBM 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTACAATAATAACTGTGAATGCCAAACCGATT < 41bp 1 0.371675366787643 1 0.947449028491974 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671619 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_38372 0 0 1 3 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr11 114320696 114320696 1 + G A GBM 114320686 + 114320666 114320706 41 AAAATGGGGAAAATGAGAAGACCGTGAGTTGATGCCAGTTA AAAATGGGGAAAATGAGAAGACCGTGAGTTAATGCCAGTTA < 41bp 1 0.570883165411833 1 0.953420162200928 experiment 0.858233669176334 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 31 REXO2 ENSG00000076043 CDS Human protein_coding chr11:114320686 chr11:114320696 synonymous SNV . 0 hm6A_associated_SNPs_38405 0 0 1 2 114320695 114320716 mRNA hsa-miR-103 REXO2 miRanda miRanda
14034 chr11 114320696 114320696 1 + G A GBM 114320686 + 114320666 114320706 41 AAAATGGGGAAAATGAGAAGACCGTGAGTTGATGCCAGTTA AAAATGGGGAAAATGAGAAGACCGTGAGTTAATGCCAGTTA < 41bp 1 0.570883165411833 1 0.953420162200928 experiment 0.858233669176334 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 31 REXO2 ENSG00000076043 CDS Human protein_coding chr11:114320686 chr11:114320696 synonymous SNV . 0 hm6A_associated_SNPs_38405 0 0 1 2 114320695 114320716 mRNA hsa-miR-107 REXO2 miRanda miRanda
14034 chr5 54456839 54456839 1 + C T GBM 54456850 + 54456830 54456870 41 AGTTGTAAACGTGGCCAGTGACTGCCAACTCACAGACAGAA AGTTGTAAATGTGGCCAGTGACTGCCAACTCACAGACAGAA < 41bp 1 0.281958941355053 1 0.904808640480042 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 GPX8 ENSG00000164294 CDS Human protein_coding chr5:54456850 chr5:54456839 synonymous SNV . 0 hm6A_associated_SNPs_38414 0 0 1 2 54456822 54456849 mRNA hsa-miR-193a-3p GPX8 miRanda miRanda
14034 chr5 54456839 54456839 1 + C T GBM 54456850 + 54456830 54456870 41 AGTTGTAAACGTGGCCAGTGACTGCCAACTCACAGACAGAA AGTTGTAAATGTGGCCAGTGACTGCCAACTCACAGACAGAA < 41bp 1 0.281958941355053 1 0.904808640480042 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 GPX8 ENSG00000164294 CDS Human protein_coding chr5:54456850 chr5:54456839 synonymous SNV . 0 hm6A_associated_SNPs_38414 0 0 1 2 54456828 54456849 mRNA hsa-miR-193b GPX8 miRanda miRanda
14034 chr8 27634259 27634259 1 + C A GBM 27634258 + 27634238 27634278 41 AAAAACCACAGAAGAGTTTAACTGCTAAGTATCAACCAAAG AAAAACCACAGAAGAGTTTAAATGCTAAGTATCAACCAAAG Direct Loss 1 0.455267276831803 1 0.980543375015259 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634258 chr8:27634259 nonsynonymous SNV 0.989 2 hm6A_associated_SNPs_38423 0 0 1 1 27634254 27634279 mRNA hsa-miR-9 ESCO2 miRanda miRanda
14034 chr5 74016306 74016306 1 + G T GBM 74016325 + 74016305 74016345 41 AGAATATGTGGATGCAACTAACCTCACTCCAAGATTATGGT ATAATATGTGGATGCAACTAACCTCACTCCAAGATTATGGT < 41bp 1 0.0604966892927124 1 0.218273043632507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 2 HEXB ENSG00000049860 CDS Human protein_coding chr5:74016325 chr5:74016306 stopgain 1.000 1 hm6A_associated_SNPs_38429 0 0 1 1 74016306 74016330 mRNA hsa-let-7f HEXB miRanda miRanda
14034 chr1 160318821 160318821 1 + G A GBM 160318804 + 160318784 160318824 41 GGCAGCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAG GGCAGCTTCAATTAGTGGAGACACAGGGGTTATCCACATAG < 41bp 1 0.617414639574915 1 0.00220677256584167 experiment 0.76517072085017 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 38 NCSTN ENSG00000162736 CDS Human protein_coding chr1:160318804 chr1:160318821 nonsynonymous SNV 0.758 2 hm6A_associated_SNPs_38449 0 0 1 2 160318817 160318838 mRNA hsa-miR-204 NCSTN miRanda miRanda
14034 chr1 160318821 160318821 1 + G A GBM 160318804 + 160318784 160318824 41 GGCAGCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAG GGCAGCTTCAATTAGTGGAGACACAGGGGTTATCCACATAG < 41bp 1 0.617414639574915 1 0.00220677256584167 experiment 0.76517072085017 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 38 NCSTN ENSG00000162736 CDS Human protein_coding chr1:160318804 chr1:160318821 nonsynonymous SNV 0.758 2 hm6A_associated_SNPs_38449 0 0 1 2 160318817 160318838 mRNA hsa-miR-211 NCSTN miRanda miRanda
14034 chr19 9453175 9453175 1 + G T GBM 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGATAAAAGCCT < 41bp 1 0.52102739711594 1 0.979965627193451 experiment 0.957945205768119 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453175 stopgain 0.973 0 hm6A_associated_SNPs_38453 0 0 1 4 9453169 9453193 mRNA hsa-miR-181a ZNF559 miRanda miRanda
14034 chr19 9453175 9453175 1 + G T GBM 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGATAAAAGCCT < 41bp 1 0.52102739711594 1 0.979965627193451 experiment 0.957945205768119 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453175 stopgain 0.973 0 hm6A_associated_SNPs_38453 0 0 1 4 9453169 9453193 mRNA hsa-miR-181b ZNF559 miRanda miRanda
14034 chr19 9453175 9453175 1 + G T GBM 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGATAAAAGCCT < 41bp 1 0.52102739711594 1 0.979965627193451 experiment 0.957945205768119 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453175 stopgain 0.973 0 hm6A_associated_SNPs_38453 0 0 1 4 9453172 9453193 mRNA hsa-miR-181c ZNF559 miRanda miRanda
14034 chr19 9453175 9453175 1 + G T GBM 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGATAAAAGCCT < 41bp 1 0.52102739711594 1 0.979965627193451 experiment 0.957945205768119 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453175 stopgain 0.973 0 hm6A_associated_SNPs_38453 0 0 1 4 9453165 9453193 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr17 56780576 56780576 1 + G T GBM 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGATGA < 41bp 1 0.571624875435852 1 0.0692704617977142 experiment 0.856750249128297 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780576 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_38475 0 0 1 3 56780563 56780584 mRNA hsa-miR-203 RAD51C miRanda miRanda
14034 chr17 56780576 56780576 1 + G T GBM 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGATGA < 41bp 1 0.571624875435852 1 0.0692704617977142 experiment 0.856750249128297 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780576 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_38475 0 0 1 3 56780573 56780593 mRNA hsa-miR-340 RAD51C miRanda miRanda
14034 chr17 56780576 56780576 1 + G T GBM 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGATGA < 41bp 1 0.571624875435852 1 0.0692704617977142 experiment 0.856750249128297 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780576 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_38475 0 0 1 3 56780568 56780590 mRNA hsa-miR-335 RAD51C miRanda miRanda
14034 chr9 139983433 139983433 1 + G T GBM 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGATAACTTACCTGAGATTTCGTCAC < 41bp 1 0.639679546972081 1 0.604500293731689 experiment 0.720640906055839 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983433 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_38479 0 0 1 2 139983419 139983443 mRNA hsa-miR-196a MAN1B1 miRanda miRanda
14034 chr9 139983433 139983433 1 + G T GBM 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGATAACTTACCTGAGATTTCGTCAC < 41bp 1 0.639679546972081 1 0.604500293731689 experiment 0.720640906055839 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983433 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_38479 0 0 1 2 139983428 139983449 mRNA hsa-miR-216a MAN1B1 miRanda miRanda
14034 chr19 9453601 9453601 1 + C T GBM 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGTCC < 41bp 1 0.352604480849041 1 0.977946877479553 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453601 nonsynonymous SNV 0.081 2 hm6A_associated_SNPs_38526 0 0 1 4 9453592 9453613 mRNA hsa-miR-181a ZNF559 miRanda miRanda
14034 chr19 9453601 9453601 1 + C T GBM 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGTCC < 41bp 1 0.352604480849041 1 0.977946877479553 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453601 nonsynonymous SNV 0.081 2 hm6A_associated_SNPs_38526 0 0 1 4 9453592 9453613 mRNA hsa-miR-181b ZNF559 miRanda miRanda
14034 chr19 9453601 9453601 1 + C T GBM 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGTCC < 41bp 1 0.352604480849041 1 0.977946877479553 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453601 nonsynonymous SNV 0.081 2 hm6A_associated_SNPs_38526 0 0 1 4 9453592 9453613 mRNA hsa-miR-181c ZNF559 miRanda miRanda
14034 chr19 9453601 9453601 1 + C T GBM 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGTCC < 41bp 1 0.352604480849041 1 0.977946877479553 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453601 nonsynonymous SNV 0.081 2 hm6A_associated_SNPs_38526 0 0 1 4 9453585 9453613 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr1 25140603 25140603 1 + G A GBM 25140605 + 25140585 25140625 41 GAAGCCAGCAGACCTGCAGAACTTGGCTCCCGGGACCCACC GAAGCCAGCAGACCTGCAAAACTTGGCTCCCGGGACCCACC < 41bp 1 0.26925691893153 1 0.706782221794128 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 CLIC4 ENSG00000169504 CDS Human protein_coding chr1:25140605 chr1:25140603 synonymous SNV . 0 hm6A_associated_SNPs_38547 0 0 1 1 25140586 25140606 mRNA hsa-miR-544 CLIC4 miRanda miRanda
14034 chr1 25140603 25140603 1 + G A GBM 25140619 + 25140599 25140639 41 TGCAGAACTTGGCTCCCGGGACCCACCCACCATTTATAACT TGCAAAACTTGGCTCCCGGGACCCACCCACCATTTATAACT < 41bp 1 0.151648304280461 1 0.397942990064621 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 CLIC4 ENSG00000169504 CDS Human protein_coding chr1:25140619 chr1:25140603 synonymous SNV . 0 hm6A_associated_SNPs_38548 0 0 1 1 25140586 25140606 mRNA hsa-miR-544 CLIC4 miRanda miRanda
14034 chr17 33592900 33592900 1 + C T GBM 33592907 + 33592887 33592927 41 ATTCTGAAGGCTTCTGTGTGACAGGAAACCCAAGCCTAAGA ATTCTGAAGGCTTTTGTGTGACAGGAAACCCAAGCCTAAGA < 41bp 1 0.753150414836055 1 0.671555399894714 experiment 0.493699170327889 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 SLFN5 ENSG00000166750 CDS Human protein_coding chr17:33592907 chr17:33592900 nonsynonymous SNV 0.004 1 hm6A_associated_SNPs_38575 0 0 0 1 33592889 33592908 mRNA hsa-miR-377 SLFN5 miRanda miRanda
14034 chr5 134120204 134120204 1 + T G GBM 134120185 + 134120165 134120205 41 TTTCTGTTGCCCATGTTTAGACACATCATGGATCAGAGGTC TTTCTGTTGCCCATGTTTAGACACATCATGGATCAGAGGGC < 41bp 1 0.621466650838058 1 0.588990032672882 experiment 0.757066698323885 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134120185 chr5:134120204 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38623 0 0 1 1 134120186 134120208 mRNA hsa-miR-875-5p DDX46 miRanda miRanda
14034 chr3 52525480 52525480 1 + G A GBM 52525491 + 52525471 52525511 41 GCCCTCGCCGGAGCCTGTTGACAAGGACTTCTACTCCGAGT GCCCTCGCCAGAGCCTGTTGACAAGGACTTCTACTCCGAGT < 41bp 1 0.678626727726 1 0.950331091880798 experiment 0.642746544548 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 NISCH ENSG00000010322 CDS Human protein_coding chr3:52525491 chr3:52525480 synonymous SNV . 0 hm6A_associated_SNPs_38727 0 0 1 2 52525472 52525493 mRNA hsa-miR-505 NISCH miRanda miRanda
14034 chr3 52525480 52525480 1 + G A GBM 52525491 + 52525471 52525511 41 GCCCTCGCCGGAGCCTGTTGACAAGGACTTCTACTCCGAGT GCCCTCGCCAGAGCCTGTTGACAAGGACTTCTACTCCGAGT < 41bp 1 0.678626727726 1 0.950331091880798 experiment 0.642746544548 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 NISCH ENSG00000010322 CDS Human protein_coding chr3:52525491 chr3:52525480 synonymous SNV . 0 hm6A_associated_SNPs_38727 0 0 1 2 52525470 52525492 mRNA hsa-miR-421 NISCH miRanda miRanda
14034 chr9 98643481 98643481 1 + A G GBM 98643495 + 98643475 98643515 41 GAGACTACCAAAGAGAAGGAACCCGGTTTCTTTATGGACAC GAGACTGCCAAAGAGAAGGAACCCGGTTTCTTTATGGACAC < 41bp 1 0.759095067889392 1 0.967280387878418 experiment 0.481809864221216 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98643495 chr9:98643481 nonsynonymous SNV 0.998 5 hm6A_associated_SNPs_38757 0 0 1 1 98643466 98643488 mRNA hsa-miR-9 C9orf102 miRanda miRanda
14034 chr2 170865402 170865402 1 + C T GBM 170865417 + 170865397 170865437 41 CAAGACCCCGGGCTCACCAGACAATGATTTTCTCTTTATGT CAAGATCCCGGGCTCACCAGACAATGATTTTCTCTTTATGT < 41bp 1 0.720386348394253 1 0.0972022116184235 experiment 0.559227303211494 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170865417 chr2:170865402 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_38771 0 0 1 1 170865381 170865403 mRNA hsa-miR-431 UBR3 miRanda miRanda
14034 chr1 150484131 150484131 1 + G A GBM 150484144 + 150484124 150484164 41 TCCTGGGGTGCCCACATTGGACAATATCAAGAACATCTGCC TCCTGGGATGCCCACATTGGACAATATCAAGAACATCTGCC < 41bp 1 0.719578425893897 1 0.97274374961853 experiment 0.560843148212207 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484144 chr1:150484131 nonsynonymous SNV 0.942 0 hm6A_associated_SNPs_38792 0 0 1 2 150484120 150484141 mRNA hsa-miR-299-3p ECM1 miRanda miRanda
14034 chr1 150484131 150484131 1 + G A GBM 150484144 + 150484124 150484164 41 TCCTGGGGTGCCCACATTGGACAATATCAAGAACATCTGCC TCCTGGGATGCCCACATTGGACAATATCAAGAACATCTGCC < 41bp 1 0.719578425893897 1 0.97274374961853 experiment 0.560843148212207 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 8 ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484144 chr1:150484131 nonsynonymous SNV 0.942 0 hm6A_associated_SNPs_38792 0 0 1 2 150484131 150484152 mRNA hsa-miR-190b ECM1 miRanda miRanda
14034 chr3 10108908 10108908 1 + T C GBM 10108917 + 10108897 10108937 41 TAAATGCCTTCTGCCAGGAAACATCACCTGAGATGAAGGGG TAAATGCCTTCCGCCAGGAAACATCACCTGAGATGAAGGGG < 41bp 1 0.473782077059233 1 0.00623098015785217 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 12 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10108917 chr3:10108908 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_38818 0 0 1 1 10108905 10108927 mRNA hsa-miR-125a-3p FANCD2 miRanda miRanda
14034 chr11 65271806 65271806 1 + A G GBM 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTACAGACTTCACAGGGAATGCAGTTG < 41bp 1 0.319806266140237 1 0.169576436281204 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 30 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271806 . . 0 hm6A_associated_SNPs_38824 0 0 1 2 65271794 65271816 lncRNA hsa-miR-217 MALAT1 miRanda starBase2
14034 chr11 65271806 65271806 1 + A G GBM 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTACAGACTTCACAGGGAATGCAGTTG < 41bp 1 0.319806266140237 1 0.169576436281204 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 30 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271806 . . 0 hm6A_associated_SNPs_38824 0 0 1 2 65271793 65271816 lncRNA hsa-miR-6807-3p MALAT1 miRanda starBase2
14034 chr5 96101025 96101025 1 + T A GBM 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGAAAA < 41bp 1 0.149319422398639 1 0.885230898857117 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101025 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_38848 0 0 1 2 96101010 96101029 mRNA hsa-miR-211 CAST miRanda miRanda
14034 chr5 96101025 96101025 1 + T A GBM 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGAAAA < 41bp 1 0.149319422398639 1 0.885230898857117 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101025 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_38848 0 0 1 2 96101009 96101029 mRNA hsa-miR-486-5p CAST miRanda miRanda
14034 chr10 38654417 38654417 1 + G A GBM 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTAGACATCATCTCGCAATGCAAGG < 41bp 1 0.291911141594296 1 0.864481329917908 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 19 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654417 . . 0 hm6A_associated_SNPs_38862 0 0 1 2 38654417 38654437 mRNA hsa-miR-33a HSD17B7P2 miRanda miRanda
14034 chr10 38654417 38654417 1 + G A GBM 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTAGACATCATCTCGCAATGCAAGG < 41bp 1 0.291911141594296 1 0.864481329917908 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 19 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654417 . . 0 hm6A_associated_SNPs_38862 0 0 1 2 38654407 38654429 mRNA hsa-miR-143 HSD17B7P2 miRanda miRanda
14034 chr14 105453174 105453174 1 + G A GBM 105453168 + 105453148 105453188 41 GTGGACCTTGGGTGACAGGAACTTCTGCCGTCCCACCTTCT GTGGACCTTGGGTGACAGGAACTTCTACCGTCCCACCTTCT < 41bp 1 0.684428830410522 1 0.969144225120544 experiment 0.631142339178955 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 27 C14orf79 ENSG00000140104 CDS Human protein_coding chr14:105453168 chr14:105453174 nonsynonymous SNV 0.092 0 hm6A_associated_SNPs_38863 0 0 1 1 105453159 105453181 mRNA hsa-miR-184 C14orf79 miRanda miRanda
14034 chr10 38654418 38654418 1 + G A GBM 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGAACATCATCTCGCAATGCAAGG < 41bp 1 0.341795199461089 1 0.876590490341187 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 20 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654418 . . 0 hm6A_associated_SNPs_38865 0 0 1 3 38654417 38654437 mRNA hsa-miR-33a HSD17B7P2 miRanda miRanda
14034 chr10 38654418 38654418 1 + G A GBM 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGAACATCATCTCGCAATGCAAGG < 41bp 1 0.341795199461089 1 0.876590490341187 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 20 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654418 . . 0 hm6A_associated_SNPs_38865 0 0 1 3 38654407 38654429 mRNA hsa-miR-143 HSD17B7P2 miRanda miRanda
14034 chr10 38654418 38654418 1 + G A GBM 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGAACATCATCTCGCAATGCAAGG < 41bp 1 0.341795199461089 1 0.876590490341187 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 20 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654418 . . 0 hm6A_associated_SNPs_38865 0 0 1 3 38654418 38654437 mRNA hsa-miR-33b HSD17B7P2 miRanda miRanda
14034 chr15 25328795 25328795 1 + T A GBM 25328778 + 25328758 25328798 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACACTA < 41bp 1 0.082697865548776 1 0.316573977470398 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 SNORD116-17;SNORD116-19 ENSG00000206656 ncRNA_exonic Human snoRNA chr15:25328778 chr15:25328795 . . 0 hm6A_associated_SNPs_38872 0 0 0 1 25328786 25328806 mRNA hsa-miR-202 SNORD116-17 miRanda miRanda
14034 chr5 134229293 134229293 1 + C T GBM 134229282 + 134229262 134229302 41 CAGTTTGGCCCCTCACTTTAACTCTCTGCCCCGGGCATTTC CAGTTTGGCCCCTCACTTTAACTCTCTGCCCTGGGCATTTC < 41bp 1 0.637824855923353 1 0.0314373672008514 experiment 0.724350288153294 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134229282 chr5:134229293 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_38875 0 0 1 1 134229280 134229301 mRNA hsa-miR-365 TXNDC15 miRanda miRanda
14034 chr19 18278048 18278048 1 + C A GBM 18278062 + 18278042 18278082 41 AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA AGAGATAGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA < 41bp 1 0.687220461981473 1 0.919752836227417 experiment 0.625559076037054 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18278062 chr19:18278048 synonymous SNV . 0 hm6A_associated_SNPs_38898 0 0 1 2 18278036 18278060 mRNA hsa-miR-135a PIK3R2 miRanda miRanda
14034 chr19 18278048 18278048 1 + C A GBM 18278062 + 18278042 18278082 41 AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA AGAGATAGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA < 41bp 1 0.687220461981473 1 0.919752836227417 experiment 0.625559076037054 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18278062 chr19:18278048 synonymous SNV . 0 hm6A_associated_SNPs_38898 0 0 1 2 18278036 18278060 mRNA hsa-miR-135b PIK3R2 miRanda miRanda
14034 chr6 151247267 151247267 1 + G T GBM 151247279 + 151247259 151247299 41 GACATTGAGATTTCAAGAGGACAAACTCCAAAAGCTGTGGA GACATTGATATTTCAAGAGGACAAACTCCAAAAGCTGTGGA < 41bp 1 0.426622315451436 1 0.911839425563812 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151247279 chr6:151247267 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_38921 0 0 1 1 151247258 151247271 mRNA hsa-miR-216a MTHFD1L miRanda miRanda
14034 chr9 32425877 32425877 1 + T A GBM 32425868 + 32425848 32425888 41 GGATTCCAAGTTGCTCCTGAACATCATAATGACCATAAGAC GGATTCCAAGTTGCTCCTGAACATCATAAAGACCATAAGAC < 41bp 1 0.781399785909376 1 0.12005877494812 experiment 0.437200428181248 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 30 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32425868 chr9:32425877 nonsynonymous SNV 0.736 0 hm6A_associated_SNPs_38923 0 0 1 1 32425864 32425887 mRNA hsa-miR-9 ACO1 miRanda miRanda
14034 chrX 73046727 73046727 1 - T C GBM 73046722 - 73046702 73046742 41 GTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAAC GTCTTAAGACCTGGGGCAGGACACATGGAAGGCCTAAGAAC < 41bp 1 0.745974961731203 1 0.951413869857788 experiment 0.508050076537595 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 16 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046722 chrX:73046727 . . 0 hm6A_associated_SNPs_38974 0 0 1 2 73046707 73046727 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046727 73046727 1 - T C GBM 73046722 - 73046702 73046742 41 GTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAAC GTCTTAAGACCTGGGGCAGGACACATGGAAGGCCTAAGAAC < 41bp 1 0.745974961731203 1 0.951413869857788 experiment 0.508050076537595 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 16 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046722 chrX:73046727 . . 0 hm6A_associated_SNPs_38974 0 0 1 2 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046727 73046727 1 - T C GBM 73046734 - 73046714 73046754 41 CTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGA CTTGAGTTAGAAGTCTTAAGACCTGGGGCAGGACACATGGA < 41bp 1 0.276323983214381 1 0.788263857364655 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046734 chrX:73046727 . . 0 hm6A_associated_SNPs_38975 0 0 1 2 73046707 73046727 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046727 73046727 1 - T C GBM 73046734 - 73046714 73046754 41 CTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGA CTTGAGTTAGAAGTCTTAAGACCTGGGGCAGGACACATGGA < 41bp 1 0.276323983214381 1 0.788263857364655 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046734 chrX:73046727 . . 0 hm6A_associated_SNPs_38975 0 0 1 2 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047745 96047765 mRNA hsa-miR-27a C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047729 96047749 mRNA hsa-miR-27a C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047748 96047769 mRNA hsa-miR-32 C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047743 96047763 mRNA hsa-miR-101 C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047745 96047765 mRNA hsa-miR-27b C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047729 96047749 mRNA hsa-miR-27b C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047744 96047764 mRNA hsa-miR-128 C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047744 96047763 mRNA hsa-miR-144 C8orf38 miRanda miRanda
14034 chr8 96047748 96047748 1 + G A GBM 96047764 + 96047744 96047784 41 TGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTG TGTGAAAGATATATACTGTGACAATCCACCACATCAGCCTG < 41bp 1 0.720702910836549 1 0.880113244056702 experiment 0.558594178326903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047764 chr8:96047748 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_38984 0 0 0 9 96047747 96047769 mRNA hsa-miR-363 C8orf38 miRanda miRanda
14034 chr3 33339184 33339184 1 + T C GBM 33339166 + 33339146 33339186 41 TTCTTTCCAGGTTTTCTCAAACAATGATGAAGGCCTTATTA TTCTTTCCAGGTTTTCTCAAACAATGATGAAGGCCTTACTA < 41bp 1 0.65742991552419 1 0.563403129577637 experiment 0.685140168951621 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 FBXL2 ENSG00000153558 CDS Human protein_coding chr3:33339166 chr3:33339184 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_39021 0 0 0 2 33339173 33339194 mRNA hsa-miR-129-5p FBXL2 miRanda miRanda
14034 chr3 33339184 33339184 1 + T C GBM 33339166 + 33339146 33339186 41 TTCTTTCCAGGTTTTCTCAAACAATGATGAAGGCCTTATTA TTCTTTCCAGGTTTTCTCAAACAATGATGAAGGCCTTACTA < 41bp 1 0.65742991552419 1 0.563403129577637 experiment 0.685140168951621 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 FBXL2 ENSG00000153558 CDS Human protein_coding chr3:33339166 chr3:33339184 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_39021 0 0 0 2 33339183 33339205 mRNA hsa-miR-9 FBXL2 miRanda miRanda
14034 chr16 85954876 85954876 1 + G A GBM 85954869 + 85954849 85954889 41 GAGATCATTTTTCAGAGAAAACCAACAGATCACCGTCTAAG GAGATCATTTTTCAGAGAAAACCAACAAATCACCGTCTAAG < 41bp 1 0.311331589518823 1 0.702184677124023 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 28 IRF8 ENSG00000140968 CDS Human protein_coding chr16:85954869 chr16:85954876 synonymous SNV . 0 hm6A_associated_SNPs_39061 0 0 0 1 85954856 85954877 mRNA hsa-miR-9 IRF8 miRanda miRanda
14034 chr8 48309052 48309052 1 + G A GBM 48309061 + 48309041 48309081 41 CAGTTTGCATCGGATGCAAGACAGATTATGGAGAGACTGAT CAGTTTGCATCAGATGCAAGACAGATTATGGAGAGACTGAT < 41bp 1 0.327237610316036 1 0.991527676582336 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48309061 chr8:48309052 synonymous SNV . 0 hm6A_associated_SNPs_39092 0 0 1 1 48309046 48309063 mRNA hsa-miR-431 KIAA0146 miRanda miRanda
14034 chr20 29625952 29625952 1 + C A GBM 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGGAACAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.642551170365911 1 0.528694927692413 experiment 0.714897659268177 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625952 nonsynonymous SNV 0.964 1 hm6A_associated_SNPs_39104 0 0 0 2 29625935 29625956 mRNA hsa-miR-133a FRG1B miRanda miRanda
14034 chr20 29625952 29625952 1 + C A GBM 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGGAACAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.642551170365911 1 0.528694927692413 experiment 0.714897659268177 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625952 nonsynonymous SNV 0.964 1 hm6A_associated_SNPs_39104 0 0 0 2 29625935 29625956 mRNA hsa-miR-133b FRG1B miRanda miRanda
14034 chr12 53895818 53895818 1 + G A GBM 53895833 + 53895813 53895853 41 TGGCCGCCAACCCAGGCAAGACCCCGATCAGCCTTCTGCAG TGGCCACCAACCCAGGCAAGACCCCGATCAGCCTTCTGCAG < 41bp 1 0.222256823346635 1 0.0392409861087799 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53895833 chr12:53895818 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_39106 0 0 1 1 53895815 53895835 mRNA hsa-miR-431 TARBP2 miRanda miRanda
14034 chr11 65272212 65272212 1 + A C GBM 65272213 + 65272193 65272233 41 TGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTG TGGCAAGTGGAAATGTTTACACAGTTCAGTGATCTTTAGTG Direct Loss 1 0.166877776986868 1 0.858862936496735 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272213 chr11:65272212 . . 0 hm6A_associated_SNPs_39107 0 0 1 3 65272197 65272218 lncRNA hsa-miR-452-5p MALAT1 miRanda starBase2
14034 chr11 65272212 65272212 1 + A C GBM 65272213 + 65272193 65272233 41 TGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTG TGGCAAGTGGAAATGTTTACACAGTTCAGTGATCTTTAGTG Direct Loss 1 0.166877776986868 1 0.858862936496735 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272213 chr11:65272212 . . 0 hm6A_associated_SNPs_39107 0 0 1 3 65272197 65272218 lncRNA hsa-miR-4676-3p MALAT1 miRanda starBase2
14034 chr11 65272212 65272212 1 + A C GBM 65272213 + 65272193 65272233 41 TGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTG TGGCAAGTGGAAATGTTTACACAGTTCAGTGATCTTTAGTG Direct Loss 1 0.166877776986868 1 0.858862936496735 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272213 chr11:65272212 . . 0 hm6A_associated_SNPs_39107 0 0 1 3 65272194 65272218 lncRNA hsa-miR-892c-3p MALAT1 miRanda starBase2
14034 chr19 11015687 11015687 1 + G T GBM 11015668 + 11015648 11015688 41 AGTGCTCAGTGTCCCGAGAGACAGAGTGCAGCCGTGTGGGC AGTGCTCAGTGTCCCGAGAGACAGAGTGCAGCCGTGTGGTC < 41bp 1 0.387739647738628 1 0.898345947265625 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 CARM1 ENSG00000142453 CDS Human protein_coding chr19:11015668 chr19:11015687 nonsynonymous SNV 0.974 2 hm6A_associated_SNPs_39126 0 0 1 1 11015685 11015707 mRNA hsa-miR-143 CARM1 miRanda miRanda
14034 chr7 100205103 100205103 1 + C T GBM 100205107 + 100205087 100205127 41 GCCCAAAGCAGTGCCGCCGGACAGGCACCTTGCAGAGCAAC GCCCAAAGCAGTGCCGTCGGACAGGCACCTTGCAGAGCAAC < 41bp 1 0.278897364032334 1 0.582915425300598 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205107 chr7:100205103 synonymous SNV . 0 hm6A_associated_SNPs_39146 0 0 1 2 100205096 100205118 mRNA hsa-miR-18a PCOLCE miRanda miRanda
14034 chr7 100205103 100205103 1 + C T GBM 100205107 + 100205087 100205127 41 GCCCAAAGCAGTGCCGCCGGACAGGCACCTTGCAGAGCAAC GCCCAAAGCAGTGCCGTCGGACAGGCACCTTGCAGAGCAAC < 41bp 1 0.278897364032334 1 0.582915425300598 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205107 chr7:100205103 synonymous SNV . 0 hm6A_associated_SNPs_39146 0 0 1 2 100205096 100205118 mRNA hsa-miR-18b PCOLCE miRanda miRanda
14034 chr4 74283995 74283995 1 + T A GBM 74284011 + 74283991 74284031 41 ACACTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG ACACATTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG < 41bp 1 0.333652143766807 1 0.709025382995605 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 5 ALB ENSG00000163631 CDS Human protein_coding chr4:74284011 chr4:74283995 nonsynonymous SNV 0.977 3 hm6A_associated_SNPs_39171 0 0 1 2 74283973 74283997 mRNA hsa-miR-18a ALB miRanda miRanda
14034 chr4 74283995 74283995 1 + T A GBM 74284011 + 74283991 74284031 41 ACACTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG ACACATTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG < 41bp 1 0.333652143766807 1 0.709025382995605 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 5 ALB ENSG00000163631 CDS Human protein_coding chr4:74284011 chr4:74283995 nonsynonymous SNV 0.977 3 hm6A_associated_SNPs_39171 0 0 1 2 74283973 74283997 mRNA hsa-miR-18b ALB miRanda miRanda
14034 chr2 238004495 238004495 1 + C T GBM 238004475 + 238004455 238004495 41 ACTTTTTTAGGCATATTAGAACAAGGATGGCAAGCTGATTC ACTTTTTTAGGCATATTAGAACAAGGATGGCAAGCTGATTT < 41bp 1 0.634702412299491 1 0.260713517665863 experiment 0.730595175401018 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 COPS8 ENSG00000198612 CDS Human protein_coding chr2:238004475 chr2:238004495 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_39227 0 0 1 1 238004477 238004502 mRNA hsa-miR-491-5p COPS8 miRanda miRanda
14034 chrX 24229156 24229156 1 + A C GBM 24229154 + 24229134 24229174 41 AAAAAAATGCACCAGTGTAGACATTGTGACTTTAAGATTGC AAAAAAATGCACCAGTGTAGACCTTGTGACTTTAAGATTGC < 41bp 1 0.659114710371292 1 0.990389227867126 experiment 0.681770579257416 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 23 ZFX ENSG00000005889 CDS Human protein_coding chrX:24229154 chrX:24229156 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_39250 0 0 1 1 24229147 24229166 mRNA hsa-miR-224 ZFX miRanda miRanda
14034 chrX 24229156 24229156 1 + A C GBM 24229162 + 24229142 24229182 41 GCACCAGTGTAGACATTGTGACTTTAAGATTGCAGATCCAT GCACCAGTGTAGACCTTGTGACTTTAAGATTGCAGATCCAT < 41bp 1 0.785766954891519 1 0.99603807926178 experiment 0.428466090216962 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 ZFX ENSG00000005889 CDS Human protein_coding chrX:24229162 chrX:24229156 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_39251 0 0 1 1 24229147 24229166 mRNA hsa-miR-224 ZFX miRanda miRanda
14034 chr2 190728600 190728600 1 + C T GBM 190728620 + 190728600 190728640 41 CCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCA TCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCA < 41bp 1 0.579611166025997 1 0.943669557571411 experiment 0.840777667948005 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728620 chr2:190728600 nonsynonymous SNV 0.799 1 hm6A_associated_SNPs_39270 0 0 1 1 190728587 190728612 mRNA hsa-miR-218 PMS1 miRanda miRanda
14034 chr10 27459503 27459503 1 + G A HNSC 27459504 + 27459484 27459524 41 TATGTGTGAACTCGATGAAGACTGTGAAAAGAATAGTAAGA TATGTGTGAACTCGATGAAAACTGTGAAAAGAATAGTAAGA < 41bp 1 0.790097250338595 1 0.981519937515259 experiment 0.419805499322809 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 20 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459504 chr10:27459503 nonsynonymous SNV 0.916 3 hm6A_associated_SNPs_39318 0 0 1 2 27459488 27459511 mRNA hsa-miR-27a MASTL miRanda miRanda
14034 chr10 27459503 27459503 1 + G A HNSC 27459504 + 27459484 27459524 41 TATGTGTGAACTCGATGAAGACTGTGAAAAGAATAGTAAGA TATGTGTGAACTCGATGAAAACTGTGAAAAGAATAGTAAGA < 41bp 1 0.790097250338595 1 0.981519937515259 experiment 0.419805499322809 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 20 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459504 chr10:27459503 nonsynonymous SNV 0.916 3 hm6A_associated_SNPs_39318 0 0 1 2 27459488 27459511 mRNA hsa-miR-27b MASTL miRanda miRanda
14034 chr17 28961071 28961071 1 + G C HNSC 28961072 + 28961052 28961092 41 TCATCTTCGCAATATCTGTGACTGTCATACTAATAATTTTG TCATCTTCGCAATATCTGTCACTGTCATACTAATAATTTTG Direct Loss 1 0.295786140150442 1 0.0214156210422516 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961072 chr17:28961071 . . 0 hm6A_associated_SNPs_39330 0 0 1 1 28961062 28961083 mRNA hsa-miR-411 LRRC37B2 miRanda miRanda
14034 chr15 65847227 65847227 1 + C G HNSC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTGAAGGACATGGTGCCAAAGGAGACAA < 41bp 1 0.620282637398618 1 0.160497754812241 experiment 0.759434725202764 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847227 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_39337 0 0 1 6 65847225 65847242 mRNA hsa-miR-29a PTPLAD1 miRanda miRanda
14034 chr15 65847227 65847227 1 + C G HNSC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTGAAGGACATGGTGCCAAAGGAGACAA < 41bp 1 0.620282637398618 1 0.160497754812241 experiment 0.759434725202764 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847227 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_39337 0 0 1 6 65847225 65847244 mRNA hsa-miR-96 PTPLAD1 miRanda miRanda
14034 chr15 65847227 65847227 1 + C G HNSC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTGAAGGACATGGTGCCAAAGGAGACAA < 41bp 1 0.620282637398618 1 0.160497754812241 experiment 0.759434725202764 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847227 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_39337 0 0 1 6 65847225 65847242 mRNA hsa-miR-29b PTPLAD1 miRanda miRanda
14034 chr15 65847227 65847227 1 + C G HNSC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTGAAGGACATGGTGCCAAAGGAGACAA < 41bp 1 0.620282637398618 1 0.160497754812241 experiment 0.759434725202764 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847227 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_39337 0 0 1 6 65847227 65847250 mRNA hsa-miR-211 PTPLAD1 miRanda miRanda
14034 chr15 65847227 65847227 1 + C G HNSC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTGAAGGACATGGTGCCAAAGGAGACAA < 41bp 1 0.620282637398618 1 0.160497754812241 experiment 0.759434725202764 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847227 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_39337 0 0 1 6 65847225 65847242 mRNA hsa-miR-29c PTPLAD1 miRanda miRanda
14034 chr15 65847227 65847227 1 + C G HNSC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTGAAGGACATGGTGCCAAAGGAGACAA < 41bp 1 0.620282637398618 1 0.160497754812241 experiment 0.759434725202764 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847227 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_39337 0 0 1 6 65847225 65847244 mRNA hsa-miR-1271 PTPLAD1 miRanda miRanda
14034 chr1 92789250 92789250 1 + C A HNSC 92789269 + 92789249 92789289 41 TCCAAACACAAAGACAAAGAACAGACAGTAGTAGATGTCAC TACAAACACAAAGACAAAGAACAGACAGTAGTAGATGTCAC < 41bp 1 0.665507243534027 1 0.943832516670227 experiment 0.668985512931947 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92789269 chr1:92789250 nonsynonymous SNV 0.765 0 hm6A_associated_SNPs_39341 0 0 0 1 92789236 92789262 mRNA hsa-miR-9 RPAP2 miRanda miRanda
14034 chr11 125514440 125514440 1 + C T HNSC 125514437 + 125514417 125514457 41 AGCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTG AGCGGTTGGTCAAAAGAATGACATGATTCTTTACCAAATTG < 41bp 1 0.639710207886597 1 0.589768707752228 experiment 0.720579584226805 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514437 chr11:125514440 stopgain 0.997 1 hm6A_associated_SNPs_39410 1 0 1 2 125514418 125514442 mRNA hsa-miR-187 CHEK1 miRanda miRanda
14034 chr11 125514440 125514440 1 + C T HNSC 125514437 + 125514417 125514457 41 AGCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTG AGCGGTTGGTCAAAAGAATGACATGATTCTTTACCAAATTG < 41bp 1 0.639710207886597 1 0.589768707752228 experiment 0.720579584226805 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514437 chr11:125514440 stopgain 0.997 1 hm6A_associated_SNPs_39410 1 0 1 2 125514423 125514449 mRNA hsa-miR-186 CHEK1 miRanda miRanda
14034 chr12 93873224 93873224 1 + G C HNSC 93873239 + 93873219 93873259 41 TCTGTGGACATTCCATATGAACACACAAAAGTATGTATGAG TCTGTCGACATTCCATATGAACACACAAAAGTATGTATGAG < 41bp 1 0.615339051785351 1 0.00368082523345947 experiment 0.769321896429298 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93873239 chr12:93873224 synonymous SNV . 0 hm6A_associated_SNPs_39469 0 0 1 3 93873210 93873233 mRNA hsa-miR-1 MRPL42 miRanda miRanda
14034 chr12 93873224 93873224 1 + G C HNSC 93873239 + 93873219 93873259 41 TCTGTGGACATTCCATATGAACACACAAAAGTATGTATGAG TCTGTCGACATTCCATATGAACACACAAAAGTATGTATGAG < 41bp 1 0.615339051785351 1 0.00368082523345947 experiment 0.769321896429298 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93873239 chr12:93873224 synonymous SNV . 0 hm6A_associated_SNPs_39469 0 0 1 3 93873210 93873233 mRNA hsa-miR-206 MRPL42 miRanda miRanda
14034 chr12 93873224 93873224 1 + G C HNSC 93873239 + 93873219 93873259 41 TCTGTGGACATTCCATATGAACACACAAAAGTATGTATGAG TCTGTCGACATTCCATATGAACACACAAAAGTATGTATGAG < 41bp 1 0.615339051785351 1 0.00368082523345947 experiment 0.769321896429298 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93873239 chr12:93873224 synonymous SNV . 0 hm6A_associated_SNPs_39469 0 0 1 3 93873214 93873233 mRNA hsa-miR-613 MRPL42 miRanda miRanda
14034 chr1 150318543 150318543 1 + G T HNSC 150318561 + 150318541 150318581 41 ATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCAC ATTCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCAC < 41bp 1 0.79547667850689 1 0.759820461273193 experiment 0.40904664298622 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150318561 chr1:150318543 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_39519 0 0 1 2 150318524 150318548 mRNA hsa-miR-338-3p PRPF3 miRanda miRanda
14034 chr1 150318543 150318543 1 + G T HNSC 150318561 + 150318541 150318581 41 ATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCAC ATTCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCAC < 41bp 1 0.79547667850689 1 0.759820461273193 experiment 0.40904664298622 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150318561 chr1:150318543 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_39519 0 0 1 2 150318543 150318567 mRNA hsa-miR-339-5p PRPF3 miRanda miRanda
14034 chr11 65267841 65267841 1 + G A HNSC 65267843 + 65267823 65267863 41 TTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTG TTATTTTTTAAATCCTGAAGACTAGCATTAATTGACAGCTG < 41bp 1 0.106097653193916 1 0.931742310523987 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267843 chr11:65267841 . . 0 hm6A_associated_SNPs_39529 0 0 1 2 65267833 65267853 lncRNA hsa-miR-155-5p MALAT1 miRanda starBase2
14034 chr11 65267841 65267841 1 + G A HNSC 65267843 + 65267823 65267863 41 TTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTG TTATTTTTTAAATCCTGAAGACTAGCATTAATTGACAGCTG < 41bp 1 0.106097653193916 1 0.931742310523987 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267843 chr11:65267841 . . 0 hm6A_associated_SNPs_39529 0 0 1 2 65267823 65267851 lncRNA hsa-miR-3146 MALAT1 miRanda starBase2
14034 chr11 65267841 65267841 1 + G A HNSC 65267857 + 65267837 65267877 41 CTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA CTGAAGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA < 41bp 1 0.0995173017383374 1 0.921324908733368 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267857 chr11:65267841 . . 0 hm6A_associated_SNPs_39530 0 0 1 2 65267833 65267853 lncRNA hsa-miR-155-5p MALAT1 miRanda starBase2
14034 chr11 65267841 65267841 1 + G A HNSC 65267857 + 65267837 65267877 41 CTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA CTGAAGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA < 41bp 1 0.0995173017383374 1 0.921324908733368 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267857 chr11:65267841 . . 0 hm6A_associated_SNPs_39530 0 0 1 2 65267823 65267851 lncRNA hsa-miR-3146 MALAT1 miRanda starBase2
14034 chr19 50185211 50185211 1 + C T HNSC 50185222 + 50185202 50185242 41 CCGCAACTCCATGTTTCATAACCGGCACCTCTTCAAGGACA CCGCAACTCTATGTTTCATAACCGGCACCTCTTCAAGGACA < 41bp 1 0.291781168957786 1 0.206854820251465 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50185222 chr19:50185211 synonymous SNV . 0 hm6A_associated_SNPs_39543 0 0 1 1 50185198 50185219 mRNA hsa-miR-494 PRMT1 miRanda miRanda
14034 chr4 128627931 128627931 1 + G A HNSC 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAAAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA < 41bp 1 0.61416290833778 1 0.886460363864899 experiment 0.771674183324441 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627931 nonsynonymous SNV 0.911 1 hm6A_associated_SNPs_39569 0 0 1 1 128627913 128627934 mRNA hsa-miR-544 INTU miRanda miRanda
14034 chr21 46596022 46596022 1 + G A HNSC 46596009 + 46595989 46596029 41 CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGC CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTAAGAAGGC < 41bp 1 0.705533444383545 1 0.965109348297119 experiment 0.58893311123291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596009 chr21:46596022 nonsynonymous SNV 0.942 3 hm6A_associated_SNPs_39571 0 0 0 6 46596003 46596022 mRNA hsa-miR-15a ADARB1 miRanda miRanda
14034 chr21 46596022 46596022 1 + G A HNSC 46596009 + 46595989 46596029 41 CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGC CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTAAGAAGGC < 41bp 1 0.705533444383545 1 0.965109348297119 experiment 0.58893311123291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596009 chr21:46596022 nonsynonymous SNV 0.942 3 hm6A_associated_SNPs_39571 0 0 0 6 46596002 46596022 mRNA hsa-miR-16 ADARB1 miRanda miRanda
14034 chr21 46596022 46596022 1 + G A HNSC 46596009 + 46595989 46596029 41 CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGC CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTAAGAAGGC < 41bp 1 0.705533444383545 1 0.965109348297119 experiment 0.58893311123291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596009 chr21:46596022 nonsynonymous SNV 0.942 3 hm6A_associated_SNPs_39571 0 0 0 6 46596001 46596022 mRNA hsa-miR-15b ADARB1 miRanda miRanda
14034 chr21 46596022 46596022 1 + G A HNSC 46596009 + 46595989 46596029 41 CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGC CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTAAGAAGGC < 41bp 1 0.705533444383545 1 0.965109348297119 experiment 0.58893311123291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596009 chr21:46596022 nonsynonymous SNV 0.942 3 hm6A_associated_SNPs_39571 0 0 0 6 46596003 46596022 mRNA hsa-miR-195 ADARB1 miRanda miRanda
14034 chr21 46596022 46596022 1 + G A HNSC 46596009 + 46595989 46596029 41 CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGC CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTAAGAAGGC < 41bp 1 0.705533444383545 1 0.965109348297119 experiment 0.58893311123291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596009 chr21:46596022 nonsynonymous SNV 0.942 3 hm6A_associated_SNPs_39571 0 0 0 6 46596003 46596022 mRNA hsa-miR-424 ADARB1 miRanda miRanda
14034 chr21 46596022 46596022 1 + G A HNSC 46596009 + 46595989 46596029 41 CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGC CCCACAAAGAAAAAGGCAAAACTCCATGCTGCTAAGAAGGC < 41bp 1 0.705533444383545 1 0.965109348297119 experiment 0.58893311123291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596009 chr21:46596022 nonsynonymous SNV 0.942 3 hm6A_associated_SNPs_39571 0 0 0 6 46596005 46596022 mRNA hsa-miR-497 ADARB1 miRanda miRanda
14034 chr14 62213681 62213681 1 + A G HNSC 62213665 + 62213645 62213685 41 TTTTCAGATTTAGCATGTAGACTGCTGGGGCAATCAATGGA TTTTCAGATTTAGCATGTAGACTGCTGGGGCAATCAGTGGA < 41bp 1 0.554375666850327 1 0.13066890835762 experiment 0.891248666299347 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 HIF1A ENSG00000100644 CDS Human protein_coding chr14:62213665 chr14:62213681 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_39578 0 0 1 2 62213676 62213696 mRNA hsa-miR-204 HIF1A miRanda miRanda
14034 chr14 62213681 62213681 1 + A G HNSC 62213665 + 62213645 62213685 41 TTTTCAGATTTAGCATGTAGACTGCTGGGGCAATCAATGGA TTTTCAGATTTAGCATGTAGACTGCTGGGGCAATCAGTGGA < 41bp 1 0.554375666850327 1 0.13066890835762 experiment 0.891248666299347 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 HIF1A ENSG00000100644 CDS Human protein_coding chr14:62213665 chr14:62213681 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_39578 0 0 1 2 62213676 62213696 mRNA hsa-miR-211 HIF1A miRanda miRanda
14034 chr11 65266592 65266592 1 + T A HNSC 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTATCT < 41bp 1 0.0453412251640308 1 0.538178682327271 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 38 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266592 . . 0 hm6A_associated_SNPs_39593 0 0 1 1 65266592 65266614 lncRNA hsa-miR-216b-5p MALAT1 miRanda starBase2
14034 chr14 105920571 105920571 1 + G A HNSC 105920572 + 105920552 105920592 41 TCTACGACCCACAGCAGAAGACCCTGCTGGCAGATAAAGGA TCTACGACCCACAGCAGAAAACCCTGCTGGCAGATAAAGGA < 41bp 1 0.163227589478941 1 0.0663366913795471 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 MTA1 ENSG00000182979 CDS Human protein_coding chr14:105920572 chr14:105920571 synonymous SNV . 0 hm6A_associated_SNPs_39597 0 0 1 1 105920560 105920581 mRNA hsa-miR-214 MTA1 miRanda miRanda
14034 chr6 4044117 4044117 1 + C T HNSC 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT GCCCCCAGAGCAGTATGAGAACACGATCACCATCTCCAGAT < 41bp 1 0.69890553839997 1 0.845794856548309 experiment 0.602188923200059 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044117 nonsynonymous SNV 0.854 4 hm6A_associated_SNPs_39628 0 0 1 1 4044105 4044127 mRNA hsa-miR-187 PRPF4B miRanda miRanda
14034 chrX 23803928 23803928 1 + C A HNSC 23803922 + 23803902 23803942 41 TCCAGTGAAGAGGGTTGGAGACTGTTCAAGATCGACAAGGA TCCAGTGAAGAGGGTTGGAGACTGTTAAAGATCGACAAGGA < 41bp 1 0.795658047461452 1 0.972257196903229 experiment 0.408683905077096 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803922 chrX:23803928 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_39635 0 0 1 2 23803908 23803928 mRNA hsa-miR-212 SAT1 miRanda miRanda
14034 chrX 23803928 23803928 1 + C A HNSC 23803922 + 23803902 23803942 41 TCCAGTGAAGAGGGTTGGAGACTGTTCAAGATCGACAAGGA TCCAGTGAAGAGGGTTGGAGACTGTTAAAGATCGACAAGGA < 41bp 1 0.795658047461452 1 0.972257196903229 experiment 0.408683905077096 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803922 chrX:23803928 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_39635 0 0 1 2 23803907 23803928 mRNA hsa-miR-132 SAT1 miRanda miRanda
14034 chr11 65268685 65268685 1 + A G HNSC 65268670 + 65268650 65268690 41 ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTT ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGGGTTTT < 41bp 1 0.0733069214817621 1 0.817080080509186 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268670 chr11:65268685 . . 0 hm6A_associated_SNPs_39638 0 0 1 3 65268677 65268698 lncRNA hsa-miR-200b-3p MALAT1 miRanda starBase2
14034 chr11 65268685 65268685 1 + A G HNSC 65268670 + 65268650 65268690 41 ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTT ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGGGTTTT < 41bp 1 0.0733069214817621 1 0.817080080509186 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268670 chr11:65268685 . . 0 hm6A_associated_SNPs_39638 0 0 1 3 65268676 65268698 lncRNA hsa-miR-200c-3p MALAT1 miRanda starBase2
14034 chr11 65268685 65268685 1 + A G HNSC 65268670 + 65268650 65268690 41 ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTT ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGGGTTTT < 41bp 1 0.0733069214817621 1 0.817080080509186 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268670 chr11:65268685 . . 0 hm6A_associated_SNPs_39638 0 0 1 3 65268677 65268698 lncRNA hsa-miR-429 MALAT1 miRanda starBase2
14034 chr20 25405913 25405913 1 + G A HNSC 25405920 + 25405900 25405940 41 GGGAGGAGATGAAGGTTTGGACATTACACAGGATATGAAAC GGGAGGAGATGAAAGTTTGGACATTACACAGGATATGAAAC < 41bp 1 0.758052756095983 1 0.882390022277832 experiment 0.483894487808034 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 GINS1 ENSG00000101003 CDS Human protein_coding chr20:25405920 chr20:25405913 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_39672 0 0 1 1 25405894 25405915 mRNA hsa-miR-205 GINS1 miRanda miRanda
14034 chr5 175772396 175772396 1 + C T HNSC 175772399 + 175772379 175772419 41 CCTGCTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGC CCTGCTCTTCTATGCTGTGGACTTGAACCCTGATGCAGAGC < 41bp 1 0.771271194390837 1 0.997817754745483 experiment 0.457457611218327 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175772399 chr5:175772396 nonsynonymous SNV 0.138 1 hm6A_associated_SNPs_39805 0 0 1 2 175772371 175772397 mRNA hsa-miR-103 C5orf25 miRanda miRanda
14034 chr5 175772396 175772396 1 + C T HNSC 175772399 + 175772379 175772419 41 CCTGCTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGC CCTGCTCTTCTATGCTGTGGACTTGAACCCTGATGCAGAGC < 41bp 1 0.771271194390837 1 0.997817754745483 experiment 0.457457611218327 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175772399 chr5:175772396 nonsynonymous SNV 0.138 1 hm6A_associated_SNPs_39805 0 0 1 2 175772371 175772397 mRNA hsa-miR-107 C5orf25 miRanda miRanda
14034 chr10 70706381 70706381 1 + G C HNSC 70706382 + 70706362 70706402 41 GGGCCACAAACGGAGTTTTGACTGAGTATTTGATAGTTAAT GGGCCACAAACGGAGTTTTCACTGAGTATTTGATAGTTAAT Direct Loss 1 0.571706252762924 1 0.946178436279297 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 20 DDX50 ENSG00000107625 CDS Human protein_coding chr10:70706382 chr10:70706381 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_39827 0 0 1 1 70706371 70706392 mRNA hsa-miR-216a DDX50 miRanda miRanda
14034 chr1 40525772 40525772 1 + C T HNSC 40525769 + 40525749 40525789 41 TCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGTCCTG TCCATATGTGCAGGCATTTGACTTGCTGCTTGCTGGTCCTG < 41bp 1 0.302235312744304 1 0.283595979213715 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525769 chr1:40525772 nonsynonymous SNV 0.949 0 hm6A_associated_SNPs_39831 0 0 1 1 40525756 40525779 mRNA hsa-miR-503 CAP1 miRanda miRanda
14034 chr5 76332480 76332480 1 + G C HNSC 76332477 + 76332457 76332497 41 CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATGAA CAGAAGCGGCTGTATCACAGACTCGATTTAGTTATGATGAA < 41bp 1 0.504483531065809 1 0.935779452323914 experiment 0.991032937868382 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 24 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332477 chr5:76332480 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_39837 0 0 1 1 76332461 76332483 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr1 206760287 206760287 1 + G C HNSC 206760268 + 206760248 206760288 41 TATGACAAGTTTAGGCAGAAACTGGAGGAGGCCTTAAGAGA TATGACAAGTTTAGGCAGAAACTGGAGGAGGCCTTAAGACA < 41bp 1 0.528435553137859 1 0.972422003746033 experiment 0.943128893724283 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 RASSF5 ENSG00000136653 CDS Human other chr1:206760268 chr1:206760287 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_39852 0 0 0 1 206760279 206760300 mRNA hsa-miR-874 RASSF5 miRanda miRanda
14034 chr1 206760287 206760287 1 + G C HNSC 206760301 + 206760281 206760321 41 TTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT TTAAGACAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT < 41bp 1 0.209669822378045 1 0.924188017845154 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 RASSF5 ENSG00000136653 CDS Human other chr1:206760301 chr1:206760287 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_39853 0 0 0 1 206760279 206760300 mRNA hsa-miR-874 RASSF5 miRanda miRanda
14034 chr5 72798854 72798854 1 + G C HNSC 72798843 + 72798823 72798863 41 CCATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATG CCATTACAGGCCATGCTGAGACAAAGCAGCTCACAGAAATG < 41bp 1 0.787017330770625 1 0.882364392280579 experiment 0.425965338458751 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798843 chr5:72798854 synonymous SNV . 0 hm6A_associated_SNPs_39867 0 0 1 1 72798853 72798878 mRNA hsa-miR-372 BTF3 miRanda miRanda
14034 chr1 10328246 10328246 1 + C T HNSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGTCGTTCCCACGCT < 41bp 1 0.487944243750516 1 0.023131936788559 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328246 synonymous SNV . 0 hm6A_associated_SNPs_39880 0 0 1 3 10328245 10328267 mRNA hsa-miR-30c KIF1B miRanda miRanda
14034 chr1 10328246 10328246 1 + C T HNSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGTCGTTCCCACGCT < 41bp 1 0.487944243750516 1 0.023131936788559 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328246 synonymous SNV . 0 hm6A_associated_SNPs_39880 0 0 1 3 10328246 10328267 mRNA hsa-miR-30b KIF1B miRanda miRanda
14034 chr1 10328246 10328246 1 + C T HNSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGTCGTTCCCACGCT < 41bp 1 0.487944243750516 1 0.023131936788559 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328246 synonymous SNV . 0 hm6A_associated_SNPs_39880 0 0 1 3 10328246 10328267 mRNA hsa-miR-30e KIF1B miRanda miRanda
14034 chr11 65271805 65271805 1 + G C HNSC 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTACAGACTTCACACAGAATGCAGTTG < 41bp 1 0.30856163064078 1 0.280152469873428 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271805 . . 0 hm6A_associated_SNPs_39890 0 0 1 3 65271794 65271816 lncRNA hsa-miR-217 MALAT1 miRanda starBase2
14034 chr11 65271805 65271805 1 + G C HNSC 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTACAGACTTCACACAGAATGCAGTTG < 41bp 1 0.30856163064078 1 0.280152469873428 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271805 . . 0 hm6A_associated_SNPs_39890 0 0 1 3 65271793 65271816 lncRNA hsa-miR-6807-3p MALAT1 miRanda starBase2
14034 chr11 65271805 65271805 1 + G C HNSC 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTACAGACTTCACACAGAATGCAGTTG < 41bp 1 0.30856163064078 1 0.280152469873428 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271805 . . 0 hm6A_associated_SNPs_39890 0 0 1 3 65271780 65271805 lncRNA hsa-miR-3611 MALAT1 miRanda starBase2
14034 chr11 65272327 65272327 1 + G A HNSC 65272335 + 65272315 65272355 41 CGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCC CGAAGGGCCAGAAAAGCCAGACCCAGTAAGAAAAAATAGCC < 41bp 1 0.0168828539551197 1 0.480948656797409 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272335 chr11:65272327 . . 0 hm6A_associated_SNPs_39894 0 0 1 1 65272309 65272331 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr11 65273081 65273081 1 + G A HNSC 65273062 + 65273042 65273082 41 TGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA TGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCAA < 41bp 1 0.295176473191622 1 0.845482707023621 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273062 chr11:65273081 . . 0 hm6A_associated_SNPs_39901 0 0 1 2 65273070 65273092 lncRNA hsa-miR-3064-5p MALAT1 miRanda starBase2
14034 chr11 65273081 65273081 1 + G A HNSC 65273062 + 65273042 65273082 41 TGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA TGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCAA < 41bp 1 0.295176473191622 1 0.845482707023621 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273062 chr11:65273081 . . 0 hm6A_associated_SNPs_39901 0 0 1 2 65273072 65273092 lncRNA hsa-miR-6504-5p MALAT1 miRanda starBase2
14034 chr17 61628097 61628097 1 + A G HNSC 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTGCGCGATGAACTGGAGTGTGCGGCCCGATA < 41bp 1 0.600150060189917 1 0.997647225856781 experiment 0.799699879620165 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628097 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_39960 0 0 1 2 61628088 61628112 mRNA hsa-miR-145 DCAF7 miRanda miRanda
14034 chr17 61628097 61628097 1 + A G HNSC 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTGCGCGATGAACTGGAGTGTGCGGCCCGATA < 41bp 1 0.600150060189917 1 0.997647225856781 experiment 0.799699879620165 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628097 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_39960 0 0 1 2 61628090 61628113 mRNA hsa-miR-136 DCAF7 miRanda miRanda
14034 chr12 104705131 104705131 1 + T C HNSC 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCAAGCCCTATGACTATGACCTTATCATCATTG < 41bp 1 0.508201553574369 1 0.908514142036438 experiment 0.983596892851262 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705131 nonsynonymous SNV 0.268 0 hm6A_associated_SNPs_39971 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705131 104705131 1 + T C HNSC 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCAAGCCCTATGACTATGACCTTATCATCATTG < 41bp 1 0.508201553574369 1 0.908514142036438 experiment 0.983596892851262 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705131 nonsynonymous SNV 0.268 0 hm6A_associated_SNPs_39971 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr12 104705131 104705131 1 + T C HNSC 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCAAGCCCTATGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.282281651923904 1 0.826810956001282 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705131 nonsynonymous SNV 0.268 0 hm6A_associated_SNPs_39972 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705131 104705131 1 + T C HNSC 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCAAGCCCTATGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.282281651923904 1 0.826810956001282 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705131 nonsynonymous SNV 0.268 0 hm6A_associated_SNPs_39972 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr10 1038576 1038576 1 + C G HNSC 1038563 + 1038543 1038583 41 CAACAGAATTACCATGATAGACTTTCACAAATTCTAACAGA CAACAGAATTACCATGATAGACTTTCACAAATTGTAACAGA < 41bp 1 0.530637455010401 1 0.904186606407166 experiment 0.938725089979197 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 34 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1038563 chr10:1038576 nonsynonymous SNV 0.944 1 hm6A_associated_SNPs_40062 0 0 1 1 1038572 1038593 mRNA hsa-miR-491-5p GTPBP4 miRanda miRanda
14034 chr4 74274350 74274350 1 + C G HNSC 74274359 + 74274339 74274379 41 CAGTTGCAACTCTTCGTGAAACCTATGGTGAAATGGCTGAC CAGTTGCAACTGTTCGTGAAACCTATGGTGAAATGGCTGAC < 41bp 1 0.103813352724451 1 0.859664261341095 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 12 ALB ENSG00000163631 CDS Human protein_coding chr4:74274359 chr4:74274350 nonsynonymous SNV 0.016 0 hm6A_associated_SNPs_40077 0 0 0 1 74274327 74274350 mRNA hsa-miR-454 ALB miRanda miRanda
14034 chr9 32420929 32420929 1 + G A HNSC 32420948 + 32420928 32420968 41 TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGGAG TAACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGGAG < 41bp 1 0.685997919893691 1 0.0417020916938782 experiment 0.628004160212619 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 2 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32420948 chr9:32420929 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_40163 0 0 1 1 32420921 32420943 mRNA hsa-miR-487b ACO1 miRanda miRanda
14034 chr5 76332495 76332495 1 + G T HNSC 76332477 + 76332457 76332497 41 CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATGAA CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATTAA < 41bp 1 0.45675714256834 1 0.932042121887207 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332477 chr5:76332495 stopgain 0.996 1 hm6A_associated_SNPs_40181 0 0 1 2 76332487 76332506 mRNA hsa-miR-144 AGGF1 miRanda miRanda
14034 chr5 76332495 76332495 1 + G T HNSC 76332477 + 76332457 76332497 41 CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATGAA CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATTAA < 41bp 1 0.45675714256834 1 0.932042121887207 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332477 chr5:76332495 stopgain 0.996 1 hm6A_associated_SNPs_40181 0 0 1 2 76332485 76332507 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr5 76332495 76332495 1 + G T HNSC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATTAAAATACTGGACTGTATTTTGACCACAGCAC < 41bp 1 0.377478815658371 1 0.973810911178589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332495 stopgain 0.996 1 hm6A_associated_SNPs_40182 0 0 1 2 76332487 76332506 mRNA hsa-miR-144 AGGF1 miRanda miRanda
14034 chr5 76332495 76332495 1 + G T HNSC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATTAAAATACTGGACTGTATTTTGACCACAGCAC < 41bp 1 0.377478815658371 1 0.973810911178589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332495 stopgain 0.996 1 hm6A_associated_SNPs_40182 0 0 1 2 76332485 76332507 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr17 18110247 18110247 1 + C T HNSC 18110240 + 18110220 18110260 41 AACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAA AACAGGGACCCTGCTCTGAAACCCAAGTGGTCCCACCGCAA < 41bp 1 0.260651042800655 1 0.0263834893703461 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 28 ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18110240 chr17:18110247 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_40191 0 0 1 1 18110246 18110268 mRNA hsa-miR-346 ALKBH5 miRanda miRanda
14034 chr11 65269788 65269788 1 + A G HNSC 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATTTAATAATAATTTAAAACTACTGTAGAAACTGCAGAG < 41bp 1 0.052032298254968 1 0.654785454273224 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269788 . . 0 hm6A_associated_SNPs_40192 0 0 1 3 65269782 65269804 lncRNA hsa-miR-3194-3p MALAT1 miRanda starBase2
14034 chr11 65269788 65269788 1 + A G HNSC 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATTTAATAATAATTTAAAACTACTGTAGAAACTGCAGAG < 41bp 1 0.052032298254968 1 0.654785454273224 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269788 . . 0 hm6A_associated_SNPs_40192 0 0 1 3 65269783 65269805 lncRNA hsa-miR-5691 MALAT1 miRanda starBase2
14034 chr11 65269788 65269788 1 + A G HNSC 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATTTAATAATAATTTAAAACTACTGTAGAAACTGCAGAG < 41bp 1 0.052032298254968 1 0.654785454273224 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269788 . . 0 hm6A_associated_SNPs_40192 0 0 1 3 65269783 65269805 lncRNA hsa-miR-6805-3p MALAT1 miRanda starBase2
14034 chr12 102117511 102117511 1 + G T HNSC 102117512 + 102117492 102117532 41 TTTTATAGGTAGCTCACATGACCAAAAGTGAACTATATCTT TTTTATAGGTAGCTCACATTACCAAAAGTGAACTATATCTT Direct Loss 1 0.107446669416692 1 0.0138484537601471 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102117512 chr12:102117511 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_40226 0 0 1 1 102117510 102117531 mRNA hsa-miR-190b CHPT1 miRanda miRanda
14034 chr12 102117511 102117511 1 + G T HNSC 102117523 + 102117503 102117543 41 GCTCACATGACCAAAAGTGAACTATATCTTCAAGACACTGT GCTCACATTACCAAAAGTGAACTATATCTTCAAGACACTGT < 41bp 1 0.318899552840663 1 0.0669597387313843 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102117523 chr12:102117511 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_40227 0 0 1 1 102117510 102117531 mRNA hsa-miR-190b CHPT1 miRanda miRanda
14034 chr5 40979897 40979897 1 + C T HNSC 40979882 + 40979862 40979902 41 GCAAAAGGATACTGCCTCTGACAGTTTGCAAGATGCATGTT GCAAAAGGATACTGCCTCTGACAGTTTGCAAGATGTATGTT < 41bp 1 0.294363972125479 1 0.401201874017715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 36 C7 ENSG00000112936 CDS Human protein_coding chr5:40979882 chr5:40979897 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_40237 0 0 0 1 40979877 40979902 mRNA hsa-miR-217 C7 miRanda miRanda
14034 chr1 206760273 206760273 1 + A G HNSC 206760268 + 206760248 206760288 41 TATGACAAGTTTAGGCAGAAACTGGAGGAGGCCTTAAGAGA TATGACAAGTTTAGGCAGAAACTGGGGGAGGCCTTAAGAGA < 41bp 1 0.57691147568136 1 0.949227094650269 experiment 0.846177048637281 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 RASSF5 ENSG00000136653 CDS Human other chr1:206760268 chr1:206760273 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_40245 0 0 0 1 206760251 206760274 mRNA hsa-miR-145 RASSF5 miRanda miRanda
14034 chr15 85188753 85188753 1 - G A HNSC 85188741 - 85188721 85188761 41 ACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG ACCCAGAGTTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG < 41bp 1 0.706721100730101 1 0.158749967813492 experiment 0.586557798539798 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188741 chr15:85188753 synonymous SNV . 0 hm6A_associated_SNPs_40316 0 0 1 3 85188737 85188760 mRNA hsa-miR-224 WDR73 miRanda miRanda
14034 chr15 85188753 85188753 1 - G A HNSC 85188741 - 85188721 85188761 41 ACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG ACCCAGAGTTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG < 41bp 1 0.706721100730101 1 0.158749967813492 experiment 0.586557798539798 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188741 chr15:85188753 synonymous SNV . 0 hm6A_associated_SNPs_40316 0 0 1 3 85188753 85188772 mRNA hsa-miR-330-5p WDR73 miRanda miRanda
14034 chr15 85188753 85188753 1 - G A HNSC 85188741 - 85188721 85188761 41 ACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG ACCCAGAGTTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG < 41bp 1 0.706721100730101 1 0.158749967813492 experiment 0.586557798539798 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188741 chr15:85188753 synonymous SNV . 0 hm6A_associated_SNPs_40316 0 0 1 3 85188753 85188772 mRNA hsa-miR-326 WDR73 miRanda miRanda
14034 chr15 85188753 85188753 1 - G A HNSC 85188761 - 85188741 85188781 41 AGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGA AGTATCCGTACCTAGCCCTGACCCAGAGTTGCTGCGAGTGA < 41bp 1 0.468232875344032 1 0.106861889362335 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188761 chr15:85188753 synonymous SNV . 0 hm6A_associated_SNPs_40317 0 0 1 3 85188737 85188760 mRNA hsa-miR-224 WDR73 miRanda miRanda
14034 chr15 85188753 85188753 1 - G A HNSC 85188761 - 85188741 85188781 41 AGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGA AGTATCCGTACCTAGCCCTGACCCAGAGTTGCTGCGAGTGA < 41bp 1 0.468232875344032 1 0.106861889362335 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188761 chr15:85188753 synonymous SNV . 0 hm6A_associated_SNPs_40317 0 0 1 3 85188753 85188772 mRNA hsa-miR-330-5p WDR73 miRanda miRanda
14034 chr15 85188753 85188753 1 - G A HNSC 85188761 - 85188741 85188781 41 AGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGA AGTATCCGTACCTAGCCCTGACCCAGAGTTGCTGCGAGTGA < 41bp 1 0.468232875344032 1 0.106861889362335 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188761 chr15:85188753 synonymous SNV . 0 hm6A_associated_SNPs_40317 0 0 1 3 85188753 85188772 mRNA hsa-miR-326 WDR73 miRanda miRanda
14034 chr5 118729027 118729027 1 + A C HNSC 118729016 + 118728996 118729036 41 AATCCTTTTGGGAATTTTAAACCCCACTTACAAAAACTATG AATCCTTTTGGGAATTTTAAACCCCACTTACCAAAACTATG < 41bp 1 0.699840694450316 1 0.988710165023804 experiment 0.600318611099368 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118729016 chr5:118729027 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_40323 0 0 1 2 118729013 118729032 mRNA hsa-miR-129-5p TNFAIP8 miRanda miRanda
14034 chr5 118729027 118729027 1 + A C HNSC 118729016 + 118728996 118729036 41 AATCCTTTTGGGAATTTTAAACCCCACTTACAAAAACTATG AATCCTTTTGGGAATTTTAAACCCCACTTACCAAAACTATG < 41bp 1 0.699840694450316 1 0.988710165023804 experiment 0.600318611099368 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118729016 chr5:118729027 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_40323 0 0 1 2 118729018 118729038 mRNA hsa-miR-376c TNFAIP8 miRanda miRanda
14034 chr11 65272474 65272474 1 + C T HNSC 65272487 + 65272467 65272507 41 CAGTGGACAAAATGAGGAAAACAGGTGAACAAGCTTTTTCT CAGTGGATAAAATGAGGAAAACAGGTGAACAAGCTTTTTCT < 41bp 1 0.0845772270741855 1 0.621384799480438 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272487 chr11:65272474 . . 0 hm6A_associated_SNPs_40365 0 0 1 2 65272453 65272474 lncRNA hsa-miR-6509-3p MALAT1 miRanda starBase2
14034 chr11 65272474 65272474 1 + C T HNSC 65272487 + 65272467 65272507 41 CAGTGGACAAAATGAGGAAAACAGGTGAACAAGCTTTTTCT CAGTGGATAAAATGAGGAAAACAGGTGAACAAGCTTTTTCT < 41bp 1 0.0845772270741855 1 0.621384799480438 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272487 chr11:65272474 . . 0 hm6A_associated_SNPs_40365 0 0 1 2 65272467 65272486 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr5 40936557 40936557 1 + C A HNSC 40936566 + 40936546 40936586 41 TATCGATAAACCTCCTCCTAACATAGAACTTACTGGAAATG TATCGATAAACATCCTCCTAACATAGAACTTACTGGAAATG < 41bp 1 0.21738219766509 1 0.216305166482925 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 12 C7 ENSG00000112936 CDS Human protein_coding chr5:40936566 chr5:40936557 nonsynonymous SNV 0.880 2 hm6A_associated_SNPs_40373 0 0 0 1 40936537 40936559 mRNA hsa-miR-154 C7 miRanda miRanda
14034 chr19 1271989 1271989 1 + G C HNSC 1272006 + 1271986 1272026 41 TCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT TCACAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT < 41bp 1 0.305607363951379 1 0.887459754943848 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272006 chr19:1271989 nonsynonymous SNV 0.325 1 hm6A_associated_SNPs_40382 0 0 1 4 1271980 1272000 mRNA hsa-miR-29a CIRBP miRanda miRanda
14034 chr19 1271989 1271989 1 + G C HNSC 1272006 + 1271986 1272026 41 TCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT TCACAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT < 41bp 1 0.305607363951379 1 0.887459754943848 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272006 chr19:1271989 nonsynonymous SNV 0.325 1 hm6A_associated_SNPs_40382 0 0 1 4 1271977 1272000 mRNA hsa-miR-29a CIRBP miRanda miRanda
14034 chr19 1271989 1271989 1 + G C HNSC 1272006 + 1271986 1272026 41 TCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT TCACAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT < 41bp 1 0.305607363951379 1 0.887459754943848 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272006 chr19:1271989 nonsynonymous SNV 0.325 1 hm6A_associated_SNPs_40382 0 0 1 4 1271980 1272000 mRNA hsa-miR-29c CIRBP miRanda miRanda
14034 chr19 1271989 1271989 1 + G C HNSC 1272006 + 1271986 1272026 41 TCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT TCACAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCT < 41bp 1 0.305607363951379 1 0.887459754943848 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272006 chr19:1271989 nonsynonymous SNV 0.325 1 hm6A_associated_SNPs_40382 0 0 1 4 1271977 1272000 mRNA hsa-miR-29c CIRBP miRanda miRanda
14034 chr1 235599721 235599721 1 + C G HNSC 235599707 + 235599687 235599727 41 ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTCTGACAC ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTGTGACAC < 41bp 1 0.656219930394222 1 0.0044996440410614 experiment 0.687560139211557 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 TBCE ENSG00000116957 CDS Human protein_coding chr1:235599707 chr1:235599721 nonsynonymous SNV 0.920 3 hm6A_associated_SNPs_40386 0 0 1 3 235599710 235599731 mRNA hsa-miR-199a-5p TBCE miRanda miRanda
14034 chr1 235599721 235599721 1 + C G HNSC 235599707 + 235599687 235599727 41 ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTCTGACAC ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTGTGACAC < 41bp 1 0.656219930394222 1 0.0044996440410614 experiment 0.687560139211557 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 TBCE ENSG00000116957 CDS Human protein_coding chr1:235599707 chr1:235599721 nonsynonymous SNV 0.920 3 hm6A_associated_SNPs_40386 0 0 1 3 235599708 235599731 mRNA hsa-miR-199b-5p TBCE miRanda miRanda
14034 chr1 235599721 235599721 1 + C G HNSC 235599707 + 235599687 235599727 41 ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTCTGACAC ATTTTGAATTTCAGGTTAGAACAATTAATCCTCTGTGACAC < 41bp 1 0.656219930394222 1 0.0044996440410614 experiment 0.687560139211557 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 TBCE ENSG00000116957 CDS Human protein_coding chr1:235599707 chr1:235599721 nonsynonymous SNV 0.920 3 hm6A_associated_SNPs_40386 0 0 1 3 235599710 235599732 mRNA hsa-miR-145 TBCE miRanda miRanda
14034 chrX 73041212 73041212 1 - A T HNSC 73041193 - 73041173 73041213 41 ATATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT AAATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT < 41bp 1 0.397155502750127 1 0.957620143890381 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041193 chrX:73041212 . . 0 hm6A_associated_SNPs_40400 0 0 1 1 73041191 73041212 lncRNA hsa-miR-3909 XIST miRanda starBase2
14034 chr10 62551943 62551943 1 + G A HNSC 62551959 + 62551939 62551979 41 AGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA AGAAATGGAATCTTTACAGGACTATAAGAATACATTTCCCA < 41bp 1 0.772023138147045 1 0.92734968662262 experiment 0.45595372370591 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 CDK1 ENSG00000170312 CDS Human protein_coding chr10:62551959 chr10:62551943 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_40409 0 0 1 1 62551938 62551959 mRNA hsa-miR-486-5p CDK1 miRanda miRanda
14034 chr4 185593502 185593502 1 + A G HNSC 185593517 + 185593497 185593537 41 TGGACATCGAATTCAAAGAAACTGGAGAGGCTGGGGTCAGC TGGACGTCGAATTCAAAGAAACTGGAGAGGCTGGGGTCAGC < 41bp 1 0.0689315273654329 1 0.994514465332031 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185593517 chr4:185593502 synonymous SNV . 0 hm6A_associated_SNPs_40410 0 0 0 1 185593502 185593523 mRNA hsa-miR-145 CCDC111 miRanda miRanda
14034 chr15 25327970 25327970 1 + A T HNSC 25327958 + 25327938 25327978 41 TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGTAAACTCTA < 41bp 1 0.0796794064583372 1 0.141809314489365 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 SNORD116-16 ENSG00000207263 ncRNA_exonic Human snoRNA chr15:25327958 chr15:25327970 . . 0 hm6A_associated_SNPs_40420 0 0 0 1 25327966 25327986 mRNA hsa-miR-202 SNORD116-16 miRanda miRanda
14034 chr11 65273249 65273249 1 + A C HNSC 65273263 + 65273243 65273283 41 ATTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG ATTATACTACTTATCCAGTGACTAAAACCAACTTAAACCAG < 41bp 1 0.482215080335951 1 0.67906129360199 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273263 chr11:65273249 . . 0 hm6A_associated_SNPs_40432 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374a-5p MALAT1 miRanda starBase2
14034 chr11 65273249 65273249 1 + A C HNSC 65273263 + 65273243 65273283 41 ATTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG ATTATACTACTTATCCAGTGACTAAAACCAACTTAAACCAG < 41bp 1 0.482215080335951 1 0.67906129360199 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273263 chr11:65273249 . . 0 hm6A_associated_SNPs_40432 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374b-5p MALAT1 miRanda starBase2
14034 chr11 65273249 65273249 1 + A C HNSC 65273269 + 65273249 65273289 41 ATACTTATCCAGTGACTAAAACCAACTTAAACCAGTAAGTG CTACTTATCCAGTGACTAAAACCAACTTAAACCAGTAAGTG < 41bp 1 0.148934442156786 1 0.725570440292358 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273269 chr11:65273249 . . 0 hm6A_associated_SNPs_40433 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374a-5p MALAT1 miRanda starBase2
14034 chr11 65273249 65273249 1 + A C HNSC 65273269 + 65273249 65273289 41 ATACTTATCCAGTGACTAAAACCAACTTAAACCAGTAAGTG CTACTTATCCAGTGACTAAAACCAACTTAAACCAGTAAGTG < 41bp 1 0.148934442156786 1 0.725570440292358 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273269 chr11:65273249 . . 0 hm6A_associated_SNPs_40433 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374b-5p MALAT1 miRanda starBase2
14034 chr12 7084997 7084997 1 + A G HNSC 7084982 + 7084962 7085002 41 GGTCATTTGACAGTAGTAGAACCTGTTCTGAAACCAGAAAC GGTCATTTGACAGTAGTAGAACCTGTTCTGAAACCGGAAAC < 41bp 1 0.19906707671766 1 0.772855699062347 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 EMG1 ENSG00000126749 UTR3 Human protein_coding chr12:7084982 chr12:7084997 . . 0 hm6A_associated_SNPs_40434 0 0 1 1 7084987 7085009 mRNA hsa-miR-421 EMG1 miRanda miRanda
14034 chr12 7084997 7084997 1 + A G HNSC 7084994 + 7084974 7085014 41 GTAGTAGAACCTGTTCTGAAACCAGAAACTGTTGATGTCAC GTAGTAGAACCTGTTCTGAAACCGGAAACTGTTGATGTCAC < 41bp 1 0.0945602162630933 1 0.849279820919037 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 EMG1 ENSG00000126749 UTR3 Human protein_coding chr12:7084994 chr12:7084997 . . 0 hm6A_associated_SNPs_40435 0 0 1 1 7084987 7085009 mRNA hsa-miR-421 EMG1 miRanda miRanda
14034 chr12 7084997 7084997 1 + A G HNSC 7085001 + 7084981 7085021 41 AACCTGTTCTGAAACCAGAAACTGTTGATGTCACATCCTTT AACCTGTTCTGAAACCGGAAACTGTTGATGTCACATCCTTT < 41bp 1 0.290767853637903 1 0.921452581882477 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 17 EMG1 ENSG00000126749 UTR3 Human protein_coding chr12:7085001 chr12:7084997 . . 0 hm6A_associated_SNPs_40436 0 0 1 1 7084987 7085009 mRNA hsa-miR-421 EMG1 miRanda miRanda
14034 chr17 48562221 48562221 1 + G A HNSC 48562222 + 48562202 48562242 41 TCCCCTGTGCCAGGAGGATGACAAAAATGTTCCTGTGTTCC TCCCCTGTGCCAGGAGGATAACAAAAATGTTCCTGTGTTCC < 41bp 1 0.601305608807047 1 0.715957343578339 experiment 0.797388782385906 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48562222 chr17:48562221 synonymous SNV . 0 hm6A_associated_SNPs_40437 0 0 0 1 48562216 48562237 mRNA hsa-miR-873 RSAD1 miRanda miRanda
14034 chr2 173431653 173431653 1 + A G HNSC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCGAACTAGAACTTGAAGGACTAAA < 41bp 1 0.222924748956471 1 0.882434844970703 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 35 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431653 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_40510 0 0 1 2 173431644 173431661 mRNA hsa-miR-33a PDK1 miRanda miRanda
14034 chr2 173431653 173431653 1 + A G HNSC 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTCTCCCGAACTAGAACTTGAAGGACTAAA < 41bp 1 0.222924748956471 1 0.882434844970703 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 35 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431653 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_40510 0 0 1 2 173431645 173431661 mRNA hsa-miR-33b PDK1 miRanda miRanda
14034 chr17 10608831 10608831 1 + G A HNSC 10608828 + 10608808 10608848 41 GAGCACAATCCAAATACGGAACTGAATAGTCCTCAAGGTGA GAGCACAATCCAAATACGGAACTAAATAGTCCTCAAGGTGA < 41bp 1 0.600273648538522 1 0.900075316429138 experiment 0.799452702922956 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608828 chr17:10608831 synonymous SNV . 0 hm6A_associated_SNPs_40550 0 0 1 2 10608815 10608838 mRNA hsa-miR-181b C17orf48 miRanda miRanda
14034 chr17 10608831 10608831 1 + G A HNSC 10608828 + 10608808 10608848 41 GAGCACAATCCAAATACGGAACTGAATAGTCCTCAAGGTGA GAGCACAATCCAAATACGGAACTAAATAGTCCTCAAGGTGA < 41bp 1 0.600273648538522 1 0.900075316429138 experiment 0.799452702922956 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608828 chr17:10608831 synonymous SNV . 0 hm6A_associated_SNPs_40550 0 0 1 2 10608815 10608838 mRNA hsa-miR-181d C17orf48 miRanda miRanda
14034 chr7 150771922 150771922 1 - T A HNSC 150771937 - 150771917 150771957 41 CTCACACCCCTTTGGCTAGGACCACTCACGTGGTGATCTGT CTCACACCCCTTTGGCTAGGACCACTCACGTGGTGTTCTGT < 41bp 1 0.0994444984227908 1 0.589692115783691 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150771937 chr7:150771922 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_40551 0 0 1 1 150771921 150771942 mRNA hsa-miR-197 LOC100287222 miRanda miRanda
14034 chr8 33356711 33356711 1 + C T HNSC 33356722 + 33356702 33356742 41 TGTAGGGTGCGCCTTCAGAAACCTGCTGCACTTTTCTGATA TGTAGGGTGTGCCTTCAGAAACCTGCTGCACTTTTCTGATA < 41bp 1 0.506486962163928 1 0.0399472713470459 experiment 0.987026075672144 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 TTI2 ENSG00000129696 CDS Human protein_coding chr8:33356722 chr8:33356711 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_40599 0 0 1 3 33356710 33356736 mRNA hsa-miR-93 MAK16 miRanda miRanda
14034 chr8 33356711 33356711 1 + C T HNSC 33356722 + 33356702 33356742 41 TGTAGGGTGCGCCTTCAGAAACCTGCTGCACTTTTCTGATA TGTAGGGTGTGCCTTCAGAAACCTGCTGCACTTTTCTGATA < 41bp 1 0.506486962163928 1 0.0399472713470459 experiment 0.987026075672144 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 TTI2 ENSG00000129696 CDS Human protein_coding chr8:33356722 chr8:33356711 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_40599 0 0 1 3 33356709 33356730 mRNA hsa-miR-214 MAK16 miRanda miRanda
14034 chr8 33356711 33356711 1 + C T HNSC 33356722 + 33356702 33356742 41 TGTAGGGTGCGCCTTCAGAAACCTGCTGCACTTTTCTGATA TGTAGGGTGTGCCTTCAGAAACCTGCTGCACTTTTCTGATA < 41bp 1 0.506486962163928 1 0.0399472713470459 experiment 0.987026075672144 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 TTI2 ENSG00000129696 CDS Human protein_coding chr8:33356722 chr8:33356711 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_40599 0 0 1 3 33356710 33356736 mRNA hsa-miR-20b MAK16 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCTGCTTTTCTTGGACAGTGACTTACTTTGATTCT < 41bp 1 0.694615422898894 1 0.560882091522217 experiment 0.610769154202213 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40602 0 0 1 6 153591543 153591564 mRNA hsa-miR-320a ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCTGCTTTTCTTGGACAGTGACTTACTTTGATTCT < 41bp 1 0.694615422898894 1 0.560882091522217 experiment 0.610769154202213 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40602 0 0 1 6 153591539 153591562 mRNA hsa-miR-301a ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCTGCTTTTCTTGGACAGTGACTTACTTTGATTCT < 41bp 1 0.694615422898894 1 0.560882091522217 experiment 0.610769154202213 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40602 0 0 1 6 153591553 153591576 mRNA hsa-miR-339-5p ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCTGCTTTTCTTGGACAGTGACTTACTTTGATTCT < 41bp 1 0.694615422898894 1 0.560882091522217 experiment 0.610769154202213 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40602 0 0 1 6 153591543 153591564 mRNA hsa-miR-320b ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCTGCTTTTCTTGGACAGTGACTTACTTTGATTCT < 41bp 1 0.694615422898894 1 0.560882091522217 experiment 0.610769154202213 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40602 0 0 1 6 153591545 153591564 mRNA hsa-miR-320c ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591570 + 153591550 153591590 41 CCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCT CCTGTTGCTGCTTTTCTTGGACAGTGACTTACTTTGATTCT < 41bp 1 0.694615422898894 1 0.560882091522217 experiment 0.610769154202213 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591570 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40602 0 0 1 6 153591546 153591564 mRNA hsa-miR-320d ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCTGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.372645725321984 1 0.347722053527832 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40603 0 0 1 6 153591543 153591564 mRNA hsa-miR-320a ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCTGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.372645725321984 1 0.347722053527832 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40603 0 0 1 6 153591539 153591562 mRNA hsa-miR-301a ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCTGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.372645725321984 1 0.347722053527832 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40603 0 0 1 6 153591553 153591576 mRNA hsa-miR-339-5p ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCTGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.372645725321984 1 0.347722053527832 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40603 0 0 1 6 153591543 153591564 mRNA hsa-miR-320b ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCTGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.372645725321984 1 0.347722053527832 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40603 0 0 1 6 153591545 153591564 mRNA hsa-miR-320c ARL6IP6 miRanda miRanda
14034 chr2 153591558 153591558 1 + A T HNSC 153591576 + 153591556 153591596 41 GCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA GCTGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAA < 41bp 1 0.372645725321984 1 0.347722053527832 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153591576 chr2:153591558 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_40603 0 0 1 6 153591546 153591564 mRNA hsa-miR-320d ARL6IP6 miRanda miRanda
14034 chr13 111919973 111919973 1 + T C HNSC 111919956 + 111919936 111919976 41 ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGT ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTACTGT < 41bp 1 0.130332641681827 1 0.513197243213654 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111919956 chr13:111919973 synonymous SNV . 0 hm6A_associated_SNPs_40646 0 0 1 3 111919960 111919983 mRNA hsa-miR-32 ARHGEF7 miRanda miRanda
14034 chr13 111919973 111919973 1 + T C HNSC 111919956 + 111919936 111919976 41 ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGT ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTACTGT < 41bp 1 0.130332641681827 1 0.513197243213654 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111919956 chr13:111919973 synonymous SNV . 0 hm6A_associated_SNPs_40646 0 0 1 3 111919961 111919982 mRNA hsa-miR-96 ARHGEF7 miRanda miRanda
14034 chr13 111919973 111919973 1 + T C HNSC 111919956 + 111919936 111919976 41 ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGT ACCTGATGCCACAGATGAAAACCCTGTACCTCACGTACTGT < 41bp 1 0.130332641681827 1 0.513197243213654 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111919956 chr13:111919973 synonymous SNV . 0 hm6A_associated_SNPs_40646 0 0 1 3 111919961 111919982 mRNA hsa-miR-1271 ARHGEF7 miRanda miRanda
14034 chr7 104748308 104748308 1 + G A HNSC 104748310 + 104748290 104748330 41 TTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGATC TTGTATCTGGTTTCGGACAGACTGTTAATGACAATTTGATC < 41bp 1 0.740009543979442 1 0.998412311077118 experiment 0.519980912041117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748310 chr7:104748308 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_40651 0 0 1 2 104748292 104748316 mRNA hsa-miR-212 MLL5 miRanda miRanda
14034 chr7 104748308 104748308 1 + G A HNSC 104748310 + 104748290 104748330 41 TTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGATC TTGTATCTGGTTTCGGACAGACTGTTAATGACAATTTGATC < 41bp 1 0.740009543979442 1 0.998412311077118 experiment 0.519980912041117 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748310 chr7:104748308 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_40651 0 0 1 2 104748292 104748316 mRNA hsa-miR-132 MLL5 miRanda miRanda
14034 chr18 12310986 12310986 1 + G A HNSC 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAAGCACCATGG < 41bp 1 0.489529115359474 1 0.906203031539917 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310986 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_40660 0 0 1 1 12310965 12310987 mRNA hsa-miR-149 TUBB6 miRanda miRanda
14034 chr18 12310986 12310986 1 + G A HNSC 12310996 + 12310976 12311016 41 CTTAGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT CTTAGAGCCAAGCACCATGGACAGCGTGCGGTCTGGGCCTT < 41bp 1 0.706102716076366 1 0.881454467773438 experiment 0.587794567847268 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310996 chr18:12310986 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_40661 0 0 1 1 12310965 12310987 mRNA hsa-miR-149 TUBB6 miRanda miRanda
14034 chr17 76212844 76212844 1 + A G HNSC 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGGACAGAGAGAGAGCCAA < 41bp 1 0.167763067730198 1 0.150103121995926 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212844 synonymous SNV . 0 hm6A_associated_SNPs_40670 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212844 76212844 1 + A G HNSC 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGGACAGAGAGAGAGCCAA < 41bp 1 0.167763067730198 1 0.150103121995926 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212844 synonymous SNV . 0 hm6A_associated_SNPs_40670 0 0 1 2 76212840 76212859 mRNA hsa-miR-375 BIRC5 miRanda miRanda
14034 chr17 76212844 76212844 1 + A G HNSC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAGAGAGCCAAGAACA < 41bp 1 0.606853034436108 1 0.281306505203247 experiment 0.786293931127785 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212844 synonymous SNV . 0 hm6A_associated_SNPs_40671 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212844 76212844 1 + A G HNSC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAGAGAGCCAAGAACA < 41bp 1 0.606853034436108 1 0.281306505203247 experiment 0.786293931127785 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212844 synonymous SNV . 0 hm6A_associated_SNPs_40671 0 0 1 2 76212840 76212859 mRNA hsa-miR-375 BIRC5 miRanda miRanda
14034 chr17 56772397 56772397 1 + A T HNSC 56772413 + 56772393 56772433 41 AAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC AAGATGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC < 41bp 1 0.651825009666608 1 0.676488876342773 experiment 0.696349980666785 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772413 chr17:56772397 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_40677 0 0 1 2 56772389 56772412 mRNA hsa-miR-199a-5p RAD51C miRanda miRanda
14034 chr17 56772397 56772397 1 + A T HNSC 56772413 + 56772393 56772433 41 AAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC AAGATGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC < 41bp 1 0.651825009666608 1 0.676488876342773 experiment 0.696349980666785 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772413 chr17:56772397 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_40677 0 0 1 2 56772389 56772412 mRNA hsa-miR-199b-5p RAD51C miRanda miRanda
14034 chr12 8866600 8866600 1 + G T HNSC 8866616 + 8866596 8866636 41 TGATGGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTG TGATTGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTG < 41bp 1 0.58955251145947 1 0.542043209075928 experiment 0.82089497708106 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8866616 chr12:8866600 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_40688 0 0 1 3 8866594 8866615 mRNA hsa-miR-29a RIMKLB miRanda miRanda
14034 chr12 8866600 8866600 1 + G T HNSC 8866616 + 8866596 8866636 41 TGATGGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTG TGATTGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTG < 41bp 1 0.58955251145947 1 0.542043209075928 experiment 0.82089497708106 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8866616 chr12:8866600 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_40688 0 0 1 3 8866591 8866615 mRNA hsa-miR-29b RIMKLB miRanda miRanda
14034 chr12 8866600 8866600 1 + G T HNSC 8866616 + 8866596 8866636 41 TGATGGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTG TGATTGATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTG < 41bp 1 0.58955251145947 1 0.542043209075928 experiment 0.82089497708106 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8866616 chr12:8866600 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_40688 0 0 1 3 8866594 8866615 mRNA hsa-miR-29c RIMKLB miRanda miRanda
14034 chr1 154437818 154437818 1 + T G HNSC 154437822 + 154437802 154437842 41 GGACCCACGGAGCCCTTATGACATCAGCAATACAGACTACT GGACCCACGGAGCCCTGATGACATCAGCAATACAGACTACT < 41bp 1 0.785045528900691 1 0.996787905693054 experiment 0.429908942198617 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 IL6R ENSG00000160712 CDS Human protein_coding chr1:154437822 chr1:154437818 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_40720 0 0 1 1 154437811 154437834 mRNA hsa-miR-137 IL6R miRanda miRanda
14034 chr2 66775128 66775128 1 + C T HNSC 66775118 + 66775098 66775138 41 GAAAAAGCAGTTGGCACAAGACACGGGACTCACCATCCTTC GAAAAAGCAGTTGGCACAAGACACGGGACTTACCATCCTTC < 41bp 1 0.296960579116108 1 0.639776229858398 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66775118 chr2:66775128 synonymous SNV . 0 hm6A_associated_SNPs_40722 0 0 0 1 66775127 66775150 mRNA hsa-miR-367 MEIS1 miRanda miRanda
14034 chr2 202131421 202131421 1 + G C HNSC 202131422 + 202131402 202131442 41 CTGCTCTTCCGAATTAATAGACTGGATTTGCTGATTACCTA CTGCTCTTCCGAATTAATACACTGGATTTGCTGATTACCTA Direct Loss 1 0.34958280980166 1 0.975023150444031 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202131422 chr2:202131421 nonsynonymous SNV 0.001 5 hm6A_associated_SNPs_40766 0 0 1 1 202131419 202131440 mRNA hsa-miR-194 CASP8 miRanda miRanda
14034 chr7 37989863 37989863 1 + C A HNSC 37989855 + 37989835 37989875 41 ATTGCTATCCTGTCCAGGAAACCTTTACCATAAACTACAGT ATTGCTATCCTGTCCAGGAAACCTTTACAATAAACTACAGT < 41bp 1 0.587685187717061 1 0.718188047409058 experiment 0.824629624565878 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37989855 chr7:37989863 synonymous SNV . 0 hm6A_associated_SNPs_40785 0 0 1 3 37989853 37989879 mRNA hsa-miR-141 EPDR1 miRanda miRanda
14034 chr7 37989863 37989863 1 + C A HNSC 37989855 + 37989835 37989875 41 ATTGCTATCCTGTCCAGGAAACCTTTACCATAAACTACAGT ATTGCTATCCTGTCCAGGAAACCTTTACAATAAACTACAGT < 41bp 1 0.587685187717061 1 0.718188047409058 experiment 0.824629624565878 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37989855 chr7:37989863 synonymous SNV . 0 hm6A_associated_SNPs_40785 0 0 1 3 37989853 37989879 mRNA hsa-miR-200a EPDR1 miRanda miRanda
14034 chr7 37989863 37989863 1 + C A HNSC 37989855 + 37989835 37989875 41 ATTGCTATCCTGTCCAGGAAACCTTTACCATAAACTACAGT ATTGCTATCCTGTCCAGGAAACCTTTACAATAAACTACAGT < 41bp 1 0.587685187717061 1 0.718188047409058 experiment 0.824629624565878 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37989855 chr7:37989863 synonymous SNV . 0 hm6A_associated_SNPs_40785 0 0 1 3 37989859 37989881 mRNA hsa-miR-342-3p EPDR1 miRanda miRanda
14034 chr8 27634270 27634270 1 + C T HNSC 27634258 + 27634238 27634278 41 AAAAACCACAGAAGAGTTTAACTGCTAAGTATCAACCAAAG AAAAACCACAGAAGAGTTTAACTGCTAAGTATTAACCAAAG < 41bp 1 0.453463881367297 1 0.977851033210754 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634258 chr8:27634270 stopgain 0.986 0 hm6A_associated_SNPs_40846 0 0 1 1 27634254 27634279 mRNA hsa-miR-9 ESCO2 miRanda miRanda
14034 chr1 112999913 112999913 1 + C T HNSC 112999918 + 112999898 112999938 41 CTACCACTCCATTGACCAAAACTCATTCCCAGGCAGCCTCT CTACCACTCCATTGATCAAAACTCATTCCCAGGCAGCCTCT < 41bp 1 0.797063302681647 1 0.956131339073181 experiment 0.405873394636705 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 16 CTTNBP2NL ENSG00000143079 CDS Human protein_coding chr1:112999918 chr1:112999913 nonsynonymous SNV 0.907 1 hm6A_associated_SNPs_40875 0 0 1 1 112999894 112999917 mRNA hsa-miR-182 CTTNBP2NL miRanda miRanda
14034 chr17 41347008 41347008 1 + A G HNSC 41347012 + 41346992 41347032 41 CTTTGAGCTGTTGGATATAAACATTGTTCAAGAGTTGGAGA CTTTGAGCTGTTGGATGTAAACATTGTTCAAGAGTTGGAGA < 41bp 1 0.67569536318453 1 0.0601181983947754 experiment 0.648609273630941 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 NBR1 ENSG00000188554 CDS Human protein_coding chr17:41347012 chr17:41347008 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_40877 0 0 1 1 41346994 41347017 mRNA hsa-miR-590-3p NBR1 miRanda miRanda
14034 chr12 53455639 53455639 1 + G A HNSC 53455647 + 53455627 53455667 41 TGGGGCCTTCCTGATCAGGGACAGTCATTCATTCCAAGGAG TGGGGCCTTCCTAATCAGGGACAGTCATTCATTCCAAGGAG < 41bp 1 0.417557326168323 1 0.950420260429382 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 13 TNS2 ENSG00000111077 CDS Human protein_coding chr12:53455647 chr12:53455639 synonymous SNV . 0 hm6A_associated_SNPs_40911 0 0 1 2 53455632 53455656 mRNA hsa-miR-200b TENC1 miRanda miRanda
14034 chr12 53455639 53455639 1 + G A HNSC 53455647 + 53455627 53455667 41 TGGGGCCTTCCTGATCAGGGACAGTCATTCATTCCAAGGAG TGGGGCCTTCCTAATCAGGGACAGTCATTCATTCCAAGGAG < 41bp 1 0.417557326168323 1 0.950420260429382 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 13 TNS2 ENSG00000111077 CDS Human protein_coding chr12:53455647 chr12:53455639 synonymous SNV . 0 hm6A_associated_SNPs_40911 0 0 1 2 53455631 53455656 mRNA hsa-miR-200c TENC1 miRanda miRanda
14034 chr6 7601613 7601613 1 + C T HNSC 7601631 + 7601611 7601651 41 AACGGTTTGTTTGTGATCTAACTCAAGCTGATCGTCTTGCC AATGGTTTGTTTGTGATCTAACTCAAGCTGATCGTCTTGCC < 41bp 1 0.426282058573229 1 0.600607931613922 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7601631 chr6:7601613 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_40950 0 0 1 1 7601597 7601618 mRNA hsa-miR-451 SNRNP48 miRanda miRanda
14034 chr11 70171106 70171106 1 + C G HNSC 70171093 + 70171073 70171113 41 GCACTGAAGTCCTTATTTGAACACCACAAAGCTCTGGATGA GCACTGAAGTCCTTATTTGAACACCACAAAGCTGTGGATGA < 41bp 1 0.528342903330994 1 0.762218832969666 experiment 0.943314193338011 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 34 PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70171093 chr11:70171106 nonsynonymous SNV 0.990 4 hm6A_associated_SNPs_40952 0 0 1 2 70171101 70171117 mRNA hsa-miR-204 PPFIA1 miRanda miRanda
14034 chr11 70171106 70171106 1 + C G HNSC 70171093 + 70171073 70171113 41 GCACTGAAGTCCTTATTTGAACACCACAAAGCTCTGGATGA GCACTGAAGTCCTTATTTGAACACCACAAAGCTGTGGATGA < 41bp 1 0.528342903330994 1 0.762218832969666 experiment 0.943314193338011 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 34 PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70171093 chr11:70171106 nonsynonymous SNV 0.990 4 hm6A_associated_SNPs_40952 0 0 1 2 70171101 70171117 mRNA hsa-miR-211 PPFIA1 miRanda miRanda
14034 chr9 35660929 35660929 1 + C G HNSC 35660947 + 35660927 35660967 41 CCCCACACAGAGGCCAGCAGACCTCTTCCTGAGGACTTCTG CCGCACACAGAGGCCAGCAGACCTCTTCCTGAGGACTTCTG < 41bp 1 0.690122575177727 1 0.994763970375061 experiment 0.619754849644546 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660947 chr9:35660929 synonymous SNV . 0 hm6A_associated_SNPs_40974 0 0 0 3 35660921 35660944 mRNA hsa-miR-149 CCDC107 miRanda miRanda
14034 chr9 35660929 35660929 1 + C G HNSC 35660947 + 35660927 35660967 41 CCCCACACAGAGGCCAGCAGACCTCTTCCTGAGGACTTCTG CCGCACACAGAGGCCAGCAGACCTCTTCCTGAGGACTTCTG < 41bp 1 0.690122575177727 1 0.994763970375061 experiment 0.619754849644546 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660947 chr9:35660929 synonymous SNV . 0 hm6A_associated_SNPs_40974 0 0 0 3 35660906 35660929 mRNA hsa-miR-185 CCDC107 miRanda miRanda
14034 chr9 35660929 35660929 1 + C G HNSC 35660947 + 35660927 35660967 41 CCCCACACAGAGGCCAGCAGACCTCTTCCTGAGGACTTCTG CCGCACACAGAGGCCAGCAGACCTCTTCCTGAGGACTTCTG < 41bp 1 0.690122575177727 1 0.994763970375061 experiment 0.619754849644546 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660947 chr9:35660929 synonymous SNV . 0 hm6A_associated_SNPs_40974 0 0 0 3 35660912 35660933 mRNA hsa-miR-491-5p CCDC107 miRanda miRanda
14034 chr14 24113650 24113650 1 + G A HNSC 24113645 + 24113625 24113665 41 GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCACT GTGTCTACAATGTCAGCAAGACAGCACTGCTGGGTCTCACT < 41bp 1 0.314832155251783 1 0.00376540422439575 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113645 chr14:24113650 synonymous SNV . 0 hm6A_associated_SNPs_40977 0 0 1 2 24113625 24113651 mRNA hsa-miR-187 DHRS2 miRanda miRanda
14034 chr14 24113650 24113650 1 + G A HNSC 24113645 + 24113625 24113665 41 GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCACT GTGTCTACAATGTCAGCAAGACAGCACTGCTGGGTCTCACT < 41bp 1 0.314832155251783 1 0.00376540422439575 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113645 chr14:24113650 synonymous SNV . 0 hm6A_associated_SNPs_40977 0 0 1 2 24113645 24113666 mRNA hsa-miR-411 DHRS2 miRanda miRanda
14034 chr20 2637154 2637154 1 + C T HNSC 2637157 + 2637137 2637177 41 CATCTCCCGATACCTGGCAAACAAATGCAGTATTGCCTCAC CATCTCCCGATACCTGGTAAACAAATGCAGTATTGCCTCAC < 41bp 1 0.789353682862531 1 0.079161673784256 experiment 0.421292634274938 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637157 chr20:2637154 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_40999 0 0 1 4 2637146 2637168 mRNA hsa-miR-217 NOP56 miRanda miRanda
14034 chr20 2637154 2637154 1 + C T HNSC 2637157 + 2637137 2637177 41 CATCTCCCGATACCTGGCAAACAAATGCAGTATTGCCTCAC CATCTCCCGATACCTGGTAAACAAATGCAGTATTGCCTCAC < 41bp 1 0.789353682862531 1 0.079161673784256 experiment 0.421292634274938 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637157 chr20:2637154 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_40999 0 0 1 4 2637150 2637171 mRNA hsa-miR-200b NOP56 miRanda miRanda
14034 chr20 2637154 2637154 1 + C T HNSC 2637157 + 2637137 2637177 41 CATCTCCCGATACCTGGCAAACAAATGCAGTATTGCCTCAC CATCTCCCGATACCTGGTAAACAAATGCAGTATTGCCTCAC < 41bp 1 0.789353682862531 1 0.079161673784256 experiment 0.421292634274938 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637157 chr20:2637154 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_40999 0 0 1 4 2637149 2637171 mRNA hsa-miR-200c NOP56 miRanda miRanda
14034 chr20 2637154 2637154 1 + C T HNSC 2637157 + 2637137 2637177 41 CATCTCCCGATACCTGGCAAACAAATGCAGTATTGCCTCAC CATCTCCCGATACCTGGTAAACAAATGCAGTATTGCCTCAC < 41bp 1 0.789353682862531 1 0.079161673784256 experiment 0.421292634274938 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637157 chr20:2637154 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_40999 0 0 1 4 2637150 2637171 mRNA hsa-miR-429 NOP56 miRanda miRanda
14034 chrX 23803921 23803921 1 + G A HNSC 23803922 + 23803902 23803942 41 TCCAGTGAAGAGGGTTGGAGACTGTTCAAGATCGACAAGGA TCCAGTGAAGAGGGTTGGAAACTGTTCAAGATCGACAAGGA < 41bp 1 0.673377650729236 1 0.973082602024078 experiment 0.653244698541528 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803922 chrX:23803921 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41003 0 0 1 2 23803908 23803928 mRNA hsa-miR-212 SAT1 miRanda miRanda
14034 chrX 23803921 23803921 1 + G A HNSC 23803922 + 23803902 23803942 41 TCCAGTGAAGAGGGTTGGAGACTGTTCAAGATCGACAAGGA TCCAGTGAAGAGGGTTGGAAACTGTTCAAGATCGACAAGGA < 41bp 1 0.673377650729236 1 0.973082602024078 experiment 0.653244698541528 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803922 chrX:23803921 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41003 0 0 1 2 23803907 23803928 mRNA hsa-miR-132 SAT1 miRanda miRanda
14034 chr1 63836691 63836691 1 + C A HNSC 63836706 + 63836686 63836726 41 TAGGACTAACAGTACGATGGACAGTGTCTCTTAATTCTTAT TAGGAATAACAGTACGATGGACAGTGTCTCTTAATTCTTAT < 41bp 1 0.498580880976993 1 0.967844247817993 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836706 chr1:63836691 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_41020 0 0 1 1 63836681 63836704 mRNA hsa-miR-487b ALG6 miRanda miRanda
14034 chr15 51233943 51233943 1 + G C HNSC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTACAT < 41bp 1 0.780373301935952 1 0.268746614456177 experiment 0.439253396128096 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233943 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41039 0 0 0 7 51233925 51233944 mRNA hsa-miR-30a AP4E1 miRanda miRanda
14034 chr15 51233943 51233943 1 + G C HNSC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTACAT < 41bp 1 0.780373301935952 1 0.268746614456177 experiment 0.439253396128096 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233943 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41039 0 0 0 7 51233921 51233944 mRNA hsa-miR-30c AP4E1 miRanda miRanda
14034 chr15 51233943 51233943 1 + G C HNSC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTACAT < 41bp 1 0.780373301935952 1 0.268746614456177 experiment 0.439253396128096 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233943 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41039 0 0 0 7 51233923 51233944 mRNA hsa-miR-30d AP4E1 miRanda miRanda
14034 chr15 51233943 51233943 1 + G C HNSC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTACAT < 41bp 1 0.780373301935952 1 0.268746614456177 experiment 0.439253396128096 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233943 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41039 0 0 0 7 51233923 51233944 mRNA hsa-miR-30b AP4E1 miRanda miRanda
14034 chr15 51233943 51233943 1 + G C HNSC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTACAT < 41bp 1 0.780373301935952 1 0.268746614456177 experiment 0.439253396128096 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233943 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41039 0 0 0 7 51233922 51233944 mRNA hsa-miR-30e AP4E1 miRanda miRanda
14034 chr15 51233943 51233943 1 + G C HNSC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTACAT < 41bp 1 0.780373301935952 1 0.268746614456177 experiment 0.439253396128096 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233943 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41039 0 0 0 7 51233937 51233956 mRNA hsa-miR-383 AP4E1 miRanda miRanda
14034 chr15 51233943 51233943 1 + G C HNSC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTACAT < 41bp 1 0.780373301935952 1 0.268746614456177 experiment 0.439253396128096 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233943 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41039 0 0 0 7 51233922 51233943 mRNA hsa-miR-494 AP4E1 miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-302a MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-302b MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-302c MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-302d MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-372 MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-373 MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-520e MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-520a-3p MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-520b MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-520c-3p MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326545 1326563 mRNA hsa-miR-520d-3p MAEA miRanda miRanda
14034 chr4 1326563 1326563 1 + C A HNSC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTAAG < 41bp 1 0.697931585497843 1 0.774399280548096 experiment 0.604136829004313 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326563 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41069 0 0 1 12 1326547 1326563 mRNA hsa-miR-302e MAEA miRanda miRanda
14034 chr3 180327993 180327993 1 + G T HNSC 180328003 + 180327983 180328023 41 GAGCACTATAGAAGGTGGGAACCAGGTTCTGTGAGGCATTC GAGCACTATATAAGGTGGGAACCAGGTTCTGTGAGGCATTC < 41bp 1 0.488268868729163 1 0.0286931097507477 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 TTC14 ENSG00000163728 CDS Human protein_coding chr3:180328003 chr3:180327993 nonsynonymous SNV 0.970 4 hm6A_associated_SNPs_41110 0 0 1 1 180327990 180328011 mRNA hsa-miR-490-3p TTC14 miRanda miRanda
14034 chr16 24231346 24231346 1 + C A HNSC 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCACACTGATAAACTCTTCATCATGAACTTGGA < 41bp 1 0.464518546237326 1 0.971470475196838 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231346 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_41139 0 0 1 1 24231346 24231370 mRNA hsa-miR-433 PRKCB miRanda miRanda
14034 chr17 58734061 58734061 1 + C G HNSC 58734042 + 58734022 58734062 41 GCGTATGCTCCGAGCAGATAACACTAGTGCCATAGTAATCT GCGTATGCTCCGAGCAGATAACACTAGTGCCATAGTAATGT < 41bp 1 0.579758517037917 1 0.871173202991486 experiment 0.840482965924165 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58734042 chr17:58734061 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41153 0 0 1 1 58734053 58734073 mRNA hsa-miR-185 PPM1D miRanda miRanda
14034 chr11 121178029 121178029 1 + T C HNSC 121178031 + 121178011 121178051 41 AGACCACCATATGTTCTTTGACTATAATTATGGACAATATT AGACCACCATATGTTCTTCGACTATAATTATGGACAATATT Direct Loss 1 0.776814650330232 1 0.858272671699524 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 SC5D ENSG00000109929 CDS Human protein_coding chr11:121178031 chr11:121178029 synonymous SNV . 0 hm6A_associated_SNPs_41159 0 0 1 1 121178009 121178030 mRNA hsa-miR-186 SC5DL miRanda miRanda
14034 chr9 15447132 15447132 1 + G T HNSC 15447143 + 15447123 15447163 41 CTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTC CTGGTGTTGTGCAGTCAAAAACTCACACAACTGAGGGATTC < 41bp 1 0.429537948918289 1 0.0209332406520844 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 10 SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15447143 chr9:15447132 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_41168 0 0 1 1 15447115 15447137 mRNA hsa-miR-150 SNAPC3 miRanda miRanda
14034 chr11 65273243 65273243 1 + A G HNSC 65273263 + 65273243 65273283 41 ATTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG GTTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG < 41bp 1 0.474190086832769 1 0.727312326431274 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273263 chr11:65273243 . . 0 hm6A_associated_SNPs_41176 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374a-5p MALAT1 miRanda starBase2
14034 chr11 65273243 65273243 1 + A G HNSC 65273263 + 65273243 65273283 41 ATTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG GTTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG < 41bp 1 0.474190086832769 1 0.727312326431274 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273263 chr11:65273243 . . 0 hm6A_associated_SNPs_41176 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374b-5p MALAT1 miRanda starBase2
14034 chr6 88331187 88331187 1 + G A HNSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACATCTACCATCTT < 41bp 1 0.565807472136363 1 0.263609200716019 experiment 0.868385055727275 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331187 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_41207 0 0 1 7 88331176 88331197 mRNA hsa-let-7a ORC3L miRanda miRanda
14034 chr6 88331187 88331187 1 + G A HNSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACATCTACCATCTT < 41bp 1 0.565807472136363 1 0.263609200716019 experiment 0.868385055727275 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331187 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_41207 0 0 1 7 88331176 88331197 mRNA hsa-let-7b ORC3L miRanda miRanda
14034 chr6 88331187 88331187 1 + G A HNSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACATCTACCATCTT < 41bp 1 0.565807472136363 1 0.263609200716019 experiment 0.868385055727275 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331187 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_41207 0 0 1 7 88331176 88331197 mRNA hsa-let-7c ORC3L miRanda miRanda
14034 chr6 88331187 88331187 1 + G A HNSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACATCTACCATCTT < 41bp 1 0.565807472136363 1 0.263609200716019 experiment 0.868385055727275 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331187 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_41207 0 0 1 7 88331176 88331197 mRNA hsa-let-7d ORC3L miRanda miRanda
14034 chr6 88331187 88331187 1 + G A HNSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACATCTACCATCTT < 41bp 1 0.565807472136363 1 0.263609200716019 experiment 0.868385055727275 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331187 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_41207 0 0 1 7 88331176 88331197 mRNA hsa-let-7e ORC3L miRanda miRanda
14034 chr6 88331187 88331187 1 + G A HNSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACATCTACCATCTT < 41bp 1 0.565807472136363 1 0.263609200716019 experiment 0.868385055727275 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331187 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_41207 0 0 1 7 88331176 88331197 mRNA hsa-miR-98 ORC3L miRanda miRanda
14034 chr6 88331187 88331187 1 + G A HNSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACATCTACCATCTT < 41bp 1 0.565807472136363 1 0.263609200716019 experiment 0.868385055727275 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331187 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_41207 0 0 1 7 88331174 88331194 mRNA hsa-miR-379 ORC3L miRanda miRanda
14034 chr2 135893466 135893466 1 + G A HNSC 135893454 + 135893434 135893474 41 CGGCTCTATCAGCATGGGAAACTTACACTGCTGCATAATGG CGGCTCTATCAGCATGGGAAACTTACACTGCTACATAATGG < 41bp 1 0.338591998222383 1 0.783413767814636 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135893454 chr2:135893466 synonymous SNV . 0 hm6A_associated_SNPs_41237 0 0 1 1 135893454 135893477 mRNA hsa-miR-136 RAB3GAP1 miRanda miRanda
14034 chr11 65266557 65266557 1 + C T HNSC 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GGTAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT < 41bp 1 0.0428673370966155 1 0.498313754796982 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266557 . . 0 hm6A_associated_SNPs_41239 0 0 1 3 65266539 65266560 lncRNA hsa-miR-1913 MALAT1 miRanda starBase2
14034 chr11 65266557 65266557 1 + C T HNSC 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GGTAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT < 41bp 1 0.0428673370966155 1 0.498313754796982 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266557 . . 0 hm6A_associated_SNPs_41239 0 0 1 3 65266541 65266560 lncRNA hsa-miR-324-3p MALAT1 miRanda starBase2
14034 chr11 65266557 65266557 1 + C T HNSC 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GGTAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT < 41bp 1 0.0428673370966155 1 0.498313754796982 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266557 . . 0 hm6A_associated_SNPs_41239 0 0 1 3 65266555 65266575 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr15 79183867 79183867 1 + C T HNSC 79183861 + 79183841 79183881 41 ATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTCGGAAG ATGGTGGCAGTACCAGTGAGACCCCTTAGCCTCCTCGGAAG < 41bp 1 0.100821542089972 1 0.734478771686554 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 27 MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79183861 chr15:79183867 stopgain 0.992 1 hm6A_associated_SNPs_41270 0 0 1 1 79183853 79183874 mRNA hsa-miR-485-5p MORF4L1 miRanda miRanda
14034 chr2 27278818 27278818 1 + G A HNSC 27278815 + 27278795 27278835 41 ACGCTGAAGCCTGGAAACAAACAGAGCCAGCAGAACAGAAG ACGCTGAAGCCTGGAAACAAACAAAGCCAGCAGAACAGAAG < 41bp 1 0.757498721159757 1 0.927150309085846 experiment 0.485002557680486 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278815 chr2:27278818 nonsynonymous SNV 0.246 0 hm6A_associated_SNPs_41315 0 0 0 1 27278801 27278825 mRNA hsa-miR-149 AGBL5 miRanda miRanda
14034 chr6 142487415 142487415 1 + G A HNSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTAAATGTCGCAAATTT < 41bp 1 0.305359653008383 1 0.315700054168701 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487415 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_41342 0 0 1 6 142487393 142487421 mRNA hsa-miR-181a VTA1 miRanda miRanda
14034 chr6 142487415 142487415 1 + G A HNSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTAAATGTCGCAAATTT < 41bp 1 0.305359653008383 1 0.315700054168701 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487415 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_41342 0 0 1 6 142487393 142487421 mRNA hsa-miR-181b VTA1 miRanda miRanda
14034 chr6 142487415 142487415 1 + G A HNSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTAAATGTCGCAAATTT < 41bp 1 0.305359653008383 1 0.315700054168701 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487415 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_41342 0 0 1 6 142487400 142487421 mRNA hsa-miR-181c VTA1 miRanda miRanda
14034 chr6 142487415 142487415 1 + G A HNSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTAAATGTCGCAAATTT < 41bp 1 0.305359653008383 1 0.315700054168701 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487415 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_41342 0 0 1 6 142487406 142487427 mRNA hsa-miR-450a VTA1 miRanda miRanda
14034 chr6 142487415 142487415 1 + G A HNSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTAAATGTCGCAAATTT < 41bp 1 0.305359653008383 1 0.315700054168701 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487415 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_41342 0 0 1 6 142487393 142487421 mRNA hsa-miR-181d VTA1 miRanda miRanda
14034 chr6 142487415 142487415 1 + G A HNSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTAAATGTCGCAAATTT < 41bp 1 0.305359653008383 1 0.315700054168701 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487415 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_41342 0 0 1 6 142487405 142487426 mRNA hsa-miR-758 VTA1 miRanda miRanda
14034 chr19 9453078 9453078 1 + G A HNSC 9453060 + 9453040 9453080 41 GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGAGT < 41bp 1 0.493595541168436 1 0.980860114097595 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 39 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453060 chr19:9453078 synonymous SNV . 0 hm6A_associated_SNPs_41398 0 0 1 2 9453068 9453090 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453078 9453078 1 + G A HNSC 9453060 + 9453040 9453080 41 GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGAGT < 41bp 1 0.493595541168436 1 0.980860114097595 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 39 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453060 chr19:9453078 synonymous SNV . 0 hm6A_associated_SNPs_41398 0 0 1 2 9453067 9453090 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr1 46487694 46487694 1 + A C HNSC 46487684 + 46487664 46487704 41 GAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACAT GAGGGCCACGCCAAAGAGGGACAAGGGATTCAATGTGACAT < 41bp 1 0.525134281630685 1 0.937755167484283 experiment 0.94973143673863 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 MAST2 ENSG00000086015 CDS Human protein_coding chr1:46487684 chr1:46487694 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41416 0 0 0 2 46487682 46487702 mRNA hsa-miR-23a MAST2 miRanda miRanda
14034 chr1 46487694 46487694 1 + A C HNSC 46487684 + 46487664 46487704 41 GAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACAT GAGGGCCACGCCAAAGAGGGACAAGGGATTCAATGTGACAT < 41bp 1 0.525134281630685 1 0.937755167484283 experiment 0.94973143673863 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 MAST2 ENSG00000086015 CDS Human protein_coding chr1:46487684 chr1:46487694 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41416 0 0 0 2 46487682 46487702 mRNA hsa-miR-23b MAST2 miRanda miRanda
14034 chr11 120957788 120957788 1 + G C HNSC 120957805 + 120957785 120957825 41 GTGGAATCCAAAACAAAATAACCTCTACCAGCCTTGTGAAA GTGCAATCCAAAACAAAATAACCTCTACCAGCCTTGTGAAA < 41bp 1 0.460840340026954 1 0.937866508960724 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 4 TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957805 chr11:120957788 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41441 0 0 1 1 120957787 120957809 mRNA hsa-miR-154 TBCEL miRanda miRanda
14034 chr12 69986801 69986801 1 + G C HNSC 69986781 + 69986761 69986801 41 TGGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAG TGGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAC < 41bp 1 0.302329043684546 1 0.928848564624786 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69986781 chr12:69986801 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_41481 0 0 1 1 69986783 69986804 mRNA hsa-miR-544 CCT2 miRanda miRanda
14034 chr6 149719163 149719163 1 + G A HNSC 149719154 + 149719134 149719174 41 TAATAGACAACTCCAGATTGACATTGACTGCTTAACCAAAG TAATAGACAACTCCAGATTGACATTGACTACTTAACCAAAG < 41bp 1 0.791818949045986 1 0.910401344299316 experiment 0.416362101908027 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 30 TAB2 ENSG00000055208 CDS Human protein_coding chr6:149719154 chr6:149719163 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41484 0 0 1 3 149719144 149719166 mRNA hsa-miR-16 TAB2 miRanda miRanda
14034 chr6 149719163 149719163 1 + G A HNSC 149719154 + 149719134 149719174 41 TAATAGACAACTCCAGATTGACATTGACTGCTTAACCAAAG TAATAGACAACTCCAGATTGACATTGACTACTTAACCAAAG < 41bp 1 0.791818949045986 1 0.910401344299316 experiment 0.416362101908027 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 30 TAB2 ENSG00000055208 CDS Human protein_coding chr6:149719154 chr6:149719163 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41484 0 0 1 3 149719152 149719175 mRNA hsa-miR-9 TAB2 miRanda miRanda
14034 chr6 149719163 149719163 1 + G A HNSC 149719154 + 149719134 149719174 41 TAATAGACAACTCCAGATTGACATTGACTGCTTAACCAAAG TAATAGACAACTCCAGATTGACATTGACTACTTAACCAAAG < 41bp 1 0.791818949045986 1 0.910401344299316 experiment 0.416362101908027 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 30 TAB2 ENSG00000055208 CDS Human protein_coding chr6:149719154 chr6:149719163 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41484 0 0 1 3 149719144 149719166 mRNA hsa-miR-424 TAB2 miRanda miRanda
14034 chr6 161530868 161530868 1 + A G HNSC 161530861 + 161530841 161530881 41 TCAAGGCTGGGACTTCAGGAACATGTGATTAGGCTGTATTC TCAAGGCTGGGACTTCAGGAACATGTGGTTAGGCTGTATTC < 41bp 1 0.673731887729289 1 0.855558037757874 experiment 0.652536224541422 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530861 chr6:161530868 nonsynonymous SNV 0.963 3 hm6A_associated_SNPs_41559 0 0 1 2 161530847 161530869 mRNA hsa-miR-27a MAP3K4 miRanda miRanda
14034 chr6 161530868 161530868 1 + A G HNSC 161530861 + 161530841 161530881 41 TCAAGGCTGGGACTTCAGGAACATGTGATTAGGCTGTATTC TCAAGGCTGGGACTTCAGGAACATGTGGTTAGGCTGTATTC < 41bp 1 0.673731887729289 1 0.855558037757874 experiment 0.652536224541422 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530861 chr6:161530868 nonsynonymous SNV 0.963 3 hm6A_associated_SNPs_41559 0 0 1 2 161530847 161530869 mRNA hsa-miR-27b MAP3K4 miRanda miRanda
14034 chr4 74277775 74277775 1 + T A HNSC 74277777 + 74277757 74277797 41 CAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCAC CAGAAGTTTCCAAGTTAGAGACAGATCTTACCAAAGTCCAC < 41bp 1 0.291474069412623 1 0.272705852985382 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 19 ALB ENSG00000163631 CDS Human protein_coding chr4:74277777 chr4:74277775 nonsynonymous SNV 0.460 3 hm6A_associated_SNPs_41645 0 0 1 1 74277773 74277793 mRNA hsa-miR-9 ALB miRanda miRanda
14034 chrX 149809804 149809804 1 + T C HNSC 149809800 + 149809780 149809820 41 TAAGTGCTATGAGCTCTGTGACACTTACCCTGCTCTTTTGG TAAGTGCTATGAGCTCTGTGACACCTACCCTGCTCTTTTGG < 41bp 1 0.505939623235353 1 0.811488509178162 experiment 0.988120753529294 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149809800 chrX:149809804 synonymous SNV . 0 hm6A_associated_SNPs_41651 0 0 0 1 149809785 149809808 mRNA hsa-miR-142-3p MTM1 miRanda miRanda
14034 chr17 16342902 16342902 1 + A G HNSC 16342921 + 16342901 16342941 41 AAACCTCTACAACTTAGTTGACCGTAACTGCCAGAGCCCTG AGACCTCTACAACTTAGTTGACCGTAACTGCCAGAGCCCTG < 41bp 1 0.0496604610248283 1 0.870777010917664 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342921 chr17:16342902 . . 0 hm6A_associated_SNPs_41654 0 0 1 1 16342896 16342916 mRNA hsa-miR-382 NCRNA00188 miRanda miRanda
14034 chr16 58043902 58043902 1 + G A HNSC 58043889 + 58043869 58043909 41 TGTTGCTGCCCCATGCCCAGACATATGTCCCCCGGCTGGTA TGTTGCTGCCCCATGCCCAGACATATGTCCCCCAGCTGGTA < 41bp 1 0.779172626858313 1 0.665152549743652 experiment 0.441654746283374 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 34 USB1 ENSG00000103005 CDS Human protein_coding chr16:58043889 chr16:58043902 nonsynonymous SNV 0.363 1 hm6A_associated_SNPs_41664 0 0 1 1 58043898 58043920 mRNA hsa-miR-205 C16orf57 miRanda miRanda
14034 chr3 160120573 160120573 1 + C A HNSC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCTAAGTATTAATACATAA < 41bp 1 0.321485076065254 1 0.945673704147339 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 26 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120573 stopgain 0.993 1 hm6A_associated_SNPs_41668 0 0 1 3 160120559 160120580 mRNA hsa-miR-200b SMC4 miRanda miRanda
14034 chr3 160120573 160120573 1 + C A HNSC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCTAAGTATTAATACATAA < 41bp 1 0.321485076065254 1 0.945673704147339 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 26 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120573 stopgain 0.993 1 hm6A_associated_SNPs_41668 0 0 1 3 160120559 160120580 mRNA hsa-miR-200c SMC4 miRanda miRanda
14034 chr3 160120573 160120573 1 + C A HNSC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCTAAGTATTAATACATAA < 41bp 1 0.321485076065254 1 0.945673704147339 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 26 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120573 stopgain 0.993 1 hm6A_associated_SNPs_41668 0 0 1 3 160120559 160120580 mRNA hsa-miR-429 SMC4 miRanda miRanda
14034 chr5 56545266 56545266 1 + G A KICH 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTAACAAACTTAATCAGCAGCCTCGTCT < 41bp 1 0.430666208264687 1 0.226050972938538 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545266 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_41713 0 0 1 2 56545248 56545269 mRNA hsa-miR-505 GPBP1 miRanda miRanda
14034 chr5 56545266 56545266 1 + G A KICH 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTAACAAACTTAATCAGCAGCCTCGTCT < 41bp 1 0.430666208264687 1 0.226050972938538 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545266 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_41713 0 0 1 2 56545241 56545268 mRNA hsa-miR-421 GPBP1 miRanda miRanda
14034 chr2 71653715 71653715 1 + T A KICH 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTACCTTTC < 41bp 1 0.72529012140437 1 0.9967001080513 experiment 0.54941975719126 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 35 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653715 synonymous SNV . 0 hm6A_associated_SNPs_41717 0 0 1 2 71653703 71653723 mRNA hsa-miR-488 ZNF638 miRanda miRanda
14034 chr2 71653715 71653715 1 + T A KICH 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTACCTTTC < 41bp 1 0.72529012140437 1 0.9967001080513 experiment 0.54941975719126 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 35 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653715 synonymous SNV . 0 hm6A_associated_SNPs_41717 0 0 1 2 71653695 71653716 mRNA hsa-miR-543 ZNF638 miRanda miRanda
14034 chr17 2228035 2228035 1 + A G KICH 2228041 + 2228021 2228061 41 GTAAAAATTTTGAAAGGATGACCACTCAGAACAACTCTCTT GTAAAAATTTTGAAGGGATGACCACTCAGAACAACTCTCTT < 41bp 1 0.545771289261071 1 0.817198991775513 experiment 0.908457421477858 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 15 TSR1 ENSG00000167721 CDS Human protein_coding chr17:2228041 chr17:2228035 synonymous SNV . 0 hm6A_associated_SNPs_41718 0 0 1 1 2228028 2228047 mRNA hsa-miR-140-5p SRR miRanda miRanda
14034 chr15 58004276 58004276 1 + C T KICH 58004283 + 58004263 58004303 41 GGATAAGCAGCATCTTGATGACATCACAGCAGCTCGGCTTC GGATAAGCAGCATTTTGATGACATCACAGCAGCTCGGCTTC < 41bp 1 0.653445503161412 1 0.368238031864166 experiment 0.693108993677177 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58004283 chr15:58004276 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_41759 0 0 0 2 58004255 58004279 mRNA hsa-miR-372 GCOM1 miRanda miRanda
14034 chr15 58004276 58004276 1 + C T KICH 58004283 + 58004263 58004303 41 GGATAAGCAGCATCTTGATGACATCACAGCAGCTCGGCTTC GGATAAGCAGCATTTTGATGACATCACAGCAGCTCGGCTTC < 41bp 1 0.653445503161412 1 0.368238031864166 experiment 0.693108993677177 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58004283 chr15:58004276 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_41759 0 0 0 2 58004255 58004279 mRNA hsa-miR-372 GRINL1A miRanda miRanda
14034 chr11 76917244 76917244 1 + C G KICH 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGACACTGAGGAGGTGAGGGTCA < 41bp 1 0.184865355991348 1 0.807352066040039 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917244 nonsynonymous SNV 0.367 2 hm6A_associated_SNPs_41770 0 0 0 2 76917223 76917245 mRNA hsa-miR-223 MYO7A miRanda miRanda
14034 chr11 76917244 76917244 1 + C G KICH 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTGATGACACTGAGGAGGTGAGGGTCA < 41bp 1 0.184865355991348 1 0.807352066040039 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917244 nonsynonymous SNV 0.367 2 hm6A_associated_SNPs_41770 0 0 0 2 76917234 76917247 mRNA hsa-miR-873 MYO7A miRanda miRanda
14034 chr3 38565749 38565749 1 + G A KICH 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATACAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.784551640068204 1 0.989948928356171 experiment 0.430896719863593 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565749 nonsynonymous SNV 0.385 1 hm6A_associated_SNPs_41776 0 0 1 5 38565732 38565752 mRNA hsa-miR-33a EXOG miRanda miRanda
14034 chr3 38565749 38565749 1 + G A KICH 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATACAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.784551640068204 1 0.989948928356171 experiment 0.430896719863593 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565749 nonsynonymous SNV 0.385 1 hm6A_associated_SNPs_41776 0 0 1 5 38565732 38565754 mRNA hsa-miR-217 EXOG miRanda miRanda
14034 chr3 38565749 38565749 1 + G A KICH 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATACAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.784551640068204 1 0.989948928356171 experiment 0.430896719863593 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565749 nonsynonymous SNV 0.385 1 hm6A_associated_SNPs_41776 0 0 1 5 38565736 38565755 mRNA hsa-miR-544 EXOG miRanda miRanda
14034 chr3 38565749 38565749 1 + G A KICH 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATACAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.784551640068204 1 0.989948928356171 experiment 0.430896719863593 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565749 nonsynonymous SNV 0.385 1 hm6A_associated_SNPs_41776 0 0 1 5 38565733 38565752 mRNA hsa-miR-33b EXOG miRanda miRanda
14034 chr3 38565749 38565749 1 + G A KICH 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAAGAATACAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.784551640068204 1 0.989948928356171 experiment 0.430896719863593 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565749 nonsynonymous SNV 0.385 1 hm6A_associated_SNPs_41776 0 0 1 5 38565737 38565758 mRNA hsa-miR-216b EXOG miRanda miRanda
14034 chr6 137147498 137147498 1 + A G KICH 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTGACTTGGAGTGGGAACAACGAACATGTCCTCATCA < 41bp 1 0.7222717704616 1 0.0339102149009705 experiment 0.5554564590768 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147498 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41781 0 0 1 1 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chr6 137147498 137147498 1 + A G KICH 137147508 + 137147488 137147528 41 ACTTGGAGTGAGAACAACGAACATGTCCTCATCACCTGTAG ACTTGGAGTGGGAACAACGAACATGTCCTCATCACCTGTAG < 41bp 1 0.752522106741657 1 0.0882467031478882 experiment 0.494955786516686 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147508 chr6:137147498 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41782 0 0 1 1 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chr5 76332468 76332468 1 + G T KIRC 76332477 + 76332457 76332497 41 CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATGAA CAGAAGCGGCTTTATCACAGACTGGATTTAGTTATGATGAA < 41bp 1 0.470314147229674 1 0.959213733673096 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 12 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332477 chr5:76332468 nonsynonymous SNV 0.982 2 hm6A_associated_SNPs_41829 0 0 1 1 76332461 76332483 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr3 152018067 152018067 1 + C T KIRC 152018058 + 152018038 152018078 41 GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACACG GTAGAGAGTTCCAGAGGGGGACTTGCTCATGGCCAGACACG < 41bp 1 0.509600182779097 1 0.910228610038757 experiment 0.980799634441806 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018058 chr3:152018067 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41868 0 0 1 1 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr3 152018067 152018067 1 + C T KIRC 152018074 + 152018054 152018094 41 GGGGACTTGCTCACGGCCAGACACGGAATGTAAATTTGCAC GGGGACTTGCTCATGGCCAGACACGGAATGTAAATTTGCAC < 41bp 1 0.687739648337665 1 0.840185105800629 experiment 0.62452070332467 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 14 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018074 chr3:152018067 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41869 0 0 1 1 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr1 203276485 203276485 1 + T A KIRC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA AGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.65482616748456 1 0.996748924255371 experiment 0.690347665030881 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 1 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276485 stopgain 0.994 0 hm6A_associated_SNPs_41887 0 0 1 1 203276477 203276500 mRNA hsa-miR-125a-3p BTG2 miRanda miRanda
14034 chr2 85768975 85768975 1 + T C KIRC 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACCGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.208410057129936 1 0.939536809921265 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768975 synonymous SNV . 0 hm6A_associated_SNPs_41891 0 0 1 5 85768960 85768981 mRNA hsa-miR-27a MAT2A miRanda miRanda
14034 chr2 85768975 85768975 1 + T C KIRC 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACCGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.208410057129936 1 0.939536809921265 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768975 synonymous SNV . 0 hm6A_associated_SNPs_41891 0 0 1 5 85768955 85768977 mRNA hsa-miR-148a MAT2A miRanda miRanda
14034 chr2 85768975 85768975 1 + T C KIRC 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACCGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.208410057129936 1 0.939536809921265 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768975 synonymous SNV . 0 hm6A_associated_SNPs_41891 0 0 1 5 85768960 85768981 mRNA hsa-miR-27b MAT2A miRanda miRanda
14034 chr2 85768975 85768975 1 + T C KIRC 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACCGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.208410057129936 1 0.939536809921265 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768975 synonymous SNV . 0 hm6A_associated_SNPs_41891 0 0 1 5 85768956 85768977 mRNA hsa-miR-152 MAT2A miRanda miRanda
14034 chr2 85768975 85768975 1 + T C KIRC 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACCGATGAAACTGAGGAGTGTATGCCTTTA < 41bp 1 0.208410057129936 1 0.939536809921265 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768975 synonymous SNV . 0 hm6A_associated_SNPs_41891 0 0 1 5 85768955 85768977 mRNA hsa-miR-148b MAT2A miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676214 95676240 mRNA hsa-let-7a VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676220 95676240 mRNA hsa-let-7b VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676215 95676240 mRNA hsa-let-7c VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676214 95676240 mRNA hsa-let-7d VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676220 95676240 mRNA hsa-let-7e VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676214 95676240 mRNA hsa-let-7f VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676215 95676240 mRNA hsa-miR-98 VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676220 95676240 mRNA hsa-let-7g VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676220 95676240 mRNA hsa-let-7i VEZT miRanda miRanda
14034 chr12 95676229 95676229 1 + A G KIRC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAGGGTCTACCTCATGCT < 41bp 1 0.356434015058014 1 0.0989788174629211 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676229 synonymous SNV . 0 hm6A_associated_SNPs_41895 0 0 1 10 95676218 95676238 mRNA hsa-miR-379 VEZT miRanda miRanda
14034 chrX 114864223 114864223 1 + A G KIRC 114864234 + 114864214 114864254 41 TGTTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG TGTTATACCGATGAACCCTAACACCGATGACCTGTTCAAAG < 41bp 1 0.395011158515093 1 0.190998911857605 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114864234 chrX:114864223 synonymous SNV . 0 hm6A_associated_SNPs_41906 0 0 1 1 114864212 114864233 mRNA hsa-miR-296-3p PLS3 miRanda miRanda
14034 chr7 151791383 151791383 1 + T A KIRC 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGCATTTTGTTTAT < 41bp 1 0.781177011839913 1 0.959050536155701 experiment 0.437645976320173 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791383 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41931 0 0 1 7 151791373 151791394 mRNA hsa-miR-30a GALNT11 miRanda miRanda
14034 chr7 151791383 151791383 1 + T A KIRC 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGCATTTTGTTTAT < 41bp 1 0.781177011839913 1 0.959050536155701 experiment 0.437645976320173 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791383 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41931 0 0 1 7 151791369 151791394 mRNA hsa-miR-30c GALNT11 miRanda miRanda
14034 chr7 151791383 151791383 1 + T A KIRC 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGCATTTTGTTTAT < 41bp 1 0.781177011839913 1 0.959050536155701 experiment 0.437645976320173 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791383 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41931 0 0 1 7 151791373 151791394 mRNA hsa-miR-30d GALNT11 miRanda miRanda
14034 chr7 151791383 151791383 1 + T A KIRC 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGCATTTTGTTTAT < 41bp 1 0.781177011839913 1 0.959050536155701 experiment 0.437645976320173 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791383 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41931 0 0 1 7 151791377 151791398 mRNA hsa-miR-203 GALNT11 miRanda miRanda
14034 chr7 151791383 151791383 1 + T A KIRC 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGCATTTTGTTTAT < 41bp 1 0.781177011839913 1 0.959050536155701 experiment 0.437645976320173 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791383 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41931 0 0 1 7 151791373 151791394 mRNA hsa-miR-30b GALNT11 miRanda miRanda
14034 chr7 151791383 151791383 1 + T A KIRC 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGCATTTTGTTTAT < 41bp 1 0.781177011839913 1 0.959050536155701 experiment 0.437645976320173 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791383 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41931 0 0 1 7 151791373 151791394 mRNA hsa-miR-30e GALNT11 miRanda miRanda
14034 chr7 151791383 151791383 1 + T A KIRC 151791373 + 151791353 151791393 41 TTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTAT TTTTTACATCTGCGACCTGGACAGTTTTGCATTTTGTTTAT < 41bp 1 0.781177011839913 1 0.959050536155701 experiment 0.437645976320173 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791373 chr7:151791383 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41931 0 0 1 7 151791381 151791402 mRNA hsa-miR-382 GALNT11 miRanda miRanda
14034 chr2 71299785 71299785 1 + A G KIRC 71299794 + 71299774 71299814 41 GAGTTGTGCTCATATCTGGAACAGGCTCCAACTGCAGGCTC GAGTTGTGCTCGTATCTGGAACAGGCTCCAACTGCAGGCTC < 41bp 1 0.448638679143419 1 0.142929077148438 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 12 NAGK ENSG00000124357 CDS Human protein_coding chr2:71299794 chr2:71299785 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_41944 0 0 1 1 71299771 71299787 mRNA hsa-miR-425 NAGK miRanda miRanda
14034 chr5 96101010 96101010 1 + C A KIRC 96101004 + 96100984 96101024 41 GCAGCCTGACCCAGATGAGAACAAACCAATGGAAGATAAAG GCAGCCTGACCCAGATGAGAACAAACAAATGGAAGATAAAG < 41bp 1 0.548882559433869 1 0.916831195354462 experiment 0.902234881132263 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 CAST ENSG00000153113 CDS Human protein_coding chr5:96101004 chr5:96101010 nonsynonymous SNV 0.974 4 hm6A_associated_SNPs_41968 0 0 1 3 96101010 96101029 mRNA hsa-miR-211 CAST miRanda miRanda
14034 chr5 96101010 96101010 1 + C A KIRC 96101004 + 96100984 96101024 41 GCAGCCTGACCCAGATGAGAACAAACCAATGGAAGATAAAG GCAGCCTGACCCAGATGAGAACAAACAAATGGAAGATAAAG < 41bp 1 0.548882559433869 1 0.916831195354462 experiment 0.902234881132263 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 CAST ENSG00000153113 CDS Human protein_coding chr5:96101004 chr5:96101010 nonsynonymous SNV 0.974 4 hm6A_associated_SNPs_41968 0 0 1 3 96100995 96101018 mRNA hsa-miR-136 CAST miRanda miRanda
14034 chr5 96101010 96101010 1 + C A KIRC 96101004 + 96100984 96101024 41 GCAGCCTGACCCAGATGAGAACAAACCAATGGAAGATAAAG GCAGCCTGACCCAGATGAGAACAAACAAATGGAAGATAAAG < 41bp 1 0.548882559433869 1 0.916831195354462 experiment 0.902234881132263 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 CAST ENSG00000153113 CDS Human protein_coding chr5:96101004 chr5:96101010 nonsynonymous SNV 0.974 4 hm6A_associated_SNPs_41968 0 0 1 3 96101009 96101029 mRNA hsa-miR-486-5p CAST miRanda miRanda
14034 chr5 96101010 96101010 1 + C A KIRC 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAACAAATGGAAGATAAAGTAAA < 41bp 1 0.489407402814794 1 0.847882390022278 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101010 nonsynonymous SNV 0.974 4 hm6A_associated_SNPs_41969 0 0 1 3 96101010 96101029 mRNA hsa-miR-211 CAST miRanda miRanda
14034 chr5 96101010 96101010 1 + C A KIRC 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAACAAATGGAAGATAAAGTAAA < 41bp 1 0.489407402814794 1 0.847882390022278 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101010 nonsynonymous SNV 0.974 4 hm6A_associated_SNPs_41969 0 0 1 3 96100995 96101018 mRNA hsa-miR-136 CAST miRanda miRanda
14034 chr5 96101010 96101010 1 + C A KIRC 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAACAAATGGAAGATAAAGTAAA < 41bp 1 0.489407402814794 1 0.847882390022278 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101010 nonsynonymous SNV 0.974 4 hm6A_associated_SNPs_41969 0 0 1 3 96101009 96101029 mRNA hsa-miR-486-5p CAST miRanda miRanda
14034 chr19 21299777 21299777 1 + G A KIRC 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATAAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.710392482880079 1 0.832524240016937 experiment 0.579215034239841 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299777 nonsynonymous SNV 0.002 0 hm6A_associated_SNPs_41998 0 0 0 3 21299771 21299793 mRNA hsa-miR-141 ZNF714 miRanda miRanda
14034 chr19 21299777 21299777 1 + G A KIRC 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATAAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.710392482880079 1 0.832524240016937 experiment 0.579215034239841 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299777 nonsynonymous SNV 0.002 0 hm6A_associated_SNPs_41998 0 0 0 3 21299771 21299793 mRNA hsa-miR-200a ZNF714 miRanda miRanda
14034 chr19 21299777 21299777 1 + G A KIRC 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATAAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.710392482880079 1 0.832524240016937 experiment 0.579215034239841 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299777 nonsynonymous SNV 0.002 0 hm6A_associated_SNPs_41998 0 0 0 3 21299775 21299797 mRNA hsa-miR-505 ZNF714 miRanda miRanda
14034 chr19 55899365 55899365 1 + C G KIRC 55899374 + 55899354 55899394 41 GCCACGCTCAGCAGCATCAGACACATGATCCGCAAGAACAA GCCACGCTCAGGAGCATCAGACACATGATCCGCAAGAACAA < 41bp 1 0.74495851812673 1 0.972973465919495 experiment 0.510082963746541 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 12 RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899374 chr19:55899365 nonsynonymous SNV 0.949 0 hm6A_associated_SNPs_42002 0 0 1 1 55899361 55899384 mRNA hsa-miR-190b RPL28 miRanda miRanda
14034 chr8 124096435 124096435 1 + A C KIRC 124096433 + 124096413 124096453 41 CTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTC CTAGTTAGCTGGATGAGAGGACCTGAATCATCAGTATTTTC < 41bp 1 0.105024524948879 1 0.251775085926056 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124096433 chr8:124096435 nonsynonymous SNV 0.902 4 hm6A_associated_SNPs_42008 0 0 1 3 124096430 124096451 mRNA hsa-miR-200b WDR67 miRanda miRanda
14034 chr8 124096435 124096435 1 + A C KIRC 124096433 + 124096413 124096453 41 CTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTC CTAGTTAGCTGGATGAGAGGACCTGAATCATCAGTATTTTC < 41bp 1 0.105024524948879 1 0.251775085926056 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124096433 chr8:124096435 nonsynonymous SNV 0.902 4 hm6A_associated_SNPs_42008 0 0 1 3 124096429 124096451 mRNA hsa-miR-200c WDR67 miRanda miRanda
14034 chr8 124096435 124096435 1 + A C KIRC 124096433 + 124096413 124096453 41 CTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTC CTAGTTAGCTGGATGAGAGGACCTGAATCATCAGTATTTTC < 41bp 1 0.105024524948879 1 0.251775085926056 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124096433 chr8:124096435 nonsynonymous SNV 0.902 4 hm6A_associated_SNPs_42008 0 0 1 3 124096431 124096451 mRNA hsa-miR-429 WDR67 miRanda miRanda
14034 chr11 62650443 62650443 1 + A G KIRC 62650449 + 62650429 62650469 41 GTGGTTCTCCACTCAGGTTGACACTGTGGCCACCAAGGTGA GTGGTTCTCCACTCGGGTTGACACTGTGGCCACCAAGGTGA < 41bp 1 0.300332304057514 1 0.0496370494365692 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62650449 chr11:62650443 nonsynonymous SNV 0.039 1 hm6A_associated_SNPs_42034 0 0 1 1 62650435 62650457 mRNA hsa-miR-128 SLC3A2 miRanda miRanda
14034 chr6 42626515 42626515 1 + G T KIRC 42626519 + 42626499 42626539 41 ACAAAGAACTCTTTCAGCAGACATTAGAACTGGATGCCTCA ACAAAGAACTCTTTCATCAGACATTAGAACTGGATGCCTCA < 41bp 1 0.773279702901644 1 0.921793937683105 experiment 0.453440594196711 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 17 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42626519 chr6:42626515 nonsynonymous SNV 0.965 4 hm6A_associated_SNPs_42064 0 0 1 1 42626511 42626533 mRNA hsa-miR-145 UBR2 miRanda miRanda
14034 chr6 42626515 42626515 1 + G T KIRC 42626527 + 42626507 42626547 41 CTCTTTCAGCAGACATTAGAACTGGATGCCTCAACCTCTGC CTCTTTCATCAGACATTAGAACTGGATGCCTCAACCTCTGC < 41bp 1 0.214758773108728 1 0.909809708595276 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42626527 chr6:42626515 nonsynonymous SNV 0.965 4 hm6A_associated_SNPs_42065 0 0 1 1 42626511 42626533 mRNA hsa-miR-145 UBR2 miRanda miRanda
14034 chr20 44521889 44521889 1 + T G KIRC 44521902 + 44521882 44521922 41 CTCCTCCTATGAGCAGAATGACAACTCCCTGGTCTACTTTG CTCCTCCGATGAGCAGAATGACAACTCCCTGGTCTACTTTG < 41bp 1 0.679881002824218 1 0.00326836109161377 experiment 0.640237994351564 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 CTSA ENSG00000064601 CDS Human protein_coding chr20:44521902 chr20:44521889 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_42084 0 0 1 2 44521873 44521894 mRNA hsa-miR-376a CTSA miRanda miRanda
14034 chr20 44521889 44521889 1 + T G KIRC 44521902 + 44521882 44521922 41 CTCCTCCTATGAGCAGAATGACAACTCCCTGGTCTACTTTG CTCCTCCGATGAGCAGAATGACAACTCCCTGGTCTACTTTG < 41bp 1 0.679881002824218 1 0.00326836109161377 experiment 0.640237994351564 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 8 CTSA ENSG00000064601 CDS Human protein_coding chr20:44521902 chr20:44521889 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_42084 0 0 1 2 44521872 44521894 mRNA hsa-miR-376b CTSA miRanda miRanda
14034 chr1 236969470 236969470 1 + C T KIRC 236969477 + 236969457 236969497 41 CTGGGGCAGATATCATTGAAACAAATACTTTTAGCAGCACT CTGGGGCAGATATTATTGAAACAAATACTTTTAGCAGCACT < 41bp 1 0.570383952400983 1 0.0363149642944336 experiment 0.859232095198033 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 MTR ENSG00000116984 CDS Human protein_coding chr1:236969477 chr1:236969470 synonymous SNV . 0 hm6A_associated_SNPs_42090 0 0 1 3 236969469 236969499 mRNA hsa-miR-302c MTR miRanda miRanda
14034 chr1 236969470 236969470 1 + C T KIRC 236969477 + 236969457 236969497 41 CTGGGGCAGATATCATTGAAACAAATACTTTTAGCAGCACT CTGGGGCAGATATTATTGAAACAAATACTTTTAGCAGCACT < 41bp 1 0.570383952400983 1 0.0363149642944336 experiment 0.859232095198033 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 MTR ENSG00000116984 CDS Human protein_coding chr1:236969477 chr1:236969470 synonymous SNV . 0 hm6A_associated_SNPs_42090 0 0 1 3 236969466 236969487 mRNA hsa-miR-496 MTR miRanda miRanda
14034 chr1 236969470 236969470 1 + C T KIRC 236969477 + 236969457 236969497 41 CTGGGGCAGATATCATTGAAACAAATACTTTTAGCAGCACT CTGGGGCAGATATTATTGAAACAAATACTTTTAGCAGCACT < 41bp 1 0.570383952400983 1 0.0363149642944336 experiment 0.859232095198033 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 MTR ENSG00000116984 CDS Human protein_coding chr1:236969477 chr1:236969470 synonymous SNV . 0 hm6A_associated_SNPs_42090 0 0 1 3 236969461 236969481 mRNA hsa-miR-599 MTR miRanda miRanda
14034 chr18 2732468 2732468 1 + C A KIRC 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATAAGCTTTAGCAGAAAAA < 41bp 1 0.490310936755279 1 0.0406234264373779 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732468 stopgain 0.978 0 hm6A_associated_SNPs_42106 0 0 1 4 2732453 2732475 mRNA hsa-miR-320a SMCHD1 miRanda miRanda
14034 chr18 2732468 2732468 1 + C A KIRC 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATAAGCTTTAGCAGAAAAA < 41bp 1 0.490310936755279 1 0.0406234264373779 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732468 stopgain 0.978 0 hm6A_associated_SNPs_42106 0 0 1 4 2732453 2732475 mRNA hsa-miR-320b SMCHD1 miRanda miRanda
14034 chr18 2732468 2732468 1 + C A KIRC 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATAAGCTTTAGCAGAAAAA < 41bp 1 0.490310936755279 1 0.0406234264373779 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732468 stopgain 0.978 0 hm6A_associated_SNPs_42106 0 0 1 4 2732455 2732475 mRNA hsa-miR-320c SMCHD1 miRanda miRanda
14034 chr18 2732468 2732468 1 + C A KIRC 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATAAGCTTTAGCAGAAAAA < 41bp 1 0.490310936755279 1 0.0406234264373779 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732468 stopgain 0.978 0 hm6A_associated_SNPs_42106 0 0 1 4 2732456 2732475 mRNA hsa-miR-320d SMCHD1 miRanda miRanda
14034 chr20 44521907 44521907 1 + T C KIRC 44521902 + 44521882 44521922 41 CTCCTCCTATGAGCAGAATGACAACTCCCTGGTCTACTTTG CTCCTCCTATGAGCAGAATGACAACCCCCTGGTCTACTTTG < 41bp 1 0.676512342105307 1 0.00125187635421753 experiment 0.646975315789386 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 26 CTSA ENSG00000064601 CDS Human protein_coding chr20:44521902 chr20:44521907 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_42110 0 0 1 1 44521900 44521920 mRNA hsa-miR-411 CTSA miRanda miRanda
14034 chr1 33292267 33292267 1 + T G KIRC 33292276 + 33292256 33292296 41 CTTAGCCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGG CTTAGCCCAAAGGAAAGCAAACTTTGTACTGAATCTGAAGG < 41bp 1 0.759144425639271 1 0.994736969470978 experiment 0.481711148721458 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292276 chr1:33292267 nonsynonymous SNV 0.700 0 hm6A_associated_SNPs_42118 0 0 1 1 33292257 33292280 mRNA hsa-miR-520a-3p S100PBP miRanda miRanda
14034 chr22 35719146 35719146 1 + T C KIRC 35719148 + 35719128 35719168 41 CCCACCCACCATCGTGCATGACAAAGTGCTCAACCTCATCC CCCACCCACCATCGTGCACGACAAAGTGCTCAACCTCATCC Direct Loss 1 0.618491914102148 1 0.910427987575531 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719148 chr22:35719146 stoploss . 0 hm6A_associated_SNPs_42159 0 0 1 1 35719138 35719161 mRNA hsa-miR-1271 TOM1 miRanda miRanda
14034 chr1 169773348 169773348 1 + G C KIRC 169773352 + 169773332 169773372 41 CATGGACCCTTTAGTAGATGACAATGATGATATTTTGAATA CATGGACCCTTTAGTACATGACAATGATGATATTTTGAATA < 41bp 1 0.65237422749633 1 0.434971153736115 experiment 0.695251545007339 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 C1orf112 ENSG00000000460 CDS Human protein_coding chr1:169773352 chr1:169773348 nonsynonymous SNV 0.812 0 hm6A_associated_SNPs_42172 0 0 1 1 169773341 169773362 mRNA hsa-miR-23b C1orf112 miRanda miRanda
14034 chr2 61413601 61413601 1 + C G KIRC 61413584 + 61413564 61413604 41 TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATG TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATGATG < 41bp 1 0.434671873722452 1 0.838131904602051 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413584 chr2:61413601 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_42201 0 0 1 2 61413593 61413613 mRNA hsa-miR-136 AHSA2 miRanda miRanda
14034 chr2 61413601 61413601 1 + C G KIRC 61413584 + 61413564 61413604 41 TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATG TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATGATG < 41bp 1 0.434671873722452 1 0.838131904602051 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413584 chr2:61413601 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_42201 0 0 1 2 61413585 61413606 mRNA hsa-miR-433 AHSA2 miRanda miRanda
14034 chr8 110567065 110567065 1 + G A KIRC 110567073 + 110567053 110567093 41 TTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACAC TTTGGAACAACTAGAACCTGACTATTTTAAGGACATGACAC < 41bp 1 0.502866548527041 1 0.523548066616058 experiment 0.994266902945917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110567073 chr8:110567065 synonymous SNV . 0 hm6A_associated_SNPs_42223 0 0 1 2 110567045 110567068 mRNA hsa-miR-145 EBAG9 miRanda miRanda
14034 chr8 110567065 110567065 1 + G A KIRC 110567073 + 110567053 110567093 41 TTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACAC TTTGGAACAACTAGAACCTGACTATTTTAAGGACATGACAC < 41bp 1 0.502866548527041 1 0.523548066616058 experiment 0.994266902945917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 13 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110567073 chr8:110567065 synonymous SNV . 0 hm6A_associated_SNPs_42223 0 0 1 2 110567046 110567066 mRNA hsa-miR-382 EBAG9 miRanda miRanda
14034 chr12 108082496 108082496 1 + G A KIRC 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGATGACCCAGAGGATGACAGGACGCTTGATGATGATG < 41bp 1 0.75344622737302 1 0.972239971160889 experiment 0.493107545253959 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 6 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082496 nonsynonymous SNV 0.875 0 hm6A_associated_SNPs_42240 0 0 1 3 108082496 108082516 mRNA hsa-miR-205 PWP1 miRanda miRanda
14034 chr12 108082496 108082496 1 + G A KIRC 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGATGACCCAGAGGATGACAGGACGCTTGATGATGATG < 41bp 1 0.75344622737302 1 0.972239971160889 experiment 0.493107545253959 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 6 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082496 nonsynonymous SNV 0.875 0 hm6A_associated_SNPs_42240 0 0 1 3 108082486 108082507 mRNA hsa-miR-330-5p PWP1 miRanda miRanda
14034 chr12 108082496 108082496 1 + G A KIRC 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGATGACCCAGAGGATGACAGGACGCTTGATGATGATG < 41bp 1 0.75344622737302 1 0.972239971160889 experiment 0.493107545253959 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 6 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082496 nonsynonymous SNV 0.875 0 hm6A_associated_SNPs_42240 0 0 1 3 108082486 108082507 mRNA hsa-miR-326 PWP1 miRanda miRanda
14034 chr12 110029066 110029066 1 + C G KIRC 110029073 + 110029053 110029093 41 AGATCGTGGCCCCCCTCCTGACCTCAATAGATGCCATCTCC AGATCGTGGCCCCGCTCCTGACCTCAATAGATGCCATCTCC < 41bp 1 0.159078075948676 1 0.0703684389591217 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 MVK ENSG00000110921 CDS Human protein_coding chr12:110029073 chr12:110029066 synonymous SNV . 0 hm6A_associated_SNPs_42255 1 0 1 1 110029056 110029078 mRNA hsa-let-7e MVK miRanda miRanda
14034 chr18 2703754 2703754 1 + A C KIRP 2703758 + 2703738 2703778 41 TGTCATGAGAAGTATGATAAACAAATAAAATTTACACTTTT TGTCATGAGAAGTATGCTAAACAAATAAAATTTACACTTTT < 41bp 1 0.654484768832708 1 0.181998819112778 experiment 0.691030462334583 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 17 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2703758 chr18:2703754 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_42378 0 0 1 1 2703748 2703770 mRNA hsa-miR-590-3p SMCHD1 miRanda miRanda
14034 chr2 44457731 44457731 1 + T C KIRP 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA CTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA < 41bp 1 0.186797735680111 1 0.948094248771667 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457731 synonymous SNV . 0 hm6A_associated_SNPs_42380 0 0 0 1 44457728 44457749 mRNA hsa-miR-338-3p PPM1B miRanda miRanda
14034 chr17 10608594 10608594 1 + T G KIRP 10608587 + 10608567 10608607 41 GGGAAACCATGAATTCTATAACTTCAGTAGAGAGTATTTAA GGGAAACCATGAATTCTATAACTTCAGGAGAGAGTATTTAA < 41bp 1 0.635130449064755 1 0.972956895828247 experiment 0.729739101870491 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608587 chr17:10608594 nonsynonymous SNV 0.980 2 hm6A_associated_SNPs_42461 0 0 0 4 10608584 10608605 mRNA hsa-miR-200b C17orf48 miRanda miRanda
14034 chr17 10608594 10608594 1 + T G KIRP 10608587 + 10608567 10608607 41 GGGAAACCATGAATTCTATAACTTCAGTAGAGAGTATTTAA GGGAAACCATGAATTCTATAACTTCAGGAGAGAGTATTTAA < 41bp 1 0.635130449064755 1 0.972956895828247 experiment 0.729739101870491 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608587 chr17:10608594 nonsynonymous SNV 0.980 2 hm6A_associated_SNPs_42461 0 0 0 4 10608594 10608616 mRNA hsa-miR-122 C17orf48 miRanda miRanda
14034 chr17 10608594 10608594 1 + T G KIRP 10608587 + 10608567 10608607 41 GGGAAACCATGAATTCTATAACTTCAGTAGAGAGTATTTAA GGGAAACCATGAATTCTATAACTTCAGGAGAGAGTATTTAA < 41bp 1 0.635130449064755 1 0.972956895828247 experiment 0.729739101870491 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608587 chr17:10608594 nonsynonymous SNV 0.980 2 hm6A_associated_SNPs_42461 0 0 0 4 10608583 10608605 mRNA hsa-miR-200c C17orf48 miRanda miRanda
14034 chr17 10608594 10608594 1 + T G KIRP 10608587 + 10608567 10608607 41 GGGAAACCATGAATTCTATAACTTCAGTAGAGAGTATTTAA GGGAAACCATGAATTCTATAACTTCAGGAGAGAGTATTTAA < 41bp 1 0.635130449064755 1 0.972956895828247 experiment 0.729739101870491 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608587 chr17:10608594 nonsynonymous SNV 0.980 2 hm6A_associated_SNPs_42461 0 0 0 4 10608584 10608605 mRNA hsa-miR-429 C17orf48 miRanda miRanda
14034 chr10 27459483 27459483 1 + T C KIRP 27459480 + 27459460 27459500 41 TATACCAATGATAGCAAAAAACCTTATGTGTGAACTCGATG TATACCAATGATAGCAAAAAACCCTATGTGTGAACTCGATG < 41bp 1 0.660856496431325 1 0.966528832912445 experiment 0.67828700713735 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459480 chr10:27459483 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_42515 0 0 1 1 27459473 27459493 mRNA hsa-miR-377 MASTL miRanda miRanda
14034 chr20 37153507 37153507 1 + C A KIRP 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCATTTGTTCTGCT < 41bp 1 0.226222387200444 1 0.0132543742656708 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153507 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_42520 0 0 1 7 37153506 37153528 mRNA hsa-miR-26a RALGAPB miRanda miRanda
14034 chr20 37153507 37153507 1 + C A KIRP 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCATTTGTTCTGCT < 41bp 1 0.226222387200444 1 0.0132543742656708 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153507 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_42520 0 0 1 7 37153507 37153528 mRNA hsa-miR-26b RALGAPB miRanda miRanda
14034 chr20 37153507 37153507 1 + C A KIRP 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCATTTGTTCTGCT < 41bp 1 0.226222387200444 1 0.0132543742656708 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153507 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_42520 0 0 1 7 37153501 37153523 mRNA hsa-miR-27a RALGAPB miRanda miRanda
14034 chr20 37153507 37153507 1 + C A KIRP 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCATTTGTTCTGCT < 41bp 1 0.226222387200444 1 0.0132543742656708 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153507 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_42520 0 0 1 7 37153499 37153520 mRNA hsa-miR-214 RALGAPB miRanda miRanda
14034 chr20 37153507 37153507 1 + C A KIRP 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCATTTGTTCTGCT < 41bp 1 0.226222387200444 1 0.0132543742656708 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153507 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_42520 0 0 1 7 37153507 37153526 mRNA hsa-miR-224 RALGAPB miRanda miRanda
14034 chr20 37153507 37153507 1 + C A KIRP 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCATTTGTTCTGCT < 41bp 1 0.226222387200444 1 0.0132543742656708 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153507 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_42520 0 0 1 7 37153501 37153523 mRNA hsa-miR-27b RALGAPB miRanda miRanda
14034 chr20 37153507 37153507 1 + C A KIRP 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCATTTGTTCTGCT < 41bp 1 0.226222387200444 1 0.0132543742656708 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 30 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153507 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_42520 0 0 1 7 37153493 37153514 mRNA hsa-miR-495 RALGAPB miRanda miRanda
14034 chr3 179334831 179334831 1 + A C KIRP 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATACGGT < 41bp 1 0.742586499074064 1 0.389504730701447 experiment 0.514827001851871 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334831 nonsynonymous SNV 0.308 4 hm6A_associated_SNPs_42536 0 0 1 4 179334821 179334832 mRNA hsa-miR-190 NDUFB5 miRanda miRanda
14034 chr3 179334831 179334831 1 + A C KIRP 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATACGGT < 41bp 1 0.742586499074064 1 0.389504730701447 experiment 0.514827001851871 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334831 nonsynonymous SNV 0.308 4 hm6A_associated_SNPs_42536 0 0 1 4 179334810 179334831 mRNA hsa-miR-374a NDUFB5 miRanda miRanda
14034 chr3 179334831 179334831 1 + A C KIRP 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATACGGT < 41bp 1 0.742586499074064 1 0.389504730701447 experiment 0.514827001851871 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334831 nonsynonymous SNV 0.308 4 hm6A_associated_SNPs_42536 0 0 1 4 179334824 179334832 mRNA hsa-miR-190b NDUFB5 miRanda miRanda
14034 chr3 179334831 179334831 1 + A C KIRP 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATACGGT < 41bp 1 0.742586499074064 1 0.389504730701447 experiment 0.514827001851871 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334831 nonsynonymous SNV 0.308 4 hm6A_associated_SNPs_42536 0 0 1 4 179334810 179334831 mRNA hsa-miR-374b NDUFB5 miRanda miRanda
14034 chr1 53236935 53236935 1 + C A KIRP 53236934 + 53236914 53236954 41 GCCTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCT GCCTGGTGCTGAATTCATTAAATCTCTCCCTCGAGGATCCT Direct Loss 1 0.687030679404867 1 0.888920307159424 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236934 chr1:53236935 nonsynonymous SNV 0.899 1 hm6A_associated_SNPs_42552 0 0 1 1 53236920 53236943 mRNA hsa-miR-185 ZYG11B miRanda miRanda
14034 chr17 61628109 61628109 1 + G T KIRP 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTACGCGATGAACTTGAGTGTGCGGCCCGATA < 41bp 1 0.632067091146663 1 0.998117208480835 experiment 0.735865817706674 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628109 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_42580 0 0 1 2 61628088 61628112 mRNA hsa-miR-145 DCAF7 miRanda miRanda
14034 chr17 61628109 61628109 1 + G T KIRP 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTACGCGATGAACTTGAGTGTGCGGCCCGATA < 41bp 1 0.632067091146663 1 0.998117208480835 experiment 0.735865817706674 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628109 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_42580 0 0 1 2 61628090 61628113 mRNA hsa-miR-136 DCAF7 miRanda miRanda
14034 chr14 70238167 70238167 1 + A G KIRP 70238165 + 70238145 70238185 41 ATCAAGGTCCAGATCAGTTGACAGTGGCAATTAAACTGTAA ATCAAGGTCCAGATCAGTTGACGGTGGCAATTAAACTGTAA Direct Loss 1 0.780699063240411 1 0.991497218608856 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70238165 chr14:70238167 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_42606 0 0 1 3 70238153 70238176 mRNA hsa-miR-25 SFRS5 miRanda miRanda
14034 chr14 70238167 70238167 1 + A G KIRP 70238165 + 70238145 70238185 41 ATCAAGGTCCAGATCAGTTGACAGTGGCAATTAAACTGTAA ATCAAGGTCCAGATCAGTTGACGGTGGCAATTAAACTGTAA Direct Loss 1 0.780699063240411 1 0.991497218608856 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70238165 chr14:70238167 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_42606 0 0 1 3 70238152 70238176 mRNA hsa-miR-363 SFRS5 miRanda miRanda
14034 chr14 70238167 70238167 1 + A G KIRP 70238165 + 70238145 70238185 41 ATCAAGGTCCAGATCAGTTGACAGTGGCAATTAAACTGTAA ATCAAGGTCCAGATCAGTTGACGGTGGCAATTAAACTGTAA Direct Loss 1 0.780699063240411 1 0.991497218608856 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70238165 chr14:70238167 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_42606 0 0 1 3 70238155 70238176 mRNA hsa-miR-367 SFRS5 miRanda miRanda
14034 chr11 134241359 134241359 1 + A G KIRP 134241349 + 134241329 134241369 41 AGTATCCATAGGATTCTTGGACTACAAGACAACGAAGATTG AGTATCCATAGGATTCTTGGACTACAAGACGACGAAGATTG < 41bp 1 0.238745777540258 1 0.932938098907471 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134241349 chr11:134241359 synonymous SNV . 0 hm6A_associated_SNPs_42692 0 0 0 1 134241341 134241363 mRNA hsa-miR-187 GLB1L2 miRanda miRanda
14034 chr7 45112359 45112359 1 + C T KIRP 45112346 + 45112326 45112366 41 TGACTCTTCTACAAAAGTGGACATTAAGGAGACCTACGAGG TGACTCTTCTACAAAAGTGGACATTAAGGAGACTTACGAGG < 41bp 1 0.557142832593598 1 0.861023366451263 experiment 0.885714334812804 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112346 chr7:45112359 synonymous SNV . 0 hm6A_associated_SNPs_42701 0 0 1 7 45112354 45112377 mRNA hsa-miR-149 CCM2 miRanda miRanda
14034 chr7 45112359 45112359 1 + C T KIRP 45112346 + 45112326 45112366 41 TGACTCTTCTACAAAAGTGGACATTAAGGAGACCTACGAGG TGACTCTTCTACAAAAGTGGACATTAAGGAGACTTACGAGG < 41bp 1 0.557142832593598 1 0.861023366451263 experiment 0.885714334812804 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112346 chr7:45112359 synonymous SNV . 0 hm6A_associated_SNPs_42701 0 0 1 7 45112356 45112382 mRNA hsa-miR-302a CCM2 miRanda miRanda
14034 chr7 45112359 45112359 1 + C T KIRP 45112346 + 45112326 45112366 41 TGACTCTTCTACAAAAGTGGACATTAAGGAGACCTACGAGG TGACTCTTCTACAAAAGTGGACATTAAGGAGACTTACGAGG < 41bp 1 0.557142832593598 1 0.861023366451263 experiment 0.885714334812804 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112346 chr7:45112359 synonymous SNV . 0 hm6A_associated_SNPs_42701 0 0 1 7 45112356 45112382 mRNA hsa-miR-302b CCM2 miRanda miRanda
14034 chr7 45112359 45112359 1 + C T KIRP 45112346 + 45112326 45112366 41 TGACTCTTCTACAAAAGTGGACATTAAGGAGACCTACGAGG TGACTCTTCTACAAAAGTGGACATTAAGGAGACTTACGAGG < 41bp 1 0.557142832593598 1 0.861023366451263 experiment 0.885714334812804 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112346 chr7:45112359 synonymous SNV . 0 hm6A_associated_SNPs_42701 0 0 1 7 45112356 45112382 mRNA hsa-miR-302c CCM2 miRanda miRanda
14034 chr7 45112359 45112359 1 + C T KIRP 45112346 + 45112326 45112366 41 TGACTCTTCTACAAAAGTGGACATTAAGGAGACCTACGAGG TGACTCTTCTACAAAAGTGGACATTAAGGAGACTTACGAGG < 41bp 1 0.557142832593598 1 0.861023366451263 experiment 0.885714334812804 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112346 chr7:45112359 synonymous SNV . 0 hm6A_associated_SNPs_42701 0 0 1 7 45112356 45112382 mRNA hsa-miR-302d CCM2 miRanda miRanda
14034 chr7 45112359 45112359 1 + C T KIRP 45112346 + 45112326 45112366 41 TGACTCTTCTACAAAAGTGGACATTAAGGAGACCTACGAGG TGACTCTTCTACAAAAGTGGACATTAAGGAGACTTACGAGG < 41bp 1 0.557142832593598 1 0.861023366451263 experiment 0.885714334812804 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112346 chr7:45112359 synonymous SNV . 0 hm6A_associated_SNPs_42701 0 0 1 7 45112355 45112382 mRNA hsa-miR-373 CCM2 miRanda miRanda
14034 chr7 45112359 45112359 1 + C T KIRP 45112346 + 45112326 45112366 41 TGACTCTTCTACAAAAGTGGACATTAAGGAGACCTACGAGG TGACTCTTCTACAAAAGTGGACATTAAGGAGACTTACGAGG < 41bp 1 0.557142832593598 1 0.861023366451263 experiment 0.885714334812804 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112346 chr7:45112359 synonymous SNV . 0 hm6A_associated_SNPs_42701 0 0 1 7 45112357 45112382 mRNA hsa-miR-520d-3p CCM2 miRanda miRanda
14034 chr17 62532827 62532827 1 + G C KIRP 62532809 + 62532789 62532829 41 GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGA GCCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCACGA < 41bp 1 0.65388083648805 1 0.986091732978821 experiment 0.692238327023899 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62532809 chr17:62532827 nonsynonymous SNV 0.994 4 hm6A_associated_SNPs_42717 0 0 1 1 62532817 62532839 mRNA hsa-miR-145 CCDC45 miRanda miRanda
14034 chr1 82456565 82456565 1 + T C LGG 82456555 + 82456535 82456575 41 CCTACAGTCCCCCAACAGAGACTCTCTTTATACAAGCATGC CCTACAGTCCCCCAACAGAGACTCTCTTTACACAAGCATGC < 41bp 1 0.690565269321886 1 0.999677240848541 experiment 0.618869461356229 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456555 chr1:82456565 synonymous SNV . 0 hm6A_associated_SNPs_42723 0 0 1 1 82456549 82456567 mRNA hsa-miR-340 LPHN2 miRanda miRanda
14034 chrX 73046827 73046827 1 - T C LGG 73046808 - 73046788 73046828 41 AAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGG AGGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGG < 41bp 1 0.380092925301552 1 0.0801384150981903 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046808 chrX:73046827 . . 0 hm6A_associated_SNPs_42735 0 0 1 2 73046824 73046846 lncRNA hsa-miR-3140-3p XIST miRanda starBase2
14034 chrX 73046827 73046827 1 - T C LGG 73046808 - 73046788 73046828 41 AAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGG AGGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGG < 41bp 1 0.380092925301552 1 0.0801384150981903 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046808 chrX:73046827 . . 0 hm6A_associated_SNPs_42735 0 0 1 2 73046817 73046839 lncRNA hsa-miR-526b-5p XIST miRanda starBase2
14034 chr6 32944712 32944712 1 + A G LGG 32944697 + 32944677 32944717 41 CATCATTAAGCACCCCATGGACCTCAGCACTGTCAAGGTAC CATCATTAAGCACCCCATGGACCTCAGCACTGTCAGGGTAC < 41bp 1 0.691849905725916 1 0.899393320083618 experiment 0.616300188548168 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32944697 chr6:32944712 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_42765 0 0 1 1 32944704 32944713 mRNA hsa-miR-590-3p BRD2 miRanda miRanda
14034 chr18 55912729 55912729 1 + A G LGG 55912723 + 55912703 55912743 41 GAGAACTTGCTTTGGTCCAGACAAAAACAATTAAAAAGGTA GAGAACTTGCTTTGGTCCAGACAAAAGCAATTAAAAAGGTA < 41bp 1 0.514676838570904 1 0.018409937620163 experiment 0.970646322858192 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 27 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55912723 chr18:55912729 nonsynonymous SNV 0.982 4 hm6A_associated_SNPs_42775 0 0 1 4 55912727 55912740 mRNA hsa-miR-199a-5p NEDD4L miRanda miRanda
14034 chr18 55912729 55912729 1 + A G LGG 55912723 + 55912703 55912743 41 GAGAACTTGCTTTGGTCCAGACAAAAACAATTAAAAAGGTA GAGAACTTGCTTTGGTCCAGACAAAAGCAATTAAAAAGGTA < 41bp 1 0.514676838570904 1 0.018409937620163 experiment 0.970646322858192 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 27 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55912723 chr18:55912729 nonsynonymous SNV 0.982 4 hm6A_associated_SNPs_42775 0 0 1 4 55912710 55912730 mRNA hsa-miR-129-5p NEDD4L miRanda miRanda
14034 chr18 55912729 55912729 1 + A G LGG 55912723 + 55912703 55912743 41 GAGAACTTGCTTTGGTCCAGACAAAAACAATTAAAAAGGTA GAGAACTTGCTTTGGTCCAGACAAAAGCAATTAAAAAGGTA < 41bp 1 0.514676838570904 1 0.018409937620163 experiment 0.970646322858192 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 27 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55912723 chr18:55912729 nonsynonymous SNV 0.982 4 hm6A_associated_SNPs_42775 0 0 1 4 55912723 55912740 mRNA hsa-miR-187 NEDD4L miRanda miRanda
14034 chr18 55912729 55912729 1 + A G LGG 55912723 + 55912703 55912743 41 GAGAACTTGCTTTGGTCCAGACAAAAACAATTAAAAAGGTA GAGAACTTGCTTTGGTCCAGACAAAAGCAATTAAAAAGGTA < 41bp 1 0.514676838570904 1 0.018409937620163 experiment 0.970646322858192 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 27 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55912723 chr18:55912729 nonsynonymous SNV 0.982 4 hm6A_associated_SNPs_42775 0 0 1 4 55912727 55912740 mRNA hsa-miR-199b-5p NEDD4L miRanda miRanda
14034 chr2 149227787 149227787 1 + G A LGG 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CATGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA < 41bp 1 0.675355612396626 1 0.855801343917847 experiment 0.649288775206748 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227787 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_42811 1 0 0 6 149227783 149227805 mRNA hsa-miR-33a MBD5 miRanda miRanda
14034 chr2 149227787 149227787 1 + G A LGG 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CATGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA < 41bp 1 0.675355612396626 1 0.855801343917847 experiment 0.649288775206748 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227787 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_42811 1 0 0 6 149227777 149227797 mRNA hsa-miR-34a MBD5 miRanda miRanda
14034 chr2 149227787 149227787 1 + G A LGG 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CATGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA < 41bp 1 0.675355612396626 1 0.855801343917847 experiment 0.649288775206748 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227787 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_42811 1 0 0 6 149227775 149227797 mRNA hsa-miR-34c-5p MBD5 miRanda miRanda
14034 chr2 149227787 149227787 1 + G A LGG 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CATGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA < 41bp 1 0.675355612396626 1 0.855801343917847 experiment 0.649288775206748 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227787 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_42811 1 0 0 6 149227776 149227797 mRNA hsa-miR-449a MBD5 miRanda miRanda
14034 chr2 149227787 149227787 1 + G A LGG 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CATGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA < 41bp 1 0.675355612396626 1 0.855801343917847 experiment 0.649288775206748 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227787 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_42811 1 0 0 6 149227784 149227805 mRNA hsa-miR-33b MBD5 miRanda miRanda
14034 chr2 149227787 149227787 1 + G A LGG 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CATGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA < 41bp 1 0.675355612396626 1 0.855801343917847 experiment 0.649288775206748 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227787 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_42811 1 0 0 6 149227776 149227797 mRNA hsa-miR-449b MBD5 miRanda miRanda
14034 chrX 73046569 73046569 1 - A T LGG 73046562 - 73046542 73046582 41 AGCGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAG AGCGAAAAAGGTAACTCAAGACTAACGGCCGGAATCTGGAG < 41bp 1 0.408226804829446 1 0.947523951530457 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046562 chrX:73046569 . . 0 hm6A_associated_SNPs_42849 0 0 1 1 73046561 73046582 lncRNA hsa-miR-526b-5p XIST miRanda starBase2
14034 chrX 73046569 73046569 1 - A T LGG 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTAACT < 41bp 1 0.325985875809053 1 0.906369805335999 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046569 . . 0 hm6A_associated_SNPs_42850 0 0 1 1 73046561 73046582 lncRNA hsa-miR-526b-5p XIST miRanda starBase2
14034 chr1 97278639 97278639 1 + T A LGG 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTCGCTAACACTGGGGGCACAGTGAAAG < 41bp 1 0.611908013149778 1 0.955665707588196 experiment 0.776183973700443 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278639 synonymous SNV . 0 hm6A_associated_SNPs_42878 0 0 1 3 97278623 97278644 mRNA hsa-miR-27a PTBP2 miRanda miRanda
14034 chr1 97278639 97278639 1 + T A LGG 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTCGCTAACACTGGGGGCACAGTGAAAG < 41bp 1 0.611908013149778 1 0.955665707588196 experiment 0.776183973700443 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278639 synonymous SNV . 0 hm6A_associated_SNPs_42878 0 0 1 3 97278623 97278644 mRNA hsa-miR-27b PTBP2 miRanda miRanda
14034 chr1 97278639 97278639 1 + T A LGG 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTCGCTAACACTGGGGGCACAGTGAAAG < 41bp 1 0.611908013149778 1 0.955665707588196 experiment 0.776183973700443 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278639 synonymous SNV . 0 hm6A_associated_SNPs_42878 0 0 1 3 97278622 97278643 mRNA hsa-miR-128 PTBP2 miRanda miRanda
14034 chr1 25140630 25140630 1 + A G LGG 25140619 + 25140599 25140639 41 TGCAGAACTTGGCTCCCGGGACCCACCCACCATTTATAACT TGCAGAACTTGGCTCCCGGGACCCACCCACCGTTTATAACT < 41bp 1 0.147982981371183 1 0.481763869524002 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 CLIC4 ENSG00000169504 CDS Human protein_coding chr1:25140619 chr1:25140630 synonymous SNV . 0 hm6A_associated_SNPs_42890 0 0 1 1 25140627 25140647 mRNA hsa-miR-653 CLIC4 miRanda miRanda
14034 chr1 25140630 25140630 1 + A G LGG 25140637 + 25140617 25140657 41 GGACCCACCCACCATTTATAACTTTCAACAGTGAAGTCAAA GGACCCACCCACCGTTTATAACTTTCAACAGTGAAGTCAAA < 41bp 1 0.424528414723007 1 0.631363749504089 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 CLIC4 ENSG00000169504 CDS Human protein_coding chr1:25140637 chr1:25140630 synonymous SNV . 0 hm6A_associated_SNPs_42891 0 0 1 1 25140627 25140647 mRNA hsa-miR-653 CLIC4 miRanda miRanda
14034 chr4 527753 527753 1 + G A LGG 527763 + 527743 527783 41 TGCACTTCCTGAGCTCAGAAACACGCAGGTGAGGCGCCTCT TGCACTTCCTAAGCTCAGAAACACGCAGGTGAGGCGCCTCT < 41bp 1 0.369534624746011 1 0.107835799455643 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 PIGG ENSG00000174227 CDS Human protein_coding chr4:527763 chr4:527753 synonymous SNV . 0 hm6A_associated_SNPs_42894 0 0 1 1 527738 527761 mRNA hsa-miR-149 PIGG miRanda miRanda
14034 chr7 112112336 112112336 1 + G A LGG 112112356 + 112112336 112112376 41 GGTAAAAAAACACACCTATGACACCTTTAAGGAGGTTCTTG AGTAAAAAAACACACCTATGACACCTTTAAGGAGGTTCTTG < 41bp 1 0.706467320587539 1 0.236095666885376 experiment 0.587065358824921 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112112356 chr7:112112336 stopgain 1.000 1 hm6A_associated_SNPs_42973 0 0 1 1 112112315 112112337 mRNA hsa-miR-338-3p IFRD1 miRanda miRanda
14034 chr9 32420966 32420966 1 + G A LGG 32420948 + 32420928 32420968 41 TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGGAG TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGAAG < 41bp 1 0.660133693085219 1 0.0825910866260529 experiment 0.679732613829563 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32420948 chr9:32420966 nonsynonymous SNV 0.935 4 hm6A_associated_SNPs_42981 0 0 0 2 32420956 32420979 mRNA hsa-miR-103 ACO1 miRanda miRanda
14034 chr9 32420966 32420966 1 + G A LGG 32420948 + 32420928 32420968 41 TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGGAG TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGAAG < 41bp 1 0.660133693085219 1 0.0825910866260529 experiment 0.679732613829563 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32420948 chr9:32420966 nonsynonymous SNV 0.935 4 hm6A_associated_SNPs_42981 0 0 0 2 32420956 32420979 mRNA hsa-miR-107 ACO1 miRanda miRanda
14034 chr12 93881384 93881384 1 + C A LGG 93881383 + 93881363 93881403 41 GAGGAAGGACCTATGATAGAACAACTTAGCAAAATGTTCTT GAGGAAGGACCTATGATAGAAAAACTTAGCAAAATGTTCTT Direct Loss 1 0.792489286166947 1 0.610714435577393 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93881383 chr12:93881384 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_42996 0 0 1 1 93881368 93881390 mRNA hsa-miR-382 MRPL42 miRanda miRanda
14034 chr15 63336271 63336271 1 + G A LGG 63336258 + 63336238 63336278 41 CTGGTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA CTGGTGTCACTGCAAAAGAAACTCAAGGGCACCAAAGATGA < 41bp 1 0.424491913924649 1 0.998684644699097 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 TPM1 ENSG00000140416 CDS Human protein_coding chr15:63336258 chr15:63336271 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_43073 2 0 1 1 63336262 63336285 mRNA hsa-miR-145 TPM1 miRanda miRanda
14034 chr15 63336271 63336271 1 + G A LGG 63336279 + 63336259 63336299 41 CTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGGC CTCAAGGGCACCAAAGATGAACTGGACAAATACTCTGAGGC < 41bp 1 0.462398526148008 1 0.998236656188965 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 TPM1 ENSG00000140416 CDS Human protein_coding chr15:63336279 chr15:63336271 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_43074 2 0 1 1 63336262 63336285 mRNA hsa-miR-145 TPM1 miRanda miRanda
14034 chr2 28521236 28521236 1 + G A LGG 28521232 + 28521212 28521252 41 GCCTCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATTTC GCCTCTGTTTTTCCCTCGAGACCAACCAACTCTCACATTTC < 41bp 1 0.0713090682365125 1 0.28109273314476 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521232 chr2:28521236 synonymous SNV . 0 hm6A_associated_SNPs_43098 0 0 1 2 28521233 28521254 mRNA hsa-miR-203 BRE miRanda miRanda
14034 chr2 28521236 28521236 1 + G A LGG 28521232 + 28521212 28521252 41 GCCTCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATTTC GCCTCTGTTTTTCCCTCGAGACCAACCAACTCTCACATTTC < 41bp 1 0.0713090682365125 1 0.28109273314476 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521232 chr2:28521236 synonymous SNV . 0 hm6A_associated_SNPs_43098 0 0 1 2 28521212 28521238 mRNA hsa-miR-138 BRE miRanda miRanda
14034 chr1 93300378 93300378 1 + G C LGG 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCACCGTATGCACACGAACTGCCAAAATATGGTGTGAA < 41bp 1 0.230638874424812 1 0.689854979515076 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300378 nonsynonymous SNV 0.997 5 hm6A_associated_SNPs_43125 0 0 1 2 93300378 93300400 mRNA hsa-miR-96 RPL5 miRanda miRanda
14034 chr1 93300378 93300378 1 + G C LGG 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCACCGTATGCACACGAACTGCCAAAATATGGTGTGAA < 41bp 1 0.230638874424812 1 0.689854979515076 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300378 nonsynonymous SNV 0.997 5 hm6A_associated_SNPs_43125 0 0 1 2 93300377 93300400 mRNA hsa-miR-182 RPL5 miRanda miRanda
14034 chr14 76621051 76621051 1 + C T LGG 76621050 + 76621030 76621070 41 ACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATGCAC ACATTCTTGGCATGAATCTGATTCCTTTACTGAAAATGCAC Direct Loss 1 0.79042488083459 1 0.976884484291077 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76621050 chr14:76621051 synonymous SNV . 0 hm6A_associated_SNPs_43129 0 0 1 2 76621050 76621074 mRNA hsa-miR-18a C14orf118 miRanda miRanda
14034 chr14 76621051 76621051 1 + C T LGG 76621050 + 76621030 76621070 41 ACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATGCAC ACATTCTTGGCATGAATCTGATTCCTTTACTGAAAATGCAC Direct Loss 1 0.79042488083459 1 0.976884484291077 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 22 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76621050 chr14:76621051 synonymous SNV . 0 hm6A_associated_SNPs_43129 0 0 1 2 76621050 76621074 mRNA hsa-miR-18b C14orf118 miRanda miRanda
14034 chr8 124117596 124117596 1 + G T LGG 124117606 + 124117586 124117626 41 GTGATCTTAAGATGAAAGTAACATCAGGGAGAGTACAGCAG GTGATCTTAATATGAAAGTAACATCAGGGAGAGTACAGCAG < 41bp 1 0.406108781383047 1 0.0336371958255768 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124117606 chr8:124117596 nonsynonymous SNV 0.098 3 hm6A_associated_SNPs_43147 0 0 1 1 124117591 124117615 mRNA hsa-miR-125a-5p WDR67 miRanda miRanda
14034 chr1 24975421 24975421 1 + G A LGG 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATAGGAGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.594571091445756 1 0.84007054567337 experiment 0.810857817108488 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975421 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_43171 0 0 1 3 24975419 24975443 mRNA hsa-miR-214 SRRM1 miRanda miRanda
14034 chr1 24975421 24975421 1 + G A LGG 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATAGGAGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.594571091445756 1 0.84007054567337 experiment 0.810857817108488 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975421 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_43171 0 0 1 3 24975405 24975426 mRNA hsa-miR-150 SRRM1 miRanda miRanda
14034 chr1 24975421 24975421 1 + G A LGG 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATAGGAGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.594571091445756 1 0.84007054567337 experiment 0.810857817108488 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975421 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_43171 0 0 1 3 24975421 24975445 mRNA hsa-miR-424 SRRM1 miRanda miRanda
14034 chr11 5632107 5632107 1 + C G LGG 5632127 + 5632107 5632147 41 CTGTCTGGAAAAGCATTATGACTGTAGTGTCCTGGGCTCCC GTGTCTGGAAAAGCATTATGACTGTAGTGTCCTGGGCTCCC < 41bp 1 0.556727291514572 1 0.370589196681976 experiment 0.886545416970856 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632127 chr11:5632107 synonymous SNV . 0 hm6A_associated_SNPs_43172 0 0 0 1 5632103 5632125 mRNA hsa-miR-155 TRIM6 miRanda miRanda
14034 chr5 180651273 180651273 1 + G A LGG 180651268 + 180651248 180651288 41 CACCCCCATGCGGGATGAAGACTACGAGGGTGACATGGAGG CACCCCCATGCGGGATGAAGACTACAAGGGTGACATGGAGG < 41bp 1 0.709398461098156 1 0.993371486663818 experiment 0.581203077803687 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651268 chr5:180651273 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_43179 0 0 1 1 180651251 180651274 mRNA hsa-miR-187 TRIM41 miRanda miRanda
14034 chr5 180651273 180651273 1 + G A LGG 180651280 + 180651260 180651300 41 GGATGAAGACTACGAGGGTGACATGGAGGAGGAGGTCGAGG GGATGAAGACTACAAGGGTGACATGGAGGAGGAGGTCGAGG < 41bp 1 0.70540845370018 1 0.994024991989136 experiment 0.58918309259964 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 14 TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651280 chr5:180651273 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_43180 0 0 1 1 180651251 180651274 mRNA hsa-miR-187 TRIM41 miRanda miRanda
14034 chr14 22476212 22476212 1 + C T LGG 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCTGTG < 41bp 1 0.063043672556794 1 0.948029279708862 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476212 nonsynonymous SNV . 0 hm6A_associated_SNPs_43197 0 0 0 2 22476205 22476225 mRNA hsa-miR-196a TRAV20 miRanda miRanda
14034 chr14 22476212 22476212 1 + C T LGG 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCTGTG < 41bp 1 0.063043672556794 1 0.948029279708862 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476212 nonsynonymous SNV . 0 hm6A_associated_SNPs_43197 0 0 0 2 22476205 22476225 mRNA hsa-miR-196b TRAV20 miRanda miRanda
14034 chr1 172558108 172558108 1 + A G LGG 172558098 + 172558078 172558118 41 ACACAAATATTTTGCAGTGAACTGACCACAATTTGTTGTAT ACACAAATATTTTGCAGTGAACTGACCACAGTTTGTTGTAT < 41bp 1 0.726163469239036 1 0.92443311214447 experiment 0.547673061521928 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 SUCO ENSG00000094975 CDS Human protein_coding chr1:172558098 chr1:172558108 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_43200 0 0 1 1 172558087 172558109 mRNA hsa-miR-599 C1orf9 miRanda miRanda
14034 chr19 10795094 10795094 1 + G C LGG 10795107 + 10795087 10795127 41 TGTAGGTGACTTTTTCACAGACTGCTACGGCTATCATGATT TGTAGGTCACTTTTTCACAGACTGCTACGGCTATCATGATT < 41bp 1 0.30279776697213 1 0.676050186157227 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 8 ILF3 ENSG00000129351 CDS Human protein_coding chr19:10795107 chr19:10795094 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_43239 0 0 1 1 10795079 10795099 mRNA hsa-miR-224 ILF3 miRanda miRanda
14034 chr20 57568587 57568587 1 + C T LGG 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAT < 41bp 1 0.332747777254363 1 0.958995819091797 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568587 synonymous SNV . 0 hm6A_associated_SNPs_43265 0 0 1 5 57568578 57568599 mRNA hsa-miR-302a TH1L miRanda miRanda
14034 chr20 57568587 57568587 1 + C T LGG 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAT < 41bp 1 0.332747777254363 1 0.958995819091797 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568587 synonymous SNV . 0 hm6A_associated_SNPs_43265 0 0 1 5 57568579 57568599 mRNA hsa-miR-302b TH1L miRanda miRanda
14034 chr20 57568587 57568587 1 + C T LGG 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAT < 41bp 1 0.332747777254363 1 0.958995819091797 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568587 synonymous SNV . 0 hm6A_associated_SNPs_43265 0 0 1 5 57568579 57568599 mRNA hsa-miR-302c TH1L miRanda miRanda
14034 chr20 57568587 57568587 1 + C T LGG 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAT < 41bp 1 0.332747777254363 1 0.958995819091797 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568587 synonymous SNV . 0 hm6A_associated_SNPs_43265 0 0 1 5 57568579 57568599 mRNA hsa-miR-302d TH1L miRanda miRanda
14034 chr20 57568587 57568587 1 + C T LGG 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAT < 41bp 1 0.332747777254363 1 0.958995819091797 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 41 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568587 synonymous SNV . 0 hm6A_associated_SNPs_43265 0 0 1 5 57568579 57568599 mRNA hsa-miR-372 TH1L miRanda miRanda
14034 chr17 18110257 18110257 1 + G A LGG 18110240 + 18110220 18110260 41 AACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAA AACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACCACAA < 41bp 1 0.311283607637011 1 0.0559908747673035 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 38 ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18110240 chr17:18110257 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_43298 0 0 1 1 18110246 18110268 mRNA hsa-miR-346 ALKBH5 miRanda miRanda
14034 chr17 59469378 59469378 1 + C T LGG 59469374 + 59469354 59469394 41 AAGCATCGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCG AAGCATCGAGACTCTGAGTAACAGTTCAGGCTCCACCAGCG < 41bp 1 0.744573400925181 1 0.984617471694946 experiment 0.510853198149639 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 25 BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59469374 chr17:59469378 synonymous SNV . 0 hm6A_associated_SNPs_43318 0 0 0 1 59469375 59469394 mRNA hsa-miR-138 BCAS3 miRanda miRanda
14034 chr11 17317743 17317743 1 + C T LGG 17317742 + 17317722 17317762 41 AGAAAAGCTCCAGAAAGCAGACATAGAGGAAATAAAGGTAA AGAAAAGCTCCAGAAAGCAGATATAGAGGAAATAAAGGTAA Direct Loss 1 0.461215386789366 1 0.00596973299980164 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17317742 chr11:17317743 synonymous SNV . 0 hm6A_associated_SNPs_43320 0 0 1 1 17317722 17317744 mRNA hsa-miR-346 NUCB2 miRanda miRanda
14034 chr22 19118978 19118978 1 - C A LGG 19118975 - 19118955 19118995 41 GATTTGACTTTTGCGTAGGAACCCTTGCCAAGATTGATGCC GATTTGACTTTTGCGTATGAACCCTTGCCAAGATTGATGCC < 41bp 1 0.399518432788905 1 0.995911836624146 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 18 TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19118975 chr22:19118978 synonymous SNV . 0 hm6A_associated_SNPs_43366 0 0 1 1 19118964 19118988 mRNA hsa-miR-182 DGCR14 miRanda miRanda
14034 chr22 19118978 19118978 1 - C A LGG 19118989 - 19118969 19119009 41 GCTCAGAGTAGGCAGATTTGACTTTTGCGTAGGAACCCTTG GCTCAGAGTAGGCAGATTTGACTTTTGCGTATGAACCCTTG < 41bp 1 0.594798674782908 1 0.984860122203827 experiment 0.810402650434185 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 32 TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19118989 chr22:19118978 synonymous SNV . 0 hm6A_associated_SNPs_43367 0 0 1 1 19118964 19118988 mRNA hsa-miR-182 DGCR14 miRanda miRanda
14034 chr1 233802625 233802625 1 + G A LGG 233802611 + 233802591 233802631 41 CTTCTCAGTCCTGGAGGATGACTGGAACTTCCTGGAATCCT CTTCTCAGTCCTGGAGGATGACTGGAACTTCCTGAAATCCT < 41bp 1 0.638441603434347 1 0.563000619411469 experiment 0.723116793131307 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802611 chr1:233802625 nonsynonymous SNV 0.992 3 hm6A_associated_SNPs_43371 0 0 1 1 233802623 233802644 mRNA hsa-miR-495 KCNK1 miRanda miRanda
14034 chr1 233802625 233802625 1 + G A LGG 233802617 + 233802597 233802637 41 AGTCCTGGAGGATGACTGGAACTTCCTGGAATCCTTTTATT AGTCCTGGAGGATGACTGGAACTTCCTGAAATCCTTTTATT < 41bp 1 0.63562536076808 1 0.717778325080872 experiment 0.72874927846384 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 29 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802617 chr1:233802625 nonsynonymous SNV 0.992 3 hm6A_associated_SNPs_43372 0 0 1 1 233802623 233802644 mRNA hsa-miR-495 KCNK1 miRanda miRanda
14034 chr17 58734076 58734076 1 + A G LGG 58734081 + 58734061 58734101 41 CTGCATCTCTCCAGAAGTGGACAATCAGGGAAACTTTACCA CTGCATCTCTCCAGAGGTGGACAATCAGGGAAACTTTACCA < 41bp 1 0.784445355819252 1 0.967374324798584 experiment 0.431109288361496 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58734081 chr17:58734076 synonymous SNV . 0 hm6A_associated_SNPs_43414 0 0 1 1 58734067 58734087 mRNA hsa-miR-219-5p PPM1D miRanda miRanda
14034 chr5 140049100 140049100 1 + G A LGG 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG CGGCACAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.77559670136984 1 0.992682933807373 experiment 0.44880659726032 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049100 nonsynonymous SNV 0.973 1 hm6A_associated_SNPs_43415 0 0 1 4 140049089 140049107 mRNA hsa-miR-129-5p WDR55 miRanda miRanda
14034 chr5 140049100 140049100 1 + G A LGG 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG CGGCACAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.77559670136984 1 0.992682933807373 experiment 0.44880659726032 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049100 nonsynonymous SNV 0.973 1 hm6A_associated_SNPs_43415 0 0 1 4 140049093 140049114 mRNA hsa-miR-204 WDR55 miRanda miRanda
14034 chr5 140049100 140049100 1 + G A LGG 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG CGGCACAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.77559670136984 1 0.992682933807373 experiment 0.44880659726032 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049100 nonsynonymous SNV 0.973 1 hm6A_associated_SNPs_43415 0 0 1 4 140049093 140049114 mRNA hsa-miR-211 WDR55 miRanda miRanda
14034 chr5 140049100 140049100 1 + G A LGG 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG CGGCACAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.77559670136984 1 0.992682933807373 experiment 0.44880659726032 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 5 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049100 nonsynonymous SNV 0.973 1 hm6A_associated_SNPs_43415 0 0 1 4 140049089 140049105 mRNA hsa-miR-450a WDR55 miRanda miRanda
14034 chr17 61662612 61662612 1 + G A LGG 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTGTCACCAGGTTAAACAACCATCGAGCATGTGTCA < 41bp 1 0.782167241679866 1 0.00755482912063599 experiment 0.435665516640268 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 11 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662612 nonsynonymous SNV 0.994 3 hm6A_associated_SNPs_43448 0 0 1 1 61662599 61662620 mRNA hsa-miR-490-3p DCAF7 miRanda miRanda
14034 chr11 65267740 65267740 1 + G A LGG 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATATGAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.114987260491107 1 0.99500435590744 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267740 . . 0 hm6A_associated_SNPs_43472 0 0 1 4 65267722 65267744 lncRNA hsa-miR-130a-5p MALAT1 miRanda starBase2
14034 chr11 65267740 65267740 1 + G A LGG 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATATGAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.114987260491107 1 0.99500435590744 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267740 . . 0 hm6A_associated_SNPs_43472 0 0 1 4 65267724 65267744 lncRNA hsa-miR-23a-3p MALAT1 miRanda starBase2
14034 chr11 65267740 65267740 1 + G A LGG 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATATGAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.114987260491107 1 0.99500435590744 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267740 . . 0 hm6A_associated_SNPs_43472 0 0 1 4 65267724 65267744 lncRNA hsa-miR-23b-3p MALAT1 miRanda starBase2
14034 chr11 65267740 65267740 1 + G A LGG 65267747 + 65267727 65267767 41 TAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATT TAGTTTGAAAAATATGAAGGACTTTCGTAACGGAAGTAATT < 41bp 1 0.114987260491107 1 0.99500435590744 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267747 chr11:65267740 . . 0 hm6A_associated_SNPs_43472 0 0 1 4 65267719 65267744 lncRNA hsa-miR-23c MALAT1 miRanda starBase2
14034 chr21 34635762 34635762 1 + C A LGG 34635777 + 34635757 34635797 41 CACTTCTGAGTCAGATGTTGACCTTGGGGATGGTTATATAA CACTTATGAGTCAGATGTTGACCTTGGGGATGGTTATATAA < 41bp 1 0.796770132629297 1 0.996611058712006 experiment 0.406459734741407 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635777 chr21:34635762 nonsynonymous SNV 0.011 2 hm6A_associated_SNPs_43485 0 0 1 2 34635746 34635769 mRNA hsa-miR-383 IFNAR2 miRanda miRanda
14034 chr21 34635762 34635762 1 + C A LGG 34635777 + 34635757 34635797 41 CACTTCTGAGTCAGATGTTGACCTTGGGGATGGTTATATAA CACTTATGAGTCAGATGTTGACCTTGGGGATGGTTATATAA < 41bp 1 0.796770132629297 1 0.996611058712006 experiment 0.406459734741407 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 6 IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635777 chr21:34635762 nonsynonymous SNV 0.011 2 hm6A_associated_SNPs_43485 0 0 1 2 34635757 34635779 mRNA hsa-miR-505 IFNAR2 miRanda miRanda
14034 chr1 70883695 70883695 1 + G A LGG 70883683 + 70883663 70883703 41 CCATCTTTTAAAAGCAGGAGACCAAATTATTTGTATGGATG CCATCTTTTAAAAGCAGGAGACCAAATTATTTATATGGATG < 41bp 1 0.308979591532086 1 0.0597575008869171 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 CTH ENSG00000116761 CDS Human protein_coding chr1:70883683 chr1:70883695 nonsynonymous SNV 0.996 5 hm6A_associated_SNPs_43500 0 0 1 2 70883677 70883699 mRNA hsa-miR-381 CTH miRanda miRanda
14034 chr1 70883695 70883695 1 + G A LGG 70883683 + 70883663 70883703 41 CCATCTTTTAAAAGCAGGAGACCAAATTATTTGTATGGATG CCATCTTTTAAAAGCAGGAGACCAAATTATTTATATGGATG < 41bp 1 0.308979591532086 1 0.0597575008869171 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 CTH ENSG00000116761 CDS Human protein_coding chr1:70883683 chr1:70883695 nonsynonymous SNV 0.996 5 hm6A_associated_SNPs_43500 0 0 1 2 70883678 70883699 mRNA hsa-miR-300 CTH miRanda miRanda
14034 chr9 35660849 35660849 1 + G T LGG 35660851 + 35660831 35660871 41 AAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGG AAGGATATGGAGGCTTCATAACCAGGTGAAGGCTCGGGAGG < 41bp 1 0.526904499272306 1 0.98918491601944 experiment 0.946191001455389 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 19 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660851 chr9:35660849 stopgain 0.977 0 hm6A_associated_SNPs_43529 0 0 1 1 35660847 35660868 mRNA hsa-miR-615-3p CCDC107 miRanda miRanda
14034 chr1 230398703 230398703 1 + G A LGG 230398698 + 230398678 230398718 41 AGATTGGAGCTTAGGAAGAAACTCAGCTGCAAGCCTTTCAA AGATTGGAGCTTAGGAAGAAACTCAACTGCAAGCCTTTCAA < 41bp 1 0.227606730292564 1 0.0349815487861633 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230398698 chr1:230398703 nonsynonymous SNV 0.869 0 hm6A_associated_SNPs_43550 0 0 1 1 230398698 230398718 mRNA hsa-miR-488 GALNT2 miRanda miRanda
14034 chr6 30459017 30459017 1 + G A LGG 30459012 + 30458992 30459032 41 ACCCTGCGGAGATCACACTGACCTGGCAGCAGGATGGGGAG ACCCTGCGGAGATCACACTGACCTGACAGCAGGATGGGGAG < 41bp 1 0.250580236013955 1 0.633969664573669 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 HLA-E ENSG00000204592 CDS Human protein_coding chr6:30459012 chr6:30459017 stopgain 0.963 0 hm6A_associated_SNPs_43551 0 0 1 1 30459002 30459025 mRNA hsa-miR-370 HLA-E miRanda miRanda
14034 chr16 50250053 50250053 1 + C T LGG 50250058 + 50250038 50250078 41 CTGGAAGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGA CTGGAAGAAGCTCTTTGGAAACACAAAGTCGCAGATGAGGA < 41bp 1 0.493775763854408 1 0.847027480602264 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50250058 chr16:50250053 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_43553 0 0 1 2 50250049 50250072 mRNA hsa-miR-378 PAPD5 miRanda miRanda
14034 chr16 50250053 50250053 1 + C T LGG 50250058 + 50250038 50250078 41 CTGGAAGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGA CTGGAAGAAGCTCTTTGGAAACACAAAGTCGCAGATGAGGA < 41bp 1 0.493775763854408 1 0.847027480602264 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50250058 chr16:50250053 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_43553 0 0 1 2 50250048 50250072 mRNA hsa-miR-422a PAPD5 miRanda miRanda
14034 chr14 95080923 95080923 1 + T A LGG 95080915 + 95080895 95080935 41 AGACCGAGGGACACACGTGGACCTCGGATTAGCCTCCGCCA AGACCGAGGGACACACGTGGACCTCGGAATAGCCTCCGCCA < 41bp 1 0.217594927480147 1 0.994795441627502 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 29 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080915 chr14:95080923 nonsynonymous SNV 0.002 1 hm6A_associated_SNPs_43590 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr14 95080923 95080923 1 + T A LGG 95080942 + 95080922 95080962 41 ATTAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA AATAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA < 41bp 1 0.374820570810474 1 0.998078942298889 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 2 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080942 chr14:95080923 nonsynonymous SNV 0.002 1 hm6A_associated_SNPs_43591 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr5 134146948 134146948 1 + G A LGG 134146960 + 134146940 134146980 41 TCAAGCTCGCTATGCTGGTGACATAATTAAAGCTCTTGAAT TCAAGCTCACTATGCTGGTGACATAATTAAAGCTCTTGAAT < 41bp 1 0.715548093528283 1 0.0718289613723755 experiment 0.568903812943435 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 9 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134146960 chr5:134146948 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_43592 0 0 1 1 134146938 134146958 mRNA hsa-miR-338-3p DDX46 miRanda miRanda
14034 chr8 38884200 38884200 1 + G T LGG 38884201 + 38884181 38884221 41 TCCTGTTCTGAACAGTTTGGACAAATCACTGTGGAGACATT TCCTGTTCTGAACAGTTTGTACAAATCACTGTGGAGACATT Direct Loss 1 0.478950207057013 1 0.713455975055695 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 20 ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38884201 chr8:38884200 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_43615 0 0 1 2 38884196 38884208 mRNA hsa-miR-219-5p ADAM9 miRanda miRanda
14034 chr8 38884200 38884200 1 + G T LGG 38884201 + 38884181 38884221 41 TCCTGTTCTGAACAGTTTGGACAAATCACTGTGGAGACATT TCCTGTTCTGAACAGTTTGTACAAATCACTGTGGAGACATT Direct Loss 1 0.478950207057013 1 0.713455975055695 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 20 ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38884201 chr8:38884200 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_43615 0 0 1 2 38884196 38884214 mRNA hsa-miR-128 ADAM9 miRanda miRanda
14034 chr5 74892160 74892160 1 + G T LGG 74892166 + 74892146 74892186 41 CTGAGTGTACATTAGAGAAAACTGACAAAGATAAGTTTGTA CTGAGTGTACATTATAGAAAACTGACAAAGATAAGTTTGTA < 41bp 1 0.699873421549209 1 0.886166870594025 experiment 0.600253156901581 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 POLK ENSG00000122008 CDS Human protein_coding chr5:74892166 chr5:74892160 stopgain 0.435 0 hm6A_associated_SNPs_43695 0 0 1 1 74892150 74892172 mRNA hsa-miR-223 POLK miRanda miRanda
14034 chrX 153669466 153669466 1 + C T LGG 153669478 + 153669458 153669498 41 TGGGGGGACATATATGCTGAACAAACCTGTGGATGACATCA TGGGGGGATATATATGCTGAACAAACCTGTGGATGACATCA < 41bp 1 0.787913007345861 1 0.765204071998596 experiment 0.424173985308278 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 9 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669478 chrX:153669466 nonsynonymous SNV 0.910 3 hm6A_associated_SNPs_43708 0 0 1 3 153669455 153669478 mRNA hsa-miR-103 GDI1 miRanda miRanda
14034 chrX 153669466 153669466 1 + C T LGG 153669478 + 153669458 153669498 41 TGGGGGGACATATATGCTGAACAAACCTGTGGATGACATCA TGGGGGGATATATATGCTGAACAAACCTGTGGATGACATCA < 41bp 1 0.787913007345861 1 0.765204071998596 experiment 0.424173985308278 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 9 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669478 chrX:153669466 nonsynonymous SNV 0.910 3 hm6A_associated_SNPs_43708 0 0 1 3 153669455 153669478 mRNA hsa-miR-107 GDI1 miRanda miRanda
14034 chrX 153669466 153669466 1 + C T LGG 153669478 + 153669458 153669498 41 TGGGGGGACATATATGCTGAACAAACCTGTGGATGACATCA TGGGGGGATATATATGCTGAACAAACCTGTGGATGACATCA < 41bp 1 0.787913007345861 1 0.765204071998596 experiment 0.424173985308278 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 9 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669478 chrX:153669466 nonsynonymous SNV 0.910 3 hm6A_associated_SNPs_43708 0 0 1 3 153669457 153669478 mRNA hsa-miR-338-3p GDI1 miRanda miRanda
14034 chrX 153669466 153669466 1 + C T LGG 153669482 + 153669462 153669502 41 GGGACATATATGCTGAACAAACCTGTGGATGACATCATCAT GGGATATATATGCTGAACAAACCTGTGGATGACATCATCAT < 41bp 1 0.325380932537849 1 0.78760176897049 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669482 chrX:153669466 nonsynonymous SNV 0.910 3 hm6A_associated_SNPs_43709 0 0 1 3 153669455 153669478 mRNA hsa-miR-103 GDI1 miRanda miRanda
14034 chrX 153669466 153669466 1 + C T LGG 153669482 + 153669462 153669502 41 GGGACATATATGCTGAACAAACCTGTGGATGACATCATCAT GGGATATATATGCTGAACAAACCTGTGGATGACATCATCAT < 41bp 1 0.325380932537849 1 0.78760176897049 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669482 chrX:153669466 nonsynonymous SNV 0.910 3 hm6A_associated_SNPs_43709 0 0 1 3 153669455 153669478 mRNA hsa-miR-107 GDI1 miRanda miRanda
14034 chrX 153669466 153669466 1 + C T LGG 153669482 + 153669462 153669502 41 GGGACATATATGCTGAACAAACCTGTGGATGACATCATCAT GGGATATATATGCTGAACAAACCTGTGGATGACATCATCAT < 41bp 1 0.325380932537849 1 0.78760176897049 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669482 chrX:153669466 nonsynonymous SNV 0.910 3 hm6A_associated_SNPs_43709 0 0 1 3 153669457 153669478 mRNA hsa-miR-338-3p GDI1 miRanda miRanda
14034 chr1 150307433 150307433 1 + A G LIHC 150307423 + 150307403 150307443 41 CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCAC CAGGAAGGTGGAGTTAAAAGACCAAACGAAGCCTACACCAC < 41bp 1 0.398583508149411 1 0.708054482936859 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307423 chr1:150307433 synonymous SNV . 0 hm6A_associated_SNPs_43772 0 0 1 1 150307424 150307445 mRNA hsa-miR-140-5p PRPF3 miRanda miRanda
14034 chr1 230410235 230410235 1 + G A LIHC 230410252 + 230410232 230410272 41 TTTGTGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA TTTATGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA < 41bp 1 0.406909788872551 1 0.104857385158539 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230410252 chr1:230410235 synonymous SNV . 0 hm6A_associated_SNPs_43773 0 0 1 2 230410224 230410242 mRNA hsa-miR-124 GALNT2 miRanda miRanda
14034 chr1 230410235 230410235 1 + G A LIHC 230410252 + 230410232 230410272 41 TTTGTGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA TTTATGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA < 41bp 1 0.406909788872551 1 0.104857385158539 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230410252 chr1:230410235 synonymous SNV . 0 hm6A_associated_SNPs_43773 0 0 1 2 230410222 230410242 mRNA hsa-miR-506 GALNT2 miRanda miRanda
14034 chr1 150307438 150307438 1 + C T LIHC 150307423 + 150307403 150307443 41 CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCAC CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTATACCAC < 41bp 1 0.397631032273342 1 0.692270874977112 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307423 chr1:150307438 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_43783 0 0 1 1 150307424 150307445 mRNA hsa-miR-140-5p PRPF3 miRanda miRanda
14034 chr9 131151971 131151971 1 + C T LIHC 131151970 + 131151950 131151990 41 GCTGGACTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCA GCTGGACTACCAGCTTCAGGATCAGGACAGCGTCCTCTTCA Direct Loss 1 0.45485900322495 1 0.858033776283264 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151970 chr9:131151971 synonymous SNV . 0 hm6A_associated_SNPs_43798 0 0 1 3 131151971 131151995 mRNA hsa-miR-143 URM1 miRanda miRanda
14034 chr9 131151971 131151971 1 + C T LIHC 131151970 + 131151950 131151990 41 GCTGGACTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCA GCTGGACTACCAGCTTCAGGATCAGGACAGCGTCCTCTTCA Direct Loss 1 0.45485900322495 1 0.858033776283264 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151970 chr9:131151971 synonymous SNV . 0 hm6A_associated_SNPs_43798 0 0 1 3 131151971 131151996 mRNA hsa-miR-185 URM1 miRanda miRanda
14034 chr9 131151971 131151971 1 + C T LIHC 131151970 + 131151950 131151990 41 GCTGGACTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCA GCTGGACTACCAGCTTCAGGATCAGGACAGCGTCCTCTTCA Direct Loss 1 0.45485900322495 1 0.858033776283264 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151970 chr9:131151971 synonymous SNV . 0 hm6A_associated_SNPs_43798 0 0 1 3 131151969 131151991 mRNA hsa-miR-488 URM1 miRanda miRanda
14034 chr9 131151971 131151971 1 + C T LIHC 131151976 + 131151956 131151996 41 CTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCATCTCCA CTACCAGCTTCAGGATCAGGACAGCGTCCTCTTCATCTCCA < 41bp 1 0.728383568176775 1 0.845633149147034 experiment 0.54323286364645 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151976 chr9:131151971 synonymous SNV . 0 hm6A_associated_SNPs_43799 0 0 1 3 131151971 131151995 mRNA hsa-miR-143 URM1 miRanda miRanda
14034 chr9 131151971 131151971 1 + C T LIHC 131151976 + 131151956 131151996 41 CTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCATCTCCA CTACCAGCTTCAGGATCAGGACAGCGTCCTCTTCATCTCCA < 41bp 1 0.728383568176775 1 0.845633149147034 experiment 0.54323286364645 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151976 chr9:131151971 synonymous SNV . 0 hm6A_associated_SNPs_43799 0 0 1 3 131151971 131151996 mRNA hsa-miR-185 URM1 miRanda miRanda
14034 chr9 131151971 131151971 1 + C T LIHC 131151976 + 131151956 131151996 41 CTACCAGCTTCAGGACCAGGACAGCGTCCTCTTCATCTCCA CTACCAGCTTCAGGATCAGGACAGCGTCCTCTTCATCTCCA < 41bp 1 0.728383568176775 1 0.845633149147034 experiment 0.54323286364645 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 URM1 ENSG00000167118 CDS Human protein_coding chr9:131151976 chr9:131151971 synonymous SNV . 0 hm6A_associated_SNPs_43799 0 0 1 3 131151969 131151991 mRNA hsa-miR-488 URM1 miRanda miRanda
14034 chr19 9452415 9452415 1 + T C LIHC 9452408 + 9452388 9452428 41 AGAGGAACTGTTTGACTTTAACCAATGTGAAAAAGCCTTGA AGAGGAACTGTTTGACTTTAACCAATGCGAAAAAGCCTTGA < 41bp 1 0.567470244314629 1 0.970621466636658 experiment 0.865059511370742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452408 chr19:9452415 synonymous SNV . 0 hm6A_associated_SNPs_43804 0 0 0 2 9452398 9452418 mRNA hsa-miR-23a ZNF559 miRanda miRanda
14034 chr19 9452415 9452415 1 + T C LIHC 9452408 + 9452388 9452428 41 AGAGGAACTGTTTGACTTTAACCAATGTGAAAAAGCCTTGA AGAGGAACTGTTTGACTTTAACCAATGCGAAAAAGCCTTGA < 41bp 1 0.567470244314629 1 0.970621466636658 experiment 0.865059511370742 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 28 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452408 chr19:9452415 synonymous SNV . 0 hm6A_associated_SNPs_43804 0 0 0 2 9452398 9452418 mRNA hsa-miR-23b ZNF559 miRanda miRanda
14034 chr19 9452415 9452415 1 + T C LIHC 9452433 + 9452413 9452453 41 TGTGAAAAAGCCTTGAGTGAACACTCATGCCTTAAGACTCA TGCGAAAAAGCCTTGAGTGAACACTCATGCCTTAAGACTCA < 41bp 1 0.537568629701837 1 0.984759151935577 experiment 0.924862740596326 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 3 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452433 chr19:9452415 synonymous SNV . 0 hm6A_associated_SNPs_43805 0 0 0 2 9452398 9452418 mRNA hsa-miR-23a ZNF559 miRanda miRanda
14034 chr19 9452415 9452415 1 + T C LIHC 9452433 + 9452413 9452453 41 TGTGAAAAAGCCTTGAGTGAACACTCATGCCTTAAGACTCA TGCGAAAAAGCCTTGAGTGAACACTCATGCCTTAAGACTCA < 41bp 1 0.537568629701837 1 0.984759151935577 experiment 0.924862740596326 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 3 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452433 chr19:9452415 synonymous SNV . 0 hm6A_associated_SNPs_43805 0 0 0 2 9452398 9452418 mRNA hsa-miR-23b ZNF559 miRanda miRanda
14034 chr3 10108913 10108913 1 + G T LIHC 10108917 + 10108897 10108937 41 TAAATGCCTTCTGCCAGGAAACATCACCTGAGATGAAGGGG TAAATGCCTTCTGCCATGAAACATCACCTGAGATGAAGGGG < 41bp 1 0.499496064493637 1 0.00583979487419128 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 17 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10108917 chr3:10108913 nonsynonymous SNV 0.924 0 hm6A_associated_SNPs_43832 0 0 1 1 10108905 10108927 mRNA hsa-miR-125a-3p FANCD2 miRanda miRanda
14034 chr5 70820149 70820149 1 + A G LIHC 70820139 + 70820119 70820159 41 TTTCTGCTCAGATTGAGGAAACAATGGAAGAGGTTCGGTTT TTTCTGCTCAGATTGAGGAAACAATGGAAGGGGTTCGGTTT < 41bp 1 0.595666984125475 1 0.959031283855438 experiment 0.808666031749051 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70820139 chr5:70820149 nonsynonymous SNV 0.983 4 hm6A_associated_SNPs_43847 0 0 0 2 70820145 70820150 mRNA hsa-miR-27a BDP1 miRanda miRanda
14034 chr5 70820149 70820149 1 + A G LIHC 70820139 + 70820119 70820159 41 TTTCTGCTCAGATTGAGGAAACAATGGAAGAGGTTCGGTTT TTTCTGCTCAGATTGAGGAAACAATGGAAGGGGTTCGGTTT < 41bp 1 0.595666984125475 1 0.959031283855438 experiment 0.808666031749051 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70820139 chr5:70820149 nonsynonymous SNV 0.983 4 hm6A_associated_SNPs_43847 0 0 0 2 70820145 70820150 mRNA hsa-miR-27b BDP1 miRanda miRanda
14034 chr12 98931284 98931284 1 + A G LIHC 98931287 + 98931267 98931307 41 CTCAAGCTTGAGAAGAGAGAACCACTAAAGGGCAGAGCAAA CTCAAGCTTGAGAAGAGGGAACCACTAAAGGGCAGAGCAAA < 41bp 1 0.208483251470391 1 0.445483326911926 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 TMPO ENSG00000120802 CDS Human protein_coding chr12:98931287 chr12:98931284 synonymous SNV . 0 hm6A_associated_SNPs_43863 0 0 1 1 98931272 98931293 mRNA hsa-miR-140-5p TMPO miRanda miRanda
14034 chr11 117030680 117030680 1 + A G LIHC 117030678 + 117030658 117030698 41 ATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGT ATTTGTTTTGGACTGTAAAGACGAAGAGCCTGATGTACTGT Direct Loss 1 0.387262766214006 1 0.90335738658905 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117030678 chr11:117030680 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_43875 0 0 1 1 117030679 117030699 mRNA hsa-miR-101 PAFAH1B2 miRanda miRanda
14034 chr7 107216972 107216972 1 + T C LIHC 107216984 + 107216964 107217004 41 ACCTGTAATTGCTAATGGAGACATCAGAAGCTTAAAGGAAG ACCTGTAACTGCTAATGGAGACATCAGAAGCTTAAAGGAAG < 41bp 1 0.785170665540229 1 0.769940495491028 experiment 0.429658668919542 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 DUS4L ENSG00000105865 CDS Human protein_coding chr7:107216984 chr7:107216972 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_43882 0 0 1 1 107216962 107216984 mRNA hsa-miR-136 DUS4L miRanda miRanda
14034 chr6 135515588 135515588 1 + A G LIHC 135515583 + 135515563 135515603 41 ACCGAGAATGAGCTAAAAGGACAGCAGGTGCTACCAGTAAG ACCGAGAATGAGCTAAAAGGACAGCGGGTGCTACCAGTAAG < 41bp 1 0.619268208780747 1 0.921501636505127 experiment 0.761463582438507 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 26 MYB ENSG00000118513 CDS Human protein_coding chr6:135515583 chr6:135515588 nonsynonymous SNV 0.795 3 hm6A_associated_SNPs_43896 0 0 1 1 135515570 135515591 mRNA hsa-miR-370 MYB miRanda miRanda
14034 chr10 69881741 69881741 1 + G T LIHC 69881734 + 69881714 69881754 41 TAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT TAGACCTCGTGCCTGCAAAAACCACAATAGTAAACTGGAAT < 41bp 1 0.709792279973263 1 0.991707563400269 experiment 0.580415440053473 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881734 chr10:69881741 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_43909 0 0 0 1 69881731 69881753 mRNA hsa-miR-145 MYPN miRanda miRanda
14034 chr10 69881741 69881741 1 + G T LIHC 69881747 + 69881727 69881767 41 TGCAAAAACCACAAGAGTAAACTGGAATCTCAAAACAAAGT TGCAAAAACCACAATAGTAAACTGGAATCTCAAAACAAAGT < 41bp 1 0.788002440531408 1 0.994594693183899 experiment 0.423995118937184 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881747 chr10:69881741 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_43910 0 0 0 1 69881731 69881753 mRNA hsa-miR-145 MYPN miRanda miRanda
14034 chr14 74156149 74156149 1 + A G LIHC 74156151 + 74156131 74156171 41 GGCAATCCCTTGGAAGAGAAACATTCTGCTGAGAATAACTG GGCAATCCCTTGGAAGAGGAACATTCTGCTGAGAATAACTG < 41bp 1 0.498797068978696 1 0.356251537799835 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 19 DNAL1 ENSG00000119661 CDS Human protein_coding chr14:74156151 chr14:74156149 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_43918 0 0 0 1 74156149 74156174 mRNA hsa-miR-145 DNAL1 miRanda miRanda
14034 chr16 85706072 85706072 1 + A G LIHC 85706067 + 85706047 85706087 41 AGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTG AGGGAGCGGCTCCAGGCAGAACTGGGCCACTTACGAAAGTG < 41bp 1 0.7428897878944 1 0.915846824645996 experiment 0.514220424211201 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 26 GSE1 ENSG00000131149 CDS Human protein_coding chr16:85706067 chr16:85706072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_43925 0 0 1 2 85706072 85706092 mRNA hsa-miR-124 KIAA0182 miRanda miRanda
14034 chr16 85706072 85706072 1 + A G LIHC 85706067 + 85706047 85706087 41 AGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTG AGGGAGCGGCTCCAGGCAGAACTGGGCCACTTACGAAAGTG < 41bp 1 0.7428897878944 1 0.915846824645996 experiment 0.514220424211201 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 26 GSE1 ENSG00000131149 CDS Human protein_coding chr16:85706067 chr16:85706072 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_43925 0 0 1 2 85706072 85706092 mRNA hsa-miR-506 KIAA0182 miRanda miRanda
14034 chr8 68007674 68007674 1 + A G LIHC 68007688 + 68007668 68007708 41 CCAAAGACGACTAGAGGAGGACAGATACCGACAACTAGATG CCAAAGGCGACTAGAGGAGGACAGATACCGACAACTAGATG < 41bp 1 0.612699639429935 1 0.988935589790344 experiment 0.77460072114013 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68007688 chr8:68007674 synonymous SNV . 0 hm6A_associated_SNPs_43942 0 0 1 1 68007650 68007674 mRNA hsa-miR-9 CSPP1 miRanda miRanda
14034 chr10 27035393 27035393 1 + A G LIHC 27035402 + 27035382 27035422 41 GTACTCACAAGAGATAAATGACAACTCTTTCTGTTCTTTCT GTACTCACAAGGGATAAATGACAACTCTTTCTGTTCTTTCT < 41bp 1 0.626148779087045 1 0.806644678115845 experiment 0.747702441825909 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 12 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035402 chr10:27035393 synonymous SNV . 0 hm6A_associated_SNPs_43971 0 0 1 1 27035375 27035398 mRNA hsa-miR-216b PDSS1 miRanda miRanda
14034 chr16 89804389 89804389 1 - A G LIHC 89804376 - 89804356 89804396 41 ACAGACCTCACACCTGGGGGACAGAGGCAGATAAGAAGGTG ACAGACCCCACACCTGGGGGACAGAGGCAGATAAGAAGGTG < 41bp 1 0.769929778023179 1 0.877009809017181 experiment 0.460140443953642 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 8 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804376 chr16:89804389 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_43995 0 0 1 1 89804367 89804389 mRNA hsa-miR-874 FANCA miRanda miRanda
14034 chr16 89804389 89804389 1 - A G LIHC 89804400 - 89804380 89804420 41 TGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGG TGCCCGCTGCCTGCACTGGAACCCACAGACCCCACACCTGG < 41bp 1 0.788559138419014 1 0.728594779968262 experiment 0.422881723161972 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804400 chr16:89804389 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_43996 0 0 1 1 89804367 89804389 mRNA hsa-miR-874 FANCA miRanda miRanda
14034 chr17 42225541 42225541 1 + A G LIHC 42225523 + 42225503 42225543 41 TTGGCAATCAGAGAAGAGTGACAGTGACAGAAGTGCTCAGA TTGGCAATCAGAGAAGAGTGACAGTGACAGAAGTGCTCGGA < 41bp 1 0.778143319279059 1 0.961926579475403 experiment 0.443713361441882 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225523 chr17:42225541 nonsynonymous SNV 0.005 1 hm6A_associated_SNPs_44022 0 0 0 1 42225538 42225557 mRNA hsa-miR-431 C17orf53 miRanda miRanda
14034 chr18 23872245 23872245 1 + A G LIHC 23872242 + 23872222 23872262 41 CCTTCAGGAGGCAATGAAAAACAAGTGACCACAATTTCACA CCTTCAGGAGGCAATGAAAAACAGGTGACCACAATTTCACA < 41bp 1 0.433330524416984 1 0.0842878818511963 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 24 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23872242 chr18:23872245 synonymous SNV . 0 hm6A_associated_SNPs_44023 0 0 0 1 23872233 23872256 mRNA hsa-miR-599 TAF4B miRanda miRanda
14034 chr19 50185212 50185212 1 + A G LIHC 50185222 + 50185202 50185242 41 CCGCAACTCCATGTTTCATAACCGGCACCTCTTCAAGGACA CCGCAACTCCGTGTTTCATAACCGGCACCTCTTCAAGGACA < 41bp 1 0.319207679102151 1 0.211053907871246 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50185222 chr19:50185212 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_44024 0 0 1 1 50185198 50185219 mRNA hsa-miR-494 PRMT1 miRanda miRanda
14034 chr5 170395357 170395357 1 + T C LIHC 170395346 + 170395326 170395366 41 TCTTGGATCAGTTTCGTAAAACATATGTTGGTGATCAACTT TCTTGGATCAGTTTCGTAAAACATATGTTGGCGATCAACTT < 41bp 1 0.290403198311335 1 0.459411799907684 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 RANBP17 ENSG00000204764 CDS Human protein_coding chr5:170395346 chr5:170395357 synonymous SNV . 0 hm6A_associated_SNPs_44027 0 0 0 1 170395345 170395367 mRNA hsa-miR-382 RANBP17 miRanda miRanda
14034 chr22 19118965 19118965 1 - T C LIHC 19118975 - 19118955 19118995 41 GATTTGACTTTTGCGTAGGAACCCTTGCCAAGATTGATGCC GATTTGACTTTTGCGTAGGAACCCTTGCCAGGATTGATGCC < 41bp 1 0.344470520574043 1 0.993163466453552 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 31 TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19118975 chr22:19118965 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_44052 0 0 1 1 19118964 19118988 mRNA hsa-miR-182 DGCR14 miRanda miRanda
14034 chr2 277013 277013 1 + C T LIHC 277031 + 277011 277051 41 ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC ACTTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC < 41bp 1 0.576127882134889 1 0.903885126113892 experiment 0.847744235730222 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 3 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277031 chr2:277013 synonymous SNV . 0 hm6A_associated_SNPs_44070 0 0 1 1 277009 277029 mRNA hsa-miR-590-3p ACP1 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798757 72798780 mRNA hsa-miR-17 BTF3 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798758 72798780 mRNA hsa-miR-20a BTF3 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798758 72798780 mRNA hsa-miR-93 BTF3 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798757 72798780 mRNA hsa-miR-106a BTF3 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798760 72798780 mRNA hsa-miR-106b BTF3 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798767 72798789 mRNA hsa-miR-296-3p BTF3 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798757 72798780 mRNA hsa-miR-20b BTF3 miRanda miRanda
14034 chr5 72798773 72798773 1 + C A LIHC 72798781 + 72798761 72798801 41 AGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCAT AGGAACAGTGATACACTTTAACAACCCTAAAGTTCAGGCAT < 41bp 1 0.764620138039245 1 0.33998841047287 experiment 0.470759723921511 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798781 chr5:72798773 synonymous SNV . 0 hm6A_associated_SNPs_44132 0 0 1 8 72798759 72798780 mRNA hsa-miR-519d BTF3 miRanda miRanda
14034 chr14 95078741 95078741 1 + G A LIHC 95078738 + 95078718 95078758 41 ATGAAAATCCACTACTCCAGACAGACGGCTTTGGAATCCAC ATGAAAATCCACTACTCCAGACAAACGGCTTTGGAATCCAC < 41bp 1 0.171986270663097 1 0.0560597777366638 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 24 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95078738 chr14:95078741 synonymous SNV . 0 hm6A_associated_SNPs_44153 0 0 1 1 95078739 95078763 mRNA hsa-miR-138 SERPINA3 miRanda miRanda
14034 chr12 121013648 121013648 1 + A T LIHC 121013628 + 121013608 121013648 41 AGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGATA AGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGATT < 41bp 1 0.698542928319629 1 0.167790412902832 experiment 0.602914143360743 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 41 RNF10 ENSG00000022840 CDS Human protein_coding chr12:121013628 chr12:121013648 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_44196 0 0 1 1 121013644 121013667 mRNA hsa-miR-873 RNF10 miRanda miRanda
14034 chr20 29625950 29625950 1 + G A LIHC 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGAACCAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.623991303432607 1 0.509807527065277 experiment 0.752017393134787 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625950 nonsynonymous SNV 0.942 2 hm6A_associated_SNPs_44258 0 0 1 2 29625935 29625956 mRNA hsa-miR-133a FRG1B miRanda miRanda
14034 chr20 29625950 29625950 1 + G A LIHC 29625960 + 29625940 29625980 41 GATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCA GATGCAATTGAACCAAGAGAACAATGGGAACCAGTCTTTCA < 41bp 1 0.623991303432607 1 0.509807527065277 experiment 0.752017393134787 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625960 chr20:29625950 nonsynonymous SNV 0.942 2 hm6A_associated_SNPs_44258 0 0 1 2 29625935 29625956 mRNA hsa-miR-133b FRG1B miRanda miRanda
14034 chr16 449663 449663 1 + G A LIHC 449674 + 449654 449694 41 GCCTCGAGGGCCATGATTGGACACACCGACTCGGCTGAGGC GCCTCGAGGACCATGATTGGACACACCGACTCGGCTGAGGC < 41bp 1 0.690948060002775 1 0.918280720710754 experiment 0.61810387999445 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 NME4 ENSG00000103202 CDS Human protein_coding chr16:449674 chr16:449663 nonsynonymous SNV 0.030 0 hm6A_associated_SNPs_44297 0 0 1 1 449646 449667 mRNA hsa-miR-328 NME4 miRanda miRanda
14034 chr3 179334808 179334808 1 + C A LIHC 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTACCAGAACACTGGGAATATTATAAGGT < 41bp 1 0.69688664412987 1 0.386230766773224 experiment 0.60622671174026 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334808 synonymous SNV . 0 hm6A_associated_SNPs_44366 0 0 1 2 179334795 179334821 mRNA hsa-miR-199a-5p NDUFB5 miRanda miRanda
14034 chr3 179334808 179334808 1 + C A LIHC 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTACCAGAACACTGGGAATATTATAAGGT < 41bp 1 0.69688664412987 1 0.386230766773224 experiment 0.60622671174026 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334808 synonymous SNV . 0 hm6A_associated_SNPs_44366 0 0 1 2 179334796 179334821 mRNA hsa-miR-199b-5p NDUFB5 miRanda miRanda
14034 chr17 42744070 42744070 1 + C T LIHC 42744051 + 42744031 42744071 41 AGACAAATGATACAGCTAAGACAACATTCCAAGAATATCCA AGACAAATGATACAGCTAAGACAACATTCCAAGAATATCTA < 41bp 1 0.767220312144201 1 0.929853916168213 experiment 0.465559375711597 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 40 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744051 chr17:42744070 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_44373 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr17 42744070 42744070 1 + C T LIHC 42744082 + 42744062 42744102 41 AGAATATCCACTTATCAAAAACTGTTTTACACCCCAAACTG AGAATATCTACTTATCAAAAACTGTTTTACACCCCAAACTG < 41bp 1 0.604612689291676 1 0.950993895530701 experiment 0.790774621416647 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 9 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744082 chr17:42744070 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_44374 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr18 23866170 23866170 1 + A G LIHC 23866155 + 23866135 23866175 41 CAGGAGGAACAACAGCTGGAACTGGTTTGCTTCAGACTTCA CAGGAGGAACAACAGCTGGAACTGGTTTGCTTCAGGCTTCA < 41bp 1 0.697562341040941 1 0.998443245887756 experiment 0.604875317918119 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23866155 chr18:23866170 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_44376 0 0 1 1 23866163 23866184 mRNA hsa-miR-140-5p TAF4B miRanda miRanda
14034 chr10 99517436 99517436 1 + G T LIHC 99517421 + 99517401 99517441 41 GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCGATGCT GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCTATGCT < 41bp 1 0.643873011151644 1 0.0991005301475525 experiment 0.712253977696712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99517421 chr10:99517436 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_44380 0 0 0 6 99517424 99517445 mRNA hsa-miR-15a ZFYVE27 miRanda miRanda
14034 chr10 99517436 99517436 1 + G T LIHC 99517421 + 99517401 99517441 41 GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCGATGCT GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCTATGCT < 41bp 1 0.643873011151644 1 0.0991005301475525 experiment 0.712253977696712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99517421 chr10:99517436 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_44380 0 0 0 6 99517423 99517445 mRNA hsa-miR-16 ZFYVE27 miRanda miRanda
14034 chr10 99517436 99517436 1 + G T LIHC 99517421 + 99517401 99517441 41 GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCGATGCT GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCTATGCT < 41bp 1 0.643873011151644 1 0.0991005301475525 experiment 0.712253977696712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99517421 chr10:99517436 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_44380 0 0 0 6 99517424 99517445 mRNA hsa-miR-15b ZFYVE27 miRanda miRanda
14034 chr10 99517436 99517436 1 + G T LIHC 99517421 + 99517401 99517441 41 GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCGATGCT GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCTATGCT < 41bp 1 0.643873011151644 1 0.0991005301475525 experiment 0.712253977696712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99517421 chr10:99517436 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_44380 0 0 0 6 99517425 99517445 mRNA hsa-miR-195 ZFYVE27 miRanda miRanda
14034 chr10 99517436 99517436 1 + G T LIHC 99517421 + 99517401 99517441 41 GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCGATGCT GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCTATGCT < 41bp 1 0.643873011151644 1 0.0991005301475525 experiment 0.712253977696712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99517421 chr10:99517436 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_44380 0 0 0 6 99517424 99517445 mRNA hsa-miR-424 ZFYVE27 miRanda miRanda
14034 chr10 99517436 99517436 1 + G T LIHC 99517421 + 99517401 99517441 41 GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCGATGCT GAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCTATGCT < 41bp 1 0.643873011151644 1 0.0991005301475525 experiment 0.712253977696712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99517421 chr10:99517436 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_44380 0 0 0 6 99517425 99517445 mRNA hsa-miR-497 ZFYVE27 miRanda miRanda
14034 chr1 24975424 24975424 1 + A G LIHC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGGGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.50972301262527 1 0.733878612518311 experiment 0.98055397474946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975424 synonymous SNV . 0 hm6A_associated_SNPs_44409 0 0 1 7 24975422 24975445 mRNA hsa-miR-15a SRRM1 miRanda miRanda
14034 chr1 24975424 24975424 1 + A G LIHC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGGGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.50972301262527 1 0.733878612518311 experiment 0.98055397474946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975424 synonymous SNV . 0 hm6A_associated_SNPs_44409 0 0 1 7 24975424 24975445 mRNA hsa-miR-16 SRRM1 miRanda miRanda
14034 chr1 24975424 24975424 1 + A G LIHC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGGGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.50972301262527 1 0.733878612518311 experiment 0.98055397474946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975424 synonymous SNV . 0 hm6A_associated_SNPs_44409 0 0 1 7 24975419 24975443 mRNA hsa-miR-214 SRRM1 miRanda miRanda
14034 chr1 24975424 24975424 1 + A G LIHC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGGGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.50972301262527 1 0.733878612518311 experiment 0.98055397474946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975424 synonymous SNV . 0 hm6A_associated_SNPs_44409 0 0 1 7 24975422 24975445 mRNA hsa-miR-15b SRRM1 miRanda miRanda
14034 chr1 24975424 24975424 1 + A G LIHC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGGGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.50972301262527 1 0.733878612518311 experiment 0.98055397474946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975424 synonymous SNV . 0 hm6A_associated_SNPs_44409 0 0 1 7 24975405 24975426 mRNA hsa-miR-150 SRRM1 miRanda miRanda
14034 chr1 24975424 24975424 1 + A G LIHC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGGGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.50972301262527 1 0.733878612518311 experiment 0.98055397474946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975424 synonymous SNV . 0 hm6A_associated_SNPs_44409 0 0 1 7 24975421 24975445 mRNA hsa-miR-424 SRRM1 miRanda miRanda
14034 chr1 24975424 24975424 1 + A G LIHC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGGGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.50972301262527 1 0.733878612518311 experiment 0.98055397474946 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975424 synonymous SNV . 0 hm6A_associated_SNPs_44409 0 0 1 7 24975423 24975445 mRNA hsa-miR-497 SRRM1 miRanda miRanda
14034 chr3 160129755 160129755 1 + A G LIHC 160129750 + 160129730 160129770 41 TGATGAAACCAAAAGGCCAGACTGAACACGATGAGGGTATG TGATGAAACCAAAAGGCCAGACTGAGCACGATGAGGGTATG < 41bp 1 0.336080118452248 1 0.940925002098083 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129750 chr3:160129755 synonymous SNV . 0 hm6A_associated_SNPs_44419 0 0 1 1 160129748 160129770 mRNA hsa-miR-875-5p SMC4 miRanda miRanda
14034 chr9 112930750 112930750 1 + C A LIHC 112930767 + 112930747 112930787 41 TGCCAACCAGGAGGAAGAAGACAACGAATAAACTTCCTTCA TGCAAACCAGGAGGAAGAAGACAACGAATAAACTTCCTTCA < 41bp 1 0.763560961193245 1 0.98828649520874 experiment 0.472878077613509 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 CDS Human other chr9:112930767 chr9:112930750 synonymous SNV . 0 hm6A_associated_SNPs_44427 0 0 1 1 112930730 112930751 mRNA hsa-miR-31 AKAP2 miRanda miRanda
14034 chr4 54310235 54310235 1 + A G LIHC 54310218 + 54310198 54310238 41 ATCTTTTTCTTCAACAGTGGACATTCCTCTGGTTATGATAG ATCTTTTTCTTCAACAGTGGACATTCCTCTGGTTATGGTAG < 41bp 1 0.415057281977068 1 0.603808462619781 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 38 FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54310218 chr4:54310235 nonsynonymous SNV 0.988 4 hm6A_associated_SNPs_44492 0 0 1 1 54310226 54310250 mRNA hsa-miR-19a FIP1L1 miRanda miRanda
14034 chr8 95888316 95888316 1 + T C LIHC 95888336 + 95888316 95888356 41 TCAGTTCCTCAGAGAAATTGACTACAAAACAGCGTTTAAAT CCAGTTCCTCAGAGAAATTGACTACAAAACAGCGTTTAAAT < 41bp 1 0.32259247881158 1 0.521220326423645 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 INTS8 ENSG00000164941 CDS Human protein_coding chr8:95888336 chr8:95888316 synonymous SNV . 0 hm6A_associated_SNPs_44494 0 0 1 1 95888303 95888326 mRNA hsa-miR-146a INTS8 miRanda miRanda
14034 chr16 29979380 29979380 1 + C T LIHC 29979399 + 29979379 29979419 41 CCAGGGTGACCACAGAAAGGACTGCAGGAACCTGCCTATAT CTAGGGTGACCACAGAAAGGACTGCAGGAACCTGCCTATAT < 41bp 1 0.550306295444815 1 0.750962436199188 experiment 0.899387409110369 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29979399 chr16:29979380 synonymous SNV . 0 hm6A_associated_SNPs_44496 0 0 1 1 29979361 29979384 mRNA hsa-miR-370 TMEM219 miRanda miRanda
14034 chr19 1271158 1271158 1 + G C LIHC 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGACAGCGAGACCCAGAGATCTC < 41bp 1 0.399327755477413 1 0.624203205108643 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 25 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271158 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_44526 0 0 1 3 1271147 1271170 mRNA hsa-miR-330-5p CIRBP miRanda miRanda
14034 chr19 1271158 1271158 1 + G C LIHC 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGACAGCGAGACCCAGAGATCTC < 41bp 1 0.399327755477413 1 0.624203205108643 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 25 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271158 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_44526 0 0 1 3 1271152 1271170 mRNA hsa-miR-326 CIRBP miRanda miRanda
14034 chr19 1271158 1271158 1 + G C LIHC 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGACAGCGAGACCCAGAGATCTC < 41bp 1 0.399327755477413 1 0.624203205108643 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 25 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271158 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_44526 0 0 1 3 1271139 1271160 mRNA hsa-miR-339-5p CIRBP miRanda miRanda
14034 chr5 176732982 176732982 1 - C G LIHC 176732969 - 176732949 176732989 41 TCACCTGGACAGCTCTGGAGACACCAAATAAGCTAGAGGAG TCACCTGCACAGCTCTGGAGACACCAAATAAGCTAGAGGAG < 41bp 1 0.594206885010659 1 0.273431688547134 experiment 0.811586229978682 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 8 PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176732969 chr5:176732982 synonymous SNV . 0 hm6A_associated_SNPs_44532 0 0 1 1 176732975 176732997 mRNA hsa-miR-22 MXD3 miRanda miRanda
14034 chr4 44682735 44682735 1 + A G LIHC 44682725 + 44682705 44682745 41 TTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTT TTATAGGGACAATTGATAAAACAAAGAATAGTAAGCAGGTT < 41bp 1 0.600897313548856 1 0.348525822162628 experiment 0.798205372902288 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44682725 chr4:44682735 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_44544 0 0 0 5 44682722 44682742 mRNA hsa-miR-21 GUF1 miRanda miRanda
14034 chr4 44682735 44682735 1 + A G LIHC 44682725 + 44682705 44682745 41 TTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTT TTATAGGGACAATTGATAAAACAAAGAATAGTAAGCAGGTT < 41bp 1 0.600897313548856 1 0.348525822162628 experiment 0.798205372902288 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44682725 chr4:44682735 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_44544 0 0 0 5 44682731 44682753 mRNA hsa-miR-361-5p GUF1 miRanda miRanda
14034 chr4 44682735 44682735 1 + A G LIHC 44682725 + 44682705 44682745 41 TTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTT TTATAGGGACAATTGATAAAACAAAGAATAGTAAGCAGGTT < 41bp 1 0.600897313548856 1 0.348525822162628 experiment 0.798205372902288 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44682725 chr4:44682735 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_44544 0 0 0 5 44682723 44682744 mRNA hsa-miR-370 GUF1 miRanda miRanda
14034 chr4 44682735 44682735 1 + A G LIHC 44682725 + 44682705 44682745 41 TTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTT TTATAGGGACAATTGATAAAACAAAGAATAGTAAGCAGGTT < 41bp 1 0.600897313548856 1 0.348525822162628 experiment 0.798205372902288 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44682725 chr4:44682735 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_44544 0 0 0 5 44682725 44682746 mRNA hsa-miR-490-3p GUF1 miRanda miRanda
14034 chr4 44682735 44682735 1 + A G LIHC 44682725 + 44682705 44682745 41 TTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTT TTATAGGGACAATTGATAAAACAAAGAATAGTAAGCAGGTT < 41bp 1 0.600897313548856 1 0.348525822162628 experiment 0.798205372902288 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44682725 chr4:44682735 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_44544 0 0 0 5 44682722 44682742 mRNA hsa-miR-590-5p GUF1 miRanda miRanda
14034 chr12 49919817 49919817 1 + A G LIHC 49919797 + 49919777 49919817 41 AAAGTCCAATGACCCCATGAACCAAGGGCGGCATGACAGTA AAAGTCCAATGACCCCATGAACCAAGGGCGGCATGACAGTG < 41bp 1 0.77124345939837 1 0.789735555648804 experiment 0.457513081203261 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919797 chr12:49919817 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_44545 0 0 1 2 49919804 49919825 mRNA hsa-miR-551a SPATS2 miRanda miRanda
14034 chr12 49919817 49919817 1 + A G LIHC 49919797 + 49919777 49919817 41 AAAGTCCAATGACCCCATGAACCAAGGGCGGCATGACAGTA AAAGTCCAATGACCCCATGAACCAAGGGCGGCATGACAGTG < 41bp 1 0.77124345939837 1 0.789735555648804 experiment 0.457513081203261 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919797 chr12:49919817 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_44545 0 0 1 2 49919804 49919825 mRNA hsa-miR-551b SPATS2 miRanda miRanda
14034 chr12 49919817 49919817 1 + A G LIHC 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTGTGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.790596341789307 1 0.732381939888 experiment 0.418807316421385 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 5 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919817 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_44546 0 0 1 2 49919804 49919825 mRNA hsa-miR-551a SPATS2 miRanda miRanda
14034 chr12 49919817 49919817 1 + A G LIHC 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTGTGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.790596341789307 1 0.732381939888 experiment 0.418807316421385 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 5 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919817 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_44546 0 0 1 2 49919804 49919825 mRNA hsa-miR-551b SPATS2 miRanda miRanda
14034 chr19 804341 804341 1 + A G LIHC 804338 + 804318 804358 41 GGCTGCCAACACCATGGTGAACTACTACACCTCGGTGACCC GGCTGCCAACACCATGGTGAACTGCTACACCTCGGTGACCC < 41bp 1 0.281161327724012 1 0.994526028633118 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804338 chr19:804341 nonsynonymous SNV 0.534 3 hm6A_associated_SNPs_44556 0 0 1 1 804328 804351 mRNA hsa-let-7i PTBP1 miRanda miRanda
14034 chr12 69986800 69986800 1 + A G LIHC 69986781 + 69986761 69986801 41 TGGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAG TGGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCGG < 41bp 1 0.315635183724985 1 0.957555651664734 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69986781 chr12:69986800 synonymous SNV . 0 hm6A_associated_SNPs_44558 0 0 1 1 69986783 69986804 mRNA hsa-miR-544 CCT2 miRanda miRanda
14034 chr10 91498042 91498042 1 + G A LIHC 91498051 + 91498031 91498071 41 GGAAAGAGAGCGCTTTCAGAACTTACACAAGGTGTTACTTG GGAAAGAGAGCACTTTCAGAACTTACACAAGGTGTTACTTG < 41bp 1 0.748524496479412 1 0.989605307579041 experiment 0.502951007041176 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 KIF20B ENSG00000138182 CDS Human protein_coding chr10:91498051 chr10:91498042 synonymous SNV . 0 hm6A_associated_SNPs_44579 0 0 1 1 91498028 91498049 mRNA hsa-miR-488 KIF20B miRanda miRanda
14034 chr5 76332464 76332464 1 + G T LIHC 76332477 + 76332457 76332497 41 CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATGAA CAGAAGCTGCTGTATCACAGACTGGATTTAGTTATGATGAA < 41bp 1 0.453499391445101 1 0.955259025096893 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 8 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332477 chr5:76332464 synonymous SNV . 0 hm6A_associated_SNPs_44631 0 0 1 1 76332461 76332483 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGA < 41bp 1 0.520784133598169 1 0.990272581577301 experiment 0.958431732803663 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44638 0 0 1 7 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGA < 41bp 1 0.520784133598169 1 0.990272581577301 experiment 0.958431732803663 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44638 0 0 1 7 9453169 9453193 mRNA hsa-miR-181a ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGA < 41bp 1 0.520784133598169 1 0.990272581577301 experiment 0.958431732803663 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44638 0 0 1 7 9453169 9453193 mRNA hsa-miR-181b ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGA < 41bp 1 0.520784133598169 1 0.990272581577301 experiment 0.958431732803663 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44638 0 0 1 7 9453172 9453193 mRNA hsa-miR-181c ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGA < 41bp 1 0.520784133598169 1 0.990272581577301 experiment 0.958431732803663 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44638 0 0 1 7 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGA < 41bp 1 0.520784133598169 1 0.990272581577301 experiment 0.958431732803663 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44638 0 0 1 7 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGA < 41bp 1 0.520784133598169 1 0.990272581577301 experiment 0.958431732803663 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44638 0 0 1 7 9453165 9453193 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGAAGAAAAGCCT < 41bp 1 0.54488422159924 1 0.988101243972778 experiment 0.91023155680152 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44639 0 0 1 7 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGAAGAAAAGCCT < 41bp 1 0.54488422159924 1 0.988101243972778 experiment 0.91023155680152 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44639 0 0 1 7 9453169 9453193 mRNA hsa-miR-181a ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGAAGAAAAGCCT < 41bp 1 0.54488422159924 1 0.988101243972778 experiment 0.91023155680152 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44639 0 0 1 7 9453169 9453193 mRNA hsa-miR-181b ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGAAGAAAAGCCT < 41bp 1 0.54488422159924 1 0.988101243972778 experiment 0.91023155680152 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44639 0 0 1 7 9453172 9453193 mRNA hsa-miR-181c ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGAAGAAAAGCCT < 41bp 1 0.54488422159924 1 0.988101243972778 experiment 0.91023155680152 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44639 0 0 1 7 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGAAGAAAAGCCT < 41bp 1 0.54488422159924 1 0.988101243972778 experiment 0.91023155680152 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44639 0 0 1 7 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453173 9453173 1 + G A LIHC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGAAGAAAAGCCT < 41bp 1 0.54488422159924 1 0.988101243972778 experiment 0.91023155680152 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453173 nonsynonymous SNV 0.961 3 hm6A_associated_SNPs_44639 0 0 1 7 9453165 9453193 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr2 74185303 74185303 1 + A G LIHC 74185296 + 74185276 74185316 41 CCACTTTGAGGCTCTGATGAACATTCCAGTGCTGGTGTTGG CCACTTTGAGGCTCTGATGAACATTCCGGTGCTGGTGTTGG < 41bp 1 0.580219468414108 1 0.7570641040802 experiment 0.839561063171783 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 DGUOK ENSG00000114956 CDS Human protein_coding chr2:74185296 chr2:74185303 synonymous SNV . 0 hm6A_associated_SNPs_44658 0 0 1 3 74185282 74185303 mRNA hsa-miR-1 DGUOK miRanda miRanda
14034 chr2 74185303 74185303 1 + A G LIHC 74185296 + 74185276 74185316 41 CCACTTTGAGGCTCTGATGAACATTCCAGTGCTGGTGTTGG CCACTTTGAGGCTCTGATGAACATTCCGGTGCTGGTGTTGG < 41bp 1 0.580219468414108 1 0.7570641040802 experiment 0.839561063171783 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 DGUOK ENSG00000114956 CDS Human protein_coding chr2:74185296 chr2:74185303 synonymous SNV . 0 hm6A_associated_SNPs_44658 0 0 1 3 74185282 74185303 mRNA hsa-miR-206 DGUOK miRanda miRanda
14034 chr2 74185303 74185303 1 + A G LIHC 74185296 + 74185276 74185316 41 CCACTTTGAGGCTCTGATGAACATTCCAGTGCTGGTGTTGG CCACTTTGAGGCTCTGATGAACATTCCGGTGCTGGTGTTGG < 41bp 1 0.580219468414108 1 0.7570641040802 experiment 0.839561063171783 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 DGUOK ENSG00000114956 CDS Human protein_coding chr2:74185296 chr2:74185303 synonymous SNV . 0 hm6A_associated_SNPs_44658 0 0 1 3 74185284 74185303 mRNA hsa-miR-613 DGUOK miRanda miRanda
14034 chr1 168169255 168169255 1 + G T LIHC 168169247 + 168169227 168169267 41 TCCAGAAAGAATTGATCCTAACCCAGCAGACTCACAAAAAA TCCAGAAAGAATTGATCCTAACCCAGCATACTCACAAAAAA < 41bp 1 0.498666181205431 1 0.500306129455566 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 TIPRL ENSG00000143155 CDS Human protein_coding chr1:168169247 chr1:168169255 nonsynonymous SNV 0.562 1 hm6A_associated_SNPs_44659 0 0 1 1 168169243 168169264 mRNA hsa-miR-758 TIPRL miRanda miRanda
14034 chr1 168169255 168169255 1 + G T LIHC 168169256 + 168169236 168169276 41 AATTGATCCTAACCCAGCAGACTCACAAAAAAGTACACAAG AATTGATCCTAACCCAGCATACTCACAAAAAAGTACACAAG Direct Loss 1 0.799205222087195 1 0.746680796146393 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 TIPRL ENSG00000143155 CDS Human protein_coding chr1:168169256 chr1:168169255 nonsynonymous SNV 0.562 1 hm6A_associated_SNPs_44660 0 0 1 1 168169243 168169264 mRNA hsa-miR-758 TIPRL miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676214 95676240 mRNA hsa-let-7a VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676220 95676240 mRNA hsa-let-7b VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676215 95676240 mRNA hsa-let-7c VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676214 95676240 mRNA hsa-let-7d VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676220 95676240 mRNA hsa-let-7e VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676214 95676240 mRNA hsa-let-7f VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676215 95676240 mRNA hsa-miR-98 VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676220 95676240 mRNA hsa-let-7g VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676220 95676240 mRNA hsa-let-7i VEZT miRanda miRanda
14034 chr12 95676231 95676231 1 + G T LIHC 95676224 + 95676204 95676244 41 ATCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCT ATCGTATCTTATCTGATGTGACTCAAGTTCTACCTCATGCT < 41bp 1 0.333201925990079 1 0.16041561961174 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676224 chr12:95676231 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_44772 0 0 1 10 95676218 95676238 mRNA hsa-miR-379 VEZT miRanda miRanda
14034 chr1 211451573 211451573 1 + C A LIHC 211451566 + 211451546 211451586 41 GCTCGTAAACTAGCTAATAGACATAATCAGGGTGACAGGTA GCTCGTAAACTAGCTAATAGACATAATAAGGGTGACAGGTA < 41bp 1 0.608758861802726 1 0.0342496931552887 experiment 0.782482276394547 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211451566 chr1:211451573 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_44784 0 0 1 3 211451572 211451583 mRNA hsa-miR-181b RCOR3 miRanda miRanda
14034 chr1 211451573 211451573 1 + C A LIHC 211451566 + 211451546 211451586 41 GCTCGTAAACTAGCTAATAGACATAATCAGGGTGACAGGTA GCTCGTAAACTAGCTAATAGACATAATAAGGGTGACAGGTA < 41bp 1 0.608758861802726 1 0.0342496931552887 experiment 0.782482276394547 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211451566 chr1:211451573 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_44784 0 0 1 3 211451553 211451574 mRNA hsa-miR-190 RCOR3 miRanda miRanda
14034 chr1 211451573 211451573 1 + C A LIHC 211451566 + 211451546 211451586 41 GCTCGTAAACTAGCTAATAGACATAATCAGGGTGACAGGTA GCTCGTAAACTAGCTAATAGACATAATAAGGGTGACAGGTA < 41bp 1 0.608758861802726 1 0.0342496931552887 experiment 0.782482276394547 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211451566 chr1:211451573 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_44784 0 0 1 3 211451552 211451574 mRNA hsa-miR-190b RCOR3 miRanda miRanda
14034 chr1 235590549 235590549 1 + T C LIHC 235590531 + 235590511 235590551 41 CACATTGCTGATCAGCTCAGACACCTGGAAGTCCTTAATGT CACATTGCTGATCAGCTCAGACACCTGGAAGTCCTTAACGT < 41bp 1 0.485055083100832 1 0.0333823561668396 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 TBCE ENSG00000116957 CDS Human protein_coding chr1:235590531 chr1:235590549 synonymous SNV . 0 hm6A_associated_SNPs_44785 0 0 1 1 235590533 235590554 mRNA hsa-miR-217 TBCE miRanda miRanda
14034 chr2 182781129 182781129 1 + G A LIHC 182781132 + 182781112 182781152 41 AGTATTACATGATATTAGAAACTCACTGCAGAATCTTTCAC AGTATTACATGATATTAAAAACTCACTGCAGAATCTTTCAC < 41bp 1 0.711060647533848 1 0.840102195739746 experiment 0.577878704932304 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182781132 chr2:182781129 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_44787 0 0 1 1 182781119 182781145 mRNA hsa-miR-544 SSFA2 miRanda miRanda
14034 chr12 88439522 88439522 1 + A G LIHC 88439532 + 88439512 88439552 41 AAACACTGGAACTCATAGGAACAAATATCAATGGAAACCCA AAACACTGGAGCTCATAGGAACAAATATCAATGGAAACCCA < 41bp 1 0.575025936410585 1 0.042014867067337 experiment 0.849948127178829 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88439532 chr12:88439522 synonymous SNV . 0 hm6A_associated_SNPs_44810 0 0 1 1 88439514 88439536 mRNA hsa-miR-375 C12orf29 miRanda miRanda
14034 chr15 45707926 45707926 1 + G A LIHC 45707934 + 45707914 45707954 41 AATGAATTAGATGGTGTTGGACTTAAGACAATAGAGAGAAG AATGAATTAGATAGTGTTGGACTTAAGACAATAGAGAGAAG < 41bp 1 0.713446298446386 1 0.662980198860168 experiment 0.573107403107229 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45707934 chr15:45707926 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_44814 0 0 1 1 45707922 45707947 mRNA hsa-miR-137 SPATA5L1 miRanda miRanda
14034 chr20 17968820 17968820 1 + G T LIHC 17968837 + 17968817 17968857 41 TCTGTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT TCTTTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT < 41bp 1 0.735023176458833 1 0.00267136096954346 experiment 0.529953647082335 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17968837 chr20:17968820 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_44826 0 0 1 1 17968809 17968826 mRNA hsa-miR-377 C20orf72 miRanda miRanda
14034 chr5 70820147 70820147 1 + A G LIHC 70820139 + 70820119 70820159 41 TTTCTGCTCAGATTGAGGAAACAATGGAAGAGGTTCGGTTT TTTCTGCTCAGATTGAGGAAACAATGGAGGAGGTTCGGTTT < 41bp 1 0.624589740437617 1 0.964789092540741 experiment 0.750820519124766 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 29 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70820139 chr5:70820147 synonymous SNV . 0 hm6A_associated_SNPs_44841 0 0 0 2 70820145 70820150 mRNA hsa-miR-27a BDP1 miRanda miRanda
14034 chr5 70820147 70820147 1 + A G LIHC 70820139 + 70820119 70820159 41 TTTCTGCTCAGATTGAGGAAACAATGGAAGAGGTTCGGTTT TTTCTGCTCAGATTGAGGAAACAATGGAGGAGGTTCGGTTT < 41bp 1 0.624589740437617 1 0.964789092540741 experiment 0.750820519124766 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 29 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70820139 chr5:70820147 synonymous SNV . 0 hm6A_associated_SNPs_44841 0 0 0 2 70820145 70820150 mRNA hsa-miR-27b BDP1 miRanda miRanda
14034 chr5 118582782 118582782 1 + G A LIHC 118582771 + 118582751 118582791 41 CCATTTTTAGAAATATTGGAACTGGAGTGATGCAAATTGAG CCATTTTTAGAAATATTGGAACTGGAGTGATACAAATTGAG < 41bp 1 0.662269772172806 1 0.866495132446289 experiment 0.675460455654388 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118582771 chr5:118582782 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_44842 0 0 1 1 118582776 118582798 mRNA hsa-miR-339-5p DMXL1 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320499 48320521 mRNA hsa-miR-17 KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320499 48320521 mRNA hsa-miR-20a KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320499 48320521 mRNA hsa-miR-93 KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320499 48320521 mRNA hsa-miR-106a KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320499 48320519 mRNA hsa-miR-187 KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320493 48320513 mRNA hsa-miR-9 KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320501 48320521 mRNA hsa-miR-106b KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320499 48320521 mRNA hsa-miR-20b KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320505 48320523 mRNA hsa-miR-488 KIAA0146 miRanda miRanda
14034 chr8 48320508 48320508 1 + C A LIHC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACAA < 41bp 1 0.294511367953366 1 0.0322074890136719 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320508 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_44848 0 0 1 10 48320500 48320521 mRNA hsa-miR-519d KIAA0146 miRanda miRanda
14034 chr9 135555003 135555003 1 + A G LIHC 135555010 + 135554990 135555030 41 CGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAA CGTGAGCCAATGGGAGAGAAACTCCTGGAAATCCAAGGGAA < 41bp 1 0.746758662287251 1 0.995091557502747 experiment 0.506482675425498 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135555010 chr9:135555003 nonsynonymous SNV 0.894 2 hm6A_associated_SNPs_44849 0 0 1 1 135555003 135555024 mRNA hsa-miR-876-5p GTF3C4 miRanda miRanda
14034 chr18 13752364 13752364 1 + A G LIHC 13752381 + 13752361 13752401 41 GAGAAGGTGGATGACTATGAACATGCAGCAAAGTACATGAA GAGGAGGTGGATGACTATGAACATGCAGCAAAGTACATGAA < 41bp 1 0.686521265009508 1 0.517644107341766 experiment 0.626957469980983 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 4 RNMT ENSG00000101654 CDS Human protein_coding chr18:13752381 chr18:13752364 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_44860 0 0 1 1 13752353 13752375 mRNA hsa-miR-197 RNMT miRanda miRanda
14034 chr1 28173591 28173591 1 + G T LIHC 28173572 + 28173552 28173592 41 CTCAGTTGGTCGATTCAGGAACATGGTGCAAACTGCAGTGG CTCAGTTGGTCGATTCAGGAACATGGTGCAAACTGCAGTTG < 41bp 1 0.767795516009851 1 0.015263170003891 experiment 0.464408967980299 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28173572 chr1:28173591 synonymous SNV . 0 hm6A_associated_SNPs_44865 0 0 1 1 28173571 28173595 mRNA hsa-miR-504 PPP1R8 miRanda miRanda
14034 chr2 277039 277039 1 + G T LIHC 277031 + 277011 277051 41 ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC ACCTGCAAAGCTAAAATTGAACTACTTGTGAGCTATGATCC < 41bp 1 0.528085576353737 1 0.871466338634491 experiment 0.943828847292527 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 29 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277031 chr2:277039 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_44871 0 0 1 1 277022 277043 mRNA hsa-miR-150 ACP1 miRanda miRanda
14034 chr2 277039 277039 1 + G T LIHC 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GTGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC < 41bp 1 0.76039296262168 1 0.710350275039673 experiment 0.479214074756639 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277039 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_44872 0 0 1 1 277022 277043 mRNA hsa-miR-150 ACP1 miRanda miRanda
14034 chr2 152289719 152289719 1 + C A LIHC 152289709 + 152289689 152289729 41 TGGTGGTATTTACTGATGAGACTTGGACCTCATCTTCCTGC TGGTGGTATTTACTGATGAGACTTGGACCTAATCTTCCTGC < 41bp 1 0.192850211287344 1 0.458828985691071 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152289709 chr2:152289719 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_44875 0 0 1 1 152289710 152289732 mRNA hsa-miR-214 RIF1 miRanda miRanda
14034 chr2 71623296 71623296 1 + T C LIHC 71623276 + 71623256 71623296 41 TTCTTGTTGTTTTAGCCAAAACTGGACAAGCCAAGGCATCT TTCTTGTTGTTTTAGCCAAAACTGGACAAGCCAAGGCATCC < 41bp 1 0.0912722315435127 1 0.0184014737606049 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 41 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71623276 chr2:71623296 synonymous SNV . 0 hm6A_associated_SNPs_44997 0 0 1 1 71623280 71623301 mRNA hsa-miR-139-5p ZNF638 miRanda miRanda
14034 chr11 35211584 35211584 1 + C A LIHC 35211568 + 35211548 35211588 41 ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACA ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACAGACA < 41bp 1 0.499233574626965 1 0.962678611278534 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 37 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211568 chr11:35211584 synonymous SNV . 0 hm6A_associated_SNPs_45035 0 0 1 2 35211568 35211594 mRNA hsa-miR-210 CD44 miRanda miRanda
14034 chr11 35211584 35211584 1 + C A LIHC 35211568 + 35211548 35211588 41 ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACA ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACAGACA < 41bp 1 0.499233574626965 1 0.962678611278534 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 37 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211568 chr11:35211584 synonymous SNV . 0 hm6A_associated_SNPs_45035 0 0 1 2 35211576 35211597 mRNA hsa-miR-431 CD44 miRanda miRanda
14034 chr11 35211584 35211584 1 + C A LIHC 35211595 + 35211575 35211615 41 CTGGATCACCGACAGCACAGACAGAATCCCTGCTACCAGTA CTGGATCACAGACAGCACAGACAGAATCCCTGCTACCAGTA < 41bp 1 0.248932281424389 1 0.987343907356262 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 10 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211595 chr11:35211584 synonymous SNV . 0 hm6A_associated_SNPs_45036 0 0 1 2 35211568 35211594 mRNA hsa-miR-210 CD44 miRanda miRanda
14034 chr11 35211584 35211584 1 + C A LIHC 35211595 + 35211575 35211615 41 CTGGATCACCGACAGCACAGACAGAATCCCTGCTACCAGTA CTGGATCACAGACAGCACAGACAGAATCCCTGCTACCAGTA < 41bp 1 0.248932281424389 1 0.987343907356262 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 10 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211595 chr11:35211584 synonymous SNV . 0 hm6A_associated_SNPs_45036 0 0 1 2 35211576 35211597 mRNA hsa-miR-431 CD44 miRanda miRanda
14034 chr19 15730499 15730499 1 + T C LIHC 15730483 + 15730463 15730503 41 AGTGTTGGTGACAAGTGGAGACACCACCGTCGCTTGTGACG AGTGTTGGTGACAAGTGGAGACACCACCGTCGCTTGCGACG < 41bp 1 0.0647504465535213 1 0.0547818541526794 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 37 CYP4F8;CYP4F8 ENSG00000186526;ENSG00000186526 ncRNA_exonic;splicing Human other chr19:15730483 chr19:15730499 . 0.231 0 hm6A_associated_SNPs_45075 0 0 0 1 15730499 15730520 mRNA hsa-miR-203 CYP4F8 miRanda miRanda
14034 chr1 145281400 145281400 1 + G T LIHC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTTTCTCAT < 41bp 1 0.0720766295464597 1 0.227554827928543 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281400 synonymous SNV . 0 hm6A_associated_SNPs_45093 0 0 1 1 145281387 145281409 mRNA hsa-miR-185 NOTCH2NL miRanda miRanda
14034 chr16 2257268 2257268 1 + G T LIHC 2257248 + 2257228 2257268 41 TCCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTG TCCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTT < 41bp 1 0.723677415209768 1 0.779598474502563 experiment 0.552645169580464 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 41 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2257248 chr16:2257268 synonymous SNV . 0 hm6A_associated_SNPs_45101 0 0 1 1 2257257 2257280 mRNA hsa-miR-24 MLST8 miRanda miRanda
14034 chr15 63336290 63336290 1 + A G LIHC 63336279 + 63336259 63336299 41 CTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGGC CTCAAGGGCACCGAAGATGAACTGGACAAATGCTCTGAGGC < 41bp 1 0.464083769174612 1 0.998147964477539 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 TPM1 ENSG00000140416 CDS Human protein_coding chr15:63336279 chr15:63336290 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_45180 0 0 1 1 63336276 63336294 mRNA hsa-miR-496 TPM1 miRanda miRanda
14034 chr17 15929937 15929937 1 + A T LIHC 15929952 + 15929932 15929972 41 AGGGCATCAGATCTGGCAAGACAGATAAATCATCCTGAGCT AGGGCTTCAGATCTGGCAAGACAGATAAATCATCCTGAGCT < 41bp 1 0.617973588366611 1 0.0669514834880829 experiment 0.764052823266779 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 6 TTC19 ENSG00000011295 CDS Human protein_coding chr17:15929952 chr17:15929937 synonymous SNV . 0 hm6A_associated_SNPs_45193 0 0 1 1 15929934 15929954 mRNA hsa-miR-431 TTC19 miRanda miRanda
14034 chr17 15929940 15929940 1 + A G LIHC 15929952 + 15929932 15929972 41 AGGGCATCAGATCTGGCAAGACAGATAAATCATCCTGAGCT AGGGCATCGGATCTGGCAAGACAGATAAATCATCCTGAGCT < 41bp 1 0.622877984521178 1 0.186264336109161 experiment 0.754244030957643 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 9 TTC19 ENSG00000011295 CDS Human protein_coding chr17:15929952 chr17:15929940 synonymous SNV . 0 hm6A_associated_SNPs_45194 0 0 1 1 15929934 15929954 mRNA hsa-miR-431 TTC19 miRanda miRanda
14034 chr20 42232421 42232421 1 + C G LUAD 42232425 + 42232405 42232445 41 AATCCTGAAGAAATATCTTGACACTGGTGGAGATGTCTTTG AATCCTGAAGAAATATGTTGACACTGGTGGAGATGTCTTTG < 41bp 1 0.739854545629822 1 0.0342573821544647 experiment 0.520290908740357 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 IFT52 ENSG00000101052 CDS Human protein_coding chr20:42232425 chr20:42232421 nonsynonymous SNV 0.783 2 hm6A_associated_SNPs_45244 0 0 1 5 42232402 42232426 mRNA hsa-miR-26b IFT52 miRanda miRanda
14034 chr20 42232421 42232421 1 + C G LUAD 42232425 + 42232405 42232445 41 AATCCTGAAGAAATATCTTGACACTGGTGGAGATGTCTTTG AATCCTGAAGAAATATGTTGACACTGGTGGAGATGTCTTTG < 41bp 1 0.739854545629822 1 0.0342573821544647 experiment 0.520290908740357 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 IFT52 ENSG00000101052 CDS Human protein_coding chr20:42232425 chr20:42232421 nonsynonymous SNV 0.783 2 hm6A_associated_SNPs_45244 0 0 1 5 42232411 42232432 mRNA hsa-miR-199a-5p IFT52 miRanda miRanda
14034 chr20 42232421 42232421 1 + C G LUAD 42232425 + 42232405 42232445 41 AATCCTGAAGAAATATCTTGACACTGGTGGAGATGTCTTTG AATCCTGAAGAAATATGTTGACACTGGTGGAGATGTCTTTG < 41bp 1 0.739854545629822 1 0.0342573821544647 experiment 0.520290908740357 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 IFT52 ENSG00000101052 CDS Human protein_coding chr20:42232425 chr20:42232421 nonsynonymous SNV 0.783 2 hm6A_associated_SNPs_45244 0 0 1 5 42232411 42232432 mRNA hsa-miR-199b-5p IFT52 miRanda miRanda
14034 chr20 42232421 42232421 1 + C G LUAD 42232425 + 42232405 42232445 41 AATCCTGAAGAAATATCTTGACACTGGTGGAGATGTCTTTG AATCCTGAAGAAATATGTTGACACTGGTGGAGATGTCTTTG < 41bp 1 0.739854545629822 1 0.0342573821544647 experiment 0.520290908740357 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 IFT52 ENSG00000101052 CDS Human protein_coding chr20:42232425 chr20:42232421 nonsynonymous SNV 0.783 2 hm6A_associated_SNPs_45244 0 0 1 5 42232406 42232430 mRNA hsa-miR-454 IFT52 miRanda miRanda
14034 chr20 42232421 42232421 1 + C G LUAD 42232425 + 42232405 42232445 41 AATCCTGAAGAAATATCTTGACACTGGTGGAGATGTCTTTG AATCCTGAAGAAATATGTTGACACTGGTGGAGATGTCTTTG < 41bp 1 0.739854545629822 1 0.0342573821544647 experiment 0.520290908740357 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 IFT52 ENSG00000101052 CDS Human protein_coding chr20:42232425 chr20:42232421 nonsynonymous SNV 0.783 2 hm6A_associated_SNPs_45244 0 0 1 5 42232409 42232430 mRNA hsa-miR-301b IFT52 miRanda miRanda
14034 chr11 65271793 65271793 1 + A G LUAD 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTGCAGACTTCACAGAGAATGCAGTTG < 41bp 1 0.246716099116217 1 0.196180522441864 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271793 . . 0 hm6A_associated_SNPs_45261 0 0 1 2 65271793 65271816 lncRNA hsa-miR-6807-3p MALAT1 miRanda starBase2
14034 chr11 65271793 65271793 1 + A G LUAD 65271797 + 65271777 65271817 41 AGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTG AGCTTTTTTTTTTTTTGCAGACTTCACAGAGAATGCAGTTG < 41bp 1 0.246716099116217 1 0.196180522441864 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271797 chr11:65271793 . . 0 hm6A_associated_SNPs_45261 0 0 1 2 65271780 65271805 lncRNA hsa-miR-3611 MALAT1 miRanda starBase2
14034 chr19 44679961 44679961 1 + G C LUAD 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCCTGACTGAGTCACACAGATTGAAC < 41bp 1 0.450456168182394 1 0.843951821327209 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679961 nonsynonymous SNV 0.131 0 hm6A_associated_SNPs_45265 0 0 1 3 44679943 44679962 mRNA hsa-miR-378 ZNF226 miRanda miRanda
14034 chr19 44679961 44679961 1 + G C LUAD 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCCTGACTGAGTCACACAGATTGAAC < 41bp 1 0.450456168182394 1 0.843951821327209 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679961 nonsynonymous SNV 0.131 0 hm6A_associated_SNPs_45265 0 0 1 3 44679942 44679962 mRNA hsa-miR-422a ZNF226 miRanda miRanda
14034 chr19 44679961 44679961 1 + G C LUAD 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCCTGACTGAGTCACACAGATTGAAC < 41bp 1 0.450456168182394 1 0.843951821327209 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 32 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679961 nonsynonymous SNV 0.131 0 hm6A_associated_SNPs_45265 0 0 1 3 44679939 44679967 mRNA hsa-miR-216b ZNF226 miRanda miRanda
14034 chr19 44679961 44679961 1 + G C LUAD 44679969 + 44679949 44679989 41 GACTGAGTCACAGAGATTGAACAGAGATCAGCAAATTTCCA GACTGAGTCACACAGATTGAACAGAGATCAGCAAATTTCCA < 41bp 1 0.456853642576694 1 0.795707583427429 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679969 chr19:44679961 nonsynonymous SNV 0.131 0 hm6A_associated_SNPs_45266 0 0 1 3 44679943 44679962 mRNA hsa-miR-378 ZNF226 miRanda miRanda
14034 chr19 44679961 44679961 1 + G C LUAD 44679969 + 44679949 44679989 41 GACTGAGTCACAGAGATTGAACAGAGATCAGCAAATTTCCA GACTGAGTCACACAGATTGAACAGAGATCAGCAAATTTCCA < 41bp 1 0.456853642576694 1 0.795707583427429 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679969 chr19:44679961 nonsynonymous SNV 0.131 0 hm6A_associated_SNPs_45266 0 0 1 3 44679942 44679962 mRNA hsa-miR-422a ZNF226 miRanda miRanda
14034 chr19 44679961 44679961 1 + G C LUAD 44679969 + 44679949 44679989 41 GACTGAGTCACAGAGATTGAACAGAGATCAGCAAATTTCCA GACTGAGTCACACAGATTGAACAGAGATCAGCAAATTTCCA < 41bp 1 0.456853642576694 1 0.795707583427429 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679969 chr19:44679961 nonsynonymous SNV 0.131 0 hm6A_associated_SNPs_45266 0 0 1 3 44679939 44679967 mRNA hsa-miR-216b ZNF226 miRanda miRanda
14034 chr12 3702309 3702309 1 + G C LUAD 3702303 + 3702283 3702323 41 GTAGACTTGGATTTTAAGGGACAGCTGTGTGAAACATCTGT GTAGACTTGGATTTTAAGGGACAGCTCTGTGAAACATCTGT < 41bp 1 0.70270767973624 1 0.978811383247375 experiment 0.594584640527519 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 27 PRMT8 ENSG00000111218 CDS Human protein_coding chr12:3702303 chr12:3702309 synonymous SNV . 0 hm6A_associated_SNPs_45275 0 0 0 1 3702294 3702315 mRNA hsa-miR-377 PRMT8 miRanda miRanda
14034 chr2 27278943 27278943 1 + T C LUAD 27278936 + 27278916 27278956 41 TGGCGTTGCTTACTATGTGGACCTGCATGGACATGCTTCCA TGGCGTTGCTTACTATGTGGACCTGCACGGACATGCTTCCA < 41bp 1 0.473200307659488 1 0.963236570358276 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control 28 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278936 chr2:27278943 synonymous SNV . 0 hm6A_associated_SNPs_45290 0 0 1 1 27278920 27278945 mRNA hsa-miR-214 AGBL5 miRanda miRanda
14034 chr6 147684840 147684840 1 + G T LUAD 147684833 + 147684813 147684853 41 GTGCCAATGGACATATAATGACTTTTAGGTAAGAGTTAGAT GTGCCAATGGACATATAATGACTTTTATGTAAGAGTTAGAT < 41bp 1 0.0619127033972801 1 0.973462224006653 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 28 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684833 chr6:147684840 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_45305 0 0 0 1 147684827 147684840 mRNA hsa-miR-182 STXBP5 miRanda miRanda
14034 chr13 103514784 103514784 1 + G T LUAD 103514764 + 103514744 103514784 41 AGCAGAAGAAATGCGTATAAACAGCTCCACCGAGAACAGTG AGCAGAAGAAATGCGTATAAACAGCTCCACCGAGAACAGTT < 41bp 1 0.764621177936127 1 0.998938024044037 experiment 0.470757644127746 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514764 chr13:103514784 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_45313 0 0 0 1 103514773 103514792 mRNA hsa-miR-205 ERCC5 miRanda miRanda
14034 chr2 71653747 71653747 1 + A G LUAD 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAGAAAAGGGGGAAAACTTCCACTCCTCGTGGTGTT < 41bp 1 0.650571703813291 1 0.985793352127075 experiment 0.698856592373417 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653747 nonsynonymous SNV 0.936 1 hm6A_associated_SNPs_45334 0 0 1 2 71653731 71653752 mRNA hsa-miR-204 ZNF638 miRanda miRanda
14034 chr2 71653747 71653747 1 + A G LUAD 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAGAAAAGGGGGAAAACTTCCACTCCTCGTGGTGTT < 41bp 1 0.650571703813291 1 0.985793352127075 experiment 0.698856592373417 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653747 nonsynonymous SNV 0.936 1 hm6A_associated_SNPs_45334 0 0 1 2 71653731 71653752 mRNA hsa-miR-211 ZNF638 miRanda miRanda
14034 chr2 71653742 71653742 1 + G A LUAD 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAAAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT < 41bp 1 0.676751977644518 1 0.9842768907547 experiment 0.646496044710965 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653742 synonymous SNV . 0 hm6A_associated_SNPs_45340 0 0 1 2 71653731 71653752 mRNA hsa-miR-204 ZNF638 miRanda miRanda
14034 chr2 71653742 71653742 1 + G A LUAD 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAAAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT < 41bp 1 0.676751977644518 1 0.9842768907547 experiment 0.646496044710965 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653742 synonymous SNV . 0 hm6A_associated_SNPs_45340 0 0 1 2 71653731 71653752 mRNA hsa-miR-211 ZNF638 miRanda miRanda
14034 chr1 33292344 33292344 1 + C G LUAD 33292353 + 33292333 33292373 41 GCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTG GCTCTCTTCTTGAAACAATAACTTTCAACAGACTGTCTCTG < 41bp 1 0.726527921077924 1 0.991677641868591 experiment 0.546944157844152 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 12 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292353 chr1:33292344 stopgain 0.750 0 hm6A_associated_SNPs_45411 0 0 1 1 33292343 33292363 mRNA hsa-miR-653 S100PBP miRanda miRanda
14034 chr1 211451575 211451575 1 + G T LUAD 211451566 + 211451546 211451586 41 GCTCGTAAACTAGCTAATAGACATAATCAGGGTGACAGGTA GCTCGTAAACTAGCTAATAGACATAATCATGGTGACAGGTA < 41bp 1 0.567186863779643 1 0.0383143424987793 experiment 0.865626272440715 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211451566 chr1:211451575 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_45417 0 0 1 1 211451572 211451583 mRNA hsa-miR-181b RCOR3 miRanda miRanda
14034 chr10 17278356 17278356 1 + C G LUAD 17278375 + 17278355 17278395 41 ACGGTTGAAACTAGAGATGGACAGGTTGGTATCTTTTAAGG AGGGTTGAAACTAGAGATGGACAGGTTGGTATCTTTTAAGG < 41bp 1 0.433405173235124 1 0.517359495162964 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 2 VIM ENSG00000026025 CDS Human protein_coding chr10:17278375 chr10:17278356 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_45418 0 0 1 1 17278340 17278361 mRNA hsa-miR-451 VIM miRanda miRanda
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046479 lncRNA hsa-let-7b-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046479 lncRNA hsa-let-7c-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046476 lncRNA hsa-miR-4500 XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCCTAAAACCTACCTCTTTTCTATTGT Direct Loss 1 0.159507640472363 1 0.739996314048767 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046470 . . 0 hm6A_associated_SNPs_45462 0 0 1 11 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046479 lncRNA hsa-let-7b-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046479 lncRNA hsa-let-7c-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046476 lncRNA hsa-miR-4500 XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046470 73046470 1 - G T LUAD 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCCTAAAACCTACCTCTTTT < 41bp 1 0.339844860776975 1 0.769753754138947 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046470 . . 0 hm6A_associated_SNPs_45463 0 0 1 11 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chr2 149818584 149818584 1 + G C LUAD 149818574 + 149818554 149818594 41 TGAAAAAGAGAAAGAGAAAAACAAGACTTTGAAGAATGTTA TGAAAAAGAGAAAGAGAAAAACAAGACTTTCAAGAATGTTA < 41bp 1 0.424177929876513 1 0.256150275468826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 KIF5C ENSG00000168280 CDS Human protein_coding chr2:149818574 chr2:149818584 nonsynonymous SNV 0.992 1 hm6A_associated_SNPs_45471 0 0 1 1 149818573 149818594 mRNA hsa-miR-543 KIF5C miRanda miRanda
14034 chr10 17271973 17271973 1 + C T LUAD 17271963 + 17271943 17271983 41 GCGCGACAACCTGGCCGAGGACATCATGCGCCTCCGGGAGA GCGCGACAACCTGGCCGAGGACATCATGCGTCTCCGGGAGA < 41bp 1 0.624670265262589 1 0.999895393848419 experiment 0.750659469474823 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 VIM ENSG00000026025 CDS Human protein_coding chr10:17271963 chr10:17271973 synonymous SNV . 0 hm6A_associated_SNPs_45530 0 0 1 1 17271973 17271984 mRNA hsa-miR-505 VIM miRanda miRanda
14034 chr3 130735084 130735084 1 + G T LUAD 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTTTGTC < 41bp 1 0.684700624595711 1 0.795470416545868 experiment 0.630598750808579 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 37 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735084 nonsynonymous SNV 0.914 2 hm6A_associated_SNPs_45533 0 0 0 2 130735078 130735098 mRNA hsa-miR-378 ATP2C1 miRanda miRanda
14034 chr3 130735084 130735084 1 + G T LUAD 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTTTGTC < 41bp 1 0.684700624595711 1 0.795470416545868 experiment 0.630598750808579 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 37 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735084 nonsynonymous SNV 0.914 2 hm6A_associated_SNPs_45533 0 0 0 2 130735077 130735098 mRNA hsa-miR-422a ATP2C1 miRanda miRanda
14034 chr6 142510618 142510618 1 + T C LUAD 142510632 + 142510612 142510652 41 ATTGTTTAAAGAATGGGGAGACTCCTCAAGCAGGCCCTGTT ATTGTTCAAAGAATGGGGAGACTCCTCAAGCAGGCCCTGTT < 41bp 1 0.335956909986342 1 0.0077374279499054 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142510632 chr6:142510618 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_45545 0 0 1 1 142510615 142510638 mRNA hsa-miR-28-5p VTA1 miRanda miRanda
14034 chr2 85768989 85768989 1 + A T LUAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACTGATGAAACTGAGGTGTGTATGCCTTTA < 41bp 1 0.187890267074811 1 0.86870288848877 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768989 nonsynonymous SNV 0.997 5 hm6A_associated_SNPs_45558 0 0 1 2 85768982 85769001 mRNA hsa-miR-124 MAT2A miRanda miRanda
14034 chr2 85768989 85768989 1 + A T LUAD 85768982 + 85768962 85769002 41 TTGGCTATGCCACTGATGAAACTGAGGAGTGTATGCCTTTA TTGGCTATGCCACTGATGAAACTGAGGTGTGTATGCCTTTA < 41bp 1 0.187890267074811 1 0.86870288848877 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 MAT2A ENSG00000168906 CDS Human protein_coding chr2:85768982 chr2:85768989 nonsynonymous SNV 0.997 5 hm6A_associated_SNPs_45558 0 0 1 2 85768979 85769001 mRNA hsa-miR-506 MAT2A miRanda miRanda
14034 chr12 3702301 3702301 1 + G T LUAD 3702303 + 3702283 3702323 41 GTAGACTTGGATTTTAAGGGACAGCTGTGTGAAACATCTGT GTAGACTTGGATTTTAAGTGACAGCTGTGTGAAACATCTGT < 41bp 1 0.640578880102449 1 0.961063146591187 experiment 0.718842239795102 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 19 PRMT8 ENSG00000111218 CDS Human protein_coding chr12:3702303 chr12:3702301 stopgain 1.000 1 hm6A_associated_SNPs_45563 0 0 0 1 3702294 3702315 mRNA hsa-miR-377 PRMT8 miRanda miRanda
14034 chr5 70837459 70837459 1 + A C LUAD 70837447 + 70837427 70837467 41 AACAAGATTGTATTGGAGGAACAAAGTTCCAGAGAAGAAAT AACAAGATTGTATTGGAGGAACAAAGTTCCAGCGAAGAAAT < 41bp 1 0.592003139171867 1 0.74404102563858 experiment 0.815993721656266 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70837447 chr5:70837459 nonsynonymous SNV 0.008 1 hm6A_associated_SNPs_45618 0 0 0 1 70837459 70837481 mRNA hsa-miR-136 BDP1 miRanda miRanda
14034 chr11 34478364 34478364 1 + G T LUAD 34478351 + 34478331 34478371 41 TGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC TGGCATTGAGGCCAGTCCTGACAAAATGCTTCATGTGAGCC < 41bp 1 0.53947601451479 1 0.0659200549125671 experiment 0.92104797097042 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 34 CAT ENSG00000121691 CDS Human protein_coding chr11:34478351 chr11:34478364 nonsynonymous SNV 0.985 5 hm6A_associated_SNPs_45634 0 0 1 2 34478353 34478364 mRNA hsa-miR-27a CAT miRanda miRanda
14034 chr11 34478364 34478364 1 + G T LUAD 34478351 + 34478331 34478371 41 TGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC TGGCATTGAGGCCAGTCCTGACAAAATGCTTCATGTGAGCC < 41bp 1 0.53947601451479 1 0.0659200549125671 experiment 0.92104797097042 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 34 CAT ENSG00000121691 CDS Human protein_coding chr11:34478351 chr11:34478364 nonsynonymous SNV 0.985 5 hm6A_associated_SNPs_45634 0 0 1 2 34478353 34478364 mRNA hsa-miR-27b CAT miRanda miRanda
14034 chr7 116199023 116199023 1 + A G LUAD 116199004 + 116198984 116199024 41 CACTTCTTCCTTTTAGATTGACTTTGAAGATGTGATTGCAG CACTTCTTCCTTTTAGATTGACTTTGAAGATGTGATTGCGG < 41bp 1 0.760133062645784 1 0.878697276115417 experiment 0.479733874708433 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 40 CAV1 ENSG00000105974 CDS Human protein_coding chr7:116199004 chr7:116199023 synonymous SNV . 0 hm6A_associated_SNPs_45636 0 0 1 1 116199006 116199027 mRNA hsa-miR-544 CAV1 miRanda miRanda
14034 chr5 40937664 40937664 1 + C A LUAD 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA AATCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.144238069312659 1 0.322901844978333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 2 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937664 nonsynonymous SNV 0.954 0 hm6A_associated_SNPs_45699 0 0 0 2 40937657 40937677 mRNA hsa-miR-193a-3p C7 miRanda miRanda
14034 chr5 40937664 40937664 1 + C A LUAD 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA AATCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.144238069312659 1 0.322901844978333 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 2 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937664 nonsynonymous SNV 0.954 0 hm6A_associated_SNPs_45699 0 0 0 2 40937656 40937677 mRNA hsa-miR-193b C7 miRanda miRanda
14034 chrX 73046712 73046712 1 - C A LUAD 73046697 - 73046677 73046717 41 TGGAAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACG TGGAATGCCTAAGAACTGAGACTTGTGACACAAGGCCAACG < 41bp 1 0.535067795886467 1 0.963377237319946 experiment 0.929864408227065 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 6 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046697 chrX:73046712 . . 0 hm6A_associated_SNPs_45718 0 0 1 2 73046707 73046727 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046712 73046712 1 - C A LUAD 73046697 - 73046677 73046717 41 TGGAAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACG TGGAATGCCTAAGAACTGAGACTTGTGACACAAGGCCAACG < 41bp 1 0.535067795886467 1 0.963377237319946 experiment 0.929864408227065 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 6 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046697 chrX:73046712 . . 0 hm6A_associated_SNPs_45718 0 0 1 2 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046712 73046712 1 - C A LUAD 73046703 - 73046683 73046723 41 GACACATGGAAGGCCTAAGAACTGAGACTTGTGACACAAGG GACACATGGAATGCCTAAGAACTGAGACTTGTGACACAAGG < 41bp 1 0.774134539104821 1 0.972079873085022 experiment 0.451730921790358 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046703 chrX:73046712 . . 0 hm6A_associated_SNPs_45719 0 0 1 2 73046707 73046727 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046712 73046712 1 - C A LUAD 73046703 - 73046683 73046723 41 GACACATGGAAGGCCTAAGAACTGAGACTTGTGACACAAGG GACACATGGAATGCCTAAGAACTGAGACTTGTGACACAAGG < 41bp 1 0.774134539104821 1 0.972079873085022 experiment 0.451730921790358 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046703 chrX:73046712 . . 0 hm6A_associated_SNPs_45719 0 0 1 2 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046712 73046712 1 - C A LUAD 73046722 - 73046702 73046742 41 GTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAAC GTCTTAAGACCTGGGACAGGACACATGGAATGCCTAAGAAC < 41bp 1 0.765614861901385 1 0.977823138237 experiment 0.46877027619723 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046722 chrX:73046712 . . 0 hm6A_associated_SNPs_45720 0 0 1 2 73046707 73046727 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046712 73046712 1 - C A LUAD 73046722 - 73046702 73046742 41 GTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAAC GTCTTAAGACCTGGGACAGGACACATGGAATGCCTAAGAAC < 41bp 1 0.765614861901385 1 0.977823138237 experiment 0.46877027619723 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046722 chrX:73046712 . . 0 hm6A_associated_SNPs_45720 0 0 1 2 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046712 73046712 1 - C A LUAD 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA TAGAAGTCTTAAGACCTGGGACAGGACACATGGAATGCCTA < 41bp 1 0.710352096287502 1 0.947110116481781 experiment 0.579295807424997 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 36 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046712 . . 0 hm6A_associated_SNPs_45721 0 0 1 2 73046707 73046727 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046712 73046712 1 - C A LUAD 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA TAGAAGTCTTAAGACCTGGGACAGGACACATGGAATGCCTA < 41bp 1 0.710352096287502 1 0.947110116481781 experiment 0.579295807424997 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 36 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046712 . . 0 hm6A_associated_SNPs_45721 0 0 1 2 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chr10 17275823 17275823 1 + G T LUAD 17275839 + 17275819 17275859 41 TGTGGATGTTTCCAAGCCTGACCTCACGGCTGCCCTGCGTG TGTGTATGTTTCCAAGCCTGACCTCACGGCTGCCCTGCGTG < 41bp 1 0.132002920241112 1 0.60297304391861 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 5 VIM ENSG00000026025 CDS Human protein_coding chr10:17275839 chr10:17275823 nonsynonymous SNV 0.960 5 hm6A_associated_SNPs_45763 0 0 1 1 17275810 17275831 mRNA hsa-miR-494 VIM miRanda miRanda
14034 chr2 160035524 160035524 1 + G T LUAD 160035533 + 160035513 160035553 41 GGGGGAGCAGGGATGGGAAGACTTTCAGCAGAGGATGGACG GGGGGAGCAGGTATGGGAAGACTTTCAGCAGAGGATGGACG < 41bp 1 0.305964237684763 1 0.984597086906433 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 TANC1 ENSG00000115183 CDS Human protein_coding chr2:160035533 chr2:160035524 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_45788 0 0 0 1 160035502 160035525 mRNA hsa-miR-339-5p TANC1 miRanda miRanda
14034 chr1 236368531 236368531 1 + C A LUAD 236368523 + 236368503 236368543 41 TGATGATGACCTTGCCTGGAACATTGCCCCTCAGGGACTTC TGATGATGACCTTGCCTGGAACATTGCCACTCAGGGACTTC < 41bp 1 0.604462497851148 1 0.801759719848633 experiment 0.791075004297705 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 29 GPR137B ENSG00000077585 CDS Human protein_coding chr1:236368523 chr1:236368531 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_45805 0 0 0 2 236368518 236368539 mRNA hsa-miR-125b GPR137B miRanda miRanda
14034 chr1 236368531 236368531 1 + C A LUAD 236368523 + 236368503 236368543 41 TGATGATGACCTTGCCTGGAACATTGCCCCTCAGGGACTTC TGATGATGACCTTGCCTGGAACATTGCCACTCAGGGACTTC < 41bp 1 0.604462497851148 1 0.801759719848633 experiment 0.791075004297705 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 29 GPR137B ENSG00000077585 CDS Human protein_coding chr1:236368523 chr1:236368531 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_45805 0 0 0 2 236368516 236368539 mRNA hsa-miR-125a-5p GPR137B miRanda miRanda
14034 chr2 71299781 71299781 1 + G T LUAD 71299794 + 71299774 71299814 41 GAGTTGTGCTCATATCTGGAACAGGCTCCAACTGCAGGCTC GAGTTGTTCTCATATCTGGAACAGGCTCCAACTGCAGGCTC < 41bp 1 0.42036758769893 1 0.0592785179615021 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 8 NAGK ENSG00000124357 CDS Human protein_coding chr2:71299794 chr2:71299781 synonymous SNV . 0 hm6A_associated_SNPs_45838 0 0 1 1 71299771 71299787 mRNA hsa-miR-425 NAGK miRanda miRanda
14034 chr16 29675507 29675507 1 + C T LUAD 29675527 + 29675507 29675547 41 CGGCAGCTAGCTCTCTGGAGACCTCCAGAGGCACCTCTGGA TGGCAGCTAGCTCTCTGGAGACCTCCAGAGGCACCTCTGGA < 41bp 1 0.307191482724338 1 0.998462915420532 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 SPN ENSG00000197471 CDS Human protein_coding chr16:29675527 chr16:29675507 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_45856 0 0 1 1 29675495 29675515 mRNA hsa-miR-22 SPN miRanda miRanda
14034 chr18 23861998 23861998 1 + C T LUAD 23861982 + 23861962 23862002 41 ACTAGGAAACTGTATGTTGAACTCAAGTCTTCACCTCAGCC ACTAGGAAACTGTATGTTGAACTCAAGTCTTCACCTTAGCC < 41bp 1 0.192782917403436 1 0.800180435180664 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23861982 chr18:23861998 stopgain 0.999 1 hm6A_associated_SNPs_45867 0 0 1 1 23861985 23862005 mRNA hsa-miR-485-5p TAF4B miRanda miRanda
14034 chr3 184082795 184082795 1 + C G LUAD 184082811 + 184082791 184082831 41 GGATCTAATCTTAGATGTAAACATTCAAATTTACCCTGTAG GGATGTAATCTTAGATGTAAACATTCAAATTTACCCTGTAG < 41bp 1 0.776766700073529 1 0.0241560041904449 experiment 0.446466599852942 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 POLR2H ENSG00000163882 CDS Human protein_coding chr3:184082811 chr3:184082795 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_45885 0 0 1 1 184082795 184082816 mRNA hsa-miR-590-3p POLR2H miRanda miRanda
14034 chr12 28702079 28702079 1 + A T LUAD 28702061 + 28702041 28702081 41 TTCCTCTCCTGTGCACAGAAACAGTTAAGTGCTTTAATAGC TTCCTCTCCTGTGCACAGAAACAGTTAAGTGCTTTAATTGC < 41bp 1 0.724275814137323 1 0.734462857246399 experiment 0.551448371725353 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28702061 chr12:28702079 synonymous SNV . 0 hm6A_associated_SNPs_45947 0 0 1 1 28702059 28702080 mRNA hsa-miR-340 CCDC91 miRanda miRanda
14034 chr12 28702079 28702079 1 + A T LUAD 28702096 + 28702076 28702116 41 AATAGCTACGGAACCAGTTGACATTGAATAAAAAGAACATG AATTGCTACGGAACCAGTTGACATTGAATAAAAAGAACATG < 41bp 1 0.746417162152342 1 0.80273026227951 experiment 0.507165675695316 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28702096 chr12:28702079 synonymous SNV . 0 hm6A_associated_SNPs_45948 0 0 1 1 28702059 28702080 mRNA hsa-miR-340 CCDC91 miRanda miRanda
14034 chr9 106889740 106889740 1 + G T LUAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACAACATCAGCAAACATAAACGGGATGCTGAAGA < 41bp 1 0.627290072024352 1 0.311117053031921 experiment 0.745419855951296 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889740 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_45956 0 0 1 3 106889735 106889756 mRNA hsa-miR-29a SMC2 miRanda miRanda
14034 chr9 106889740 106889740 1 + G T LUAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACAACATCAGCAAACATAAACGGGATGCTGAAGA < 41bp 1 0.627290072024352 1 0.311117053031921 experiment 0.745419855951296 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889740 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_45956 0 0 1 3 106889734 106889756 mRNA hsa-miR-29b SMC2 miRanda miRanda
14034 chr9 106889740 106889740 1 + G T LUAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACAACATCAGCAAACATAAACGGGATGCTGAAGA < 41bp 1 0.627290072024352 1 0.311117053031921 experiment 0.745419855951296 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889740 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_45956 0 0 1 3 106889735 106889756 mRNA hsa-miR-29c SMC2 miRanda miRanda
14034 chr1 82456512 82456512 1 + C A LUAD 82456495 + 82456475 82456515 41 AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAAATGA < 41bp 1 0.771513784067556 1 0.999287545681 experiment 0.456972431864889 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456495 chr1:82456512 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_45961 0 0 1 1 82456495 82456517 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr16 8906896 8906896 1 + A G LUAD 8906887 + 8906867 8906907 41 TGTCTTTCCTGATGGATGGGACAAGAGATACTGTCTGCGAC TGTCTTTCCTGATGGATGGGACAAGAGATGCTGTCTGCGAC < 41bp 1 0.711004318719906 1 0.911423146724701 experiment 0.577991362560188 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 PMM2 ENSG00000140650 CDS Human protein_coding chr16:8906887 chr16:8906896 nonsynonymous SNV 0.803 3 hm6A_associated_SNPs_46079 0 0 1 1 8906882 8906901 mRNA hsa-miR-144 PMM2 miRanda miRanda
14034 chr14 95081396 95081396 1 + C A LUAD 95081377 + 95081357 95081397 41 AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTAC < 41bp 1 0.21200701211149 1 0.992772221565247 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 40 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081377 chr14:95081396 synonymous SNV . 0 hm6A_associated_SNPs_46091 0 0 1 1 95081383 95081404 mRNA hsa-miR-197 SERPINA3 miRanda miRanda
14034 chr14 95081396 95081396 1 + C A LUAD 95081385 + 95081365 95081405 41 TCAAGGACCTTGACTCGCAGACAATGATGGTCCTGGTGAAT TCAAGGACCTTGACTCGCAGACAATGATGGTACTGGTGAAT < 41bp 1 0.706219208282049 1 0.987699151039124 experiment 0.587561583435902 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26593424;GSE73405;miCLIP;HepG2;Control 32 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081385 chr14:95081396 synonymous SNV . 0 hm6A_associated_SNPs_46092 0 0 1 1 95081383 95081404 mRNA hsa-miR-197 SERPINA3 miRanda miRanda
14034 chrX 73046337 73046337 1 - A T LUAD 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTATTATGCCAGGGCCAG < 41bp 1 0.458994327625579 1 0.935469448566437 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 34 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046337 . . 0 hm6A_associated_SNPs_46097 0 0 1 3 73046318 73046339 lncRNA hsa-miR-149-5p XIST miRanda starBase2
14034 chrX 73046337 73046337 1 - A T LUAD 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTATTATGCCAGGGCCAG < 41bp 1 0.458994327625579 1 0.935469448566437 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 34 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046337 . . 0 hm6A_associated_SNPs_46097 0 0 1 3 73046328 73046351 lncRNA hsa-miR-193a-3p XIST miRanda starBase2
14034 chrX 73046337 73046337 1 - A T LUAD 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTATTATGCCAGGGCCAG < 41bp 1 0.458994327625579 1 0.935469448566437 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 34 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046337 . . 0 hm6A_associated_SNPs_46097 0 0 1 3 73046328 73046351 lncRNA hsa-miR-193b-3p XIST miRanda starBase2
14034 chr10 70507003 70507003 1 + G A LUAD 70507018 + 70506998 70507038 41 GGAATGCACAGAGAATTCAAACACTACCAAATCAGGTACAG GGAATACACAGAGAATTCAAACACTACCAAATCAGGTACAG < 41bp 1 0.519839960786731 1 0.641198754310608 experiment 0.960320078426538 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507018 chr10:70507003 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_46099 0 0 1 1 70507002 70507025 mRNA hsa-miR-142-3p CCAR1 miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153506 37153528 mRNA hsa-miR-26a RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153507 37153528 mRNA hsa-miR-26b RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153501 37153523 mRNA hsa-miR-27a RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153510 37153534 mRNA hsa-miR-204 RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153510 37153534 mRNA hsa-miR-211 RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153499 37153520 mRNA hsa-miR-214 RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153507 37153526 mRNA hsa-miR-224 RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153501 37153523 mRNA hsa-miR-27b RALGAPB miRanda miRanda
14034 chr20 37153516 37153516 1 + G T LUAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTTCT < 41bp 1 0.241000300657052 1 0.00997030735015869 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 39 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153516 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_46254 0 0 1 9 37153512 37153528 mRNA hsa-miR-1297 RALGAPB miRanda miRanda
14034 chr1 75229748 75229748 1 + A T LUAD 75229734 + 75229714 75229754 41 ACTAAAGAAAGTGATGAAGAACTTGAAAATGATGATGATGA ACTAAAGAAAGTGATGAAGAACTTGAAAATGATGTTGATGA < 41bp 1 0.783757338262453 1 0.971766173839569 experiment 0.432485323475095 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229734 chr1:75229748 nonsynonymous SNV 0.146 1 hm6A_associated_SNPs_46267 0 0 1 1 75229744 75229766 mRNA hsa-miR-384 TYW3 miRanda miRanda
14034 chr6 161530849 161530849 1 + G T LUAD 161530861 + 161530841 161530881 41 TCAAGGCTGGGACTTCAGGAACATGTGATTAGGCTGTATTC TCAAGGCTTGGACTTCAGGAACATGTGATTAGGCTGTATTC < 41bp 1 0.644688013555285 1 0.887177407741547 experiment 0.71062397288943 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530861 chr6:161530849 synonymous SNV . 0 hm6A_associated_SNPs_46278 0 0 1 2 161530847 161530869 mRNA hsa-miR-27a MAP3K4 miRanda miRanda
14034 chr6 161530849 161530849 1 + G T LUAD 161530861 + 161530841 161530881 41 TCAAGGCTGGGACTTCAGGAACATGTGATTAGGCTGTATTC TCAAGGCTTGGACTTCAGGAACATGTGATTAGGCTGTATTC < 41bp 1 0.644688013555285 1 0.887177407741547 experiment 0.71062397288943 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530861 chr6:161530849 synonymous SNV . 0 hm6A_associated_SNPs_46278 0 0 1 2 161530847 161530869 mRNA hsa-miR-27b MAP3K4 miRanda miRanda
14034 chr11 251591 251591 1 + G A LUAD 251575 + 251555 251595 41 ACACGACCTGCCAATCACAGACAACTCACTTTTGAAGAAAT ACACGACCTGCCAATCACAGACAACTCACTTTTGAAAAAAT < 41bp 1 0.789579719038153 1 0.508679032325745 experiment 0.420840561923694 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 PSMD13 ENSG00000185627 CDS Human protein_coding chr11:251575 chr11:251591 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_46287 0 0 1 1 251579 251602 mRNA hsa-miR-182 PSMD13 miRanda miRanda
14034 chr1 169094246 169094246 1 + G T LUAD 169094254 + 169094234 169094274 41 AGATTCAGCCCAGAGGGATGACATGATTTTTGAAGATTGTG AGATTCAGCCCATAGGGATGACATGATTTTTGAAGATTGTG < 41bp 1 0.496636877047721 1 0.0643092095851898 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 ATP1B1 ENSG00000143153 CDS Human protein_coding chr1:169094254 chr1:169094246 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_46402 0 0 1 2 169094229 169094249 mRNA hsa-miR-330-5p ATP1B1 miRanda miRanda
14034 chr1 169094246 169094246 1 + G T LUAD 169094254 + 169094234 169094274 41 AGATTCAGCCCAGAGGGATGACATGATTTTTGAAGATTGTG AGATTCAGCCCATAGGGATGACATGATTTTTGAAGATTGTG < 41bp 1 0.496636877047721 1 0.0643092095851898 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 ATP1B1 ENSG00000143153 CDS Human protein_coding chr1:169094254 chr1:169094246 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_46402 0 0 1 2 169094230 169094249 mRNA hsa-miR-326 ATP1B1 miRanda miRanda
14034 chr9 127996228 127996228 1 + A G LUAD 127996245 + 127996225 127996265 41 TCTATGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC TCTGTGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC < 41bp 1 0.602703914875835 1 0.955663800239563 experiment 0.794592170248331 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996245 chr9:127996228 nonsynonymous SNV 0.708 3 hm6A_associated_SNPs_46404 0 0 1 4 127996212 127996232 mRNA hsa-miR-376c RABEPK miRanda miRanda
14034 chr9 127996228 127996228 1 + A G LUAD 127996245 + 127996225 127996265 41 TCTATGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC TCTGTGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC < 41bp 1 0.602703914875835 1 0.955663800239563 experiment 0.794592170248331 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996245 chr9:127996228 nonsynonymous SNV 0.708 3 hm6A_associated_SNPs_46404 0 0 1 4 127996212 127996232 mRNA hsa-miR-376a RABEPK miRanda miRanda
14034 chr9 127996228 127996228 1 + A G LUAD 127996245 + 127996225 127996265 41 TCTATGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC TCTGTGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC < 41bp 1 0.602703914875835 1 0.955663800239563 experiment 0.794592170248331 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996245 chr9:127996228 nonsynonymous SNV 0.708 3 hm6A_associated_SNPs_46404 0 0 1 4 127996210 127996232 mRNA hsa-miR-433 RABEPK miRanda miRanda
14034 chr9 127996228 127996228 1 + A G LUAD 127996245 + 127996225 127996265 41 TCTATGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC TCTGTGACGATTGTATTGTGACTGTAGTGGACTAATAAAAC < 41bp 1 0.602703914875835 1 0.955663800239563 experiment 0.794592170248331 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996245 chr9:127996228 nonsynonymous SNV 0.708 3 hm6A_associated_SNPs_46404 0 0 1 4 127996211 127996232 mRNA hsa-miR-376b RABEPK miRanda miRanda
14034 chr10 97920261 97920261 1 + C T LUAD 97920245 + 97920225 97920265 41 ACTATAAATGCTTTACTGAAACCAGTTTGTTATAACCCTCC ACTATAAATGCTTTACTGAAACCAGTTTGTTATAACTCTCC < 41bp 1 0.19198473655906 1 0.932942509651184 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 37 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920245 chr10:97920261 . 0.101 0 hm6A_associated_SNPs_46462 0 0 1 3 97920240 97920266 mRNA hsa-miR-122 ZNF518A miRanda miRanda
14034 chr10 97920261 97920261 1 + C T LUAD 97920245 + 97920225 97920265 41 ACTATAAATGCTTTACTGAAACCAGTTTGTTATAACCCTCC ACTATAAATGCTTTACTGAAACCAGTTTGTTATAACTCTCC < 41bp 1 0.19198473655906 1 0.932942509651184 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 37 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920245 chr10:97920261 . 0.101 0 hm6A_associated_SNPs_46462 0 0 1 3 97920244 97920264 mRNA hsa-miR-296-3p ZNF518A miRanda miRanda
14034 chr10 97920261 97920261 1 + C T LUAD 97920245 + 97920225 97920265 41 ACTATAAATGCTTTACTGAAACCAGTTTGTTATAACCCTCC ACTATAAATGCTTTACTGAAACCAGTTTGTTATAACTCTCC < 41bp 1 0.19198473655906 1 0.932942509651184 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 37 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920245 chr10:97920261 . 0.101 0 hm6A_associated_SNPs_46462 0 0 1 3 97920256 97920277 mRNA hsa-miR-382 ZNF518A miRanda miRanda
14034 chr10 97920261 97920261 1 + C T LUAD 97920259 + 97920239 97920279 41 ACTGAAACCAGTTTGTTATAACCCTCCTAAAACAACTTATG ACTGAAACCAGTTTGTTATAACTCTCCTAAAACAACTTATG < 41bp 1 0.460527002440444 1 0.961350560188293 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920259 chr10:97920261 . 0.101 0 hm6A_associated_SNPs_46463 0 0 1 3 97920240 97920266 mRNA hsa-miR-122 ZNF518A miRanda miRanda
14034 chr10 97920261 97920261 1 + C T LUAD 97920259 + 97920239 97920279 41 ACTGAAACCAGTTTGTTATAACCCTCCTAAAACAACTTATG ACTGAAACCAGTTTGTTATAACTCTCCTAAAACAACTTATG < 41bp 1 0.460527002440444 1 0.961350560188293 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920259 chr10:97920261 . 0.101 0 hm6A_associated_SNPs_46463 0 0 1 3 97920244 97920264 mRNA hsa-miR-296-3p ZNF518A miRanda miRanda
14034 chr10 97920261 97920261 1 + C T LUAD 97920259 + 97920239 97920279 41 ACTGAAACCAGTTTGTTATAACCCTCCTAAAACAACTTATG ACTGAAACCAGTTTGTTATAACTCTCCTAAAACAACTTATG < 41bp 1 0.460527002440444 1 0.961350560188293 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920259 chr10:97920261 . 0.101 0 hm6A_associated_SNPs_46463 0 0 1 3 97920256 97920277 mRNA hsa-miR-382 ZNF518A miRanda miRanda
14034 chrX 73046729 73046729 1 - C A LUAD 73046722 - 73046702 73046742 41 GTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAAC GTCTTAAGACCTGTGACAGGACACATGGAAGGCCTAAGAAC < 41bp 1 0.734011766723019 1 0.973269820213318 experiment 0.531976466553962 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046722 chrX:73046729 . . 0 hm6A_associated_SNPs_46482 0 0 1 1 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046729 73046729 1 - C A LUAD 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA TAGAAGTCTTAAGACCTGTGACAGGACACATGGAAGGCCTA < 41bp 1 0.57012350803814 1 0.863331079483032 experiment 0.859752983923719 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046729 . . 0 hm6A_associated_SNPs_46483 0 0 1 1 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046729 73046729 1 - C A LUAD 73046734 - 73046714 73046754 41 CTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGA CTTGAGTTAGAAGTCTTAAGACCTGTGACAGGACACATGGA < 41bp 1 0.270613777927077 1 0.859066486358643 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046734 chrX:73046729 . . 0 hm6A_associated_SNPs_46484 0 0 1 1 73046707 73046729 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chr11 107904543 107904543 1 + C T LUAD 107904553 + 107904533 107904573 41 AGGTTCTCTTCAGTTTGAAGACAAATGGGATTTTATGCGCC AGGTTCTCTTTAGTTTGAAGACAAATGGGATTTTATGCGCC < 41bp 1 0.645198963987203 1 0.526405692100525 experiment 0.709602072025594 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107904553 chr11:107904543 stopgain 0.997 1 hm6A_associated_SNPs_46509 0 0 1 2 107904541 107904563 mRNA hsa-miR-204 CUL5 miRanda miRanda
14034 chr11 107904543 107904543 1 + C T LUAD 107904553 + 107904533 107904573 41 AGGTTCTCTTCAGTTTGAAGACAAATGGGATTTTATGCGCC AGGTTCTCTTTAGTTTGAAGACAAATGGGATTTTATGCGCC < 41bp 1 0.645198963987203 1 0.526405692100525 experiment 0.709602072025594 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107904553 chr11:107904543 stopgain 0.997 1 hm6A_associated_SNPs_46509 0 0 1 2 107904541 107904563 mRNA hsa-miR-211 CUL5 miRanda miRanda
14034 chr7 98956026 98956026 1 + C T LUAD 98956022 + 98956002 98956042 41 TGTGTCATTTGTCTCAGAGAACAGCGTCGTGGCTGCTGTGA TGTGTCATTTGTCTCAGAGAACAGTGTCGTGGCTGCTGTGA < 41bp 1 0.723723200119357 1 0.21549579501152 experiment 0.552553599761286 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 25 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98956022 chr7:98956026 synonymous SNV . 0 hm6A_associated_SNPs_46544 0 0 1 3 98956022 98956026 mRNA hsa-miR-328 ARPC1A miRanda miRanda
14034 chr7 98956026 98956026 1 + C T LUAD 98956022 + 98956002 98956042 41 TGTGTCATTTGTCTCAGAGAACAGCGTCGTGGCTGCTGTGA TGTGTCATTTGTCTCAGAGAACAGTGTCGTGGCTGCTGTGA < 41bp 1 0.723723200119357 1 0.21549579501152 experiment 0.552553599761286 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 25 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98956022 chr7:98956026 synonymous SNV . 0 hm6A_associated_SNPs_46544 0 0 1 3 98956010 98956026 mRNA hsa-miR-335 ARPC1A miRanda miRanda
14034 chr7 98956026 98956026 1 + C T LUAD 98956022 + 98956002 98956042 41 TGTGTCATTTGTCTCAGAGAACAGCGTCGTGGCTGCTGTGA TGTGTCATTTGTCTCAGAGAACAGTGTCGTGGCTGCTGTGA < 41bp 1 0.723723200119357 1 0.21549579501152 experiment 0.552553599761286 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 25 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98956022 chr7:98956026 synonymous SNV . 0 hm6A_associated_SNPs_46544 0 0 1 3 98956018 98956038 mRNA hsa-miR-497 ARPC1A miRanda miRanda
14034 chr10 131964859 131964859 1 + G T LUAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACATGGACTCAAAGCCTATTCCAGTTG < 41bp 1 0.620769310235434 1 0.963309168815613 experiment 0.758461379529131 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964859 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_46567 0 0 1 5 131964845 131964868 mRNA hsa-miR-133a GLRX3 miRanda miRanda
14034 chr10 131964859 131964859 1 + G T LUAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACATGGACTCAAAGCCTATTCCAGTTG < 41bp 1 0.620769310235434 1 0.963309168815613 experiment 0.758461379529131 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964859 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_46567 0 0 1 5 131964852 131964875 mRNA hsa-miR-135a GLRX3 miRanda miRanda
14034 chr10 131964859 131964859 1 + G T LUAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACATGGACTCAAAGCCTATTCCAGTTG < 41bp 1 0.620769310235434 1 0.963309168815613 experiment 0.758461379529131 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964859 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_46567 0 0 1 5 131964852 131964875 mRNA hsa-miR-135b GLRX3 miRanda miRanda
14034 chr10 131964859 131964859 1 + G T LUAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACATGGACTCAAAGCCTATTCCAGTTG < 41bp 1 0.620769310235434 1 0.963309168815613 experiment 0.758461379529131 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964859 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_46567 0 0 1 5 131964840 131964862 mRNA hsa-miR-339-5p GLRX3 miRanda miRanda
14034 chr10 131964859 131964859 1 + G T LUAD 131964862 + 131964842 131964882 41 GATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTG GATGAAGAGGTTCGACATGGACTCAAAGCCTATTCCAGTTG < 41bp 1 0.620769310235434 1 0.963309168815613 experiment 0.758461379529131 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964862 chr10:131964859 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_46567 0 0 1 5 131964845 131964868 mRNA hsa-miR-133b GLRX3 miRanda miRanda
14034 chr15 25213180 25213180 1 + G T LUAD 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGTTTAAAGC < 41bp 1 0.305847179737304 1 0.0368172526359558 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213180 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_46568 0 0 1 2 25213167 25213191 mRNA hsa-miR-135a SNRPN miRanda miRanda
14034 chr15 25213180 25213180 1 + G T LUAD 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGTTTAAAGC < 41bp 1 0.305847179737304 1 0.0368172526359558 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213180 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_46568 0 0 1 2 25213167 25213191 mRNA hsa-miR-135b SNRPN miRanda miRanda
14034 chr12 57884035 57884035 1 + A G LUAD 57884022 + 57884002 57884042 41 CCCTGCACAGCTGGTTCCAGACACTGAGTACCCAGGAACCA CCCTGCACAGCTGGTTCCAGACACTGAGTACCCGGGAACCA < 41bp 1 0.748909328702266 1 0.552200853824615 experiment 0.502181342595468 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 MARS ENSG00000166986 CDS Human protein_coding chr12:57884022 chr12:57884035 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_46580 0 0 1 2 57884028 57884050 mRNA hsa-miR-221 MARS miRanda miRanda
14034 chr12 57884035 57884035 1 + A G LUAD 57884022 + 57884002 57884042 41 CCCTGCACAGCTGGTTCCAGACACTGAGTACCCAGGAACCA CCCTGCACAGCTGGTTCCAGACACTGAGTACCCGGGAACCA < 41bp 1 0.748909328702266 1 0.552200853824615 experiment 0.502181342595468 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 MARS ENSG00000166986 CDS Human protein_coding chr12:57884022 chr12:57884035 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_46580 0 0 1 2 57884031 57884050 mRNA hsa-miR-222 MARS miRanda miRanda
14034 chr12 57884035 57884035 1 + A G LUAD 57884039 + 57884019 57884059 41 CAGACACTGAGTACCCAGGAACCATGTCAGCGAGCTGCAGA CAGACACTGAGTACCCGGGAACCATGTCAGCGAGCTGCAGA < 41bp 1 0.376768999374622 1 0.812758326530457 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 MARS ENSG00000166986 CDS Human protein_coding chr12:57884039 chr12:57884035 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_46581 0 0 1 2 57884028 57884050 mRNA hsa-miR-221 MARS miRanda miRanda
14034 chr12 57884035 57884035 1 + A G LUAD 57884039 + 57884019 57884059 41 CAGACACTGAGTACCCAGGAACCATGTCAGCGAGCTGCAGA CAGACACTGAGTACCCGGGAACCATGTCAGCGAGCTGCAGA < 41bp 1 0.376768999374622 1 0.812758326530457 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 MARS ENSG00000166986 CDS Human protein_coding chr12:57884039 chr12:57884035 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_46581 0 0 1 2 57884031 57884050 mRNA hsa-miR-222 MARS miRanda miRanda
14034 chr3 160129708 160129708 1 + G T LUAD 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGTGTGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.655624985237097 1 0.874963998794556 experiment 0.688750029525807 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129708 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_46589 0 0 1 6 160129708 160129711 mRNA hsa-miR-10a SMC4 miRanda miRanda
14034 chr3 160129708 160129708 1 + G T LUAD 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGTGTGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.655624985237097 1 0.874963998794556 experiment 0.688750029525807 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129708 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_46589 0 0 1 6 160129708 160129711 mRNA hsa-miR-10b SMC4 miRanda miRanda
14034 chr3 160129708 160129708 1 + G T LUAD 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGTGTGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.655624985237097 1 0.874963998794556 experiment 0.688750029525807 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129708 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_46589 0 0 1 6 160129708 160129723 mRNA hsa-miR-375 SMC4 miRanda miRanda
14034 chr3 160129708 160129708 1 + G T LUAD 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGTGTGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.655624985237097 1 0.874963998794556 experiment 0.688750029525807 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129708 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_46589 0 0 1 6 160129708 160129710 mRNA hsa-miR-339-5p SMC4 miRanda miRanda
14034 chr3 160129708 160129708 1 + G T LUAD 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGTGTGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.655624985237097 1 0.874963998794556 experiment 0.688750029525807 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129708 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_46589 0 0 1 6 160129708 160129709 mRNA hsa-miR-486-5p SMC4 miRanda miRanda
14034 chr3 160129708 160129708 1 + G T LUAD 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGTGTGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.655624985237097 1 0.874963998794556 experiment 0.688750029525807 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129708 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_46589 0 0 1 6 160129708 160129712 mRNA hsa-miR-504 SMC4 miRanda miRanda
14034 chr10 22607067 22607067 1 + G A LUAD 22607060 + 22607040 22607080 41 TCTAGAAGACTGTAAATTTGACAGAGAGCGAATAGAACTGT TCTAGAAGACTGTAAATTTGACAGAGAACGAATAGAACTGT < 41bp 1 0.625034777037864 1 0.951524555683136 experiment 0.749930445924273 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 28 COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22607060 chr10:22607067 synonymous SNV . 0 hm6A_associated_SNPs_46593 0 0 1 2 22607066 22607088 mRNA hsa-miR-19a COMMD3 miRanda miRanda
14034 chr10 22607067 22607067 1 + G A LUAD 22607060 + 22607040 22607080 41 TCTAGAAGACTGTAAATTTGACAGAGAGCGAATAGAACTGT TCTAGAAGACTGTAAATTTGACAGAGAACGAATAGAACTGT < 41bp 1 0.625034777037864 1 0.951524555683136 experiment 0.749930445924273 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 28 COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22607060 chr10:22607067 synonymous SNV . 0 hm6A_associated_SNPs_46593 0 0 1 2 22607066 22607088 mRNA hsa-miR-19b COMMD3 miRanda miRanda
14034 chr5 7875450 7875450 1 + G T LUAD 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CGTCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.727715699302335 1 0.758831381797791 experiment 0.544568601395329 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875450 synonymous SNV . 0 hm6A_associated_SNPs_46605 0 0 1 4 7875444 7875468 mRNA hsa-miR-199a-5p MTRR miRanda miRanda
14034 chr5 7875450 7875450 1 + G T LUAD 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CGTCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.727715699302335 1 0.758831381797791 experiment 0.544568601395329 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875450 synonymous SNV . 0 hm6A_associated_SNPs_46605 0 0 1 4 7875445 7875468 mRNA hsa-miR-199b-5p MTRR miRanda miRanda
14034 chr5 7875450 7875450 1 + G T LUAD 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CGTCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.727715699302335 1 0.758831381797791 experiment 0.544568601395329 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875450 synonymous SNV . 0 hm6A_associated_SNPs_46605 0 0 1 4 7875442 7875462 mRNA hsa-miR-376a MTRR miRanda miRanda
14034 chr5 7875450 7875450 1 + G T LUAD 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CGTCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.727715699302335 1 0.758831381797791 experiment 0.544568601395329 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875450 synonymous SNV . 0 hm6A_associated_SNPs_46605 0 0 1 4 7875441 7875462 mRNA hsa-miR-376b MTRR miRanda miRanda
14034 chr1 82456488 82456488 1 + G T LUAD 82456491 + 82456471 82456511 41 AGAAAGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAA AGAAAGTGAAGTCCGAGTGAACTGACAGCTATGTCTCCCAA < 41bp 1 0.609139100028873 1 0.999618768692017 experiment 0.781721799942254 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456491 chr1:82456488 stopgain 0.950 1 hm6A_associated_SNPs_46629 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr1 82456488 82456488 1 + G T LUAD 82456495 + 82456475 82456515 41 AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA AGTGAAGTCCGAGTGAACTGACAGCTATGTCTCCCAACTGA < 41bp 1 0.755802564941176 1 0.99959933757782 experiment 0.488394870117647 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456495 chr1:82456488 stopgain 0.950 1 hm6A_associated_SNPs_46630 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr8 96060747 96060747 1 + A G LUAD 96060752 + 96060732 96060772 41 TGTGAGAGATGTAATATATGACATTGCCAGTCAAGCACACT TGTGAGAGATGTAATGTATGACATTGCCAGTCAAGCACACT < 41bp 1 0.766047314935909 1 0.539609789848328 experiment 0.467905370128182 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96060752 chr8:96060747 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_46671 0 0 1 1 96060733 96060755 mRNA hsa-miR-448 C8orf38 miRanda miRanda
14034 chr22 35811868 35811868 1 + C T LUAD 35811861 + 35811841 35811881 41 GCAGCAGCGCAGCTGGACTGACAGCCTCGGTGATGAGGGAC GCAGCAGCGCAGCTGGACTGACAGCCTTGGTGATGAGGGAC < 41bp 1 0.48602301749143 1 0.412167072296143 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 28 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35811861 chr22:35811868 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_46720 0 0 1 1 35811848 35811869 mRNA hsa-miR-485-5p MCM5 miRanda miRanda
14034 chr11 57381888 57381888 1 + T A LUAD 57381899 + 57381879 57381919 41 ACCAGACAGTGCTGGAACTGACAGAGACTGGGGTGGAGGCG ACCAGACAGAGCTGGAACTGACAGAGACTGGGGTGGAGGCG < 41bp 1 0.779654633734977 1 0.769505083560944 experiment 0.440690732530046 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57381899 chr11:57381888 nonsynonymous SNV 0.932 4 hm6A_associated_SNPs_46752 0 0 1 1 57381880 57381901 mRNA hsa-miR-223 SERPING1 miRanda miRanda
14034 chr16 85942710 85942710 1 + G A LUAD 85942726 + 85942706 85942746 41 GACGGACCGGTCCCAACTGGACATTTCCGAGCCATACAAAG GACGAACCGGTCCCAACTGGACATTTCCGAGCCATACAAAG < 41bp 1 0.622018539414881 1 0.981423377990723 experiment 0.755962921170239 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 5 IRF8 ENSG00000140968 CDS Human protein_coding chr16:85942726 chr16:85942710 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_46756 0 0 1 1 85942707 85942727 mRNA hsa-miR-145 IRF8 miRanda miRanda
14034 chr4 527748 527748 1 + T C LUAD 527763 + 527743 527783 41 TGCACTTCCTGAGCTCAGAAACACGCAGGTGAGGCGCCTCT TGCACCTCCTGAGCTCAGAAACACGCAGGTGAGGCGCCTCT < 41bp 1 0.37468228824264 1 0.147190898656845 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 PIGG ENSG00000174227 CDS Human protein_coding chr4:527763 chr4:527748 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_46783 0 0 1 2 527728 527750 mRNA hsa-miR-224 PIGG miRanda miRanda
14034 chr4 527748 527748 1 + T C LUAD 527763 + 527743 527783 41 TGCACTTCCTGAGCTCAGAAACACGCAGGTGAGGCGCCTCT TGCACCTCCTGAGCTCAGAAACACGCAGGTGAGGCGCCTCT < 41bp 1 0.37468228824264 1 0.147190898656845 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 PIGG ENSG00000174227 CDS Human protein_coding chr4:527763 chr4:527748 nonsynonymous SNV 0.985 0 hm6A_associated_SNPs_46783 0 0 1 2 527738 527761 mRNA hsa-miR-149 PIGG miRanda miRanda
14034 chrX 73041465 73041465 1 - C A LUAD 73041445 - 73041425 73041465 41 GTTCTGAATTGGTCTTAAGAACATTACCAGCTCCAGGTTTA TTTCTGAATTGGTCTTAAGAACATTACCAGCTCCAGGTTTA < 41bp 1 0.608209709688853 1 0.7478147149086 experiment 0.783580580622294 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 1 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041445 chrX:73041465 . . 0 hm6A_associated_SNPs_46889 0 0 1 1 73041456 73041476 lncRNA hsa-miR-892c-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046887 - 73046867 73046907 41 TTGAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGT TTTAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGT < 41bp 1 0.78189788735923 1 0.776265382766724 experiment 0.43620422528154 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046887 chrX:73046905 . . 0 hm6A_associated_SNPs_46901 0 0 1 3 73046902 73046921 lncRNA hsa-miR-371a-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046887 - 73046867 73046907 41 TTGAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGT TTTAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGT < 41bp 1 0.78189788735923 1 0.776265382766724 experiment 0.43620422528154 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046887 chrX:73046905 . . 0 hm6A_associated_SNPs_46901 0 0 1 3 73046894 73046920 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046887 - 73046867 73046907 41 TTGAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGT TTTAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGT < 41bp 1 0.78189788735923 1 0.776265382766724 experiment 0.43620422528154 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046887 chrX:73046905 . . 0 hm6A_associated_SNPs_46901 0 0 1 3 73046894 73046915 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046895 - 73046875 73046915 41 CAGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA CAGATGGTTTTAGACTTGAGACCCGAGGACTAAGATGGAAA < 41bp 1 0.525009199305928 1 0.678418040275574 experiment 0.949981601388144 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046895 chrX:73046905 . . 0 hm6A_associated_SNPs_46902 0 0 1 3 73046902 73046921 lncRNA hsa-miR-371a-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046895 - 73046875 73046915 41 CAGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA CAGATGGTTTTAGACTTGAGACCCGAGGACTAAGATGGAAA < 41bp 1 0.525009199305928 1 0.678418040275574 experiment 0.949981601388144 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046895 chrX:73046905 . . 0 hm6A_associated_SNPs_46902 0 0 1 3 73046894 73046920 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046895 - 73046875 73046915 41 CAGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAA CAGATGGTTTTAGACTTGAGACCCGAGGACTAAGATGGAAA < 41bp 1 0.525009199305928 1 0.678418040275574 experiment 0.949981601388144 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046895 chrX:73046905 . . 0 hm6A_associated_SNPs_46902 0 0 1 3 73046894 73046915 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046902 - 73046882 73046922 41 TATAAGACAGATGGTTTGAGACTTGAGACCCGAGGACTAAG TATAAGACAGATGGTTTTAGACTTGAGACCCGAGGACTAAG < 41bp 1 0.724166167057438 1 0.752576649188995 experiment 0.551667665885125 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046902 chrX:73046905 . . 0 hm6A_associated_SNPs_46903 0 0 1 3 73046902 73046921 lncRNA hsa-miR-371a-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046902 - 73046882 73046922 41 TATAAGACAGATGGTTTGAGACTTGAGACCCGAGGACTAAG TATAAGACAGATGGTTTTAGACTTGAGACCCGAGGACTAAG < 41bp 1 0.724166167057438 1 0.752576649188995 experiment 0.551667665885125 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046902 chrX:73046905 . . 0 hm6A_associated_SNPs_46903 0 0 1 3 73046894 73046920 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046902 - 73046882 73046922 41 TATAAGACAGATGGTTTGAGACTTGAGACCCGAGGACTAAG TATAAGACAGATGGTTTTAGACTTGAGACCCGAGGACTAAG < 41bp 1 0.724166167057438 1 0.752576649188995 experiment 0.551667665885125 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046902 chrX:73046905 . . 0 hm6A_associated_SNPs_46903 0 0 1 3 73046894 73046915 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046916 - 73046896 73046936 41 TAGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAG TAGAAGGCCCAAAGTATAAGACAGATGGTTTTAGACTTGAG < 41bp 1 0.751489742101854 1 0.49656742811203 experiment 0.497020515796292 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046916 chrX:73046905 . . 0 hm6A_associated_SNPs_46904 0 0 1 3 73046902 73046921 lncRNA hsa-miR-371a-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046916 - 73046896 73046936 41 TAGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAG TAGAAGGCCCAAAGTATAAGACAGATGGTTTTAGACTTGAG < 41bp 1 0.751489742101854 1 0.49656742811203 experiment 0.497020515796292 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046916 chrX:73046905 . . 0 hm6A_associated_SNPs_46904 0 0 1 3 73046894 73046920 lncRNA hsa-miR-513c-5p XIST miRanda starBase2
14034 chrX 73046905 73046905 1 - C A LUAD 73046916 - 73046896 73046936 41 TAGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAG TAGAAGGCCCAAAGTATAAGACAGATGGTTTTAGACTTGAG < 41bp 1 0.751489742101854 1 0.49656742811203 experiment 0.497020515796292 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 32 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046916 chrX:73046905 . . 0 hm6A_associated_SNPs_46904 0 0 1 3 73046894 73046915 lncRNA hsa-miR-514b-5p XIST miRanda starBase2
14034 chr1 97278637 97278637 1 + A T LUAD 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTCGCTAACACTGGGGGCTCTGTGAAAG < 41bp 1 0.646180178504023 1 0.95764172077179 experiment 0.707639642991955 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278637 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_46916 0 0 1 3 97278623 97278644 mRNA hsa-miR-27a PTBP2 miRanda miRanda
14034 chr1 97278637 97278637 1 + A T LUAD 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTCGCTAACACTGGGGGCTCTGTGAAAG < 41bp 1 0.646180178504023 1 0.95764172077179 experiment 0.707639642991955 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278637 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_46916 0 0 1 3 97278623 97278644 mRNA hsa-miR-27b PTBP2 miRanda miRanda
14034 chr1 97278637 97278637 1 + A T LUAD 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTCGCTAACACTGGGGGCTCTGTGAAAG < 41bp 1 0.646180178504023 1 0.95764172077179 experiment 0.707639642991955 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278637 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_46916 0 0 1 3 97278622 97278643 mRNA hsa-miR-128 PTBP2 miRanda miRanda
14034 chrX 70627911 70627911 1 + C A LUAD 70627905 + 70627885 70627925 41 CTCGGCCAATGGACCTACAAACACTCCGCGAAAACGTGCGT CTCGGCCAATGGACCTACAAACACTCAGCGAAAACGTGCGT < 41bp 1 0.504826069647352 1 0.771397948265076 experiment 0.990347860705296 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 TAF1 ENSG00000147133 CDS Human protein_coding chrX:70627905 chrX:70627911 nonsynonymous SNV 0.955 4 hm6A_associated_SNPs_46946 0 0 1 1 70627891 70627912 mRNA hsa-miR-122 DYT3 miRanda miRanda
14034 chr13 103514782 103514782 1 + G T LUAD 103514764 + 103514744 103514784 41 AGCAGAAGAAATGCGTATAAACAGCTCCACCGAGAACAGTG AGCAGAAGAAATGCGTATAAACAGCTCCACCGAGAACATTG < 41bp 1 0.795624254482717 1 0.999256610870361 experiment 0.408751491034567 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514764 chr13:103514782 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_46977 0 0 1 1 103514773 103514792 mRNA hsa-miR-205 ERCC5 miRanda miRanda
14034 chr19 49518853 49518853 1 + A G LUAD 49518851 + 49518831 49518871 41 TACAGAAGTGCAGGTGGATGACATCAAGCGGGTCTACTCAC TACAGAAGTGCAGGTGGATGACGTCAAGCGGGTCTACTCAC Direct Loss 1 0.183435848231869 1 0.961670994758606 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 23 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49518851 chr19:49518853 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_47003 0 0 1 1 49518848 49518869 mRNA hsa-miR-411 RUVBL2 miRanda miRanda
14034 chr5 40937675 40937675 1 + G T LUAD 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA ACTCACTGGCCATTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.14023491221441 1 0.668142437934875 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 13 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937675 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_47004 0 0 0 2 40937657 40937677 mRNA hsa-miR-193a-3p C7 miRanda miRanda
14034 chr5 40937675 40937675 1 + G T LUAD 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA ACTCACTGGCCATTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.14023491221441 1 0.668142437934875 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 13 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937675 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_47004 0 0 0 2 40937656 40937677 mRNA hsa-miR-193b C7 miRanda miRanda
14034 chr11 75718610 75718610 1 + C T LUAD 75718609 + 75718589 75718629 41 TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTA TGAAGACTAATGCTCAGTTGATAATTCGTTGCAGGCAGTTA Direct Loss 1 0.474060379085063 1 0.00290343165397644 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718609 chr11:75718610 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_47041 0 0 1 1 75718590 75718611 mRNA hsa-miR-505 UVRAG miRanda miRanda
14034 chr10 116930952 116930952 1 + A G LUAD 116930941 + 116930921 116930961 41 CAGCAGTATGCTGTGGAGGGACATTCAGCACATATTATGGA CAGCAGTATGCTGTGGAGGGACATTCAGCACGTATTATGGA < 41bp 1 0.393684882763205 1 0.91810405254364 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 ATRNL1 ENSG00000107518 CDS Human protein_coding chr10:116930941 chr10:116930952 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_47054 0 0 1 1 116930933 116930954 mRNA hsa-miR-455-5p ATRNL1 miRanda miRanda
14034 chr10 97920367 97920367 1 + G A LUAD 97920373 + 97920353 97920393 41 ACTCAAAAAGACAAGCAAAAACAATTACCAGATTGTGAAGA ACTCAAAAAGACAAACAAAAACAATTACCAGATTGTGAAGA < 41bp 1 0.693575800324983 1 0.96798849105835 experiment 0.612848399350033 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 15 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920373 chr10:97920367 . 1.000 1 hm6A_associated_SNPs_47082 0 0 1 1 97920353 97920374 mRNA hsa-miR-129-5p ZNF518A miRanda miRanda
14034 chr22 41305156 41305156 1 + G C LUAD 41305157 + 41305137 41305177 41 ATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTG ATGCCGGGCTCGTGGCGCACACATTTTAGCCTATCCACCTG Direct Loss 1 0.37675184779551 1 0.000883668661117554 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 20 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41305157 chr22:41305156 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_47088 0 0 0 1 41305136 41305159 mRNA hsa-miR-346 XPNPEP3 miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292035 33292053 mRNA hsa-let-7a S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292029 33292053 mRNA hsa-let-7b S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292035 33292053 mRNA hsa-let-7c S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292035 33292053 mRNA hsa-let-7d S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292030 33292053 mRNA hsa-let-7e S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292035 33292053 mRNA hsa-let-7f S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292029 33292053 mRNA hsa-miR-98 S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292031 33292052 mRNA hsa-miR-196a S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292035 33292053 mRNA hsa-let-7g S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292032 33292053 mRNA hsa-let-7i S100PBP miRanda miRanda
14034 chr1 33292039 33292039 1 + C G LUAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCCTGACCTGTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.75003372362046 1 0.9829922914505 experiment 0.49993255275908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292039 synonymous SNV . 0 hm6A_associated_SNPs_47107 0 0 1 11 33292031 33292052 mRNA hsa-miR-196b S100PBP miRanda miRanda
14034 chr10 116930951 116930951 1 + C T LUAD 116930941 + 116930921 116930961 41 CAGCAGTATGCTGTGGAGGGACATTCAGCACATATTATGGA CAGCAGTATGCTGTGGAGGGACATTCAGCATATATTATGGA < 41bp 1 0.391395593497353 1 0.903648197650909 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 ATRNL1 ENSG00000107518 CDS Human protein_coding chr10:116930941 chr10:116930951 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_47160 0 0 1 1 116930933 116930954 mRNA hsa-miR-455-5p ATRNL1 miRanda miRanda
14034 chr15 48063639 48063639 1 + G T LUAD 48063640 + 48063620 48063660 41 CCAATGACTTCTCTGGAAAGACAAAGAGGTTATCACAAAAA CCAATGACTTCTCTGGAAATACAAAGAGGTTATCACAAAAA Direct Loss 1 0.799307522210807 1 0.98743724822998 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 SEMA6D ENSG00000137872 CDS Human protein_coding chr15:48063640 chr15:48063639 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_47179 0 0 0 1 48063629 48063653 mRNA hsa-miR-875-5p SEMA6D miRanda miRanda
14034 chr7 17382562 17382562 1 + A G LUAD 17382569 + 17382549 17382589 41 AGAATGGAGTTTTAAATGAAACATATCCAGCTGAATTAAAT AGAATGGAGTTTTGAATGAAACATATCCAGCTGAATTAAAT < 41bp 1 0.746763431954249 1 0.833242177963257 experiment 0.506473136091502 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 14 AHR ENSG00000106546 CDS Human protein_coding chr7:17382569 chr7:17382562 synonymous SNV . 0 hm6A_associated_SNPs_47184 0 0 0 2 17382555 17382576 mRNA hsa-miR-190 AHR miRanda miRanda
14034 chr7 17382562 17382562 1 + A G LUAD 17382569 + 17382549 17382589 41 AGAATGGAGTTTTAAATGAAACATATCCAGCTGAATTAAAT AGAATGGAGTTTTGAATGAAACATATCCAGCTGAATTAAAT < 41bp 1 0.746763431954249 1 0.833242177963257 experiment 0.506473136091502 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 14 AHR ENSG00000106546 CDS Human protein_coding chr7:17382569 chr7:17382562 synonymous SNV . 0 hm6A_associated_SNPs_47184 0 0 0 2 17382557 17382576 mRNA hsa-miR-190b AHR miRanda miRanda
14034 chr18 33751061 33751061 1 + G C LUAD 33751068 + 33751048 33751088 41 GCTTATATACCTGGAAAAAGACTGATCAAGTTCCAGAAATA GCTTATATACCTGCAAAAAGACTGATCAAGTTCCAGAAATA < 41bp 1 0.610415614367718 1 0.97967928647995 experiment 0.779168771264563 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ELP2 ENSG00000134759 CDS Human protein_coding chr18:33751068 chr18:33751061 nonsynonymous SNV 0.963 4 hm6A_associated_SNPs_47200 0 0 1 1 33751061 33751084 mRNA hsa-miR-378 ELP2 miRanda miRanda
14034 chr12 104705135 104705135 1 + A G LUAD 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCAAGTCCTGTGACTATGACCTTATCATCATTG < 41bp 1 0.444332744997389 1 0.839845240116119 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705135 nonsynonymous SNV 0.964 4 hm6A_associated_SNPs_47204 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705135 104705135 1 + A G LUAD 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCAAGTCCTGTGACTATGACCTTATCATCATTG < 41bp 1 0.444332744997389 1 0.839845240116119 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705135 nonsynonymous SNV 0.964 4 hm6A_associated_SNPs_47204 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr12 104705135 104705135 1 + A G LUAD 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCAAGTCCTGTGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.264613814413281 1 0.712930202484131 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705135 nonsynonymous SNV 0.964 4 hm6A_associated_SNPs_47205 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705135 104705135 1 + A G LUAD 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCAAGTCCTGTGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.264613814413281 1 0.712930202484131 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705135 nonsynonymous SNV 0.964 4 hm6A_associated_SNPs_47205 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr1 150318555 150318555 1 + T C LUAD 150318561 + 150318541 150318581 41 ATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCAC ATGCTGGGCAACTGCACCTGACAGGGGTGGTGGTACTGCAC < 41bp 1 0.796006875306712 1 0.795579791069031 experiment 0.407986249386575 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150318561 chr1:150318555 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_47248 0 0 1 1 150318543 150318567 mRNA hsa-miR-339-5p PRPF3 miRanda miRanda
14034 chr9 132863452 132863452 1 + A T LUAD 132863468 + 132863448 132863488 41 GCACATCCTTTCTGATAAAGACAAAAAGATCTTCATGATTG GCACTTCCTTTCTGATAAAGACAAAAAGATCTTCATGATTG < 41bp 1 0.699506042570346 1 0.0158317685127258 experiment 0.600987914859308 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 GPR107 ENSG00000148358 CDS Human protein_coding chr9:132863468 chr9:132863452 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_47252 0 0 1 2 132863433 132863453 mRNA hsa-miR-218 GPR107 miRanda miRanda
14034 chr9 132863452 132863452 1 + A T LUAD 132863468 + 132863448 132863488 41 GCACATCCTTTCTGATAAAGACAAAAAGATCTTCATGATTG GCACTTCCTTTCTGATAAAGACAAAAAGATCTTCATGATTG < 41bp 1 0.699506042570346 1 0.0158317685127258 experiment 0.600987914859308 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 GPR107 ENSG00000148358 CDS Human protein_coding chr9:132863468 chr9:132863452 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_47252 0 0 1 2 132863444 132863465 mRNA hsa-miR-361-5p GPR107 miRanda miRanda
14034 chr19 7626097 7626097 1 + A G LUAD 7626114 + 7626094 7626134 41 GAGAGGAGTCAGATTGTCTGACAGAGTATGAGGAGGACGCC GAGGGGAGTCAGATTGTCTGACAGAGTATGAGGAGGACGCC < 41bp 1 0.517127709523021 1 0.223019003868103 experiment 0.965744580953959 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7626114 chr19:7626097 nonsynonymous SNV 0.935 1 hm6A_associated_SNPs_47267 0 0 1 1 7626096 7626116 mRNA hsa-miR-505 PNPLA6 miRanda miRanda
14034 chr15 25332861 25332861 1 + G T LUAD 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCTTGGAAAGCTGAACAAAATGATTGAAAACTCTA < 41bp 1 0.271252890928714 1 0.540767073631287 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332861 . . 0 hm6A_associated_SNPs_47274 0 0 1 2 25332860 25332879 mRNA hsa-miR-144 SNORD116-21 miRanda miRanda
14034 chr15 25332861 25332861 1 + G T LUAD 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCTTGGAAAGCTGAACAAAATGATTGAAAACTCTA < 41bp 1 0.271252890928714 1 0.540767073631287 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332861 . . 0 hm6A_associated_SNPs_47274 0 0 1 2 25332860 25332879 lncRNA hsa-miR-144-3p AC124312.3 miRanda starBase2
14034 chr10 93711298 93711298 1 + C T LUAD 93711313 + 93711293 93711333 41 AACTTCAGCATCCTTTGTTAACAAACAACCTGTAGGTAAAA AACTTTAGCATCCTTTGTTAACAAACAACCTGTAGGTAAAA < 41bp 1 0.490598016237641 1 0.881215810775757 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93711313 chr10:93711298 nonsynonymous SNV 0.963 1 hm6A_associated_SNPs_47275 0 0 1 1 93711290 93711312 mRNA hsa-miR-495 BTAF1 miRanda miRanda
14034 chr10 93711298 93711298 1 + C T LUAD 93711317 + 93711297 93711337 41 TCAGCATCCTTTGTTAACAAACAACCTGTAGGTAAAACGTT TTAGCATCCTTTGTTAACAAACAACCTGTAGGTAAAACGTT < 41bp 1 0.486262008779902 1 0.854759812355042 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93711317 chr10:93711298 nonsynonymous SNV 0.963 1 hm6A_associated_SNPs_47276 0 0 1 1 93711290 93711312 mRNA hsa-miR-495 BTAF1 miRanda miRanda
14034 chr5 40937673 40937673 1 + C A LUAD 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA ACTCACTGGCAAGTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.131824057680792 1 0.515308916568756 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937673 nonsynonymous SNV 0.990 0 hm6A_associated_SNPs_47303 0 0 0 2 40937657 40937677 mRNA hsa-miR-193a-3p C7 miRanda miRanda
14034 chr5 40937673 40937673 1 + C A LUAD 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA ACTCACTGGCAAGTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.131824057680792 1 0.515308916568756 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937673 nonsynonymous SNV 0.990 0 hm6A_associated_SNPs_47303 0 0 0 2 40937656 40937677 mRNA hsa-miR-193b C7 miRanda miRanda
14034 chr22 22658345 22658345 1 + G T LUAD 22658325 + 22658305 22658345 41 AAGAATGAAGATGTAGAGAAACAAGGAAGAAATTGACCCTG AAGAATGAAGATGTAGAGAAACAAGGAAGAAATTGACCCTT < 41bp 1 0.157107178256333 1 0.893257319927216 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 BMS1P20 ENSG00000236850;ENSG00000272779 ncRNA_exonic Human other chr22:22658325 chr22:22658345 . . 0 hm6A_associated_SNPs_47309 0 0 1 2 22658345 22658365 mRNA hsa-miR-96 LOC96610 miRanda miRanda
14034 chr22 22658345 22658345 1 + G T LUAD 22658325 + 22658305 22658345 41 AAGAATGAAGATGTAGAGAAACAAGGAAGAAATTGACCCTG AAGAATGAAGATGTAGAGAAACAAGGAAGAAATTGACCCTT < 41bp 1 0.157107178256333 1 0.893257319927216 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 BMS1P20 ENSG00000236850;ENSG00000272779 ncRNA_exonic Human other chr22:22658325 chr22:22658345 . . 0 hm6A_associated_SNPs_47309 0 0 1 2 22658344 22658365 mRNA hsa-miR-1271 LOC96610 miRanda miRanda
14034 chr20 57561906 57561906 1 + C G LUAD 57561915 + 57561895 57561935 41 TGGCCGAGTGGCTCATTCAGACAGGTGCTTTGTGGGTGTCC TGGCCGAGTGGGTCATTCAGACAGGTGCTTTGTGGGTGTCC < 41bp 1 0.475158041897873 1 0.0262317657470703 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57561915 chr20:57561906 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_47315 0 0 1 2 57561904 57561918 mRNA hsa-miR-141 TH1L miRanda miRanda
14034 chr20 57561906 57561906 1 + C G LUAD 57561915 + 57561895 57561935 41 TGGCCGAGTGGCTCATTCAGACAGGTGCTTTGTGGGTGTCC TGGCCGAGTGGGTCATTCAGACAGGTGCTTTGTGGGTGTCC < 41bp 1 0.475158041897873 1 0.0262317657470703 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57561915 chr20:57561906 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_47315 0 0 1 2 57561904 57561918 mRNA hsa-miR-200a TH1L miRanda miRanda
14034 chr5 162869132 162869132 1 + C T LUAD 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAGAATGTTTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.663211887835405 1 0.307799398899078 experiment 0.673576224329191 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869132 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_47323 0 0 1 5 162869110 162869132 mRNA hsa-miR-181b CCNG1 miRanda miRanda
14034 chr5 162869132 162869132 1 + C T LUAD 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAGAATGTTTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.663211887835405 1 0.307799398899078 experiment 0.673576224329191 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869132 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_47323 0 0 1 5 162869126 162869147 mRNA hsa-miR-1 CCNG1 miRanda miRanda
14034 chr5 162869132 162869132 1 + C T LUAD 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAGAATGTTTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.663211887835405 1 0.307799398899078 experiment 0.673576224329191 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869132 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_47323 0 0 1 5 162869121 162869147 mRNA hsa-miR-206 CCNG1 miRanda miRanda
14034 chr5 162869132 162869132 1 + C T LUAD 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAGAATGTTTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.663211887835405 1 0.307799398899078 experiment 0.673576224329191 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869132 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_47323 0 0 1 5 162869110 162869132 mRNA hsa-miR-181d CCNG1 miRanda miRanda
14034 chr5 162869132 162869132 1 + C T LUAD 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAGAATGTTTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.663211887835405 1 0.307799398899078 experiment 0.673576224329191 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869132 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_47323 0 0 1 5 162869128 162869147 mRNA hsa-miR-613 CCNG1 miRanda miRanda
14034 chr1 211486135 211486135 1 + G A LUAD 211486118 + 211486098 211486138 41 CAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAGAAC CAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAAAAC < 41bp 1 0.450511052945622 1 0.975358843803406 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 38 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486118 chr1:211486135 synonymous SNV . 0 hm6A_associated_SNPs_47344 0 0 1 1 211486123 211486145 mRNA hsa-miR-186 RCOR3 miRanda miRanda
14034 chr1 211486135 211486135 1 + G A LUAD 211486149 + 211486129 211486169 41 AGTGAAGAACTTCTTTGTAAACTACAGGCGTCGGTTTAACT AGTGAAAAACTTCTTTGTAAACTACAGGCGTCGGTTTAACT < 41bp 1 0.275828374646204 1 0.884788513183594 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 7 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486149 chr1:211486135 synonymous SNV . 0 hm6A_associated_SNPs_47345 0 0 1 1 211486123 211486145 mRNA hsa-miR-186 RCOR3 miRanda miRanda
14034 chr11 65267826 65267826 1 + T C LUAD 65267809 + 65267789 65267829 41 ACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTT ACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTACTTT < 41bp 1 0.11704328402051 1 0.995408594608307 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 38 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267809 chr11:65267826 . . 0 hm6A_associated_SNPs_47361 0 0 1 1 65267823 65267851 lncRNA hsa-miR-3146 MALAT1 miRanda starBase2
14034 chr11 65267826 65267826 1 + T C LUAD 65267843 + 65267823 65267863 41 TTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTG TTACTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTG < 41bp 1 0.162600505513083 1 0.964838624000549 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 4 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267843 chr11:65267826 . . 0 hm6A_associated_SNPs_47362 0 0 1 1 65267823 65267851 lncRNA hsa-miR-3146 MALAT1 miRanda starBase2
14034 chr16 24231390 24231390 1 + G T LUAD 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTT < 41bp 1 0.524645675571527 1 0.964983880519867 experiment 0.950708648856947 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231390 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_47372 0 0 1 3 24231375 24231397 mRNA hsa-miR-16 PRKCB miRanda miRanda
14034 chr16 24231390 24231390 1 + G T LUAD 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTT < 41bp 1 0.524645675571527 1 0.964983880519867 experiment 0.950708648856947 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231390 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_47372 0 0 1 3 24231371 24231397 mRNA hsa-miR-15b PRKCB miRanda miRanda
14034 chr16 24231390 24231390 1 + G T LUAD 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTT < 41bp 1 0.524645675571527 1 0.964983880519867 experiment 0.950708648856947 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231390 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_47372 0 0 1 3 24231375 24231397 mRNA hsa-miR-424 PRKCB miRanda miRanda
14034 chr17 39846406 39846406 1 + G A LUAD 39846407 + 39846387 39846427 41 AGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATGCC AGTAATTCAGCTACAGGGTAACCAACGCAAGAACATATGCC < 41bp 1 0.36607506316008 1 0.920739769935608 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846407 chr17:39846406 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_47377 0 0 1 2 39846386 39846406 mRNA hsa-miR-10a EIF1 miRanda miRanda
14034 chr17 39846406 39846406 1 + G A LUAD 39846407 + 39846387 39846427 41 AGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATGCC AGTAATTCAGCTACAGGGTAACCAACGCAAGAACATATGCC < 41bp 1 0.36607506316008 1 0.920739769935608 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846407 chr17:39846406 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_47377 0 0 1 2 39846386 39846406 mRNA hsa-miR-10b EIF1 miRanda miRanda
14034 chr16 85840373 85840373 1 + A G LUAD 85840371 + 85840351 85840391 41 CCCCCTCCCGCAAAGCTTTGACAAAGAGTGGGTGGCCAAGC CCCCCTCCCGCAAAGCTTTGACGAAGAGTGGGTGGCCAAGC Direct Loss 1 0.620884513175276 1 0.88714337348938 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 23 COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85840371 chr16:85840373 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_47380 0 0 1 1 85840370 85840390 mRNA hsa-miR-96 COX4I1 miRanda miRanda
14034 chr2 73450603 73450603 1 + C T LUAD 73450583 + 73450563 73450603 41 CCAGTGGGTCCATGCCTGTGACACTCTGGAGTTGAAGCCTC CCAGTGGGTCCATGCCTGTGACACTCTGGAGTTGAAGCCTT < 41bp 1 0.513709252327496 1 0.308244347572327 experiment 0.972581495345008 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73450583 chr2:73450603 stopgain 1.000 1 hm6A_associated_SNPs_47452 0 0 1 3 73450598 73450621 mRNA hsa-miR-302d SMYD5 miRanda miRanda
14034 chr2 73450603 73450603 1 + C T LUAD 73450583 + 73450563 73450603 41 CCAGTGGGTCCATGCCTGTGACACTCTGGAGTTGAAGCCTC CCAGTGGGTCCATGCCTGTGACACTCTGGAGTTGAAGCCTT < 41bp 1 0.513709252327496 1 0.308244347572327 experiment 0.972581495345008 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73450583 chr2:73450603 stopgain 1.000 1 hm6A_associated_SNPs_47452 0 0 1 3 73450597 73450621 mRNA hsa-miR-373 SMYD5 miRanda miRanda
14034 chr2 73450603 73450603 1 + C T LUAD 73450583 + 73450563 73450603 41 CCAGTGGGTCCATGCCTGTGACACTCTGGAGTTGAAGCCTC CCAGTGGGTCCATGCCTGTGACACTCTGGAGTTGAAGCCTT < 41bp 1 0.513709252327496 1 0.308244347572327 experiment 0.972581495345008 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73450583 chr2:73450603 stopgain 1.000 1 hm6A_associated_SNPs_47452 0 0 1 3 73450599 73450621 mRNA hsa-miR-520e SMYD5 miRanda miRanda
14034 chr4 74283994 74283994 1 + C A LUAD 74284011 + 74283991 74284031 41 ACACTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG ACAATTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG < 41bp 1 0.345316135606612 1 0.781852602958679 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74284011 chr4:74283994 nonsynonymous SNV 0.982 2 hm6A_associated_SNPs_47472 0 0 1 2 74283973 74283997 mRNA hsa-miR-18a ALB miRanda miRanda
14034 chr4 74283994 74283994 1 + C A LUAD 74284011 + 74283991 74284031 41 ACACTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG ACAATTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG < 41bp 1 0.345316135606612 1 0.781852602958679 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74284011 chr4:74283994 nonsynonymous SNV 0.982 2 hm6A_associated_SNPs_47472 0 0 1 2 74283973 74283997 mRNA hsa-miR-18b ALB miRanda miRanda
14034 chr3 56647649 56647649 1 + C T LUAD 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCGTAGGAAGAAACAACTGGAGGAAGAGCAAAG < 41bp 1 0.604898089485318 1 0.577076494693756 experiment 0.790203821029363 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647649 synonymous SNV . 0 hm6A_associated_SNPs_47487 0 0 1 2 56647646 56647666 mRNA hsa-miR-199b-5p CCDC66 miRanda miRanda
14034 chr3 56647649 56647649 1 + C T LUAD 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCGTAGGAAGAAACAACTGGAGGAAGAGCAAAG < 41bp 1 0.604898089485318 1 0.577076494693756 experiment 0.790203821029363 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647649 synonymous SNV . 0 hm6A_associated_SNPs_47487 0 0 1 2 56647644 56647667 mRNA hsa-miR-145 CCDC66 miRanda miRanda
14034 chr17 18167985 18167985 1 + C T LUAD 18167990 + 18167970 18168010 41 CCACTTCAACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTG CCACTTCAACCCCAGTGTGAACCTCTTCAGCAGCTTGCGTG < 41bp 1 0.644960586698877 1 0.985249519348145 experiment 0.710078826602246 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 16 MIEF2 ENSG00000177427 CDS Human protein_coding chr17:18167990 chr17:18167985 synonymous SNV . 0 hm6A_associated_SNPs_47510 0 0 1 1 18167982 18168006 mRNA hsa-miR-372 SMCR7 miRanda miRanda
14034 chr17 39846405 39846405 1 + T C LUAD 39846407 + 39846387 39846427 41 AGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATGCC AGTAATTCAGCTACAGGGCGACCAACGCAAGAACATATGCC Direct Loss 1 0.431995185418268 1 0.957746267318726 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846407 chr17:39846405 synonymous SNV . 0 hm6A_associated_SNPs_47519 0 0 1 2 39846386 39846406 mRNA hsa-miR-10a EIF1 miRanda miRanda
14034 chr17 39846405 39846405 1 + T C LUAD 39846407 + 39846387 39846427 41 AGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATGCC AGTAATTCAGCTACAGGGCGACCAACGCAAGAACATATGCC Direct Loss 1 0.431995185418268 1 0.957746267318726 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846407 chr17:39846405 synonymous SNV . 0 hm6A_associated_SNPs_47519 0 0 1 2 39846386 39846406 mRNA hsa-miR-10b EIF1 miRanda miRanda
14034 chr11 62532865 62532865 1 + G A LUAD 62532866 + 62532846 62532886 41 CCAACCCACCATGTTACAAGACAATGGATGAGGTGAGTGGA CCAACCCACCATGTTACAAAACAATGGATGAGGTGAGTGGA < 41bp 1 0.764971775921681 1 0.115730911493301 experiment 0.470056448156638 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 POLR2G ENSG00000168002 CDS Human protein_coding chr11:62532866 chr11:62532865 synonymous SNV . 0 hm6A_associated_SNPs_47522 0 0 1 1 62532848 62532868 mRNA hsa-miR-431 POLR2G miRanda miRanda
14034 chr5 61923142 61923142 1 + C T LUAD 61923155 + 61923135 61923175 41 AAGGATTCTAAGAGCACATGACATGTGGCTGCCTCCCCTTT AAGGATTTTAAGAGCACATGACATGTGGCTGCCTCCCCTTT < 41bp 1 0.763484065589167 1 0.959779798984528 experiment 0.473031868821665 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 8 IPO11 ENSG00000086200 CDS Human protein_coding chr5:61923155 chr5:61923142 synonymous SNV . 0 hm6A_associated_SNPs_47533 0 0 1 2 61923137 61923161 mRNA hsa-miR-181b IPO11 miRanda miRanda
14034 chr5 61923142 61923142 1 + C T LUAD 61923155 + 61923135 61923175 41 AAGGATTCTAAGAGCACATGACATGTGGCTGCCTCCCCTTT AAGGATTTTAAGAGCACATGACATGTGGCTGCCTCCCCTTT < 41bp 1 0.763484065589167 1 0.959779798984528 experiment 0.473031868821665 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 8 IPO11 ENSG00000086200 CDS Human protein_coding chr5:61923155 chr5:61923142 synonymous SNV . 0 hm6A_associated_SNPs_47533 0 0 1 2 61923137 61923161 mRNA hsa-miR-181d IPO11 miRanda miRanda
14034 chr1 82456564 82456564 1 + A T LUAD 82456555 + 82456535 82456575 41 CCTACAGTCCCCCAACAGAGACTCTCTTTATACAAGCATGC CCTACAGTCCCCCAACAGAGACTCTCTTTTTACAAGCATGC < 41bp 1 0.637554034251465 1 0.999642014503479 experiment 0.72489193149707 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456555 chr1:82456564 nonsynonymous SNV 0.338 4 hm6A_associated_SNPs_47547 0 0 1 1 82456549 82456567 mRNA hsa-miR-340 LPHN2 miRanda miRanda
14034 chr3 179334811 179334811 1 + A G LUAD 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCGGAACACTGGGAATATTATAAGGT < 41bp 1 0.69527497418086 1 0.31514585018158 experiment 0.609450051638279 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334811 synonymous SNV . 0 hm6A_associated_SNPs_47572 0 0 1 4 179334795 179334821 mRNA hsa-miR-199a-5p NDUFB5 miRanda miRanda
14034 chr3 179334811 179334811 1 + A G LUAD 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCGGAACACTGGGAATATTATAAGGT < 41bp 1 0.69527497418086 1 0.31514585018158 experiment 0.609450051638279 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334811 synonymous SNV . 0 hm6A_associated_SNPs_47572 0 0 1 4 179334796 179334821 mRNA hsa-miR-199b-5p NDUFB5 miRanda miRanda
14034 chr3 179334811 179334811 1 + A G LUAD 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCGGAACACTGGGAATATTATAAGGT < 41bp 1 0.69527497418086 1 0.31514585018158 experiment 0.609450051638279 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334811 synonymous SNV . 0 hm6A_associated_SNPs_47572 0 0 1 4 179334810 179334831 mRNA hsa-miR-374a NDUFB5 miRanda miRanda
14034 chr3 179334811 179334811 1 + A G LUAD 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGCTATGTCCCGGAACACTGGGAATATTATAAGGT < 41bp 1 0.69527497418086 1 0.31514585018158 experiment 0.609450051638279 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334811 synonymous SNV . 0 hm6A_associated_SNPs_47572 0 0 1 4 179334810 179334831 mRNA hsa-miR-374b NDUFB5 miRanda miRanda
14034 chr8 68107683 68107683 1 + C G LUAD 68107680 + 68107660 68107700 41 CATAGGGGATGACGGATCAAACTCTGTAGCAACTGAGCCCT CATAGGGGATGACGGATCAAACTGTGTAGCAACTGAGCCCT < 41bp 1 0.668907043499344 1 0.919775366783142 experiment 0.662185913001312 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68107680 chr8:68107683 nonsynonymous SNV 0.884 4 hm6A_associated_SNPs_47598 0 0 1 1 68107677 68107699 mRNA hsa-miR-24 CSPP1 miRanda miRanda
14034 chr2 155306993 155306993 1 + C G LUAD 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCGTACAATGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.775423336860987 1 0.998275637626648 experiment 0.449153326278025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306993 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_47609 0 0 0 3 155306982 155307003 mRNA hsa-miR-33a GALNT13 miRanda miRanda
14034 chr2 155306993 155306993 1 + C G LUAD 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCGTACAATGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.775423336860987 1 0.998275637626648 experiment 0.449153326278025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306993 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_47609 0 0 0 3 155306991 155307012 mRNA hsa-miR-139-5p GALNT13 miRanda miRanda
14034 chr2 155306993 155306993 1 + C G LUAD 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCGTACAATGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.775423336860987 1 0.998275637626648 experiment 0.449153326278025 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306993 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_47609 0 0 0 3 155306983 155307003 mRNA hsa-miR-33b GALNT13 miRanda miRanda
14034 chr11 65272326 65272326 1 + A C LUAD 65272335 + 65272315 65272355 41 CGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCC CGAAGGGCCAGCGAAGCCAGACCCAGTAAGAAAAAATAGCC < 41bp 1 0.0178770488804806 1 0.646386742591858 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272335 chr11:65272326 . . 0 hm6A_associated_SNPs_47612 0 0 1 1 65272309 65272331 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr13 49841839 49841839 1 + A C LUAD 49841827 + 49841807 49841847 41 GGAGACCTCTTACAAATGTGACTTTATTCAAAAAATTACAA GGAGACCTCTTACAAATGTGACTTTATTCAAACAATTACAA < 41bp 1 0.680152276807433 1 0.976539492607117 experiment 0.639695446385135 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 CDADC1 ENSG00000102543 CDS Human protein_coding chr13:49841827 chr13:49841839 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_47638 0 0 1 3 49841821 49841841 mRNA hsa-miR-129-5p CDADC1 miRanda miRanda
14034 chr13 49841839 49841839 1 + A C LUAD 49841827 + 49841807 49841847 41 GGAGACCTCTTACAAATGTGACTTTATTCAAAAAATTACAA GGAGACCTCTTACAAATGTGACTTTATTCAAACAATTACAA < 41bp 1 0.680152276807433 1 0.976539492607117 experiment 0.639695446385135 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 CDADC1 ENSG00000102543 CDS Human protein_coding chr13:49841827 chr13:49841839 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_47638 0 0 1 3 49841831 49841851 mRNA hsa-miR-129-5p CDADC1 miRanda miRanda
14034 chr13 49841839 49841839 1 + A C LUAD 49841827 + 49841807 49841847 41 GGAGACCTCTTACAAATGTGACTTTATTCAAAAAATTACAA GGAGACCTCTTACAAATGTGACTTTATTCAAACAATTACAA < 41bp 1 0.680152276807433 1 0.976539492607117 experiment 0.639695446385135 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 CDADC1 ENSG00000102543 CDS Human protein_coding chr13:49841827 chr13:49841839 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_47638 0 0 1 3 49841824 49841844 mRNA hsa-miR-590-3p CDADC1 miRanda miRanda
14034 chr6 142491483 142491483 1 + A T LUAD 142491485 + 142491465 142491505 41 CTCTCTTTTCTCTTCCAGAAACATGATCAAGTCCTTCTATA CTCTCTTTTCTCTTCCAGTAACATGATCAAGTCCTTCTATA < 41bp 1 0.612866051895568 1 0.0364879071712494 experiment 0.774267896208864 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142491485 chr6:142491483 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_47678 0 0 1 1 142491483 142491483 mRNA hsa-miR-758 VTA1 miRanda miRanda
14034 chr1 145116003 145116003 1 + A G LUAD 145115991 + 145115971 145116011 41 TGTATTAGAATCCAAGTGGAACTTCTGCCTCTAAAGACCTT TGTATTAGAATCCAAGTGGAACTTCTGCCTCTGAAGACCTT < 41bp 1 0.338901215030835 1 0.853052616119385 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 33 SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115991 chr1:145116003 . . 0 hm6A_associated_SNPs_47681 0 0 1 1 145116001 145116019 mRNA hsa-miR-431 SEC22B miRanda miRanda
14034 chr1 145116003 145116003 1 + A G LUAD 145116007 + 145115987 145116027 41 TGGAACTTCTGCCTCTAAAGACCTTGCAAGAAAAGAGATGT TGGAACTTCTGCCTCTGAAGACCTTGCAAGAAAAGAGATGT < 41bp 1 0.351395959773057 1 0.723460614681244 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145116007 chr1:145116003 . . 0 hm6A_associated_SNPs_47682 0 0 1 1 145116001 145116019 mRNA hsa-miR-431 SEC22B miRanda miRanda
14034 chr11 126142964 126142964 1 + G T LUAD 126142967 + 126142947 126142987 41 TTCAGCCAGCTTTCTACGGAACATCAATGTAGGTGCAATGA TTCAGCCAGCTTTCTACTGAACATCAATGTAGGTGCAATGA < 41bp 1 0.494523063698458 1 0.0134900212287903 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 18 FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126142967 chr11:126142964 nonsynonymous SNV 0.975 5 hm6A_associated_SNPs_47747 0 0 1 1 126142947 126142968 mRNA hsa-miR-384 FOXRED1 miRanda miRanda
14034 chr6 42611955 42611955 1 + G C LUAD 42611952 + 42611932 42611972 41 ACATTAAAAAAAAAAAAAAGACAGGTGTCTCCATGATGGAT ACATTAAAAAAAAAAAAAAGACACGTGTCTCCATGATGGAT < 41bp 1 0.559765036498745 1 0.35853385925293 experiment 0.880469927002511 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 24 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42611952 chr6:42611955 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_47756 0 0 1 1 42611952 42611955 mRNA hsa-miR-653 UBR2 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACCGACAGACAGCTCAGAGCAGTAATGTG < 41bp 1 0.501355960596633 1 0.747777342796326 experiment 0.997288078806734 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142700 . . 0 hm6A_associated_SNPs_47762 0 0 1 4 21142697 21142717 mRNA hsa-miR-23a PLK1S1 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACCGACAGACAGCTCAGAGCAGTAATGTG < 41bp 1 0.501355960596633 1 0.747777342796326 experiment 0.997288078806734 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142700 . . 0 hm6A_associated_SNPs_47762 0 0 1 4 21142697 21142717 mRNA hsa-miR-23b PLK1S1 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACCGACAGACAGCTCAGAGCAGTAATGTG < 41bp 1 0.501355960596633 1 0.747777342796326 experiment 0.997288078806734 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142700 . . 0 hm6A_associated_SNPs_47762 0 0 1 4 21142686 21142706 mRNA hsa-miR-330-5p PLK1S1 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142695 + 21142675 21142715 41 ACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG ACCCACATTCACACCGACAGACAGCTCAGAGCAGTAATGTG < 41bp 1 0.501355960596633 1 0.747777342796326 experiment 0.997288078806734 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142695 chr20:21142700 . . 0 hm6A_associated_SNPs_47762 0 0 1 4 21142687 21142706 mRNA hsa-miR-326 PLK1S1 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142720 + 21142700 21142740 41 CCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA TCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA < 41bp 1 0.472532742784716 1 0.871734619140625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142720 chr20:21142700 . . 0 hm6A_associated_SNPs_47763 0 0 1 4 21142697 21142717 mRNA hsa-miR-23a PLK1S1 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142720 + 21142700 21142740 41 CCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA TCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA < 41bp 1 0.472532742784716 1 0.871734619140625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142720 chr20:21142700 . . 0 hm6A_associated_SNPs_47763 0 0 1 4 21142697 21142717 mRNA hsa-miR-23b PLK1S1 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142720 + 21142700 21142740 41 CCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA TCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA < 41bp 1 0.472532742784716 1 0.871734619140625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142720 chr20:21142700 . . 0 hm6A_associated_SNPs_47763 0 0 1 4 21142686 21142706 mRNA hsa-miR-330-5p PLK1S1 miRanda miRanda
14034 chr20 21142700 21142700 1 + C T LUAD 21142720 + 21142700 21142740 41 CCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA TCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAAACTA < 41bp 1 0.472532742784716 1 0.871734619140625 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142720 chr20:21142700 . . 0 hm6A_associated_SNPs_47763 0 0 1 4 21142687 21142706 mRNA hsa-miR-326 PLK1S1 miRanda miRanda
14034 chr1 82456636 82456636 1 + C A LUAD 82456627 + 82456607 82456647 41 CAGCCCTGACATGGAAGAAGACCTCTCTCCCTCCAGGAGGA CAGCCCTGACATGGAAGAAGACCTCTCTCACTCCAGGAGGA < 41bp 1 0.296104144650578 1 0.997461557388306 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 30 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456627 chr1:82456636 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_47781 0 0 1 1 82456616 82456637 mRNA hsa-miR-185 LPHN2 miRanda miRanda
14034 chr11 65268419 65268419 1 + C T LUAD 65268438 + 65268418 65268458 41 TCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAAT TTTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAAT < 41bp 1 0.124490890848796 1 0.943290948867798 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268438 chr11:65268419 . . 0 hm6A_associated_SNPs_47830 0 0 1 1 65268418 65268440 lncRNA hsa-miR-346 MALAT1 miRanda starBase2
14034 chr11 65273045 65273045 1 + C G LUAD 65273062 + 65273042 65273082 41 TGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA TGCGTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA < 41bp 1 0.28570811211901 1 0.870991110801697 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273062 chr11:65273045 . . 0 hm6A_associated_SNPs_47886 0 0 1 3 65273029 65273048 lncRNA hsa-miR-124-3p MALAT1 miRanda starBase2
14034 chr11 65273045 65273045 1 + C G LUAD 65273062 + 65273042 65273082 41 TGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA TGCGTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA < 41bp 1 0.28570811211901 1 0.870991110801697 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273062 chr11:65273045 . . 0 hm6A_associated_SNPs_47886 0 0 1 3 65273028 65273048 lncRNA hsa-miR-506-3p MALAT1 miRanda starBase2
14034 chr11 65273045 65273045 1 + C G LUAD 65273062 + 65273042 65273082 41 TGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA TGCGTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGA < 41bp 1 0.28570811211901 1 0.870991110801697 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273062 chr11:65273045 . . 0 hm6A_associated_SNPs_47886 0 0 1 3 65273025 65273047 lncRNA hsa-miR-3622a-5p MALAT1 miRanda starBase2
14034 chr8 27634593 27634593 1 + G A LUAD 27634585 + 27634565 27634605 41 AGACTGTCAGTGAAAAAAAAACTTTTGCGACAAGGCAAGTG AGACTGTCAGTGAAAAAAAAACTTTTGCAACAAGGCAAGTG < 41bp 1 0.540899495584609 1 0.988331317901611 experiment 0.918201008830783 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634585 chr8:27634593 synonymous SNV . 0 hm6A_associated_SNPs_47932 0 0 0 2 27634590 27634610 mRNA hsa-miR-96 ESCO2 miRanda miRanda
14034 chr8 27634593 27634593 1 + G A LUAD 27634585 + 27634565 27634605 41 AGACTGTCAGTGAAAAAAAAACTTTTGCGACAAGGCAAGTG AGACTGTCAGTGAAAAAAAAACTTTTGCAACAAGGCAAGTG < 41bp 1 0.540899495584609 1 0.988331317901611 experiment 0.918201008830783 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634585 chr8:27634593 synonymous SNV . 0 hm6A_associated_SNPs_47932 0 0 0 2 27634590 27634610 mRNA hsa-miR-1271 ESCO2 miRanda miRanda
14034 chr21 33036154 33036154 1 + G T LUAD 33036144 + 33036124 33036164 41 GTGTGGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGG GTGTGGGGAAGCATTAAAGGACTGACTGAATGCCTGCATGG < 41bp 1 0.761146636927747 1 0.873836815357208 experiment 0.477706726144507 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 31 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33036144 chr21:33036154 nonsynonymous SNV 0.872 5 hm6A_associated_SNPs_47946 0 0 1 1 33036140 33036164 mRNA hsa-miR-214 SOD1 miRanda miRanda
14034 chr21 33036154 33036154 1 + G T LUAD 33036148 + 33036128 33036168 41 GGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTC GGGGAAGCATTAAAGGACTGACTGAATGCCTGCATGGATTC < 41bp 1 0.587591296799835 1 0.3643539249897 experiment 0.824817406400331 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33036148 chr21:33036154 nonsynonymous SNV 0.872 5 hm6A_associated_SNPs_47947 0 0 1 1 33036140 33036164 mRNA hsa-miR-214 SOD1 miRanda miRanda
14034 chr11 65271299 65271299 1 + A G LUAD 65271280 + 65271260 65271300 41 GTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAA GTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAGA < 41bp 1 0.150071549421498 1 0.0567502081394196 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271280 chr11:65271299 . . 0 hm6A_associated_SNPs_47953 0 0 1 1 65271298 65271320 lncRNA hsa-miR-126-5p MALAT1 miRanda starBase2
14034 chr17 42745405 42745405 1 + T A LUAD 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTAACTTTCTTATGATGACTTAAGCCATTTGTACCCTT < 41bp 1 0.502303233908362 1 0.0219024121761322 experiment 0.995393532183276 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745405 stopgain 0.997 0 hm6A_associated_SNPs_47978 0 0 0 2 42745404 42745424 mRNA hsa-miR-224 C17orf104 miRanda miRanda
14034 chr17 42745405 42745405 1 + T A LUAD 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTAACTTTCTTATGATGACTTAAGCCATTTGTACCCTT < 41bp 1 0.502303233908362 1 0.0219024121761322 experiment 0.995393532183276 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745405 stopgain 0.997 0 hm6A_associated_SNPs_47978 0 0 0 2 42745396 42745418 mRNA hsa-miR-376b C17orf104 miRanda miRanda
14034 chrX 73046540 73046540 1 - G T LUAD 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGACCATGACCCAGAACCCAGGAAGGATAGAAGCTT < 41bp 1 0.213477525108735 1 0.949957132339478 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 8 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046540 . . 0 hm6A_associated_SNPs_48023 0 0 1 1 73046519 73046540 lncRNA hsa-miR-1343-3p XIST miRanda starBase2
14034 chr8 27634552 27634552 1 + G T LUAD 27634567 + 27634547 27634587 41 TTGAAGATTCTGATGTAGAGACTGTCAGTGAAAAAAAAACT TTGAATATTCTGATGTAGAGACTGTCAGTGAAAAAAAAACT < 41bp 1 0.702318280597633 1 0.986928701400757 experiment 0.595363438804734 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634567 chr8:27634552 nonsynonymous SNV 0.291 3 hm6A_associated_SNPs_48028 0 0 1 1 27634535 27634556 mRNA hsa-miR-216a ESCO2 miRanda miRanda
14034 chr5 56542933 56542933 1 + A G LUAD 56542923 + 56542903 56542943 41 CTACACAATGGAAAAGCCAAACAAAAGAAAATAAAGTTGGA CTACACAATGGAAAAGCCAAACAAAAGAAAGTAAAGTTGGA < 41bp 1 0.686555828993215 1 0.0654078423976898 experiment 0.626888342013571 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56542923 chr5:56542933 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_48051 0 0 1 1 56542930 56542952 mRNA hsa-miR-186 GPBP1 miRanda miRanda
14034 chr14 61518616 61518616 1 + G T LUAD 61518623 + 61518603 61518643 41 ACTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTG ACTTGCAATATATTTTCCTGACATTAGAAATGTATTTGGTG < 41bp 1 0.557654597374417 1 0.0108133256435394 experiment 0.884690805251166 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 SLC38A6 ENSG00000139974 CDS Human protein_coding chr14:61518623 chr14:61518616 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_48057 0 0 0 1 61518603 61518623 mRNA hsa-miR-873 SLC38A6 miRanda miRanda
14034 chr11 36680708 36680708 1 + G T LUAD 36680714 + 36680694 36680734 41 GAGAAAGGACACCAGCCCAGACTTAGAGAAATCCTGTGACT GAGAAAGGACACCATCCCAGACTTAGAGAAATCCTGTGACT < 41bp 1 0.321042462042146 1 0.665794551372528 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680714 chr11:36680708 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_48067 0 0 1 2 36680688 36680710 mRNA hsa-miR-138 C11orf74 miRanda miRanda
14034 chr11 36680708 36680708 1 + G T LUAD 36680714 + 36680694 36680734 41 GAGAAAGGACACCAGCCCAGACTTAGAGAAATCCTGTGACT GAGAAAGGACACCATCCCAGACTTAGAGAAATCCTGTGACT < 41bp 1 0.321042462042146 1 0.665794551372528 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680714 chr11:36680708 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_48067 0 0 1 2 36680707 36680728 mRNA hsa-miR-876-5p C11orf74 miRanda miRanda
14034 chr20 25405910 25405910 1 + G T LUAD 25405920 + 25405900 25405940 41 GGGAGGAGATGAAGGTTTGGACATTACACAGGATATGAAAC GGGAGGAGATTAAGGTTTGGACATTACACAGGATATGAAAC < 41bp 1 0.753858758833748 1 0.808903574943542 experiment 0.492282482332503 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 GINS1 ENSG00000101003 CDS Human protein_coding chr20:25405920 chr20:25405910 stopgain 0.953 1 hm6A_associated_SNPs_48098 0 0 1 1 25405894 25405915 mRNA hsa-miR-205 GINS1 miRanda miRanda
14034 chr21 30699100 30699100 1 + G T LUAD 30699092 + 30699072 30699112 41 CCCCCACAATTCTTCCATAGACCCTCATGGACTTTATTCTT CCCCCACAATTCTTCCATAGACCCTCATTGACTTTATTCTT < 41bp 1 0.548229827490588 1 0.966109097003937 experiment 0.903540345018825 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 29 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699092 chr21:30699100 stopgain 0.935 1 hm6A_associated_SNPs_48122 0 0 1 1 30699091 30699114 mRNA hsa-miR-186 BACH1 miRanda miRanda
14034 chrX 53114989 53114989 1 + T G LUAD 53114998 + 53114978 53115018 41 GATAACTGACATCAATGAGAACATCTGCGACAGCGAGAATC GATAACTGACAGCAATGAGAACATCTGCGACAGCGAGAATC < 41bp 1 0.792118831963734 1 0.999968111515045 experiment 0.415762336072531 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 12 TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53114998 chrX:53114989 nonsynonymous SNV 0.026 1 hm6A_associated_SNPs_48146 0 0 1 1 53114972 53114993 mRNA hsa-miR-599 TSPYL2 miRanda miRanda
14034 chr7 99956677 99956677 1 + G T LUAD 99956681 + 99956661 99956701 41 AGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAG AGTTGCAGTCCATCAATGGGACCAAACTCACCATCACCCAG < 41bp 1 0.274320465938682 1 0.773892104625702 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PILRB ENSG00000121716 CDS Human protein_coding chr7:99956681 chr7:99956677 nonsynonymous SNV 0.009 0 hm6A_associated_SNPs_48157 0 0 1 2 99956665 99956686 mRNA hsa-miR-133a PILRB miRanda miRanda
14034 chr7 99956677 99956677 1 + G T LUAD 99956681 + 99956661 99956701 41 AGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAG AGTTGCAGTCCATCAATGGGACCAAACTCACCATCACCCAG < 41bp 1 0.274320465938682 1 0.773892104625702 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PILRB ENSG00000121716 CDS Human protein_coding chr7:99956681 chr7:99956677 nonsynonymous SNV 0.009 0 hm6A_associated_SNPs_48157 0 0 1 2 99956665 99956686 mRNA hsa-miR-133b PILRB miRanda miRanda
14034 chr12 95694210 95694210 1 + C T LUAD 95694206 + 95694186 95694226 41 CAATGTGAGAGTGAAGATGAACCACAAGCAGATGGAAGTGG CAATGTGAGAGTGAAGATGAACCATAAGCAGATGGAAGTGG < 41bp 1 0.736289516023164 1 0.98048460483551 experiment 0.527420967953672 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 25 VEZT ENSG00000028203 CDS Human protein_coding chr12:95694206 chr12:95694210 stopgain 0.002 0 hm6A_associated_SNPs_48191 0 0 1 1 95694189 95694214 mRNA hsa-miR-9 VEZT miRanda miRanda
14034 chr19 4944410 4944410 1 + A G LUAD 4944414 + 4944394 4944434 41 GTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGT GTCCCGTCCAACCACTGCGGACCCATCCCGGGGATCCCCGT < 41bp 1 0.126695803472304 1 0.933945536613464 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944414 chr19:4944410 . 0.989 3 hm6A_associated_SNPs_48202 0 0 1 2 4944389 4944410 mRNA hsa-miR-140-5p UHRF1 miRanda miRanda
14034 chr19 4944410 4944410 1 + A G LUAD 4944414 + 4944394 4944434 41 GTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGT GTCCCGTCCAACCACTGCGGACCCATCCCGGGGATCCCCGT < 41bp 1 0.126695803472304 1 0.933945536613464 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944414 chr19:4944410 . 0.989 3 hm6A_associated_SNPs_48202 0 0 1 2 4944389 4944410 mRNA hsa-miR-296-3p UHRF1 miRanda miRanda
14034 chr3 101311480 101311480 1 + A G LUAD 101311497 + 101311477 101311517 41 ACCAACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGC ACCGACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGC < 41bp 1 0.634487848904344 1 0.587742626667023 experiment 0.731024302191312 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 PCNP ENSG00000081154 CDS Human protein_coding chr3:101311497 chr3:101311480 nonsynonymous SNV . 0 hm6A_associated_SNPs_48208 0 0 1 2 101311476 101311497 mRNA hsa-miR-133a PCNP miRanda miRanda
14034 chr3 101311480 101311480 1 + A G LUAD 101311497 + 101311477 101311517 41 ACCAACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGC ACCGACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGC < 41bp 1 0.634487848904344 1 0.587742626667023 experiment 0.731024302191312 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 PCNP ENSG00000081154 CDS Human protein_coding chr3:101311497 chr3:101311480 nonsynonymous SNV . 0 hm6A_associated_SNPs_48208 0 0 1 2 101311476 101311497 mRNA hsa-miR-133b PCNP miRanda miRanda
14034 chr10 12209788 12209788 1 + G A LUAD 12209771 + 12209751 12209791 41 GTGCTAGAGCGTAGGAATAGACCCTGGCGTCCACTGTGAGA GTGCTAGAGCGTAGGAATAGACCCTGGCGTCCACTGTAAGA < 41bp 1 0.426412253952019 1 0.090139240026474 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NUDT5 ENSG00000165609 CDS Human protein_coding chr10:12209771 chr10:12209788 synonymous SNV . 0 hm6A_associated_SNPs_48210 0 0 0 3 12209767 12209789 mRNA hsa-miR-128 SEC61A2 miRanda miRanda
14034 chr10 12209788 12209788 1 + G A LUAD 12209771 + 12209751 12209791 41 GTGCTAGAGCGTAGGAATAGACCCTGGCGTCCACTGTGAGA GTGCTAGAGCGTAGGAATAGACCCTGGCGTCCACTGTAAGA < 41bp 1 0.426412253952019 1 0.090139240026474 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NUDT5 ENSG00000165609 CDS Human protein_coding chr10:12209771 chr10:12209788 synonymous SNV . 0 hm6A_associated_SNPs_48210 0 0 0 3 12209772 12209795 mRNA hsa-miR-181d SEC61A2 miRanda miRanda
14034 chr10 12209788 12209788 1 + G A LUAD 12209771 + 12209751 12209791 41 GTGCTAGAGCGTAGGAATAGACCCTGGCGTCCACTGTGAGA GTGCTAGAGCGTAGGAATAGACCCTGGCGTCCACTGTAAGA < 41bp 1 0.426412253952019 1 0.090139240026474 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 NUDT5 ENSG00000165609 CDS Human protein_coding chr10:12209771 chr10:12209788 synonymous SNV . 0 hm6A_associated_SNPs_48210 0 0 0 3 12209774 12209796 mRNA hsa-miR-543 SEC61A2 miRanda miRanda
14034 chrX 73042079 73042079 1 - G T LUAD 73042084 - 73042064 73042104 41 TTGCTCCTTAAGTTACAGGAACTCTCCTTATAATAGACACT TTGCTCCTTAAGTTACAGGAACTCTACTTATAATAGACACT < 41bp 1 0.401168931558044 1 0.912118554115295 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042084 chrX:73042079 . . 0 hm6A_associated_SNPs_48219 0 0 1 1 73042075 73042100 lncRNA hsa-miR-4428 XIST miRanda starBase2
14034 chr5 35876456 35876456 1 + C G LUAD 35876436 + 35876416 35876456 41 ACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTGCCC ACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTGCCG < 41bp 1 0.790127505042304 1 0.774010717868805 experiment 0.419744989915393 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 41 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876436 chr5:35876456 synonymous SNV . 0 hm6A_associated_SNPs_48221 0 0 1 1 35876451 35876473 mRNA hsa-miR-185 IL7R miRanda miRanda
14034 chr17 55184111 55184111 1 + C T LUAD 55184125 + 55184105 55184145 41 AGGGCTCACCACCACCAAAGACCTACGTGAGCTGCCTGAAG AGGGCTTACCACCACCAAAGACCTACGTGAGCTGCCTGAAG < 41bp 1 0.782881626119925 1 0.995036482810974 experiment 0.43423674776015 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55184125 chr17:55184111 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_48225 0 0 1 1 55184101 55184125 mRNA hsa-miR-9 AKAP1 miRanda miRanda
14034 chr5 86685216 86685216 1 + C A LUAD 86685229 + 86685209 86685249 41 GAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAA GAATGTAACTGAACTTCCGGACACTACAGAGCATTCTAGAA < 41bp 1 0.720953091899304 1 0.890367388725281 experiment 0.558093816201392 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 RASA1 ENSG00000145715 CDS Human protein_coding chr5:86685229 chr5:86685216 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_48226 0 0 1 1 86685214 86685236 mRNA hsa-miR-142-3p RASA1 miRanda miRanda
14034 chr2 277071 277071 1 + G C LUAD 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAAAAACAACTTATTATTCAAGATCC < 41bp 1 0.745455016565697 1 0.71545797586441 experiment 0.509089966868605 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277071 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_48258 0 0 0 2 277050 277071 mRNA hsa-miR-374a ACP1 miRanda miRanda
14034 chr2 277071 277071 1 + G C LUAD 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAAAAACAACTTATTATTCAAGATCC < 41bp 1 0.745455016565697 1 0.71545797586441 experiment 0.509089966868605 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277071 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_48258 0 0 0 2 277050 277071 mRNA hsa-miR-374b ACP1 miRanda miRanda
14034 chr2 28521252 28521252 1 + C T LUAD 28521232 + 28521212 28521252 41 GCCTCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATTTC GCCTCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATTTT < 41bp 1 0.0755950870563769 1 0.134522080421448 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521232 chr2:28521252 stopgain 0.999 1 hm6A_associated_SNPs_48288 0 0 1 2 28521233 28521254 mRNA hsa-miR-203 BRE miRanda miRanda
14034 chr2 28521252 28521252 1 + C T LUAD 28521232 + 28521212 28521252 41 GCCTCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATTTC GCCTCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATTTT < 41bp 1 0.0755950870563769 1 0.134522080421448 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521232 chr2:28521252 stopgain 0.999 1 hm6A_associated_SNPs_48288 0 0 1 2 28521239 28521261 mRNA hsa-miR-191 BRE miRanda miRanda
14034 chr4 74280832 74280832 1 + C A LUAD 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCTGCTGAGACTTGCCAAGACATATGAAACCAATCTAGAG < 41bp 1 0.430286758609719 1 0.0793609023094177 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 34 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280832 nonsynonymous SNV 0.689 2 hm6A_associated_SNPs_48395 0 0 1 1 74280816 74280834 mRNA hsa-miR-140-5p ALB miRanda miRanda
14034 chr4 74280832 74280832 1 + C A LUAD 74280828 + 74280808 74280848 41 GACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGT GACTTGCCAAGACATATGAAACCAATCTAGAGAAGTGCTGT < 41bp 1 0.081831973379819 1 0.0224251449108124 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 25 ALB ENSG00000163631 CDS Human protein_coding chr4:74280828 chr4:74280832 nonsynonymous SNV 0.689 2 hm6A_associated_SNPs_48396 0 0 1 1 74280816 74280834 mRNA hsa-miR-140-5p ALB miRanda miRanda
14034 chr7 17379180 17379180 1 + A T LUAD 17379161 + 17379141 17379181 41 TGATTTTTCTGGTGAGGTTGACTTCAGAGACATTGACTTAA TGATTTTTCTGGTGAGGTTGACTTCAGAGACATTGACTTTA < 41bp 1 0.799029582361148 1 0.995882511138916 experiment 0.401940835277703 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 AHR ENSG00000106546 CDS Human protein_coding chr7:17379161 chr7:17379180 nonsynonymous SNV 0.992 1 hm6A_associated_SNPs_48431 0 0 1 1 17379171 17379194 mRNA hsa-miR-876-5p AHR miRanda miRanda
14034 chr4 76442022 76442022 1 + G A LUAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAACAATGAAAAGACTTGATGTGAATGCAGCCGG < 41bp 1 0.452099553695802 1 0.621117830276489 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 10 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442022 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_48455 0 0 1 3 76442018 76442039 mRNA hsa-miR-26a THAP6 miRanda miRanda
14034 chr4 76442022 76442022 1 + G A LUAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAACAATGAAAAGACTTGATGTGAATGCAGCCGG < 41bp 1 0.452099553695802 1 0.621117830276489 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 10 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442022 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_48455 0 0 1 3 76442019 76442039 mRNA hsa-miR-26b THAP6 miRanda miRanda
14034 chr4 76442022 76442022 1 + G A LUAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAACAATGAAAAGACTTGATGTGAATGCAGCCGG < 41bp 1 0.452099553695802 1 0.621117830276489 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 10 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442022 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_48455 0 0 1 3 76442010 76442028 mRNA hsa-miR-137 THAP6 miRanda miRanda
14034 chr11 58384721 58384721 1 + A G LUAD 58384740 + 58384720 58384760 41 CATGAAGAAACATGATGCAGACTCCTTCTACCAGTTTTCTT CGTGAAGAAACATGATGCAGACTCCTTCTACCAGTTTTCTT < 41bp 1 0.78144551661568 1 0.87868344783783 experiment 0.43710896676864 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58384740 chr11:58384721 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48462 0 0 1 1 58384700 58384723 mRNA hsa-miR-455-5p ZFP91-CNTF miRanda miRanda
14034 chr22 38168672 38168672 1 + G T LUAD 38168668 + 38168648 38168688 41 TGGAGCTGAGCCACATCAAGACACGGTCTGAGCGGGAGATC TGGAGCTGAGCCACATCAAGACACTGTCTGAGCGGGAGATC < 41bp 1 0.591621154022224 1 0.986072659492493 experiment 0.816757691955551 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38168668 chr22:38168672 nonsynonymous SNV 0.546 3 hm6A_associated_SNPs_48472 0 0 1 1 38168649 38168673 mRNA hsa-miR-187 TRIOBP miRanda miRanda
14034 chr4 115544374 115544374 1 + A T LUAD 115544380 + 115544360 115544400 41 TCACTATACTAAGAACTGTGACCTGATGGTTGGCAACCATG TCACTATACTAAGATCTGTGACCTGATGGTTGGCAACCATG < 41bp 1 0.364017252827677 1 0.984364926815033 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 15 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544380 chr4:115544374 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_48553 0 0 1 2 115544362 115544381 mRNA hsa-miR-27a UGT8 miRanda miRanda
14034 chr4 115544374 115544374 1 + A T LUAD 115544380 + 115544360 115544400 41 TCACTATACTAAGAACTGTGACCTGATGGTTGGCAACCATG TCACTATACTAAGATCTGTGACCTGATGGTTGGCAACCATG < 41bp 1 0.364017252827677 1 0.984364926815033 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 15 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544380 chr4:115544374 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_48553 0 0 1 2 115544362 115544381 mRNA hsa-miR-27b UGT8 miRanda miRanda
14034 chr15 25213175 25213175 1 + A T LUAD 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACACCAAGTGGTGGTTAAAGC < 41bp 1 0.282518955785923 1 0.0574580729007721 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213175 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_48574 0 0 0 2 25213167 25213191 mRNA hsa-miR-135a SNRPN miRanda miRanda
14034 chr15 25213175 25213175 1 + A T LUAD 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACACCAAGTGGTGGTTAAAGC < 41bp 1 0.282518955785923 1 0.0574580729007721 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213175 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_48574 0 0 0 2 25213167 25213191 mRNA hsa-miR-135b SNRPN miRanda miRanda
14034 chr1 235590528 235590528 1 + C G LUAD 235590531 + 235590511 235590551 41 CACATTGCTGATCAGCTCAGACACCTGGAAGTCCTTAATGT CACATTGCTGATCAGCTGAGACACCTGGAAGTCCTTAATGT < 41bp 1 0.504708859413988 1 0.0292823016643524 experiment 0.990582281172024 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 TBCE ENSG00000116957 CDS Human protein_coding chr1:235590531 chr1:235590528 synonymous SNV . 0 hm6A_associated_SNPs_48589 0 0 1 1 235590515 235590539 mRNA hsa-miR-199b-5p TBCE miRanda miRanda
14034 chr11 65266556 65266556 1 + G T LUAD 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GTCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT < 41bp 1 0.0423173556708508 1 0.544758200645447 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 2 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266556 . . 0 hm6A_associated_SNPs_48607 0 0 1 3 65266539 65266560 lncRNA hsa-miR-1913 MALAT1 miRanda starBase2
14034 chr11 65266556 65266556 1 + G T LUAD 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GTCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT < 41bp 1 0.0423173556708508 1 0.544758200645447 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 2 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266556 . . 0 hm6A_associated_SNPs_48607 0 0 1 3 65266541 65266560 lncRNA hsa-miR-324-3p MALAT1 miRanda starBase2
14034 chr11 65266556 65266556 1 + G T LUAD 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GTCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT < 41bp 1 0.0423173556708508 1 0.544758200645447 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 2 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266556 . . 0 hm6A_associated_SNPs_48607 0 0 1 3 65266555 65266575 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr1 207533002 207533002 1 + C T LUAD 207533015 + 207532995 207533035 41 GACTGTTCCTAGTTTCTTAGACTTATCTGCATATTGGATAA GACTGTTTCTAGTTTCTTAGACTTATCTGCATATTGGATAA < 41bp 1 0.790107141830212 1 0.787497282028198 experiment 0.419785716339576 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 CD55 ENSG00000196352 CDS Human protein_coding chr1:207533015 chr1:207533002 synonymous SNV . 0 hm6A_associated_SNPs_48621 0 0 1 2 207532982 207533002 mRNA hsa-miR-212 CD55 miRanda miRanda
14034 chr1 207533002 207533002 1 + C T LUAD 207533015 + 207532995 207533035 41 GACTGTTCCTAGTTTCTTAGACTTATCTGCATATTGGATAA GACTGTTTCTAGTTTCTTAGACTTATCTGCATATTGGATAA < 41bp 1 0.790107141830212 1 0.787497282028198 experiment 0.419785716339576 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 CD55 ENSG00000196352 CDS Human protein_coding chr1:207533015 chr1:207533002 synonymous SNV . 0 hm6A_associated_SNPs_48621 0 0 1 2 207532980 207533002 mRNA hsa-miR-132 CD55 miRanda miRanda
14034 chr2 71626765 71626765 1 + G A LUAD 71626755 + 71626735 71626775 41 TGTCAAAAACAAAGACTCTAACAAACCTGTGACTATACCAG TGTCAAAAACAAAGACTCTAACAAACCTGTAACTATACCAG < 41bp 1 0.459983551825056 1 0.730492115020752 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71626755 chr2:71626765 synonymous SNV . 0 hm6A_associated_SNPs_48635 0 0 1 2 71626747 71626767 mRNA hsa-miR-27a ZNF638 miRanda miRanda
14034 chr2 71626765 71626765 1 + G A LUAD 71626755 + 71626735 71626775 41 TGTCAAAAACAAAGACTCTAACAAACCTGTGACTATACCAG TGTCAAAAACAAAGACTCTAACAAACCTGTAACTATACCAG < 41bp 1 0.459983551825056 1 0.730492115020752 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71626755 chr2:71626765 synonymous SNV . 0 hm6A_associated_SNPs_48635 0 0 1 2 71626747 71626767 mRNA hsa-miR-27b ZNF638 miRanda miRanda
14034 chrX 48759572 48759572 1 + C T LUAD 48759561 + 48759541 48759581 41 CAAGTCGGACAGGGGCCATGACAAGTCGGACCGCAGCCATG CAAGTCGGACAGGGGCCATGACAAGTCGGACTGCAGCCATG < 41bp 1 0.703669069915824 1 0.99445652961731 experiment 0.592661860168353 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 32 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759561 chrX:48759572 nonsynonymous SNV 0.127 3 hm6A_associated_SNPs_48646 0 0 1 1 48759571 48759593 mRNA hsa-miR-223 PQBP1 miRanda miRanda
14034 chrX 48759572 48759572 1 + C T LUAD 48759591 + 48759571 48759611 41 CCGCAGCCATGAGAAACTAGACAGGGGCCACGACAAGTCAG CTGCAGCCATGAGAAACTAGACAGGGGCCACGACAAGTCAG < 41bp 1 0.623553959651182 1 0.972100794315338 experiment 0.752892080697635 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 2 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759591 chrX:48759572 nonsynonymous SNV 0.127 3 hm6A_associated_SNPs_48647 0 0 1 1 48759571 48759593 mRNA hsa-miR-223 PQBP1 miRanda miRanda
14034 chr18 48573418 48573418 1 + T A LUAD 48573407 + 48573387 48573427 41 TATTTGATTTAAAAGGAAAAACTTGAACAAATGGACAATAT TATTTGATTTAAAAGGAAAAACTTGAACAAAAGGACAATAT < 41bp 1 0.752177632667626 1 0.97797703742981 experiment 0.495644734664748 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48573407 chr18:48573418 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48697 0 0 1 1 48573401 48573423 mRNA hsa-miR-136 SMAD4 miRanda miRanda
14034 chr7 100205337 100205337 1 + T C LUAD 100205343 + 100205323 100205363 41 GTCTTATTGGTGCTTATAAAACTGGAGGACTGGACCTGCCT GTCTTATTGGTGCTCATAAAACTGGAGGACTGGACCTGCCT < 41bp 1 0.268051452295983 1 0.943930625915527 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205343 chr7:100205337 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_48701 0 0 1 4 100205317 100205337 mRNA hsa-miR-29a PCOLCE miRanda miRanda
14034 chr7 100205337 100205337 1 + T C LUAD 100205343 + 100205323 100205363 41 GTCTTATTGGTGCTTATAAAACTGGAGGACTGGACCTGCCT GTCTTATTGGTGCTCATAAAACTGGAGGACTGGACCTGCCT < 41bp 1 0.268051452295983 1 0.943930625915527 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205343 chr7:100205337 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_48701 0 0 1 4 100205313 100205337 mRNA hsa-miR-29b PCOLCE miRanda miRanda
14034 chr7 100205337 100205337 1 + T C LUAD 100205343 + 100205323 100205363 41 GTCTTATTGGTGCTTATAAAACTGGAGGACTGGACCTGCCT GTCTTATTGGTGCTCATAAAACTGGAGGACTGGACCTGCCT < 41bp 1 0.268051452295983 1 0.943930625915527 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205343 chr7:100205337 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_48701 0 0 1 4 100205328 100205349 mRNA hsa-miR-145 PCOLCE miRanda miRanda
14034 chr7 100205337 100205337 1 + T C LUAD 100205343 + 100205323 100205363 41 GTCTTATTGGTGCTTATAAAACTGGAGGACTGGACCTGCCT GTCTTATTGGTGCTCATAAAACTGGAGGACTGGACCTGCCT < 41bp 1 0.268051452295983 1 0.943930625915527 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205343 chr7:100205337 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_48701 0 0 1 4 100205314 100205337 mRNA hsa-miR-29c PCOLCE miRanda miRanda
14034 chr5 175751758 175751758 1 + G C LUAD 175751739 + 175751719 175751759 41 GATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCAGA GATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCACA < 41bp 1 0.464871482065311 1 0.878308057785034 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 40 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175751739 chr5:175751758 nonsynonymous SNV 0.913 3 hm6A_associated_SNPs_48722 0 0 0 2 175751738 175751759 mRNA hsa-miR-149 C5orf25 miRanda miRanda
14034 chr5 175751758 175751758 1 + G C LUAD 175751739 + 175751719 175751759 41 GATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCAGA GATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCACA < 41bp 1 0.464871482065311 1 0.878308057785034 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 40 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175751739 chr5:175751758 nonsynonymous SNV 0.913 3 hm6A_associated_SNPs_48722 0 0 0 2 175751735 175751758 mRNA hsa-miR-328 C5orf25 miRanda miRanda
14034 chr5 56527069 56527069 1 + A T LUAD 56527064 + 56527044 56527084 41 CATGCAGGAAAAAGCCAAGGACTACATGAAAACAACATACC CATGCAGGAAAAAGCCAAGGACTACTTGAAAACAACATACC < 41bp 1 0.531660863081022 1 0.998986542224884 experiment 0.936678273837955 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56527064 chr5:56527069 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_48740 0 0 1 1 56527060 56527086 mRNA hsa-miR-196a GPBP1 miRanda miRanda
14034 chr16 30198429 30198429 1 + T C LUAD 30198413 + 30198393 30198433 41 GCACTGGGGCGGCCATGCTGACACTGGGCCCAGAGGTGCAC GCACTGGGGCGGCCATGCTGACACTGGGCCCAGAGGCGCAC < 41bp 1 0.642481601396495 1 0.949406623840332 experiment 0.71503679720701 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 37 CORO1A ENSG00000102879 CDS Human protein_coding chr16:30198413 chr16:30198429 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_48752 0 0 0 1 30198424 30198443 mRNA hsa-miR-187 CORO1A miRanda miRanda
14034 chr16 20482880 20482880 1 + G C LUAD 20482862 + 20482842 20482882 41 TTGTCTGTGTTTTCAGTTGGACAGGCCTGCAAGCCTCTGAT TTGTCTGTGTTTTCAGTTGGACAGGCCTGCAAGCCTCTCAT < 41bp 1 0.105077286714475 1 0.344454169273376 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 39 ACSM2A ENSG00000183747 CDS Human protein_coding chr16:20482862 chr16:20482880 nonsynonymous SNV 0.016 3 hm6A_associated_SNPs_48764 0 0 0 1 20482862 20482884 mRNA hsa-miR-361-5p ACSM2A miRanda miRanda
14034 chr8 133837560 133837560 1 + A T LUAD 133837567 + 133837547 133837587 41 AGAGACAAAGATCACTACAGACCAAAACAGAAGAAGAAGAA AGAGACAAAGATCTCTACAGACCAAAACAGAAGAAGAAGAA < 41bp 1 0.299219840828529 1 0.526154458522797 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133837567 chr8:133837560 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48767 0 0 1 3 133837551 133837572 mRNA hsa-miR-133a PHF20L1 miRanda miRanda
14034 chr8 133837560 133837560 1 + A T LUAD 133837567 + 133837547 133837587 41 AGAGACAAAGATCACTACAGACCAAAACAGAAGAAGAAGAA AGAGACAAAGATCTCTACAGACCAAAACAGAAGAAGAAGAA < 41bp 1 0.299219840828529 1 0.526154458522797 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133837567 chr8:133837560 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48767 0 0 1 3 133837543 133837565 mRNA hsa-miR-142-3p PHF20L1 miRanda miRanda
14034 chr8 133837560 133837560 1 + A T LUAD 133837567 + 133837547 133837587 41 AGAGACAAAGATCACTACAGACCAAAACAGAAGAAGAAGAA AGAGACAAAGATCTCTACAGACCAAAACAGAAGAAGAAGAA < 41bp 1 0.299219840828529 1 0.526154458522797 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133837567 chr8:133837560 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48767 0 0 1 3 133837551 133837572 mRNA hsa-miR-133b PHF20L1 miRanda miRanda
14034 chr8 133837560 133837560 1 + A T LUAD 133837573 + 133837553 133837593 41 AAAGATCACTACAGACCAAAACAGAAGAAGAAGAAAAAAAA AAAGATCTCTACAGACCAAAACAGAAGAAGAAGAAAAAAAA < 41bp 1 0.505687204846682 1 0.174609661102295 experiment 0.988625590306637 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 8 PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133837573 chr8:133837560 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48768 0 0 1 3 133837551 133837572 mRNA hsa-miR-133a PHF20L1 miRanda miRanda
14034 chr8 133837560 133837560 1 + A T LUAD 133837573 + 133837553 133837593 41 AAAGATCACTACAGACCAAAACAGAAGAAGAAGAAAAAAAA AAAGATCTCTACAGACCAAAACAGAAGAAGAAGAAAAAAAA < 41bp 1 0.505687204846682 1 0.174609661102295 experiment 0.988625590306637 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 8 PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133837573 chr8:133837560 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48768 0 0 1 3 133837543 133837565 mRNA hsa-miR-142-3p PHF20L1 miRanda miRanda
14034 chr8 133837560 133837560 1 + A T LUAD 133837573 + 133837553 133837593 41 AAAGATCACTACAGACCAAAACAGAAGAAGAAGAAAAAAAA AAAGATCTCTACAGACCAAAACAGAAGAAGAAGAAAAAAAA < 41bp 1 0.505687204846682 1 0.174609661102295 experiment 0.988625590306637 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 8 PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133837573 chr8:133837560 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48768 0 0 1 3 133837551 133837572 mRNA hsa-miR-133b PHF20L1 miRanda miRanda
14034 chr11 65266725 65266725 1 + G A LUAD 65266720 + 65266700 65266740 41 TTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGG TTTTAAGAGAAAATATGAAGACTTAAAAGAGTAGCATGAGG < 41bp 1 0.109041100625503 1 0.659138798713684 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266720 chr11:65266725 . . 0 hm6A_associated_SNPs_48776 0 0 1 1 65266724 65266743 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chrX 153662611 153662611 1 + C G LUAD 153662610 + 153662590 153662630 41 GGTCGCCAGCTGCTACAAAAACAGCCAGTATCACCTGTGAT GGTCGCCAGCTGCTACAAAAAGAGCCAGTATCACCTGTGAT Direct Loss 1 0.481598122139548 1 0.108619838953018 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153662610 chrX:153662611 nonsynonymous SNV 0.728 0 hm6A_associated_SNPs_48781 0 0 1 1 153662608 153662629 mRNA hsa-miR-128 ATP6AP1 miRanda miRanda
14034 chr10 22015257 22015257 1 + A G LUAD 22015273 + 22015253 22015293 41 TCTTATAGCTCAGTCTGAAAACAATCAAACAGGTAAGTTTT TCTTGTAGCTCAGTCTGAAAACAATCAAACAGGTAAGTTTT < 41bp 1 0.724756595804979 1 0.0291625261306763 experiment 0.550486808390043 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 MLLT10 ENSG00000078403 CDS Human protein_coding chr10:22015273 chr10:22015257 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_48799 0 0 1 1 22015237 22015258 mRNA hsa-miR-499-5p MLLT10 miRanda miRanda
14034 chr17 55184117 55184117 1 + C T LUAD 55184125 + 55184105 55184145 41 AGGGCTCACCACCACCAAAGACCTACGTGAGCTGCCTGAAG AGGGCTCACCACTACCAAAGACCTACGTGAGCTGCCTGAAG < 41bp 1 0.766442714688706 1 0.995507836341858 experiment 0.467114570622589 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 13 AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55184125 chr17:55184117 nonsynonymous SNV 0.224 1 hm6A_associated_SNPs_48822 0 0 1 1 55184101 55184125 mRNA hsa-miR-9 AKAP1 miRanda miRanda
14034 chr17 61662625 61662625 1 + A G LUAD 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTGTCGCCAGGTTAAACAGCCATCGAGCATGTGTCA < 41bp 1 0.654836536033734 1 0.00525987148284912 experiment 0.690326927932532 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662625 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48827 0 0 1 2 61662624 61662645 mRNA hsa-miR-25 DCAF7 miRanda miRanda
14034 chr17 61662625 61662625 1 + A G LUAD 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTGTCGCCAGGTTAAACAGCCATCGAGCATGTGTCA < 41bp 1 0.654836536033734 1 0.00525987148284912 experiment 0.690326927932532 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 24 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662625 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_48827 0 0 1 2 61662623 61662645 mRNA hsa-miR-367 DCAF7 miRanda miRanda
14034 chr22 35806852 35806852 1 + C T LUAD 35806832 + 35806812 35806852 41 GACTACCAGCAGGGGCCGTGACAGGGTGGGCGTGGGCATCC GACTACCAGCAGGGGCCGTGACAGGGTGGGCGTGGGCATCT < 41bp 1 0.608397978269575 1 0.0345298945903778 experiment 0.78320404346085 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35806832 chr22:35806852 stopgain 0.999 1 hm6A_associated_SNPs_48835 0 0 1 2 35806839 35806862 mRNA hsa-miR-28-5p MCM5 miRanda miRanda
14034 chr22 35806852 35806852 1 + C T LUAD 35806832 + 35806812 35806852 41 GACTACCAGCAGGGGCCGTGACAGGGTGGGCGTGGGCATCC GACTACCAGCAGGGGCCGTGACAGGGTGGGCGTGGGCATCT < 41bp 1 0.608397978269575 1 0.0345298945903778 experiment 0.78320404346085 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35806832 chr22:35806852 stopgain 0.999 1 hm6A_associated_SNPs_48835 0 0 1 2 35806840 35806862 mRNA hsa-miR-708 MCM5 miRanda miRanda
14034 chr4 44687997 44687997 1 + A G LUAD 44687994 + 44687974 44688014 41 AGATTTCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT AGATTTCTGCTAAACTTGGAACAGATGTTGAGAGTGTTCTT < 41bp 1 0.482242905661744 1 0.0144946873188019 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44687994 chr4:44687997 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_48875 0 0 1 2 44687977 44687998 mRNA hsa-miR-375 GUF1 miRanda miRanda
14034 chr4 44687997 44687997 1 + A G LUAD 44687994 + 44687974 44688014 41 AGATTTCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT AGATTTCTGCTAAACTTGGAACAGATGTTGAGAGTGTTCTT < 41bp 1 0.482242905661744 1 0.0144946873188019 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44687994 chr4:44687997 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_48875 0 0 1 2 44687982 44688006 mRNA hsa-miR-505 GUF1 miRanda miRanda
14034 chr11 6592204 6592204 1 + G A LUAD 6592215 + 6592195 6592235 41 TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC TTAGAGACCAAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC < 41bp 1 0.604353824050741 1 0.992229461669922 experiment 0.791292351898519 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 10 DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592215 chr11:6592204 nonsynonymous SNV 0.181 4 hm6A_associated_SNPs_48925 0 0 0 2 6592202 6592223 mRNA hsa-miR-24 DNHD1 miRanda miRanda
14034 chr11 6592204 6592204 1 + G A LUAD 6592215 + 6592195 6592235 41 TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC TTAGAGACCAAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC < 41bp 1 0.604353824050741 1 0.992229461669922 experiment 0.791292351898519 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 10 DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592215 chr11:6592204 nonsynonymous SNV 0.181 4 hm6A_associated_SNPs_48925 0 0 0 2 6592204 6592225 mRNA hsa-miR-149 DNHD1 miRanda miRanda
14034 chrX 22010739 22010739 1 + G T LUAD 22010759 + 22010739 22010779 41 GCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTG TCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTG < 41bp 1 0.461243595394996 1 0.455378621816635 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 1 SMS ENSG00000102172 CDS Human protein_coding chrX:22010759 chrX:22010739 nonsynonymous SNV 0.946 1 hm6A_associated_SNPs_48941 0 0 1 2 22010735 22010756 mRNA hsa-miR-376a SMS miRanda miRanda
14034 chrX 22010739 22010739 1 + G T LUAD 22010759 + 22010739 22010779 41 GCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTG TCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTG < 41bp 1 0.461243595394996 1 0.455378621816635 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 1 SMS ENSG00000102172 CDS Human protein_coding chrX:22010759 chrX:22010739 nonsynonymous SNV 0.946 1 hm6A_associated_SNPs_48941 0 0 1 2 22010734 22010756 mRNA hsa-miR-376b SMS miRanda miRanda
14034 chr7 151046189 151046189 1 + G C LUAD 151046181 + 151046161 151046201 41 CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCTGTGAAA CCTTGCTAAGCAGTACTCTGACAGACTACAATGCTGTGAAA < 41bp 1 0.639938375772813 1 0.433129519224167 experiment 0.720123248454374 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 29 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046181 chr7:151046189 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_48965 0 0 1 3 151046180 151046200 mRNA hsa-miR-27a NUB1 miRanda miRanda
14034 chr7 151046189 151046189 1 + G C LUAD 151046181 + 151046161 151046201 41 CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCTGTGAAA CCTTGCTAAGCAGTACTCTGACAGACTACAATGCTGTGAAA < 41bp 1 0.639938375772813 1 0.433129519224167 experiment 0.720123248454374 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 29 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046181 chr7:151046189 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_48965 0 0 1 3 151046187 151046209 mRNA hsa-miR-205 NUB1 miRanda miRanda
14034 chr7 151046189 151046189 1 + G C LUAD 151046181 + 151046161 151046201 41 CCTTGCTAAGCAGTACTCTGACAGACTAGAATGCTGTGAAA CCTTGCTAAGCAGTACTCTGACAGACTACAATGCTGTGAAA < 41bp 1 0.639938375772813 1 0.433129519224167 experiment 0.720123248454374 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 29 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046181 chr7:151046189 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_48965 0 0 1 3 151046180 151046200 mRNA hsa-miR-27b NUB1 miRanda miRanda
14034 chr16 89611126 89611126 1 + G A LUAD 89611107 + 89611087 89611127 41 GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTGA GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTAA < 41bp 1 0.776023783175542 1 0.902193427085876 experiment 0.447952433648915 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPG7 ENSG00000197912 CDS Human protein_coding chr16:89611107 chr16:89611126 synonymous SNV . 0 hm6A_associated_SNPs_48971 0 0 1 2 89611110 89611131 mRNA hsa-miR-376a SPG7 miRanda miRanda
14034 chr16 89611126 89611126 1 + G A LUAD 89611107 + 89611087 89611127 41 GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTGA GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTAA < 41bp 1 0.776023783175542 1 0.902193427085876 experiment 0.447952433648915 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 SPG7 ENSG00000197912 CDS Human protein_coding chr16:89611107 chr16:89611126 synonymous SNV . 0 hm6A_associated_SNPs_48971 0 0 1 2 89611109 89611131 mRNA hsa-miR-376b SPG7 miRanda miRanda
14034 chrX 152959807 152959807 1 + G T LUAD 152959827 + 152959807 152959847 41 GTACGTCTTCCAGCTGTTTGACTACTACTCGGCCAGCGGCA TTACGTCTTCCAGCTGTTTGACTACTACTCGGCCAGCGGCA < 41bp 1 0.219960907356598 1 0.809051632881165 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959827 chrX:152959807 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_48981 0 0 1 1 152959799 152959818 mRNA hsa-miR-7 SLC6A8 miRanda miRanda
14034 chrX 73045838 73045838 1 - C G LUAD 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG CTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG < 41bp 1 0.722195632554857 1 0.809960722923279 experiment 0.555608734890286 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045838 . . 0 hm6A_associated_SNPs_49038 0 0 1 3 73045831 73045852 lncRNA hsa-miR-4701-5p XIST miRanda starBase2
14034 chrX 73045838 73045838 1 - C G LUAD 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG CTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG < 41bp 1 0.722195632554857 1 0.809960722923279 experiment 0.555608734890286 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045838 . . 0 hm6A_associated_SNPs_49038 0 0 1 3 73045831 73045853 lncRNA hsa-miR-588 XIST miRanda starBase2
14034 chrX 73045838 73045838 1 - C G LUAD 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG CTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG < 41bp 1 0.722195632554857 1 0.809960722923279 experiment 0.555608734890286 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045838 . . 0 hm6A_associated_SNPs_49038 0 0 1 3 73045824 73045847 lncRNA hsa-miR-944 XIST miRanda starBase2
14034 chrX 73045838 73045838 1 - C G LUAD 73045855 - 73045835 73045875 41 GTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGG GTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTACTGG < 41bp 1 0.356077335017755 1 0.206961899995804 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045855 chrX:73045838 . . 0 hm6A_associated_SNPs_49039 0 0 1 3 73045831 73045852 lncRNA hsa-miR-4701-5p XIST miRanda starBase2
14034 chrX 73045838 73045838 1 - C G LUAD 73045855 - 73045835 73045875 41 GTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGG GTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTACTGG < 41bp 1 0.356077335017755 1 0.206961899995804 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045855 chrX:73045838 . . 0 hm6A_associated_SNPs_49039 0 0 1 3 73045831 73045853 lncRNA hsa-miR-588 XIST miRanda starBase2
14034 chrX 73045838 73045838 1 - C G LUAD 73045855 - 73045835 73045875 41 GTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGG GTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTACTGG < 41bp 1 0.356077335017755 1 0.206961899995804 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045855 chrX:73045838 . . 0 hm6A_associated_SNPs_49039 0 0 1 3 73045824 73045847 lncRNA hsa-miR-944 XIST miRanda starBase2
14034 chrX 73046187 73046187 1 - G A LUAD 73046176 - 73046156 73046196 41 TTAACTTCCCTCAGGAGCAGACATTCATATAGGTGATACTG TTAACTTCCTTCAGGAGCAGACATTCATATAGGTGATACTG < 41bp 1 0.789954919242985 1 0.809833526611328 experiment 0.42009016151403 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046176 chrX:73046187 . . 0 hm6A_associated_SNPs_49053 0 0 1 1 73046172 73046193 lncRNA hsa-miR-654-3p XIST miRanda starBase2
14034 chr7 142991330 142991330 1 + G T LUAD 142991344 + 142991324 142991364 41 TACTGTGGAACACTCCCTAGACAATAAAGATGGTCCTGTCT TACTGTTGAACACTCCCTAGACAATAAAGATGGTCCTGTCT < 41bp 1 0.649488315616135 1 0.0414774417877197 experiment 0.70102336876773 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 CASP2 ENSG00000106144 CDS Human protein_coding chr7:142991344 chr7:142991330 synonymous SNV . 0 hm6A_associated_SNPs_49067 0 0 1 1 142991323 142991340 mRNA hsa-miR-122 CASP2 miRanda miRanda
14034 chr17 59469394 59469394 1 + G A LUAD 59469374 + 59469354 59469394 41 AAGCATCGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCG AAGCATCGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCA < 41bp 1 0.692346138231247 1 0.984046101570129 experiment 0.615307723537506 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 41 BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59469374 chr17:59469394 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_49077 0 0 0 1 59469375 59469394 mRNA hsa-miR-138 BCAS3 miRanda miRanda
14034 chr4 4304168 4304168 1 + G T LUAD 4304187 + 4304167 4304207 41 TGCACAGAACTGCCTTTCAAACAGCCAAATTACTATTACAA TTCACAGAACTGCCTTTCAAACAGCCAAATTACTATTACAA < 41bp 1 0.737349415552919 1 0.989925026893616 experiment 0.525301168894163 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4304187 chr4:4304168 nonsynonymous SNV 0.021 3 hm6A_associated_SNPs_49104 0 0 0 2 4304147 4304168 mRNA hsa-miR-22 ZBTB49 miRanda miRanda
14034 chr4 4304168 4304168 1 + G T LUAD 4304187 + 4304167 4304207 41 TGCACAGAACTGCCTTTCAAACAGCCAAATTACTATTACAA TTCACAGAACTGCCTTTCAAACAGCCAAATTACTATTACAA < 41bp 1 0.737349415552919 1 0.989925026893616 experiment 0.525301168894163 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4304187 chr4:4304168 nonsynonymous SNV 0.021 3 hm6A_associated_SNPs_49104 0 0 0 2 4304166 4304186 mRNA hsa-miR-488 ZBTB49 miRanda miRanda
14034 chr11 34478335 34478335 1 + A G LUAD 34478351 + 34478331 34478371 41 TGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC TGGCGTTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC < 41bp 1 0.505254101079132 1 0.0559230446815491 experiment 0.989491797841736 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 5 CAT ENSG00000121691 CDS Human protein_coding chr11:34478351 chr11:34478335 nonsynonymous SNV 0.956 2 hm6A_associated_SNPs_49129 0 0 1 2 34478327 34478347 mRNA hsa-miR-193a-3p CAT miRanda miRanda
14034 chr11 34478335 34478335 1 + A G LUAD 34478351 + 34478331 34478371 41 TGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC TGGCGTTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC < 41bp 1 0.505254101079132 1 0.0559230446815491 experiment 0.989491797841736 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 5 CAT ENSG00000121691 CDS Human protein_coding chr11:34478351 chr11:34478335 nonsynonymous SNV 0.956 2 hm6A_associated_SNPs_49129 0 0 1 2 34478327 34478347 mRNA hsa-miR-193b CAT miRanda miRanda
14034 chr11 65270568 65270568 1 + C G LUAD 65270588 + 65270568 65270608 41 CAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCA GAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCA < 41bp 1 0.359336354482478 1 0.386001616716385 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270588 chr11:65270568 . . 0 hm6A_associated_SNPs_49142 0 0 1 3 65270552 65270577 lncRNA hsa-miR-494-3p MALAT1 miRanda starBase2
14034 chr11 65270568 65270568 1 + C G LUAD 65270588 + 65270568 65270608 41 CAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCA GAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCA < 41bp 1 0.359336354482478 1 0.386001616716385 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270588 chr11:65270568 . . 0 hm6A_associated_SNPs_49142 0 0 1 3 65270550 65270571 lncRNA hsa-miR-1271-5p MALAT1 miRanda starBase2
14034 chr11 65270568 65270568 1 + C G LUAD 65270588 + 65270568 65270608 41 CAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCA GAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCA < 41bp 1 0.359336354482478 1 0.386001616716385 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270588 chr11:65270568 . . 0 hm6A_associated_SNPs_49142 0 0 1 3 65270548 65270571 lncRNA hsa-miR-96-5p MALAT1 miRanda starBase2
14034 chr11 65273348 65273348 1 + G C LUAD 65273329 + 65273309 65273349 41 AACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGA AACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGCA < 41bp 1 0.726025536658071 1 0.463833063840866 experiment 0.547948926683858 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273329 chr11:65273348 . . 0 hm6A_associated_SNPs_49159 0 0 1 3 65273341 65273365 lncRNA hsa-miR-105-5p MALAT1 miRanda starBase2
14034 chr11 65273348 65273348 1 + G C LUAD 65273329 + 65273309 65273349 41 AACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGA AACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGCA < 41bp 1 0.726025536658071 1 0.463833063840866 experiment 0.547948926683858 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273329 chr11:65273348 . . 0 hm6A_associated_SNPs_49159 0 0 1 3 65273345 65273365 lncRNA hsa-miR-7853-5p MALAT1 miRanda starBase2
14034 chr11 65273348 65273348 1 + G C LUAD 65273329 + 65273309 65273349 41 AACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGA AACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGCA < 41bp 1 0.726025536658071 1 0.463833063840866 experiment 0.547948926683858 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273329 chr11:65273348 . . 0 hm6A_associated_SNPs_49159 0 0 1 3 65273348 65273368 lncRNA hsa-miR-888-5p MALAT1 miRanda starBase2
14034 chr11 65273348 65273348 1 + G C LUAD 65273336 + 65273316 65273356 41 ATGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATA ATGCTGGGTGGGAACATGTAACTTGTAGACTGCAGAAGATA < 41bp 1 0.501418162491512 1 0.308541119098663 experiment 0.997163675016976 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273336 chr11:65273348 . . 0 hm6A_associated_SNPs_49160 0 0 1 3 65273341 65273365 lncRNA hsa-miR-105-5p MALAT1 miRanda starBase2
14034 chr11 65273348 65273348 1 + G C LUAD 65273336 + 65273316 65273356 41 ATGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATA ATGCTGGGTGGGAACATGTAACTTGTAGACTGCAGAAGATA < 41bp 1 0.501418162491512 1 0.308541119098663 experiment 0.997163675016976 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273336 chr11:65273348 . . 0 hm6A_associated_SNPs_49160 0 0 1 3 65273345 65273365 lncRNA hsa-miR-7853-5p MALAT1 miRanda starBase2
14034 chr11 65273348 65273348 1 + G C LUAD 65273336 + 65273316 65273356 41 ATGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATA ATGCTGGGTGGGAACATGTAACTTGTAGACTGCAGAAGATA < 41bp 1 0.501418162491512 1 0.308541119098663 experiment 0.997163675016976 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273336 chr11:65273348 . . 0 hm6A_associated_SNPs_49160 0 0 1 3 65273348 65273368 lncRNA hsa-miR-888-5p MALAT1 miRanda starBase2
14034 chr4 106155487 106155487 1 + G C LUAD 106155470 + 106155450 106155490 41 GGCTAATGGAGAAAGACGTAACTTCGGGGTAAGCCAAGAAA GGCTAATGGAGAAAGACGTAACTTCGGGGTAAGCCAACAAA < 41bp 1 0.56276785613034 1 0.943237662315369 experiment 0.87446428773932 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 38 TET2 ENSG00000168769 CDS Human protein_coding chr4:106155470 chr4:106155487 nonsynonymous SNV 0.988 2 hm6A_associated_SNPs_49169 0 0 1 1 106155476 106155498 mRNA hsa-miR-876-5p TET2 miRanda miRanda
14034 chr7 99956683 99956683 1 + C T LUAD 99956681 + 99956661 99956701 41 AGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAG AGTTGCAGTCCATCAAGGGGACTAAACTCACCATCACCCAG < 41bp 1 0.342658174915493 1 0.919606924057007 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 PILRB ENSG00000121716 CDS Human protein_coding chr7:99956681 chr7:99956683 stopgain 0.095 0 hm6A_associated_SNPs_49180 0 0 1 2 99956665 99956686 mRNA hsa-miR-133a PILRB miRanda miRanda
14034 chr7 99956683 99956683 1 + C T LUAD 99956681 + 99956661 99956701 41 AGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAG AGTTGCAGTCCATCAAGGGGACTAAACTCACCATCACCCAG < 41bp 1 0.342658174915493 1 0.919606924057007 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 PILRB ENSG00000121716 CDS Human protein_coding chr7:99956681 chr7:99956683 stopgain 0.095 0 hm6A_associated_SNPs_49180 0 0 1 2 99956665 99956686 mRNA hsa-miR-133b PILRB miRanda miRanda
14034 chr12 7023108 7023108 1 + A G LUAD 7023117 + 7023097 7023137 41 GGGCAGCCACCACATGTATGACAGAGAACAGAGGATGCCTG GGGCAGCCACCGCATGTATGACAGAGAACAGAGGATGCCTG < 41bp 1 0.772086245512063 1 0.733105480670929 experiment 0.455827508975873 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 LRRC23 ENSG00000010626 CDS Human protein_coding chr12:7023117 chr12:7023108 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_49191 0 0 1 1 7023097 7023119 mRNA hsa-miR-505 LRRC23 miRanda miRanda
14034 chr5 102537262 102537262 1 + C T LUAD 102537282 + 102537262 102537302 41 CATCTCGGAAAAAGAATATAACTAGCAAAACAGAAACGCAT TATCTCGGAAAAAGAATATAACTAGCAAAACAGAAACGCAT < 41bp 1 0.755519867953449 1 0.919769287109375 experiment 0.488960264093103 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102537282 chr5:102537262 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_49233 0 0 1 1 102537244 102537263 mRNA hsa-miR-202 PPIP5K2 miRanda miRanda
14034 chr1 235577809 235577809 1 + A G LUAD 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTGCTGCAATTAAGA < 41bp 1 0.556389017620042 1 0.978160381317139 experiment 0.887221964759917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577809 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_49239 0 0 1 6 235577796 235577817 mRNA hsa-miR-25 TBCE miRanda miRanda
14034 chr1 235577809 235577809 1 + A G LUAD 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTGCTGCAATTAAGA < 41bp 1 0.556389017620042 1 0.978160381317139 experiment 0.887221964759917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577809 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_49239 0 0 1 6 235577797 235577817 mRNA hsa-miR-32 TBCE miRanda miRanda
14034 chr1 235577809 235577809 1 + A G LUAD 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTGCTGCAATTAAGA < 41bp 1 0.556389017620042 1 0.978160381317139 experiment 0.887221964759917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577809 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_49239 0 0 1 6 235577796 235577817 mRNA hsa-miR-92a TBCE miRanda miRanda
14034 chr1 235577809 235577809 1 + A G LUAD 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTGCTGCAATTAAGA < 41bp 1 0.556389017620042 1 0.978160381317139 experiment 0.887221964759917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577809 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_49239 0 0 1 6 235577796 235577817 mRNA hsa-miR-363 TBCE miRanda miRanda
14034 chr1 235577809 235577809 1 + A G LUAD 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTGCTGCAATTAAGA < 41bp 1 0.556389017620042 1 0.978160381317139 experiment 0.887221964759917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577809 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_49239 0 0 1 6 235577796 235577817 mRNA hsa-miR-367 TBCE miRanda miRanda
14034 chr1 235577809 235577809 1 + A G LUAD 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTGCTGCAATTAAGA < 41bp 1 0.556389017620042 1 0.978160381317139 experiment 0.887221964759917 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577809 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_49239 0 0 1 6 235577796 235577817 mRNA hsa-miR-92b TBCE miRanda miRanda
14034 chr4 155491675 155491675 1 + G A LUAD 155491676 + 155491656 155491696 41 GGCAGATACTACTGGGGTGGACAGTACACCTGGGACATGGC GGCAGATACTACTGGGGTGAACAGTACACCTGGGACATGGC < 41bp 1 0.694282019383891 1 0.932070136070251 experiment 0.611435961232218 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 20 FGB ENSG00000171564 CDS Human protein_coding chr4:155491676 chr4:155491675 nonsynonymous SNV 0.800 5 hm6A_associated_SNPs_49240 0 0 1 1 155491666 155491689 mRNA hsa-miR-199a-5p FGB miRanda miRanda
14034 chr4 155491675 155491675 1 + G A LUAD 155491690 + 155491670 155491710 41 GGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAG GGGTGAACAGTACACCTGGGACATGGCAAAGCATGGCACAG < 41bp 1 0.741344728785521 1 0.955264329910278 experiment 0.517310542428958 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 6 FGB ENSG00000171564 CDS Human protein_coding chr4:155491690 chr4:155491675 nonsynonymous SNV 0.800 5 hm6A_associated_SNPs_49241 0 0 1 1 155491666 155491689 mRNA hsa-miR-199a-5p FGB miRanda miRanda
14034 chr10 116930936 116930936 1 + G A LUAD 116930941 + 116930921 116930961 41 CAGCAGTATGCTGTGGAGGGACATTCAGCACATATTATGGA CAGCAGTATGCTGTGAAGGGACATTCAGCACATATTATGGA < 41bp 1 0.386134741667383 1 0.942916810512543 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 16 ATRNL1 ENSG00000107518 CDS Human protein_coding chr10:116930941 chr10:116930936 stopgain 1.000 3 hm6A_associated_SNPs_49251 0 0 1 1 116930933 116930954 mRNA hsa-miR-455-5p ATRNL1 miRanda miRanda
14034 chr9 106889718 106889718 1 + A T LUAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACATCATCAGCAAACATAAACGGGAGGCTGAAGA < 41bp 1 0.654066106428537 1 0.115148574113846 experiment 0.691867787142926 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889718 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_49260 0 0 1 2 106889705 106889729 mRNA hsa-miR-450a SMC2 miRanda miRanda
14034 chr9 106889718 106889718 1 + A T LUAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACATCATCAGCAAACATAAACGGGAGGCTGAAGA < 41bp 1 0.654066106428537 1 0.115148574113846 experiment 0.691867787142926 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889718 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_49260 0 0 1 2 106889698 106889719 mRNA hsa-miR-599 SMC2 miRanda miRanda
14034 chr4 52777283 52777283 1 + G T LUAD 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTTG < 41bp 1 0.596012405394273 1 0.835641622543335 experiment 0.807975189211453 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777283 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_49263 0 0 1 2 52777270 52777292 mRNA hsa-miR-212 DCUN1D4 miRanda miRanda
14034 chr4 52777283 52777283 1 + G T LUAD 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTTG < 41bp 1 0.596012405394273 1 0.835641622543335 experiment 0.807975189211453 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777283 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_49263 0 0 1 2 52777273 52777292 mRNA hsa-miR-132 DCUN1D4 miRanda miRanda
14034 chr10 115668188 115668188 1 + G C LUAD 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCACACAGCAGTGCTTGTATGATGA Direct Loss 1 0.603472611505377 1 0.075649619102478 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 20 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668188 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_49333 0 0 1 2 115668185 115668205 mRNA hsa-miR-381 NHLRC2 miRanda miRanda
14034 chr10 115668188 115668188 1 + G C LUAD 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCACACAGCAGTGCTTGTATGATGA Direct Loss 1 0.603472611505377 1 0.075649619102478 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 20 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668188 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_49333 0 0 1 2 115668185 115668205 mRNA hsa-miR-300 NHLRC2 miRanda miRanda
14034 chr10 116930946 116930946 1 + C A LUSC 116930941 + 116930921 116930961 41 CAGCAGTATGCTGTGGAGGGACATTCAGCACATATTATGGA CAGCAGTATGCTGTGGAGGGACATTAAGCACATATTATGGA < 41bp 1 0.384615605876793 1 0.909792900085449 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 26 ATRNL1 ENSG00000107518 CDS Human protein_coding chr10:116930941 chr10:116930946 stopgain 0.998 1 hm6A_associated_SNPs_49403 0 0 1 1 116930933 116930954 mRNA hsa-miR-455-5p ATRNL1 miRanda miRanda
14034 chr4 155491705 155491705 1 + G T LUSC 155491690 + 155491670 155491710 41 GGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAG GGGTGGACAGTACACCTGGGACATGGCAAAGCATGTCACAG < 41bp 1 0.760006561935452 1 0.95468533039093 experiment 0.479986876129095 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 36 FGB ENSG00000171564 CDS Human protein_coding chr4:155491690 chr4:155491705 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_49413 0 0 1 1 155491690 155491711 mRNA hsa-miR-455-5p FGB miRanda miRanda
14034 chr8 68107691 68107691 1 + A G LUSC 68107680 + 68107660 68107700 41 CATAGGGGATGACGGATCAAACTCTGTAGCAACTGAGCCCT CATAGGGGATGACGGATCAAACTCTGTAGCAGCTGAGCCCT < 41bp 1 0.65915236554263 1 0.879710137844086 experiment 0.68169526891474 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68107680 chr8:68107691 nonsynonymous SNV 0.929 1 hm6A_associated_SNPs_49447 0 0 1 1 68107677 68107699 mRNA hsa-miR-24 CSPP1 miRanda miRanda
14034 chr16 29974855 29974855 1 + G T LUSC 29974862 + 29974842 29974882 41 ACGGTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACA ACGGTCCAGACAGTAACAAGACCCGGACATTCCAGGCCACA < 41bp 1 0.396302779388185 1 0.820201635360718 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29974862 chr16:29974855 nonsynonymous SNV 0.906 0 hm6A_associated_SNPs_49461 0 0 1 3 29974854 29974875 mRNA hsa-miR-1 TMEM219 miRanda miRanda
14034 chr16 29974855 29974855 1 + G T LUSC 29974862 + 29974842 29974882 41 ACGGTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACA ACGGTCCAGACAGTAACAAGACCCGGACATTCCAGGCCACA < 41bp 1 0.396302779388185 1 0.820201635360718 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29974862 chr16:29974855 nonsynonymous SNV 0.906 0 hm6A_associated_SNPs_49461 0 0 1 3 29974855 29974875 mRNA hsa-miR-206 TMEM219 miRanda miRanda
14034 chr16 29974855 29974855 1 + G T LUSC 29974862 + 29974842 29974882 41 ACGGTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACA ACGGTCCAGACAGTAACAAGACCCGGACATTCCAGGCCACA < 41bp 1 0.396302779388185 1 0.820201635360718 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29974862 chr16:29974855 nonsynonymous SNV 0.906 0 hm6A_associated_SNPs_49461 0 0 1 3 29974855 29974875 mRNA hsa-miR-613 TMEM219 miRanda miRanda
14034 chr16 29974855 29974855 1 + G T LUSC 29974868 + 29974848 29974888 41 CAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTG CAGACAGTAACAAGACCCGGACATTCCAGGCCACAGTCCTG < 41bp 1 0.772481591135188 1 0.864216566085815 experiment 0.455036817729624 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29974868 chr16:29974855 nonsynonymous SNV 0.906 0 hm6A_associated_SNPs_49462 0 0 1 3 29974854 29974875 mRNA hsa-miR-1 TMEM219 miRanda miRanda
14034 chr16 29974855 29974855 1 + G T LUSC 29974868 + 29974848 29974888 41 CAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTG CAGACAGTAACAAGACCCGGACATTCCAGGCCACAGTCCTG < 41bp 1 0.772481591135188 1 0.864216566085815 experiment 0.455036817729624 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29974868 chr16:29974855 nonsynonymous SNV 0.906 0 hm6A_associated_SNPs_49462 0 0 1 3 29974855 29974875 mRNA hsa-miR-206 TMEM219 miRanda miRanda
14034 chr16 29974855 29974855 1 + G T LUSC 29974868 + 29974848 29974888 41 CAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTG CAGACAGTAACAAGACCCGGACATTCCAGGCCACAGTCCTG < 41bp 1 0.772481591135188 1 0.864216566085815 experiment 0.455036817729624 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29974868 chr16:29974855 nonsynonymous SNV 0.906 0 hm6A_associated_SNPs_49462 0 0 1 3 29974855 29974875 mRNA hsa-miR-613 TMEM219 miRanda miRanda
14034 chr1 231488729 231488729 1 + C G LUSC 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTGTCTTCTAGTTCTC < 41bp 1 0.589101871800029 1 0.764978170394897 experiment 0.821796256399942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 28 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488729 synonymous SNV . 0 hm6A_associated_SNPs_49476 0 0 1 2 231488721 231488743 mRNA hsa-miR-146a C1orf124 miRanda miRanda
14034 chr1 231488729 231488729 1 + C G LUSC 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTGTCTTCTAGTTCTC < 41bp 1 0.589101871800029 1 0.764978170394897 experiment 0.821796256399942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 28 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488729 synonymous SNV . 0 hm6A_associated_SNPs_49476 0 0 1 2 231488721 231488743 mRNA hsa-miR-146b-5p C1orf124 miRanda miRanda
14034 chr14 95080931 95080931 1 + C G LUSC 95080915 + 95080895 95080935 41 AGACCGAGGGACACACGTGGACCTCGGATTAGCCTCCGCCA AGACCGAGGGACACACGTGGACCTCGGATTAGCCTCGGCCA < 41bp 1 0.208233000752532 1 0.993040323257446 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 37 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080915 chr14:95080931 synonymous SNV . 0 hm6A_associated_SNPs_49514 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr14 95080931 95080931 1 + C G LUSC 95080942 + 95080922 95080962 41 ATTAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA ATTAGCCTCGGCCAACGTGGACTTCGCTTTCAGCCTGTACA < 41bp 1 0.375742985749476 1 0.997755646705627 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 10 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080942 chr14:95080931 synonymous SNV . 0 hm6A_associated_SNPs_49515 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr1 150307440 150307440 1 + C T LUSC 150307423 + 150307403 150307443 41 CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCAC CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACATCAC < 41bp 1 0.418191369779686 1 0.62194561958313 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307423 chr1:150307440 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_49524 0 0 1 1 150307424 150307445 mRNA hsa-miR-140-5p PRPF3 miRanda miRanda
14034 chr14 95080939 95080939 1 + T G LUSC 95080942 + 95080922 95080962 41 ATTAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA ATTAGCCTCCGCCAACGGGGACTTCGCTTTCAGCCTGTACA < 41bp 1 0.332060130996576 1 0.995044589042664 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 18 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080942 chr14:95080939 nonsynonymous SNV 0.001 1 hm6A_associated_SNPs_49542 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr1 233807193 233807193 1 + G A LUSC 233807182 + 233807162 233807202 41 GTCCTTCTCCTCGATCACAGACCAGGCAGCTGGCATGAAAG GTCCTTCTCCTCGATCACAGACCAGGCAGCTAGCATGAAAG < 41bp 1 0.739692712182588 1 0.926294982433319 experiment 0.520614575634824 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807182 chr1:233807193 nonsynonymous SNV 0.913 0 hm6A_associated_SNPs_49554 0 0 1 1 233807172 233807193 mRNA hsa-miR-22 KCNK1 miRanda miRanda
14034 chr10 116930950 116930950 1 + A T LUSC 116930941 + 116930921 116930961 41 CAGCAGTATGCTGTGGAGGGACATTCAGCACATATTATGGA CAGCAGTATGCTGTGGAGGGACATTCAGCTCATATTATGGA < 41bp 1 0.39454923109727 1 0.885567426681519 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 ATRNL1 ENSG00000107518 CDS Human protein_coding chr10:116930941 chr10:116930950 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_49580 0 0 1 1 116930933 116930954 mRNA hsa-miR-455-5p ATRNL1 miRanda miRanda
14034 chr20 44444530 44444530 1 + C T LUSC 44444517 + 44444497 44444537 41 CAACATTGATAGTCCCTTGAACACACATGCTGCCGAGCTCT CAACATTGATAGTCCCTTGAACACACATGCTGCTGAGCTCT < 41bp 1 0.686193766581694 1 0.0839887261390686 experiment 0.627612466836613 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 UBE2C ENSG00000175063 CDS Human protein_coding chr20:44444517 chr20:44444530 synonymous SNV . 0 hm6A_associated_SNPs_49593 0 0 1 2 44444517 44444530 mRNA hsa-miR-103 UBE2C miRanda miRanda
14034 chr20 44444530 44444530 1 + C T LUSC 44444517 + 44444497 44444537 41 CAACATTGATAGTCCCTTGAACACACATGCTGCCGAGCTCT CAACATTGATAGTCCCTTGAACACACATGCTGCTGAGCTCT < 41bp 1 0.686193766581694 1 0.0839887261390686 experiment 0.627612466836613 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 UBE2C ENSG00000175063 CDS Human protein_coding chr20:44444517 chr20:44444530 synonymous SNV . 0 hm6A_associated_SNPs_49593 0 0 1 2 44444517 44444530 mRNA hsa-miR-107 UBE2C miRanda miRanda
14034 chr2 27280206 27280206 1 + C T LUSC 27280212 + 27280192 27280232 41 CAACACTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC CAACACTGGACGCTTAGTAAACAGCATCCCTGCTGCCTGCC < 41bp 1 0.598731037406622 1 0.0762313902378082 experiment 0.802537925186755 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 15 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280212 chr2:27280206 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_49613 0 0 1 1 27280206 27280227 mRNA hsa-miR-214 AGBL5 miRanda miRanda
14034 chr14 104053637 104053637 1 + G C LUSC 104053647 + 104053627 104053667 41 GAATGCAGAAGAAATGGCGGACTTCTACAAGGAATTTTTAA GAATGCAGAACAAATGGCGGACTTCTACAAGGAATTTTTAA < 41bp 1 0.424575566867948 1 0.550014495849609 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 APOPT1 ENSG00000256053;ENSG00000256500 CDS Human other chr14:104053647 chr14:104053637 nonsynonymous SNV 0.975 3 hm6A_associated_SNPs_49628 0 0 1 1 104053616 104053637 mRNA hsa-miR-544 C14orf153 miRanda miRanda
14034 chr2 277020 277020 1 + G C LUSC 277031 + 277011 277051 41 ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC ACCTGCAAACCTAAAATTGAACTACTTGGGAGCTATGATCC < 41bp 1 0.622507570393142 1 0.906736791133881 experiment 0.754984859213717 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 10 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277031 chr2:277020 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_49674 0 0 1 1 277009 277029 mRNA hsa-miR-590-3p ACP1 miRanda miRanda
14034 chr11 36680701 36680701 1 + G A LUSC 36680714 + 36680694 36680734 41 GAGAAAGGACACCAGCCCAGACTTAGAGAAATCCTGTGACT GAGAAAGAACACCAGCCCAGACTTAGAGAAATCCTGTGACT < 41bp 1 0.287835025298421 1 0.715918660163879 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680714 chr11:36680701 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_49714 0 0 1 1 36680688 36680710 mRNA hsa-miR-138 C11orf74 miRanda miRanda
14034 chr3 196449387 196449387 1 + C T LUSC 196449373 + 196449353 196449393 41 AAACAGGACATTCCTGCAGGACTTTATGTGGATCCGTATGA AAACAGGACATTCCTGCAGGACTTTATGTGGATCTGTATGA < 41bp 1 0.589808952555328 1 0.915770053863525 experiment 0.820382094889345 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 PIGX ENSG00000163964 CDS Human protein_coding chr3:196449373 chr3:196449387 nonsynonymous SNV 0.961 4 hm6A_associated_SNPs_49719 0 0 1 1 196449368 196449389 mRNA hsa-miR-127-3p PIGX miRanda miRanda
14034 chr7 104747986 104747986 1 + G C LUSC 104747982 + 104747962 104748002 41 GTGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAAC GTGTCAGACCTTCAGCTAGGACTCCATGCAGTTGAGCCAAC < 41bp 1 0.770373741730114 1 0.987870931625366 experiment 0.459252516539773 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747982 chr7:104747986 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_49727 0 0 1 2 104747985 104748007 mRNA hsa-miR-34a MLL5 miRanda miRanda
14034 chr7 104747986 104747986 1 + G C LUSC 104747982 + 104747962 104748002 41 GTGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAAC GTGTCAGACCTTCAGCTAGGACTCCATGCAGTTGAGCCAAC < 41bp 1 0.770373741730114 1 0.987870931625366 experiment 0.459252516539773 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 25 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747982 chr7:104747986 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_49727 0 0 1 2 104747972 104747994 mRNA hsa-miR-217 MLL5 miRanda miRanda
14034 chr7 100205338 100205338 1 + A G LUSC 100205343 + 100205323 100205363 41 GTCTTATTGGTGCTTATAAAACTGGAGGACTGGACCTGCCT GTCTTATTGGTGCTTGTAAAACTGGAGGACTGGACCTGCCT < 41bp 1 0.256178113689035 1 0.941478729248047 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205343 chr7:100205338 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_49743 0 0 1 1 100205328 100205349 mRNA hsa-miR-145 PCOLCE miRanda miRanda
14034 chr5 56545283 56545283 1 + G A LUSC 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTGACAAACTTAATCAGCAACCTCGTCT < 41bp 1 0.404226127250848 1 0.371111273765564 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545283 synonymous SNV . 0 hm6A_associated_SNPs_49847 0 0 1 2 56545282 56545304 mRNA hsa-miR-223 GPBP1 miRanda miRanda
14034 chr5 56545283 56545283 1 + G A LUSC 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TCCTCTTCTCCTGTTGACAAACTTAATCAGCAACCTCGTCT < 41bp 1 0.404226127250848 1 0.371111273765564 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545283 synonymous SNV . 0 hm6A_associated_SNPs_49847 0 0 1 2 56545270 56545288 mRNA hsa-miR-485-5p GPBP1 miRanda miRanda
14034 chr4 74280824 74280824 1 + T C LUSC 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCTGCTGAGACTTGCCAAGACATACGAAACCACTCTAGAG < 41bp 1 0.437146696066727 1 0.0967981517314911 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 26 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280824 synonymous SNV . 0 hm6A_associated_SNPs_49851 0 0 1 1 74280816 74280834 mRNA hsa-miR-140-5p ALB miRanda miRanda
14034 chr4 74280824 74280824 1 + T C LUSC 74280828 + 74280808 74280848 41 GACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGT GACTTGCCAAGACATACGAAACCACTCTAGAGAAGTGCTGT < 41bp 1 0.0746976090225035 1 0.0255633294582367 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 17 ALB ENSG00000163631 CDS Human protein_coding chr4:74280828 chr4:74280824 synonymous SNV . 0 hm6A_associated_SNPs_49852 0 0 1 1 74280816 74280834 mRNA hsa-miR-140-5p ALB miRanda miRanda
14034 chr2 234365572 234365572 1 + T A LUSC 234365559 + 234365539 234365579 41 TTCTAGGAGCCGAACCAAGAACATGATGTGGTATGGAGTTC TTCTAGGAGCCGAACCAAGAACATGATGTGGTAAGGAGTTC < 41bp 1 0.414298198498778 1 0.946709811687469 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 34 DGKD ENSG00000077044 CDS Human protein_coding chr2:234365559 chr2:234365572 stopgain 0.943 1 hm6A_associated_SNPs_49879 0 0 1 1 234365569 234365592 mRNA hsa-miR-9 DGKD miRanda miRanda
14034 chr15 25219583 25219583 1 + T G LUSC 25219575 + 25219555 25219595 41 GCATCAAGTTTTAACTGTGGACATTGGATTTGGTGGAACAG GCATCAAGTTTTAACTGTGGACATTGGAGTTGGTGGAACAG < 41bp 1 0.360866929630373 1 0.762471377849579 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SNHG14 ENSG00000128739;ENSG00000273173 UTR5;UTR3 Human other chr15:25219575 chr15:25219583 . . 0 hm6A_associated_SNPs_49887 0 0 1 1 25219582 25219603 mRNA hsa-miR-433 SNURF miRanda miRanda
14034 chr8 68005814 68005814 1 + C T LUSC 68005800 + 68005780 68005820 41 AAGGTTGAAACTTGAACGTAACAAAGAATACAATCAGTTTC AAGGTTGAAACTTGAACGTAACAAAGAATACAATTAGTTTC < 41bp 1 0.435942998313855 1 0.124803572893143 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68005800 chr8:68005814 stopgain 1.000 0 hm6A_associated_SNPs_49908 0 0 1 2 68005807 68005827 mRNA hsa-miR-125b CSPP1 miRanda miRanda
14034 chr8 68005814 68005814 1 + C T LUSC 68005800 + 68005780 68005820 41 AAGGTTGAAACTTGAACGTAACAAAGAATACAATCAGTTTC AAGGTTGAAACTTGAACGTAACAAAGAATACAATTAGTTTC < 41bp 1 0.435942998313855 1 0.124803572893143 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68005800 chr8:68005814 stopgain 1.000 0 hm6A_associated_SNPs_49908 0 0 1 2 68005804 68005827 mRNA hsa-miR-125a-5p CSPP1 miRanda miRanda
14034 chr9 139983450 139983450 1 + C T LUSC 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGAGAACTTACCTGAGATTTTGTCAC < 41bp 1 0.779003599071404 1 0.821357607841492 experiment 0.441992801857192 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983450 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_49957 0 0 1 1 139983449 139983457 mRNA hsa-miR-599 MAN1B1 miRanda miRanda
14034 chr7 17382550 17382550 1 + G C LUSC 17382569 + 17382549 17382589 41 AGAATGGAGTTTTAAATGAAACATATCCAGCTGAATTAAAT ACAATGGAGTTTTAAATGAAACATATCCAGCTGAATTAAAT < 41bp 1 0.747888675227528 1 0.754683971405029 experiment 0.504222649544945 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 AHR ENSG00000106546 CDS Human protein_coding chr7:17382569 chr7:17382550 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_49998 0 0 0 1 17382545 17382558 mRNA hsa-miR-136 AHR miRanda miRanda
14034 chr8 42940421 42940421 1 + A G LUSC 42940425 + 42940405 42940445 41 CCAACAAATGTACAGCAATAACACCATCCAGAAGAACTTGA CCAACAAATGTACAGCGATAACACCATCCAGAAGAACTTGA < 41bp 1 0.72411269195595 1 0.947301208972931 experiment 0.551774616088099 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 17 FNTA ENSG00000168522 CDS Human protein_coding chr8:42940425 chr8:42940421 nonsynonymous SNV 0.575 2 hm6A_associated_SNPs_50010 0 0 0 1 42940403 42940425 mRNA hsa-miR-137 FNTA miRanda miRanda
14034 chr3 57545543 57545543 1 + G T LUSC 57545539 + 57545519 57545559 41 CTGAAAAGTGCTTGTGGTGAACCTGCTTACACAAATTATGT CTGAAAAGTGCTTGTGGTGAACCTTCTTACACAAATTATGT < 41bp 1 0.653047254013219 1 0.796453714370728 experiment 0.693905491973562 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 25 PDE12 ENSG00000174840 CDS Human protein_coding chr3:57545539 chr3:57545543 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50013 0 0 1 1 57545530 57545553 mRNA hsa-miR-599 PDE12 miRanda miRanda
14034 chr5 32601170 32601170 1 + G A LUSC 32601184 + 32601164 32601204 41 ATTGATGATGCAGTAAGAAAACTGTAAAATTCGAGCCATAT ATTGATAATGCAGTAAGAAAACTGTAAAATTCGAGCCATAT < 41bp 1 0.721447681611707 1 0.919549107551575 experiment 0.557104636776587 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 SUB1 ENSG00000113387 CDS Human protein_coding chr5:32601184 chr5:32601170 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50015 0 0 1 1 32601157 32601178 mRNA hsa-miR-217 SUB1 miRanda miRanda
14034 chr11 65268988 65268988 1 + G A LUSC 65268970 + 65268950 65268990 41 AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAA AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTAAA < 41bp 1 0.0168370428802175 1 0.695863604545593 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268970 chr11:65268988 . . 0 hm6A_associated_SNPs_50056 0 0 1 4 65268974 65268990 lncRNA hsa-miR-1297 MALAT1 miRanda starBase2
14034 chr11 65268988 65268988 1 + G A LUSC 65268970 + 65268950 65268990 41 AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAA AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTAAA < 41bp 1 0.0168370428802175 1 0.695863604545593 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268970 chr11:65268988 . . 0 hm6A_associated_SNPs_50056 0 0 1 4 65268969 65268990 lncRNA hsa-miR-26a-5p MALAT1 miRanda starBase2
14034 chr11 65268988 65268988 1 + G A LUSC 65268970 + 65268950 65268990 41 AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAA AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTAAA < 41bp 1 0.0168370428802175 1 0.695863604545593 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268970 chr11:65268988 . . 0 hm6A_associated_SNPs_50056 0 0 1 4 65268970 65268990 lncRNA hsa-miR-26b-5p MALAT1 miRanda starBase2
14034 chr11 65268988 65268988 1 + G A LUSC 65268970 + 65268950 65268990 41 AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAA AAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTAAA < 41bp 1 0.0168370428802175 1 0.695863604545593 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268970 chr11:65268988 . . 0 hm6A_associated_SNPs_50056 0 0 1 4 65268967 65268990 lncRNA hsa-miR-4465 MALAT1 miRanda starBase2
14034 chr16 58550533 58550533 1 + C T LUSC 58550538 + 58550518 58550558 41 CTCAGGGTTCGCTCCCTAGAACTCTACCACCAGCTGGTGGC CTCAGGGTTCGCTCCTTAGAACTCTACCACCAGCTGGTGGC < 41bp 1 0.493178712340338 1 0.978506445884705 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550538 chr16:58550533 synonymous SNV . 0 hm6A_associated_SNPs_50064 0 0 1 1 58550529 58550552 mRNA hsa-miR-138 SETD6 miRanda miRanda
14034 chr11 67201893 67201893 1 + C T LUSC 67201906 + 67201886 67201926 41 CACACGGCAGACGCCGGTGGACAGTCCTGATGACACAGCCC CACACGGTAGACGCCGGTGGACAGTCCTGATGACACAGCCC < 41bp 1 0.61399181818917 1 0.936871528625488 experiment 0.772016363621659 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 8 RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201906 chr11:67201893 stopgain 0.985 1 hm6A_associated_SNPs_50067 0 0 1 1 67201876 67201898 mRNA hsa-miR-346 RPS6KB2 miRanda miRanda
14034 chr3 158409239 158409239 1 + G T LUSC 158409256 + 158409236 158409276 41 AAAGGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA AAATGAAAAGCCAAGAACTAACTTTGCTTACTGTGAGTTGA < 41bp 1 0.764611087176792 1 0.844615340232849 experiment 0.470777825646416 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158409256 chr3:158409239 stopgain 0.998 1 hm6A_associated_SNPs_50083 0 0 1 1 158409238 158409260 mRNA hsa-miR-382 GFM1 miRanda miRanda
14034 chr5 40936549 40936549 1 + C T LUSC 40936566 + 40936546 40936586 41 TATCGATAAACCTCCTCCTAACATAGAACTTACTGGAAATG TATTGATAAACCTCCTCCTAACATAGAACTTACTGGAAATG < 41bp 1 0.243675068263709 1 0.209251821041107 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 C7 ENSG00000112936 CDS Human protein_coding chr5:40936566 chr5:40936549 synonymous SNV . 0 hm6A_associated_SNPs_50096 0 0 0 1 40936537 40936559 mRNA hsa-miR-154 C7 miRanda miRanda
14034 chr1 203276491 203276491 1 + C T LUSC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTTCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA < 41bp 1 0.621396857489838 1 0.995920240879059 experiment 0.757206285020323 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276491 synonymous SNV . 0 hm6A_associated_SNPs_50166 0 0 1 1 203276477 203276500 mRNA hsa-miR-125a-3p BTG2 miRanda miRanda
14034 chr19 582522 582522 1 + G T LUSC 582540 + 582520 582560 41 CAGCGGGCAGCACCAGAATGACAAAGGCAAGAACGTCCGCC CATCGGGCAGCACCAGAATGACAAAGGCAAGAACGTCCGCC < 41bp 1 0.762244986751577 1 0.955922365188599 experiment 0.475510026496845 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 BSG ENSG00000172270 CDS Human protein_coding chr19:582540 chr19:582522 nonsynonymous SNV 0.013 2 hm6A_associated_SNPs_50185 0 0 1 2 582514 582533 mRNA hsa-miR-346 BSG miRanda miRanda
14034 chr19 582522 582522 1 + G T LUSC 582540 + 582520 582560 41 CAGCGGGCAGCACCAGAATGACAAAGGCAAGAACGTCCGCC CATCGGGCAGCACCAGAATGACAAAGGCAAGAACGTCCGCC < 41bp 1 0.762244986751577 1 0.955922365188599 experiment 0.475510026496845 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 BSG ENSG00000172270 CDS Human protein_coding chr19:582540 chr19:582522 nonsynonymous SNV 0.013 2 hm6A_associated_SNPs_50185 0 0 1 2 582510 582533 mRNA hsa-miR-346 BSG miRanda miRanda
14034 chr15 79183853 79183853 1 + C A LUSC 79183861 + 79183841 79183881 41 ATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTCGGAAG ATGGTGGCAGTAACAGTGAGACCCCTCAGCCTCCTCGGAAG < 41bp 1 0.110490320657476 1 0.787598490715027 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 13 MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79183861 chr15:79183853 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50191 0 0 1 1 79183853 79183874 mRNA hsa-miR-485-5p MORF4L1 miRanda miRanda
14034 chr9 6460727 6460727 1 + G A LUSC 6460745 + 6460725 6460765 41 CAGAAATTACCACATTGAAGACAATCTCAAGGACCAAAAAA CAAAAATTACCACATTGAAGACAATCTCAAGGACCAAAAAA < 41bp 1 0.760309512946162 1 0.993361234664917 experiment 0.479380974107676 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6460745 chr9:6460727 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50234 0 0 1 2 6460727 6460751 mRNA hsa-miR-219-5p UHRF2 miRanda miRanda
14034 chr9 6460727 6460727 1 + G A LUSC 6460745 + 6460725 6460765 41 CAGAAATTACCACATTGAAGACAATCTCAAGGACCAAAAAA CAAAAATTACCACATTGAAGACAATCTCAAGGACCAAAAAA < 41bp 1 0.760309512946162 1 0.993361234664917 experiment 0.479380974107676 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6460745 chr9:6460727 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50234 0 0 1 2 6460711 6460730 mRNA hsa-miR-544 UHRF2 miRanda miRanda
14034 chr2 190719313 190719313 1 + A C LUSC 190719311 + 190719291 190719331 41 CACTAAGAATGCATTTCAGGACATTTCAATGAGTAATGTAT CACTAAGAATGCATTTCAGGACCTTTCAATGAGTAATGTAT < 41bp 1 0.306913558060555 1 0.854131102561951 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 23 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190719311 chr2:190719313 nonsynonymous SNV 0.011 1 hm6A_associated_SNPs_50279 0 0 1 1 190719298 190719319 mRNA hsa-miR-203 PMS1 miRanda miRanda
14034 chr10 69881727 69881727 1 + T A LUSC 69881717 + 69881697 69881737 41 CACAGCTCCAAAAGGATTAGACCTCGTGCCTGCAAAAACCA CACAGCTCCAAAAGGATTAGACCTCGTGCCAGCAAAAACCA < 41bp 1 0.720638658863754 1 0.985056817531586 experiment 0.558722682272493 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881717 chr10:69881727 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50320 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr10 69881727 69881727 1 + T A LUSC 69881734 + 69881714 69881754 41 TAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT TAGACCTCGTGCCAGCAAAAACCACAAGAGTAAACTGGAAT < 41bp 1 0.67089563458794 1 0.994644641876221 experiment 0.658208730824121 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881734 chr10:69881727 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50321 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr10 69881727 69881727 1 + T A LUSC 69881747 + 69881727 69881767 41 TGCAAAAACCACAAGAGTAAACTGGAATCTCAAAACAAAGT AGCAAAAACCACAAGAGTAAACTGGAATCTCAAAACAAAGT < 41bp 1 0.761593659055465 1 0.996752977371216 experiment 0.476812681889069 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881747 chr10:69881727 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50322 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr10 17271981 17271981 1 + A G LUSC 17271963 + 17271943 17271983 41 GCGCGACAACCTGGCCGAGGACATCATGCGCCTCCGGGAGA GCGCGACAACCTGGCCGAGGACATCATGCGCCTCCGGGGGA < 41bp 1 0.641002255756666 1 0.99986606836319 experiment 0.717995488486668 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 VIM ENSG00000026025 CDS Human protein_coding chr10:17271963 chr10:17271981 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_50325 0 0 1 1 17271973 17271984 mRNA hsa-miR-505 VIM miRanda miRanda
14034 chr16 24231360 24231360 1 + T A LUSC 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCATCATCATGAACTTGGA < 41bp 1 0.449036577847624 1 0.96145761013031 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231360 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50338 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231360 24231360 1 + T A LUSC 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCATCATCATGAACTTGGA < 41bp 1 0.449036577847624 1 0.96145761013031 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231360 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50338 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr16 24231360 24231360 1 + T A LUSC 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCATCATCATGAACTTGGA < 41bp 1 0.449036577847624 1 0.96145761013031 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231360 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50338 0 0 1 3 24231346 24231370 mRNA hsa-miR-433 PRKCB miRanda miRanda
14034 chr16 24231360 24231360 1 + T A LUSC 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCATCATCATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.527706801304619 1 0.975775897502899 experiment 0.944586397390762 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231360 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50339 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231360 24231360 1 + T A LUSC 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCATCATCATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.527706801304619 1 0.975775897502899 experiment 0.944586397390762 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231360 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50339 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr16 24231360 24231360 1 + T A LUSC 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCATCATCATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.527706801304619 1 0.975775897502899 experiment 0.944586397390762 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231360 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_50339 0 0 1 3 24231346 24231370 mRNA hsa-miR-433 PRKCB miRanda miRanda
14034 chr7 135309982 135309982 1 + C G LUSC 135309985 + 135309965 135310005 41 GTGGCTTTTGTATCTTTCTAACAGTGGCTACTTGAAGGTCC GTGGCTTTTGTATCTTTGTAACAGTGGCTACTTGAAGGTCC < 41bp 1 0.667586570940648 1 0.862572550773621 experiment 0.664826858118704 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135309985 chr7:135309982 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_50344 0 0 1 2 135309979 135310000 mRNA hsa-miR-26a NUP205 miRanda miRanda
14034 chr7 135309982 135309982 1 + C G LUSC 135309985 + 135309965 135310005 41 GTGGCTTTTGTATCTTTCTAACAGTGGCTACTTGAAGGTCC GTGGCTTTTGTATCTTTGTAACAGTGGCTACTTGAAGGTCC < 41bp 1 0.667586570940648 1 0.862572550773621 experiment 0.664826858118704 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135309985 chr7:135309982 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_50344 0 0 1 2 135309980 135310000 mRNA hsa-miR-26b NUP205 miRanda miRanda
14034 chr14 22564779 22564779 1 + A T LUSC 22564774 + 22564754 22564794 41 ATTCGCCAGGGTTCTGATGAACAGAATGCAAAAAGTGGTCG ATTCGCCAGGGTTCTGATGAACAGATTGCAAAAAGTGGTCG < 41bp 1 0.0292814702203336 1 0.965392351150513 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 OR4E1;LINC02332 ENSG00000211804 CDS Human TR_V_gene chr14:22564774 chr14:22564779 nonsynonymous SNV . 0 hm6A_associated_SNPs_50371 0 0 0 5 22564766 22564784 mRNA hsa-miR-33a TRD@ miRanda miRanda
14034 chr14 22564779 22564779 1 + A T LUSC 22564774 + 22564754 22564794 41 ATTCGCCAGGGTTCTGATGAACAGAATGCAAAAAGTGGTCG ATTCGCCAGGGTTCTGATGAACAGATTGCAAAAAGTGGTCG < 41bp 1 0.0292814702203336 1 0.965392351150513 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 OR4E1;LINC02332 ENSG00000211804 CDS Human TR_V_gene chr14:22564774 chr14:22564779 nonsynonymous SNV . 0 hm6A_associated_SNPs_50371 0 0 0 5 22564771 22564797 mRNA hsa-miR-29b TRD@ miRanda miRanda
14034 chr14 22564779 22564779 1 + A T LUSC 22564774 + 22564754 22564794 41 ATTCGCCAGGGTTCTGATGAACAGAATGCAAAAAGTGGTCG ATTCGCCAGGGTTCTGATGAACAGATTGCAAAAAGTGGTCG < 41bp 1 0.0292814702203336 1 0.965392351150513 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 OR4E1;LINC02332 ENSG00000211804 CDS Human TR_V_gene chr14:22564774 chr14:22564779 nonsynonymous SNV . 0 hm6A_associated_SNPs_50371 0 0 0 5 22564768 22564788 mRNA hsa-miR-129-5p TRD@ miRanda miRanda
14034 chr14 22564779 22564779 1 + A T LUSC 22564774 + 22564754 22564794 41 ATTCGCCAGGGTTCTGATGAACAGAATGCAAAAAGTGGTCG ATTCGCCAGGGTTCTGATGAACAGATTGCAAAAAGTGGTCG < 41bp 1 0.0292814702203336 1 0.965392351150513 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 OR4E1;LINC02332 ENSG00000211804 CDS Human TR_V_gene chr14:22564774 chr14:22564779 nonsynonymous SNV . 0 hm6A_associated_SNPs_50371 0 0 0 5 22564772 22564797 mRNA hsa-miR-29c TRD@ miRanda miRanda
14034 chr14 22564779 22564779 1 + A T LUSC 22564774 + 22564754 22564794 41 ATTCGCCAGGGTTCTGATGAACAGAATGCAAAAAGTGGTCG ATTCGCCAGGGTTCTGATGAACAGATTGCAAAAAGTGGTCG < 41bp 1 0.0292814702203336 1 0.965392351150513 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 OR4E1;LINC02332 ENSG00000211804 CDS Human TR_V_gene chr14:22564774 chr14:22564779 nonsynonymous SNV . 0 hm6A_associated_SNPs_50371 0 0 0 5 22564767 22564784 mRNA hsa-miR-33b TRD@ miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-302a TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-302b TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-302c TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-302d TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-372 TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-373 TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517527 73517547 mRNA hsa-miR-520e TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-520a-3p TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517527 73517547 mRNA hsa-miR-520b TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-520c-3p TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517526 73517547 mRNA hsa-miR-520d-3p TSEN54 miRanda miRanda
14034 chr17 73517538 73517538 1 + G T LUSC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTTCAGC < 41bp 1 0.353995409849674 1 0.127225160598755 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517538 synonymous SNV . 0 hm6A_associated_SNPs_50374 0 0 1 12 73517532 73517547 mRNA hsa-miR-302e TSEN54 miRanda miRanda
14034 chr16 31141397 31141397 1 + C T LUSC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTATTTTG < 41bp 1 0.384266697352763 1 0.975467324256897 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141397 synonymous SNV . 0 hm6A_associated_SNPs_50442 0 0 1 1 31141377 31141397 mRNA hsa-miR-128 MYST1 miRanda miRanda
14034 chr6 12122987 12122987 1 + G T LUSC 12122989 + 12122969 12123009 41 TACTGTTCTGAGTTACATGGACCAAAAACAAAGGTAGCCAT TACTGTTCTGAGTTACATTGACCAAAAACAAAGGTAGCCAT < 41bp 1 0.795671484451587 1 0.92476749420166 experiment 0.408657031096827 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 19 HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12122989 chr6:12122987 stopgain 0.967 0 hm6A_associated_SNPs_50454 0 0 1 2 12122973 12122994 mRNA hsa-miR-133a HIVEP1 miRanda miRanda
14034 chr6 12122987 12122987 1 + G T LUSC 12122989 + 12122969 12123009 41 TACTGTTCTGAGTTACATGGACCAAAAACAAAGGTAGCCAT TACTGTTCTGAGTTACATTGACCAAAAACAAAGGTAGCCAT < 41bp 1 0.795671484451587 1 0.92476749420166 experiment 0.408657031096827 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 19 HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12122989 chr6:12122987 stopgain 0.967 0 hm6A_associated_SNPs_50454 0 0 1 2 12122973 12122994 mRNA hsa-miR-133b HIVEP1 miRanda miRanda
14034 chr8 42015516 42015516 1 + G C LUSC 42015496 + 42015476 42015516 41 TTCAGAGCCAGTGATCAAAGACAATGTAGTTGTGGTTTATG TTCAGAGCCAGTGATCAAAGACAATGTAGTTGTGGTTTATC < 41bp 1 0.774165778688374 1 0.625386357307434 experiment 0.451668442623252 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 41 AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42015496 chr8:42015516 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_50489 0 0 1 1 42015504 42015523 mRNA hsa-miR-875-5p AP3M2 miRanda miRanda
14034 chr17 61661022 61661022 1 + G C LUSC 61661024 + 61661004 61661044 41 ACTGCTTCGCCTCTGCTGGAACAAGCAGGACCCTAACTACC ACTGCTTCGCCTCTGCTGCAACAAGCAGGACCCTAACTACC Direct Loss 1 0.754821189617427 1 0.990483403205872 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661024 chr17:61661022 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50512 0 0 1 2 61661020 61661046 mRNA hsa-miR-196a DCAF7 miRanda miRanda
14034 chr17 61661022 61661022 1 + G C LUSC 61661024 + 61661004 61661044 41 ACTGCTTCGCCTCTGCTGGAACAAGCAGGACCCTAACTACC ACTGCTTCGCCTCTGCTGCAACAAGCAGGACCCTAACTACC Direct Loss 1 0.754821189617427 1 0.990483403205872 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661024 chr17:61661022 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50512 0 0 1 2 61661020 61661046 mRNA hsa-miR-196b DCAF7 miRanda miRanda
14034 chr17 61661022 61661022 1 + G C LUSC 61661033 + 61661013 61661053 41 CCTCTGCTGGAACAAGCAGGACCCTAACTACCTGGCCACCA CCTCTGCTGCAACAAGCAGGACCCTAACTACCTGGCCACCA < 41bp 1 0.346775169083075 1 0.987254858016968 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661033 chr17:61661022 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50513 0 0 1 2 61661020 61661046 mRNA hsa-miR-196a DCAF7 miRanda miRanda
14034 chr17 61661022 61661022 1 + G C LUSC 61661033 + 61661013 61661053 41 CCTCTGCTGGAACAAGCAGGACCCTAACTACCTGGCCACCA CCTCTGCTGCAACAAGCAGGACCCTAACTACCTGGCCACCA < 41bp 1 0.346775169083075 1 0.987254858016968 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661033 chr17:61661022 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_50513 0 0 1 2 61661020 61661046 mRNA hsa-miR-196b DCAF7 miRanda miRanda
14034 chr11 65268285 65268285 1 + G T LUSC 65268275 + 65268255 65268295 41 CAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTT CAATATGTTGTTTTTCTGGAACTTACTTATTGTAACCTTTT < 41bp 1 0.0201472323878843 1 0.937548875808716 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268275 chr11:65268285 . . 0 hm6A_associated_SNPs_50516 0 0 1 1 65268269 65268292 lncRNA hsa-miR-409-5p MALAT1 miRanda starBase2
14034 chr11 65268285 65268285 1 + G T LUSC 65268289 + 65268269 65268309 41 TCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAAT TCTGGAACTTACTTATTGTAACCTTTTATTTATTTTCTAAT < 41bp 1 0.00603728315965456 1 0.728696465492249 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268289 chr11:65268285 . . 0 hm6A_associated_SNPs_50517 0 0 1 1 65268269 65268292 lncRNA hsa-miR-409-5p MALAT1 miRanda starBase2
14034 chr1 82456558 82456558 1 + C G LUSC 82456555 + 82456535 82456575 41 CCTACAGTCCCCCAACAGAGACTCTCTTTATACAAGCATGC CCTACAGTCCCCCAACAGAGACTGTCTTTATACAAGCATGC < 41bp 1 0.724722875918014 1 0.999848484992981 experiment 0.550554248163972 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 24 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456555 chr1:82456558 nonsynonymous SNV 0.890 4 hm6A_associated_SNPs_50523 0 0 1 1 82456549 82456567 mRNA hsa-miR-340 LPHN2 miRanda miRanda
14034 chr10 17277852 17277852 1 + C T LUSC 17277865 + 17277845 17277885 41 GATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTGAACCTGA GATTTCTTTGCCTCTTCCAAACTTTTCCTCCCTGAACCTGA < 41bp 1 0.544309409721955 1 0.12071818113327 experiment 0.91138118055609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 VIM ENSG00000026025 CDS Human protein_coding chr10:17277865 chr10:17277852 synonymous SNV . 0 hm6A_associated_SNPs_50531 0 0 1 1 17277845 17277853 mRNA hsa-miR-539 VIM miRanda miRanda
14034 chr11 121178012 121178012 1 + G A LUSC 121178031 + 121178011 121178051 41 AGACCACCATATGTTCTTTGACTATAATTATGGACAATATT AAACCACCATATGTTCTTTGACTATAATTATGGACAATATT < 41bp 1 0.717254186455409 1 0.479136228561401 experiment 0.565491627089181 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 SC5D ENSG00000109929 CDS Human protein_coding chr11:121178031 chr11:121178012 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_50540 0 0 1 1 121178009 121178030 mRNA hsa-miR-186 SC5DL miRanda miRanda
14034 chr1 169356393 169356393 1 + C T LUSC 169356405 + 169356385 169356425 41 TGCAATCACTGCCGGGGAGAACTGATTGCCCTTTAACAGTC TGCAATCATTGCCGGGGAGAACTGATTGCCCTTTAACAGTC < 41bp 1 0.673352312341287 1 0.186045676469803 experiment 0.653295375317426 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 9 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356405 chr1:169356393 synonymous SNV . 0 hm6A_associated_SNPs_50546 0 0 1 4 169356377 169356398 mRNA hsa-miR-34a BLZF1 miRanda miRanda
14034 chr1 169356393 169356393 1 + C T LUSC 169356405 + 169356385 169356425 41 TGCAATCACTGCCGGGGAGAACTGATTGCCCTTTAACAGTC TGCAATCATTGCCGGGGAGAACTGATTGCCCTTTAACAGTC < 41bp 1 0.673352312341287 1 0.186045676469803 experiment 0.653295375317426 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 9 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356405 chr1:169356393 synonymous SNV . 0 hm6A_associated_SNPs_50546 0 0 1 4 169356377 169356398 mRNA hsa-miR-34c-5p BLZF1 miRanda miRanda
14034 chr1 169356393 169356393 1 + C T LUSC 169356405 + 169356385 169356425 41 TGCAATCACTGCCGGGGAGAACTGATTGCCCTTTAACAGTC TGCAATCATTGCCGGGGAGAACTGATTGCCCTTTAACAGTC < 41bp 1 0.673352312341287 1 0.186045676469803 experiment 0.653295375317426 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 9 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356405 chr1:169356393 synonymous SNV . 0 hm6A_associated_SNPs_50546 0 0 1 4 169356379 169356398 mRNA hsa-miR-449a BLZF1 miRanda miRanda
14034 chr1 169356393 169356393 1 + C T LUSC 169356405 + 169356385 169356425 41 TGCAATCACTGCCGGGGAGAACTGATTGCCCTTTAACAGTC TGCAATCATTGCCGGGGAGAACTGATTGCCCTTTAACAGTC < 41bp 1 0.673352312341287 1 0.186045676469803 experiment 0.653295375317426 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 9 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356405 chr1:169356393 synonymous SNV . 0 hm6A_associated_SNPs_50546 0 0 1 4 169356379 169356398 mRNA hsa-miR-449b BLZF1 miRanda miRanda
14034 chr12 102590450 102590450 1 + G T LUSC 102590434 + 102590414 102590454 41 TGTGGACCAACAGGTATCAGACTTGCCAACAAGGTCGGTAG TGTGGACCAACAGGTATCAGACTTGCCAACAAGGTCTGTAG < 41bp 1 0.669872925550579 1 0.556551873683929 experiment 0.660254148898842 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 PMCH ENSG00000183395 CDS Human protein_coding chr12:102590434 chr12:102590450 synonymous SNV . 0 hm6A_associated_SNPs_50617 0 0 1 1 102590446 102590469 mRNA hsa-miR-299-3p C12orf48 miRanda miRanda
14034 chr14 79433705 79433705 1 + C G LUSC 79433688 + 79433668 79433708 41 CACTCATAGCCTGAAAGTGGACACCAAAGTGGTCACTCAGG CACTCATAGCCTGAAAGTGGACACCAAAGTGGTCACTGAGG < 41bp 1 0.162697198647066 1 0.954566955566406 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 38 NRXN3 ENSG00000021645 CDS Human protein_coding chr14:79433688 chr14:79433705 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_50664 0 0 0 2 79433703 79433725 mRNA hsa-miR-96 NRXN3 miRanda miRanda
14034 chr14 79433705 79433705 1 + C G LUSC 79433688 + 79433668 79433708 41 CACTCATAGCCTGAAAGTGGACACCAAAGTGGTCACTCAGG CACTCATAGCCTGAAAGTGGACACCAAAGTGGTCACTGAGG < 41bp 1 0.162697198647066 1 0.954566955566406 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 38 NRXN3 ENSG00000021645 CDS Human protein_coding chr14:79433688 chr14:79433705 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_50664 0 0 0 2 79433704 79433725 mRNA hsa-miR-1271 NRXN3 miRanda miRanda
14034 chr11 107959295 107959295 1 + T A LUSC 107959313 + 107959293 107959333 41 GCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC GCAGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC < 41bp 1 0.696326270858013 1 0.312370985746384 experiment 0.607347458283974 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959313 chr11:107959295 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_50728 0 0 1 4 107959294 107959314 mRNA hsa-miR-27a CUL5 miRanda miRanda
14034 chr11 107959295 107959295 1 + T A LUSC 107959313 + 107959293 107959333 41 GCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC GCAGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC < 41bp 1 0.696326270858013 1 0.312370985746384 experiment 0.607347458283974 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959313 chr11:107959295 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_50728 0 0 1 4 107959286 107959305 mRNA hsa-miR-182 CUL5 miRanda miRanda
14034 chr11 107959295 107959295 1 + T A LUSC 107959313 + 107959293 107959333 41 GCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC GCAGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC < 41bp 1 0.696326270858013 1 0.312370985746384 experiment 0.607347458283974 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959313 chr11:107959295 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_50728 0 0 1 4 107959294 107959314 mRNA hsa-miR-27b CUL5 miRanda miRanda
14034 chr11 107959295 107959295 1 + T A LUSC 107959313 + 107959293 107959333 41 GCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC GCAGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC < 41bp 1 0.696326270858013 1 0.312370985746384 experiment 0.607347458283974 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959313 chr11:107959295 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_50728 0 0 1 4 107959295 107959314 mRNA hsa-miR-1297 CUL5 miRanda miRanda
14034 chr8 110567087 110567087 1 + A T LUSC 110567073 + 110567053 110567093 41 TTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACAC TTTGGAACAACTGGAACCTGACTATTTTAAGGACTTGACAC < 41bp 1 0.500944503261818 1 0.801129698753357 experiment 0.998110993476364 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110567073 chr8:110567087 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_50754 0 0 1 1 110567076 110567096 mRNA hsa-miR-599 EBAG9 miRanda miRanda
14034 chr5 96100997 96100997 1 + G T LUSC 96100978 + 96100958 96100998 41 AAACTCTCTGACAGTCTAGGACAAAGGCAGCCTGACCCAGA AAACTCTCTGACAGTCTAGGACAAAGGCAGCCTGACCCATA < 41bp 1 0.759542810070483 1 0.945931553840637 experiment 0.480914379859034 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 40 CAST ENSG00000153113 CDS Human protein_coding chr5:96100978 chr5:96100997 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_50784 0 0 1 1 96100995 96101018 mRNA hsa-miR-136 CAST miRanda miRanda
14034 chr5 96100997 96100997 1 + G T LUSC 96101004 + 96100984 96101024 41 GCAGCCTGACCCAGATGAGAACAAACCAATGGAAGATAAAG GCAGCCTGACCCATATGAGAACAAACCAATGGAAGATAAAG < 41bp 1 0.532090588764368 1 0.916315734386444 experiment 0.935818822471265 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 CAST ENSG00000153113 CDS Human protein_coding chr5:96101004 chr5:96100997 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_50785 0 0 1 1 96100995 96101018 mRNA hsa-miR-136 CAST miRanda miRanda
14034 chr5 96100997 96100997 1 + G T LUSC 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCATATGAGAACAAACCAATGGAAGATAAAGTAAA < 41bp 1 0.161333719578163 1 0.797094464302063 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96100997 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_50786 0 0 1 1 96100995 96101018 mRNA hsa-miR-136 CAST miRanda miRanda
14034 chr14 95081357 95081357 1 + A T LUSC 95081340 + 95081320 95081360 41 ACGACTACGTGAAGAATGGAACTAGGGGGAAAATCACAGAT ACGACTACGTGAAGAATGGAACTAGGGGGAAAATCACTGAT < 41bp 1 0.45506233916226 1 0.998407602310181 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 38 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081340 chr14:95081357 synonymous SNV . 0 hm6A_associated_SNPs_50794 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr14 95081357 95081357 1 + A T LUSC 95081371 + 95081351 95081391 41 AATCACAGATCTGATCAAGGACCTTGACTCGCAGACAATGA AATCACTGATCTGATCAAGGACCTTGACTCGCAGACAATGA < 41bp 1 0.370980685539109 1 0.998207211494446 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 7 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081371 chr14:95081357 synonymous SNV . 0 hm6A_associated_SNPs_50795 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr14 95081357 95081357 1 + A T LUSC 95081377 + 95081357 95081397 41 AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC TGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC < 41bp 1 0.228113658001448 1 0.991060554981232 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 1 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081377 chr14:95081357 synonymous SNV . 0 hm6A_associated_SNPs_50796 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr10 1053023 1053023 1 + G T LUSC 1053032 + 1053012 1053052 41 GTGAATGAGGTGCTGAATAGACTGCACCTGGCTATCCCAAC GTGAATGAGGTTCTGAATAGACTGCACCTGGCTATCCCAAC < 41bp 1 0.421743466223242 1 0.960885524749756 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1053032 chr10:1053023 synonymous SNV . 0 hm6A_associated_SNPs_50841 0 0 1 1 1053016 1053042 mRNA hsa-miR-148a GTPBP4 miRanda miRanda
14034 chr3 148885004 148885004 1 + C G LUSC 148885009 + 148884989 148885029 41 ATTCCATATGCTAATCATGAACTGAAAGAAGAGAACCGGGT ATTCCATATGCTAATGATGAACTGAAAGAAGAGAACCGGGT < 41bp 1 0.138922784101397 1 0.824638426303864 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148885009 chr3:148885004 nonsynonymous SNV 0.962 2 hm6A_associated_SNPs_50857 0 0 1 1 148884988 148885009 mRNA hsa-miR-433 HPS3 miRanda miRanda
14034 chr2 232156089 232156089 1 + C T LUSC 232156076 + 232156056 232156096 41 ATACTTCTAGGGAATGGAAGACATCCTACGCTGCTTCATCA ATACTTCTAGGGAATGGAAGACATCCTACGCTGTTTCATCA < 41bp 1 0.332180488749455 1 0.521538615226746 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 ARMC9 ENSG00000135931 CDS Human protein_coding chr2:232156076 chr2:232156089 synonymous SNV . 0 hm6A_associated_SNPs_50874 0 0 0 1 232156067 232156091 mRNA hsa-miR-503 ARMC9 miRanda miRanda
14034 chrX 73044336 73044336 1 - C T LUSC 73044332 - 73044312 73044352 41 TTTGATTGCCTACTATGTGAACTCACTGTTAAAGGCACTGA TTTGATTGCCTACTATATGAACTCACTGTTAAAGGCACTGA < 41bp 1 0.624967842107356 1 0.579562604427338 experiment 0.750064315785288 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044332 chrX:73044336 . . 0 hm6A_associated_SNPs_50889 0 0 1 1 73044325 73044351 lncRNA hsa-miR-3174 XIST miRanda starBase2
14034 chr12 7080158 7080158 1 + T G LUSC 7080148 + 7080128 7080168 41 CGGTGGGGAGCAGGCACAGGACTGGGATGCTCTGCCACCCA CGGTGGGGAGCAGGCACAGGACTGGGATGCGCTGCCACCCA < 41bp 1 0.123371807374317 1 0.971090316772461 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 31 EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080148 chr12:7080158 synonymous SNV . 0 hm6A_associated_SNPs_50895 0 0 1 1 7080134 7080158 mRNA hsa-miR-324-5p EMG1 miRanda miRanda
14034 chr5 170395364 170395364 1 + C T LUSC 170395346 + 170395326 170395366 41 TCTTGGATCAGTTTCGTAAAACATATGTTGGTGATCAACTT TCTTGGATCAGTTTCGTAAAACATATGTTGGTGATCAATTT < 41bp 1 0.293071856645686 1 0.222419500350952 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 RANBP17 ENSG00000204764 CDS Human protein_coding chr5:170395346 chr5:170395364 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_50991 0 0 1 1 170395345 170395367 mRNA hsa-miR-382 RANBP17 miRanda miRanda
14034 chr8 98731283 98731283 1 + G A LUSC 98731278 + 98731258 98731298 41 AGGTTATTTTTCTCTATAGGACACAGAAGAATTAGAAAAAG AGGTTATTTTTCTCTATAGGACACAAAAGAATTAGAAAAAG < 41bp 1 0.472533177415429 1 0.00109708309173584 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 26 MTDH ENSG00000147649 CDS Human protein_coding chr8:98731278 chr8:98731283 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_50999 0 0 1 1 98731283 98731304 mRNA hsa-miR-216b MTDH miRanda miRanda
14034 chr12 107236590 107236590 1 + G C LUSC 107236591 + 107236571 107236611 41 TTTTATGGAGAAGAGAATAGACAAGGTAAGGCTGATAAAAT TTTTATGGAGAAGAGAATACACAAGGTAAGGCTGATAAAAT Direct Loss 1 0.458662282155548 1 0.70045393705368 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 RIC8B ENSG00000111785 CDS Human protein_coding chr12:107236591 chr12:107236590 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_51004 0 0 1 1 107236576 107236595 mRNA hsa-miR-211 RIC8B miRanda miRanda
14034 chr16 21973818 21973818 1 + G C LUSC 21973801 + 21973781 21973821 41 TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGGAAT TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGCAAT < 41bp 1 0.69286428150158 1 0.379234790802002 experiment 0.61427143699684 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21973801 chr16:21973818 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_51035 0 0 1 2 21973801 21973828 mRNA hsa-miR-103 UQCRC2 miRanda miRanda
14034 chr16 21973818 21973818 1 + G C LUSC 21973801 + 21973781 21973821 41 TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGGAAT TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGCAAT < 41bp 1 0.69286428150158 1 0.379234790802002 experiment 0.61427143699684 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21973801 chr16:21973818 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_51035 0 0 1 2 21973801 21973828 mRNA hsa-miR-107 UQCRC2 miRanda miRanda
14034 chr17 37884226 37884226 1 + C T LUSC 37884206 + 37884186 37884226 41 CCTCTATTACTGGGACCAGGACCCACCAGAGCGGGGGGCTC CCTCTATTACTGGGACCAGGACCCACCAGAGCGGGGGGCTT < 41bp 1 0.796741390371435 1 0.993493676185608 experiment 0.406517219257129 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37884206 chr17:37884226 nonsynonymous SNV 0.872 0 hm6A_associated_SNPs_51080 0 0 1 2 37884220 37884240 mRNA hsa-miR-18a ERBB2 miRanda miRanda
14034 chr17 37884226 37884226 1 + C T LUSC 37884206 + 37884186 37884226 41 CCTCTATTACTGGGACCAGGACCCACCAGAGCGGGGGGCTC CCTCTATTACTGGGACCAGGACCCACCAGAGCGGGGGGCTT < 41bp 1 0.796741390371435 1 0.993493676185608 experiment 0.406517219257129 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37884206 chr17:37884226 nonsynonymous SNV 0.872 0 hm6A_associated_SNPs_51080 0 0 1 2 37884220 37884240 mRNA hsa-miR-18b ERBB2 miRanda miRanda
14034 chr11 65268757 65268757 1 + A T LUSC 65268776 + 65268756 65268796 41 TAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAAC TTGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAAC < 41bp 1 0.346675725994767 1 0.827158749103546 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268776 chr11:65268757 . . 0 hm6A_associated_SNPs_51097 0 0 1 3 65268755 65268777 lncRNA hsa-miR-579-3p MALAT1 miRanda starBase2
14034 chr11 65268757 65268757 1 + A T LUSC 65268776 + 65268756 65268796 41 TAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAAC TTGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAAC < 41bp 1 0.346675725994767 1 0.827158749103546 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268776 chr11:65268757 . . 0 hm6A_associated_SNPs_51097 0 0 1 3 65268756 65268777 lncRNA hsa-miR-664b-3p MALAT1 miRanda starBase2
14034 chr11 65268757 65268757 1 + A T LUSC 65268776 + 65268756 65268796 41 TAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAAC TTGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAAC < 41bp 1 0.346675725994767 1 0.827158749103546 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268776 chr11:65268757 . . 0 hm6A_associated_SNPs_51097 0 0 1 3 65268744 65268767 lncRNA hsa-miR-651-5p MALAT1 miRanda starBase2
14034 chr9 139310803 139310803 1 + G A LUSC 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCAGCCTGACC < 41bp 1 0.636768942386895 1 0.960583925247192 experiment 0.72646211522621 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310803 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_51128 0 0 1 2 139310797 139310817 mRNA hsa-miR-330-5p PMPCA miRanda miRanda
14034 chr9 139310803 139310803 1 + G A LUSC 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCAGCCTGACC < 41bp 1 0.636768942386895 1 0.960583925247192 experiment 0.72646211522621 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310803 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_51128 0 0 1 2 139310798 139310817 mRNA hsa-miR-326 PMPCA miRanda miRanda
14034 chr9 139310803 139310803 1 + G A LUSC 139310797 + 139310777 139310817 41 GTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC GTTTGAGCTGGAGGACCTGAACCTGCAGCCTGACCCAGAGC < 41bp 1 0.574927750307202 1 0.959132015705109 experiment 0.850144499385596 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310797 chr9:139310803 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_51129 0 0 1 2 139310797 139310817 mRNA hsa-miR-330-5p PMPCA miRanda miRanda
14034 chr9 139310803 139310803 1 + G A LUSC 139310797 + 139310777 139310817 41 GTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC GTTTGAGCTGGAGGACCTGAACCTGCAGCCTGACCCAGAGC < 41bp 1 0.574927750307202 1 0.959132015705109 experiment 0.850144499385596 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310797 chr9:139310803 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_51129 0 0 1 2 139310798 139310817 mRNA hsa-miR-326 PMPCA miRanda miRanda
14034 chr7 98955978 98955978 1 + G C LUSC 98955979 + 98955959 98955999 41 TCAGGGTCTCGACTCTGAAGACAGAGTTCCTGCCGCTCCTA TCAGGGTCTCGACTCTGAACACAGAGTTCCTGCCGCTCCTA Direct Loss 1 0.71912616237525 1 0.0423907339572906 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;Control 20 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98955979 chr7:98955978 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_51137 0 0 1 1 98955970 98955991 mRNA hsa-miR-873 ARPC1A miRanda miRanda
14034 chr17 48458295 48458295 1 + G C LUSC 48458296 + 48458276 48458316 41 TCTCTCTTTAGATAGTGCTGACTGATTCTAGCCCTCAGGGA TCTCTCTTTAGATAGTGCTCACTGATTCTAGCCCTCAGGGA Direct Loss 1 0.593339598622982 1 0.856586456298828 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 EME1 ENSG00000154920 CDS Human protein_coding chr17:48458296 chr17:48458295 nonsynonymous SNV 0.350 3 hm6A_associated_SNPs_51143 0 0 0 2 48458295 48458316 mRNA hsa-miR-125b EME1 miRanda miRanda
14034 chr17 48458295 48458295 1 + G C LUSC 48458296 + 48458276 48458316 41 TCTCTCTTTAGATAGTGCTGACTGATTCTAGCCCTCAGGGA TCTCTCTTTAGATAGTGCTCACTGATTCTAGCCCTCAGGGA Direct Loss 1 0.593339598622982 1 0.856586456298828 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 EME1 ENSG00000154920 CDS Human protein_coding chr17:48458296 chr17:48458295 nonsynonymous SNV 0.350 3 hm6A_associated_SNPs_51143 0 0 0 2 48458294 48458316 mRNA hsa-miR-125a-5p EME1 miRanda miRanda
14034 chr17 76212846 76212846 1 + G A LUSC 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAAAGCCAA < 41bp 1 0.188713623984802 1 0.258325070142746 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212846 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_51152 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212846 76212846 1 + G A LUSC 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAAAGCCAA < 41bp 1 0.188713623984802 1 0.258325070142746 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212846 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_51152 0 0 1 2 76212840 76212859 mRNA hsa-miR-375 BIRC5 miRanda miRanda
14034 chr17 76212846 76212846 1 + G A LUSC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAAAAAGCCAAGAACA < 41bp 1 0.594452475123925 1 0.493940889835358 experiment 0.81109504975215 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212846 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_51153 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212846 76212846 1 + G A LUSC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAAAAAGCCAAGAACA < 41bp 1 0.594452475123925 1 0.493940889835358 experiment 0.81109504975215 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212846 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_51153 0 0 1 2 76212840 76212859 mRNA hsa-miR-375 BIRC5 miRanda miRanda
14034 chr17 59469369 59469369 1 + G A LUSC 59469374 + 59469354 59469394 41 AAGCATCGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCG AAGCATCGAGACTCTAAGTAACAGCTCAGGCTCCACCAGCG < 41bp 1 0.695974071230752 1 0.986489415168762 experiment 0.608051857538497 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59469374 chr17:59469369 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51155 0 0 0 1 59469352 59469374 mRNA hsa-miR-361-5p BCAS3 miRanda miRanda
14034 chr17 57262807 57262807 1 + G C LUSC 57262820 + 57262800 57262840 41 GAGTTTAGAAGTATTGAAAGACACCATCTTTCCATCTCGTA GAGTTTACAAGTATTGAAAGACACCATCTTTCCATCTCGTA < 41bp 1 0.574700816788612 1 0.0253958106040955 experiment 0.850598366422775 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262820 chr17:57262807 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_51161 0 0 1 1 57262804 57262825 mRNA hsa-miR-187 PRR11 miRanda miRanda
14034 chr2 85875905 85875905 1 + G A LUSC 85875911 + 85875891 85875931 41 AGAGGCGAGATAATGATGAAACCAACCAGCAGGGGGCTTGA AGAGGCGAGATAATAATGAAACCAACCAGCAGGGGGCTTGA < 41bp 1 0.514244884231631 1 0.285817503929138 experiment 0.971510231536739 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 USP39 ENSG00000168883 CDS Human protein_coding chr2:85875911 chr2:85875905 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_51168 0 0 1 1 85875904 85875924 mRNA hsa-miR-370 USP39 miRanda miRanda
14034 chrX 103220133 103220133 1 + G C LUSC 103220141 + 103220121 103220161 41 AGGAGAAAGAGTGTGTTCAAACATCATAAAATGGGGATCTC AGGAGAAAGAGTCTGTTCAAACATCATAAAATGGGGATCTC < 41bp 1 0.662477757273672 1 0.0196733772754669 experiment 0.675044485452656 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 13 TMSB15B ENSG00000158427 CDS Human protein_coding chrX:103220141 chrX:103220133 nonsynonymous SNV 0.019 0 hm6A_associated_SNPs_51177 0 0 0 1 103220122 103220144 mRNA hsa-miR-653 TMSB15B miRanda miRanda
14034 chr1 63877676 63877676 1 + G T LUSC 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTCTTTACAGAAAGGTAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.541752670233027 1 0.00485405325889587 experiment 0.916494659533946 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877676 stopgain 0.969 0 hm6A_associated_SNPs_51183 0 0 0 2 63877657 63877678 mRNA hsa-miR-204 ALG6 miRanda miRanda
14034 chr1 63877676 63877676 1 + G T LUSC 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTCTTTACAGAAAGGTAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.541752670233027 1 0.00485405325889587 experiment 0.916494659533946 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877676 stopgain 0.969 0 hm6A_associated_SNPs_51183 0 0 0 2 63877657 63877678 mRNA hsa-miR-211 ALG6 miRanda miRanda
14034 chrX 73046345 73046345 1 - T A LUSC 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTTTTATGCCTGGGCCAG < 41bp 1 0.461211784279121 1 0.923597812652588 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046345 . . 0 hm6A_associated_SNPs_51206 0 0 1 6 73046328 73046351 lncRNA hsa-miR-193a-3p XIST miRanda starBase2
14034 chrX 73046345 73046345 1 - T A LUSC 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTTTTATGCCTGGGCCAG < 41bp 1 0.461211784279121 1 0.923597812652588 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046345 . . 0 hm6A_associated_SNPs_51206 0 0 1 6 73046328 73046351 lncRNA hsa-miR-193b-3p XIST miRanda starBase2
14034 chrX 73046345 73046345 1 - T A LUSC 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTTTTATGCCTGGGCCAG < 41bp 1 0.461211784279121 1 0.923597812652588 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046345 . . 0 hm6A_associated_SNPs_51206 0 0 1 6 73046342 73046364 lncRNA hsa-miR-200b-3p XIST miRanda starBase2
14034 chrX 73046345 73046345 1 - T A LUSC 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTTTTATGCCTGGGCCAG < 41bp 1 0.461211784279121 1 0.923597812652588 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046345 . . 0 hm6A_associated_SNPs_51206 0 0 1 6 73046342 73046365 lncRNA hsa-miR-200c-3p XIST miRanda starBase2
14034 chrX 73046345 73046345 1 - T A LUSC 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTTTTATGCCTGGGCCAG < 41bp 1 0.461211784279121 1 0.923597812652588 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046345 . . 0 hm6A_associated_SNPs_51206 0 0 1 6 73046342 73046363 lncRNA hsa-miR-429 XIST miRanda starBase2
14034 chrX 73046345 73046345 1 - T A LUSC 73046350 - 73046330 73046370 41 TGCCGGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAG TGCCGGTTACCTTTAGATTGACAGTTTTATGCCTGGGCCAG < 41bp 1 0.461211784279121 1 0.923597812652588 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046350 chrX:73046345 . . 0 hm6A_associated_SNPs_51206 0 0 1 6 73046340 73046358 lncRNA hsa-miR-369-3p XIST miRanda starBase2
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398479 398499 mRNA hsa-let-7a RBCK1 miRanda miRanda
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398479 398499 mRNA hsa-let-7b RBCK1 miRanda miRanda
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398479 398499 mRNA hsa-let-7c RBCK1 miRanda miRanda
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398478 398499 mRNA hsa-let-7d RBCK1 miRanda miRanda
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398479 398499 mRNA hsa-let-7e RBCK1 miRanda miRanda
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398479 398499 mRNA hsa-miR-98 RBCK1 miRanda miRanda
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398477 398499 mRNA hsa-let-7g RBCK1 miRanda miRanda
14034 chr20 398484 398484 1 + G T LUSC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTGC Direct Loss 1 0.59416364522477 1 0.583604872226715 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398484 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_51209 0 0 0 8 398479 398499 mRNA hsa-let-7i RBCK1 miRanda miRanda
14034 chr10 27459721 27459721 1 + A G LUSC 27459719 + 27459699 27459739 41 TTGAAGATCCACTTATTGTAACACCAGATTGCCAAGAAAAG TTGAAGATCCACTTATTGTAACGCCAGATTGCCAAGAAAAG Direct Loss 1 0.647839321940575 1 0.972871840000153 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 23 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459719 chr10:27459721 synonymous SNV . 0 hm6A_associated_SNPs_51219 0 0 1 1 27459709 27459734 mRNA hsa-miR-182 MASTL miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTTACACTGG < 41bp 1 0.485009898098878 1 0.990080833435059 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51245 0 0 1 4 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTTACACTGG < 41bp 1 0.485009898098878 1 0.990080833435059 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51245 0 0 1 4 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTTACACTGG < 41bp 1 0.485009898098878 1 0.990080833435059 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51245 0 0 1 4 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453153 + 9453133 9453173 41 GATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGG GATTCATCAGGTCTTATAAAACACAGGCGAACTTACACTGG < 41bp 1 0.485009898098878 1 0.990080833435059 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453153 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51245 0 0 1 4 9453165 9453193 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTTACACTGGAGAAAAGCCT < 41bp 1 0.574024831884387 1 0.990628302097321 experiment 0.851950336231225 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51246 0 0 1 4 9453153 9453174 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTTACACTGGAGAAAAGCCT < 41bp 1 0.574024831884387 1 0.990628302097321 experiment 0.851950336231225 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51246 0 0 1 4 9453153 9453174 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTTACACTGGAGAAAAGCCT < 41bp 1 0.574024831884387 1 0.990628302097321 experiment 0.851950336231225 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51246 0 0 1 4 9453150 9453173 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453166 9453166 1 + C T LUSC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTTACACTGGAGAAAAGCCT < 41bp 1 0.574024831884387 1 0.990628302097321 experiment 0.851950336231225 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453166 nonsynonymous SNV 0.577 3 hm6A_associated_SNPs_51246 0 0 1 4 9453165 9453193 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr1 47838719 47838719 1 + C G LUSC 47838718 + 47838698 47838738 41 AGACAACCTTCAAGGATGGAACAAGACCATGGATGGGAAGG AGACAACCTTCAAGGATGGAAGAAGACCATGGATGGGAAGG Direct Loss 1 0.785849012331357 1 0.973183810710907 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 22 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838718 chr1:47838719 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_51426 0 0 1 2 47838705 47838728 mRNA hsa-miR-135a CMPK1 miRanda miRanda
14034 chr1 47838719 47838719 1 + C G LUSC 47838718 + 47838698 47838738 41 AGACAACCTTCAAGGATGGAACAAGACCATGGATGGGAAGG AGACAACCTTCAAGGATGGAAGAAGACCATGGATGGGAAGG Direct Loss 1 0.785849012331357 1 0.973183810710907 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 22 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838718 chr1:47838719 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_51426 0 0 1 2 47838705 47838728 mRNA hsa-miR-135b CMPK1 miRanda miRanda
14034 chr5 70856009 70856009 1 + C G LUSC 70855997 + 70855977 70856017 41 TGTCTGATAAGGAAGAAAGAACTGATGCTGCTCCTAAGTCT TGTCTGATAAGGAAGAAAGAACTGATGCTGCTGCTAAGTCT < 41bp 1 0.524599035645918 1 0.995609283447266 experiment 0.950801928708163 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70855997 chr5:70856009 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_51429 0 0 1 2 70856000 70856021 mRNA hsa-miR-378 BDP1 miRanda miRanda
14034 chr5 70856009 70856009 1 + C G LUSC 70855997 + 70855977 70856017 41 TGTCTGATAAGGAAGAAAGAACTGATGCTGCTCCTAAGTCT TGTCTGATAAGGAAGAAAGAACTGATGCTGCTGCTAAGTCT < 41bp 1 0.524599035645918 1 0.995609283447266 experiment 0.950801928708163 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70855997 chr5:70856009 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_51429 0 0 1 2 70855999 70856021 mRNA hsa-miR-422a BDP1 miRanda miRanda
14034 chr17 57262819 57262819 1 + G C LUSC 57262820 + 57262800 57262840 41 GAGTTTAGAAGTATTGAAAGACACCATCTTTCCATCTCGTA GAGTTTAGAAGTATTGAAACACACCATCTTTCCATCTCGTA Direct Loss 1 0.547687076404022 1 0.0120065212249756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262820 chr17:57262819 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_51434 0 0 1 2 57262804 57262825 mRNA hsa-miR-187 PRR11 miRanda miRanda
14034 chr17 57262819 57262819 1 + G C LUSC 57262820 + 57262800 57262840 41 GAGTTTAGAAGTATTGAAAGACACCATCTTTCCATCTCGTA GAGTTTAGAAGTATTGAAACACACCATCTTTCCATCTCGTA Direct Loss 1 0.547687076404022 1 0.0120065212249756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262820 chr17:57262819 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_51434 0 0 1 2 57262818 57262838 mRNA hsa-miR-143 PRR11 miRanda miRanda
14034 chr3 57545540 57545540 1 + C A LUSC 57545539 + 57545519 57545559 41 CTGAAAAGTGCTTGTGGTGAACCTGCTTACACAAATTATGT CTGAAAAGTGCTTGTGGTGAAACTGCTTACACAAATTATGT Direct Loss 1 0.613135224459191 1 0.838478446006775 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 PDE12 ENSG00000174840 CDS Human protein_coding chr3:57545539 chr3:57545540 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51439 0 0 1 1 57545530 57545553 mRNA hsa-miR-599 PDE12 miRanda miRanda
14034 chr14 75302033 75302033 1 + C T LUSC 75302036 + 75302016 75302056 41 GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGAT GCCATAGGTTTTGTGGTTGGACAGACTGATTGGGAGAAGAT < 41bp 1 0.643540479812914 1 0.442231446504593 experiment 0.712919040374171 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75302036 chr14:75302033 synonymous SNV . 0 hm6A_associated_SNPs_51473 0 0 1 1 75302029 75302052 mRNA hsa-miR-150 YLPM1 miRanda miRanda
14034 chr5 7875449 7875449 1 + G A LUSC 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CAGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.741315862369871 1 0.755499601364136 experiment 0.517368275260259 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875449 nonsynonymous SNV 0.654 0 hm6A_associated_SNPs_51486 0 0 1 4 7875444 7875468 mRNA hsa-miR-199a-5p MTRR miRanda miRanda
14034 chr5 7875449 7875449 1 + G A LUSC 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CAGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.741315862369871 1 0.755499601364136 experiment 0.517368275260259 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875449 nonsynonymous SNV 0.654 0 hm6A_associated_SNPs_51486 0 0 1 4 7875445 7875468 mRNA hsa-miR-199b-5p MTRR miRanda miRanda
14034 chr5 7875449 7875449 1 + G A LUSC 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CAGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.741315862369871 1 0.755499601364136 experiment 0.517368275260259 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875449 nonsynonymous SNV 0.654 0 hm6A_associated_SNPs_51486 0 0 1 4 7875442 7875462 mRNA hsa-miR-376a MTRR miRanda miRanda
14034 chr5 7875449 7875449 1 + G A LUSC 7875468 + 7875448 7875488 41 CGGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG CAGCATTTCTATGACACTGGACATGCAGATGACTGTGTAGG < 41bp 1 0.741315862369871 1 0.755499601364136 experiment 0.517368275260259 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 MTRR ENSG00000124275 CDS Human protein_coding chr5:7875468 chr5:7875449 nonsynonymous SNV 0.654 0 hm6A_associated_SNPs_51486 0 0 1 4 7875441 7875462 mRNA hsa-miR-376b MTRR miRanda miRanda
14034 chr11 65273295 65273295 1 + A G LUSC 65273279 + 65273259 65273299 41 AGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAAC AGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAGTAAC < 41bp 1 0.0581544309683154 1 0.675582826137543 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;Control 37 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273279 chr11:65273295 . . 0 hm6A_associated_SNPs_51565 0 0 1 1 65273294 65273316 lncRNA hsa-miR-582-5p MALAT1 miRanda starBase2
14034 chr11 65273295 65273295 1 + A G LUSC 65273298 + 65273278 65273318 41 AACCAGTAAGTGGAGAAATAACATGTTCAAGAACTGTAATG AACCAGTAAGTGGAGAAGTAACATGTTCAAGAACTGTAATG < 41bp 1 0.523520518971756 1 0.824673652648926 experiment 0.952958962056488 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273298 chr11:65273295 . . 0 hm6A_associated_SNPs_51566 0 0 1 1 65273294 65273316 lncRNA hsa-miR-582-5p MALAT1 miRanda starBase2
14034 chr11 65273295 65273295 1 + A G LUSC 65273310 + 65273290 65273330 41 GAGAAATAACATGTTCAAGAACTGTAATGCTGGGTGGGAAC GAGAAGTAACATGTTCAAGAACTGTAATGCTGGGTGGGAAC < 41bp 1 0.577553861847572 1 0.944934368133545 experiment 0.844892276304857 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 6 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273310 chr11:65273295 . . 0 hm6A_associated_SNPs_51567 0 0 1 1 65273294 65273316 lncRNA hsa-miR-582-5p MALAT1 miRanda starBase2
14034 chr14 72926370 72926370 1 + G A LUSC 72926380 + 72926360 72926400 41 GAACTGCTGGGAACCTGAAAACACTGACTATGGTGAGAACT GAACTGCTGGAAACCTGAAAACACTGACTATGGTGAGAACT < 41bp 1 0.128470061277098 1 0.598982930183411 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 RGS6 ENSG00000182732 CDS Human protein_coding chr14:72926380 chr14:72926370 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51568 0 0 0 1 72926366 72926388 mRNA hsa-miR-223 RGS6 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320499 48320521 mRNA hsa-miR-17 KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320499 48320521 mRNA hsa-miR-20a KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320499 48320521 mRNA hsa-miR-93 KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320499 48320521 mRNA hsa-miR-106a KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320499 48320519 mRNA hsa-miR-187 KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320493 48320513 mRNA hsa-miR-9 KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320501 48320521 mRNA hsa-miR-106b KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320499 48320521 mRNA hsa-miR-20b KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320505 48320523 mRNA hsa-miR-488 KIAA0146 miRanda miRanda
14034 chr8 48320509 48320509 1 + A G LUSC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCG < 41bp 1 0.301428365347774 1 0.0515925884246826 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320509 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51606 0 0 1 10 48320500 48320521 mRNA hsa-miR-519d KIAA0146 miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331176 88331197 mRNA hsa-let-7a ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331176 88331197 mRNA hsa-let-7b ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331176 88331197 mRNA hsa-let-7c ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331176 88331197 mRNA hsa-let-7d ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331176 88331197 mRNA hsa-let-7e ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331156 88331176 mRNA hsa-miR-23a ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331176 88331197 mRNA hsa-miR-98 ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331156 88331176 mRNA hsa-miR-23b ORC3L miRanda miRanda
14034 chr6 88331176 88331176 1 + A G LUSC 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAGAACATCCGACGTCTACCATCTT < 41bp 1 0.601968475890213 1 0.426836311817169 experiment 0.796063048219574 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 19 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331176 synonymous SNV . 0 hm6A_associated_SNPs_51613 0 0 1 9 88331174 88331194 mRNA hsa-miR-379 ORC3L miRanda miRanda
14034 chr4 54310229 54310229 1 + G T LUSC 54310218 + 54310198 54310238 41 ATCTTTTTCTTCAACAGTGGACATTCCTCTGGTTATGATAG ATCTTTTTCTTCAACAGTGGACATTCCTCTGTTTATGATAG < 41bp 1 0.369090873431918 1 0.632660150527954 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 32 FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54310218 chr4:54310229 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_51660 0 0 1 1 54310226 54310250 mRNA hsa-miR-19a FIP1L1 miRanda miRanda
14034 chr19 18278049 18278049 1 + G C LUSC 18278062 + 18278042 18278082 41 AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA AGAGATCCACAAGCGCATGAACAGCCTCAAGCCGGACCTCA < 41bp 1 0.702318984383843 1 0.946017146110535 experiment 0.595362031232315 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18278062 chr19:18278049 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_51666 1 0 1 3 18278036 18278060 mRNA hsa-miR-135a PIK3R2 miRanda miRanda
14034 chr19 18278049 18278049 1 + G C LUSC 18278062 + 18278042 18278082 41 AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA AGAGATCCACAAGCGCATGAACAGCCTCAAGCCGGACCTCA < 41bp 1 0.702318984383843 1 0.946017146110535 experiment 0.595362031232315 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18278062 chr19:18278049 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_51666 1 0 1 3 18278036 18278060 mRNA hsa-miR-135b PIK3R2 miRanda miRanda
14034 chr19 18278049 18278049 1 + G C LUSC 18278062 + 18278042 18278082 41 AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA AGAGATCCACAAGCGCATGAACAGCCTCAAGCCGGACCTCA < 41bp 1 0.702318984383843 1 0.946017146110535 experiment 0.595362031232315 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18278062 chr19:18278049 nonsynonymous SNV 0.979 4 hm6A_associated_SNPs_51666 1 0 1 3 18278049 18278070 mRNA hsa-miR-485-5p PIK3R2 miRanda miRanda
14034 chr15 25327969 25327969 1 + G A LUSC 25327958 + 25327938 25327978 41 TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTAAAAACTCTA < 41bp 1 0.0795596228091879 1 0.218974262475967 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 SNORD116-16 ENSG00000207263 ncRNA_exonic Human snoRNA chr15:25327958 chr15:25327969 . . 0 hm6A_associated_SNPs_51670 0 0 0 1 25327966 25327986 mRNA hsa-miR-202 SNORD116-16 miRanda miRanda
14034 chr15 25219558 25219558 1 + T G LUSC 25219575 + 25219555 25219595 41 GCATCAAGTTTTAACTGTGGACATTGGATTTGGTGGAACAG GCAGCAAGTTTTAACTGTGGACATTGGATTTGGTGGAACAG < 41bp 1 0.337936157238319 1 0.731152057647705 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 SNHG14 ENSG00000128739;ENSG00000273173 UTR5;UTR3 Human other chr15:25219575 chr15:25219558 . . 0 hm6A_associated_SNPs_51672 0 0 1 2 25219556 25219575 mRNA hsa-miR-27a SNURF miRanda miRanda
14034 chr15 25219558 25219558 1 + T G LUSC 25219575 + 25219555 25219595 41 GCATCAAGTTTTAACTGTGGACATTGGATTTGGTGGAACAG GCAGCAAGTTTTAACTGTGGACATTGGATTTGGTGGAACAG < 41bp 1 0.337936157238319 1 0.731152057647705 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 SNHG14 ENSG00000128739;ENSG00000273173 UTR5;UTR3 Human other chr15:25219575 chr15:25219558 . . 0 hm6A_associated_SNPs_51672 0 0 1 2 25219556 25219575 mRNA hsa-miR-27b SNURF miRanda miRanda
14034 chr10 21959505 21959505 1 + C G LUSC 21959510 + 21959490 21959530 41 GTGGAAAAGATGTTTCAGAGACTAGAGGGTCAGAGGGCAAA GTGGAAAAGATGTTTGAGAGACTAGAGGGTCAGAGGGCAAA < 41bp 1 0.460741903208902 1 0.97066593170166 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 MLLT10 ENSG00000078403 CDS Human protein_coding chr10:21959510 chr10:21959505 stopgain 1.000 0 hm6A_associated_SNPs_51691 0 0 1 1 21959485 21959506 mRNA hsa-miR-494 MLLT10 miRanda miRanda
14034 chr6 151355694 151355694 1 + C T LUSC 151355691 + 151355671 151355711 41 TATGGAGCCAAAGATATTGAACTCTCTCCTGAGGCACAAGC TATGGAGCCAAAGATATTGAACTTTCTCCTGAGGCACAAGC < 41bp 1 0.236271217900262 1 0.917490482330322 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151355691 chr6:151355694 synonymous SNV . 0 hm6A_associated_SNPs_51710 0 0 1 1 151355680 151355700 mRNA hsa-miR-185 MTHFD1L miRanda miRanda
14034 chr1 10328223 10328223 1 + A G LUSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTGCAAACATGAATGAAACAAGTAGCCGTTCCCACGCT < 41bp 1 0.51327300491449 1 0.0296856462955475 experiment 0.97345399017102 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328223 nonsynonymous SNV 0.976 4 hm6A_associated_SNPs_51715 0 0 1 1 10328210 10328223 mRNA hsa-miR-22 KIF1B miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACATGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.372569786318775 1 0.979342460632324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51740 0 0 0 7 115544423 115544444 mRNA hsa-miR-15a UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACATGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.372569786318775 1 0.979342460632324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51740 0 0 0 7 115544422 115544444 mRNA hsa-miR-16 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACATGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.372569786318775 1 0.979342460632324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51740 0 0 0 7 115544422 115544442 mRNA hsa-miR-214 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACATGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.372569786318775 1 0.979342460632324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51740 0 0 0 7 115544423 115544444 mRNA hsa-miR-15b UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACATGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.372569786318775 1 0.979342460632324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51740 0 0 0 7 115544423 115544444 mRNA hsa-miR-195 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACATGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.372569786318775 1 0.979342460632324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51740 0 0 0 7 115544423 115544444 mRNA hsa-miR-424 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGACATGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.372569786318775 1 0.979342460632324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_51740 0 0 0 7 115544424 115544444 mRNA hsa-miR-497 UGT8 miRanda miRanda
14034 chr13 73369612 73369612 1 + C T LUSC 73369627 + 73369607 73369647 41 ACCTGCGTGACTTTGAGTTGACAGAAGAGCAATATATTAAA ACCTGTGTGACTTTGAGTTGACAGAAGAGCAATATATTAAA < 41bp 1 0.292232847896182 1 0.434689730405807 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 6 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73369627 chr13:73369612 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_51748 0 0 1 1 73369601 73369620 mRNA hsa-miR-224 PIBF1 miRanda miRanda
14034 chr21 46596499 46596499 1 + G A LUSC 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCCACCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.705088053452002 1 0.976985692977905 experiment 0.589823893095996 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596499 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_51821 0 0 1 5 46596497 46596518 mRNA hsa-miR-130a ADARB1 miRanda miRanda
14034 chr21 46596499 46596499 1 + G A LUSC 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCCACCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.705088053452002 1 0.976985692977905 experiment 0.589823893095996 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596499 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_51821 0 0 1 5 46596494 46596518 mRNA hsa-miR-301a ADARB1 miRanda miRanda
14034 chr21 46596499 46596499 1 + G A LUSC 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCCACCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.705088053452002 1 0.976985692977905 experiment 0.589823893095996 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596499 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_51821 0 0 1 5 46596497 46596518 mRNA hsa-miR-130b ADARB1 miRanda miRanda
14034 chr21 46596499 46596499 1 + G A LUSC 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCCACCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.705088053452002 1 0.976985692977905 experiment 0.589823893095996 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596499 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_51821 0 0 1 5 46596497 46596518 mRNA hsa-miR-454 ADARB1 miRanda miRanda
14034 chr21 46596499 46596499 1 + G A LUSC 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGGCCACCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.705088053452002 1 0.976985692977905 experiment 0.589823893095996 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596499 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_51821 0 0 1 5 46596494 46596518 mRNA hsa-miR-301b ADARB1 miRanda miRanda
14034 chr14 76642992 76642992 1 + T A LUSC 76642979 + 76642959 76642999 41 TTTTTAGGAGACCAGCATAAACACTTTGGGGACTGAGAGGA TTTTTAGGAGACCAGCATAAACACTTTGGGGACAGAGAGGA < 41bp 1 0.796070832565562 1 0.830405712127686 experiment 0.407858334868876 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76642979 chr14:76642992 synonymous SNV . 0 hm6A_associated_SNPs_51832 0 0 1 2 76642988 76643008 mRNA hsa-miR-135a C14orf118 miRanda miRanda
14034 chr14 76642992 76642992 1 + T A LUSC 76642979 + 76642959 76642999 41 TTTTTAGGAGACCAGCATAAACACTTTGGGGACTGAGAGGA TTTTTAGGAGACCAGCATAAACACTTTGGGGACAGAGAGGA < 41bp 1 0.796070832565562 1 0.830405712127686 experiment 0.407858334868876 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76642979 chr14:76642992 synonymous SNV . 0 hm6A_associated_SNPs_51832 0 0 1 2 76642988 76643008 mRNA hsa-miR-135b C14orf118 miRanda miRanda
14034 chrX 54559016 54559016 1 + A G LUSC 54559014 + 54558994 54559034 41 GTCATCATGATGAAACTTAGACACAGTGAGTTTCCTTTACC GTCATCATGATGAAACTTAGACGCAGTGAGTTTCCTTTACC Direct Loss 1 0.154825027178556 1 0.00479245185852051 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 GNL3L ENSG00000130119 CDS Human protein_coding chrX:54559014 chrX:54559016 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51837 0 0 0 2 54558999 54559018 mRNA hsa-miR-187 GNL3L miRanda miRanda
14034 chrX 54559016 54559016 1 + A G LUSC 54559014 + 54558994 54559034 41 GTCATCATGATGAAACTTAGACACAGTGAGTTTCCTTTACC GTCATCATGATGAAACTTAGACGCAGTGAGTTTCCTTTACC Direct Loss 1 0.154825027178556 1 0.00479245185852051 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 23 GNL3L ENSG00000130119 CDS Human protein_coding chrX:54559014 chrX:54559016 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51837 0 0 0 2 54558998 54559018 mRNA hsa-miR-599 GNL3L miRanda miRanda
14034 chr17 62223476 62223476 1 + G A LUSC 62223477 + 62223457 62223497 41 CCAATTAAAGCACGTGTTAGACTGCTGACGCGGGTGATGCG CCAATTAAAGCACGTGTTAAACTGCTGACGCGGGTGATGCG < 41bp 1 0.429818447190178 1 0.959578156471252 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223477 chr17:62223476 . . 0 hm6A_associated_SNPs_51843 0 0 1 1 62223457 62223479 mRNA hsa-miR-505 SNORD104 miRanda miRanda
14034 chr12 110784109 110784109 1 + G A LUSC 110784122 + 110784102 110784142 41 GTGGCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCA GTGGCCCACAACTACCTGGAACCTGGTAAAGAGTGTGTGCA < 41bp 1 0.462427557736878 1 0.936612725257874 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110784122 chr12:110784109 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_51845 0 0 1 2 110784098 110784119 mRNA hsa-miR-196a ATP2A2 miRanda miRanda
14034 chr12 110784109 110784109 1 + G A LUSC 110784122 + 110784102 110784142 41 GTGGCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCA GTGGCCCACAACTACCTGGAACCTGGTAAAGAGTGTGTGCA < 41bp 1 0.462427557736878 1 0.936612725257874 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110784122 chr12:110784109 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_51845 0 0 1 2 110784098 110784119 mRNA hsa-miR-196b ATP2A2 miRanda miRanda
14034 chr1 145281382 145281382 1 + A G LUSC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAGTGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0623988544068322 1 0.0868914723396301 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281382 synonymous SNV . 0 hm6A_associated_SNPs_51865 0 0 1 2 145281369 145281383 mRNA hsa-miR-96 NOTCH2NL miRanda miRanda
14034 chr1 145281382 145281382 1 + A G LUSC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAGTGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0623988544068322 1 0.0868914723396301 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281382 synonymous SNV . 0 hm6A_associated_SNPs_51865 0 0 1 2 145281369 145281383 mRNA hsa-miR-1271 NOTCH2NL miRanda miRanda
14034 chr12 57884041 57884041 1 + C T LUSC 57884022 + 57884002 57884042 41 CCCTGCACAGCTGGTTCCAGACACTGAGTACCCAGGAACCA CCCTGCACAGCTGGTTCCAGACACTGAGTACCCAGGAACTA < 41bp 1 0.735171539509981 1 0.73939174413681 experiment 0.529656920980038 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MARS ENSG00000166986 CDS Human protein_coding chr12:57884022 chr12:57884041 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_51866 0 0 1 2 57884028 57884050 mRNA hsa-miR-221 MARS miRanda miRanda
14034 chr12 57884041 57884041 1 + C T LUSC 57884022 + 57884002 57884042 41 CCCTGCACAGCTGGTTCCAGACACTGAGTACCCAGGAACCA CCCTGCACAGCTGGTTCCAGACACTGAGTACCCAGGAACTA < 41bp 1 0.735171539509981 1 0.73939174413681 experiment 0.529656920980038 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MARS ENSG00000166986 CDS Human protein_coding chr12:57884022 chr12:57884041 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_51866 0 0 1 2 57884031 57884050 mRNA hsa-miR-222 MARS miRanda miRanda
14034 chr12 57884041 57884041 1 + C T LUSC 57884039 + 57884019 57884059 41 CAGACACTGAGTACCCAGGAACCATGTCAGCGAGCTGCAGA CAGACACTGAGTACCCAGGAACTATGTCAGCGAGCTGCAGA < 41bp 1 0.602494837693881 1 0.94930624961853 experiment 0.795010324612238 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MARS ENSG00000166986 CDS Human protein_coding chr12:57884039 chr12:57884041 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_51867 0 0 1 2 57884028 57884050 mRNA hsa-miR-221 MARS miRanda miRanda
14034 chr12 57884041 57884041 1 + C T LUSC 57884039 + 57884019 57884059 41 CAGACACTGAGTACCCAGGAACCATGTCAGCGAGCTGCAGA CAGACACTGAGTACCCAGGAACTATGTCAGCGAGCTGCAGA < 41bp 1 0.602494837693881 1 0.94930624961853 experiment 0.795010324612238 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MARS ENSG00000166986 CDS Human protein_coding chr12:57884039 chr12:57884041 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_51867 0 0 1 2 57884031 57884050 mRNA hsa-miR-222 MARS miRanda miRanda
14034 chr20 279264 279264 1 + G C LUSC 279254 + 279234 279274 41 GCTTTAAATGTGGTTCCCGGACCCACATGAGCGGCAGCTGC GCTTTAAATGTGGTTCCCGGACCCACATGACCGGCAGCTGC < 41bp 1 0.728991134204559 1 0.994758605957031 experiment 0.542017731590882 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 ZCCHC3 ENSG00000177764 CDS Human other chr20:279254 chr20:279264 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_51881 0 0 1 1 279253 279273 mRNA hsa-miR-22 ZCCHC3 miRanda miRanda
14034 chr5 68423946 68423946 1 + G C LUSC 68423941 + 68423921 68423961 41 GTGACATCTGATGTGCTAGAACAAAGAATAGTACAGCAGGT GTGACATCTGATGTGCTAGAACAAACAATAGTACAGCAGGT < 41bp 1 0.677799413843473 1 0.00376364588737488 experiment 0.644401172313053 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68423941 chr5:68423946 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_51914 0 0 0 1 68423940 68423959 mRNA hsa-miR-370 SLC30A5 miRanda miRanda
14034 chr5 118728999 118728999 1 + C T LUSC 118729016 + 118728996 118729036 41 AATCCTTTTGGGAATTTTAAACCCCACTTACAAAAACTATG AATTCTTTTGGGAATTTTAAACCCCACTTACAAAAACTATG < 41bp 1 0.655895527615272 1 0.989898979663849 experiment 0.688208944769455 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118729016 chr5:118728999 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_51935 0 0 1 1 118728987 118729010 mRNA hsa-miR-150 TNFAIP8 miRanda miRanda
14034 chr14 75302035 75302035 1 + G A LUSC 75302036 + 75302016 75302056 41 GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGAT GCCATAGGTTTTGTGGTCGAACAGACTGATTGGGAGAAGAT < 41bp 1 0.625339674253489 1 0.300394743680954 experiment 0.749320651493021 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75302036 chr14:75302035 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_51979 0 0 1 1 75302029 75302052 mRNA hsa-miR-150 YLPM1 miRanda miRanda
14034 chr2 58386588 58386588 1 + T C LUSC 58386581 + 58386561 58386601 41 CAGCTATACACAATTCCCAAACTCATTTTATGAGCCTCATC CAGCTATACACAATTCCCAAACTCATTCTATGAGCCTCATC < 41bp 1 0.790542930215306 1 0.779167115688324 experiment 0.418914139569389 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 28 VRK2 ENSG00000028116 CDS Human protein_coding chr2:58386581 chr2:58386588 synonymous SNV . 0 hm6A_associated_SNPs_51985 0 0 1 1 58386578 58386599 mRNA hsa-miR-485-5p VRK2 miRanda miRanda
14034 chr2 160035487 160035487 1 + C T LUSC 160035469 + 160035449 160035489 41 TCGCATCCCTCCACCCCATGACAGACGAGCAGATCTTTCAG TCGCATCCCTCCACCCCATGACAGACGAGCAGATCTTTTAG < 41bp 1 0.453618992328576 1 0.960603713989258 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 TANC1 ENSG00000115183 CDS Human protein_coding chr2:160035469 chr2:160035487 stopgain 0.997 1 hm6A_associated_SNPs_52005 0 0 1 1 160035483 160035504 mRNA hsa-miR-338-3p TANC1 miRanda miRanda
14034 chrX 77378727 77378727 1 + G A LUSC 77378738 + 77378718 77378758 41 GGGAGCCAAGATTGTCAAAGACCTAATGTCCAAAGCTGAGA GGGAGCCAAAATTGTCAAAGACCTAATGTCCAAAGCTGAGA < 41bp 1 0.416994476553839 1 0.127191662788391 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77378738 chrX:77378727 synonymous SNV . 0 hm6A_associated_SNPs_52053 0 0 1 2 77378704 77378727 mRNA hsa-miR-133a PGK1 miRanda miRanda
14034 chrX 77378727 77378727 1 + G A LUSC 77378738 + 77378718 77378758 41 GGGAGCCAAGATTGTCAAAGACCTAATGTCCAAAGCTGAGA GGGAGCCAAAATTGTCAAAGACCTAATGTCCAAAGCTGAGA < 41bp 1 0.416994476553839 1 0.127191662788391 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77378738 chrX:77378727 synonymous SNV . 0 hm6A_associated_SNPs_52053 0 0 1 2 77378704 77378727 mRNA hsa-miR-133b PGK1 miRanda miRanda
14034 chrX 73046179 73046179 1 - G C LUSC 73046176 - 73046156 73046196 41 TTAACTTCCCTCAGGAGCAGACATTCATATAGGTGATACTG TTAACTTCCCTCAGGAGGAGACATTCATATAGGTGATACTG < 41bp 1 0.765851860965971 1 0.821465253829956 experiment 0.468296278068059 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046176 chrX:73046179 . . 0 hm6A_associated_SNPs_52077 0 0 1 2 73046172 73046179 lncRNA hsa-miR-654-3p XIST miRanda starBase2
14034 chrX 73046179 73046179 1 - G C LUSC 73046176 - 73046156 73046196 41 TTAACTTCCCTCAGGAGCAGACATTCATATAGGTGATACTG TTAACTTCCCTCAGGAGGAGACATTCATATAGGTGATACTG < 41bp 1 0.765851860965971 1 0.821465253829956 experiment 0.468296278068059 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046176 chrX:73046179 . . 0 hm6A_associated_SNPs_52077 0 0 1 2 73046172 73046193 lncRNA hsa-miR-654-3p XIST miRanda starBase2
14034 chr17 30510218 30510218 1 + C T LUSC 30510212 + 30510192 30510232 41 TTCAGCGAAAAACCTGAAGAACATATCAGAGCTCTTTTATT TTCAGCGAAAAACCTGAAGAACATATTAGAGCTCTTTTATT < 41bp 1 0.660511028172755 1 0.818539321422577 experiment 0.678977943654491 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30510212 chr17:30510218 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_52110 0 0 1 2 30510198 30510219 mRNA hsa-miR-190 RHOT1 miRanda miRanda
14034 chr17 30510218 30510218 1 + C T LUSC 30510212 + 30510192 30510232 41 TTCAGCGAAAAACCTGAAGAACATATCAGAGCTCTTTTATT TTCAGCGAAAAACCTGAAGAACATATTAGAGCTCTTTTATT < 41bp 1 0.660511028172755 1 0.818539321422577 experiment 0.678977943654491 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30510212 chr17:30510218 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_52110 0 0 1 2 30510199 30510219 mRNA hsa-miR-190b RHOT1 miRanda miRanda
14034 chr2 190728610 190728610 1 + C A LUSC 190728620 + 190728600 190728640 41 CCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCA CCCAGAAGCAAAAGTTAAAAACCTCATTATCTAATCAACCA < 41bp 1 0.600636193390832 1 0.958063840866089 experiment 0.798727613218335 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728620 chr2:190728610 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_52202 0 0 1 1 190728587 190728612 mRNA hsa-miR-218 PMS1 miRanda miRanda
14034 chr5 35876586 35876586 1 + T A LUSC 35876581 + 35876561 35876601 41 CATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACC CATGTCCAGCTTCTACCAAAACCAGAGAAGTGTAAGAAACC < 41bp 1 0.401216246324636 1 0.485745847225189 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876581 chr5:35876586 stoploss 0.251 0 hm6A_associated_SNPs_52234 0 0 0 3 35876571 35876594 mRNA hsa-miR-181a IL7R miRanda miRanda
14034 chr5 35876586 35876586 1 + T A LUSC 35876581 + 35876561 35876601 41 CATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACC CATGTCCAGCTTCTACCAAAACCAGAGAAGTGTAAGAAACC < 41bp 1 0.401216246324636 1 0.485745847225189 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876581 chr5:35876586 stoploss 0.251 0 hm6A_associated_SNPs_52234 0 0 0 3 35876571 35876594 mRNA hsa-miR-181b IL7R miRanda miRanda
14034 chr5 35876586 35876586 1 + T A LUSC 35876581 + 35876561 35876601 41 CATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACC CATGTCCAGCTTCTACCAAAACCAGAGAAGTGTAAGAAACC < 41bp 1 0.401216246324636 1 0.485745847225189 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 26 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876581 chr5:35876586 stoploss 0.251 0 hm6A_associated_SNPs_52234 0 0 0 3 35876571 35876594 mRNA hsa-miR-181d IL7R miRanda miRanda
14034 chr5 35876586 35876586 1 + T A LUSC 35876599 + 35876579 35876619 41 AAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTG AAACCAGAGAAGTGTAAGAAACCCAGACTGAACTTACCGTG < 41bp 1 0.559433885420018 1 0.851830303668976 experiment 0.881132229159963 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876599 chr5:35876586 stoploss 0.251 0 hm6A_associated_SNPs_52235 0 0 0 3 35876571 35876594 mRNA hsa-miR-181a IL7R miRanda miRanda
14034 chr5 35876586 35876586 1 + T A LUSC 35876599 + 35876579 35876619 41 AAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTG AAACCAGAGAAGTGTAAGAAACCCAGACTGAACTTACCGTG < 41bp 1 0.559433885420018 1 0.851830303668976 experiment 0.881132229159963 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876599 chr5:35876586 stoploss 0.251 0 hm6A_associated_SNPs_52235 0 0 0 3 35876571 35876594 mRNA hsa-miR-181b IL7R miRanda miRanda
14034 chr5 35876586 35876586 1 + T A LUSC 35876599 + 35876579 35876619 41 AAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTG AAACCAGAGAAGTGTAAGAAACCCAGACTGAACTTACCGTG < 41bp 1 0.559433885420018 1 0.851830303668976 experiment 0.881132229159963 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876599 chr5:35876586 stoploss 0.251 0 hm6A_associated_SNPs_52235 0 0 0 3 35876571 35876594 mRNA hsa-miR-181d IL7R miRanda miRanda
14034 chr1 82456620 82456620 1 + G A LUSC 82456627 + 82456607 82456647 41 CAGCCCTGACATGGAAGAAGACCTCTCTCCCTCCAGGAGGA CAGCCCTGACATGAAAGAAGACCTCTCTCCCTCCAGGAGGA < 41bp 1 0.310074121484579 1 0.996962010860443 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 14 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456627 chr1:82456620 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_52280 0 0 1 1 82456616 82456637 mRNA hsa-miR-185 LPHN2 miRanda miRanda
14034 chr6 30459024 30459024 1 + G A LUSC 30459012 + 30458992 30459032 41 ACCCTGCGGAGATCACACTGACCTGGCAGCAGGATGGGGAG ACCCTGCGGAGATCACACTGACCTGGCAGCAGAATGGGGAG < 41bp 1 0.295627124830067 1 0.646054923534393 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 HLA-E ENSG00000204592 CDS Human protein_coding chr6:30459012 chr6:30459024 nonsynonymous SNV 0.459 3 hm6A_associated_SNPs_52320 0 0 1 1 30459002 30459025 mRNA hsa-miR-370 HLA-E miRanda miRanda
14034 chrX 73046593 73046593 1 - A T LUSC 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGAAAGAGGACCCAAGCGAAAAAGGTATCT < 41bp 1 0.31311128309888 1 0.941078424453735 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046593 . . 0 hm6A_associated_SNPs_52326 0 0 1 3 73046585 73046606 lncRNA hsa-miR-3909 XIST miRanda starBase2
14034 chrX 73046593 73046593 1 - A T LUSC 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGAAAGAGGACCCAAGCGAAAAAGGTATCT < 41bp 1 0.31311128309888 1 0.941078424453735 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046593 . . 0 hm6A_associated_SNPs_52326 0 0 1 3 73046585 73046601 lncRNA hsa-miR-6852-3p XIST miRanda starBase2
14034 chrX 73046593 73046593 1 - A T LUSC 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGAAAGAGGACCCAAGCGAAAAAGGTATCT < 41bp 1 0.31311128309888 1 0.941078424453735 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046593 . . 0 hm6A_associated_SNPs_52326 0 0 1 3 73046592 73046614 lncRNA hsa-miR-7151-5p XIST miRanda starBase2
14034 chr3 130735088 130735088 1 + C T LUSC 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTT < 41bp 1 0.694789966871056 1 0.811838388442993 experiment 0.610420066257888 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 41 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735088 nonsynonymous SNV 0.913 2 hm6A_associated_SNPs_52369 0 0 0 2 130735078 130735098 mRNA hsa-miR-378 ATP2C1 miRanda miRanda
14034 chr3 130735088 130735088 1 + C T LUSC 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTT < 41bp 1 0.694789966871056 1 0.811838388442993 experiment 0.610420066257888 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 41 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735088 nonsynonymous SNV 0.913 2 hm6A_associated_SNPs_52369 0 0 0 2 130735077 130735098 mRNA hsa-miR-422a ATP2C1 miRanda miRanda
14034 chr11 62650436 62650436 1 + T C LUSC 62650449 + 62650429 62650469 41 GTGGTTCTCCACTCAGGTTGACACTGTGGCCACCAAGGTGA GTGGTTCCCCACTCAGGTTGACACTGTGGCCACCAAGGTGA < 41bp 1 0.2912740123843 1 0.0288176238536835 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62650449 chr11:62650436 nonsynonymous SNV 0.112 1 hm6A_associated_SNPs_52374 0 0 1 1 62650435 62650457 mRNA hsa-miR-128 SLC3A2 miRanda miRanda
14034 chr16 30094805 30094805 1 + C A LUSC 30094823 + 30094803 30094843 41 TGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACT TGAGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACT < 41bp 1 0.430232163546108 1 0.745727956295013 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 PPP4C ENSG00000149923 CDS Human protein_coding chr16:30094823 chr16:30094805 nonsynonymous SNV 0.827 4 hm6A_associated_SNPs_52414 0 0 1 2 30094791 30094814 mRNA hsa-miR-431 PPP4C miRanda miRanda
14034 chr16 30094805 30094805 1 + C A LUSC 30094823 + 30094803 30094843 41 TGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACT TGAGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACT < 41bp 1 0.430232163546108 1 0.745727956295013 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 PPP4C ENSG00000149923 CDS Human protein_coding chr16:30094823 chr16:30094805 nonsynonymous SNV 0.827 4 hm6A_associated_SNPs_52414 0 0 1 2 30094800 30094821 mRNA hsa-miR-615-3p PPP4C miRanda miRanda
14034 chr11 65272551 65272551 1 + G A LUSC 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTAAATAGATTT < 41bp 1 0.121139810059218 1 0.811274170875549 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272551 . . 0 hm6A_associated_SNPs_52416 0 0 1 7 65272547 65272568 lncRNA hsa-miR-320a MALAT1 miRanda starBase2
14034 chr11 65272551 65272551 1 + G A LUSC 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTAAATAGATTT < 41bp 1 0.121139810059218 1 0.811274170875549 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272551 . . 0 hm6A_associated_SNPs_52416 0 0 1 7 65272547 65272568 lncRNA hsa-miR-320b MALAT1 miRanda starBase2
14034 chr11 65272551 65272551 1 + G A LUSC 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTAAATAGATTT < 41bp 1 0.121139810059218 1 0.811274170875549 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272551 . . 0 hm6A_associated_SNPs_52416 0 0 1 7 65272549 65272568 lncRNA hsa-miR-320c MALAT1 miRanda starBase2
14034 chr11 65272551 65272551 1 + G A LUSC 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTAAATAGATTT < 41bp 1 0.121139810059218 1 0.811274170875549 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272551 . . 0 hm6A_associated_SNPs_52416 0 0 1 7 65272550 65272568 lncRNA hsa-miR-320d MALAT1 miRanda starBase2
14034 chr11 65272551 65272551 1 + G A LUSC 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTAAATAGATTT < 41bp 1 0.121139810059218 1 0.811274170875549 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272551 . . 0 hm6A_associated_SNPs_52416 0 0 1 7 65272549 65272568 lncRNA hsa-miR-4429 MALAT1 miRanda starBase2
14034 chr11 65272551 65272551 1 + G A LUSC 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTAAATAGATTT < 41bp 1 0.121139810059218 1 0.811274170875549 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272551 . . 0 hm6A_associated_SNPs_52416 0 0 1 7 65272551 65272575 lncRNA hsa-miR-338-3p MALAT1 miRanda starBase2
14034 chr11 65272551 65272551 1 + G A LUSC 65272540 + 65272520 65272560 41 AAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTT AAAGTCAGATCAGTTATGGGACAATAGTATTAAATAGATTT < 41bp 1 0.121139810059218 1 0.811274170875549 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272540 chr11:65272551 . . 0 hm6A_associated_SNPs_52416 0 0 1 7 65272547 65272569 lncRNA hsa-miR-9-3p MALAT1 miRanda starBase2
14034 chr11 65272573 65272573 1 + G A LUSC 65272579 + 65272559 65272599 41 TTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGT TTCAGCTTTATGCTAGAGTAACTGGCATGTGAGCAAACTGT < 41bp 1 0.0599985410170057 1 0.580472886562347 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 15 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272579 chr11:65272573 . . 0 hm6A_associated_SNPs_52417 0 0 1 1 65272551 65272575 lncRNA hsa-miR-338-3p MALAT1 miRanda starBase2
14034 chr7 116166701 116166701 1 + G T LUSC 116166719 + 116166699 116166739 41 CTGGTCAACCGCGACCCTAAACACCTCAACGATGACGTGGT CTTGTCAACCGCGACCCTAAACACCTCAACGATGACGTGGT < 41bp 1 0.443599426533801 1 0.988730311393738 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 3 CAV1 ENSG00000105974 CDS Human protein_coding chr7:116166719 chr7:116166701 synonymous SNV . 0 hm6A_associated_SNPs_52432 0 0 1 1 116166680 116166702 mRNA hsa-miR-125a-3p CAV1 miRanda miRanda
14034 chr10 102749641 102749641 1 + G T LUSC 102749627 + 102749607 102749647 41 TATTTCATGACTTTCCATGGACAGCAAAGCATCAGGTGAGA TATTTCATGACTTTCCATGGACAGCAAAGCATCATGTGAGA < 41bp 1 0.553796230079952 1 0.930517554283142 experiment 0.892407539840096 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 TWNK ENSG00000107815 CDS Human protein_coding chr10:102749627 chr10:102749641 nonsynonymous SNV 0.805 4 hm6A_associated_SNPs_52450 0 0 0 2 102749640 102749641 mRNA hsa-miR-33a C10orf2 miRanda miRanda
14034 chr10 102749641 102749641 1 + G T LUSC 102749627 + 102749607 102749647 41 TATTTCATGACTTTCCATGGACAGCAAAGCATCAGGTGAGA TATTTCATGACTTTCCATGGACAGCAAAGCATCATGTGAGA < 41bp 1 0.553796230079952 1 0.930517554283142 experiment 0.892407539840096 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 TWNK ENSG00000107815 CDS Human protein_coding chr10:102749627 chr10:102749641 nonsynonymous SNV 0.805 4 hm6A_associated_SNPs_52450 0 0 0 2 102749641 102749641 mRNA hsa-miR-33b C10orf2 miRanda miRanda
14034 chr3 56628034 56628034 1 + G T LUSC 56628041 + 56628021 56628061 41 CGAGACAGACGACGACAAAAACAATTAGAGCATCAGGTATT CGAGACAGACGACTACAAAAACAATTAGAGCATCAGGTATT < 41bp 1 0.56422282197512 1 0.386509299278259 experiment 0.87155435604976 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56628041 chr3:56628034 nonsynonymous SNV 0.886 4 hm6A_associated_SNPs_52459 0 0 1 1 56628019 56628042 mRNA hsa-miR-129-5p CCDC66 miRanda miRanda
14034 chr12 57910229 57910229 1 + C T LUSC 57910235 + 57910215 57910255 41 TAGGGAAACATTGTCCGAGAACTGAAAGCACAAAAGGCAGA TAGGGAAACATTGTTCGAGAACTGAAAGCACAAAAGGCAGA < 41bp 1 0.602377105046172 1 0.958057403564453 experiment 0.795245789907656 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 MARS ENSG00000166986 CDS Human protein_coding chr12:57910235 chr12:57910229 synonymous SNV . 0 hm6A_associated_SNPs_52466 0 0 1 1 57910222 57910247 mRNA hsa-miR-218 MARS miRanda miRanda
14034 chr11 65267905 65267905 1 + G A LUSC 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GATTCAGTGAATCTAGGAAAACAGCAGCAGACAGGATTCCA < 41bp 1 0.156542067515109 1 0.980900883674622 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267905 . . 0 hm6A_associated_SNPs_52471 0 0 1 1 65267882 65267905 lncRNA hsa-miR-384 MALAT1 miRanda starBase2
14034 chr11 65267905 65267905 1 + G A LUSC 65267916 + 65267896 65267936 41 ATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTG ATCTAGGAAAACAGCAGCAGACAGGATTCCAGGAACCAGTG < 41bp 1 0.220067783197022 1 0.992389321327209 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 10 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267916 chr11:65267905 . . 0 hm6A_associated_SNPs_52472 0 0 1 1 65267882 65267905 lncRNA hsa-miR-384 MALAT1 miRanda starBase2
14034 chr2 190728639 190728639 1 + C T LUSC 190728620 + 190728600 190728640 41 CCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCA CCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACTA < 41bp 1 0.614009175993181 1 0.942180335521698 experiment 0.771981648013638 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728620 chr2:190728639 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_52539 0 0 1 1 190728623 190728644 mRNA hsa-miR-9 PMS1 miRanda miRanda
14034 chr2 190728639 190728639 1 + C T LUSC 190728643 + 190728623 190728663 41 TCATTATCTAATCAACCAAAACTTGATGAACTCCTTCAGTC TCATTATCTAATCAACTAAAACTTGATGAACTCCTTCAGTC < 41bp 1 0.736045175165728 1 0.946669280529022 experiment 0.527909649668544 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728643 chr2:190728639 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_52540 0 0 1 1 190728623 190728644 mRNA hsa-miR-9 PMS1 miRanda miRanda
14034 chrX 74519652 74519652 1 + A T LUSC 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACTCAAAGAGCCAAAGTATAT < 41bp 1 0.255207313573477 1 0.882509171962738 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519652 synonymous SNV . 0 hm6A_associated_SNPs_52580 0 0 0 3 74519646 74519666 mRNA hsa-miR-9 UPRT miRanda miRanda
14034 chrX 74519652 74519652 1 + A T LUSC 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACTCAAAGAGCCAAAGTATAT < 41bp 1 0.255207313573477 1 0.882509171962738 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519652 synonymous SNV . 0 hm6A_associated_SNPs_52580 0 0 0 3 74519639 74519664 mRNA hsa-miR-149 UPRT miRanda miRanda
14034 chrX 74519652 74519652 1 + A T LUSC 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGAGTGATGAGGAGACTCAAAGAGCCAAAGTATAT < 41bp 1 0.255207313573477 1 0.882509171962738 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 23 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519652 synonymous SNV . 0 hm6A_associated_SNPs_52580 0 0 0 3 74519637 74519656 mRNA hsa-miR-599 UPRT miRanda miRanda
14034 chr11 62650380 62650380 1 + G T LUSC 62650398 + 62650378 62650418 41 AGGCATCCGTGTCATTCTGGACCTTACTCCCAACTACCGGG AGTCATCCGTGTCATTCTGGACCTTACTCCCAACTACCGGG < 41bp 1 0.150510425486 1 0.25825822353363 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62650398 chr11:62650380 nonsynonymous SNV 0.160 5 hm6A_associated_SNPs_52609 0 0 1 1 62650370 62650393 mRNA hsa-miR-425 SLC3A2 miRanda miRanda
14034 chr17 61499272 61499272 1 + T C LUSC 61499269 + 61499249 61499289 41 GAGACTCTCGGCAAGGGCAGACATCCCCTATCAAACCAAAG GAGACTCTCGGCAAGGGCAGACACCCCCTATCAAACCAAAG < 41bp 1 0.720876121183328 1 0.979803085327148 experiment 0.558247757633344 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 TANC2 ENSG00000170921 CDS Human protein_coding chr17:61499269 chr17:61499272 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_52610 0 0 0 1 61499268 61499290 mRNA hsa-miR-9 TANC2 miRanda miRanda
14034 chr17 61499272 61499272 1 + T C LUSC 61499283 + 61499263 61499303 41 GGGCAGACATCCCCTATCAAACCAAAGAGACCGTTCGTGGA GGGCAGACACCCCCTATCAAACCAAAGAGACCGTTCGTGGA < 41bp 1 0.60694119957106 1 0.976763844490051 experiment 0.78611760085788 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 TANC2 ENSG00000170921 CDS Human protein_coding chr17:61499283 chr17:61499272 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_52611 0 0 0 1 61499268 61499290 mRNA hsa-miR-9 TANC2 miRanda miRanda
14034 chr17 30521103 30521103 1 + G A LUSC 30521104 + 30521084 30521124 41 ATGATGATGACCTGGATTTGACACCTGAATATTTGTTCCCC ATGATGATGACCTGGATTTAACACCTGAATATTTGTTCCCC < 41bp 1 0.600715147626854 1 0.536535501480103 experiment 0.798569704746291 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521104 chr17:30521103 synonymous SNV . 0 hm6A_associated_SNPs_52645 0 0 1 2 30521084 30521108 mRNA hsa-miR-19a RHOT1 miRanda miRanda
14034 chr17 30521103 30521103 1 + G A LUSC 30521104 + 30521084 30521124 41 ATGATGATGACCTGGATTTGACACCTGAATATTTGTTCCCC ATGATGATGACCTGGATTTAACACCTGAATATTTGTTCCCC < 41bp 1 0.600715147626854 1 0.536535501480103 experiment 0.798569704746291 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521104 chr17:30521103 synonymous SNV . 0 hm6A_associated_SNPs_52645 0 0 1 2 30521084 30521108 mRNA hsa-miR-19b RHOT1 miRanda miRanda
14034 chr11 837554 837554 1 + G A LUSC 837548 + 837528 837568 41 CGGTGGCCGTGTGGTCCCAGACAGCTGCTGCAAGACGGTGG CGGTGGCCGTGTGGTCCCAGACAGCTACTGCAAGACGGTGG < 41bp 1 0.46556662290538 1 0.963780879974365 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 CD151 ENSG00000177697 CDS Human protein_coding chr11:837548 chr11:837554 nonsynonymous SNV 0.800 5 hm6A_associated_SNPs_52650 0 0 1 1 837543 837564 mRNA hsa-miR-431 CD151 miRanda miRanda
14034 chr1 10328248 10328248 1 + G A LUSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGCCATTCCCACGCT < 41bp 1 0.506299391141043 1 0.0216647684574127 experiment 0.987401217717915 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328248 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_52666 0 0 1 5 10328247 10328267 mRNA hsa-miR-30a KIF1B miRanda miRanda
14034 chr1 10328248 10328248 1 + G A LUSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGCCATTCCCACGCT < 41bp 1 0.506299391141043 1 0.0216647684574127 experiment 0.987401217717915 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328248 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_52666 0 0 1 5 10328245 10328267 mRNA hsa-miR-30c KIF1B miRanda miRanda
14034 chr1 10328248 10328248 1 + G A LUSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGCCATTCCCACGCT < 41bp 1 0.506299391141043 1 0.0216647684574127 experiment 0.987401217717915 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328248 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_52666 0 0 1 5 10328247 10328267 mRNA hsa-miR-30d KIF1B miRanda miRanda
14034 chr1 10328248 10328248 1 + G A LUSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGCCATTCCCACGCT < 41bp 1 0.506299391141043 1 0.0216647684574127 experiment 0.987401217717915 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328248 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_52666 0 0 1 5 10328246 10328267 mRNA hsa-miR-30b KIF1B miRanda miRanda
14034 chr1 10328248 10328248 1 + G A LUSC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCTACAAACATGAATGAAACAAGTAGCCATTCCCACGCT < 41bp 1 0.506299391141043 1 0.0216647684574127 experiment 0.987401217717915 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 31 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328248 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_52666 0 0 1 5 10328246 10328267 mRNA hsa-miR-30e KIF1B miRanda miRanda
14034 chr7 151815830 151815830 1 + T C LUSC 151815848 + 151815828 151815868 41 CGTGGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGG CGCGGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGG < 41bp 1 0.46611702611388 1 0.245548397302628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151815848 chr7:151815830 nonsynonymous SNV 0.977 1 hm6A_associated_SNPs_52679 0 0 1 3 151815816 151815837 mRNA hsa-miR-29a GALNT11 miRanda miRanda
14034 chr7 151815830 151815830 1 + T C LUSC 151815848 + 151815828 151815868 41 CGTGGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGG CGCGGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGG < 41bp 1 0.46611702611388 1 0.245548397302628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151815848 chr7:151815830 nonsynonymous SNV 0.977 1 hm6A_associated_SNPs_52679 0 0 1 3 151815815 151815837 mRNA hsa-miR-29b GALNT11 miRanda miRanda
14034 chr7 151815830 151815830 1 + T C LUSC 151815848 + 151815828 151815868 41 CGTGGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGG CGCGGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGG < 41bp 1 0.46611702611388 1 0.245548397302628 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151815848 chr7:151815830 nonsynonymous SNV 0.977 1 hm6A_associated_SNPs_52679 0 0 1 3 151815816 151815837 mRNA hsa-miR-29c GALNT11 miRanda miRanda
14034 chr6 44122607 44122607 1 + A G LUSC 44122589 + 44122569 44122609 41 AGACTTCCAGTCTTGCGAGGACAGCCTCATAGAGAATGAGA AGACTTCCAGTCTTGCGAGGACAGCCTCATAGAGAATGGGA < 41bp 1 0.793138273493234 1 0.978065609931946 experiment 0.413723453013531 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122589 chr6:44122607 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52682 0 0 1 1 44122591 44122612 mRNA hsa-miR-216a TMEM63B miRanda miRanda
14034 chr17 65688927 65688927 1 + G T LUSC 65688912 + 65688892 65688932 41 GGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGACCCT GGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCATACCCT < 41bp 1 0.715288075891246 1 0.979067206382751 experiment 0.569423848217508 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65688912 chr17:65688927 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_52706 0 0 0 3 65688925 65688947 mRNA hsa-miR-135a PITPNC1 miRanda miRanda
14034 chr17 65688927 65688927 1 + G T LUSC 65688912 + 65688892 65688932 41 GGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGACCCT GGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCATACCCT < 41bp 1 0.715288075891246 1 0.979067206382751 experiment 0.569423848217508 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65688912 chr17:65688927 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_52706 0 0 0 3 65688908 65688933 mRNA hsa-miR-296-3p PITPNC1 miRanda miRanda
14034 chr17 65688927 65688927 1 + G T LUSC 65688912 + 65688892 65688932 41 GGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGACCCT GGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCATACCCT < 41bp 1 0.715288075891246 1 0.979067206382751 experiment 0.569423848217508 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65688912 chr17:65688927 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_52706 0 0 0 3 65688927 65688947 mRNA hsa-miR-135b PITPNC1 miRanda miRanda
14034 chr3 39125724 39125724 1 + A C LUSC 39125740 + 39125720 39125760 41 GCCAAATTGGTTCTCAGTAGACTTAAAAACAGGGGTAAGTT GCCACATTGGTTCTCAGTAGACTTAAAAACAGGGGTAAGTT < 41bp 1 0.152525525054379 1 0.449181139469147 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 WDR48 ENSG00000114742 CDS Human protein_coding chr3:39125740 chr3:39125724 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52749 0 0 1 3 39125702 39125725 mRNA hsa-miR-96 WDR48 miRanda miRanda
14034 chr3 39125724 39125724 1 + A C LUSC 39125740 + 39125720 39125760 41 GCCAAATTGGTTCTCAGTAGACTTAAAAACAGGGGTAAGTT GCCACATTGGTTCTCAGTAGACTTAAAAACAGGGGTAAGTT < 41bp 1 0.152525525054379 1 0.449181139469147 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 WDR48 ENSG00000114742 CDS Human protein_coding chr3:39125740 chr3:39125724 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52749 0 0 1 3 39125702 39125725 mRNA hsa-miR-182 WDR48 miRanda miRanda
14034 chr3 39125724 39125724 1 + A C LUSC 39125740 + 39125720 39125760 41 GCCAAATTGGTTCTCAGTAGACTTAAAAACAGGGGTAAGTT GCCACATTGGTTCTCAGTAGACTTAAAAACAGGGGTAAGTT < 41bp 1 0.152525525054379 1 0.449181139469147 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 5 WDR48 ENSG00000114742 CDS Human protein_coding chr3:39125740 chr3:39125724 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52749 0 0 1 3 39125705 39125725 mRNA hsa-miR-1271 WDR48 miRanda miRanda
14034 chr1 75229610 75229610 1 + G A LUSC 75229621 + 75229601 75229641 41 CTTTGGAAAGGGAAACGATGACTAACTTACATCCCAAGATC CTTTGGAAAAGGAAACGATGACTAACTTACATCCCAAGATC < 41bp 1 0.771302425218205 1 0.876216351985931 experiment 0.45739514956359 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229621 chr1:75229610 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_52766 0 0 1 2 75229594 75229614 mRNA hsa-miR-204 TYW3 miRanda miRanda
14034 chr1 75229610 75229610 1 + G A LUSC 75229621 + 75229601 75229641 41 CTTTGGAAAGGGAAACGATGACTAACTTACATCCCAAGATC CTTTGGAAAAGGAAACGATGACTAACTTACATCCCAAGATC < 41bp 1 0.771302425218205 1 0.876216351985931 experiment 0.45739514956359 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 10 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229621 chr1:75229610 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_52766 0 0 1 2 75229594 75229614 mRNA hsa-miR-211 TYW3 miRanda miRanda
14034 chr1 75229610 75229610 1 + G A LUSC 75229625 + 75229605 75229645 41 GGAAAGGGAAACGATGACTAACTTACATCCCAAGATCAAAG GGAAAAGGAAACGATGACTAACTTACATCCCAAGATCAAAG < 41bp 1 0.730766510740862 1 0.795711517333984 experiment 0.538466978518275 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229625 chr1:75229610 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_52767 0 0 1 2 75229594 75229614 mRNA hsa-miR-204 TYW3 miRanda miRanda
14034 chr1 75229610 75229610 1 + G A LUSC 75229625 + 75229605 75229645 41 GGAAAGGGAAACGATGACTAACTTACATCCCAAGATCAAAG GGAAAAGGAAACGATGACTAACTTACATCCCAAGATCAAAG < 41bp 1 0.730766510740862 1 0.795711517333984 experiment 0.538466978518275 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229625 chr1:75229610 nonsynonymous SNV 0.147 0 hm6A_associated_SNPs_52767 0 0 1 2 75229594 75229614 mRNA hsa-miR-211 TYW3 miRanda miRanda
14034 chr4 52777249 52777249 1 + G A LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCACAGCCTAGACATAAACACTGCCAAGTGCATGTTGG < 41bp 1 0.582926029169248 1 0.824824452400208 experiment 0.834147941661503 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777249 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52827 0 0 0 4 52777249 52777272 mRNA hsa-miR-34a DCUN1D4 miRanda miRanda
14034 chr4 52777249 52777249 1 + G A LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCACAGCCTAGACATAAACACTGCCAAGTGCATGTTGG < 41bp 1 0.582926029169248 1 0.824824452400208 experiment 0.834147941661503 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777249 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52827 0 0 0 4 52777245 52777272 mRNA hsa-miR-34c-5p DCUN1D4 miRanda miRanda
14034 chr4 52777249 52777249 1 + G A LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCACAGCCTAGACATAAACACTGCCAAGTGCATGTTGG < 41bp 1 0.582926029169248 1 0.824824452400208 experiment 0.834147941661503 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777249 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52827 0 0 0 4 52777248 52777272 mRNA hsa-miR-449a DCUN1D4 miRanda miRanda
14034 chr4 52777249 52777249 1 + G A LUSC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCACAGCCTAGACATAAACACTGCCAAGTGCATGTTGG < 41bp 1 0.582926029169248 1 0.824824452400208 experiment 0.834147941661503 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 6 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777249 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_52827 0 0 0 4 52777248 52777272 mRNA hsa-miR-449b DCUN1D4 miRanda miRanda
14034 chr11 36680722 36680722 1 + A C LUSC 36680714 + 36680694 36680734 41 GAGAAAGGACACCAGCCCAGACTTAGAGAAATCCTGTGACT GAGAAAGGACACCAGCCCAGACTTAGAGCAATCCTGTGACT < 41bp 1 0.310690133101749 1 0.691096007823944 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680714 chr11:36680722 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_52863 0 0 1 1 36680707 36680728 mRNA hsa-miR-876-5p C11orf74 miRanda miRanda
14034 chr11 36680722 36680722 1 + A C LUSC 36680732 + 36680712 36680752 41 AGACTTAGAGAAATCCTGTGACTGATTCACAGAGGCATTTT AGACTTAGAGCAATCCTGTGACTGATTCACAGAGGCATTTT < 41bp 1 0.277409084342661 1 0.325575411319733 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680732 chr11:36680722 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_52864 0 0 1 1 36680707 36680728 mRNA hsa-miR-876-5p C11orf74 miRanda miRanda
14034 chr7 65751683 65751683 1 + A C LUSC 65751686 + 65751666 65751706 41 TGATCCCAAAATTATTGAAAACACTCGAAGGGTAAGTGAGA TGATCCCAAAATTATTGCAAACACTCGAAGGGTAAGTGAGA < 41bp 1 0.311482387691307 1 0.0763013064861298 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 TPST1 ENSG00000169902 CDS Human protein_coding chr7:65751686 chr7:65751683 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_52884 0 0 0 1 65751671 65751693 mRNA hsa-miR-122 TPST1 miRanda miRanda
14034 chr5 40979881 40979881 1 + G T LUSC 40979882 + 40979862 40979902 41 GCAAAAGGATACTGCCTCTGACAGTTTGCAAGATGCATGTT GCAAAAGGATACTGCCTCTTACAGTTTGCAAGATGCATGTT Direct Loss 1 0.282430170086113 1 0.295755088329315 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 20 C7 ENSG00000112936 CDS Human protein_coding chr5:40979882 chr5:40979881 synonymous SNV . 0 hm6A_associated_SNPs_52918 0 0 0 1 40979877 40979902 mRNA hsa-miR-217 C7 miRanda miRanda
14034 chr4 74277780 74277780 1 + G T LUSC 74277777 + 74277757 74277797 41 CAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCAC CAGAAGTTTCCAAGTTAGTGACATATCTTACCAAAGTCCAC < 41bp 1 0.412308956650791 1 0.0795668363571167 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 ALB ENSG00000163631 CDS Human protein_coding chr4:74277777 chr4:74277780 nonsynonymous SNV 0.818 3 hm6A_associated_SNPs_52931 0 0 1 1 74277773 74277793 mRNA hsa-miR-9 ALB miRanda miRanda
14034 chr13 73357625 73357625 1 + A G LUSC 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT GAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT < 41bp 1 0.377978973528415 1 0.873207569122314 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357625 synonymous SNV . 0 hm6A_associated_SNPs_52945 0 0 1 1 73357605 73357626 mRNA hsa-miR-203 PIBF1 miRanda miRanda
14034 chr14 104038099 104038099 1 + A C LUSC 104038097 + 104038077 104038117 41 CAAAAGCTTAGAAAATTAAGACAAGAAACACAAGAATGGAA CAAAAGCTTAGAAAATTAAGACCAGAAACACAAGAATGGAA < 41bp 1 0.391171432659518 1 0.0699481666088104 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 APOPT1 ENSG00000256053;ENSG00000256500 CDS Human other chr14:104038097 chr14:104038099 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_52959 0 0 1 2 104038079 104038102 mRNA hsa-miR-187 C14orf153 miRanda miRanda
14034 chr14 104038099 104038099 1 + A C LUSC 104038097 + 104038077 104038117 41 CAAAAGCTTAGAAAATTAAGACAAGAAACACAAGAATGGAA CAAAAGCTTAGAAAATTAAGACCAGAAACACAAGAATGGAA < 41bp 1 0.391171432659518 1 0.0699481666088104 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 APOPT1 ENSG00000256053;ENSG00000256500 CDS Human other chr14:104038097 chr14:104038099 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_52959 0 0 1 2 104038091 104038110 mRNA hsa-miR-599 C14orf153 miRanda miRanda
14034 chr6 142487422 142487422 1 + G A LUSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTCACAAATTT < 41bp 1 0.29964239688271 1 0.276760965585709 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487422 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_52961 0 0 1 2 142487406 142487427 mRNA hsa-miR-450a VTA1 miRanda miRanda
14034 chr6 142487422 142487422 1 + G A LUSC 142487409 + 142487389 142487429 41 GAATGAAGATCGATAGTAAAACTCCTGAATGTCGCAAATTT GAATGAAGATCGATAGTAAAACTCCTGAATGTCACAAATTT < 41bp 1 0.29964239688271 1 0.276760965585709 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142487409 chr6:142487422 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_52961 0 0 1 2 142487405 142487426 mRNA hsa-miR-758 VTA1 miRanda miRanda
14034 chr17 42745419 42745419 1 + G T LUSC 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTTATGATTACTTAAGCCATTTGTACCCTT Direct Loss 1 0.472519565203185 1 0.00644803047180176 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745419 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_53059 0 0 0 3 42745404 42745424 mRNA hsa-miR-224 C17orf104 miRanda miRanda
14034 chr17 42745419 42745419 1 + G T LUSC 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTTATGATTACTTAAGCCATTTGTACCCTT Direct Loss 1 0.472519565203185 1 0.00644803047180176 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745419 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_53059 0 0 0 3 42745408 42745431 mRNA hsa-miR-135a C17orf104 miRanda miRanda
14034 chr17 42745419 42745419 1 + G T LUSC 42745420 + 42745400 42745440 41 TGACTTACTTTCTTATGATGACTTAAGCCATTTGTACCCTT TGACTTACTTTCTTATGATTACTTAAGCCATTTGTACCCTT Direct Loss 1 0.472519565203185 1 0.00644803047180176 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42745420 chr17:42745419 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_53059 0 0 0 3 42745408 42745431 mRNA hsa-miR-135b C17orf104 miRanda miRanda
14034 chr10 38654429 38654429 1 + G T LUSC 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTCTCAATGCAAGG < 41bp 1 0.349085908125056 1 0.946123003959656 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 31 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654429 . . 0 hm6A_associated_SNPs_53082 0 0 1 3 38654417 38654437 mRNA hsa-miR-33a HSD17B7P2 miRanda miRanda
14034 chr10 38654429 38654429 1 + G T LUSC 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTCTCAATGCAAGG < 41bp 1 0.349085908125056 1 0.946123003959656 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 31 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654429 . . 0 hm6A_associated_SNPs_53082 0 0 1 3 38654407 38654429 mRNA hsa-miR-143 HSD17B7P2 miRanda miRanda
14034 chr10 38654429 38654429 1 + G T LUSC 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTCTCAATGCAAGG < 41bp 1 0.349085908125056 1 0.946123003959656 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 31 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654429 . . 0 hm6A_associated_SNPs_53082 0 0 1 3 38654418 38654437 mRNA hsa-miR-33b HSD17B7P2 miRanda miRanda
14034 chr10 70502187 70502187 1 + C T LUSC 70502193 + 70502173 70502213 41 CTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCA CTCAGCCAACAGCATAAATAACTGTATCATATCCAACACCA < 41bp 1 0.371917199375659 1 0.276718199253082 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70502193 chr10:70502187 stopgain 1.000 1 hm6A_associated_SNPs_53121 0 0 1 1 70502169 70502189 mRNA hsa-miR-218 CCAR1 miRanda miRanda
14034 chr20 29632721 29632721 1 + G T LUSC 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTCTGGACATGTAGCTATTTATTTACT < 41bp 1 0.508791745289192 1 0.00934898853302002 experiment 0.982416509421615 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 24 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632721 nonsynonymous SNV 0.707 3 hm6A_associated_SNPs_53130 0 0 1 2 29632710 29632721 mRNA hsa-miR-378 FRG1B miRanda miRanda
14034 chr20 29632721 29632721 1 + G T LUSC 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTCTGGACATGTAGCTATTTATTTACT < 41bp 1 0.508791745289192 1 0.00934898853302002 experiment 0.982416509421615 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 24 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632721 nonsynonymous SNV 0.707 3 hm6A_associated_SNPs_53130 0 0 1 2 29632709 29632721 mRNA hsa-miR-422a FRG1B miRanda miRanda
14034 chr1 231488737 231488737 1 + G C LUSC 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTACTTCTC < 41bp 1 0.621445244150711 1 0.741394639015198 experiment 0.757109511698577 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 36 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488737 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_53144 0 0 1 2 231488721 231488743 mRNA hsa-miR-146a C1orf124 miRanda miRanda
14034 chr1 231488737 231488737 1 + G C LUSC 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTACTTCTC < 41bp 1 0.621445244150711 1 0.741394639015198 experiment 0.757109511698577 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 36 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488737 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_53144 0 0 1 2 231488721 231488743 mRNA hsa-miR-146b-5p C1orf124 miRanda miRanda
14034 chrX 153664162 153664162 1 + G T LUSC 153664178 + 153664158 153664198 41 ACATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGAC ACATTATCCTCAGCCTCAAGACCATGGATCGCTTTGATGAC < 41bp 1 0.676941007253161 1 0.95615017414093 experiment 0.646117985493678 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 5 ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153664178 chrX:153664162 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_53148 0 0 1 1 153664154 153664175 mRNA hsa-miR-485-5p ATP6AP1 miRanda miRanda
14034 chr19 50985982 50985982 1 + C T MESO 50985974 + 50985954 50985994 41 GCAGCGCCCCCCTCACTTTGACACTGGACTAGGATGCAGCC GCAGCGCCCCCCTCACTTTGACACTGGATTAGGATGCAGCC < 41bp 1 0.789980371824076 1 0.831246256828308 experiment 0.420039256351847 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 EMC10 ENSG00000161671 CDS Human protein_coding chr19:50985974 chr19:50985982 synonymous SNV . 0 hm6A_associated_SNPs_53163 0 0 1 1 50985976 50985997 mRNA hsa-miR-485-5p C19orf63 miRanda miRanda
14034 chr17 25628844 25628844 1 + C T MESO 25628862 + 25628842 25628882 41 AGCTCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGAAA AGTTCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGAAA < 41bp 1 0.728871338091545 1 0.926069974899292 experiment 0.542257323816909 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25628862 chr17:25628844 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53188 0 0 1 2 25628828 25628849 mRNA hsa-miR-28-5p WSB1 miRanda miRanda
14034 chr17 25628844 25628844 1 + C T MESO 25628862 + 25628842 25628882 41 AGCTCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGAAA AGTTCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGAAA < 41bp 1 0.728871338091545 1 0.926069974899292 experiment 0.542257323816909 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25628862 chr17:25628844 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53188 0 0 1 2 25628827 25628849 mRNA hsa-miR-708 WSB1 miRanda miRanda
14034 chr17 57270889 57270889 1 + C T MESO 57270892 + 57270872 57270912 41 CCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAA CCTGTCCAAGCTGTGGTTAAACATGTCACATGAGTGGTAAA < 41bp 1 0.361754407198855 1 0.106569409370422 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 18 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270892 chr17:57270889 stopgain 0.908 0 hm6A_associated_SNPs_53211 0 0 1 2 57270879 57270901 mRNA hsa-miR-134 PRR11 miRanda miRanda
14034 chr17 57270889 57270889 1 + C T MESO 57270892 + 57270872 57270912 41 CCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAA CCTGTCCAAGCTGTGGTTAAACATGTCACATGAGTGGTAAA < 41bp 1 0.361754407198855 1 0.106569409370422 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 18 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270892 chr17:57270889 stopgain 0.908 0 hm6A_associated_SNPs_53211 0 0 1 2 57270879 57270901 mRNA hsa-miR-542-3p PRR11 miRanda miRanda
14034 chr11 62532849 62532849 1 + A G MESO 62532866 + 62532846 62532886 41 CCAACCCACCATGTTACAAGACAATGGATGAGGTGAGTGGA CCAGCCCACCATGTTACAAGACAATGGATGAGGTGAGTGGA < 41bp 1 0.777606125524351 1 0.317361176013947 experiment 0.444787748951299 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 POLR2G ENSG00000168002 CDS Human protein_coding chr11:62532866 chr11:62532849 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_53212 0 0 1 2 62532842 62532863 mRNA hsa-miR-194 POLR2G miRanda miRanda
14034 chr11 62532849 62532849 1 + A G MESO 62532866 + 62532846 62532886 41 CCAACCCACCATGTTACAAGACAATGGATGAGGTGAGTGGA CCAGCCCACCATGTTACAAGACAATGGATGAGGTGAGTGGA < 41bp 1 0.777606125524351 1 0.317361176013947 experiment 0.444787748951299 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 POLR2G ENSG00000168002 CDS Human protein_coding chr11:62532866 chr11:62532849 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_53212 0 0 1 2 62532848 62532868 mRNA hsa-miR-431 POLR2G miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGAACACCACTGCCTCCCCCAGG Direct Loss 1 0.410364428966081 1 0.946559190750122 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53231 0 0 1 4 39951407 39951437 mRNA hsa-miR-34a MACF1 miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGAACACCACTGCCTCCCCCAGG Direct Loss 1 0.410364428966081 1 0.946559190750122 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53231 0 0 1 4 39951414 39951437 mRNA hsa-miR-34c-5p MACF1 miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGAACACCACTGCCTCCCCCAGG Direct Loss 1 0.410364428966081 1 0.946559190750122 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53231 0 0 1 4 39951412 39951437 mRNA hsa-miR-449a MACF1 miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAACCATGTCTAAGAAGAACACCACTGCCTCCCCCAGG Direct Loss 1 0.410364428966081 1 0.946559190750122 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 22 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53231 0 0 1 4 39951412 39951437 mRNA hsa-miR-449b MACF1 miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA ACACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.618362790290575 1 0.974794626235962 experiment 0.76327441941885 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 1 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53232 0 0 1 4 39951407 39951437 mRNA hsa-miR-34a MACF1 miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA ACACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.618362790290575 1 0.974794626235962 experiment 0.76327441941885 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 1 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53232 0 0 1 4 39951414 39951437 mRNA hsa-miR-34c-5p MACF1 miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA ACACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.618362790290575 1 0.974794626235962 experiment 0.76327441941885 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 1 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53232 0 0 1 4 39951412 39951437 mRNA hsa-miR-449a MACF1 miRanda miRanda
14034 chr1 39951426 39951426 1 + C A MESO 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA ACACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA < 41bp 1 0.618362790290575 1 0.974794626235962 experiment 0.76327441941885 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 1 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951426 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53232 0 0 1 4 39951412 39951437 mRNA hsa-miR-449b MACF1 miRanda miRanda
14034 chr1 75229700 75229700 1 + G A OV 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACATGCCC < 41bp 1 0.465824071272781 1 0.916534423828125 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229700 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_53243 0 0 1 3 75229683 75229705 mRNA hsa-miR-34a TYW3 miRanda miRanda
14034 chr1 75229700 75229700 1 + G A OV 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACATGCCC < 41bp 1 0.465824071272781 1 0.916534423828125 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229700 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_53243 0 0 1 3 75229683 75229705 mRNA hsa-miR-449a TYW3 miRanda miRanda
14034 chr1 75229700 75229700 1 + G A OV 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACATGCCC < 41bp 1 0.465824071272781 1 0.916534423828125 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229700 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_53243 0 0 1 3 75229683 75229705 mRNA hsa-miR-449b TYW3 miRanda miRanda
14034 chr17 61661036 61661036 1 + C A OV 61661024 + 61661004 61661044 41 ACTGCTTCGCCTCTGCTGGAACAAGCAGGACCCTAACTACC ACTGCTTCGCCTCTGCTGGAACAAGCAGGACCATAACTACC < 41bp 1 0.745398692780154 1 0.991684377193451 experiment 0.509202614439693 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661024 chr17:61661036 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53245 0 0 1 2 61661020 61661046 mRNA hsa-miR-196a DCAF7 miRanda miRanda
14034 chr17 61661036 61661036 1 + C A OV 61661024 + 61661004 61661044 41 ACTGCTTCGCCTCTGCTGGAACAAGCAGGACCCTAACTACC ACTGCTTCGCCTCTGCTGGAACAAGCAGGACCATAACTACC < 41bp 1 0.745398692780154 1 0.991684377193451 experiment 0.509202614439693 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661024 chr17:61661036 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53245 0 0 1 2 61661020 61661046 mRNA hsa-miR-196b DCAF7 miRanda miRanda
14034 chr17 61661036 61661036 1 + C A OV 61661033 + 61661013 61661053 41 CCTCTGCTGGAACAAGCAGGACCCTAACTACCTGGCCACCA CCTCTGCTGGAACAAGCAGGACCATAACTACCTGGCCACCA < 41bp 1 0.362319638963859 1 0.991156160831451 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661033 chr17:61661036 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53246 0 0 1 2 61661020 61661046 mRNA hsa-miR-196a DCAF7 miRanda miRanda
14034 chr17 61661036 61661036 1 + C A OV 61661033 + 61661013 61661053 41 CCTCTGCTGGAACAAGCAGGACCCTAACTACCTGGCCACCA CCTCTGCTGGAACAAGCAGGACCATAACTACCTGGCCACCA < 41bp 1 0.362319638963859 1 0.991156160831451 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61661033 chr17:61661036 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53246 0 0 1 2 61661020 61661046 mRNA hsa-miR-196b DCAF7 miRanda miRanda
14034 chr22 35806899 35806899 1 + C A OV 35806889 + 35806869 35806909 41 TGTCCTGGGCATCCAGGTGGACACAGATGGCTCTGGTGAGT TGTCCTGGGCATCCAGGTGGACACAGATGGATCTGGTGAGT < 41bp 1 0.486630910250198 1 0.0902633666992188 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 MCM5 ENSG00000100297 CDS Human protein_coding chr22:35806889 chr22:35806899 synonymous SNV . 0 hm6A_associated_SNPs_53258 0 0 1 1 35806894 35806903 mRNA hsa-miR-106b MCM5 miRanda miRanda
14034 chr7 98935894 98935894 1 + A C OV 98935880 + 98935860 98935900 41 CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACGGACA CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACACCGGACA < 41bp 1 0.433501100996947 1 0.773165941238403 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98935880 chr7:98935894 nonsynonymous SNV 0.847 2 hm6A_associated_SNPs_53261 0 0 1 3 98935891 98935908 mRNA hsa-miR-10a ARPC1A miRanda miRanda
14034 chr7 98935894 98935894 1 + A C OV 98935880 + 98935860 98935900 41 CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACGGACA CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACACCGGACA < 41bp 1 0.433501100996947 1 0.773165941238403 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98935880 chr7:98935894 nonsynonymous SNV 0.847 2 hm6A_associated_SNPs_53261 0 0 1 3 98935891 98935908 mRNA hsa-miR-10b ARPC1A miRanda miRanda
14034 chr7 98935894 98935894 1 + A C OV 98935880 + 98935860 98935900 41 CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACGGACA CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACACCGGACA < 41bp 1 0.433501100996947 1 0.773165941238403 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98935880 chr7:98935894 nonsynonymous SNV 0.847 2 hm6A_associated_SNPs_53261 0 0 1 3 98935882 98935904 mRNA hsa-miR-455-5p ARPC1A miRanda miRanda
14034 chr15 25330556 25330556 1 + A G OV 25330575 + 25330555 25330595 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.21525191788045 1 0.707166314125061 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-18 ENSG00000206688 ncRNA_exonic Human snoRNA chr15:25330575 chr15:25330556 . . 0 hm6A_associated_SNPs_53275 0 0 0 3 25330542 25330563 mRNA hsa-miR-1 SNORD116-18 miRanda miRanda
14034 chr15 25330556 25330556 1 + A G OV 25330575 + 25330555 25330595 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.21525191788045 1 0.707166314125061 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-18 ENSG00000206688 ncRNA_exonic Human snoRNA chr15:25330575 chr15:25330556 . . 0 hm6A_associated_SNPs_53275 0 0 0 3 25330542 25330563 mRNA hsa-miR-206 SNORD116-18 miRanda miRanda
14034 chr15 25330556 25330556 1 + A G OV 25330575 + 25330555 25330595 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.21525191788045 1 0.707166314125061 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-18 ENSG00000206688 ncRNA_exonic Human snoRNA chr15:25330575 chr15:25330556 . . 0 hm6A_associated_SNPs_53275 0 0 0 3 25330544 25330563 mRNA hsa-miR-613 SNORD116-18 miRanda miRanda
14034 chr6 42610213 42610213 1 + G T OV 42610197 + 42610177 42610217 41 ATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTC ATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATTCTTC < 41bp 1 0.684974180208051 1 0.0296726226806641 experiment 0.630051639583898 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42610197 chr6:42610213 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_53334 0 0 1 1 42610203 42610219 mRNA hsa-miR-653 UBR2 miRanda miRanda
14034 chr17 34163199 34163199 1 + C A OV 34163182 + 34163162 34163202 41 AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTCTAC AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTATAC < 41bp 1 0.598796819918142 1 0.742419958114624 experiment 0.802406360163715 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 TAF15 ENSG00000172660 CDS Human other chr17:34163182 chr17:34163199 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_53335 0 0 1 2 34163177 34163199 mRNA hsa-miR-362-3p TAF15 miRanda miRanda
14034 chr17 34163199 34163199 1 + C A OV 34163182 + 34163162 34163202 41 AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTCTAC AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTATAC < 41bp 1 0.598796819918142 1 0.742419958114624 experiment 0.802406360163715 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 TAF15 ENSG00000172660 CDS Human other chr17:34163182 chr17:34163199 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_53335 0 0 1 2 34163177 34163199 mRNA hsa-miR-329 TAF15 miRanda miRanda
14034 chr2 238002825 238002825 1 + G A OV 238002815 + 238002795 238002835 41 GATTTTGCAGCCTTTGTTGGACTTCCTGTAGAAGAGGCTGT GATTTTGCAGCCTTTGTTGGACTTCCTGTAAAAGAGGCTGT < 41bp 1 0.274099719284665 1 0.941394686698914 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 COPS8 ENSG00000198612 CDS Human protein_coding chr2:238002815 chr2:238002825 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_53337 0 0 1 1 238002805 238002826 mRNA hsa-miR-139-5p COPS8 miRanda miRanda
14034 chr11 65269655 65269655 1 + C G OV 65269654 + 65269634 65269674 41 TTGGGGAAGGAAAGTATTGAACTGGGGGTTGGTCTGGCCTA TTGGGGAAGGAAAGTATTGAAGTGGGGGTTGGTCTGGCCTA Direct Loss 1 0.0790021004375376 1 0.861069321632385 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269654 chr11:65269655 . . 0 hm6A_associated_SNPs_53341 0 0 1 1 65269641 65269662 lncRNA hsa-miR-361-3p MALAT1 miRanda starBase2
14034 chr1 28815722 28815722 1 + C T OV 28815718 + 28815698 28815738 41 CCAACACCAGAAGAACTAGAACAACGCAATATATTGCAACG CCAACACCAGAAGAACTAGAACAATGCAATATATTGCAACG < 41bp 1 0.465979806168659 1 0.773879408836365 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28815718 chr1:28815722 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_53358 0 0 1 1 28815713 28815736 mRNA hsa-miR-448 PHACTR4 miRanda miRanda
14034 chr2 152296545 152296545 1 + C A OV 152296544 + 152296524 152296564 41 TTTTTGCTTTTTGATAGGTAACAAAAAAGAGAAACCAGGTT TTTTTGCTTTTTGATAGGTAAAAAAAAAGAGAAACCAGGTT Direct Loss 1 0.324449104140456 1 0.0778719782829285 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152296544 chr2:152296545 nonsynonymous SNV 0.994 4 hm6A_associated_SNPs_53359 0 0 1 1 152296544 152296565 mRNA hsa-miR-490-3p RIF1 miRanda miRanda
14034 chrX 77373618 77373618 1 + G A OV 77373610 + 77373590 77373630 41 TTTGATGAAGAAGGAGCTGAACTACTTTGCAAAGGCCTTGG TTTGATGAAGAAGGAGCTGAACTACTTTACAAAGGCCTTGG < 41bp 1 0.347643027670501 1 0.290890961885452 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 29 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373610 chrX:77373618 nonsynonymous SNV 0.993 3 hm6A_associated_SNPs_53372 0 0 1 1 77373617 77373642 mRNA hsa-miR-330-5p PGK1 miRanda miRanda
14034 chr8 124089492 124089492 1 + A G OV 124089482 + 124089462 124089502 41 AGGAAATATTTATGTTTTTGACTTACATGGAAACAGGTAAG AGGAAATATTTATGTTTTTGACTTACATGGGAACAGGTAAG < 41bp 1 0.158691164227093 1 0.591961801052094 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124089482 chr8:124089492 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_53393 0 0 1 1 124089483 124089497 mRNA hsa-miR-134 WDR67 miRanda miRanda
14034 chr1 120906225 120906225 1 + C T OV 120906233 + 120906213 120906253 41 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCT CAAGGCCATGGGTATCATGAACTCCTTCGTCAACGACATCT < 41bp 1 0.0969776016382693 1 0.999432682991028 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 HIST2H2BA ENSG00000223345 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:120906233 chr1:120906225 . . 0 hm6A_associated_SNPs_53402 0 0 0 3 120906209 120906233 mRNA hsa-miR-433 HIST2H2BA miRanda miRanda
14034 chr1 120906225 120906225 1 + C T OV 120906233 + 120906213 120906253 41 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCT CAAGGCCATGGGTATCATGAACTCCTTCGTCAACGACATCT < 41bp 1 0.0969776016382693 1 0.999432682991028 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 HIST2H2BA ENSG00000223345 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:120906233 chr1:120906225 . . 0 hm6A_associated_SNPs_53402 0 0 0 3 120906209 120906231 mRNA hsa-miR-455-5p HIST2H2BA miRanda miRanda
14034 chr1 120906225 120906225 1 + C T OV 120906233 + 120906213 120906253 41 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCT CAAGGCCATGGGTATCATGAACTCCTTCGTCAACGACATCT < 41bp 1 0.0969776016382693 1 0.999432682991028 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 HIST2H2BA ENSG00000223345 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:120906233 chr1:120906225 . . 0 hm6A_associated_SNPs_53402 0 0 0 3 120906207 120906227 mRNA hsa-miR-874 HIST2H2BA miRanda miRanda
14034 chr1 109321979 109321979 1 + G C OV 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTCACCTTTCAGGCAATGGC < 41bp 1 0.362237742857232 1 0.148390620946884 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321979 synonymous SNV . 0 hm6A_associated_SNPs_53407 0 0 0 3 109321963 109321984 mRNA hsa-miR-196a STXBP3 miRanda miRanda
14034 chr1 109321979 109321979 1 + G C OV 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTCACCTTTCAGGCAATGGC < 41bp 1 0.362237742857232 1 0.148390620946884 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321979 synonymous SNV . 0 hm6A_associated_SNPs_53407 0 0 0 3 109321961 109321982 mRNA hsa-miR-223 STXBP3 miRanda miRanda
14034 chr1 109321979 109321979 1 + G C OV 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTCACCTTTCAGGCAATGGC < 41bp 1 0.362237742857232 1 0.148390620946884 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321979 synonymous SNV . 0 hm6A_associated_SNPs_53407 0 0 0 3 109321968 109321988 mRNA hsa-miR-488 STXBP3 miRanda miRanda
14034 chr1 211486113 211486113 1 + A G OV 211486118 + 211486098 211486138 41 CAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAGAAC CAGATGTAATTGGCAGCAAGACTGTTGGCCAAGTGAAGAAC < 41bp 1 0.40863514722636 1 0.975018501281738 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 16 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486118 chr1:211486113 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_53434 0 0 1 2 211486099 211486124 mRNA hsa-miR-212 RCOR3 miRanda miRanda
14034 chr1 211486113 211486113 1 + A G OV 211486118 + 211486098 211486138 41 CAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAGAAC CAGATGTAATTGGCAGCAAGACTGTTGGCCAAGTGAAGAAC < 41bp 1 0.40863514722636 1 0.975018501281738 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 16 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486118 chr1:211486113 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_53434 0 0 1 2 211486102 211486124 mRNA hsa-miR-132 RCOR3 miRanda miRanda
14034 chr19 49517781 49517781 1 + A G OV 49517794 + 49517774 49517814 41 CATCCCCATAGACCTGCTGGACCGGCTGCTTATCGTCTCCA CATCCCCGTAGACCTGCTGGACCGGCTGCTTATCGTCTCCA < 41bp 1 0.440169525458938 1 0.97002112865448 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49517794 chr19:49517781 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53440 0 0 1 1 49517772 49517793 mRNA hsa-miR-214 RUVBL2 miRanda miRanda
14034 chr15 25327967 25327967 1 + G A OV 25327958 + 25327938 25327978 41 TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAATGAAAACTCTA < 41bp 1 0.0768506540973852 1 0.34258708357811 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SNORD116-16 ENSG00000207263 ncRNA_exonic Human snoRNA chr15:25327958 chr15:25327967 . . 0 hm6A_associated_SNPs_53450 0 0 0 1 25327966 25327986 mRNA hsa-miR-202 SNORD116-16 miRanda miRanda
14034 chr8 96057781 96057781 1 + T G OV 96057789 + 96057769 96057809 41 GTAGGAAAAAAATCTGGATGACAAAGCATATCGTAATATCA GTAGGAAAAAAAGCTGGATGACAAAGCATATCGTAATATCA < 41bp 1 0.642069470124566 1 0.9237260222435 experiment 0.715861059750869 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control 13 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96057789 chr8:96057781 nonsynonymous SNV 0.969 0 hm6A_associated_SNPs_53490 0 0 0 2 96057780 96057801 mRNA hsa-miR-190 C8orf38 miRanda miRanda
14034 chr8 96057781 96057781 1 + T G OV 96057789 + 96057769 96057809 41 GTAGGAAAAAAATCTGGATGACAAAGCATATCGTAATATCA GTAGGAAAAAAAGCTGGATGACAAAGCATATCGTAATATCA < 41bp 1 0.642069470124566 1 0.9237260222435 experiment 0.715861059750869 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control 13 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96057789 chr8:96057781 nonsynonymous SNV 0.969 0 hm6A_associated_SNPs_53490 0 0 0 2 96057780 96057801 mRNA hsa-miR-190b C8orf38 miRanda miRanda
14034 chr18 32398247 32398247 1 + G C OV 32398240 + 32398220 32398260 41 CAGGACTGCTTCTGGAGGGGACATGCCGGTGGTTCTCATAG CAGGACTGCTTCTGGAGGGGACATGCCCGTGGTTCTCATAG < 41bp 1 0.459061092491198 1 0.64303719997406 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 28 DTNA ENSG00000134769 CDS Human protein_coding chr18:32398240 chr18:32398247 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_53537 0 0 1 1 32398242 32398269 mRNA hsa-miR-138 DTNA miRanda miRanda
14034 chr17 6348467 6348467 1 + C A OV 6348450 + 6348430 6348470 41 GATGGCTTCTCGGTGGCAGAACATGGGGACCTCCGTGCGCC GATGGCTTCTCGGTGGCAGAACATGGGGACCTCCGTGAGCC < 41bp 1 0.431836555645465 1 0.985563039779663 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 38 PIMREG ENSG00000129195 CDS Human protein_coding chr17:6348450 chr17:6348467 nonsynonymous SNV 0.007 1 hm6A_associated_SNPs_53557 0 0 0 1 6348462 6348483 mRNA hsa-miR-185 FAM64A miRanda miRanda
14034 chr2 71654514 71654514 1 + C A OV 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA TTATGGAAGAAGATATAAAAACCATGATTGAAAGACACTTA < 41bp 1 0.526363646069534 1 0.954959213733673 experiment 0.947272707860932 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654514 nonsynonymous SNV 0.832 0 hm6A_associated_SNPs_53559 0 0 1 1 71654511 71654540 mRNA hsa-miR-302b ZNF638 miRanda miRanda
14034 chr2 71654514 71654514 1 + C A OV 71654534 + 71654514 71654554 41 CTAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT ATAAAAACCATGATTGAAAGACACTTAACAGGTAGATACTT < 41bp 1 0.788275327150061 1 0.898254334926605 experiment 0.423449345699877 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654534 chr2:71654514 nonsynonymous SNV 0.832 0 hm6A_associated_SNPs_53560 0 0 1 1 71654511 71654540 mRNA hsa-miR-302b ZNF638 miRanda miRanda
14034 chrX 73041192 73041192 1 - G C OV 73041193 - 73041173 73041213 41 ATATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT ATATGCTTCAAAAGAAGAGGAGTTTATTGTTCATTGTAGTT Direct Loss 1 0.39017394139036 1 0.801634132862091 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041193 chrX:73041192 . . 0 hm6A_associated_SNPs_53578 0 0 1 4 73041186 73041206 lncRNA hsa-miR-142-5p XIST miRanda starBase2
14034 chrX 73041192 73041192 1 - G C OV 73041193 - 73041173 73041213 41 ATATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT ATATGCTTCAAAAGAAGAGGAGTTTATTGTTCATTGTAGTT Direct Loss 1 0.39017394139036 1 0.801634132862091 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041193 chrX:73041192 . . 0 hm6A_associated_SNPs_53578 0 0 1 4 73041186 73041206 lncRNA hsa-miR-5590-3p XIST miRanda starBase2
14034 chrX 73041192 73041192 1 - G C OV 73041193 - 73041173 73041213 41 ATATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT ATATGCTTCAAAAGAAGAGGAGTTTATTGTTCATTGTAGTT Direct Loss 1 0.39017394139036 1 0.801634132862091 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041193 chrX:73041192 . . 0 hm6A_associated_SNPs_53578 0 0 1 4 73041191 73041212 lncRNA hsa-miR-3909 XIST miRanda starBase2
14034 chrX 73041192 73041192 1 - G C OV 73041193 - 73041173 73041213 41 ATATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT ATATGCTTCAAAAGAAGAGGAGTTTATTGTTCATTGTAGTT Direct Loss 1 0.39017394139036 1 0.801634132862091 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041193 chrX:73041192 . . 0 hm6A_associated_SNPs_53578 0 0 1 4 73041191 73041207 lncRNA hsa-miR-6852-3p XIST miRanda starBase2
14034 chr20 279267 279267 1 + G A OV 279254 + 279234 279274 41 GCTTTAAATGTGGTTCCCGGACCCACATGAGCGGCAGCTGC GCTTTAAATGTGGTTCCCGGACCCACATGAGCGACAGCTGC < 41bp 1 0.705985166202441 1 0.996270835399628 experiment 0.588029667595119 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 34 ZCCHC3 ENSG00000177764 CDS Human other chr20:279254 chr20:279267 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_53599 0 0 1 1 279253 279273 mRNA hsa-miR-22 ZCCHC3 miRanda miRanda
14034 chrX 73041840 73041840 1 - A T OV 73041830 - 73041810 73041850 41 TAAATAGATCTCTTTCAGAAACAATCCTCAGATAACGCATA TAAATAGATCACTTTCAGAAACAATCCTCAGATAACGCATA < 41bp 1 0.338052610967491 1 0.0560101866722107 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041830 chrX:73041840 . . 0 hm6A_associated_SNPs_53605 0 0 1 1 73041832 73041851 lncRNA hsa-miR-4766-5p XIST miRanda starBase2
14034 chrX 77380850 77380850 1 + G A OV 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTACCA < 41bp 1 0.654834291929799 1 0.0618344843387604 experiment 0.690331416140402 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380850 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53610 0 0 1 2 77380834 77380855 mRNA hsa-miR-96 PGK1 miRanda miRanda
14034 chrX 77380850 77380850 1 + G A OV 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTACCA < 41bp 1 0.654834291929799 1 0.0618344843387604 experiment 0.690331416140402 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380850 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53610 0 0 1 2 77380836 77380855 mRNA hsa-miR-1271 PGK1 miRanda miRanda
14034 chrX 77380850 77380850 1 + G A OV 77380860 + 77380840 77380880 41 CACTTGCTGTGCCAAATGGAACACGGAGGATAAAGTCAGCC CACTTGCTGTACCAAATGGAACACGGAGGATAAAGTCAGCC < 41bp 1 0.615977721109934 1 0.283559381961823 experiment 0.768044557780132 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380860 chrX:77380850 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53611 0 0 1 2 77380834 77380855 mRNA hsa-miR-96 PGK1 miRanda miRanda
14034 chrX 77380850 77380850 1 + G A OV 77380860 + 77380840 77380880 41 CACTTGCTGTGCCAAATGGAACACGGAGGATAAAGTCAGCC CACTTGCTGTACCAAATGGAACACGGAGGATAAAGTCAGCC < 41bp 1 0.615977721109934 1 0.283559381961823 experiment 0.768044557780132 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380860 chrX:77380850 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_53611 0 0 1 2 77380836 77380855 mRNA hsa-miR-1271 PGK1 miRanda miRanda
14034 chr1 211451555 211451555 1 + C A OV 211451566 + 211451546 211451586 41 GCTCGTAAACTAGCTAATAGACATAATCAGGGTGACAGGTA GCTCGTAAAATAGCTAATAGACATAATCAGGGTGACAGGTA < 41bp 1 0.573298946182394 1 0.0284115672111511 experiment 0.853402107635212 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211451566 chr1:211451555 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_53630 0 0 1 2 211451553 211451574 mRNA hsa-miR-190 RCOR3 miRanda miRanda
14034 chr1 211451555 211451555 1 + C A OV 211451566 + 211451546 211451586 41 GCTCGTAAACTAGCTAATAGACATAATCAGGGTGACAGGTA GCTCGTAAAATAGCTAATAGACATAATCAGGGTGACAGGTA < 41bp 1 0.573298946182394 1 0.0284115672111511 experiment 0.853402107635212 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211451566 chr1:211451555 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_53630 0 0 1 2 211451552 211451574 mRNA hsa-miR-190b RCOR3 miRanda miRanda
14034 chr10 115668208 115668208 1 + G A OV 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATAA < 41bp 1 0.653121012672653 1 0.0661668479442596 experiment 0.693757974654693 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 40 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668208 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_53649 0 0 1 1 115668192 115668213 mRNA hsa-miR-205 NHLRC2 miRanda miRanda
14034 chr8 124096429 124096429 1 + G A OV 124096433 + 124096413 124096453 41 CTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTC CTAGTTAGCTGGATGAAAGGACATGAATCATCAGTATTTTC < 41bp 1 0.569787802792283 1 0.639873623847961 experiment 0.860424394415435 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124096433 chr8:124096429 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_53671 0 0 1 1 124096429 124096451 mRNA hsa-miR-200c WDR67 miRanda miRanda
14034 chr3 9712739 9712739 1 + G T OV 9712740 + 9712720 9712760 41 TCTTTATTTCAGAAGTGGTGACACGCATCTTTTTGATAAGG TCTTTATTTCAGAAGTGGTTACACGCATCTTTTTGATAAGG Direct Loss 1 0.504831758647981 1 0.0919854938983917 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 20 MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9712740 chr3:9712739 nonsynonymous SNV 0.981 5 hm6A_associated_SNPs_53713 0 0 1 1 9712732 9712741 mRNA hsa-miR-197 MTMR14 miRanda miRanda
14034 chr2 71653702 71653702 1 + C G OV 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAGGGAAAAAGGAAAGAAAGTCTCAAAAATGTTCCTTTC Direct Loss 1 0.720042803859782 1 0.989189684391022 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 22 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653702 nonsynonymous SNV 0.948 0 hm6A_associated_SNPs_53731 0 0 1 1 71653695 71653716 mRNA hsa-miR-543 ZNF638 miRanda miRanda
14034 chrX 23803919 23803919 1 + G C OV 23803922 + 23803902 23803942 41 TCCAGTGAAGAGGGTTGGAGACTGTTCAAGATCGACAAGGA TCCAGTGAAGAGGGTTGCAGACTGTTCAAGATCGACAAGGA < 41bp 1 0.771268768510595 1 0.983945488929749 experiment 0.457462462978811 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 18 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803922 chrX:23803919 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_53737 0 0 1 2 23803908 23803928 mRNA hsa-miR-212 SAT1 miRanda miRanda
14034 chrX 23803919 23803919 1 + G C OV 23803922 + 23803902 23803942 41 TCCAGTGAAGAGGGTTGGAGACTGTTCAAGATCGACAAGGA TCCAGTGAAGAGGGTTGCAGACTGTTCAAGATCGACAAGGA < 41bp 1 0.771268768510595 1 0.983945488929749 experiment 0.457462462978811 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 18 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803922 chrX:23803919 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_53737 0 0 1 2 23803907 23803928 mRNA hsa-miR-132 SAT1 miRanda miRanda
14034 chr6 32945907 32945907 1 + G C OV 32945920 + 32945900 32945940 41 TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCA TAGCTTCCGGCAGTACATGAACAACTGGCTGCTCTGTCCCA < 41bp 1 0.572775631361371 1 0.886782288551331 experiment 0.854448737277258 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945920 chr6:32945907 nonsynonymous SNV 0.977 2 hm6A_associated_SNPs_53755 0 0 1 3 32945903 32945928 mRNA hsa-miR-199a-5p BRD2 miRanda miRanda
14034 chr6 32945907 32945907 1 + G C OV 32945920 + 32945900 32945940 41 TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCA TAGCTTCCGGCAGTACATGAACAACTGGCTGCTCTGTCCCA < 41bp 1 0.572775631361371 1 0.886782288551331 experiment 0.854448737277258 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945920 chr6:32945907 nonsynonymous SNV 0.977 2 hm6A_associated_SNPs_53755 0 0 1 3 32945903 32945928 mRNA hsa-miR-199b-5p BRD2 miRanda miRanda
14034 chr6 32945907 32945907 1 + G C OV 32945920 + 32945900 32945940 41 TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCA TAGCTTCCGGCAGTACATGAACAACTGGCTGCTCTGTCCCA < 41bp 1 0.572775631361371 1 0.886782288551331 experiment 0.854448737277258 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945920 chr6:32945907 nonsynonymous SNV 0.977 2 hm6A_associated_SNPs_53755 0 0 1 3 32945903 32945916 mRNA hsa-miR-346 BRD2 miRanda miRanda
14034 chr12 121013647 121013647 1 + T A OV 121013628 + 121013608 121013648 41 AGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGATA AGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGAAA < 41bp 1 0.688413145739548 1 0.190280884504318 experiment 0.623173708520905 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 40 RNF10 ENSG00000022840 CDS Human protein_coding chr12:121013628 chr12:121013647 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_53816 0 0 1 1 121013644 121013667 mRNA hsa-miR-873 RNF10 miRanda miRanda
14034 chr21 30698849 30698849 1 + G T OV 30698851 + 30698831 30698871 41 AATTCCAAAAAGCATTTGGAACTGACAGAGTCCGTACTGGG AATTCCAAAAAGCATTTGTAACTGACAGAGTCCGTACTGGG < 41bp 1 0.624917601429548 1 0.980627417564392 experiment 0.750164797140904 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30698851 chr21:30698849 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_53852 0 0 1 1 30698838 30698857 mRNA hsa-miR-223 BACH1 miRanda miRanda
14034 chr11 65270267 65270267 1 + C G OV 65270249 + 65270229 65270269 41 TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTG TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTAGTG < 41bp 1 0.0843122066745206 1 0.716540336608887 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270249 chr11:65270267 . 0.977 0 hm6A_associated_SNPs_53854 0 0 1 3 65270249 65270270 lncRNA hsa-miR-199a-3p MALAT1 miRanda starBase2
14034 chr11 65270267 65270267 1 + C G OV 65270249 + 65270229 65270269 41 TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTG TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTAGTG < 41bp 1 0.0843122066745206 1 0.716540336608887 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270249 chr11:65270267 . 0.977 0 hm6A_associated_SNPs_53854 0 0 1 3 65270249 65270270 lncRNA hsa-miR-199b-3p MALAT1 miRanda starBase2
14034 chr11 65270267 65270267 1 + C G OV 65270249 + 65270229 65270269 41 TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTG TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTAGTG < 41bp 1 0.0843122066745206 1 0.716540336608887 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270249 chr11:65270267 . 0.977 0 hm6A_associated_SNPs_53854 0 0 1 3 65270250 65270270 lncRNA hsa-miR-3129-5p MALAT1 miRanda starBase2
14034 chr11 65270267 65270267 1 + C G OV 65270276 + 65270256 65270296 41 GATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAA GATTCTTACTAGTGATGAGAACATTATCTGCATATGCCAAA < 41bp 1 0.144997683116264 1 0.940865874290466 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270276 chr11:65270267 . 0.977 0 hm6A_associated_SNPs_53855 0 0 1 3 65270249 65270270 lncRNA hsa-miR-199a-3p MALAT1 miRanda starBase2
14034 chr11 65270267 65270267 1 + C G OV 65270276 + 65270256 65270296 41 GATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAA GATTCTTACTAGTGATGAGAACATTATCTGCATATGCCAAA < 41bp 1 0.144997683116264 1 0.940865874290466 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270276 chr11:65270267 . 0.977 0 hm6A_associated_SNPs_53855 0 0 1 3 65270249 65270270 lncRNA hsa-miR-199b-3p MALAT1 miRanda starBase2
14034 chr11 65270267 65270267 1 + C G OV 65270276 + 65270256 65270296 41 GATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAA GATTCTTACTAGTGATGAGAACATTATCTGCATATGCCAAA < 41bp 1 0.144997683116264 1 0.940865874290466 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control|28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270276 chr11:65270267 . 0.977 0 hm6A_associated_SNPs_53855 0 0 1 3 65270250 65270270 lncRNA hsa-miR-3129-5p MALAT1 miRanda starBase2
14034 chr7 142983680 142983680 1 + G A OV 142983691 + 142983671 142983711 41 TCCAGGAGAGCCAAACTGGAACAGAGGCGAATGGCCTCAGA TCCAGGAGAACCAAACTGGAACAGAGGCGAATGGCCTCAGA < 41bp 1 0.728575848723545 1 0.995052099227905 experiment 0.54284830255291 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 TMEM139 ENSG00000178826 CDS Human protein_coding chr7:142983691 chr7:142983680 nonsynonymous SNV 0.006 1 hm6A_associated_SNPs_53859 0 0 0 1 142983665 142983691 mRNA hsa-miR-145 TMEM139 miRanda miRanda
14034 chr11 62651977 62651977 1 + C T OV 62651981 + 62651961 62652001 41 GGATGGGTTCCAGGTTCGGGACATAGAGAATCTGAAGGTGA GGATGGGTTCCAGGTTTGGGACATAGAGAATCTGAAGGTGA < 41bp 1 0.490391379299093 1 0.0155090689659119 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62651981 chr11:62651977 nonsynonymous SNV 0.397 4 hm6A_associated_SNPs_53864 0 0 1 1 62651955 62651977 mRNA hsa-miR-490-3p SLC3A2 miRanda miRanda
14034 chr14 95081364 95081364 1 + A C OV 95081371 + 95081351 95081391 41 AATCACAGATCTGATCAAGGACCTTGACTCGCAGACAATGA AATCACAGATCTGCTCAAGGACCTTGACTCGCAGACAATGA < 41bp 1 0.346790611412559 1 0.997833251953125 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 14 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081371 chr14:95081364 nonsynonymous SNV 0.007 1 hm6A_associated_SNPs_53891 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr14 95081364 95081364 1 + A C OV 95081377 + 95081357 95081397 41 AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC AGATCTGCTCAAGGACCTTGACTCGCAGACAATGATGGTCC < 41bp 1 0.201764751755229 1 0.988742828369141 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081377 chr14:95081364 nonsynonymous SNV 0.007 1 hm6A_associated_SNPs_53892 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr10 70515218 70515218 1 + C A OV 70515235 + 70515215 70515255 41 ATCCCTCTGTGTTGATTAAGACTGCTATTCGTTGTTGTAAG ATCACTCTGTGTTGATTAAGACTGCTATTCGTTGTTGTAAG < 41bp 1 0.296752855959747 1 0.939088225364685 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70515235 chr10:70515218 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_53901 0 0 1 1 70515208 70515230 mRNA hsa-miR-377 CCAR1 miRanda miRanda
14034 chr11 75718629 75718629 1 + A G OV 75718609 + 75718589 75718629 41 TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTA TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTG < 41bp 1 0.489658245758362 1 0.00408074259757996 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718609 chr11:75718629 synonymous SNV . 0 hm6A_associated_SNPs_53932 0 0 1 5 75718611 75718633 mRNA hsa-miR-146a UVRAG miRanda miRanda
14034 chr11 75718629 75718629 1 + A G OV 75718609 + 75718589 75718629 41 TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTA TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTG < 41bp 1 0.489658245758362 1 0.00408074259757996 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718609 chr11:75718629 synonymous SNV . 0 hm6A_associated_SNPs_53932 0 0 1 5 75718622 75718643 mRNA hsa-miR-320a UVRAG miRanda miRanda
14034 chr11 75718629 75718629 1 + A G OV 75718609 + 75718589 75718629 41 TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTA TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTG < 41bp 1 0.489658245758362 1 0.00408074259757996 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718609 chr11:75718629 synonymous SNV . 0 hm6A_associated_SNPs_53932 0 0 1 5 75718622 75718643 mRNA hsa-miR-320b UVRAG miRanda miRanda
14034 chr11 75718629 75718629 1 + A G OV 75718609 + 75718589 75718629 41 TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTA TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTG < 41bp 1 0.489658245758362 1 0.00408074259757996 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718609 chr11:75718629 synonymous SNV . 0 hm6A_associated_SNPs_53932 0 0 1 5 75718624 75718643 mRNA hsa-miR-320c UVRAG miRanda miRanda
14034 chr11 75718629 75718629 1 + A G OV 75718609 + 75718589 75718629 41 TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTA TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTG < 41bp 1 0.489658245758362 1 0.00408074259757996 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718609 chr11:75718629 synonymous SNV . 0 hm6A_associated_SNPs_53932 0 0 1 5 75718625 75718643 mRNA hsa-miR-320d UVRAG miRanda miRanda
14034 chr20 36488345 36488345 1 + G C OV 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGACGAGTTCTACC < 41bp 1 0.644096479758562 1 0.916187405586243 experiment 0.711807040482876 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488345 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_53958 0 0 0 6 36488337 36488358 mRNA hsa-let-7a CTNNBL1 miRanda miRanda
14034 chr20 36488345 36488345 1 + G C OV 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGACGAGTTCTACC < 41bp 1 0.644096479758562 1 0.916187405586243 experiment 0.711807040482876 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488345 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_53958 0 0 0 6 36488337 36488358 mRNA hsa-let-7b CTNNBL1 miRanda miRanda
14034 chr20 36488345 36488345 1 + G C OV 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGACGAGTTCTACC < 41bp 1 0.644096479758562 1 0.916187405586243 experiment 0.711807040482876 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488345 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_53958 0 0 0 6 36488337 36488358 mRNA hsa-let-7c CTNNBL1 miRanda miRanda
14034 chr20 36488345 36488345 1 + G C OV 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGACGAGTTCTACC < 41bp 1 0.644096479758562 1 0.916187405586243 experiment 0.711807040482876 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488345 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_53958 0 0 0 6 36488337 36488358 mRNA hsa-let-7d CTNNBL1 miRanda miRanda
14034 chr20 36488345 36488345 1 + G C OV 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGACGAGTTCTACC < 41bp 1 0.644096479758562 1 0.916187405586243 experiment 0.711807040482876 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488345 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_53958 0 0 0 6 36488337 36488358 mRNA hsa-let-7e CTNNBL1 miRanda miRanda
14034 chr20 36488345 36488345 1 + G C OV 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGACGAGTTCTACC < 41bp 1 0.644096479758562 1 0.916187405586243 experiment 0.711807040482876 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488345 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_53958 0 0 0 6 36488337 36488358 mRNA hsa-let-7f CTNNBL1 miRanda miRanda
14034 chrX 73045820 73045820 1 - C G OV 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTCGACTGTGCCAACGCTACTCCTG Direct Loss 1 0.601144750686561 1 0.429490894079208 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045820 . . 0 hm6A_associated_SNPs_53998 0 0 1 3 73045814 73045834 lncRNA hsa-miR-455-3p XIST miRanda starBase2
14034 chrX 73045820 73045820 1 - C G OV 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTCGACTGTGCCAACGCTACTCCTG Direct Loss 1 0.601144750686561 1 0.429490894079208 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045820 . . 0 hm6A_associated_SNPs_53998 0 0 1 3 73045808 73045832 lncRNA hsa-miR-1271-5p XIST miRanda starBase2
14034 chrX 73045820 73045820 1 - C G OV 73045818 - 73045798 73045838 41 GTGGCCAAATAATTTGGTGGACTGTGCCAACGCTACTCCTG GTGGCCAAATAATTTGGTCGACTGTGCCAACGCTACTCCTG Direct Loss 1 0.601144750686561 1 0.429490894079208 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045818 chrX:73045820 . . 0 hm6A_associated_SNPs_53998 0 0 1 3 73045808 73045835 lncRNA hsa-miR-96-5p XIST miRanda starBase2
14034 chr15 25327966 25327966 1 + A G OV 25327958 + 25327938 25327978 41 TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGGGTGAAAACTCTA < 41bp 1 0.079192552326712 1 0.125912845134735 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SNORD116-16 ENSG00000207263 ncRNA_exonic Human snoRNA chr15:25327958 chr15:25327966 . . 0 hm6A_associated_SNPs_54019 0 0 0 1 25327966 25327986 mRNA hsa-miR-202 SNORD116-16 miRanda miRanda
14034 chr14 22476213 22476213 1 + G A OV 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCATG < 41bp 1 0.0704414647289901 1 0.93893975019455 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476213 nonsynonymous SNV . 0 hm6A_associated_SNPs_54028 0 0 0 2 22476205 22476225 mRNA hsa-miR-196a TRAV20 miRanda miRanda
14034 chr14 22476213 22476213 1 + G A OV 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCATG < 41bp 1 0.0704414647289901 1 0.93893975019455 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 39 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476213 nonsynonymous SNV . 0 hm6A_associated_SNPs_54028 0 0 0 2 22476205 22476225 mRNA hsa-miR-196b TRAV20 miRanda miRanda
14034 chr7 98955975 98955975 1 + G T OV 98955979 + 98955959 98955999 41 TCAGGGTCTCGACTCTGAAGACAGAGTTCCTGCCGCTCCTA TCAGGGTCTCGACTCTTAAGACAGAGTTCCTGCCGCTCCTA < 41bp 1 0.763755409966066 1 0.0418986976146698 experiment 0.472489180067869 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;Control 17 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98955979 chr7:98955975 synonymous SNV . 0 hm6A_associated_SNPs_54030 0 0 1 1 98955970 98955991 mRNA hsa-miR-873 ARPC1A miRanda miRanda
14034 chr2 277055 277055 1 + A G OV 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAGAAACAACTTATTATTGAAGATCC < 41bp 1 0.716573482236009 1 0.821074426174164 experiment 0.566853035527982 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277055 synonymous SNV . 0 hm6A_associated_SNPs_54049 0 0 1 3 277050 277071 mRNA hsa-miR-374a ACP1 miRanda miRanda
14034 chr2 277055 277055 1 + A G OV 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAGAAACAACTTATTATTGAAGATCC < 41bp 1 0.716573482236009 1 0.821074426174164 experiment 0.566853035527982 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277055 synonymous SNV . 0 hm6A_associated_SNPs_54049 0 0 1 3 277045 277065 mRNA hsa-miR-382 ACP1 miRanda miRanda
14034 chr2 277055 277055 1 + A G OV 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAGAAACAACTTATTATTGAAGATCC < 41bp 1 0.716573482236009 1 0.821074426174164 experiment 0.566853035527982 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277055 synonymous SNV . 0 hm6A_associated_SNPs_54049 0 0 1 3 277050 277071 mRNA hsa-miR-374b ACP1 miRanda miRanda
14034 chr3 160120549 160120549 1 + A G OV 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CGAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA < 41bp 1 0.325336195125476 1 0.956695079803467 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 2 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120549 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_54093 0 0 1 2 160120533 160120554 mRNA hsa-miR-129-5p SMC4 miRanda miRanda
14034 chr3 160120549 160120549 1 + A G OV 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CGAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA < 41bp 1 0.325336195125476 1 0.956695079803467 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 2 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120549 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_54093 0 0 1 2 160120528 160120550 mRNA hsa-miR-218 SMC4 miRanda miRanda
14034 chr12 69995132 69995132 1 + G C OV 69995133 + 69995113 69995153 41 CACGTGCTGTCGATCTTTGGACCAGTTTCTAGCAAAGTTGT CACGTGCTGTCGATCTTTGCACCAGTTTCTAGCAAAGTTGT Direct Loss 1 0.759438263081108 1 0.358411312103271 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69995133 chr12:69995132 nonsynonymous SNV 0.948 0 hm6A_associated_SNPs_54108 0 0 1 2 69995116 69995138 mRNA hsa-miR-133a CCT2 miRanda miRanda
14034 chr12 69995132 69995132 1 + G C OV 69995133 + 69995113 69995153 41 CACGTGCTGTCGATCTTTGGACCAGTTTCTAGCAAAGTTGT CACGTGCTGTCGATCTTTGCACCAGTTTCTAGCAAAGTTGT Direct Loss 1 0.759438263081108 1 0.358411312103271 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69995133 chr12:69995132 nonsynonymous SNV 0.948 0 hm6A_associated_SNPs_54108 0 0 1 2 69995116 69995138 mRNA hsa-miR-133b CCT2 miRanda miRanda
14034 chr11 65268687 65268687 1 + T G OV 65268670 + 65268650 65268690 41 ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTT ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGGTTT < 41bp 1 0.0756123238058234 1 0.803125500679016 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 38 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268670 chr11:65268687 . . 0 hm6A_associated_SNPs_54144 0 0 1 3 65268677 65268698 lncRNA hsa-miR-200b-3p MALAT1 miRanda starBase2
14034 chr11 65268687 65268687 1 + T G OV 65268670 + 65268650 65268690 41 ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTT ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGGTTT < 41bp 1 0.0756123238058234 1 0.803125500679016 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 38 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268670 chr11:65268687 . . 0 hm6A_associated_SNPs_54144 0 0 1 3 65268676 65268698 lncRNA hsa-miR-200c-3p MALAT1 miRanda starBase2
14034 chr11 65268687 65268687 1 + T G OV 65268670 + 65268650 65268690 41 ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTT ATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGGTTT < 41bp 1 0.0756123238058234 1 0.803125500679016 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 38 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268670 chr11:65268687 . . 0 hm6A_associated_SNPs_54144 0 0 1 3 65268677 65268698 lncRNA hsa-miR-429 MALAT1 miRanda starBase2
14034 chr15 25330584 25330584 1 + G T OV 25330575 + 25330555 25330595 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCTTGGAAAGCTGAACAAAATGATTGAAAACTCTA < 41bp 1 0.204967616712462 1 0.814367532730103 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SNORD116-18 ENSG00000206688 ncRNA_exonic Human snoRNA chr15:25330575 chr15:25330584 . . 0 hm6A_associated_SNPs_54172 0 0 0 1 25330583 25330603 mRNA hsa-miR-202 SNORD116-18 miRanda miRanda
14034 chr9 32418431 32418431 1 + G T OV 32418447 + 32418427 32418467 41 GGATGGATATTATTACCCAGACAGCCTCGTGGGCACAGACT GGATTGATATTATTACCCAGACAGCCTCGTGGGCACAGACT < 41bp 1 0.573974271689816 1 0.0099322497844696 experiment 0.852051456620368 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 5 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32418447 chr9:32418431 stopgain 0.998 1 hm6A_associated_SNPs_54193 0 0 0 1 32418431 32418455 mRNA hsa-miR-485-5p ACO1 miRanda miRanda
14034 chr5 7885939 7885939 1 + G A OV 7885953 + 7885933 7885973 41 CCTTTTGAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA CCTTTTAAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA < 41bp 1 0.490643610295267 1 0.952211141586304 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 MTRR ENSG00000124275 CDS Human protein_coding chr5:7885953 chr5:7885939 synonymous SNV . 0 hm6A_associated_SNPs_54211 0 0 1 2 7885933 7885955 mRNA hsa-miR-346 MTRR miRanda miRanda
14034 chr5 7885939 7885939 1 + G A OV 7885953 + 7885933 7885973 41 CCTTTTGAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA CCTTTTAAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA < 41bp 1 0.490643610295267 1 0.952211141586304 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 MTRR ENSG00000124275 CDS Human protein_coding chr5:7885953 chr5:7885939 synonymous SNV . 0 hm6A_associated_SNPs_54211 0 0 1 2 7885938 7885959 mRNA hsa-miR-599 MTRR miRanda miRanda
14034 chr5 7885940 7885940 1 + A T OV 7885953 + 7885933 7885973 41 CCTTTTGAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA CCTTTTGTAAATAAAGGCAGACACAAAGAAGAAAGGTAACA < 41bp 1 0.490177262620284 1 0.950697541236877 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 8 MTRR ENSG00000124275 CDS Human protein_coding chr5:7885953 chr5:7885940 stopgain 0.063 0 hm6A_associated_SNPs_54212 0 0 1 2 7885933 7885955 mRNA hsa-miR-346 MTRR miRanda miRanda
14034 chr5 7885940 7885940 1 + A T OV 7885953 + 7885933 7885973 41 CCTTTTGAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA CCTTTTGTAAATAAAGGCAGACACAAAGAAGAAAGGTAACA < 41bp 1 0.490177262620284 1 0.950697541236877 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 8 MTRR ENSG00000124275 CDS Human protein_coding chr5:7885953 chr5:7885940 stopgain 0.063 0 hm6A_associated_SNPs_54212 0 0 1 2 7885938 7885959 mRNA hsa-miR-599 MTRR miRanda miRanda
14034 chrX 118587010 118587010 1 + T C OV 118587001 + 118586981 118587021 41 AAGTTCTTCAAAACGAGAAAACCGAAGCCTAAAAAACCAAC AAGTTCTTCAAAACGAGAAAACCGAAGCCCAAAAAACCAAC < 41bp 1 0.637284910746269 1 0.838055729866028 experiment 0.725430178507463 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587001 chrX:118587010 synonymous SNV . 0 hm6A_associated_SNPs_54222 0 0 1 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chrX 118587010 118587010 1 + T C OV 118587016 + 118586996 118587036 41 AGAAAACCGAAGCCTAAAAAACCAACTCTATAAAATGGAAT AGAAAACCGAAGCCCAAAAAACCAACTCTATAAAATGGAAT < 41bp 1 0.721753111437688 1 0.953216075897217 experiment 0.556493777124624 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 15 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587016 chrX:118587010 synonymous SNV . 0 hm6A_associated_SNPs_54223 0 0 1 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chr2 55462680 55462680 1 + G C OV 55462698 + 55462678 55462718 41 CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA CTCACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA < 41bp 1 0.721087345774868 1 0.421396732330322 experiment 0.557825308450263 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462698 chr2:55462680 synonymous SNV . 0 hm6A_associated_SNPs_54230 0 0 1 3 55462665 55462685 mRNA hsa-miR-224 RPS27A miRanda miRanda
14034 chr2 55462680 55462680 1 + G C OV 55462698 + 55462678 55462718 41 CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA CTCACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA < 41bp 1 0.721087345774868 1 0.421396732330322 experiment 0.557825308450263 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462698 chr2:55462680 synonymous SNV . 0 hm6A_associated_SNPs_54230 0 0 1 3 55462672 55462693 mRNA hsa-miR-494 RPS27A miRanda miRanda
14034 chr2 55462680 55462680 1 + G C OV 55462698 + 55462678 55462718 41 CTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA CTCACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTA < 41bp 1 0.721087345774868 1 0.421396732330322 experiment 0.557825308450263 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 3 RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462698 chr2:55462680 synonymous SNV . 0 hm6A_associated_SNPs_54230 0 0 1 3 55462677 55462697 mRNA hsa-miR-653 RPS27A miRanda miRanda
14034 chr11 108142067 108142067 1 + G T OV 108142085 + 108142065 108142105 41 AAGCAATATGGACTCTGAGAACACAAGGGATGCTCAAGGAC AATCAATATGGACTCTGAGAACACAAGGGATGCTCAAGGAC < 41bp 1 0.460074343160384 1 0.920454740524292 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 ATM ENSG00000149311 CDS Human protein_coding chr11:108142085 chr11:108142067 nonsynonymous SNV 0.924 0 hm6A_associated_SNPs_54231 0 0 1 1 108142051 108142073 mRNA hsa-miR-137 ATM miRanda miRanda
14034 chr15 51233907 51233907 1 + G T OV 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGTCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT < 41bp 1 0.790815006810458 1 0.0726949274539948 experiment 0.418369986379084 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233907 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_54258 0 0 1 2 51233892 51233914 mRNA hsa-miR-335 AP4E1 miRanda miRanda
14034 chr15 51233907 51233907 1 + G T OV 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGTCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT < 41bp 1 0.790815006810458 1 0.0726949274539948 experiment 0.418369986379084 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233907 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_54258 0 0 1 2 51233898 51233918 mRNA hsa-miR-653 AP4E1 miRanda miRanda
14034 chr22 38168653 38168653 1 + C G OV 38168668 + 38168648 38168688 41 TGGAGCTGAGCCACATCAAGACACGGTCTGAGCGGGAGATC TGGAGGTGAGCCACATCAAGACACGGTCTGAGCGGGAGATC < 41bp 1 0.54010041533125 1 0.973610162734985 experiment 0.9197991693375 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38168668 chr22:38168653 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_54297 0 0 1 2 38168639 38168660 mRNA hsa-miR-24 TRIOBP miRanda miRanda
14034 chr22 38168653 38168653 1 + C G OV 38168668 + 38168648 38168688 41 TGGAGCTGAGCCACATCAAGACACGGTCTGAGCGGGAGATC TGGAGGTGAGCCACATCAAGACACGGTCTGAGCGGGAGATC < 41bp 1 0.54010041533125 1 0.973610162734985 experiment 0.9197991693375 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 6 TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38168668 chr22:38168653 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_54297 0 0 1 2 38168649 38168673 mRNA hsa-miR-187 TRIOBP miRanda miRanda
14034 chr9 102713531 102713531 1 + C A OV 102713525 + 102713505 102713545 41 AGCAATTTAATGATGAAGAAACTTTGCTACAGCCTCCTTTG AGCAATTTAATGATGAAGAAACTTTGATACAGCCTCCTTTG < 41bp 1 0.36102644911753 1 0.998352408409119 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 STX17 ENSG00000136874 CDS Human protein_coding chr9:102713525 chr9:102713531 nonsynonymous SNV 0.814 0 hm6A_associated_SNPs_54303 0 0 0 1 102713520 102713541 mRNA hsa-miR-485-5p STX17 miRanda miRanda
14034 chr11 117034492 117034492 1 + G C OV 117034507 + 117034487 117034527 41 TCATTGTTGTCTGGGTAGGAACAAATAACCACGAAAATACA TCATTCTTGTCTGGGTAGGAACAAATAACCACGAAAATACA < 41bp 1 0.624410196570823 1 0.104263633489609 experiment 0.751179606858355 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117034507 chr11:117034492 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_54306 0 0 1 1 117034490 117034511 mRNA hsa-miR-375 PAFAH1B2 miRanda miRanda
14034 chr15 40684206 40684206 1 + G A OV 40684195 + 40684175 40684215 41 AGCTGAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAG AGCTGAAGCTTTTTAACGAAACAGCCAAAAAACAGATGGAG < 41bp 1 0.501352858693018 1 0.0276864767074585 experiment 0.997294282613963 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 32 KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40684195 chr15:40684206 synonymous SNV . 0 hm6A_associated_SNPs_54309 0 0 1 1 40684191 40684206 mRNA hsa-miR-129-5p C15orf23 miRanda miRanda
14034 chr21 33036135 33036135 1 + C A OV 33036144 + 33036124 33036164 41 GTGTGGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGG GTGTGGGGAAGAATTAAAGGACTGACTGAAGGCCTGCATGG < 41bp 1 0.759021794039727 1 0.911496520042419 experiment 0.481956411920545 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33036144 chr21:33036135 nonsynonymous SNV 0.002 1 hm6A_associated_SNPs_54318 0 0 1 1 33036120 33036140 mRNA hsa-miR-155 SOD1 miRanda miRanda
14034 chr21 33036135 33036135 1 + C A OV 33036148 + 33036128 33036168 41 GGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTC GGGGAAGAATTAAAGGACTGACTGAAGGCCTGCATGGATTC < 41bp 1 0.629959799529174 1 0.508603751659393 experiment 0.740080400941651 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 8 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33036148 chr21:33036135 nonsynonymous SNV 0.002 1 hm6A_associated_SNPs_54319 0 0 1 1 33036120 33036140 mRNA hsa-miR-155 SOD1 miRanda miRanda
14034 chr1 172522455 172522455 1 + T A OV 172522474 + 172522454 172522494 41 TTACCTATTTCTCCAAAAGAACATAAATTAAAAGATGATTC TAACCTATTTCTCCAAAAGAACATAAATTAAAAGATGATTC < 41bp 1 0.465180296685256 1 0.628473222255707 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 2 SUCO ENSG00000094975 CDS Human protein_coding chr1:172522474 chr1:172522455 stopgain 0.915 0 hm6A_associated_SNPs_54322 0 0 1 1 172522446 172522467 mRNA hsa-miR-539 C1orf9 miRanda miRanda
14034 chr5 76331507 76331507 1 + G C OV 76331518 + 76331498 76331538 41 CTTACCCTGGTACCGATAGAACAGAAAATGTTAAATATAGA CTTACCCTGCTACCGATAGAACAGAAAATGTTAAATATAGA < 41bp 1 0.544915954012239 1 0.974316954612732 experiment 0.910168091975521 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331518 chr5:76331507 nonsynonymous SNV 0.061 0 hm6A_associated_SNPs_54348 0 0 1 1 76331492 76331515 mRNA hsa-miR-487b AGGF1 miRanda miRanda
14034 chr6 151358171 151358171 1 + G A OV 151358162 + 151358142 151358182 41 TTCTCTATCTCACCAACCTGACAAAAAAGGTGTGCCAAGGG TTCTCTATCTCACCAACCTGACAAAAAAGATGTGCCAAGGG < 41bp 1 0.678428959508568 1 0.822737514972687 experiment 0.643142080982865 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 30 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151358162 chr6:151358171 nonsynonymous SNV 0.596 4 hm6A_associated_SNPs_54353 0 0 0 2 151358161 151358180 mRNA hsa-miR-96 MTHFD1L miRanda miRanda
14034 chr6 151358171 151358171 1 + G A OV 151358162 + 151358142 151358182 41 TTCTCTATCTCACCAACCTGACAAAAAAGGTGTGCCAAGGG TTCTCTATCTCACCAACCTGACAAAAAAGATGTGCCAAGGG < 41bp 1 0.678428959508568 1 0.822737514972687 experiment 0.643142080982865 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 30 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151358162 chr6:151358171 nonsynonymous SNV 0.596 4 hm6A_associated_SNPs_54353 0 0 0 2 151358159 151358180 mRNA hsa-miR-1271 MTHFD1L miRanda miRanda
14034 chrX 155255047 155255047 1 + C T OV 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGGCTCTATGACACCTTCCCCCCCAGACCCA < 41bp 1 0.354828439255897 1 0.981948673725128 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255047 . . 0 hm6A_associated_SNPs_54365 0 0 1 2 155255040 155255058 mRNA hsa-miR-18a WASH6P miRanda miRanda
14034 chrX 155255047 155255047 1 + C T OV 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGGCTCTATGACACCTTCCCCCCCAGACCCA < 41bp 1 0.354828439255897 1 0.981948673725128 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255047 . . 0 hm6A_associated_SNPs_54365 0 0 1 2 155255040 155255058 mRNA hsa-miR-18b WASH6P miRanda miRanda
14034 chr2 173431632 173431632 1 + C G OV 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTGTCCCGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.220682868656765 1 0.836832523345947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 14 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431632 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_54512 0 0 1 3 173431630 173431651 mRNA hsa-miR-26a PDK1 miRanda miRanda
14034 chr2 173431632 173431632 1 + C G OV 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTGTCCCGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.220682868656765 1 0.836832523345947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 14 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431632 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_54512 0 0 1 3 173431628 173431651 mRNA hsa-miR-26b PDK1 miRanda miRanda
14034 chr2 173431632 173431632 1 + C G OV 173431639 + 173431619 173431659 41 TATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA TATTATATTAACTGTCCCGAACTAGAACTTGAAGAACTAAA < 41bp 1 0.220682868656765 1 0.836832523345947 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 14 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173431639 chr2:173431632 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_54512 0 0 1 3 173431615 173431636 mRNA hsa-miR-185 PDK1 miRanda miRanda
14034 chr2 201680198 201680198 1 + G A OV 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATAC < 41bp 1 0.72376123254541 1 0.894233822822571 experiment 0.55247753490918 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680198 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_54555 0 0 1 4 201680180 201680203 mRNA hsa-miR-217 BZW1 miRanda miRanda
14034 chr2 201680198 201680198 1 + G A OV 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATAC < 41bp 1 0.72376123254541 1 0.894233822822571 experiment 0.55247753490918 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680198 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_54555 0 0 1 4 201680180 201680201 mRNA hsa-miR-153 BZW1 miRanda miRanda
14034 chr2 201680198 201680198 1 + G A OV 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATAC < 41bp 1 0.72376123254541 1 0.894233822822571 experiment 0.55247753490918 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680198 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_54555 0 0 1 4 201680179 201680201 mRNA hsa-miR-448 BZW1 miRanda miRanda
14034 chr2 201680198 201680198 1 + G A OV 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATAC < 41bp 1 0.72376123254541 1 0.894233822822571 experiment 0.55247753490918 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680198 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_54555 0 0 1 4 201680182 201680204 mRNA hsa-miR-544 BZW1 miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280784 74280806 mRNA hsa-miR-15a ALB miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280783 74280803 mRNA hsa-miR-16 ALB miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280794 74280818 mRNA hsa-miR-182 ALB miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280782 74280803 mRNA hsa-miR-15b ALB miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280784 74280803 mRNA hsa-miR-195 ALB miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280782 74280803 mRNA hsa-miR-424 ALB miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280801 74280821 mRNA hsa-miR-431 ALB miRanda miRanda
14034 chr4 74280801 74280801 1 + C T OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGTTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.44233808313593 1 0.0503191351890564 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280801 synonymous SNV . 0 hm6A_associated_SNPs_54559 0 0 1 8 74280785 74280806 mRNA hsa-miR-497 ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280784 74280806 mRNA hsa-miR-15a ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280783 74280803 mRNA hsa-miR-16 ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280794 74280818 mRNA hsa-miR-182 ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280782 74280803 mRNA hsa-miR-15b ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280784 74280803 mRNA hsa-miR-195 ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280782 74280803 mRNA hsa-miR-424 ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280801 74280821 mRNA hsa-miR-431 ALB miRanda miRanda
14034 chr4 74280802 74280802 1 + T G OV 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCGGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG < 41bp 1 0.409428134203482 1 0.106066465377808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 4 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280802 nonsynonymous SNV 0.314 3 hm6A_associated_SNPs_54561 0 0 1 8 74280785 74280806 mRNA hsa-miR-497 ALB miRanda miRanda
14034 chr9 135555005 135555005 1 + G A OV 135555010 + 135554990 135555030 41 CGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAA CGTGAGCCAATGGAAAAGAAACTCCTGGAAATCCAAGGGAA < 41bp 1 0.78281607354544 1 0.997699916362762 experiment 0.434367852909121 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135555010 chr9:135555005 nonsynonymous SNV 0.953 2 hm6A_associated_SNPs_54572 0 0 1 1 135555003 135555024 mRNA hsa-miR-876-5p GTF3C4 miRanda miRanda
14034 chr20 29632714 29632714 1 + C A OV 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTATGGACAGGTAGCTATTTATTTACT < 41bp 1 0.357590407639951 1 0.0128940343856812 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632714 nonsynonymous SNV 0.803 3 hm6A_associated_SNPs_54575 0 0 0 2 29632710 29632721 mRNA hsa-miR-378 FRG1B miRanda miRanda
14034 chr20 29632714 29632714 1 + C A OV 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTATGGACAGGTAGCTATTTATTTACT < 41bp 1 0.357590407639951 1 0.0128940343856812 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 17 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632714 nonsynonymous SNV 0.803 3 hm6A_associated_SNPs_54575 0 0 0 2 29632709 29632721 mRNA hsa-miR-422a FRG1B miRanda miRanda
14034 chr10 27459095 27459095 1 + G C OV 27459097 + 27459077 27459117 41 GTTTCTTGGGAAGCAGTAGAACTGGATGTAAATAATATAAA GTTTCTTGGGAAGCAGTACAACTGGATGTAAATAATATAAA Direct Loss 1 0.744856772362613 1 0.928590416908264 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 19 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459097 chr10:27459095 nonsynonymous SNV 0.911 0 hm6A_associated_SNPs_54579 0 0 1 1 27459074 27459103 mRNA hsa-miR-145 MASTL miRanda miRanda
14034 chr4 140625270 140625270 1 + A T OV 140625284 + 140625264 140625304 41 GACCTCAATATTGCCAAGAAACTGAGGCGGCAATTCTAACT GACCTCTATATTGCCAAGAAACTGAGGCGGCAATTCTAACT < 41bp 1 0.222760756721149 1 0.945071995258331 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 MGST2 ENSG00000085871 CDS Human protein_coding chr4:140625284 chr4:140625270 nonsynonymous SNV 0.424 1 hm6A_associated_SNPs_54587 0 0 1 3 140625259 140625281 mRNA hsa-miR-96 MGST2 miRanda miRanda
14034 chr4 140625270 140625270 1 + A T OV 140625284 + 140625264 140625304 41 GACCTCAATATTGCCAAGAAACTGAGGCGGCAATTCTAACT GACCTCTATATTGCCAAGAAACTGAGGCGGCAATTCTAACT < 41bp 1 0.222760756721149 1 0.945071995258331 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 MGST2 ENSG00000085871 CDS Human protein_coding chr4:140625284 chr4:140625270 nonsynonymous SNV 0.424 1 hm6A_associated_SNPs_54587 0 0 1 3 140625260 140625281 mRNA hsa-miR-182 MGST2 miRanda miRanda
14034 chr4 140625270 140625270 1 + A T OV 140625284 + 140625264 140625304 41 GACCTCAATATTGCCAAGAAACTGAGGCGGCAATTCTAACT GACCTCTATATTGCCAAGAAACTGAGGCGGCAATTCTAACT < 41bp 1 0.222760756721149 1 0.945071995258331 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 7 MGST2 ENSG00000085871 CDS Human protein_coding chr4:140625284 chr4:140625270 nonsynonymous SNV 0.424 1 hm6A_associated_SNPs_54587 0 0 1 3 140625260 140625281 mRNA hsa-miR-1271 MGST2 miRanda miRanda
14034 chr1 54670856 54670856 1 + C A OV 54670840 + 54670820 54670860 41 CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCACAAG < 41bp 1 0.223003965016603 1 0.925225019454956 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670840 chr1:54670856 nonsynonymous SNV 0.990 4 hm6A_associated_SNPs_54592 0 0 1 2 54670843 54670863 mRNA hsa-miR-326 MRPL37 miRanda miRanda
14034 chr1 54670856 54670856 1 + C A OV 54670840 + 54670820 54670860 41 CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCACAAG < 41bp 1 0.223003965016603 1 0.925225019454956 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670840 chr1:54670856 nonsynonymous SNV 0.990 4 hm6A_associated_SNPs_54592 0 0 1 2 54670834 54670856 mRNA hsa-miR-876-5p MRPL37 miRanda miRanda
14034 chr6 161513105 161513105 1 + A G OV 161513097 + 161513077 161513117 41 GTTTAGACAGAAGATAGGAGACAAATATATAAGCTTTGCCC GTTTAGACAGAAGATAGGAGACAAATATGTAAGCTTTGCCC < 41bp 1 0.673188099682975 1 0.179735630750656 experiment 0.65362380063405 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 29 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161513097 chr6:161513105 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_54593 0 0 1 2 161513094 161513112 mRNA hsa-miR-21 MAP3K4 miRanda miRanda
14034 chr6 161513105 161513105 1 + A G OV 161513097 + 161513077 161513117 41 GTTTAGACAGAAGATAGGAGACAAATATATAAGCTTTGCCC GTTTAGACAGAAGATAGGAGACAAATATGTAAGCTTTGCCC < 41bp 1 0.673188099682975 1 0.179735630750656 experiment 0.65362380063405 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 29 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161513097 chr6:161513105 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_54593 0 0 1 2 161513091 161513112 mRNA hsa-miR-590-5p MAP3K4 miRanda miRanda
14034 chr17 57270942 57270942 1 + C G PAAD 57270953 + 57270933 57270973 41 CGTTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC CGTTCTGATGACCCCTGGAGACTCCAAAGCTGTGCTTCCTC < 41bp 1 0.129413312913693 1 0.320761680603027 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270953 chr17:57270942 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_54611 0 0 1 1 57270922 57270943 mRNA hsa-miR-383 PRR11 miRanda miRanda
14034 chr17 57270937 57270937 1 + C T PAAD 57270953 + 57270933 57270973 41 CGTTCTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC CGTTTTGATCACCCCTGGAGACTCCAAAGCTGTGCTTCCTC < 41bp 1 0.141261139752503 1 0.323401510715485 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270953 chr17:57270937 synonymous SNV . 0 hm6A_associated_SNPs_54613 0 0 1 1 57270922 57270943 mRNA hsa-miR-383 PRR11 miRanda miRanda
14034 chr17 34147406 34147406 1 + C T PAAD 34147412 + 34147392 34147432 41 CAACCATATAATAACCAGGGACAGCAGCAAAACATGGAATC CAACCATATAATAATCAGGGACAGCAGCAAAACATGGAATC < 41bp 1 0.6529599612273 1 0.857950627803802 experiment 0.694080077545399 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 15 TAF15 ENSG00000172660 CDS Human other chr17:34147412 chr17:34147406 nonsynonymous SNV . 0 hm6A_associated_SNPs_54675 0 0 1 2 34147406 34147425 mRNA hsa-miR-129-5p TAF15 miRanda miRanda
14034 chr17 34147406 34147406 1 + C T PAAD 34147412 + 34147392 34147432 41 CAACCATATAATAACCAGGGACAGCAGCAAAACATGGAATC CAACCATATAATAATCAGGGACAGCAGCAAAACATGGAATC < 41bp 1 0.6529599612273 1 0.857950627803802 experiment 0.694080077545399 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 15 TAF15 ENSG00000172660 CDS Human other chr17:34147412 chr17:34147406 nonsynonymous SNV . 0 hm6A_associated_SNPs_54675 0 0 1 2 34147399 34147420 mRNA hsa-miR-370 TAF15 miRanda miRanda
14034 chr1 38483358 38483358 1 + A C PAAD 38483355 + 38483335 38483375 41 TTTAGTGACTACCGTAAAAAACAAGAATACCTCAAAGCTCT TTTAGTGACTACCGTAAAAAACACGAATACCTCAAAGCTCT < 41bp 1 0.585328776867809 1 0.267449587583542 experiment 0.829342446264383 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 UTP11 ENSG00000183520 CDS Human protein_coding chr1:38483355 chr1:38483358 nonsynonymous SNV 0.966 3 hm6A_associated_SNPs_54703 0 0 1 1 38483349 38483368 mRNA hsa-miR-202 UTP11L miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTTCAAACAAG < 41bp 1 0.418935066582564 1 0.911952614784241 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272161 . . 0 hm6A_associated_SNPs_54710 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTTCAAACAAG < 41bp 1 0.418935066582564 1 0.911952614784241 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272161 . . 0 hm6A_associated_SNPs_54710 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTTCAAACAAG < 41bp 1 0.418935066582564 1 0.911952614784241 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272161 . . 0 hm6A_associated_SNPs_54710 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTTCAAACAAG < 41bp 1 0.418935066582564 1 0.911952614784241 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272161 . . 0 hm6A_associated_SNPs_54710 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTTCAAACAAG < 41bp 1 0.418935066582564 1 0.911952614784241 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272161 . . 0 hm6A_associated_SNPs_54710 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272149 + 65272129 65272169 41 ATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAG ATGCAACCTTAAAATCAGTGACAAGAAACATTTCAAACAAG < 41bp 1 0.418935066582564 1 0.911952614784241 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272149 chr11:65272161 . . 0 hm6A_associated_SNPs_54710 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTTCAAACAAGCAACAGT < 41bp 1 0.19920528974191 1 0.95639967918396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272161 . . 0 hm6A_associated_SNPs_54711 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTTCAAACAAGCAACAGT < 41bp 1 0.19920528974191 1 0.95639967918396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272161 . . 0 hm6A_associated_SNPs_54711 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTTCAAACAAGCAACAGT < 41bp 1 0.19920528974191 1 0.95639967918396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272161 . . 0 hm6A_associated_SNPs_54711 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTTCAAACAAGCAACAGT < 41bp 1 0.19920528974191 1 0.95639967918396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272161 . . 0 hm6A_associated_SNPs_54711 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTTCAAACAAGCAACAGT < 41bp 1 0.19920528974191 1 0.95639967918396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272161 . . 0 hm6A_associated_SNPs_54711 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272156 + 65272136 65272176 41 CTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGT CTTAAAATCAGTGACAAGAAACATTTCAAACAAGCAACAGT < 41bp 1 0.19920528974191 1 0.95639967918396 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272156 chr11:65272161 . . 0 hm6A_associated_SNPs_54711 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTTCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.169970807503598 1 0.888578414916992 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272161 . . 0 hm6A_associated_SNPs_54712 0 0 1 6 65272142 65272163 mRNA hsa-miR-1 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTTCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.169970807503598 1 0.888578414916992 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272161 . . 0 hm6A_associated_SNPs_54712 0 0 1 6 65272142 65272163 mRNA hsa-miR-206 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTTCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.169970807503598 1 0.888578414916992 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272161 . . 0 hm6A_associated_SNPs_54712 0 0 1 6 65272144 65272163 mRNA hsa-miR-613 MALAT1 miRanda miRanda
14034 chr11 65272161 65272161 1 + C T PAAD 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTTCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.169970807503598 1 0.888578414916992 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272161 . . 0 hm6A_associated_SNPs_54712 0 0 1 6 65272142 65272163 lncRNA hsa-miR-1-3p MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTTCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.169970807503598 1 0.888578414916992 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272161 . . 0 hm6A_associated_SNPs_54712 0 0 1 6 65272142 65272163 lncRNA hsa-miR-206 MALAT1 miRanda starBase2
14034 chr11 65272161 65272161 1 + C T PAAD 65272165 + 65272145 65272185 41 AGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAA AGTGACAAGAAACATTTCAAACAAGCAACAGTCTTCAAGAA < 41bp 1 0.169970807503598 1 0.888578414916992 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272165 chr11:65272161 . . 0 hm6A_associated_SNPs_54712 0 0 1 6 65272144 65272163 lncRNA hsa-miR-613 MALAT1 miRanda starBase2
14034 chr14 60591135 60591135 1 + C A PAAD 60591144 + 60591124 60591164 41 CATAATTGATTCTCATGAAAACTTAAAAGAATTTAAAGGTG CATAATTGATTATCATGAAAACTTAAAAGAATTTAAAGGTG < 41bp 1 0.738435036164163 1 0.924066662788391 experiment 0.523129927671673 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591144 chr14:60591135 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_54714 0 0 1 1 60591121 60591142 mRNA hsa-miR-433 C14orf135 miRanda miRanda
14034 chr2 106509467 106509467 1 + G A PAAD 106509478 + 106509458 106509498 41 CCTTAAAGCGTCAGGGAAGAACAAACACTTCAAGGTGCAGC CCTTAAAGCATCAGGGAAGAACAAACACTTCAAGGTGCAGC < 41bp 1 0.797490492443042 1 0.932202637195587 experiment 0.405019015113915 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 NCK2 ENSG00000071051 CDS Human protein_coding chr2:106509478 chr2:106509467 synonymous SNV . 0 hm6A_associated_SNPs_54793 0 0 1 1 106509464 106509482 mRNA hsa-miR-375 NCK2 miRanda miRanda
14034 chr5 130721245 130721245 1 + C T PAAD 130721255 + 130721235 130721275 41 GAAAAGGCGACGGCGGATTGACAGAAGTATGATTGGAGAGC GAAAAGGCGATGGCGGATTGACAGAAGTATGATTGGAGAGC < 41bp 1 0.331907888887677 1 0.0687350332736969 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130721255 chr5:130721245 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_54795 0 0 1 2 130721236 130721245 mRNA hsa-miR-204 CDC42SE2 miRanda miRanda
14034 chr5 130721245 130721245 1 + C T PAAD 130721255 + 130721235 130721275 41 GAAAAGGCGACGGCGGATTGACAGAAGTATGATTGGAGAGC GAAAAGGCGATGGCGGATTGACAGAAGTATGATTGGAGAGC < 41bp 1 0.331907888887677 1 0.0687350332736969 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130721255 chr5:130721245 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_54795 0 0 1 2 130721236 130721245 mRNA hsa-miR-211 CDC42SE2 miRanda miRanda
14034 chr17 56772420 56772420 1 + G A PAAD 56772413 + 56772393 56772433 41 AAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC AAGAAGTGTACAGCACTGGAACTTCTTAAGCAGGAGCATAC < 41bp 1 0.65387235607352 1 0.8127601146698 experiment 0.692255287852961 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772413 chr17:56772420 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_54797 1 0 1 1 56772406 56772427 mRNA hsa-miR-370 RAD51C miRanda miRanda
14034 chr1 11718605 11718605 1 + C A PAAD 11718616 + 11718596 11718636 41 CCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT CCTCAAGTCACAGGTGGTGGACCTCAAGGCCGAAGGGTATT < 41bp 1 0.107982301507462 1 0.832386612892151 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718616 chr1:11718605 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_54807 0 0 1 2 11718589 11718609 mRNA hsa-miR-378 FBXO44 miRanda miRanda
14034 chr1 11718605 11718605 1 + C A PAAD 11718616 + 11718596 11718636 41 CCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT CCTCAAGTCACAGGTGGTGGACCTCAAGGCCGAAGGGTATT < 41bp 1 0.107982301507462 1 0.832386612892151 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 10 FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718616 chr1:11718605 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_54807 0 0 1 2 11718588 11718609 mRNA hsa-miR-422a FBXO44 miRanda miRanda
14034 chr16 58550529 58550529 1 + C A PAAD 58550538 + 58550518 58550558 41 CTCAGGGTTCGCTCCCTAGAACTCTACCACCAGCTGGTGGC CTCAGGGTTCGATCCCTAGAACTCTACCACCAGCTGGTGGC < 41bp 1 0.470346262090214 1 0.973480105400085 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550538 chr16:58550529 synonymous SNV . 0 hm6A_associated_SNPs_54812 0 0 1 1 58550529 58550552 mRNA hsa-miR-138 SETD6 miRanda miRanda
14034 chrX 149809786 149809786 1 + C A PAAD 149809800 + 149809780 149809820 41 TAAGTGCTATGAGCTCTGTGACACTTACCCTGCTCTTTTGG TAAGTGATATGAGCTCTGTGACACTTACCCTGCTCTTTTGG < 41bp 1 0.524393005787278 1 0.828960597515106 experiment 0.951213988425443 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149809800 chrX:149809786 stopgain 1.000 1 hm6A_associated_SNPs_54842 0 0 0 1 149809785 149809808 mRNA hsa-miR-142-3p MTM1 miRanda miRanda
14034 chr2 182781142 182781142 1 + G T PAAD 182781132 + 182781112 182781152 41 AGTATTACATGATATTAGAAACTCACTGCAGAATCTTTCAC AGTATTACATGATATTAGAAACTCACTGCATAATCTTTCAC < 41bp 1 0.710953287487714 1 0.72606235742569 experiment 0.578093425024572 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 31 SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182781132 chr2:182781142 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_54863 0 0 1 1 182781119 182781145 mRNA hsa-miR-544 SSFA2 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-302a TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-302b TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-302c TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-302d TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-372 TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-373 TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517527 73517547 mRNA hsa-miR-520e TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-520a-3p TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517527 73517547 mRNA hsa-miR-520b TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-520c-3p TSEN54 miRanda miRanda
14034 chr17 73517527 73517527 1 + G A PAAD 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGAATGCCAGCGTGCAGC < 41bp 1 0.37117306884636 1 0.142129302024841 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517527 nonsynonymous SNV 0.751 2 hm6A_associated_SNPs_54865 0 0 1 11 73517526 73517547 mRNA hsa-miR-520d-3p TSEN54 miRanda miRanda
14034 chr17 62223484 62223484 1 + A G PAAD 62223477 + 62223457 62223497 41 CCAATTAAAGCACGTGTTAGACTGCTGACGCGGGTGATGCG CCAATTAAAGCACGTGTTAGACTGCTGGCGCGGGTGATGCG < 41bp 1 0.518828209849804 1 0.950207948684692 experiment 0.962343580300393 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223477 chr17:62223484 . . 0 hm6A_associated_SNPs_54936 0 0 1 1 62223483 62223505 mRNA hsa-miR-145 SNORD104 miRanda miRanda
14034 chr17 62223484 62223484 1 + A G PAAD 62223499 + 62223479 62223519 41 TGCTGACGCGGGTGATGCGAACTGGAGTCTGAGCCTGCCCG TGCTGGCGCGGGTGATGCGAACTGGAGTCTGAGCCTGCCCG < 41bp 1 0.57495464042146 1 0.953020453453064 experiment 0.850090719157079 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 6 SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223499 chr17:62223484 . . 0 hm6A_associated_SNPs_54937 0 0 1 1 62223483 62223505 mRNA hsa-miR-145 SNORD104 miRanda miRanda
14034 chr16 304439 304439 1 + C T PAAD 304429 + 304409 304449 41 CGTGATGTTGGACCACAAGGACTTAGAGGCCGAAATCCACC CGTGATGTTGGACCACAAGGACTTAGAGGCTGAAATCCACC < 41bp 1 0.348527416343565 1 0.993521094322205 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:304429 chr16:304439 synonymous SNV . 0 hm6A_associated_SNPs_54966 0 0 1 1 304424 304447 mRNA hsa-miR-876-5p ITFG3 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987312 69987333 mRNA hsa-miR-15a CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987312 69987333 mRNA hsa-miR-16 CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987309 69987330 mRNA hsa-miR-29a CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987308 69987330 mRNA hsa-miR-29b CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987312 69987333 mRNA hsa-miR-15b CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987313 69987333 mRNA hsa-miR-195 CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987309 69987330 mRNA hsa-miR-29c CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987313 69987333 mRNA hsa-miR-424 CCT2 miRanda miRanda
14034 chr12 69987317 69987317 1 + G A PAAD 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCTGAACAACTCTTTGGTGCTGCTGG < 41bp 1 0.788730185282394 1 0.166587918996811 experiment 0.422539629435213 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987317 synonymous SNV . 0 hm6A_associated_SNPs_54986 0 0 1 9 69987313 69987333 mRNA hsa-miR-497 CCT2 miRanda miRanda
14034 chr1 54670848 54670848 1 + G A PAAD 54670840 + 54670820 54670860 41 CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG CTCACGCCCGTCTCTGGCAGACCACTGAAGAAATCCCCAAG < 41bp 1 0.22236583552604 1 0.946158409118652 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670840 chr1:54670848 synonymous SNV . 0 hm6A_associated_SNPs_55026 0 0 1 2 54670843 54670863 mRNA hsa-miR-326 MRPL37 miRanda miRanda
14034 chr1 54670848 54670848 1 + G A PAAD 54670840 + 54670820 54670860 41 CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG CTCACGCCCGTCTCTGGCAGACCACTGAAGAAATCCCCAAG < 41bp 1 0.22236583552604 1 0.946158409118652 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670840 chr1:54670848 synonymous SNV . 0 hm6A_associated_SNPs_55026 0 0 1 2 54670834 54670856 mRNA hsa-miR-876-5p MRPL37 miRanda miRanda
14034 chr12 108082504 108082504 1 + G A PAAD 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGGTGACCCAAAGGATGACAGGACGCTTGATGATGATG < 41bp 1 0.739311787759526 1 0.947689056396484 experiment 0.521376424480947 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082504 nonsynonymous SNV 0.199 1 hm6A_associated_SNPs_55050 0 0 1 3 108082496 108082516 mRNA hsa-miR-205 PWP1 miRanda miRanda
14034 chr12 108082504 108082504 1 + G A PAAD 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGGTGACCCAAAGGATGACAGGACGCTTGATGATGATG < 41bp 1 0.739311787759526 1 0.947689056396484 experiment 0.521376424480947 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082504 nonsynonymous SNV 0.199 1 hm6A_associated_SNPs_55050 0 0 1 3 108082486 108082507 mRNA hsa-miR-330-5p PWP1 miRanda miRanda
14034 chr12 108082504 108082504 1 + G A PAAD 108082511 + 108082491 108082531 41 GGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATG GGATGGTGACCCAAAGGATGACAGGACGCTTGATGATGATG < 41bp 1 0.739311787759526 1 0.947689056396484 experiment 0.521376424480947 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082511 chr12:108082504 nonsynonymous SNV 0.199 1 hm6A_associated_SNPs_55050 0 0 1 3 108082486 108082507 mRNA hsa-miR-326 PWP1 miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153506 37153528 mRNA hsa-miR-26a RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153507 37153528 mRNA hsa-miR-26b RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153501 37153523 mRNA hsa-miR-27a RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153510 37153534 mRNA hsa-miR-204 RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153510 37153534 mRNA hsa-miR-211 RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153499 37153520 mRNA hsa-miR-214 RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153507 37153526 mRNA hsa-miR-224 RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153501 37153523 mRNA hsa-miR-27b RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153493 37153514 mRNA hsa-miR-495 RALGAPB miRanda miRanda
14034 chr20 37153514 37153514 1 + C A PAAD 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTATGCT < 41bp 1 0.251001619627564 1 0.0144220590591431 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153514 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55084 0 0 1 10 37153512 37153528 mRNA hsa-miR-1297 RALGAPB miRanda miRanda
14034 chr3 186503747 186503747 1 + C A PAAD 186503764 + 186503744 186503784 41 GTTCGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA GTTAGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA < 41bp 1 0.34439669449594 1 0.82716691493988 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 4 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503764 chr3:186503747 stopgain . 0 hm6A_associated_SNPs_55100 0 0 1 1 186503745 186503765 mRNA hsa-miR-129-5p EIF4A2 miRanda miRanda
14034 chr13 28001293 28001293 1 + G T PAAD 28001304 + 28001284 28001324 41 ATCTGAGCCGCCACATTCTGACTCACACAGGAGAAAAGCCG ATCTGAGCCTCCACATTCTGACTCACACAGGAGAAAAGCCG < 41bp 1 0.288857950241317 1 0.0389538109302521 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28001304 chr13:28001293 nonsynonymous SNV 0.834 5 hm6A_associated_SNPs_55134 0 0 1 2 28001272 28001293 mRNA hsa-miR-24 GTF3A miRanda miRanda
14034 chr13 28001293 28001293 1 + G T PAAD 28001304 + 28001284 28001324 41 ATCTGAGCCGCCACATTCTGACTCACACAGGAGAAAAGCCG ATCTGAGCCTCCACATTCTGACTCACACAGGAGAAAAGCCG < 41bp 1 0.288857950241317 1 0.0389538109302521 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 GTF3A ENSG00000122034 CDS Human protein_coding chr13:28001304 chr13:28001293 nonsynonymous SNV 0.834 5 hm6A_associated_SNPs_55134 0 0 1 2 28001286 28001308 mRNA hsa-miR-383 GTF3A miRanda miRanda
14034 chrX 70627893 70627893 1 + A G PAAD 70627905 + 70627885 70627925 41 CTCGGCCAATGGACCTACAAACACTCCGCGAAAACGTGCGT CTCGGCCAGTGGACCTACAAACACTCCGCGAAAACGTGCGT < 41bp 1 0.497265754351875 1 0.707290351390839 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 9 TAF1 ENSG00000147133 CDS Human protein_coding chrX:70627905 chrX:70627893 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_55161 0 0 1 1 70627891 70627912 mRNA hsa-miR-122 DYT3 miRanda miRanda
14034 chr1 52249970 52249970 1 + C T PAAD 52249964 + 52249944 52249984 41 TCATGTCTAGACTATGATGAACATTACATTCTCACATTCCC TCATGTCTAGACTATGATGAACATTATATTCTCACATTCCC < 41bp 1 0.368653172677461 1 0.0116919875144958 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52249964 chr1:52249970 synonymous SNV . 0 hm6A_associated_SNPs_55162 0 0 1 3 52249962 52249984 mRNA hsa-miR-1 OSBPL9 miRanda miRanda
14034 chr1 52249970 52249970 1 + C T PAAD 52249964 + 52249944 52249984 41 TCATGTCTAGACTATGATGAACATTACATTCTCACATTCCC TCATGTCTAGACTATGATGAACATTATATTCTCACATTCCC < 41bp 1 0.368653172677461 1 0.0116919875144958 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52249964 chr1:52249970 synonymous SNV . 0 hm6A_associated_SNPs_55162 0 0 1 3 52249962 52249984 mRNA hsa-miR-206 OSBPL9 miRanda miRanda
14034 chr1 52249970 52249970 1 + C T PAAD 52249964 + 52249944 52249984 41 TCATGTCTAGACTATGATGAACATTACATTCTCACATTCCC TCATGTCTAGACTATGATGAACATTATATTCTCACATTCCC < 41bp 1 0.368653172677461 1 0.0116919875144958 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52249964 chr1:52249970 synonymous SNV . 0 hm6A_associated_SNPs_55162 0 0 1 3 52249965 52249984 mRNA hsa-miR-613 OSBPL9 miRanda miRanda
14034 chr8 27634027 27634027 1 + C T PAAD 27634026 + 27634006 27634046 41 AAAACAACTGAAATAAATAGACTGCCATCAGCAAATCAAGG AAAACAACTGAAATAAATAGATTGCCATCAGCAAATCAAGG Direct Loss 1 0.77556637352051 1 0.872636318206787 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 22 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634026 chr8:27634027 synonymous SNV . 0 hm6A_associated_SNPs_55166 0 0 0 4 27634009 27634032 mRNA hsa-miR-34a ESCO2 miRanda miRanda
14034 chr8 27634027 27634027 1 + C T PAAD 27634026 + 27634006 27634046 41 AAAACAACTGAAATAAATAGACTGCCATCAGCAAATCAAGG AAAACAACTGAAATAAATAGATTGCCATCAGCAAATCAAGG Direct Loss 1 0.77556637352051 1 0.872636318206787 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 22 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634026 chr8:27634027 synonymous SNV . 0 hm6A_associated_SNPs_55166 0 0 0 4 27634010 27634032 mRNA hsa-miR-34c-5p ESCO2 miRanda miRanda
14034 chr8 27634027 27634027 1 + C T PAAD 27634026 + 27634006 27634046 41 AAAACAACTGAAATAAATAGACTGCCATCAGCAAATCAAGG AAAACAACTGAAATAAATAGATTGCCATCAGCAAATCAAGG Direct Loss 1 0.77556637352051 1 0.872636318206787 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 22 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634026 chr8:27634027 synonymous SNV . 0 hm6A_associated_SNPs_55166 0 0 0 4 27634008 27634032 mRNA hsa-miR-449a ESCO2 miRanda miRanda
14034 chr8 27634027 27634027 1 + C T PAAD 27634026 + 27634006 27634046 41 AAAACAACTGAAATAAATAGACTGCCATCAGCAAATCAAGG AAAACAACTGAAATAAATAGATTGCCATCAGCAAATCAAGG Direct Loss 1 0.77556637352051 1 0.872636318206787 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 22 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634026 chr8:27634027 synonymous SNV . 0 hm6A_associated_SNPs_55166 0 0 0 4 27634008 27634032 mRNA hsa-miR-449b ESCO2 miRanda miRanda
14034 chr1 28800433 28800433 1 + G C PRAD 28800441 + 28800421 28800461 41 AGTCCCCAAGAGGATACTGGACCAGAACTTTGGGGAGCCCC AGTCCCCAAGAGCATACTGGACCAGAACTTTGGGGAGCCCC < 41bp 1 0.791288655390499 1 0.9919114112854 experiment 0.417422689219003 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 13 PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28800441 chr1:28800433 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_55303 0 0 1 1 28800413 28800433 mRNA hsa-miR-326 PHACTR4 miRanda miRanda
14034 chr5 70856003 70856003 1 + G T PRAD 70855997 + 70855977 70856017 41 TGTCTGATAAGGAAGAAAGAACTGATGCTGCTCCTAAGTCT TGTCTGATAAGGAAGAAAGAACTGATTCTGCTCCTAAGTCT < 41bp 1 0.52714181277284 1 0.992870211601257 experiment 0.945716374454321 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70855997 chr5:70856003 nonsynonymous SNV 0.199 0 hm6A_associated_SNPs_55308 0 0 1 2 70856000 70856021 mRNA hsa-miR-378 BDP1 miRanda miRanda
14034 chr5 70856003 70856003 1 + G T PRAD 70855997 + 70855977 70856017 41 TGTCTGATAAGGAAGAAAGAACTGATGCTGCTCCTAAGTCT TGTCTGATAAGGAAGAAAGAACTGATTCTGCTCCTAAGTCT < 41bp 1 0.52714181277284 1 0.992870211601257 experiment 0.945716374454321 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70855997 chr5:70856003 nonsynonymous SNV 0.199 0 hm6A_associated_SNPs_55308 0 0 1 2 70855999 70856021 mRNA hsa-miR-422a BDP1 miRanda miRanda
14034 chr19 1271165 1271165 1 + C T PRAD 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGACAGGGAGACCTAGAGATCTC < 41bp 1 0.402309240646405 1 0.276851534843445 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 32 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271165 stopgain 0.998 0 hm6A_associated_SNPs_55322 0 0 1 2 1271147 1271170 mRNA hsa-miR-330-5p CIRBP miRanda miRanda
14034 chr19 1271165 1271165 1 + C T PRAD 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGACAGGGAGACCTAGAGATCTC < 41bp 1 0.402309240646405 1 0.276851534843445 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 32 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271165 stopgain 0.998 0 hm6A_associated_SNPs_55322 0 0 1 2 1271152 1271170 mRNA hsa-miR-326 CIRBP miRanda miRanda
14034 chr2 202025331 202025331 1 + G A PRAD 202025340 + 202025320 202025360 41 GTGTGTATGGTGTGGATCAGACTCACTCAGGGCTCCCCCTG GTGTGTATGGTATGGATCAGACTCACTCAGGGCTCCCCCTG < 41bp 1 0.53506045165294 1 0.899001955986023 experiment 0.929879096694119 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 CFLAR ENSG00000003402 CDS Human protein_coding chr2:202025340 chr2:202025331 nonsynonymous SNV 0.001 3 hm6A_associated_SNPs_55358 0 0 1 2 202025331 202025352 mRNA hsa-miR-125b CFLAR miRanda miRanda
14034 chr2 202025331 202025331 1 + G A PRAD 202025340 + 202025320 202025360 41 GTGTGTATGGTGTGGATCAGACTCACTCAGGGCTCCCCCTG GTGTGTATGGTATGGATCAGACTCACTCAGGGCTCCCCCTG < 41bp 1 0.53506045165294 1 0.899001955986023 experiment 0.929879096694119 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 12 CFLAR ENSG00000003402 CDS Human protein_coding chr2:202025340 chr2:202025331 nonsynonymous SNV 0.001 3 hm6A_associated_SNPs_55358 0 0 1 2 202025329 202025352 mRNA hsa-miR-125a-5p CFLAR miRanda miRanda
14034 chr16 89804415 89804415 1 - C T PRAD 89804400 - 89804380 89804420 41 TGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGG TGCCCACTGCCTGCACTGGAACCCACAGACCTCACACCTGG < 41bp 1 0.788925578944108 1 0.740453481674194 experiment 0.422148842111783 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804400 chr16:89804415 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_55363 0 0 1 3 89804402 89804423 mRNA hsa-miR-148a FANCA miRanda miRanda
14034 chr16 89804415 89804415 1 - C T PRAD 89804400 - 89804380 89804420 41 TGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGG TGCCCACTGCCTGCACTGGAACCCACAGACCTCACACCTGG < 41bp 1 0.788925578944108 1 0.740453481674194 experiment 0.422148842111783 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804400 chr16:89804415 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_55363 0 0 1 3 89804402 89804421 mRNA hsa-miR-152 FANCA miRanda miRanda
14034 chr16 89804415 89804415 1 - C T PRAD 89804400 - 89804380 89804420 41 TGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGG TGCCCACTGCCTGCACTGGAACCCACAGACCTCACACCTGG < 41bp 1 0.788925578944108 1 0.740453481674194 experiment 0.422148842111783 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804400 chr16:89804415 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_55363 0 0 1 3 89804402 89804423 mRNA hsa-miR-148b FANCA miRanda miRanda
14034 chr1 33292352 33292352 1 + A G PRAD 33292353 + 33292333 33292373 41 GCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTG GCTCTCTTCTTCAAACAATGACTTTCAACAGACTGTCTCTG < 41bp 1 0.796317490863392 1 0.996114313602448 experiment 0.407365018273217 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 20 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292353 chr1:33292352 nonsynonymous SNV 0.370 0 hm6A_associated_SNPs_55369 0 0 1 1 33292343 33292363 mRNA hsa-miR-653 S100PBP miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026639 mRNA hsa-miR-15a ADAM15 miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026639 mRNA hsa-miR-16 ADAM15 miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026638 mRNA hsa-miR-103 ADAM15 miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026638 mRNA hsa-miR-107 ADAM15 miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026639 mRNA hsa-miR-15b ADAM15 miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026639 mRNA hsa-miR-195 ADAM15 miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026639 mRNA hsa-miR-424 ADAM15 miRanda miRanda
14034 chr1 155026631 155026631 1 + C A PRAD 155026630 + 155026610 155026650 41 TGTTCCCATGCTGCAGGAGAACTGCTGCTACCAGGGAAGAG TGTTCCCATGCTGCAGGAGAAATGCTGCTACCAGGGAAGAG Direct Loss 1 0.250853125437474 1 0.0183712840080261 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 22 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155026630 chr1:155026631 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_55382 0 0 1 8 155026626 155026639 mRNA hsa-miR-497 ADAM15 miRanda miRanda
14034 chr10 11207596 11207596 1 + C T PRAD 11207616 + 11207596 11207636 41 CCAGATCAACGTCCTCCGGGACCGGAGTCAGAACCCTCCGC TCAGATCAACGTCCTCCGGGACCGGAGTCAGAACCCTCCGC < 41bp 1 0.0630497084314134 1 0.994204342365265 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 1 CELF2 ENSG00000048740 CDS Human protein_coding chr10:11207616 chr10:11207596 synonymous SNV . 0 hm6A_associated_SNPs_55404 0 0 0 1 11207575 11207598 mRNA hsa-miR-379 CELF2 miRanda miRanda
14034 chr7 45077977 45077977 1 + C T PRAD 45077992 + 45077972 45078012 41 GAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGA GAGCGTGTCGAGCCAGACAGACTGCTGAGCGACTATATTGA < 41bp 1 0.316695413852224 1 0.942251205444336 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45077992 chr7:45077977 synonymous SNV . 0 hm6A_associated_SNPs_55419 0 0 1 1 45077966 45077988 mRNA hsa-miR-149 CCM2 miRanda miRanda
14034 chr4 128627966 128627966 1 + C T PRAD 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACATGCA < 41bp 1 0.62574233897048 1 0.922594666481018 experiment 0.748515322059039 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627966 nonsynonymous SNV 0.007 0 hm6A_associated_SNPs_55434 0 0 1 2 128627962 128627984 mRNA hsa-miR-7 INTU miRanda miRanda
14034 chr4 128627966 128627966 1 + C T PRAD 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACATGCA < 41bp 1 0.62574233897048 1 0.922594666481018 experiment 0.748515322059039 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627966 nonsynonymous SNV 0.007 0 hm6A_associated_SNPs_55434 0 0 1 2 128627947 128627968 mRNA hsa-miR-187 INTU miRanda miRanda
14034 chr11 67201898 67201898 1 + G A PRAD 67201906 + 67201886 67201926 41 CACACGGCAGACGCCGGTGGACAGTCCTGATGACACAGCCC CACACGGCAGACACCGGTGGACAGTCCTGATGACACAGCCC < 41bp 1 0.615769109642345 1 0.960395932197571 experiment 0.768461780715311 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 13 RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201906 chr11:67201898 synonymous SNV . 0 hm6A_associated_SNPs_55441 0 0 1 1 67201876 67201898 mRNA hsa-miR-346 RPS6KB2 miRanda miRanda
14034 chr16 71674559 71674559 1 + G T PRAD 71674574 + 71674554 71674594 41 TCCAAGGAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGG TCCAATGAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGG < 41bp 1 0.531351777187291 1 0.986895799636841 experiment 0.937296445625419 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 6 MARVELD3 ENSG00000140832 CDS Human protein_coding chr16:71674574 chr16:71674559 stopgain 0.820 1 hm6A_associated_SNPs_55474 0 0 0 1 71674554 71674578 mRNA hsa-miR-375 MARVELD3 miRanda miRanda
14034 chr8 96047721 96047721 1 + C T PRAD 96047706 + 96047686 96047726 41 AAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATG AAGACTCAGTCTCTGAGAAAACAATTGGACTGATGTGAATG < 41bp 1 0.738236002946206 1 0.910872101783752 experiment 0.523527994107588 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96047706 chr8:96047721 stopgain 0.998 1 hm6A_associated_SNPs_55512 0 0 1 1 96047705 96047731 mRNA hsa-miR-217 C8orf38 miRanda miRanda
14034 chr16 58036476 58036476 1 + C T PRAD 58036482 + 58036462 58036502 41 CCTGAAGATGACAGCACAAAACACGGGGGACGGGTGCGCAC CCTGAAGATGACAGTACAAAACACGGGGGACGGGTGCGCAC < 41bp 1 0.694872329361144 1 0.352832823991776 experiment 0.610255341277711 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 15 USB1 ENSG00000103005 CDS Human protein_coding chr16:58036482 chr16:58036476 synonymous SNV . 0 hm6A_associated_SNPs_55586 0 0 1 1 58036459 58036480 mRNA hsa-miR-218 C16orf57 miRanda miRanda
14034 chr3 9712766 9712766 1 + G A PRAD 9712773 + 9712753 9712793 41 TGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACC TGATAAGGTCAGAAGCTATGACATCAAGCTGCTTCGATACC < 41bp 1 0.671820561061787 1 0.102201789617538 experiment 0.656358877876427 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9712773 chr3:9712766 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_55620 0 0 1 2 9712760 9712783 mRNA hsa-miR-590-5p MTMR14 miRanda miRanda
14034 chr3 9712766 9712766 1 + G A PRAD 9712773 + 9712753 9712793 41 TGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACC TGATAAGGTCAGAAGCTATGACATCAAGCTGCTTCGATACC < 41bp 1 0.671820561061787 1 0.102201789617538 experiment 0.656358877876427 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 14 MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9712773 chr3:9712766 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_55620 0 0 1 2 9712749 9712772 mRNA hsa-miR-875-5p MTMR14 miRanda miRanda
14034 chr15 44094002 44094002 1 + T G PRAD 44093996 + 44093976 44094016 41 TAGAGGCGCTTATTGCCCTAACCAACTGATGCGTGCTTTCT TAGAGGCGCTTATTGCCCTAACCAACGGATGCGTGCTTTCT < 41bp 1 0.610856608278995 1 0.693467855453491 experiment 0.77828678344201 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 HYPK ENSG00000140264;ENSG00000242028 CDS Human other chr15:44093996 chr15:44094002 stoploss 0.938 0 hm6A_associated_SNPs_55655 0 0 1 1 44093992 44094013 mRNA hsa-miR-497 C15orf63 miRanda miRanda
14034 chr3 39450137 39450137 1 + T G PRAD 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTGCTGCTG < 41bp 1 0.197619239310571 1 0.604623019695282 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450137 synonymous SNV . 0 hm6A_associated_SNPs_55673 0 0 1 7 39450129 39450150 mRNA hsa-miR-22 RPSA miRanda miRanda
14034 chr3 39450137 39450137 1 + T G PRAD 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTGCTGCTG < 41bp 1 0.197619239310571 1 0.604623019695282 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450137 synonymous SNV . 0 hm6A_associated_SNPs_55673 0 0 1 7 39450136 39450158 mRNA hsa-miR-25 RPSA miRanda miRanda
14034 chr3 39450137 39450137 1 + T G PRAD 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTGCTGCTG < 41bp 1 0.197619239310571 1 0.604623019695282 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450137 synonymous SNV . 0 hm6A_associated_SNPs_55673 0 0 1 7 39450135 39450158 mRNA hsa-miR-32 RPSA miRanda miRanda
14034 chr3 39450137 39450137 1 + T G PRAD 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTGCTGCTG < 41bp 1 0.197619239310571 1 0.604623019695282 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450137 synonymous SNV . 0 hm6A_associated_SNPs_55673 0 0 1 7 39450136 39450158 mRNA hsa-miR-92a RPSA miRanda miRanda
14034 chr3 39450137 39450137 1 + T G PRAD 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTGCTGCTG < 41bp 1 0.197619239310571 1 0.604623019695282 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450137 synonymous SNV . 0 hm6A_associated_SNPs_55673 0 0 1 7 39450136 39450158 mRNA hsa-miR-363 RPSA miRanda miRanda
14034 chr3 39450137 39450137 1 + T G PRAD 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTGCTGCTG < 41bp 1 0.197619239310571 1 0.604623019695282 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450137 synonymous SNV . 0 hm6A_associated_SNPs_55673 0 0 1 7 39450137 39450158 mRNA hsa-miR-367 RPSA miRanda miRanda
14034 chr3 39450137 39450137 1 + T G PRAD 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTGCTGCTG < 41bp 1 0.197619239310571 1 0.604623019695282 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450137 synonymous SNV . 0 hm6A_associated_SNPs_55673 0 0 1 7 39450136 39450158 mRNA hsa-miR-92b RPSA miRanda miRanda
14034 chr17 76212836 76212836 1 + G T PRAD 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGTACAGAGAAAGAGCCAA < 41bp 1 0.186395376342014 1 0.141850799322128 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212836 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_55756 0 0 1 2 76212819 76212838 mRNA hsa-miR-145 BIRC5 miRanda miRanda
14034 chr17 76212836 76212836 1 + G T PRAD 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGTACAGAGAAAGAGCCAA < 41bp 1 0.186395376342014 1 0.141850799322128 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212836 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_55756 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212836 76212836 1 + G T PRAD 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGTACAGAGAAAGAGCCAAGAACA Direct Loss 1 0.593218179649985 1 0.0430160462856293 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212836 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_55757 0 0 1 2 76212819 76212838 mRNA hsa-miR-145 BIRC5 miRanda miRanda
14034 chr17 76212836 76212836 1 + G T PRAD 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGTACAGAGAAAGAGCCAAGAACA Direct Loss 1 0.593218179649985 1 0.0430160462856293 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212836 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_55757 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr11 65271551 65271551 1 + A G PRAD 65271546 + 65271526 65271566 41 GGCAATGTTTTACACTATTGACCTTATATAGGGAAGGGAGG GGCAATGTTTTACACTATTGACCTTGTATAGGGAAGGGAGG < 41bp 1 0.0218171739887314 1 0.00790518522262573 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271546 chr11:65271551 . . 0 hm6A_associated_SNPs_55775 0 0 1 1 65271548 65271571 lncRNA hsa-miR-4640-3p MALAT1 miRanda starBase2
14034 chrX 73046745 73046745 1 - C T PRAD 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA TAAAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA < 41bp 1 0.668388455358731 1 0.915983319282532 experiment 0.663223089282538 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046745 . . 0 hm6A_associated_SNPs_55776 0 0 1 1 73046736 73046756 lncRNA hsa-miR-499a-5p XIST miRanda starBase2
14034 chrX 73046745 73046745 1 - C T PRAD 73046734 - 73046714 73046754 41 CTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGA CTTGAGTTAAAAGTCTTAAGACCTGGGACAGGACACATGGA < 41bp 1 0.285041531550231 1 0.911852598190308 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046734 chrX:73046745 . . 0 hm6A_associated_SNPs_55777 0 0 1 1 73046736 73046756 lncRNA hsa-miR-499a-5p XIST miRanda starBase2
14034 chrX 73046744 73046744 1 - T C PRAD 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA TAGGAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA < 41bp 1 0.695046426581774 1 0.907505631446838 experiment 0.609907146836452 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 4 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046744 . . 0 hm6A_associated_SNPs_55778 0 0 1 1 73046736 73046756 lncRNA hsa-miR-499a-5p XIST miRanda starBase2
14034 chrX 73046744 73046744 1 - T C PRAD 73046734 - 73046714 73046754 41 CTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGA CTTGAGTTAGGAGTCTTAAGACCTGGGACAGGACACATGGA < 41bp 1 0.294835386003165 1 0.863986968994141 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046734 chrX:73046744 . . 0 hm6A_associated_SNPs_55779 0 0 1 1 73046736 73046756 lncRNA hsa-miR-499a-5p XIST miRanda starBase2
14034 chr1 93300426 93300426 1 + A G PRAD 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTGGCCTGACAGATTATGCTGCAGCATAT < 41bp 1 0.518674046222651 1 0.246410578489304 experiment 0.962651907554697 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300426 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_55792 0 0 1 2 93300412 93300437 mRNA hsa-miR-103 RPL5 miRanda miRanda
14034 chr1 93300426 93300426 1 + A G PRAD 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTGGCCTGACAGATTATGCTGCAGCATAT < 41bp 1 0.518674046222651 1 0.246410578489304 experiment 0.962651907554697 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300426 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_55792 0 0 1 2 93300412 93300437 mRNA hsa-miR-107 RPL5 miRanda miRanda
14034 chr11 607296 607296 1 + C A PRAD 607300 + 607280 607320 41 TGGGGCGGTTCAGGCTCGGAACTTGTCAAATGGGAGTGTGC TGGGGCGGTTCAGGCTAGGAACTTGTCAAATGGGAGTGTGC < 41bp 1 0.789962151627731 1 0.959454774856567 experiment 0.420075696744539 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 17 PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607300 chr11:607296 synonymous SNV . 0 hm6A_associated_SNPs_55810 0 0 1 1 607278 607299 mRNA hsa-miR-615-3p PHRF1 miRanda miRanda
14034 chr11 34474685 34474685 1 + A G PRAD 34474676 + 34474656 34474696 41 GCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGAC GCCAAAAGAGAAATCCTCAGACACATCTGGAGGATCCGGAC < 41bp 1 0.661156613846699 1 0.0480230152606964 experiment 0.677686772306603 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 30 CAT ENSG00000121691 CDS Human protein_coding chr11:34474676 chr11:34474685 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_55904 0 0 1 1 34474673 34474694 mRNA hsa-miR-127-3p CAT miRanda miRanda
14034 chr12 53897517 53897517 1 + C G PRAD 53897532 + 53897512 53897552 41 AGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG AGACTGTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG < 41bp 1 0.761701167965615 1 0.843677878379822 experiment 0.476597664068771 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 6 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53897532 chr12:53897517 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55953 0 0 1 6 53897506 53897527 mRNA hsa-miR-34a TARBP2 miRanda miRanda
14034 chr12 53897517 53897517 1 + C G PRAD 53897532 + 53897512 53897552 41 AGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG AGACTGTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG < 41bp 1 0.761701167965615 1 0.843677878379822 experiment 0.476597664068771 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 6 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53897532 chr12:53897517 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55953 0 0 1 6 53897517 53897539 mRNA hsa-miR-1 TARBP2 miRanda miRanda
14034 chr12 53897517 53897517 1 + C G PRAD 53897532 + 53897512 53897552 41 AGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG AGACTGTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG < 41bp 1 0.761701167965615 1 0.843677878379822 experiment 0.476597664068771 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 6 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53897532 chr12:53897517 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55953 0 0 1 6 53897515 53897539 mRNA hsa-miR-206 TARBP2 miRanda miRanda
14034 chr12 53897517 53897517 1 + C G PRAD 53897532 + 53897512 53897552 41 AGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG AGACTGTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG < 41bp 1 0.761701167965615 1 0.843677878379822 experiment 0.476597664068771 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 6 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53897532 chr12:53897517 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55953 0 0 1 6 53897502 53897527 mRNA hsa-miR-34c-5p TARBP2 miRanda miRanda
14034 chr12 53897517 53897517 1 + C G PRAD 53897532 + 53897512 53897552 41 AGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG AGACTGTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG < 41bp 1 0.761701167965615 1 0.843677878379822 experiment 0.476597664068771 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 6 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53897532 chr12:53897517 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55953 0 0 1 6 53897505 53897527 mRNA hsa-miR-449a TARBP2 miRanda miRanda
14034 chr12 53897517 53897517 1 + C G PRAD 53897532 + 53897512 53897552 41 AGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG AGACTGTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTG < 41bp 1 0.761701167965615 1 0.843677878379822 experiment 0.476597664068771 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 6 TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53897532 chr12:53897517 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_55953 0 0 1 6 53897505 53897527 mRNA hsa-miR-449b TARBP2 miRanda miRanda
14034 chr1 145281379 145281379 1 + C G PRAD 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGGCAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0778194180366144 1 0.167200297117233 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281379 nonsynonymous SNV 0.983 2 hm6A_associated_SNPs_55972 0 0 0 2 145281369 145281383 mRNA hsa-miR-96 NOTCH2NL miRanda miRanda
14034 chr1 145281379 145281379 1 + C G PRAD 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGGCAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0778194180366144 1 0.167200297117233 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281379 nonsynonymous SNV 0.983 2 hm6A_associated_SNPs_55972 0 0 0 2 145281369 145281383 mRNA hsa-miR-1271 NOTCH2NL miRanda miRanda
14034 chr2 277057 277057 1 + A C READ 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAAACACAACTTATTATTGAAGATCC Direct Loss 1 0.763756509780493 1 0.737616300582886 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277057 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_55987 0 0 1 3 277050 277071 mRNA hsa-miR-374a ACP1 miRanda miRanda
14034 chr2 277057 277057 1 + A C READ 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAAACACAACTTATTATTGAAGATCC Direct Loss 1 0.763756509780493 1 0.737616300582886 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277057 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_55987 0 0 1 3 277045 277065 mRNA hsa-miR-382 ACP1 miRanda miRanda
14034 chr2 277057 277057 1 + A C READ 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATCCACAAACACAACTTATTATTGAAGATCC Direct Loss 1 0.763756509780493 1 0.737616300582886 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 20 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277057 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_55987 0 0 1 3 277050 277071 mRNA hsa-miR-374b ACP1 miRanda miRanda
14034 chr2 201680193 201680193 1 + G A READ 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCAATATGC < 41bp 1 0.746240453765032 1 0.889029860496521 experiment 0.507519092469936 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 35 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680193 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_56048 0 0 1 4 201680180 201680203 mRNA hsa-miR-217 BZW1 miRanda miRanda
14034 chr2 201680193 201680193 1 + G A READ 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCAATATGC < 41bp 1 0.746240453765032 1 0.889029860496521 experiment 0.507519092469936 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 35 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680193 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_56048 0 0 1 4 201680180 201680201 mRNA hsa-miR-153 BZW1 miRanda miRanda
14034 chr2 201680193 201680193 1 + G A READ 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCAATATGC < 41bp 1 0.746240453765032 1 0.889029860496521 experiment 0.507519092469936 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 35 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680193 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_56048 0 0 1 4 201680179 201680201 mRNA hsa-miR-448 BZW1 miRanda miRanda
14034 chr2 201680193 201680193 1 + G A READ 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCAATATGC < 41bp 1 0.746240453765032 1 0.889029860496521 experiment 0.507519092469936 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 35 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680193 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_56048 0 0 1 4 201680182 201680204 mRNA hsa-miR-544 BZW1 miRanda miRanda
14034 chr15 40684200 40684200 1 + C T READ 40684195 + 40684175 40684215 41 AGCTGAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAG AGCTGAAGCTTTTTAACGAAACAGCTAAAAAGCAGATGGAG < 41bp 1 0.510593205651198 1 0.0152989327907562 experiment 0.978813588697603 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 26 KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40684195 chr15:40684200 synonymous SNV . 0 hm6A_associated_SNPs_56055 0 0 1 1 40684191 40684206 mRNA hsa-miR-129-5p C15orf23 miRanda miRanda
14034 chr13 115008808 115008808 1 + G A READ 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCGTTTTCTATTTGAAAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.795105807377792 1 0.316366076469421 experiment 0.409788385244415 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 19 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008808 synonymous SNV . 0 hm6A_associated_SNPs_56071 0 0 1 2 115008790 115008809 mRNA hsa-miR-371-5p CDC16 miRanda miRanda
14034 chr13 115008808 115008808 1 + G A READ 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCGTTTTCTATTTGAAAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.795105807377792 1 0.316366076469421 experiment 0.409788385244415 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 19 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008808 synonymous SNV . 0 hm6A_associated_SNPs_56071 0 0 1 2 115008793 115008814 mRNA hsa-miR-375 CDC16 miRanda miRanda
14034 chr12 102117516 102117516 1 + A G READ 102117512 + 102117492 102117532 41 TTTTATAGGTAGCTCACATGACCAAAAGTGAACTATATCTT TTTTATAGGTAGCTCACATGACCAGAAGTGAACTATATCTT < 41bp 1 0.111403505050702 1 0.015142410993576 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102117512 chr12:102117516 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_56083 0 0 1 1 102117510 102117531 mRNA hsa-miR-190b CHPT1 miRanda miRanda
14034 chr12 102117516 102117516 1 + A G READ 102117523 + 102117503 102117543 41 GCTCACATGACCAAAAGTGAACTATATCTTCAAGACACTGT GCTCACATGACCAGAAGTGAACTATATCTTCAAGACACTGT < 41bp 1 0.341720688744323 1 0.0661753118038177 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102117523 chr12:102117516 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_56084 0 0 1 1 102117510 102117531 mRNA hsa-miR-190b CHPT1 miRanda miRanda
14034 chr5 169139135 169139135 1 + G A READ 169139145 + 169139125 169139165 41 TAAAGATAAAGGAGAAAAGAACTTTGCCATGTCCTATGTGA TAAAGATAAAAGAGAAAAGAACTTTGCCATGTCCTATGTGA < 41bp 1 0.135286244605742 1 0.985117137432098 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169139145 chr5:169139135 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_56102 0 0 0 1 169139124 169139140 mRNA hsa-miR-204 DOCK2 miRanda miRanda
14034 chr8 27634264 27634264 1 + A G READ 27634258 + 27634238 27634278 41 AAAAACCACAGAAGAGTTTAACTGCTAAGTATCAACCAAAG AAAAACCACAGAAGAGTTTAACTGCTGAGTATCAACCAAAG < 41bp 1 0.465927629565221 1 0.982893705368042 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634258 chr8:27634264 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_56128 0 0 1 1 27634254 27634279 mRNA hsa-miR-9 ESCO2 miRanda miRanda
14034 chr9 135558953 135558953 1 + C A READ 135558961 + 135558941 135558981 41 TCTTACTAGGTGCTGATTGGACATATCTCAAAGAAGATGAA TCTTACTAGGTGATGATTGGACATATCTCAAAGAAGATGAA < 41bp 1 0.755077972983901 1 0.981483459472656 experiment 0.489844054032197 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135558961 chr9:135558953 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_56168 0 0 1 3 135558950 135558968 mRNA hsa-miR-219-5p GTF3C4 miRanda miRanda
14034 chr9 135558953 135558953 1 + C A READ 135558961 + 135558941 135558981 41 TCTTACTAGGTGCTGATTGGACATATCTCAAAGAAGATGAA TCTTACTAGGTGATGATTGGACATATCTCAAAGAAGATGAA < 41bp 1 0.755077972983901 1 0.981483459472656 experiment 0.489844054032197 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135558961 chr9:135558953 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_56168 0 0 1 3 135558950 135558968 mRNA hsa-miR-190 GTF3C4 miRanda miRanda
14034 chr9 135558953 135558953 1 + C A READ 135558961 + 135558941 135558981 41 TCTTACTAGGTGCTGATTGGACATATCTCAAAGAAGATGAA TCTTACTAGGTGATGATTGGACATATCTCAAAGAAGATGAA < 41bp 1 0.755077972983901 1 0.981483459472656 experiment 0.489844054032197 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135558961 chr9:135558953 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_56168 0 0 1 3 135558950 135558968 mRNA hsa-miR-190b GTF3C4 miRanda miRanda
14034 chr12 57910251 57910251 1 + G T READ 57910235 + 57910215 57910255 41 TAGGGAAACATTGTCCGAGAACTGAAAGCACAAAAGGCAGA TAGGGAAACATTGTCCGAGAACTGAAAGCACAAAAGTCAGA < 41bp 1 0.588990870756177 1 0.948781490325928 experiment 0.822018258487645 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 MARS ENSG00000166986 CDS Human protein_coding chr12:57910235 chr12:57910251 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_56222 0 0 1 1 57910235 57910257 mRNA hsa-miR-346 MARS miRanda miRanda
14034 chr5 74893841 74893841 1 + T G READ 74893844 + 74893824 74893864 41 TTGATATATTTTTTAAGTAAACATTGAACATTTTATCATTA TTGATATATTTTTTAAGGAAACATTGAACATTTTATCATTA < 41bp 1 0.714205125872424 1 0.560461521148682 experiment 0.571589748255151 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 POLK ENSG00000122008 CDS Human protein_coding chr5:74893844 chr5:74893841 stoploss 0.999 0 hm6A_associated_SNPs_56302 0 0 1 1 74893828 74893849 mRNA hsa-miR-590-3p POLK miRanda miRanda
14034 chr5 74893841 74893841 1 + T G READ 74893851 + 74893831 74893871 41 ATTTTTTAAGTAAACATTGAACATTTTATCATTAATTTTTA ATTTTTTAAGGAAACATTGAACATTTTATCATTAATTTTTA < 41bp 1 0.71961731022739 1 0.5288405418396 experiment 0.560765379545221 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 POLK ENSG00000122008 CDS Human protein_coding chr5:74893851 chr5:74893841 stoploss 0.999 0 hm6A_associated_SNPs_56303 0 0 1 1 74893828 74893849 mRNA hsa-miR-590-3p POLK miRanda miRanda
14034 chr17 58740678 58740678 1 + G T READ 58740680 + 58740660 58740700 41 AAGCCCAAGAAATTGAAAGAACCCCTCCAACAAACTTTAAA AAGCCCAAGAAATTGAAATAACCCCTCCAACAAACTTTAAA < 41bp 1 0.734668422924805 1 0.997962355613708 experiment 0.530663154150389 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58740680 chr17:58740678 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_56309 0 0 1 1 58740676 58740697 mRNA hsa-miR-382 PPM1D miRanda miRanda
14034 chr3 19992406 19992406 1 + G A READ 19992389 + 19992369 19992409 41 GGGACTTATTTCAAATTTGGACATGGCTAGTCGAGGCGCAA GGGACTTATTTCAAATTTGGACATGGCTAGTCGAGGCACAA < 41bp 1 0.757295401652187 1 0.916143298149109 experiment 0.485409196695626 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 RAB5A ENSG00000144566 CDS Human protein_coding chr3:19992389 chr3:19992406 nonsynonymous SNV 0.901 1 hm6A_associated_SNPs_56326 0 0 1 1 19992390 19992413 mRNA hsa-miR-375 RAB5A miRanda miRanda
14034 chr12 107236592 107236592 1 + C A READ 107236591 + 107236571 107236611 41 TTTTATGGAGAAGAGAATAGACAAGGTAAGGCTGATAAAAT TTTTATGGAGAAGAGAATAGAAAAGGTAAGGCTGATAAAAT Direct Loss 1 0.500201783478658 1 0.726892709732056 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 22 RIC8B ENSG00000111785 CDS Human protein_coding chr12:107236591 chr12:107236592 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_56341 0 0 1 1 107236576 107236595 mRNA hsa-miR-211 RIC8B miRanda miRanda
14034 chr11 58384980 58384980 1 + G C READ 58384968 + 58384948 58384988 41 TCTTCCTGAGCCCTTGGGAAACTCAACCTCTGGAGAGTGCC TCTTCCTGAGCCCTTGGGAAACTCAACCTCTGCAGAGTGCC < 41bp 1 0.718667764399792 1 0.921548962593079 experiment 0.562664471200417 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58384968 chr11:58384980 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_56445 0 0 1 1 58384977 58384998 mRNA hsa-miR-139-5p ZFP91-CNTF miRanda miRanda
14034 chr5 76332520 76332520 1 + A G SARC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGGACTGTATTTTGACCGCAGCAC < 41bp 1 0.353745915505144 1 0.980765700340271 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332520 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_56472 0 0 1 7 76332503 76332530 mRNA hsa-miR-199a-5p AGGF1 miRanda miRanda
14034 chr5 76332520 76332520 1 + A G SARC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGGACTGTATTTTGACCGCAGCAC < 41bp 1 0.353745915505144 1 0.980765700340271 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332520 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_56472 0 0 1 7 76332508 76332529 mRNA hsa-miR-148a AGGF1 miRanda miRanda
14034 chr5 76332520 76332520 1 + A G SARC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGGACTGTATTTTGACCGCAGCAC < 41bp 1 0.353745915505144 1 0.980765700340271 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332520 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_56472 0 0 1 7 76332507 76332530 mRNA hsa-miR-199b-5p AGGF1 miRanda miRanda
14034 chr5 76332520 76332520 1 + A G SARC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGGACTGTATTTTGACCGCAGCAC < 41bp 1 0.353745915505144 1 0.980765700340271 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332520 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_56472 0 0 1 7 76332509 76332529 mRNA hsa-miR-152 AGGF1 miRanda miRanda
14034 chr5 76332520 76332520 1 + A G SARC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGGACTGTATTTTGACCGCAGCAC < 41bp 1 0.353745915505144 1 0.980765700340271 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332520 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_56472 0 0 1 7 76332520 76332541 mRNA hsa-miR-374a AGGF1 miRanda miRanda
14034 chr5 76332520 76332520 1 + A G SARC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGGACTGTATTTTGACCGCAGCAC < 41bp 1 0.353745915505144 1 0.980765700340271 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332520 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_56472 0 0 1 7 76332508 76332529 mRNA hsa-miR-148b AGGF1 miRanda miRanda
14034 chr5 76332520 76332520 1 + A G SARC 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGGACTGTATTTTGACCGCAGCAC < 41bp 1 0.353745915505144 1 0.980765700340271 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 35 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332520 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_56472 0 0 1 7 76332517 76332541 mRNA hsa-miR-374b AGGF1 miRanda miRanda
14034 chr12 111064246 111064246 1 + G C SARC 111064248 + 111064228 111064268 41 CCACCTCAAAGAGTATTTGAACTTGTTGACCAGATTAATCC CCACCTCAAAGAGTATTTCAACTTGTTGACCAGATTAATCC Direct Loss 1 0.284591485491589 1 0.0554026663303375 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111064248 chr12:111064246 nonsynonymous SNV 0.926 0 hm6A_associated_SNPs_56475 0 0 1 1 111064236 111064258 mRNA hsa-miR-505 TCTN1 miRanda miRanda
14034 chr12 111064246 111064246 1 + G C SARC 111064256 + 111064236 111064276 41 AAGAGTATTTGAACTTGTTGACCAGATTAATCCATCTATTT AAGAGTATTTCAACTTGTTGACCAGATTAATCCATCTATTT < 41bp 1 0.166022723989803 1 0.0352743566036224 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111064256 chr12:111064246 nonsynonymous SNV 0.926 0 hm6A_associated_SNPs_56476 0 0 1 1 111064236 111064258 mRNA hsa-miR-505 TCTN1 miRanda miRanda
14034 chr10 96352024 96352024 1 + G T SARC 96352004 + 96351984 96352024 41 AGATCGATGAAGAATTGGTAACAAATTCTGGGAAGTTCTTG AGATCGATGAAGAATTGGTAACAAATTCTGGGAAGTTCTTT < 41bp 1 0.56767263271462 1 0.231352269649506 experiment 0.86465473457076 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 HELLS ENSG00000119969 CDS Human protein_coding chr10:96352004 chr10:96352024 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_56511 0 0 1 2 96352020 96352044 mRNA hsa-miR-103 HELLS miRanda miRanda
14034 chr10 96352024 96352024 1 + G T SARC 96352004 + 96351984 96352024 41 AGATCGATGAAGAATTGGTAACAAATTCTGGGAAGTTCTTG AGATCGATGAAGAATTGGTAACAAATTCTGGGAAGTTCTTT < 41bp 1 0.56767263271462 1 0.231352269649506 experiment 0.86465473457076 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 HELLS ENSG00000119969 CDS Human protein_coding chr10:96352004 chr10:96352024 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_56511 0 0 1 2 96352020 96352044 mRNA hsa-miR-107 HELLS miRanda miRanda
14034 chr5 175772392 175772392 1 + G T SARC 175772399 + 175772379 175772419 41 CCTGCTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGC CCTGCTCTTCTATTCTGCGGACTTGAACCCTGATGCAGAGC < 41bp 1 0.731364573259964 1 0.997504711151123 experiment 0.537270853480072 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175772399 chr5:175772392 nonsynonymous SNV 0.085 2 hm6A_associated_SNPs_56609 0 0 1 2 175772371 175772397 mRNA hsa-miR-103 C5orf25 miRanda miRanda
14034 chr5 175772392 175772392 1 + G T SARC 175772399 + 175772379 175772419 41 CCTGCTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGC CCTGCTCTTCTATTCTGCGGACTTGAACCCTGATGCAGAGC < 41bp 1 0.731364573259964 1 0.997504711151123 experiment 0.537270853480072 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175772399 chr5:175772392 nonsynonymous SNV 0.085 2 hm6A_associated_SNPs_56609 0 0 1 2 175772371 175772397 mRNA hsa-miR-107 C5orf25 miRanda miRanda
14034 chr8 11679317 11679317 1 + G T SARC 11679298 + 11679278 11679318 41 ATCTGGCTGAGAAATACCAAACAGTGATTGCCGACATTTGC ATCTGGCTGAGAAATACCAAACAGTGATTGCCGACATTTTC < 41bp 1 0.657981784084942 1 0.000458449125289917 experiment 0.684036431830116 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 40 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11679298 chr8:11679317 nonsynonymous SNV 0.844 4 hm6A_associated_SNPs_56619 0 0 1 1 11679313 11679334 mRNA hsa-miR-365 FDFT1 miRanda miRanda
14034 chr10 69881724 69881724 1 + G T SARC 69881717 + 69881697 69881737 41 CACAGCTCCAAAAGGATTAGACCTCGTGCCTGCAAAAACCA CACAGCTCCAAAAGGATTAGACCTCGTTCCTGCAAAAACCA < 41bp 1 0.750009627804542 1 0.981128692626953 experiment 0.499980744390917 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881717 chr10:69881724 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_56633 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr10 69881724 69881724 1 + G T SARC 69881734 + 69881714 69881754 41 TAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT TAGACCTCGTTCCTGCAAAAACCACAAGAGTAAACTGGAAT < 41bp 1 0.674168007692044 1 0.993305087089539 experiment 0.651663984615912 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881734 chr10:69881724 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_56634 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr13 49762680 49762680 1 + G T SARC 49762691 + 49762671 49762711 41 TACAGTGGTGCTACCAGGGAACATCTTTGTGATCGACTGAA TACAGTGGTTCTACCAGGGAACATCTTTGTGATCGACTGAA < 41bp 1 0.648003271825692 1 0.359100520610809 experiment 0.703993456348616 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26593424;GSE73405;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49762691 chr13:49762680 nonsynonymous SNV 0.984 0 hm6A_associated_SNPs_56646 0 0 1 3 49762661 49762683 mRNA hsa-miR-29b FNDC3A miRanda miRanda
14034 chr13 49762680 49762680 1 + G T SARC 49762691 + 49762671 49762711 41 TACAGTGGTGCTACCAGGGAACATCTTTGTGATCGACTGAA TACAGTGGTTCTACCAGGGAACATCTTTGTGATCGACTGAA < 41bp 1 0.648003271825692 1 0.359100520610809 experiment 0.703993456348616 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26593424;GSE73405;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49762691 chr13:49762680 nonsynonymous SNV 0.984 0 hm6A_associated_SNPs_56646 0 0 1 3 49762653 49762680 mRNA hsa-miR-10a FNDC3A miRanda miRanda
14034 chr13 49762680 49762680 1 + G T SARC 49762691 + 49762671 49762711 41 TACAGTGGTGCTACCAGGGAACATCTTTGTGATCGACTGAA TACAGTGGTTCTACCAGGGAACATCTTTGTGATCGACTGAA < 41bp 1 0.648003271825692 1 0.359100520610809 experiment 0.703993456348616 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|26593424;GSE73405;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49762691 chr13:49762680 nonsynonymous SNV 0.984 0 hm6A_associated_SNPs_56646 0 0 1 3 49762662 49762683 mRNA hsa-miR-29c FNDC3A miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-302a TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-302b TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-302c TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-302d TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-372 TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-373 TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517527 73517547 mRNA hsa-miR-520e TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-520a-3p TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517527 73517547 mRNA hsa-miR-520b TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-520c-3p TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517526 73517547 mRNA hsa-miR-520d-3p TSEN54 miRanda miRanda
14034 chr17 73517534 73517534 1 + G T SARC 73517522 + 73517502 73517542 41 CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGC CCCGTATGAGAGGCAGCTTAACCTGGATGCCATCGTGCAGC < 41bp 1 0.353819184271434 1 0.31563013792038 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517522 chr17:73517534 nonsynonymous SNV 0.044 0 hm6A_associated_SNPs_56664 0 0 1 12 73517532 73517547 mRNA hsa-miR-302e TSEN54 miRanda miRanda
14034 chr19 44680582 44680582 1 + G T SARC 44680564 + 44680544 44680584 41 CATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAAGCC CATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAATCC < 41bp 1 0.501842585689446 1 0.997166395187378 experiment 0.996314828621108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680564 chr19:44680582 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_56671 0 0 1 3 44680577 44680597 mRNA hsa-miR-23a ZNF226 miRanda miRanda
14034 chr19 44680582 44680582 1 + G T SARC 44680564 + 44680544 44680584 41 CATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAAGCC CATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAATCC < 41bp 1 0.501842585689446 1 0.997166395187378 experiment 0.996314828621108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680564 chr19:44680582 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_56671 0 0 1 3 44680582 44680604 mRNA hsa-miR-217 ZNF226 miRanda miRanda
14034 chr19 44680582 44680582 1 + G T SARC 44680564 + 44680544 44680584 41 CATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAAGCC CATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAATCC < 41bp 1 0.501842585689446 1 0.997166395187378 experiment 0.996314828621108 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 39 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680564 chr19:44680582 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_56671 0 0 1 3 44680577 44680597 mRNA hsa-miR-23b ZNF226 miRanda miRanda
14034 chr12 110784105 110784105 1 + G T SARC 110784122 + 110784102 110784142 41 GTGGCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCA GTGTCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCA < 41bp 1 0.43630247062593 1 0.925405144691467 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110784122 chr12:110784105 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_56708 0 0 1 2 110784098 110784119 mRNA hsa-miR-196a ATP2A2 miRanda miRanda
14034 chr12 110784105 110784105 1 + G T SARC 110784122 + 110784102 110784142 41 GTGGCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCA GTGTCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCA < 41bp 1 0.43630247062593 1 0.925405144691467 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110784122 chr12:110784105 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_56708 0 0 1 2 110784098 110784119 mRNA hsa-miR-196b ATP2A2 miRanda miRanda
14034 chr17 15929935 15929935 1 + G T SARC 15929952 + 15929932 15929972 41 AGGGCATCAGATCTGGCAAGACAGATAAATCATCCTGAGCT AGGTCATCAGATCTGGCAAGACAGATAAATCATCCTGAGCT < 41bp 1 0.620429466530808 1 0.0492028892040253 experiment 0.759141066938385 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 TTC19 ENSG00000011295 CDS Human protein_coding chr17:15929952 chr17:15929935 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_56717 0 0 1 1 15929934 15929954 mRNA hsa-miR-431 TTC19 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073382 12073404 mRNA hsa-miR-17 MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073382 12073404 mRNA hsa-miR-106a MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073377 12073403 mRNA hsa-miR-302a MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073377 12073403 mRNA hsa-miR-302b MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073377 12073403 mRNA hsa-miR-302c MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073377 12073403 mRNA hsa-miR-302d MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073377 12073403 mRNA hsa-miR-372 MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073381 12073403 mRNA hsa-miR-373 MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073382 12073403 mRNA hsa-miR-520a-3p MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073382 12073403 mRNA hsa-miR-520c-3p MFN2 miRanda miRanda
14034 chr1 12073382 12073382 1 + G T SARC 12073369 + 12073349 12073389 41 TTTATACCACTGAGGGAGAGACCCTTTCTGAAAGAAGTATG TTTATACCACTGAGGGAGAGACCCTTTCTGAAATAAGTATG < 41bp 1 0.403160912328496 1 0.591026604175568 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12073369 chr1:12073382 . . 0 hm6A_associated_SNPs_56743 0 0 1 11 12073382 12073403 mRNA hsa-miR-520d-3p MFN2 miRanda miRanda
14034 chr3 122821305 122821305 1 + G T SARC 122821314 + 122821294 122821334 41 AGTTGACCTGAGCCCGAAGGACAAAAAGGTTGAATTATTCC AGTTGACCTGATCCCGAAGGACAAAAAGGTTGAATTATTCC < 41bp 1 0.697268229749202 1 0.748153448104858 experiment 0.605463540501596 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122821314 chr3:122821305 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_56788 0 0 1 1 122821287 122821308 mRNA hsa-miR-24 PDIA5 miRanda miRanda
14034 chr3 158399853 158399853 1 + G T SARC 158399861 + 158399841 158399881 41 AGGTGTCCTGGAGCCTCTGGACCCAGAGGACTACACTAAAT AGGTGTCCTGGATCCTCTGGACCCAGAGGACTACACTAAAT < 41bp 1 0.396389851090027 1 0.944718778133392 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 13 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158399861 chr3:158399853 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_56792 0 0 1 2 158399846 158399869 mRNA hsa-miR-330-5p GFM1 miRanda miRanda
14034 chr3 158399853 158399853 1 + G T SARC 158399861 + 158399841 158399881 41 AGGTGTCCTGGAGCCTCTGGACCCAGAGGACTACACTAAAT AGGTGTCCTGGATCCTCTGGACCCAGAGGACTACACTAAAT < 41bp 1 0.396389851090027 1 0.944718778133392 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 13 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158399861 chr3:158399853 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_56792 0 0 1 2 158399850 158399869 mRNA hsa-miR-326 GFM1 miRanda miRanda
14034 chr5 134147455 134147455 1 + G T SARC 134147446 + 134147426 134147466 41 AGGGATTCAAGTTTGATGAAACAGAACAAGCTTTGGCTAAT AGGGATTCAAGTTTGATGAAACAGAACAATCTTTGGCTAAT < 41bp 1 0.494069554719122 1 0.784886062145233 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 30 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134147446 chr5:134147455 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_56810 0 0 1 1 134147438 134147459 mRNA hsa-miR-382 DDX46 miRanda miRanda
14034 chr6 4044102 4044102 1 + G T SARC 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT TCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT < 41bp 1 0.708468985923906 1 0.853137612342834 experiment 0.583062028152187 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044102 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_56814 0 0 1 2 4044088 4044112 mRNA hsa-miR-330-5p PRPF4B miRanda miRanda
14034 chr6 4044102 4044102 1 + G T SARC 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT TCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT < 41bp 1 0.708468985923906 1 0.853137612342834 experiment 0.583062028152187 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044102 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_56814 0 0 1 2 4044093 4044112 mRNA hsa-miR-326 PRPF4B miRanda miRanda
14034 chr6 31805055 31805055 1 + G T SARC 31805039 + 31805019 31805059 41 CTCTGGAAGCCCAGCCAGGGACAATGCACCTTCACAGAGAT CTCTGGAAGCCCAGCCAGGGACAATGCACCTTCACATAGAT < 41bp 1 0.43457301222861 1 0.7536700963974 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 37 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31805039 chr6:31805055 . . 0 hm6A_associated_SNPs_56819 0 0 1 3 31805044 31805067 mRNA hsa-miR-19a C6orf48 miRanda miRanda
14034 chr6 31805055 31805055 1 + G T SARC 31805039 + 31805019 31805059 41 CTCTGGAAGCCCAGCCAGGGACAATGCACCTTCACAGAGAT CTCTGGAAGCCCAGCCAGGGACAATGCACCTTCACATAGAT < 41bp 1 0.43457301222861 1 0.7536700963974 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 37 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31805039 chr6:31805055 . . 0 hm6A_associated_SNPs_56819 0 0 1 3 31805044 31805067 mRNA hsa-miR-19b C6orf48 miRanda miRanda
14034 chr6 31805055 31805055 1 + G T SARC 31805039 + 31805019 31805059 41 CTCTGGAAGCCCAGCCAGGGACAATGCACCTTCACAGAGAT CTCTGGAAGCCCAGCCAGGGACAATGCACCTTCACATAGAT < 41bp 1 0.43457301222861 1 0.7536700963974 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 37 C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31805039 chr6:31805055 . . 0 hm6A_associated_SNPs_56819 0 0 1 3 31805037 31805061 mRNA hsa-miR-216b C6orf48 miRanda miRanda
14034 chr10 99211630 99211630 1 + G T SARC 99211650 + 99211630 99211670 41 GCCTGTCTACTGGCTGGTAGACAACGTGATCCGCTGGTTTG TCCTGTCTACTGGCTGGTAGACAACGTGATCCGCTGGTTTG < 41bp 1 0.768698757248405 1 0.630480587482452 experiment 0.462602485503189 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 1 ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211650 chr10:99211630 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_56865 0 0 1 1 99211621 99211641 mRNA hsa-miR-411 ZDHHC16 miRanda miRanda
14034 chr11 17351734 17351734 1 + G T SARC 17351751 + 17351731 17351771 41 ATTGCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA ATTTCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA < 41bp 1 0.756867098365809 1 0.986359596252441 experiment 0.486265803268381 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17351751 chr11:17351734 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_56870 0 0 1 3 17351713 17351734 mRNA hsa-miR-374a NUCB2 miRanda miRanda
14034 chr11 17351734 17351734 1 + G T SARC 17351751 + 17351731 17351771 41 ATTGCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA ATTTCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA < 41bp 1 0.756867098365809 1 0.986359596252441 experiment 0.486265803268381 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17351751 chr11:17351734 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_56870 0 0 1 3 17351721 17351742 mRNA hsa-miR-340 NUCB2 miRanda miRanda
14034 chr11 17351734 17351734 1 + G T SARC 17351751 + 17351731 17351771 41 ATTGCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA ATTTCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA < 41bp 1 0.756867098365809 1 0.986359596252441 experiment 0.486265803268381 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17351751 chr11:17351734 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_56870 0 0 1 3 17351713 17351734 mRNA hsa-miR-374b NUCB2 miRanda miRanda
14034 chr11 86056651 86056651 1 + G T SARC 86056658 + 86056638 86056678 41 TCAAAGACGACTAGCACAGAACCCTCTCTTTTGGAAAACAT TCAAAGACGACTATCACAGAACCCTCTCTTTTGGAAAACAT < 41bp 1 0.231838316406554 1 0.52275550365448 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86056658 chr11:86056651 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_56887 0 0 1 2 86056636 86056656 mRNA hsa-miR-218 C11orf73 miRanda miRanda
14034 chr11 86056651 86056651 1 + G T SARC 86056658 + 86056638 86056678 41 TCAAAGACGACTAGCACAGAACCCTCTCTTTTGGAAAACAT TCAAAGACGACTATCACAGAACCCTCTCTTTTGGAAAACAT < 41bp 1 0.231838316406554 1 0.52275550365448 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86056658 chr11:86056651 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_56887 0 0 1 2 86056640 86056663 mRNA hsa-miR-296-3p C11orf73 miRanda miRanda
14034 chr14 73678545 73678545 1 + G T SARC 73678555 + 73678535 73678575 41 GGAATGGGAAGCCCAGAGGGACAGTCATCTAGGGCCTCATC GGAATGGGAATCCCAGAGGGACAGTCATCTAGGGCCTCATC < 41bp 1 0.674023094865764 1 0.128968924283981 experiment 0.651953810268473 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73678555 chr14:73678545 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_56914 0 0 1 2 73678529 73678553 mRNA hsa-miR-330-5p PSEN1 miRanda miRanda
14034 chr14 73678545 73678545 1 + G T SARC 73678555 + 73678535 73678575 41 GGAATGGGAAGCCCAGAGGGACAGTCATCTAGGGCCTCATC GGAATGGGAATCCCAGAGGGACAGTCATCTAGGGCCTCATC < 41bp 1 0.674023094865764 1 0.128968924283981 experiment 0.651953810268473 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 11 PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73678555 chr14:73678545 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_56914 0 0 1 2 73678530 73678553 mRNA hsa-miR-326 PSEN1 miRanda miRanda
14034 chr17 30510198 30510198 1 + G T SARC 30510212 + 30510192 30510232 41 TTCAGCGAAAAACCTGAAGAACATATCAGAGCTCTTTTATT TTCAGCTAAAAACCTGAAGAACATATCAGAGCTCTTTTATT < 41bp 1 0.647068630874913 1 0.804291248321533 experiment 0.705862738250174 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30510212 chr17:30510198 synonymous SNV . 0 hm6A_associated_SNPs_56933 0 0 1 1 30510198 30510219 mRNA hsa-miR-190 RHOT1 miRanda miRanda
14034 chr17 76212848 76212848 1 + G T SARC 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGATCCAA < 41bp 1 0.168089151213155 1 0.274055361747742 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212848 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_56941 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212848 76212848 1 + G T SARC 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGATCCAA < 41bp 1 0.168089151213155 1 0.274055361747742 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212848 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_56941 0 0 1 2 76212840 76212859 mRNA hsa-miR-375 BIRC5 miRanda miRanda
14034 chr17 76212848 76212848 1 + G T SARC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAAAGATCCAAGAACA < 41bp 1 0.606329908039616 1 0.455682545900345 experiment 0.787340183920767 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212848 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_56942 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212848 76212848 1 + G T SARC 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAACTGGACAGAGAAAGATCCAAGAACA < 41bp 1 0.606329908039616 1 0.455682545900345 experiment 0.787340183920767 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212848 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_56942 0 0 1 2 76212840 76212859 mRNA hsa-miR-375 BIRC5 miRanda miRanda
14034 chr20 47905602 47905602 1 + G T SARC 47905584 + 47905564 47905604 41 ATCCACCTTCTTTCTTAGAAACTGGCGATGGAATATGAGAG ATCCACCTTCTTTCTTAGAAACTGGCGATGGAATATGATAG < 41bp 1 0.365862434966278 1 0.922814130783081 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47905584 chr20:47905602 . . 0 hm6A_associated_SNPs_56979 0 0 1 1 47905582 47905606 mRNA hsa-miR-205 C20orf199 miRanda miRanda
14034 chr21 42729072 42729072 1 + G T SARC 42729057 + 42729037 42729077 41 CAACCACTCTGATGCTAAGAACAACAGATATTCTGGCTGGC CAACCACTCTGATGCTAAGAACAACAGATATTCTGTCTGGC < 41bp 1 0.755152556503758 1 0.432297646999359 experiment 0.489694886992484 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 FAM3B ENSG00000183844 CDS Human protein_coding chr21:42729057 chr21:42729072 nonsynonymous SNV 0.770 4 hm6A_associated_SNPs_56984 0 0 1 1 42729068 42729092 mRNA hsa-miR-422a FAM3B miRanda miRanda
14034 chr21 42729076 42729076 1 + G T SARC 42729057 + 42729037 42729077 41 CAACCACTCTGATGCTAAGAACAACAGATATTCTGGCTGGC CAACCACTCTGATGCTAAGAACAACAGATATTCTGGCTGTC < 41bp 1 0.766714860535512 1 0.461388915777206 experiment 0.466570278928976 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 FAM3B ENSG00000183844 CDS Human protein_coding chr21:42729057 chr21:42729076 nonsynonymous SNV 0.866 5 hm6A_associated_SNPs_56985 0 0 1 1 42729068 42729092 mRNA hsa-miR-422a FAM3B miRanda miRanda
14034 chrX 73040692 73040692 1 - G T SARC 73040676 - 73040656 73040696 41 AAAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGA AAAGATAAGATAAATGGAAGACTCTTGAACTTGTGAACTGA < 41bp 1 0.372071004693148 1 0.788114070892334 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040676 chrX:73040692 . . 0 hm6A_associated_SNPs_56997 0 0 1 1 73040691 73040710 lncRNA hsa-miR-3140-3p XIST miRanda starBase2
14034 chr1 109321988 109321988 1 + G T SARC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGACCTTTCATGCAATGGC < 41bp 1 0.361949022730791 1 0.623485267162323 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321988 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57010 0 0 0 3 109321988 109322013 mRNA hsa-miR-196a STXBP3 miRanda miRanda
14034 chr1 109321988 109321988 1 + G T SARC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGACCTTTCATGCAATGGC < 41bp 1 0.361949022730791 1 0.623485267162323 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321988 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57010 0 0 0 3 109321988 109322013 mRNA hsa-miR-196b STXBP3 miRanda miRanda
14034 chr1 109321988 109321988 1 + G T SARC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGACCTTTCATGCAATGGC < 41bp 1 0.361949022730791 1 0.623485267162323 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 33 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321988 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57010 0 0 0 3 109321968 109321988 mRNA hsa-miR-488 STXBP3 miRanda miRanda
14034 chr4 115544435 115544435 1 + C A SARC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGAACTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.410973145998803 1 0.988169550895691 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544435 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57012 0 0 0 7 115544423 115544444 mRNA hsa-miR-15a UGT8 miRanda miRanda
14034 chr4 115544435 115544435 1 + C A SARC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGAACTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.410973145998803 1 0.988169550895691 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544435 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57012 0 0 0 7 115544422 115544444 mRNA hsa-miR-16 UGT8 miRanda miRanda
14034 chr4 115544435 115544435 1 + C A SARC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGAACTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.410973145998803 1 0.988169550895691 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544435 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57012 0 0 0 7 115544422 115544442 mRNA hsa-miR-214 UGT8 miRanda miRanda
14034 chr4 115544435 115544435 1 + C A SARC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGAACTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.410973145998803 1 0.988169550895691 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544435 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57012 0 0 0 7 115544423 115544444 mRNA hsa-miR-15b UGT8 miRanda miRanda
14034 chr4 115544435 115544435 1 + C A SARC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGAACTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.410973145998803 1 0.988169550895691 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544435 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57012 0 0 0 7 115544423 115544444 mRNA hsa-miR-195 UGT8 miRanda miRanda
14034 chr4 115544435 115544435 1 + C A SARC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGAACTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.410973145998803 1 0.988169550895691 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544435 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57012 0 0 0 7 115544423 115544444 mRNA hsa-miR-424 UGT8 miRanda miRanda
14034 chr4 115544435 115544435 1 + C A SARC 115544449 + 115544429 115544469 41 ATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGAT ATTTGAACTGCTGCTGGTGGACCCTAATGATATGTGTGGAT < 41bp 1 0.410973145998803 1 0.988169550895691 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544449 chr4:115544435 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57012 0 0 0 7 115544424 115544444 mRNA hsa-miR-497 UGT8 miRanda miRanda
14034 chr1 207532941 207532941 1 + G T SARC 207532935 + 207532915 207532955 41 GTTTGCTTGGGACGCTAGTAACCATGGGCTTGCTGACTTAG GTTTGCTTGGGACGCTAGTAACCATGTGCTTGCTGACTTAG < 41bp 1 0.529441895617394 1 0.199957609176636 experiment 0.941116208765212 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 CD55 ENSG00000196352 CDS Human protein_coding chr1:207532935 chr1:207532941 nonsynonymous SNV 0.043 3 hm6A_associated_SNPs_57016 0 0 1 4 207532930 207532953 mRNA hsa-miR-15b CD55 miRanda miRanda
14034 chr1 207532941 207532941 1 + G T SARC 207532935 + 207532915 207532955 41 GTTTGCTTGGGACGCTAGTAACCATGGGCTTGCTGACTTAG GTTTGCTTGGGACGCTAGTAACCATGTGCTTGCTGACTTAG < 41bp 1 0.529441895617394 1 0.199957609176636 experiment 0.941116208765212 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 CD55 ENSG00000196352 CDS Human protein_coding chr1:207532935 chr1:207532941 nonsynonymous SNV 0.043 3 hm6A_associated_SNPs_57016 0 0 1 4 207532939 207532962 mRNA hsa-miR-9 CD55 miRanda miRanda
14034 chr1 207532941 207532941 1 + G T SARC 207532935 + 207532915 207532955 41 GTTTGCTTGGGACGCTAGTAACCATGGGCTTGCTGACTTAG GTTTGCTTGGGACGCTAGTAACCATGTGCTTGCTGACTTAG < 41bp 1 0.529441895617394 1 0.199957609176636 experiment 0.941116208765212 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 CD55 ENSG00000196352 CDS Human protein_coding chr1:207532935 chr1:207532941 nonsynonymous SNV 0.043 3 hm6A_associated_SNPs_57016 0 0 1 4 207532930 207532953 mRNA hsa-miR-424 CD55 miRanda miRanda
14034 chr1 207532941 207532941 1 + G T SARC 207532935 + 207532915 207532955 41 GTTTGCTTGGGACGCTAGTAACCATGGGCTTGCTGACTTAG GTTTGCTTGGGACGCTAGTAACCATGTGCTTGCTGACTTAG < 41bp 1 0.529441895617394 1 0.199957609176636 experiment 0.941116208765212 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 CD55 ENSG00000196352 CDS Human protein_coding chr1:207532935 chr1:207532941 nonsynonymous SNV 0.043 3 hm6A_associated_SNPs_57016 0 0 1 4 207532931 207532953 mRNA hsa-miR-497 CD55 miRanda miRanda
14034 chr3 186504939 186504939 1 + T G SARC 186504941 + 186504921 186504961 41 GAAGTTGGATACACTTTGTGACTTGTACGAGACACTGACCA GAAGTTGGATACACTTTGGGACTTGTACGAGACACTGACCA < 41bp 1 0.39693353761437 1 0.948694825172424 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186504941 chr3:186504939 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57034 0 0 1 1 186504924 186504945 mRNA hsa-miR-224 EIF4A2 miRanda miRanda
14034 chr3 12458565 12458565 1 + C G SARC 12458552 + 12458532 12458572 41 CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCGAAGTTTG < 41bp 1 0.543179422612312 1 0.837138891220093 experiment 0.913641154775375 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 34 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458552 chr3:12458565 synonymous SNV . 0 hm6A_associated_SNPs_57047 0 0 1 4 12458563 12458585 mRNA hsa-miR-27a PPARG miRanda miRanda
14034 chr3 12458565 12458565 1 + C G SARC 12458552 + 12458532 12458572 41 CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCGAAGTTTG < 41bp 1 0.543179422612312 1 0.837138891220093 experiment 0.913641154775375 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 34 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458552 chr3:12458565 synonymous SNV . 0 hm6A_associated_SNPs_57047 0 0 1 4 12458563 12458585 mRNA hsa-miR-27b PPARG miRanda miRanda
14034 chr3 12458565 12458565 1 + C G SARC 12458552 + 12458532 12458572 41 CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCGAAGTTTG < 41bp 1 0.543179422612312 1 0.837138891220093 experiment 0.913641154775375 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 34 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458552 chr3:12458565 synonymous SNV . 0 hm6A_associated_SNPs_57047 0 0 1 4 12458557 12458575 mRNA hsa-miR-371-5p PPARG miRanda miRanda
14034 chr3 12458565 12458565 1 + C G SARC 12458552 + 12458532 12458572 41 CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCGAAGTTTG < 41bp 1 0.543179422612312 1 0.837138891220093 experiment 0.913641154775375 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 34 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458552 chr3:12458565 synonymous SNV . 0 hm6A_associated_SNPs_57047 0 0 1 4 12458563 12458585 mRNA hsa-miR-377 PPARG miRanda miRanda
14034 chr6 90583756 90583756 1 + T A SARC 90583760 + 90583740 90583780 41 GTCAAAATATTTATTTTTAAACATGTTAGAACTTACCAAAA GTCAAAATATTTATTTATAAACATGTTAGAACTTACCAAAA < 41bp 1 0.238132144680159 1 0.197684288024902 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 17 CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90583760 chr6:90583756 . . 0 hm6A_associated_SNPs_57053 0 0 1 1 90583756 90583781 mRNA hsa-miR-9 CASP8AP2 miRanda miRanda
14034 chr2 71653803 71653803 1 + G T SARC 71653784 + 71653764 71653804 41 CCTCGTGGTGTTGAGGGAGAACTATCTTTTGTGACATTGGA CCTCGTGGTGTTGAGGGAGAACTATCTTTTGTGACATTGTA < 41bp 1 0.733552165817311 1 0.993931174278259 experiment 0.532895668365377 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 40 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653784 chr2:71653803 nonsynonymous SNV 0.986 3 hm6A_associated_SNPs_57057 0 0 1 1 71653795 71653812 mRNA hsa-miR-216a ZNF638 miRanda miRanda
14034 chr13 80125212 80125212 1 + G T SARC 80125232 + 80125212 80125252 41 GTATGGCAGCTGCTCATAGAACAAGGTATTTCTTCTTATTG TTATGGCAGCTGCTCATAGAACAAGGTATTTCTTCTTATTG < 41bp 1 0.661194223384922 1 0.032489538192749 experiment 0.677611553230155 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 NDFIP2 ENSG00000102471 CDS Human protein_coding chr13:80125232 chr13:80125212 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_57161 0 0 1 1 80125200 80125223 mRNA hsa-miR-22 NDFIP2 miRanda miRanda
14034 chr14 95080938 95080938 1 + G A SARC 95080942 + 95080922 95080962 41 ATTAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA ATTAGCCTCCGCCAACATGGACTTCGCTTTCAGCCTGTACA < 41bp 1 0.453204328830429 1 0.998759508132935 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 17 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080942 chr14:95080938 nonsynonymous SNV 0.000 2 hm6A_associated_SNPs_57167 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr19 39973541 39973541 1 + C T SARC 39973528 + 39973508 39973548 41 CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGACGAAAATG CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGATGAAAATG < 41bp 1 0.701342338523587 1 0.0674858093261719 experiment 0.597315322952825 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39973528 chr19:39973541 nonsynonymous SNV 0.984 0 hm6A_associated_SNPs_57225 0 0 1 2 39973539 39973556 mRNA hsa-miR-96 TIMM50 miRanda miRanda
14034 chr19 39973541 39973541 1 + C T SARC 39973528 + 39973508 39973548 41 CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGACGAAAATG CCTGGTCTCCCTTGCAGGAAACAACCCGGTGGATGAAAATG < 41bp 1 0.701342338523587 1 0.0674858093261719 experiment 0.597315322952825 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39973528 chr19:39973541 nonsynonymous SNV 0.984 0 hm6A_associated_SNPs_57225 0 0 1 2 39973535 39973556 mRNA hsa-miR-1271 TIMM50 miRanda miRanda
14034 chr11 65270167 65270167 1 + G T SARC 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATTCAGAGAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.185766542132637 1 0.743529558181763 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270167 . 0.998 0 hm6A_associated_SNPs_57238 0 0 1 3 65270164 65270185 lncRNA hsa-miR-28-5p MALAT1 miRanda starBase2
14034 chr11 65270167 65270167 1 + G T SARC 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATTCAGAGAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.185766542132637 1 0.743529558181763 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270167 . 0.998 0 hm6A_associated_SNPs_57238 0 0 1 3 65270163 65270185 lncRNA hsa-miR-3139 MALAT1 miRanda starBase2
14034 chr11 65270167 65270167 1 + G T SARC 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATTCAGAGAAAACAGCTCCTTGGTGAATTGAT < 41bp 1 0.185766542132637 1 0.743529558181763 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 12 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270167 . 0.998 0 hm6A_associated_SNPs_57238 0 0 1 3 65270163 65270185 lncRNA hsa-miR-708-5p MALAT1 miRanda starBase2
14034 chr10 1053042 1053042 1 + G A SARC 1053032 + 1053012 1053052 41 GTGAATGAGGTGCTGAATAGACTGCACCTGGCTATCCCAAC GTGAATGAGGTGCTGAATAGACTGCACCTGACTATCCCAAC < 41bp 1 0.443916823671128 1 0.968786120414734 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1053032 chr10:1053042 nonsynonymous SNV 0.028 2 hm6A_associated_SNPs_57249 0 0 1 1 1053016 1053042 mRNA hsa-miR-148a GTPBP4 miRanda miRanda
14034 chr2 66775119 66775119 1 + C A SARC 66775118 + 66775098 66775138 41 GAAAAAGCAGTTGGCACAAGACACGGGACTCACCATCCTTC GAAAAAGCAGTTGGCACAAGAAACGGGACTCACCATCCTTC Direct Loss 1 0.302851914411933 1 0.753199696540833 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66775118 chr2:66775119 nonsynonymous SNV 0.992 3 hm6A_associated_SNPs_57254 0 0 0 1 66775101 66775123 mRNA hsa-miR-187 MEIS1 miRanda miRanda
14034 chr3 112714066 112714066 1 + G C SARC 112714079 + 112714059 112714099 41 AGCACCTGAAGATTTTGTTGACATGGTAGAGACCTATCTAA AGCACCTCAAGATTTTGTTGACATGGTAGAGACCTATCTAA < 41bp 1 0.747860834673372 1 0.0476338267326355 experiment 0.504278330653255 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112714079 chr3:112714066 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_57260 0 0 1 1 112714056 112714081 mRNA hsa-miR-505 GTPBP8 miRanda miRanda
14034 chr4 15589479 15589479 1 + C T SARC 15589474 + 15589454 15589494 41 CTGGCAGGGGATGAAGAAGAACATGCAGTACTATTGTGTAA CTGGCAGGGGATGAAGAAGAACATGTAGTACTATTGTGTAA < 41bp 1 0.437691892727456 1 0.191548973321915 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 CC2D2A ENSG00000048342 CDS Human protein_coding chr4:15589474 chr4:15589479 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_57293 0 0 0 1 15589461 15589483 mRNA hsa-miR-217 CC2D2A miRanda miRanda
14034 chr14 75302041 75302041 1 + C A SARC 75302036 + 75302016 75302056 41 GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGAT GCCATAGGTTTTGTGGTCGGACAGAATGATTGGGAGAAGAT < 41bp 1 0.660859304459715 1 0.256816327571869 experiment 0.678281391080571 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75302036 chr14:75302041 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57346 0 0 1 1 75302029 75302052 mRNA hsa-miR-150 YLPM1 miRanda miRanda
14034 chr4 52777280 52777280 1 + G T SARC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATTTTGG < 41bp 1 0.599122474057707 1 0.83672684431076 experiment 0.801755051884586 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777280 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57375 0 0 1 2 52777270 52777292 mRNA hsa-miR-212 DCUN1D4 miRanda miRanda
14034 chr4 52777280 52777280 1 + G T SARC 52777264 + 52777244 52777284 41 CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGG CCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATTTTGG < 41bp 1 0.599122474057707 1 0.83672684431076 experiment 0.801755051884586 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52777264 chr4:52777280 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57375 0 0 1 2 52777273 52777292 mRNA hsa-miR-132 DCUN1D4 miRanda miRanda
14034 chr4 185599481 185599481 1 + C T SARC 185599470 + 185599450 185599490 41 TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGT TTTGGAGGTTACTGAAGATAACAAATTTTTTTCTATACAGT < 41bp 1 0.575819779307615 1 0.0286171734333038 experiment 0.84836044138477 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 32 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185599470 chr4:185599481 nonsynonymous SNV 0.547 0 hm6A_associated_SNPs_57391 0 0 1 1 185599473 185599494 mRNA hsa-miR-134 CCDC111 miRanda miRanda
14034 chr7 45104166 45104166 1 + C T SARC 45104186 + 45104166 45104206 41 CCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG TCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG < 41bp 1 0.714349631753916 1 0.294558852910995 experiment 0.571300736492168 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45104186 chr7:45104166 synonymous SNV . 0 hm6A_associated_SNPs_57393 0 0 1 3 45104152 45104174 mRNA hsa-miR-125b CCM2 miRanda miRanda
14034 chr7 45104166 45104166 1 + C T SARC 45104186 + 45104166 45104206 41 CCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG TCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG < 41bp 1 0.714349631753916 1 0.294558852910995 experiment 0.571300736492168 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45104186 chr7:45104166 synonymous SNV . 0 hm6A_associated_SNPs_57393 0 0 1 3 45104151 45104174 mRNA hsa-miR-125a-5p CCM2 miRanda miRanda
14034 chr7 45104166 45104166 1 + C T SARC 45104186 + 45104166 45104206 41 CCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG TCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG < 41bp 1 0.714349631753916 1 0.294558852910995 experiment 0.571300736492168 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45104186 chr7:45104166 synonymous SNV . 0 hm6A_associated_SNPs_57393 0 0 1 3 45104165 45104187 mRNA hsa-miR-433 CCM2 miRanda miRanda
14034 chr10 69881721 69881721 1 + C A SARC 69881717 + 69881697 69881737 41 CACAGCTCCAAAAGGATTAGACCTCGTGCCTGCAAAAACCA CACAGCTCCAAAAGGATTAGACCTAGTGCCTGCAAAAACCA < 41bp 1 0.743497471570502 1 0.977300345897675 experiment 0.513005056858997 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881717 chr10:69881721 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57449 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr10 69881721 69881721 1 + C A SARC 69881734 + 69881714 69881754 41 TAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT TAGACCTAGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT < 41bp 1 0.673097640867012 1 0.992072343826294 experiment 0.653804718265976 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881734 chr10:69881721 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57450 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr11 35211462 35211462 1 + C A SARC 35211445 + 35211425 35211465 41 ATACAGAACGAATCCTGAAGACATCTACCCCAGCAACCCTA ATACAGAACGAATCCTGAAGACATCTACCCCAGCAACACTA < 41bp 1 0.557151831924355 1 0.907052278518677 experiment 0.885696336151289 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211445 chr11:35211462 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_57472 0 0 1 1 35211441 35211465 mRNA hsa-miR-296-3p CD44 miRanda miRanda
14034 chr22 41322303 41322303 1 + C T SARC 41322294 + 41322274 41322314 41 CATTTATATTCCAGAGGATGACAAAGATGCCCCAGAGAAGT CATTTATATTCCAGAGGATGACAAAGATGTCCCAGAGAAGT < 41bp 1 0.776474227301877 1 0.261523634195328 experiment 0.447051545396246 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41322294 chr22:41322303 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_57489 0 0 1 2 41322287 41322311 mRNA hsa-miR-330-5p XPNPEP3 miRanda miRanda
14034 chr22 41322303 41322303 1 + C T SARC 41322294 + 41322274 41322314 41 CATTTATATTCCAGAGGATGACAAAGATGCCCCAGAGAAGT CATTTATATTCCAGAGGATGACAAAGATGTCCCAGAGAAGT < 41bp 1 0.776474227301877 1 0.261523634195328 experiment 0.447051545396246 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 30 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41322294 chr22:41322303 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_57489 0 0 1 2 41322290 41322311 mRNA hsa-miR-326 XPNPEP3 miRanda miRanda
14034 chr16 21973817 21973817 1 + G T SARC 21973801 + 21973781 21973821 41 TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGGAAT TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTTGAAT < 41bp 1 0.679115564258797 1 0.358685851097107 experiment 0.641768871482406 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21973801 chr16:21973817 synonymous SNV . 0 hm6A_associated_SNPs_57493 0 0 1 3 21973801 21973828 mRNA hsa-miR-103 UQCRC2 miRanda miRanda
14034 chr16 21973817 21973817 1 + G T SARC 21973801 + 21973781 21973821 41 TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGGAAT TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTTGAAT < 41bp 1 0.679115564258797 1 0.358685851097107 experiment 0.641768871482406 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21973801 chr16:21973817 synonymous SNV . 0 hm6A_associated_SNPs_57493 0 0 1 3 21973801 21973828 mRNA hsa-miR-107 UQCRC2 miRanda miRanda
14034 chr16 21973817 21973817 1 + G T SARC 21973801 + 21973781 21973821 41 TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGGAAT TGTGACCGCAACAAGGGAAAACATGGCTTATACTGTTGAAT < 41bp 1 0.679115564258797 1 0.358685851097107 experiment 0.641768871482406 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21973801 chr16:21973817 synonymous SNV . 0 hm6A_associated_SNPs_57493 0 0 1 3 21973798 21973817 mRNA hsa-miR-144 UQCRC2 miRanda miRanda
14034 chr6 4053092 4053092 1 + G T SARC 4053097 + 4053077 4053117 41 ACATGCAGATATCAAGCCAGACAATATCCTGGTAAGTCAAA ACATGCAGATATCAATCCAGACAATATCCTGGTAAGTCAAA < 41bp 1 0.531355004029472 1 0.836726307868958 experiment 0.937289991941056 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4053097 chr6:4053092 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_57553 0 0 1 1 4053085 4053105 mRNA hsa-miR-190b PRPF4B miRanda miRanda
14034 chr7 66773980 66773980 1 + G T SARC 66774000 + 66773980 66774020 41 GCTTCTGTGAGTTTGTGGGGACATTGGTCTGTCGGTGCCAG TCTTCTGTGAGTTTGTGGGGACATTGGTCTGTCGGTGCCAG < 41bp 1 0.270712758778213 1 0.0791725218296051 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 1 STAG3L4 ENSG00000106610 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:66774000 chr7:66773980 . . 0 hm6A_associated_SNPs_57559 0 0 1 1 66773959 66773980 mRNA hsa-miR-874 STAG3L4 miRanda miRanda
14034 chr11 837495 837495 1 + G T SARC 837491 + 837471 837511 41 TGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTGGA TGGCAGCAACAACTCACAGGACTGTCGAGACAGTGAGTGGA < 41bp 1 0.428590685751632 1 0.996748208999634 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 25 CD151 ENSG00000177697 CDS Human protein_coding chr11:837491 chr11:837495 nonsynonymous SNV 0.977 5 hm6A_associated_SNPs_57572 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chr11 837495 837495 1 + G T SARC 837500 + 837480 837520 41 CAACTCACAGGACTGGCGAGACAGTGAGTGGATCCGCTCAC CAACTCACAGGACTGTCGAGACAGTGAGTGGATCCGCTCAC < 41bp 1 0.513871184338978 1 0.987312912940979 experiment 0.972257631322044 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 CD151 ENSG00000177697 CDS Human protein_coding chr11:837500 chr11:837495 nonsynonymous SNV 0.977 5 hm6A_associated_SNPs_57573 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chrX 13774718 13774718 1 + G T SARC 13774736 + 13774716 13774756 41 AAGCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG AATCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG < 41bp 1 0.587546206124496 1 0.290665328502655 experiment 0.824907587751008 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 OFD1 ENSG00000046651 CDS Human protein_coding chrX:13774736 chrX:13774718 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_57622 0 0 0 4 13774705 13774729 mRNA hsa-miR-320a OFD1 miRanda miRanda
14034 chrX 13774718 13774718 1 + G T SARC 13774736 + 13774716 13774756 41 AAGCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG AATCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG < 41bp 1 0.587546206124496 1 0.290665328502655 experiment 0.824907587751008 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 OFD1 ENSG00000046651 CDS Human protein_coding chrX:13774736 chrX:13774718 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_57622 0 0 0 4 13774705 13774729 mRNA hsa-miR-320b OFD1 miRanda miRanda
14034 chrX 13774718 13774718 1 + G T SARC 13774736 + 13774716 13774756 41 AAGCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG AATCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG < 41bp 1 0.587546206124496 1 0.290665328502655 experiment 0.824907587751008 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 OFD1 ENSG00000046651 CDS Human protein_coding chrX:13774736 chrX:13774718 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_57622 0 0 0 4 13774707 13774729 mRNA hsa-miR-320c OFD1 miRanda miRanda
14034 chrX 13774718 13774718 1 + G T SARC 13774736 + 13774716 13774756 41 AAGCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG AATCCCAGTCTTTGGCAATAACAAAACAAAACCATATGCTG < 41bp 1 0.587546206124496 1 0.290665328502655 experiment 0.824907587751008 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 OFD1 ENSG00000046651 CDS Human protein_coding chrX:13774736 chrX:13774718 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_57622 0 0 0 4 13774708 13774729 mRNA hsa-miR-320d OFD1 miRanda miRanda
14034 chr7 86815164 86815164 1 + G T SARC 86815177 + 86815157 86815197 41 TGATGTAGCTGATGAAAATGACATTAACTGGGATCTGTTAG TGATGTATCTGATGAAAATGACATTAACTGGGATCTGTTAG < 41bp 1 0.778278404962171 1 0.740248799324036 experiment 0.443443190075658 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 8 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86815177 chr7:86815164 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_57667 0 0 1 2 86815145 86815166 mRNA hsa-miR-221 DMTF1 miRanda miRanda
14034 chr7 86815164 86815164 1 + G T SARC 86815177 + 86815157 86815197 41 TGATGTAGCTGATGAAAATGACATTAACTGGGATCTGTTAG TGATGTATCTGATGAAAATGACATTAACTGGGATCTGTTAG < 41bp 1 0.778278404962171 1 0.740248799324036 experiment 0.443443190075658 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 8 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86815177 chr7:86815164 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_57667 0 0 1 2 86815147 86815166 mRNA hsa-miR-222 DMTF1 miRanda miRanda
14034 chr11 125514418 125514418 1 + G T SARC 125514437 + 125514417 125514457 41 AGCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTG ATCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTG < 41bp 1 0.593526906738757 1 0.673404216766357 experiment 0.812946186522487 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514437 chr11:125514418 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_57674 0 0 1 1 125514418 125514442 mRNA hsa-miR-187 CHEK1 miRanda miRanda
14034 chr17 35307664 35307664 1 + G T SARC 35307645 + 35307625 35307665 41 ACAAAAGGTATTGCGGCAAAACCACCTCTAGAAAAGCATGG ACAAAAGGTATTGCGGCAAAACCACCTCTAGAAAAGCATTG < 41bp 1 0.227229908564293 1 0.521604657173157 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 AATF ENSG00000108270 CDS Human other chr17:35307645 chr17:35307664 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_57718 0 0 1 3 35307658 35307678 mRNA hsa-miR-135a AATF miRanda miRanda
14034 chr17 35307664 35307664 1 + G T SARC 35307645 + 35307625 35307665 41 ACAAAAGGTATTGCGGCAAAACCACCTCTAGAAAAGCATGG ACAAAAGGTATTGCGGCAAAACCACCTCTAGAAAAGCATTG < 41bp 1 0.227229908564293 1 0.521604657173157 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 AATF ENSG00000108270 CDS Human other chr17:35307645 chr17:35307664 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_57718 0 0 1 3 35307660 35307684 mRNA hsa-miR-150 AATF miRanda miRanda
14034 chr17 35307664 35307664 1 + G T SARC 35307645 + 35307625 35307665 41 ACAAAAGGTATTGCGGCAAAACCACCTCTAGAAAAGCATGG ACAAAAGGTATTGCGGCAAAACCACCTCTAGAAAAGCATTG < 41bp 1 0.227229908564293 1 0.521604657173157 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 AATF ENSG00000108270 CDS Human other chr17:35307645 chr17:35307664 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_57718 0 0 1 3 35307658 35307678 mRNA hsa-miR-135b AATF miRanda miRanda
14034 chr7 104747869 104747869 1 + G A SARC 104747866 + 104747846 104747886 41 CTTTTAGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAA CTTTTAGAAATTCTAATTTAACTAAACTGGGTCTGCAAGAA < 41bp 1 0.75091035447294 1 0.935078978538513 experiment 0.49817929105412 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747866 chr7:104747869 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_57723 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chr7 104747869 104747869 1 + G A SARC 104747871 + 104747851 104747891 41 AGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAAATAAA AGAAATTCTAATTTAACTAAACTGGGTCTGCAAGAAATAAA < 41bp 1 0.682260907280494 1 0.981684148311615 experiment 0.635478185439012 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 19 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747871 chr7:104747869 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_57724 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chr2 27260014 27260014 1 + T C SARC 27260010 + 27259990 27260030 41 GGACTTCTTCCCACTTCTGGACTTTGCCTATATGCCGAACA GGACTTCTTCCCACTTCTGGACTTCGCCTATATGCCGAACA < 41bp 1 0.54330046159057 1 0.985316395759583 experiment 0.913399076818859 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27260010 chr2:27260014 synonymous SNV . 0 hm6A_associated_SNPs_57734 0 0 1 1 27260011 27260032 mRNA hsa-miR-375 TMEM214 miRanda miRanda
14034 chr2 27260014 27260014 1 + T C SARC 27260028 + 27260008 27260048 41 GGACTTTGCCTATATGCCGAACAACTCCCTGACACCCAGGT GGACTTCGCCTATATGCCGAACAACTCCCTGACACCCAGGT < 41bp 1 0.773988103173842 1 0.944372177124023 experiment 0.452023793652317 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27260028 chr2:27260014 synonymous SNV . 0 hm6A_associated_SNPs_57735 0 0 1 1 27260011 27260032 mRNA hsa-miR-375 TMEM214 miRanda miRanda
14034 chr3 12458497 12458497 1 + G A SKCM 12458512 + 12458492 12458532 41 CCGAGGGCCAAGGCTTCATGACAAGGGAGTTTCTAAAGAGC CCGAGAGCCAAGGCTTCATGACAAGGGAGTTTCTAAAGAGC < 41bp 1 0.790920962296899 1 0.740413129329681 experiment 0.418158075406202 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 6 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458512 chr3:12458497 nonsynonymous SNV 0.993 5 hm6A_associated_SNPs_57781 0 0 1 1 12458481 12458502 mRNA hsa-miR-328 PPARG miRanda miRanda
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAAAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170367079757724 1 0.709303081035614 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 12 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046480 . . 0 hm6A_associated_SNPs_57835 0 0 1 8 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046480 73046480 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAAAACCCTAAACCCTACCTCTTTT < 41bp 1 0.232622756061246 1 0.698409795761108 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046480 . . 0 hm6A_associated_SNPs_57836 0 0 1 8 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chr17 27185489 27185489 1 + C T SKCM 27185500 + 27185480 27185520 41 CCCTAGTGTCCTGGTCATGAACAAGGTGAGCACTACCCACC CCCTAGTGTTCTGGTCATGAACAAGGTGAGCACTACCCACC < 41bp 1 0.673759236217028 1 0.569837629795074 experiment 0.652481527565944 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 10 ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27185500 chr17:27185489 synonymous SNV . 0 hm6A_associated_SNPs_57859 0 0 1 1 27185473 27185493 mRNA hsa-miR-873 ERAL1 miRanda miRanda
14034 chr11 6592235 6592235 1 + C T SKCM 6592215 + 6592195 6592235 41 TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAT < 41bp 1 0.584718926368826 1 0.99275803565979 experiment 0.830562147262348 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592215 chr11:6592235 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_57867 0 0 0 1 6592221 6592242 mRNA hsa-miR-210 DNHD1 miRanda miRanda
14034 chr19 44679947 44679947 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCTTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.504164535869009 1 0.815504789352417 experiment 0.991670928261981 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679947 synonymous SNV . 0 hm6A_associated_SNPs_57886 0 0 1 6 44679927 44679948 mRNA hsa-miR-1 ZNF226 miRanda miRanda
14034 chr19 44679947 44679947 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCTTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.504164535869009 1 0.815504789352417 experiment 0.991670928261981 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679947 synonymous SNV . 0 hm6A_associated_SNPs_57886 0 0 1 6 44679927 44679948 mRNA hsa-miR-206 ZNF226 miRanda miRanda
14034 chr19 44679947 44679947 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCTTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.504164535869009 1 0.815504789352417 experiment 0.991670928261981 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679947 synonymous SNV . 0 hm6A_associated_SNPs_57886 0 0 1 6 44679943 44679962 mRNA hsa-miR-378 ZNF226 miRanda miRanda
14034 chr19 44679947 44679947 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCTTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.504164535869009 1 0.815504789352417 experiment 0.991670928261981 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679947 synonymous SNV . 0 hm6A_associated_SNPs_57886 0 0 1 6 44679942 44679962 mRNA hsa-miR-422a ZNF226 miRanda miRanda
14034 chr19 44679947 44679947 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCTTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.504164535869009 1 0.815504789352417 experiment 0.991670928261981 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679947 synonymous SNV . 0 hm6A_associated_SNPs_57886 0 0 1 6 44679931 44679948 mRNA hsa-miR-613 ZNF226 miRanda miRanda
14034 chr19 44679947 44679947 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTCTTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.504164535869009 1 0.815504789352417 experiment 0.991670928261981 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679947 synonymous SNV . 0 hm6A_associated_SNPs_57886 0 0 1 6 44679939 44679967 mRNA hsa-miR-216b ZNF226 miRanda miRanda
14034 chr19 44679946 44679946 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTTCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.501758505997771 1 0.817197620868683 experiment 0.996482988004459 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679946 synonymous SNV . 0 hm6A_associated_SNPs_57890 0 0 1 6 44679927 44679948 mRNA hsa-miR-1 ZNF226 miRanda miRanda
14034 chr19 44679946 44679946 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTTCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.501758505997771 1 0.817197620868683 experiment 0.996482988004459 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679946 synonymous SNV . 0 hm6A_associated_SNPs_57890 0 0 1 6 44679927 44679948 mRNA hsa-miR-206 ZNF226 miRanda miRanda
14034 chr19 44679946 44679946 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTTCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.501758505997771 1 0.817197620868683 experiment 0.996482988004459 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679946 synonymous SNV . 0 hm6A_associated_SNPs_57890 0 0 1 6 44679943 44679962 mRNA hsa-miR-378 ZNF226 miRanda miRanda
14034 chr19 44679946 44679946 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTTCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.501758505997771 1 0.817197620868683 experiment 0.996482988004459 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679946 synonymous SNV . 0 hm6A_associated_SNPs_57890 0 0 1 6 44679942 44679962 mRNA hsa-miR-422a ZNF226 miRanda miRanda
14034 chr19 44679946 44679946 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTTCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.501758505997771 1 0.817197620868683 experiment 0.996482988004459 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679946 synonymous SNV . 0 hm6A_associated_SNPs_57890 0 0 1 6 44679931 44679948 mRNA hsa-miR-613 ZNF226 miRanda miRanda
14034 chr19 44679946 44679946 1 + C T SKCM 44679950 + 44679930 44679970 41 CTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAAC CTTGGAGGAAAACATTTCTGACTGAGTCACAGAGATTGAAC < 41bp 1 0.501758505997771 1 0.817197620868683 experiment 0.996482988004459 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679950 chr19:44679946 synonymous SNV . 0 hm6A_associated_SNPs_57890 0 0 1 6 44679939 44679967 mRNA hsa-miR-216b ZNF226 miRanda miRanda
14034 chr10 22029049 22029049 1 + C T SKCM 22029048 + 22029028 22029068 41 CAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAA CAGCAGCTGCAGATCCCTGGATCAACACAAATACCCATAAA Direct Loss 1 0.589619903214326 1 0.929794430732727 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 MLLT10 ENSG00000078403 CDS Human protein_coding chr10:22029048 chr10:22029049 nonsynonymous SNV 0.004 0 hm6A_associated_SNPs_57897 0 0 1 2 22029032 22029053 mRNA hsa-miR-133a MLLT10 miRanda miRanda
14034 chr10 22029049 22029049 1 + C T SKCM 22029048 + 22029028 22029068 41 CAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAA CAGCAGCTGCAGATCCCTGGATCAACACAAATACCCATAAA Direct Loss 1 0.589619903214326 1 0.929794430732727 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 MLLT10 ENSG00000078403 CDS Human protein_coding chr10:22029048 chr10:22029049 nonsynonymous SNV 0.004 0 hm6A_associated_SNPs_57897 0 0 1 2 22029032 22029053 mRNA hsa-miR-133b MLLT10 miRanda miRanda
14034 chr15 58001015 58001015 1 + G A SKCM 58001017 + 58000997 58001037 41 GAAGTTAGAAGAAAAAGTGAACTGTTTAACCCTGTTAGTTT GAAGTTAGAAGAAAAAGTAAACTGTTTAACCCTGTTAGTTT < 41bp 1 0.757701650845147 1 0.966690599918365 experiment 0.484596698309707 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58001017 chr15:58001015 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_57906 0 0 1 4 58001003 58001023 mRNA hsa-miR-212 GRINL1A miRanda miRanda
14034 chr15 58001015 58001015 1 + G A SKCM 58001017 + 58000997 58001037 41 GAAGTTAGAAGAAAAAGTGAACTGTTTAACCCTGTTAGTTT GAAGTTAGAAGAAAAAGTAAACTGTTTAACCCTGTTAGTTT < 41bp 1 0.757701650845147 1 0.966690599918365 experiment 0.484596698309707 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58001017 chr15:58001015 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_57906 0 0 1 4 58001002 58001023 mRNA hsa-miR-132 GRINL1A miRanda miRanda
14034 chr15 58001015 58001015 1 + G A SKCM 58001017 + 58000997 58001037 41 GAAGTTAGAAGAAAAAGTGAACTGTTTAACCCTGTTAGTTT GAAGTTAGAAGAAAAAGTAAACTGTTTAACCCTGTTAGTTT < 41bp 1 0.757701650845147 1 0.966690599918365 experiment 0.484596698309707 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58001017 chr15:58001015 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_57906 0 0 1 4 58001014 58001035 mRNA hsa-miR-194 GRINL1A miRanda miRanda
14034 chr15 58001015 58001015 1 + G A SKCM 58001017 + 58000997 58001037 41 GAAGTTAGAAGAAAAAGTGAACTGTTTAACCCTGTTAGTTT GAAGTTAGAAGAAAAAGTAAACTGTTTAACCCTGTTAGTTT < 41bp 1 0.757701650845147 1 0.966690599918365 experiment 0.484596698309707 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58001017 chr15:58001015 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_57906 0 0 1 4 58001009 58001030 mRNA hsa-miR-296-3p GRINL1A miRanda miRanda
14034 chr10 22029050 22029050 1 + C T SKCM 22029048 + 22029028 22029068 41 CAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAA CAGCAGCTGCAGATCCCTGGACTAACACAAATACCCATAAA < 41bp 1 0.790919628360597 1 0.984566330909729 experiment 0.418160743278806 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MLLT10 ENSG00000078403 CDS Human protein_coding chr10:22029048 chr10:22029050 nonsynonymous SNV 0.005 1 hm6A_associated_SNPs_57907 0 0 1 2 22029032 22029053 mRNA hsa-miR-133a MLLT10 miRanda miRanda
14034 chr10 22029050 22029050 1 + C T SKCM 22029048 + 22029028 22029068 41 CAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAA CAGCAGCTGCAGATCCCTGGACTAACACAAATACCCATAAA < 41bp 1 0.790919628360597 1 0.984566330909729 experiment 0.418160743278806 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 23 MLLT10 ENSG00000078403 CDS Human protein_coding chr10:22029048 chr10:22029050 nonsynonymous SNV 0.005 1 hm6A_associated_SNPs_57907 0 0 1 2 22029032 22029053 mRNA hsa-miR-133b MLLT10 miRanda miRanda
14034 chr16 58036463 58036463 1 + C T SKCM 58036482 + 58036462 58036502 41 CCTGAAGATGACAGCACAAAACACGGGGGACGGGTGCGCAC CTTGAAGATGACAGCACAAAACACGGGGGACGGGTGCGCAC < 41bp 1 0.704357957841666 1 0.17519137263298 experiment 0.591284084316669 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 USB1 ENSG00000103005 CDS Human protein_coding chr16:58036482 chr16:58036463 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_57936 0 0 1 1 58036459 58036480 mRNA hsa-miR-218 C16orf57 miRanda miRanda
14034 chr7 17382555 17382555 1 + G A SKCM 17382569 + 17382549 17382589 41 AGAATGGAGTTTTAAATGAAACATATCCAGCTGAATTAAAT AGAATGAAGTTTTAAATGAAACATATCCAGCTGAATTAAAT < 41bp 1 0.758758783923421 1 0.835945844650269 experiment 0.482482432153157 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 AHR ENSG00000106546 CDS Human protein_coding chr7:17382569 chr7:17382555 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_57983 0 0 0 2 17382545 17382558 mRNA hsa-miR-136 AHR miRanda miRanda
14034 chr7 17382555 17382555 1 + G A SKCM 17382569 + 17382549 17382589 41 AGAATGGAGTTTTAAATGAAACATATCCAGCTGAATTAAAT AGAATGAAGTTTTAAATGAAACATATCCAGCTGAATTAAAT < 41bp 1 0.758758783923421 1 0.835945844650269 experiment 0.482482432153157 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 AHR ENSG00000106546 CDS Human protein_coding chr7:17382569 chr7:17382555 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_57983 0 0 0 2 17382555 17382576 mRNA hsa-miR-190 AHR miRanda miRanda
14034 chr2 29366724 29366724 1 + C T SKCM 29366705 + 29366685 29366725 41 TGCGGTGCCTCTGTCATGTAACATCTCAAAGGCCATGCTCC TGCGGTGCCTCTGTCATGTAACATCTCAAAGGCCATGCTTC < 41bp 1 0.532010852558157 1 0.436703354120255 experiment 0.935978294883686 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 40 CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29366705 chr2:29366724 synonymous SNV . 0 hm6A_associated_SNPs_57987 0 0 1 1 29366724 29366747 mRNA hsa-miR-148b CLIP4 miRanda miRanda
14034 chr2 182765502 182765502 1 + G A SKCM 182765498 + 182765478 182765518 41 CTTGGATTTGGACGTGATGAACCAGATATTGCTTCTAAAAT CTTGGATTTGGACGTGATGAACCAAATATTGCTTCTAAAAT < 41bp 1 0.217923475243515 1 0.879830837249756 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control 25 SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182765498 chr2:182765502 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_57990 0 0 1 1 182765500 182765520 mRNA hsa-miR-590-3p SSFA2 miRanda miRanda
14034 chr12 3702313 3702313 1 + G A SKCM 3702303 + 3702283 3702323 41 GTAGACTTGGATTTTAAGGGACAGCTGTGTGAAACATCTGT GTAGACTTGGATTTTAAGGGACAGCTGTGTAAAACATCTGT < 41bp 1 0.72888319740804 1 0.982313513755798 experiment 0.54223360518392 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 31 PRMT8 ENSG00000111218 CDS Human protein_coding chr12:3702303 chr12:3702313 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_57997 0 0 0 1 3702294 3702315 mRNA hsa-miR-377 PRMT8 miRanda miRanda
14034 chr6 3137609 3137609 1 + T A SKCM 3137628 + 3137608 3137648 41 TTTCCAAATGGAGTGAGAGAACAAGAAAGCCTCTAGAAGCC TATCCAAATGGAGTGAGAGAACAAGAAAGCCTCTAGAAGCC < 41bp 1 0.763549592909531 1 0.0561939179897308 experiment 0.472900814180937 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 BPHL ENSG00000137274 CDS Human protein_coding chr6:3137628 chr6:3137609 synonymous SNV . 0 hm6A_associated_SNPs_58044 0 0 1 3 3137599 3137621 mRNA hsa-miR-136 BPHL miRanda miRanda
14034 chr6 3137609 3137609 1 + T A SKCM 3137628 + 3137608 3137648 41 TTTCCAAATGGAGTGAGAGAACAAGAAAGCCTCTAGAAGCC TATCCAAATGGAGTGAGAGAACAAGAAAGCCTCTAGAAGCC < 41bp 1 0.763549592909531 1 0.0561939179897308 experiment 0.472900814180937 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 BPHL ENSG00000137274 CDS Human protein_coding chr6:3137628 chr6:3137609 synonymous SNV . 0 hm6A_associated_SNPs_58044 0 0 1 3 3137596 3137612 mRNA hsa-miR-494 BPHL miRanda miRanda
14034 chr6 3137609 3137609 1 + T A SKCM 3137628 + 3137608 3137648 41 TTTCCAAATGGAGTGAGAGAACAAGAAAGCCTCTAGAAGCC TATCCAAATGGAGTGAGAGAACAAGAAAGCCTCTAGAAGCC < 41bp 1 0.763549592909531 1 0.0561939179897308 experiment 0.472900814180937 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 BPHL ENSG00000137274 CDS Human protein_coding chr6:3137628 chr6:3137609 synonymous SNV . 0 hm6A_associated_SNPs_58044 0 0 1 3 3137596 3137610 mRNA hsa-miR-543 BPHL miRanda miRanda
14034 chr14 95080940 95080940 1 + G A SKCM 95080942 + 95080922 95080962 41 ATTAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA ATTAGCCTCCGCCAACGTAGACTTCGCTTTCAGCCTGTACA < 41bp 1 0.279759866309249 1 0.991008758544922 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 19 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080942 chr14:95080940 synonymous SNV . 0 hm6A_associated_SNPs_58069 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr11 65269103 65269103 1 + T C SKCM 65269085 + 65269065 65269105 41 TGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGT TGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGCGT < 41bp 1 0.0721763045429481 1 0.877825736999512 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269085 chr11:65269103 . . 0 hm6A_associated_SNPs_58121 0 0 1 1 65269083 65269105 lncRNA hsa-miR-483-3p MALAT1 miRanda starBase2
14034 chr3 148889998 148889998 1 + C T SKCM 148889997 + 148889977 148890017 41 CTCTATTGCAGTCGAAAGAAACCATTGACTTAAAGGTATCA CTCTATTGCAGTCGAAAGAAATCATTGACTTAAAGGTATCA Direct Loss 1 0.458039054488106 1 0.602038681507111 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148889997 chr3:148889998 nonsynonymous SNV 0.951 0 hm6A_associated_SNPs_58131 0 0 1 1 148889987 148890008 mRNA hsa-miR-224 HPS3 miRanda miRanda
14034 chr3 148889998 148889998 1 + C T SKCM 148890004 + 148889984 148890024 41 GCAGTCGAAAGAAACCATTGACTTAAAGGTATCATTTGAAA GCAGTCGAAAGAAATCATTGACTTAAAGGTATCATTTGAAA < 41bp 1 0.740893573907982 1 0.887599229812622 experiment 0.518212852184036 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148890004 chr3:148889998 nonsynonymous SNV 0.951 0 hm6A_associated_SNPs_58132 0 0 1 1 148889987 148890008 mRNA hsa-miR-224 HPS3 miRanda miRanda
14034 chr14 95081348 95081348 1 + G A SKCM 95081340 + 95081320 95081360 41 ACGACTACGTGAAGAATGGAACTAGGGGGAAAATCACAGAT ACGACTACGTGAAGAATGGAACTAGGGGAAAAATCACAGAT < 41bp 1 0.448891077115697 1 0.998499035835266 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 29 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081340 chr14:95081348 synonymous SNV . 0 hm6A_associated_SNPs_58136 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr17 61499273 61499273 1 + C T SKCM 61499283 + 61499263 61499303 41 GGGCAGACATCCCCTATCAAACCAAAGAGACCGTTCGTGGA GGGCAGACATTCCCTATCAAACCAAAGAGACCGTTCGTGGA < 41bp 1 0.595704787920805 1 0.975548148155212 experiment 0.80859042415839 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 11 TANC2 ENSG00000170921 CDS Human protein_coding chr17:61499283 chr17:61499273 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_58175 0 0 0 1 61499268 61499290 mRNA hsa-miR-9 TANC2 miRanda miRanda
14034 chrX 73046700 73046700 1 - C T SKCM 73046690 - 73046670 73046710 41 CCTAAGAACTGAGACTTGTGACACAAGGCCAACGACCTAAG CCTAAGAACTAAGACTTGTGACACAAGGCCAACGACCTAAG < 41bp 1 0.388554903463261 1 0.854292869567871 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046690 chrX:73046700 . . 0 hm6A_associated_SNPs_58253 0 0 1 2 73046689 73046706 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chrX 73046700 73046700 1 - C T SKCM 73046690 - 73046670 73046710 41 CCTAAGAACTGAGACTTGTGACACAAGGCCAACGACCTAAG CCTAAGAACTAAGACTTGTGACACAAGGCCAACGACCTAAG < 41bp 1 0.388554903463261 1 0.854292869567871 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046690 chrX:73046700 . . 0 hm6A_associated_SNPs_58253 0 0 1 2 73046684 73046704 lncRNA hsa-miR-599 XIST miRanda starBase2
14034 chrX 73046700 73046700 1 - C T SKCM 73046697 - 73046677 73046717 41 TGGAAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACG TGGAAGGCCTAAGAACTAAGACTTGTGACACAAGGCCAACG < 41bp 1 0.593813980119827 1 0.959380269050598 experiment 0.812372039760346 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046697 chrX:73046700 . . 0 hm6A_associated_SNPs_58254 0 0 1 2 73046689 73046706 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chrX 73046700 73046700 1 - C T SKCM 73046697 - 73046677 73046717 41 TGGAAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACG TGGAAGGCCTAAGAACTAAGACTTGTGACACAAGGCCAACG < 41bp 1 0.593813980119827 1 0.959380269050598 experiment 0.812372039760346 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046697 chrX:73046700 . . 0 hm6A_associated_SNPs_58254 0 0 1 2 73046684 73046704 lncRNA hsa-miR-599 XIST miRanda starBase2
14034 chrX 73046700 73046700 1 - C T SKCM 73046703 - 73046683 73046723 41 GACACATGGAAGGCCTAAGAACTGAGACTTGTGACACAAGG GACACATGGAAGGCCTAAGAACTAAGACTTGTGACACAAGG < 41bp 1 0.726706772582729 1 0.944258451461792 experiment 0.546586454834541 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046703 chrX:73046700 . . 0 hm6A_associated_SNPs_58255 0 0 1 2 73046689 73046706 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chrX 73046700 73046700 1 - C T SKCM 73046703 - 73046683 73046723 41 GACACATGGAAGGCCTAAGAACTGAGACTTGTGACACAAGG GACACATGGAAGGCCTAAGAACTAAGACTTGTGACACAAGG < 41bp 1 0.726706772582729 1 0.944258451461792 experiment 0.546586454834541 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046703 chrX:73046700 . . 0 hm6A_associated_SNPs_58255 0 0 1 2 73046684 73046704 lncRNA hsa-miR-599 XIST miRanda starBase2
14034 chr1 11718602 11718602 1 + G A SKCM 11718616 + 11718596 11718636 41 CCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT CCTCAAATCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT < 41bp 1 0.115607367146611 1 0.792523384094238 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 7 FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718616 chr1:11718602 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58288 0 0 1 2 11718589 11718609 mRNA hsa-miR-378 FBXO44 miRanda miRanda
14034 chr1 11718602 11718602 1 + G A SKCM 11718616 + 11718596 11718636 41 CCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT CCTCAAATCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT < 41bp 1 0.115607367146611 1 0.792523384094238 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 7 FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718616 chr1:11718602 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58288 0 0 1 2 11718588 11718609 mRNA hsa-miR-422a FBXO44 miRanda miRanda
14034 chr14 95081394 95081394 1 + G A SKCM 95081377 + 95081357 95081397 41 AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGATCC < 41bp 1 0.215743028318608 1 0.995571494102478 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 38 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081377 chr14:95081394 nonsynonymous SNV 0.606 1 hm6A_associated_SNPs_58338 0 0 1 1 95081383 95081404 mRNA hsa-miR-197 SERPINA3 miRanda miRanda
14034 chr14 95081394 95081394 1 + G A SKCM 95081385 + 95081365 95081405 41 TCAAGGACCTTGACTCGCAGACAATGATGGTCCTGGTGAAT TCAAGGACCTTGACTCGCAGACAATGATGATCCTGGTGAAT < 41bp 1 0.664174686210108 1 0.992024540901184 experiment 0.671650627579784 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|26593424;GSE73405;miCLIP;HepG2;Control 30 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081385 chr14:95081394 nonsynonymous SNV 0.606 1 hm6A_associated_SNPs_58339 0 0 1 1 95081383 95081404 mRNA hsa-miR-197 SERPINA3 miRanda miRanda
14034 chr9 139310781 139310781 1 + G A SKCM 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCAGTTTAAGCTGGAGGACCTGAACCTGCGGCCTGACC < 41bp 1 0.601609075864489 1 0.955283224582672 experiment 0.796781848271022 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310781 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_58349 0 0 1 1 139310765 139310784 mRNA hsa-miR-371-5p PMPCA miRanda miRanda
14034 chr9 139310781 139310781 1 + G A SKCM 139310797 + 139310777 139310817 41 GTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC GTTTAAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC < 41bp 1 0.628669136735641 1 0.953973948955536 experiment 0.742661726528719 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310797 chr9:139310781 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_58350 0 0 1 1 139310765 139310784 mRNA hsa-miR-371-5p PMPCA miRanda miRanda
14034 chr11 34475378 34475378 1 + C T SKCM 34475386 + 34475366 34475406 41 GATCGGGGGATTCCAGATGGACATCGCCACATGAATGGATA GATCGGGGGATTTCAGATGGACATCGCCACATGAATGGATA < 41bp 1 0.730755540354241 1 0.528462707996368 experiment 0.538488919291518 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 13 CAT ENSG00000121691 CDS Human protein_coding chr11:34475386 chr11:34475378 nonsynonymous SNV 0.750 5 hm6A_associated_SNPs_58355 0 0 1 1 34475376 34475398 mRNA hsa-miR-299-3p CAT miRanda miRanda
14034 chr9 139563060 139563060 1 + C T SKCM 139563041 + 139563021 139563061 41 TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTCG TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTTG < 41bp 1 0.148422311018404 1 0.379247009754181 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139563041 chr9:139563060 synonymous SNV . 0 hm6A_associated_SNPs_58398 0 0 1 2 139563051 139563074 mRNA hsa-miR-362-3p EGFL7 miRanda miRanda
14034 chr9 139563060 139563060 1 + C T SKCM 139563041 + 139563021 139563061 41 TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTCG TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTTG < 41bp 1 0.148422311018404 1 0.379247009754181 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139563041 chr9:139563060 synonymous SNV . 0 hm6A_associated_SNPs_58398 0 0 1 2 139563051 139563074 mRNA hsa-miR-329 EGFL7 miRanda miRanda
14034 chr1 93299188 93299188 1 + C T SKCM 93299194 + 93299174 93299214 41 ACAGGATGATAGTTCGTGTGACAAACAGAGATATCATTTGT ACAGGATGATAGTTTGTGTGACAAACAGAGATATCATTTGT < 41bp 1 0.657105201361684 1 0.129688531160355 experiment 0.685789597276632 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299194 chr1:93299188 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_58405 0 0 1 1 93299172 93299195 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr1 93299188 93299188 1 + C T SKCM 93299198 + 93299178 93299218 41 GATGATAGTTCGTGTGACAAACAGAGATATCATTTGTCAGG GATGATAGTTTGTGTGACAAACAGAGATATCATTTGTCAGG < 41bp 1 0.423447257033605 1 0.0741452872753143 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299198 chr1:93299188 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_58406 0 0 1 1 93299172 93299195 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr17 76396799 76396799 1 + G A SKCM 76396796 + 76396776 76396816 41 CTACTTCACCAACCGCCAGGACCGCTACGTGTTCCTGCAGG CTACTTCACCAACCGCCAGGACCACTACGTGTTCCTGCAGG < 41bp 1 0.209095730596199 1 0.712688565254211 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 PGS1 ENSG00000087157 CDS Human protein_coding chr17:76396796 chr17:76396799 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_58476 0 0 1 1 76396794 76396813 mRNA hsa-miR-873 PGS1 miRanda miRanda
14034 chrX 73044327 73044327 1 - G A SKCM 73044332 - 73044312 73044352 41 TTTGATTGCCTACTATGTGAACTCACTGTTAAAGGCACTGA TTTGATTGCCTACTATGTGAACTCATTGTTAAAGGCACTGA < 41bp 1 0.552010636885444 1 0.297040045261383 experiment 0.895978726229111 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044332 chrX:73044327 . . 0 hm6A_associated_SNPs_58540 0 0 1 1 73044325 73044351 lncRNA hsa-miR-3174 XIST miRanda starBase2
14034 chr8 32621649 32621649 1 + A C SKCM 32621645 + 32621625 32621665 41 ATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATT ATAGCCGGCGGGCCAAAAGAACCACGCCCAATGGCCACATT < 41bp 1 0.55933366114965 1 0.999402403831482 experiment 0.8813326777007 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 25 NRG1 ENSG00000157168 CDS Human protein_coding chr8:32621645 chr8:32621649 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_58563 0 0 0 1 32621643 32621665 mRNA hsa-miR-455-5p NRG1 miRanda miRanda
14034 chr14 95080941 95080941 1 + G A SKCM 95080942 + 95080922 95080962 41 ATTAGCCTCCGCCAACGTGGACTTCGCTTTCAGCCTGTACA ATTAGCCTCCGCCAACGTGAACTTCGCTTTCAGCCTGTACA < 41bp 1 0.307798642093809 1 0.9952152967453 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 20 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080942 chr14:95080941 nonsynonymous SNV 0.082 1 hm6A_associated_SNPs_58616 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr6 32945938 32945938 1 + C T SKCM 32945920 + 32945900 32945940 41 TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCA TAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCTCA < 41bp 1 0.547781827831912 1 0.885217547416687 experiment 0.904436344336176 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945920 chr6:32945938 synonymous SNV . 0 hm6A_associated_SNPs_58624 0 0 1 1 32945925 32945946 mRNA hsa-miR-504 BRD2 miRanda miRanda
14034 chr17 42744063 42744063 1 + G T SKCM 42744051 + 42744031 42744071 41 AGACAAATGATACAGCTAAGACAACATTCCAAGAATATCCA AGACAAATGATACAGCTAAGACAACATTCCAATAATATCCA < 41bp 1 0.778550719677798 1 0.88155323266983 experiment 0.442898560644403 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744051 chr17:42744063 stopgain 1.000 0 hm6A_associated_SNPs_58625 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr17 42744063 42744063 1 + G T SKCM 42744082 + 42744062 42744102 41 AGAATATCCACTTATCAAAAACTGTTTTACACCCCAAACTG ATAATATCCACTTATCAAAAACTGTTTTACACCCCAAACTG < 41bp 1 0.621269334090892 1 0.917465448379517 experiment 0.757461331818216 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744082 chr17:42744063 stopgain 1.000 0 hm6A_associated_SNPs_58626 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr10 70507015 70507015 1 + C T SKCM 70507018 + 70506998 70507038 41 GGAATGCACAGAGAATTCAAACACTACCAAATCAGGTACAG GGAATGCACAGAGAATTTAAACACTACCAAATCAGGTACAG < 41bp 1 0.495682715569493 1 0.649486303329468 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507018 chr10:70507015 stopgain 1.000 1 hm6A_associated_SNPs_58627 0 0 1 3 70507004 70507027 mRNA hsa-miR-196a CCAR1 miRanda miRanda
14034 chr10 70507015 70507015 1 + C T SKCM 70507018 + 70506998 70507038 41 GGAATGCACAGAGAATTCAAACACTACCAAATCAGGTACAG GGAATGCACAGAGAATTTAAACACTACCAAATCAGGTACAG < 41bp 1 0.495682715569493 1 0.649486303329468 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507018 chr10:70507015 stopgain 1.000 1 hm6A_associated_SNPs_58627 0 0 1 3 70507002 70507025 mRNA hsa-miR-142-3p CCAR1 miRanda miRanda
14034 chr10 70507015 70507015 1 + C T SKCM 70507018 + 70506998 70507038 41 GGAATGCACAGAGAATTCAAACACTACCAAATCAGGTACAG GGAATGCACAGAGAATTTAAACACTACCAAATCAGGTACAG < 41bp 1 0.495682715569493 1 0.649486303329468 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 18 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507018 chr10:70507015 stopgain 1.000 1 hm6A_associated_SNPs_58627 0 0 1 3 70507005 70507027 mRNA hsa-miR-196b CCAR1 miRanda miRanda
14034 chr17 80422298 80422298 1 + C T SKCM 80422302 + 80422282 80422322 41 CTTCCGCGTTCTGAACCTTAACAAGGTAAGGCATTCGGGGC CTTCCGCGTTCTGAACTTTAACAAGGTAAGGCATTCGGGGC < 41bp 1 0.5754033943629 1 0.840602815151215 experiment 0.8491932112742 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 NARF ENSG00000141562 CDS Human protein_coding chr17:80422302 chr17:80422298 nonsynonymous SNV 0.980 3 hm6A_associated_SNPs_58650 0 0 1 2 80422295 80422306 mRNA hsa-miR-23a NARF miRanda miRanda
14034 chr17 80422298 80422298 1 + C T SKCM 80422302 + 80422282 80422322 41 CTTCCGCGTTCTGAACCTTAACAAGGTAAGGCATTCGGGGC CTTCCGCGTTCTGAACTTTAACAAGGTAAGGCATTCGGGGC < 41bp 1 0.5754033943629 1 0.840602815151215 experiment 0.8491932112742 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 NARF ENSG00000141562 CDS Human protein_coding chr17:80422302 chr17:80422298 nonsynonymous SNV 0.980 3 hm6A_associated_SNPs_58650 0 0 1 2 80422295 80422306 mRNA hsa-miR-23b NARF miRanda miRanda
14034 chr2 155307003 155307003 1 + G A SKCM 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCCTACAATGCAAGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.689528108281317 1 0.997968196868896 experiment 0.620943783437367 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155307003 synonymous SNV . 0 hm6A_associated_SNPs_58674 0 0 0 3 155306982 155307003 mRNA hsa-miR-33a GALNT13 miRanda miRanda
14034 chr2 155307003 155307003 1 + G A SKCM 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCCTACAATGCAAGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.689528108281317 1 0.997968196868896 experiment 0.620943783437367 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155307003 synonymous SNV . 0 hm6A_associated_SNPs_58674 0 0 0 3 155306991 155307012 mRNA hsa-miR-139-5p GALNT13 miRanda miRanda
14034 chr2 155307003 155307003 1 + G A SKCM 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCCTACAATGCAAGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.689528108281317 1 0.997968196868896 experiment 0.620943783437367 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155307003 synonymous SNV . 0 hm6A_associated_SNPs_58674 0 0 0 3 155306983 155307003 mRNA hsa-miR-33b GALNT13 miRanda miRanda
14034 chrX 73046579 73046579 1 - C T SKCM 73046562 - 73046542 73046582 41 AGCGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAG AGCAAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAG < 41bp 1 0.385377582074427 1 0.943700671195984 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 4 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046562 chrX:73046579 . . 0 hm6A_associated_SNPs_58723 0 0 1 1 73046561 73046582 lncRNA hsa-miR-526b-5p XIST miRanda starBase2
14034 chrX 73046579 73046579 1 - C T SKCM 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGATAGAGGACCCAAGCAAAAAAGGTATCT < 41bp 1 0.308287129042261 1 0.895210027694702 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046579 . . 0 hm6A_associated_SNPs_58724 0 0 1 1 73046561 73046582 lncRNA hsa-miR-526b-5p XIST miRanda starBase2
14034 chr8 142204176 142204176 1 + G A SKCM 142204165 + 142204145 142204185 41 GCCGAGGGCTGGGGCAGGGAACACCCAAGGGGAAAATCTAC GCCGAGGGCTGGGGCAGGGAACACCCAAGGGAAAAATCTAC < 41bp 1 0.622176129752245 1 0.563589453697205 experiment 0.755647740495509 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 32 DENND3 ENSG00000105339 CDS Human protein_coding chr8:142204165 chr8:142204176 synonymous SNV . 0 hm6A_associated_SNPs_58734 0 0 0 1 142204175 142204195 mRNA hsa-miR-505 DENND3 miRanda miRanda
14034 chr11 65267924 65267924 1 + C T SKCM 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTTCA < 41bp 1 0.192946543142381 1 0.97958916425705 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267924 . . 0 hm6A_associated_SNPs_58745 0 0 1 2 65267916 65267939 lncRNA hsa-miR-141-3p MALAT1 miRanda starBase2
14034 chr11 65267924 65267924 1 + C T SKCM 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTTCA < 41bp 1 0.192946543142381 1 0.97958916425705 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267924 . . 0 hm6A_associated_SNPs_58745 0 0 1 2 65267915 65267939 lncRNA hsa-miR-200a-3p MALAT1 miRanda starBase2
14034 chr11 65267924 65267924 1 + C T SKCM 65267916 + 65267896 65267936 41 ATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTG ATCTAGGAAGACAGCAGCAGACAGGATTTCAGGAACCAGTG < 41bp 1 0.198398473550228 1 0.990398645401001 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267916 chr11:65267924 . . 0 hm6A_associated_SNPs_58746 0 0 1 2 65267916 65267939 lncRNA hsa-miR-141-3p MALAT1 miRanda starBase2
14034 chr11 65267924 65267924 1 + C T SKCM 65267916 + 65267896 65267936 41 ATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTG ATCTAGGAAGACAGCAGCAGACAGGATTTCAGGAACCAGTG < 41bp 1 0.198398473550228 1 0.990398645401001 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267916 chr11:65267924 . . 0 hm6A_associated_SNPs_58746 0 0 1 2 65267915 65267939 lncRNA hsa-miR-200a-3p MALAT1 miRanda starBase2
14034 chr11 65267924 65267924 1 + C T SKCM 65267930 + 65267910 65267950 41 CAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAG CAGCAGACAGGATTTCAGGAACCAGTGTTTGATGAAGCTAG < 41bp 1 0.0364153781722083 1 0.987711668014526 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267930 chr11:65267924 . . 0 hm6A_associated_SNPs_58747 0 0 1 2 65267916 65267939 lncRNA hsa-miR-141-3p MALAT1 miRanda starBase2
14034 chr11 65267924 65267924 1 + C T SKCM 65267930 + 65267910 65267950 41 CAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAG CAGCAGACAGGATTTCAGGAACCAGTGTTTGATGAAGCTAG < 41bp 1 0.0364153781722083 1 0.987711668014526 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267930 chr11:65267924 . . 0 hm6A_associated_SNPs_58747 0 0 1 2 65267915 65267939 lncRNA hsa-miR-200a-3p MALAT1 miRanda starBase2
14034 chr3 52525473 52525473 1 + C T SKCM 52525491 + 52525471 52525511 41 GCCCTCGCCGGAGCCTGTTGACAAGGACTTCTACTCCGAGT GCTCTCGCCGGAGCCTGTTGACAAGGACTTCTACTCCGAGT < 41bp 1 0.689847511624208 1 0.947996616363525 experiment 0.620304976751584 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 NISCH ENSG00000010322 CDS Human protein_coding chr3:52525491 chr3:52525473 nonsynonymous SNV 0.017 2 hm6A_associated_SNPs_58748 0 0 1 2 52525472 52525493 mRNA hsa-miR-505 NISCH miRanda miRanda
14034 chr3 52525473 52525473 1 + C T SKCM 52525491 + 52525471 52525511 41 GCCCTCGCCGGAGCCTGTTGACAAGGACTTCTACTCCGAGT GCTCTCGCCGGAGCCTGTTGACAAGGACTTCTACTCCGAGT < 41bp 1 0.689847511624208 1 0.947996616363525 experiment 0.620304976751584 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 NISCH ENSG00000010322 CDS Human protein_coding chr3:52525491 chr3:52525473 nonsynonymous SNV 0.017 2 hm6A_associated_SNPs_58748 0 0 1 2 52525470 52525492 mRNA hsa-miR-421 NISCH miRanda miRanda
14034 chr18 33751067 33751067 1 + G A SKCM 33751068 + 33751048 33751088 41 GCTTATATACCTGGAAAAAGACTGATCAAGTTCCAGAAATA GCTTATATACCTGGAAAAAAACTGATCAAGTTCCAGAAATA < 41bp 1 0.494911296499104 1 0.946972727775574 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 ELP2 ENSG00000134759 CDS Human protein_coding chr18:33751068 chr18:33751067 synonymous SNV . 0 hm6A_associated_SNPs_58784 0 0 1 2 33751061 33751084 mRNA hsa-miR-378 ELP2 miRanda miRanda
14034 chr18 33751067 33751067 1 + G A SKCM 33751068 + 33751048 33751088 41 GCTTATATACCTGGAAAAAGACTGATCAAGTTCCAGAAATA GCTTATATACCTGGAAAAAAACTGATCAAGTTCCAGAAATA < 41bp 1 0.494911296499104 1 0.946972727775574 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 ELP2 ENSG00000134759 CDS Human protein_coding chr18:33751068 chr18:33751067 synonymous SNV . 0 hm6A_associated_SNPs_58784 0 0 1 2 33751064 33751084 mRNA hsa-miR-422a ELP2 miRanda miRanda
14034 chr19 21299788 21299788 1 + G A SKCM 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAATGTTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.748842591815238 1 0.887491464614868 experiment 0.502314816369524 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299788 synonymous SNV . 0 hm6A_associated_SNPs_58794 0 0 0 4 21299771 21299793 mRNA hsa-miR-141 ZNF714 miRanda miRanda
14034 chr19 21299788 21299788 1 + G A SKCM 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAATGTTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.748842591815238 1 0.887491464614868 experiment 0.502314816369524 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299788 synonymous SNV . 0 hm6A_associated_SNPs_58794 0 0 0 4 21299771 21299793 mRNA hsa-miR-200a ZNF714 miRanda miRanda
14034 chr19 21299788 21299788 1 + G A SKCM 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAATGTTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.748842591815238 1 0.887491464614868 experiment 0.502314816369524 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299788 synonymous SNV . 0 hm6A_associated_SNPs_58794 0 0 0 4 21299788 21299809 mRNA hsa-miR-330-5p ZNF714 miRanda miRanda
14034 chr19 21299788 21299788 1 + G A SKCM 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAATGTTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.748842591815238 1 0.887491464614868 experiment 0.502314816369524 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299788 synonymous SNV . 0 hm6A_associated_SNPs_58794 0 0 0 4 21299775 21299797 mRNA hsa-miR-505 ZNF714 miRanda miRanda
14034 chr11 34478338 34478338 1 + G A SKCM 34478351 + 34478331 34478371 41 TGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC TGGCATTAAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC < 41bp 1 0.535933394979368 1 0.0518037676811218 experiment 0.928133210041263 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 CAT ENSG00000121691 CDS Human protein_coding chr11:34478351 chr11:34478338 nonsynonymous SNV 0.968 5 hm6A_associated_SNPs_58841 0 0 1 2 34478327 34478347 mRNA hsa-miR-193a-3p CAT miRanda miRanda
14034 chr11 34478338 34478338 1 + G A SKCM 34478351 + 34478331 34478371 41 TGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC TGGCATTAAGGCCAGTCCTGACAAAATGCTTCAGGTGAGCC < 41bp 1 0.535933394979368 1 0.0518037676811218 experiment 0.928133210041263 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 CAT ENSG00000121691 CDS Human protein_coding chr11:34478351 chr11:34478338 nonsynonymous SNV 0.968 5 hm6A_associated_SNPs_58841 0 0 1 2 34478327 34478347 mRNA hsa-miR-193b CAT miRanda miRanda
14034 chr8 48875536 48875536 1 + T C SKCM 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGCGAACTGTGAACACATCAAATCAT < 41bp 1 0.293272223349432 1 0.929561972618103 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875536 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58867 0 0 1 7 48875521 48875539 mRNA hsa-miR-23a MCM4 miRanda miRanda
14034 chr8 48875536 48875536 1 + T C SKCM 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGCGAACTGTGAACACATCAAATCAT < 41bp 1 0.293272223349432 1 0.929561972618103 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875536 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58867 0 0 1 7 48875526 48875546 mRNA hsa-miR-27a MCM4 miRanda miRanda
14034 chr8 48875536 48875536 1 + T C SKCM 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGCGAACTGTGAACACATCAAATCAT < 41bp 1 0.293272223349432 1 0.929561972618103 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875536 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58867 0 0 1 7 48875517 48875539 mRNA hsa-miR-23b MCM4 miRanda miRanda
14034 chr8 48875536 48875536 1 + T C SKCM 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGCGAACTGTGAACACATCAAATCAT < 41bp 1 0.293272223349432 1 0.929561972618103 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875536 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58867 0 0 1 7 48875526 48875546 mRNA hsa-miR-27b MCM4 miRanda miRanda
14034 chr8 48875536 48875536 1 + T C SKCM 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGCGAACTGTGAACACATCAAATCAT < 41bp 1 0.293272223349432 1 0.929561972618103 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875536 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58867 0 0 1 7 48875525 48875545 mRNA hsa-miR-128 MCM4 miRanda miRanda
14034 chr8 48875536 48875536 1 + T C SKCM 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGCGAACTGTGAACACATCAAATCAT < 41bp 1 0.293272223349432 1 0.929561972618103 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875536 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58867 0 0 1 7 48875533 48875553 mRNA hsa-miR-190 MCM4 miRanda miRanda
14034 chr8 48875536 48875536 1 + T C SKCM 48875539 + 48875519 48875559 41 TGAGCCATTTTTAAATGTGAACTGTGAACACATCAAATCAT TGAGCCATTTTTAAATGCGAACTGTGAACACATCAAATCAT < 41bp 1 0.293272223349432 1 0.929561972618103 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48875539 chr8:48875536 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_58867 0 0 1 7 48875521 48875544 mRNA hsa-miR-181d MCM4 miRanda miRanda
14034 chr17 41346992 41346992 1 + C T SKCM 41347012 + 41346992 41347032 41 CTTTGAGCTGTTGGATATAAACATTGTTCAAGAGTTGGAGA TTTTGAGCTGTTGGATATAAACATTGTTCAAGAGTTGGAGA < 41bp 1 0.687839569049301 1 0.0572281777858734 experiment 0.624320861901398 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 NBR1 ENSG00000188554 CDS Human protein_coding chr17:41347012 chr17:41346992 synonymous SNV . 0 hm6A_associated_SNPs_58883 0 0 1 1 41346987 41347006 mRNA hsa-miR-421 NBR1 miRanda miRanda
14034 chr16 48296762 48296762 1 + C T SKCM 48296769 + 48296749 48296789 41 TATGGTAGAACTTCCTTGGAACAAAAGTACAACTGGTAAGC TATGGTAGAACTTTCTTGGAACAAAAGTACAACTGGTAAGC < 41bp 1 0.556003814825875 1 0.0595230758190155 experiment 0.887992370348251 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 14 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48296769 chr16:48296762 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_58893 0 0 1 1 48296752 48296773 mRNA hsa-miR-375 LONP2 miRanda miRanda
14034 chr16 48296763 48296763 1 + C T SKCM 48296769 + 48296749 48296789 41 TATGGTAGAACTTCCTTGGAACAAAAGTACAACTGGTAAGC TATGGTAGAACTTCTTTGGAACAAAAGTACAACTGGTAAGC < 41bp 1 0.573081492414917 1 0.0999584496021271 experiment 0.853837015170166 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 15 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48296769 chr16:48296763 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_58903 0 0 1 1 48296752 48296773 mRNA hsa-miR-375 LONP2 miRanda miRanda
14034 chr6 88331196 88331196 1 + C T SKCM 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATTTT < 41bp 1 0.586524790557058 1 0.351157486438751 experiment 0.826950418885883 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331196 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_58906 0 0 1 6 88331176 88331197 mRNA hsa-let-7a ORC3L miRanda miRanda
14034 chr6 88331196 88331196 1 + C T SKCM 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATTTT < 41bp 1 0.586524790557058 1 0.351157486438751 experiment 0.826950418885883 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331196 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_58906 0 0 1 6 88331176 88331197 mRNA hsa-let-7b ORC3L miRanda miRanda
14034 chr6 88331196 88331196 1 + C T SKCM 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATTTT < 41bp 1 0.586524790557058 1 0.351157486438751 experiment 0.826950418885883 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331196 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_58906 0 0 1 6 88331176 88331197 mRNA hsa-let-7c ORC3L miRanda miRanda
14034 chr6 88331196 88331196 1 + C T SKCM 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATTTT < 41bp 1 0.586524790557058 1 0.351157486438751 experiment 0.826950418885883 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331196 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_58906 0 0 1 6 88331176 88331197 mRNA hsa-let-7d ORC3L miRanda miRanda
14034 chr6 88331196 88331196 1 + C T SKCM 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATTTT < 41bp 1 0.586524790557058 1 0.351157486438751 experiment 0.826950418885883 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331196 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_58906 0 0 1 6 88331176 88331197 mRNA hsa-let-7e ORC3L miRanda miRanda
14034 chr6 88331196 88331196 1 + C T SKCM 88331178 + 88331158 88331198 41 ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTT ATCAAATAATCAATGTGAAAACATCCGACGTCTACCATTTT < 41bp 1 0.586524790557058 1 0.351157486438751 experiment 0.826950418885883 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 39 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88331178 chr6:88331196 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_58906 0 0 1 6 88331176 88331197 mRNA hsa-miR-98 ORC3L miRanda miRanda
14034 chr14 95081358 95081358 1 + G A SKCM 95081340 + 95081320 95081360 41 ACGACTACGTGAAGAATGGAACTAGGGGGAAAATCACAGAT ACGACTACGTGAAGAATGGAACTAGGGGGAAAATCACAAAT < 41bp 1 0.43939134241074 1 0.998448610305786 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 39 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081340 chr14:95081358 nonsynonymous SNV 0.007 1 hm6A_associated_SNPs_58907 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr14 95081358 95081358 1 + G A SKCM 95081371 + 95081351 95081391 41 AATCACAGATCTGATCAAGGACCTTGACTCGCAGACAATGA AATCACAAATCTGATCAAGGACCTTGACTCGCAGACAATGA < 41bp 1 0.360650322682631 1 0.99813848733902 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 8 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081371 chr14:95081358 nonsynonymous SNV 0.007 1 hm6A_associated_SNPs_58908 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr14 95081358 95081358 1 + G A SKCM 95081377 + 95081357 95081397 41 AGATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC AAATCTGATCAAGGACCTTGACTCGCAGACAATGATGGTCC < 41bp 1 0.237035858692425 1 0.990711510181427 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 2 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081377 chr14:95081358 nonsynonymous SNV 0.007 1 hm6A_associated_SNPs_58909 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr19 47712451 47712451 1 + C T SKCM 47712432 + 47712412 47712452 41 CCAGGCCCTGTCTCAGCGGGACCCTCCTCACAACAACTTCT CCAGGCCCTGTCTCAGCGGGACCCTCCTCACAACAACTTTT < 41bp 1 0.616374217263736 1 0.292183190584183 experiment 0.767251565472527 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 40 SAE1 ENSG00000142230 CDS Human protein_coding chr19:47712432 chr19:47712451 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_58912 0 0 1 1 47712432 47712451 mRNA hsa-miR-382 SAE1 miRanda miRanda
14034 chr5 56545252 56545252 1 + C T SKCM 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TTCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT < 41bp 1 0.404907635049826 1 0.319104969501495 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545252 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_58916 0 0 1 2 56545248 56545269 mRNA hsa-miR-505 GPBP1 miRanda miRanda
14034 chr5 56545252 56545252 1 + C T SKCM 56545271 + 56545251 56545291 41 TCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT TTCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCT < 41bp 1 0.404907635049826 1 0.319104969501495 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545271 chr5:56545252 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_58916 0 0 1 2 56545241 56545268 mRNA hsa-miR-421 GPBP1 miRanda miRanda
14034 chr11 65273245 65273245 1 + T A SKCM 65273263 + 65273243 65273283 41 ATTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG ATAATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG < 41bp 1 0.473164209480385 1 0.671772062778473 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273263 chr11:65273245 . . 0 hm6A_associated_SNPs_59012 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374a-5p MALAT1 miRanda starBase2
14034 chr11 65273245 65273245 1 + T A SKCM 65273263 + 65273243 65273283 41 ATTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG ATAATAATACTTATCCAGTGACTAAAACCAACTTAAACCAG < 41bp 1 0.473164209480385 1 0.671772062778473 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273263 chr11:65273245 . . 0 hm6A_associated_SNPs_59012 0 0 1 2 65273229 65273249 lncRNA hsa-miR-374b-5p MALAT1 miRanda starBase2
14034 chr7 86794346 86794346 1 + T C SKCM 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCACTC < 41bp 1 0.613452632878034 1 0.918694078922272 experiment 0.773094734243933 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794346 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_59027 0 0 1 4 86794337 86794358 mRNA hsa-miR-34a DMTF1 miRanda miRanda
14034 chr7 86794346 86794346 1 + T C SKCM 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCACTC < 41bp 1 0.613452632878034 1 0.918694078922272 experiment 0.773094734243933 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794346 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_59027 0 0 1 4 86794337 86794358 mRNA hsa-miR-34c-5p DMTF1 miRanda miRanda
14034 chr7 86794346 86794346 1 + T C SKCM 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCACTC < 41bp 1 0.613452632878034 1 0.918694078922272 experiment 0.773094734243933 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794346 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_59027 0 0 1 4 86794337 86794358 mRNA hsa-miR-449a DMTF1 miRanda miRanda
14034 chr7 86794346 86794346 1 + T C SKCM 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCACTC < 41bp 1 0.613452632878034 1 0.918694078922272 experiment 0.773094734243933 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 39 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794346 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_59027 0 0 1 4 86794337 86794358 mRNA hsa-miR-449b DMTF1 miRanda miRanda
14034 chrX 73040680 73040680 1 - C T SKCM 73040660 - 73040640 73040680 41 GAAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATC AAAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATC < 41bp 1 0.270220870869992 1 0.929479956626892 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 1 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040660 chrX:73040680 . . 0 hm6A_associated_SNPs_59049 0 0 1 1 73040660 73040683 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chrX 73040680 73040680 1 - C T SKCM 73040668 - 73040648 73040688 41 GATAAATGGAAGACTCTTGAACTTGTGAACTGATGTGAAAT GATAAATGAAAGACTCTTGAACTTGTGAACTGATGTGAAAT < 41bp 1 0.367969283238169 1 0.939725697040558 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 9 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040668 chrX:73040680 . . 0 hm6A_associated_SNPs_59050 0 0 1 1 73040660 73040683 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chrX 73040680 73040680 1 - C T SKCM 73040676 - 73040656 73040696 41 AAAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGA AAAGCTAAGATAAATGAAAGACTCTTGAACTTGTGAACTGA < 41bp 1 0.461227849881243 1 0.904074013233185 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040676 chrX:73040680 . . 0 hm6A_associated_SNPs_59051 0 0 1 1 73040660 73040683 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chr20 60737980 60737980 1 + C T SKCM 60737960 + 60737940 60737980 41 TCGGCAACTACGTGTCTCGGACCAACATCAACATGCAGTCC TCGGCAACTACGTGTCTCGGACCAACATCAACATGCAGTCT < 41bp 1 0.145085835979572 1 0.650904417037964 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 SS18L1 ENSG00000184402 CDS Human protein_coding chr20:60737960 chr20:60737980 synonymous SNV . 0 hm6A_associated_SNPs_59095 0 0 0 1 60737979 60737987 mRNA hsa-miR-448 SS18L1 miRanda miRanda
14034 chr10 22607905 22607905 1 + C T SKCM 22607889 + 22607869 22607909 41 GTTTTTTTTCCTGCCCTAGAACACTGATTCCCCATCCTATC GTTTTTTTTCCTGCCCTAGAACACTGATTCCCCATCTTATC < 41bp 1 0.684979504189958 1 0.0669680833816528 experiment 0.630040991620084 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22607889 chr10:22607905 nonsynonymous SNV 0.973 0 hm6A_associated_SNPs_59232 0 0 1 3 22607894 22607915 mRNA hsa-miR-330-5p COMMD3 miRanda miRanda
14034 chr10 22607905 22607905 1 + C T SKCM 22607889 + 22607869 22607909 41 GTTTTTTTTCCTGCCCTAGAACACTGATTCCCCATCCTATC GTTTTTTTTCCTGCCCTAGAACACTGATTCCCCATCTTATC < 41bp 1 0.684979504189958 1 0.0669680833816528 experiment 0.630040991620084 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22607889 chr10:22607905 nonsynonymous SNV 0.973 0 hm6A_associated_SNPs_59232 0 0 1 3 22607896 22607915 mRNA hsa-miR-326 COMMD3 miRanda miRanda
14034 chr10 22607905 22607905 1 + C T SKCM 22607889 + 22607869 22607909 41 GTTTTTTTTCCTGCCCTAGAACACTGATTCCCCATCCTATC GTTTTTTTTCCTGCCCTAGAACACTGATTCCCCATCTTATC < 41bp 1 0.684979504189958 1 0.0669680833816528 experiment 0.630040991620084 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22607889 chr10:22607905 nonsynonymous SNV 0.973 0 hm6A_associated_SNPs_59232 0 0 1 3 22607897 22607918 mRNA hsa-miR-216b COMMD3 miRanda miRanda
14034 chr8 15519760 15519760 1 + C T SKCM 15519756 + 15519736 15519776 41 TTTGCTTTATTTGAGAAGGAACAACTTGGAGTTCATCTATA TTTGCTTTATTTGAGAAGGAACAATTTGGAGTTCATCTATA < 41bp 1 0.504278459419802 1 0.429748833179474 experiment 0.991443081160395 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519756 chr8:15519760 synonymous SNV . 0 hm6A_associated_SNPs_59246 0 0 1 2 15519739 15519760 mRNA hsa-miR-375 TUSC3 miRanda miRanda
14034 chr8 15519760 15519760 1 + C T SKCM 15519756 + 15519736 15519776 41 TTTGCTTTATTTGAGAAGGAACAACTTGGAGTTCATCTATA TTTGCTTTATTTGAGAAGGAACAATTTGGAGTTCATCTATA < 41bp 1 0.504278459419802 1 0.429748833179474 experiment 0.991443081160395 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519756 chr8:15519760 synonymous SNV . 0 hm6A_associated_SNPs_59246 0 0 1 2 15519742 15519763 mRNA hsa-miR-382 TUSC3 miRanda miRanda
14034 chr8 15519760 15519760 1 + C T SKCM 15519777 + 15519757 15519797 41 CAACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG CAATTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG < 41bp 1 0.436983513284035 1 0.108128517866135 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519777 chr8:15519760 synonymous SNV . 0 hm6A_associated_SNPs_59247 0 0 1 2 15519739 15519760 mRNA hsa-miR-375 TUSC3 miRanda miRanda
14034 chr8 15519760 15519760 1 + C T SKCM 15519777 + 15519757 15519797 41 CAACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG CAATTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG < 41bp 1 0.436983513284035 1 0.108128517866135 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 4 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519777 chr8:15519760 synonymous SNV . 0 hm6A_associated_SNPs_59247 0 0 1 2 15519742 15519763 mRNA hsa-miR-382 TUSC3 miRanda miRanda
14034 chr2 71653767 71653767 1 + C T SKCM 71653755 + 71653735 71653775 41 TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTCGTGGTGTT TAAAGAAGAAAAAGGGGAAAACTTCCACTCCTTGTGGTGTT < 41bp 1 0.695011332270037 1 0.988075971603394 experiment 0.609977335459926 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653755 chr2:71653767 nonsynonymous SNV 0.306 0 hm6A_associated_SNPs_59304 0 0 1 1 71653759 71653779 mRNA hsa-miR-371-5p ZNF638 miRanda miRanda
14034 chr2 71653767 71653767 1 + C T SKCM 71653784 + 71653764 71653804 41 CCTCGTGGTGTTGAGGGAGAACTATCTTTTGTGACATTGGA CCTTGTGGTGTTGAGGGAGAACTATCTTTTGTGACATTGGA < 41bp 1 0.75602617595897 1 0.994577586650848 experiment 0.487947648082059 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 4 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653784 chr2:71653767 nonsynonymous SNV 0.306 0 hm6A_associated_SNPs_59305 0 0 1 1 71653759 71653779 mRNA hsa-miR-371-5p ZNF638 miRanda miRanda
14034 chr1 155032808 155032808 1 + C T SKCM 155032802 + 155032782 155032822 41 CGACTCTGCCAGCTCAAGGGACCCACCTGCCAGTACAGGTA CGACTCTGCCAGCTCAAGGGACCCACTTGCCAGTACAGGTA < 41bp 1 0.162748068738238 1 0.868125438690186 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155032802 chr1:155032808 synonymous SNV . 0 hm6A_associated_SNPs_59329 0 0 1 1 155032786 155032813 mRNA hsa-miR-34a ADAM15 miRanda miRanda
14034 chr10 101503026 101503026 1 + C T SKCM 101503021 + 101503001 101503041 41 AATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTT AATTGAGGTGATGAAGGCTGACATTTGTCTTGCCAAGCTTT < 41bp 1 0.756475098497455 1 0.207643896341324 experiment 0.487049803005091 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 26 CUTC ENSG00000119929 CDS Human protein_coding chr10:101503021 chr10:101503026 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_59330 0 0 1 2 101503014 101503035 mRNA hsa-miR-31 CUTC miRanda miRanda
14034 chr10 101503026 101503026 1 + C T SKCM 101503021 + 101503001 101503041 41 AATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTT AATTGAGGTGATGAAGGCTGACATTTGTCTTGCCAAGCTTT < 41bp 1 0.756475098497455 1 0.207643896341324 experiment 0.487049803005091 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 26 CUTC ENSG00000119929 CDS Human protein_coding chr10:101503021 chr10:101503026 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_59330 0 0 1 2 101503015 101503037 mRNA hsa-miR-182 CUTC miRanda miRanda
14034 chr15 25227216 25227216 1 + C T SKCM 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AAAATTTGAGCTTAAAAATGACACTCTGAAATCTAGTCAGT < 41bp 1 0.235163495586319 1 0.177897602319717 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 PWARSN;SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227216 . . 0 hm6A_associated_SNPs_59382 0 0 1 2 25227198 25227217 mRNA hsa-miR-876-5p PAR-SN miRanda miRanda
14034 chr15 25227216 25227216 1 + C T SKCM 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AAAATTTGAGCTTAAAAATGACACTCTGAAATCTAGTCAGT < 41bp 1 0.235163495586319 1 0.177897602319717 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 PWARSN;SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227216 . . 0 hm6A_associated_SNPs_59382 0 0 1 2 25227198 25227217 mRNA hsa-miR-876-5p SNRPN miRanda miRanda
14034 chr9 127982863 127982863 1 + C T SKCM 127982847 + 127982827 127982867 41 CGTGGACCACGCCAGAAGTGACCAGCCCCCCACCATCCCCA CGTGGACCACGCCAGAAGTGACCAGCCCCCCACCATTCCCA < 41bp 1 0.565811802532981 1 0.78391420841217 experiment 0.868376394934038 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 37 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982847 chr9:127982863 nonsynonymous SNV 0.950 3 hm6A_associated_SNPs_59388 0 0 0 3 127982857 127982878 mRNA hsa-miR-1 RABEPK miRanda miRanda
14034 chr9 127982863 127982863 1 + C T SKCM 127982847 + 127982827 127982867 41 CGTGGACCACGCCAGAAGTGACCAGCCCCCCACCATCCCCA CGTGGACCACGCCAGAAGTGACCAGCCCCCCACCATTCCCA < 41bp 1 0.565811802532981 1 0.78391420841217 experiment 0.868376394934038 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 37 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982847 chr9:127982863 nonsynonymous SNV 0.950 3 hm6A_associated_SNPs_59388 0 0 0 3 127982857 127982878 mRNA hsa-miR-206 RABEPK miRanda miRanda
14034 chr9 127982863 127982863 1 + C T SKCM 127982847 + 127982827 127982867 41 CGTGGACCACGCCAGAAGTGACCAGCCCCCCACCATCCCCA CGTGGACCACGCCAGAAGTGACCAGCCCCCCACCATTCCCA < 41bp 1 0.565811802532981 1 0.78391420841217 experiment 0.868376394934038 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 37 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982847 chr9:127982863 nonsynonymous SNV 0.950 3 hm6A_associated_SNPs_59388 0 0 0 3 127982859 127982878 mRNA hsa-miR-613 RABEPK miRanda miRanda
14034 chr22 21288124 21288124 1 + T C SKCM 21288126 + 21288106 21288146 41 CCTGCCTACAGCAGAAGATAACCTGGAATATGTACGGACTC CCTGCCTACAGCAGAAGACAACCTGGAATATGTACGGACTC Direct Loss 1 0.687427005677973 1 0.968050479888916 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 19 CRKL ENSG00000099942 CDS Human protein_coding chr22:21288126 chr22:21288124 synonymous SNV . 0 hm6A_associated_SNPs_59425 0 0 1 1 21288108 21288130 mRNA hsa-miR-154 CRKL miRanda miRanda
14034 chr4 524284 524284 1 + C T SKCM 524290 + 524270 524310 41 TCTGTTCACGGGCACCAAAGACTTACTTAAATCTCAAGTCA TCTGTTCACGGGCATCAAAGACTTACTTAAATCTCAAGTCA < 41bp 1 0.698199227296156 1 0.911588132381439 experiment 0.603601545407688 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 PIGG ENSG00000174227 CDS Human protein_coding chr4:524290 chr4:524284 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_59429 0 0 1 1 524266 524290 mRNA hsa-miR-9 PIGG miRanda miRanda
14034 chr2 157425889 157425889 1 + A G SKCM 157425886 + 157425866 157425906 41 TCTTTATAGGTGGAAAGTGGACAACTTATCGGTCTATGGCA TCTTTATAGGTGGAAAGTGGACAGCTTATCGGTCTATGGCA < 41bp 1 0.243252420426207 1 0.83534574508667 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 GPD2 ENSG00000115159 CDS Human protein_coding chr2:157425886 chr2:157425889 nonsynonymous SNV 0.853 2 hm6A_associated_SNPs_59490 0 0 1 2 157425885 157425907 mRNA hsa-miR-153 GPD2 miRanda miRanda
14034 chr2 157425889 157425889 1 + A G SKCM 157425886 + 157425866 157425906 41 TCTTTATAGGTGGAAAGTGGACAACTTATCGGTCTATGGCA TCTTTATAGGTGGAAAGTGGACAGCTTATCGGTCTATGGCA < 41bp 1 0.243252420426207 1 0.83534574508667 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 GPD2 ENSG00000115159 CDS Human protein_coding chr2:157425886 chr2:157425889 nonsynonymous SNV 0.853 2 hm6A_associated_SNPs_59490 0 0 1 2 157425875 157425893 mRNA hsa-miR-382 GPD2 miRanda miRanda
14034 chr14 95081354 95081354 1 + C T SKCM 95081340 + 95081320 95081360 41 ACGACTACGTGAAGAATGGAACTAGGGGGAAAATCACAGAT ACGACTACGTGAAGAATGGAACTAGGGGGAAAATTACAGAT < 41bp 1 0.453743068315874 1 0.998367607593536 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 35 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081340 chr14:95081354 synonymous SNV . 0 hm6A_associated_SNPs_59506 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr14 95081354 95081354 1 + C T SKCM 95081371 + 95081351 95081391 41 AATCACAGATCTGATCAAGGACCTTGACTCGCAGACAATGA AATTACAGATCTGATCAAGGACCTTGACTCGCAGACAATGA < 41bp 1 0.337250679359127 1 0.998186707496643 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 4 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081371 chr14:95081354 synonymous SNV . 0 hm6A_associated_SNPs_59507 0 0 1 1 95081345 95081367 mRNA hsa-miR-383 SERPINA3 miRanda miRanda
14034 chr12 107237704 107237704 1 + C T SKCM 107237700 + 107237680 107237720 41 ATGTTCCCGAGCCCATCGAAACATCCGAAAATTTCTCAAAG ATGTTCCCGAGCCCATCGAAACATTCGAAAATTTCTCAAAG < 41bp 1 0.510792297842397 1 0.0253994166851044 experiment 0.978415404315206 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 RIC8B ENSG00000111785 CDS Human protein_coding chr12:107237700 chr12:107237704 synonymous SNV . 0 hm6A_associated_SNPs_59523 0 0 0 1 107237698 107237717 mRNA hsa-miR-539 RIC8B miRanda miRanda
14034 chr16 85954861 85954861 1 + C T SKCM 85954869 + 85954849 85954889 41 GAGATCATTTTTCAGAGAAAACCAACAGATCACCGTCTAAG GAGATCATTTTTTAGAGAAAACCAACAGATCACCGTCTAAG < 41bp 1 0.271314786394002 1 0.654492855072021 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 13 IRF8 ENSG00000140968 CDS Human protein_coding chr16:85954869 chr16:85954861 synonymous SNV . 0 hm6A_associated_SNPs_59527 0 0 0 1 85954856 85954877 mRNA hsa-miR-9 IRF8 miRanda miRanda
14034 chrX 41206955 41206955 1 + G T SKCM 41206941 + 41206921 41206961 41 TGGATATGGAGGAAATTATAACTCCCAGGGGGTTGACTGGT TGGATATGGAGGAAATTATAACTCCCAGGGGGTTTACTGGT < 41bp 1 0.658752412238217 1 0.768461108207703 experiment 0.682495175523565 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41206941 chrX:41206955 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_59541 0 0 1 1 41206950 41206976 mRNA hsa-miR-24 DDX3X miRanda miRanda
14034 chrX 41206955 41206955 1 + G T SKCM 41206956 + 41206936 41206976 41 TTATAACTCCCAGGGGGTTGACTGGTGGGGTAACTGAGCCT TTATAACTCCCAGGGGGTTTACTGGTGGGGTAACTGAGCCT Direct Loss 1 0.736549212438221 1 0.883312344551086 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41206956 chrX:41206955 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_59542 0 0 1 1 41206950 41206976 mRNA hsa-miR-24 DDX3X miRanda miRanda
14034 chr2 120125788 120125788 1 + G A SKCM 120125806 + 120125786 120125826 41 AGGAGGTTAGGCACCTTAAGACCAAGCCATCGGATGAGGAG AGAAGGTTAGGCACCTTAAGACCAAGCCATCGGATGAGGAG < 41bp 1 0.24504677202786 1 0.949525713920593 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 DBI ENSG00000155368 CDS Human protein_coding chr2:120125806 chr2:120125788 nonsynonymous SNV 0.981 2 hm6A_associated_SNPs_59619 0 0 1 2 120125776 120125803 mRNA hsa-miR-18a DBI miRanda miRanda
14034 chr2 120125788 120125788 1 + G A SKCM 120125806 + 120125786 120125826 41 AGGAGGTTAGGCACCTTAAGACCAAGCCATCGGATGAGGAG AGAAGGTTAGGCACCTTAAGACCAAGCCATCGGATGAGGAG < 41bp 1 0.24504677202786 1 0.949525713920593 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 3 DBI ENSG00000155368 CDS Human protein_coding chr2:120125806 chr2:120125788 nonsynonymous SNV 0.981 2 hm6A_associated_SNPs_59619 0 0 1 2 120125776 120125803 mRNA hsa-miR-18b DBI miRanda miRanda
14034 chr17 30521121 30521121 1 + C T SKCM 30521104 + 30521084 30521124 41 ATGATGATGACCTGGATTTGACACCTGAATATTTGTTCCCC ATGATGATGACCTGGATTTGACACCTGAATATTTGTTTCCC < 41bp 1 0.620135921694044 1 0.632478535175323 experiment 0.759728156611913 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 38 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521104 chr17:30521121 synonymous SNV . 0 hm6A_associated_SNPs_59639 0 0 1 2 30521107 30521126 mRNA hsa-miR-214 RHOT1 miRanda miRanda
14034 chr17 30521121 30521121 1 + C T SKCM 30521104 + 30521084 30521124 41 ATGATGATGACCTGGATTTGACACCTGAATATTTGTTCCCC ATGATGATGACCTGGATTTGACACCTGAATATTTGTTTCCC < 41bp 1 0.620135921694044 1 0.632478535175323 experiment 0.759728156611913 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 38 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521104 chr17:30521121 synonymous SNV . 0 hm6A_associated_SNPs_59639 0 0 1 2 30521120 30521126 mRNA hsa-miR-202 RHOT1 miRanda miRanda
14034 chr10 74644071 74644071 1 + C T SKCM 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTTCA < 41bp 1 0.648771725972654 1 0.0579608082771301 experiment 0.702456548054691 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644071 synonymous SNV . 0 hm6A_associated_SNPs_59702 0 0 1 2 74644069 74644089 mRNA hsa-miR-129-5p CCDC109A miRanda miRanda
14034 chr10 74644071 74644071 1 + C T SKCM 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTTCA < 41bp 1 0.648771725972654 1 0.0579608082771301 experiment 0.702456548054691 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644071 synonymous SNV . 0 hm6A_associated_SNPs_59702 0 0 1 2 74644064 74644086 mRNA hsa-miR-149 CCDC109A miRanda miRanda
14034 chr12 3702296 3702296 1 + T A SKCM 3702303 + 3702283 3702323 41 GTAGACTTGGATTTTAAGGGACAGCTGTGTGAAACATCTGT GTAGACTTGGATTATAAGGGACAGCTGTGTGAAACATCTGT < 41bp 1 0.71935737380911 1 0.985269963741302 experiment 0.561285252381781 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 14 PRMT8 ENSG00000111218 CDS Human protein_coding chr12:3702303 chr12:3702296 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_59704 0 0 0 1 3702294 3702315 mRNA hsa-miR-377 PRMT8 miRanda miRanda
14034 chr16 24231362 24231362 1 + C T SKCM 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTTATCATGAACTTGGA < 41bp 1 0.474768017073452 1 0.95730322599411 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231362 synonymous SNV . 0 hm6A_associated_SNPs_59731 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231362 24231362 1 + C T SKCM 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTTATCATGAACTTGGA < 41bp 1 0.474768017073452 1 0.95730322599411 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231362 synonymous SNV . 0 hm6A_associated_SNPs_59731 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr16 24231362 24231362 1 + C T SKCM 24231356 + 24231336 24231376 41 GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGA GAACTGACCCCCACTGATAAACTCTTTATCATGAACTTGGA < 41bp 1 0.474768017073452 1 0.95730322599411 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 27 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231356 chr16:24231362 synonymous SNV . 0 hm6A_associated_SNPs_59731 0 0 1 3 24231346 24231370 mRNA hsa-miR-433 PRKCB miRanda miRanda
14034 chr16 24231362 24231362 1 + C T SKCM 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTTATCATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.579146824703125 1 0.967727303504944 experiment 0.84170635059375 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231362 synonymous SNV . 0 hm6A_associated_SNPs_59732 0 0 1 3 24231359 24231381 mRNA hsa-miR-133a PRKCB miRanda miRanda
14034 chr16 24231362 24231362 1 + C T SKCM 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTTATCATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.579146824703125 1 0.967727303504944 experiment 0.84170635059375 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231362 synonymous SNV . 0 hm6A_associated_SNPs_59732 0 0 1 3 24231359 24231381 mRNA hsa-miR-133b PRKCB miRanda miRanda
14034 chr16 24231362 24231362 1 + C T SKCM 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTTATCATGAACTTGGACCAAAATGAATTTG < 41bp 1 0.579146824703125 1 0.967727303504944 experiment 0.84170635059375 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231362 synonymous SNV . 0 hm6A_associated_SNPs_59732 0 0 1 3 24231346 24231370 mRNA hsa-miR-433 PRKCB miRanda miRanda
14034 chr22 37425309 37425309 1 + C T SKCM 37425305 + 37425285 37425325 41 CGTGAACATCCCCTTCACAGACTTCCTGAGCCAGGAGGGGC CGTGAACATCCCCTTCACAGACTTTCTGAGCCAGGAGGGGC < 41bp 1 0.770355287862703 1 0.880140900611877 experiment 0.459289424274594 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 MPST ENSG00000128309 CDS Human protein_coding chr22:37425305 chr22:37425309 synonymous SNV . 0 hm6A_associated_SNPs_59740 0 0 1 2 37425296 37425317 mRNA hsa-miR-24 MPST miRanda miRanda
14034 chr22 37425309 37425309 1 + C T SKCM 37425305 + 37425285 37425325 41 CGTGAACATCCCCTTCACAGACTTCCTGAGCCAGGAGGGGC CGTGAACATCCCCTTCACAGACTTTCTGAGCCAGGAGGGGC < 41bp 1 0.770355287862703 1 0.880140900611877 experiment 0.459289424274594 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 MPST ENSG00000128309 CDS Human protein_coding chr22:37425305 chr22:37425309 synonymous SNV . 0 hm6A_associated_SNPs_59740 0 0 1 2 37425295 37425319 mRNA hsa-miR-149 MPST miRanda miRanda
14034 chr6 151355699 151355699 1 + C T SKCM 151355691 + 151355671 151355711 41 TATGGAGCCAAAGATATTGAACTCTCTCCTGAGGCACAAGC TATGGAGCCAAAGATATTGAACTCTCTCTTGAGGCACAAGC < 41bp 1 0.210904643467846 1 0.850015997886658 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 29 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151355691 chr6:151355699 nonsynonymous SNV 0.950 4 hm6A_associated_SNPs_59756 0 0 1 1 151355680 151355700 mRNA hsa-miR-185 MTHFD1L miRanda miRanda
14034 chr16 304446 304446 1 + C T SKCM 304429 + 304409 304449 41 CGTGATGTTGGACCACAAGGACTTAGAGGCCGAAATCCACC CGTGATGTTGGACCACAAGGACTTAGAGGCCGAAATCTACC < 41bp 1 0.370794283469061 1 0.993492841720581 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 38 FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:304429 chr16:304446 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_59757 0 0 1 1 304424 304447 mRNA hsa-miR-876-5p ITFG3 miRanda miRanda
14034 chr10 74644072 74644072 1 + C T SKCM 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCTA < 41bp 1 0.654548761017928 1 0.0627333223819733 experiment 0.690902477964144 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644072 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_59760 0 0 1 2 74644069 74644089 mRNA hsa-miR-129-5p CCDC109A miRanda miRanda
14034 chr10 74644072 74644072 1 + C T SKCM 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCTA < 41bp 1 0.654548761017928 1 0.0627333223819733 experiment 0.690902477964144 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644072 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_59760 0 0 1 2 74644064 74644086 mRNA hsa-miR-149 CCDC109A miRanda miRanda
14034 chr21 30699099 30699099 1 + T G SKCM 30699092 + 30699072 30699112 41 CCCCCACAATTCTTCCATAGACCCTCATGGACTTTATTCTT CCCCCACAATTCTTCCATAGACCCTCAGGGACTTTATTCTT < 41bp 1 0.545152067401049 1 0.976912140846252 experiment 0.909695865197901 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699092 chr21:30699099 nonsynonymous SNV 0.894 0 hm6A_associated_SNPs_59770 0 0 1 1 30699091 30699114 mRNA hsa-miR-186 BACH1 miRanda miRanda
14034 chrX 48755850 48755850 1 + C T SKCM 48755846 + 48755826 48755866 41 GCCAAGAGAGGCATCCTCAAACATCTGGAGCCTGGTGAGAC GCCAAGAGAGGCATCCTCAAACATTTGGAGCCTGGTGAGAC < 41bp 1 0.672707953847764 1 0.15466570854187 experiment 0.654584092304472 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48755846 chrX:48755850 synonymous SNV . 0 hm6A_associated_SNPs_59792 0 0 1 2 48755830 48755854 mRNA hsa-miR-199a-5p PQBP1 miRanda miRanda
14034 chrX 48755850 48755850 1 + C T SKCM 48755846 + 48755826 48755866 41 GCCAAGAGAGGCATCCTCAAACATCTGGAGCCTGGTGAGAC GCCAAGAGAGGCATCCTCAAACATTTGGAGCCTGGTGAGAC < 41bp 1 0.672707953847764 1 0.15466570854187 experiment 0.654584092304472 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48755846 chrX:48755850 synonymous SNV . 0 hm6A_associated_SNPs_59792 0 0 1 2 48755830 48755854 mRNA hsa-miR-199b-5p PQBP1 miRanda miRanda
14034 chr16 24231384 24231384 1 + G A SKCM 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAACTTGGACCAAAATAAATTTG < 41bp 1 0.553354328053137 1 0.964926719665527 experiment 0.893291343893727 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231384 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_59828 0 0 1 3 24231375 24231397 mRNA hsa-miR-16 PRKCB miRanda miRanda
14034 chr16 24231384 24231384 1 + G A SKCM 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAACTTGGACCAAAATAAATTTG < 41bp 1 0.553354328053137 1 0.964926719665527 experiment 0.893291343893727 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231384 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_59828 0 0 1 3 24231371 24231397 mRNA hsa-miR-15b PRKCB miRanda miRanda
14034 chr16 24231384 24231384 1 + G A SKCM 24231370 + 24231350 24231390 41 TGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTG TGATAAACTCTTCATCATGAACTTGGACCAAAATAAATTTG < 41bp 1 0.553354328053137 1 0.964926719665527 experiment 0.893291343893727 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 PRKCB ENSG00000166501 CDS Human protein_coding chr16:24231370 chr16:24231384 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_59828 0 0 1 3 24231375 24231397 mRNA hsa-miR-424 PRKCB miRanda miRanda
14034 chr14 51368622 51368622 1 + G A SKCM 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATA < 41bp 1 0.489280217991115 1 0.278222888708115 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368622 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_59832 0 0 0 3 51368606 51368627 mRNA hsa-miR-23a ABHD12B miRanda miRanda
14034 chr14 51368622 51368622 1 + G A SKCM 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATA < 41bp 1 0.489280217991115 1 0.278222888708115 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368622 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_59832 0 0 0 3 51368606 51368627 mRNA hsa-miR-23b ABHD12B miRanda miRanda
14034 chr14 51368622 51368622 1 + G A SKCM 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATA < 41bp 1 0.489280217991115 1 0.278222888708115 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368622 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_59832 0 0 0 3 51368613 51368629 mRNA hsa-miR-543 ABHD12B miRanda miRanda
14034 chr9 36198988 36198988 1 + C T SKCM 36198995 + 36198975 36199015 41 GGAAAGTAATGGTCCAACAGACAGTTATGCAGCTATTTCAC GGAAAGTAATGGTTCAACAGACAGTTATGCAGCTATTTCAC < 41bp 1 0.711926037222969 1 0.895618975162506 experiment 0.576147925554063 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 14 CLTA ENSG00000122705 CDS Human protein_coding chr9:36198995 chr9:36198988 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_59856 0 0 1 1 36198988 36199009 mRNA hsa-miR-22 CLTA miRanda miRanda
14034 chr5 110459595 110459595 1 + A T SKCM 110459601 + 110459581 110459621 41 CCCAGATATGCTGCACCTGAACAAAATAATGATCCCCAGCA CCCAGATATGCTGCTCCTGAACAAAATAATGATCCCCAGCA < 41bp 1 0.570948144034998 1 0.738560855388641 experiment 0.858103711930004 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 WDR36 ENSG00000134987 CDS Human protein_coding chr5:110459601 chr5:110459595 synonymous SNV . 0 hm6A_associated_SNPs_59857 0 0 1 2 110459568 110459595 mRNA hsa-miR-103 WDR36 miRanda miRanda
14034 chr5 110459595 110459595 1 + A T SKCM 110459601 + 110459581 110459621 41 CCCAGATATGCTGCACCTGAACAAAATAATGATCCCCAGCA CCCAGATATGCTGCTCCTGAACAAAATAATGATCCCCAGCA < 41bp 1 0.570948144034998 1 0.738560855388641 experiment 0.858103711930004 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 WDR36 ENSG00000134987 CDS Human protein_coding chr5:110459601 chr5:110459595 synonymous SNV . 0 hm6A_associated_SNPs_59857 0 0 1 2 110459568 110459595 mRNA hsa-miR-107 WDR36 miRanda miRanda
14034 chr5 162945257 162945257 1 + C T SKCM 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGCTCAGCTTGACTGCTTCAAATTGGAGACCT < 41bp 1 0.676548218259071 1 0.947245359420776 experiment 0.646903563481858 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945257 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_59926 0 0 1 1 162945235 162945257 mRNA hsa-miR-497 MAT2B miRanda miRanda
14034 chr5 162945257 162945257 1 + C T SKCM 162945268 + 162945248 162945288 41 TTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGA TTGACTGCTTCAAATTGGAGACCTTGGGCATTGGCCAACGA < 41bp 1 0.705937700917049 1 0.964444041252136 experiment 0.588124598165902 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 10 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945268 chr5:162945257 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_59927 0 0 1 1 162945235 162945257 mRNA hsa-miR-497 MAT2B miRanda miRanda
14034 chr1 82456635 82456635 1 + C T SKCM 82456627 + 82456607 82456647 41 CAGCCCTGACATGGAAGAAGACCTCTCTCCCTCCAGGAGGA CAGCCCTGACATGGAAGAAGACCTCTCTTCCTCCAGGAGGA < 41bp 1 0.287671531605851 1 0.997252345085144 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456627 chr1:82456635 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_59944 0 0 1 1 82456616 82456637 mRNA hsa-miR-185 LPHN2 miRanda miRanda
14034 chr8 124089365 124089365 1 + T C SKCM 124089362 + 124089342 124089382 41 CTTTGACAGAATTATAGTGAACATTATTCACAACACTTCCG CTTTGACAGAATTATAGTGAACACTATTCACAACACTTCCG < 41bp 1 0.434996075255636 1 0.41332158446312 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124089362 chr8:124089365 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_59977 0 0 1 2 124089360 124089382 mRNA hsa-miR-1 WDR67 miRanda miRanda
14034 chr8 124089365 124089365 1 + T C SKCM 124089362 + 124089342 124089382 41 CTTTGACAGAATTATAGTGAACATTATTCACAACACTTCCG CTTTGACAGAATTATAGTGAACACTATTCACAACACTTCCG < 41bp 1 0.434996075255636 1 0.41332158446312 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124089362 chr8:124089365 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_59977 0 0 1 2 124089360 124089382 mRNA hsa-miR-206 WDR67 miRanda miRanda
14034 chr2 71653716 71653716 1 + C T SKCM 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTTCTTTC < 41bp 1 0.714646691936089 1 0.995294332504272 experiment 0.570706616127823 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653716 nonsynonymous SNV 0.455 3 hm6A_associated_SNPs_59988 0 0 1 2 71653703 71653723 mRNA hsa-miR-488 ZNF638 miRanda miRanda
14034 chr2 71653716 71653716 1 + C T SKCM 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTTCTTTC < 41bp 1 0.714646691936089 1 0.995294332504272 experiment 0.570706616127823 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653716 nonsynonymous SNV 0.455 3 hm6A_associated_SNPs_59988 0 0 1 2 71653695 71653716 mRNA hsa-miR-543 ZNF638 miRanda miRanda
14034 chr6 4044126 4044126 1 + G A SKCM 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT GCCCCCAGAGCAGTACGAGAACACAATCACCATCTCCAGAT < 41bp 1 0.695802769375983 1 0.875001549720764 experiment 0.608394461248035 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044126 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_60009 0 0 1 1 4044105 4044127 mRNA hsa-miR-187 PRPF4B miRanda miRanda
14034 chr11 65272211 65272211 1 + A G SKCM 65272213 + 65272193 65272233 41 TGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTG TGGCAAGTGGAAATGTTTGAACAGTTCAGTGATCTTTAGTG < 41bp 1 0.214151771005894 1 0.927060544490814 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272213 chr11:65272211 . . 0 hm6A_associated_SNPs_60034 0 0 1 3 65272197 65272218 lncRNA hsa-miR-452-5p MALAT1 miRanda starBase2
14034 chr11 65272211 65272211 1 + A G SKCM 65272213 + 65272193 65272233 41 TGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTG TGGCAAGTGGAAATGTTTGAACAGTTCAGTGATCTTTAGTG < 41bp 1 0.214151771005894 1 0.927060544490814 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272213 chr11:65272211 . . 0 hm6A_associated_SNPs_60034 0 0 1 3 65272197 65272218 lncRNA hsa-miR-4676-3p MALAT1 miRanda starBase2
14034 chr11 65272211 65272211 1 + A G SKCM 65272213 + 65272193 65272233 41 TGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTG TGGCAAGTGGAAATGTTTGAACAGTTCAGTGATCTTTAGTG < 41bp 1 0.214151771005894 1 0.927060544490814 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272213 chr11:65272211 . . 0 hm6A_associated_SNPs_60034 0 0 1 3 65272194 65272218 lncRNA hsa-miR-892c-3p MALAT1 miRanda starBase2
14034 chr4 74274465 74274465 1 + C T SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACTAGAGGTTGATGTGATGTG < 41bp 1 0.124841184492369 1 0.863825559616089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 23 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274465 nonsynonymous SNV 0.060 3 hm6A_associated_SNPs_60075 0 0 1 4 74274465 74274489 mRNA hsa-miR-148a ALB miRanda miRanda
14034 chr4 74274465 74274465 1 + C T SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACTAGAGGTTGATGTGATGTG < 41bp 1 0.124841184492369 1 0.863825559616089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 23 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274465 nonsynonymous SNV 0.060 3 hm6A_associated_SNPs_60075 0 0 1 4 74274465 74274488 mRNA hsa-miR-301a ALB miRanda miRanda
14034 chr4 74274465 74274465 1 + C T SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACTAGAGGTTGATGTGATGTG < 41bp 1 0.124841184492369 1 0.863825559616089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 23 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274465 nonsynonymous SNV 0.060 3 hm6A_associated_SNPs_60075 0 0 1 4 74274465 74274489 mRNA hsa-miR-148b ALB miRanda miRanda
14034 chr4 74274465 74274465 1 + C T SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACTAGAGGTTGATGTGATGTG < 41bp 1 0.124841184492369 1 0.863825559616089 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 23 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274465 nonsynonymous SNV 0.060 3 hm6A_associated_SNPs_60075 0 0 1 4 74274465 74274488 mRNA hsa-miR-301b ALB miRanda miRanda
14034 chr5 40937666 40937666 1 + C T SKCM 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA ACTTACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.130517951852238 1 0.649769365787506 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937666 synonymous SNV . 0 hm6A_associated_SNPs_60078 0 0 0 2 40937657 40937677 mRNA hsa-miR-193a-3p C7 miRanda miRanda
14034 chr5 40937666 40937666 1 + C T SKCM 40937683 + 40937663 40937703 41 ACTCACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA ACTTACTGGCCAGTTTAGGAACAGAGTCATCAATACCAAAA < 41bp 1 0.130517951852238 1 0.649769365787506 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 C7 ENSG00000112936 CDS Human protein_coding chr5:40937683 chr5:40937666 synonymous SNV . 0 hm6A_associated_SNPs_60078 0 0 0 2 40937656 40937677 mRNA hsa-miR-193b C7 miRanda miRanda
14034 chr11 65266878 65266878 1 + T C SKCM 65266898 + 65266878 65266918 41 TTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTA CTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTA < 41bp 1 0.0300971396830276 1 0.186346799135208 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 1 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266898 chr11:65266878 . . 0 hm6A_associated_SNPs_60125 0 0 1 1 65266875 65266896 lncRNA hsa-miR-205-5p MALAT1 miRanda starBase2
14034 chr11 65267853 65267853 1 + A G SKCM 65267843 + 65267823 65267863 41 TTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTG TTATTTTTTAAATCCTGAGGACTAGCATTAGTTGACAGCTG < 41bp 1 0.149224256109409 1 0.942278861999512 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 31 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267843 chr11:65267853 . . 0 hm6A_associated_SNPs_60140 0 0 1 1 65267833 65267853 lncRNA hsa-miR-155-5p MALAT1 miRanda starBase2
14034 chr11 65267853 65267853 1 + A G SKCM 65267857 + 65267837 65267877 41 CTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA CTGAGGACTAGCATTAGTTGACAGCTGACCCAGGTGCTACA < 41bp 1 0.0873538573039658 1 0.885391294956207 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267857 chr11:65267853 . . 0 hm6A_associated_SNPs_60141 0 0 1 1 65267833 65267853 lncRNA hsa-miR-155-5p MALAT1 miRanda starBase2
14034 chr11 65267853 65267853 1 + A G SKCM 65267864 + 65267844 65267884 41 CTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGT CTAGCATTAGTTGACAGCTGACCCAGGTGCTACACAGAAGT < 41bp 1 0.0147352931776188 1 0.868363976478577 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267864 chr11:65267853 . . 0 hm6A_associated_SNPs_60142 0 0 1 1 65267833 65267853 lncRNA hsa-miR-155-5p MALAT1 miRanda starBase2
14034 chr11 120957707 120957707 1 + C T SKCM 120957696 + 120957676 120957716 41 CATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCC CATGCTTCTCTACTATTTTGACCATGAAGCATCCTTTGGCC < 41bp 1 0.729337439726925 1 0.919555246829987 experiment 0.54132512054615 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957696 chr11:120957707 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_60187 0 0 1 2 120957698 120957722 mRNA hsa-miR-330-5p TBCEL miRanda miRanda
14034 chr11 120957707 120957707 1 + C T SKCM 120957696 + 120957676 120957716 41 CATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCC CATGCTTCTCTACTATTTTGACCATGAAGCATCCTTTGGCC < 41bp 1 0.729337439726925 1 0.919555246829987 experiment 0.54132512054615 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957696 chr11:120957707 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_60187 0 0 1 2 120957703 120957722 mRNA hsa-miR-326 TBCEL miRanda miRanda
14034 chr17 76212833 76212833 1 + C T SKCM 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAATTGGACAGAGAAAGAGCCAA Direct Loss 1 0.181547085257847 1 0.0659366846084595 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212833 nonsynonymous SNV . 0 hm6A_associated_SNPs_60193 0 0 1 2 76212819 76212838 mRNA hsa-miR-145 BIRC5 miRanda miRanda
14034 chr17 76212833 76212833 1 + C T SKCM 76212832 + 76212812 76212852 41 ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAA ACCCTTGGTGAATTTTTGAAATTGGACAGAGAAAGAGCCAA Direct Loss 1 0.181547085257847 1 0.0659366846084595 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 22 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212832 chr17:76212833 nonsynonymous SNV . 0 hm6A_associated_SNPs_60193 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chr17 76212833 76212833 1 + C T SKCM 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAATTGGACAGAGAAAGAGCCAAGAACA < 41bp 1 0.642516613994262 1 0.286342591047287 experiment 0.714966772011477 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212833 nonsynonymous SNV . 0 hm6A_associated_SNPs_60194 0 0 1 2 76212819 76212838 mRNA hsa-miR-145 BIRC5 miRanda miRanda
14034 chr17 76212833 76212833 1 + C T SKCM 76212837 + 76212817 76212857 41 TGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACA TGGTGAATTTTTGAAATTGGACAGAGAAAGAGCCAAGAACA < 41bp 1 0.642516613994262 1 0.286342591047287 experiment 0.714966772011477 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212837 chr17:76212833 nonsynonymous SNV . 0 hm6A_associated_SNPs_60194 0 0 1 2 76212830 76212853 mRNA hsa-miR-149 BIRC5 miRanda miRanda
14034 chrX 73041825 73041825 1 - G A SKCM 73041830 - 73041810 73041850 41 TAAATAGATCTCTTTCAGAAACAATCCTCAGATAACGCATA TAAATAGATCTCTTTCAGAAACAATTCTCAGATAACGCATA < 41bp 1 0.353704570450928 1 0.0410971343517303 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 26 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041830 chrX:73041825 . . 0 hm6A_associated_SNPs_60201 0 0 1 1 73041817 73041838 lncRNA hsa-miR-3200-5p XIST miRanda starBase2
14034 chr14 66208870 66208870 1 + C T SKCM 66208884 + 66208864 66208904 41 AAACTTCCATTCTTTAGATGACATCTACTATTTTGGGGGCC AAACTTTCATTCTTTAGATGACATCTACTATTTTGGGGGCC < 41bp 1 0.7813160809245 1 0.261863708496094 experiment 0.437367838151 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 FUT8 ENSG00000033170 CDS Human protein_coding chr14:66208884 chr14:66208870 synonymous SNV . 0 hm6A_associated_SNPs_60214 0 0 1 1 66208858 66208879 mRNA hsa-miR-186 FUT8 miRanda miRanda
14034 chr2 33036214 33036214 1 + G A SKCM 33036208 + 33036188 33036228 41 GCAGAGTGACTTCAAGAGTGACAAATGATGGAGAAATCTGG GCAGAGTGACTTCAAGAGTGACAAATAATGGAGAAATCTGG < 41bp 1 0.621866779590432 1 0.860918402671814 experiment 0.756266440819136 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 TTC27 ENSG00000018699 CDS Human protein_coding chr2:33036208 chr2:33036214 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_60250 0 0 1 1 33036199 33036221 mRNA hsa-miR-136 TTC27 miRanda miRanda
14034 chr11 65271690 65271690 1 + G A SKCM 65271691 + 65271671 65271711 41 TGTTCTAGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAG TGTTCTAGTGAGTGTATGAAACCTTGCAGTGAGTTTATCAG < 41bp 1 0.499601249448983 1 0.0465861260890961 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271691 chr11:65271690 . . 0 hm6A_associated_SNPs_60310 0 0 1 2 65271669 65271690 lncRNA hsa-miR-485-3p MALAT1 miRanda starBase2
14034 chr11 65271690 65271690 1 + G A SKCM 65271691 + 65271671 65271711 41 TGTTCTAGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAG TGTTCTAGTGAGTGTATGAAACCTTGCAGTGAGTTTATCAG < 41bp 1 0.499601249448983 1 0.0465861260890961 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 20 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271691 chr11:65271690 . . 0 hm6A_associated_SNPs_60310 0 0 1 2 65271669 65271690 lncRNA hsa-miR-539-3p MALAT1 miRanda starBase2
14034 chr19 21300609 21300609 1 + C T SKCM 21300616 + 21300596 21300636 41 GCCTTTAACCACTCCTCAAAACTTACTATACATAAGATAAT GCCTTTAACCACTTCTCAAAACTTACTATACATAAGATAAT < 41bp 1 0.752568174665819 1 0.99822473526001 experiment 0.494863650668363 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300616 chr19:21300609 nonsynonymous SNV 0.001 1 hm6A_associated_SNPs_60321 0 0 1 1 21300588 21300609 mRNA hsa-miR-140-5p ZNF714 miRanda miRanda
14034 chr17 26519196 26519196 1 + C T SKCM 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTTTCTGCATCA < 41bp 1 0.393642109727198 1 0.00132232904434204 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519196 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_60324 0 0 1 2 26519187 26519211 mRNA hsa-miR-296-3p NLK miRanda miRanda
14034 chr17 26519196 26519196 1 + C T SKCM 26519185 + 26519165 26519205 41 TTTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCA TTTGGAACAGCAGAAAGGAAACAGAGTGCCTTTCTGCATCA < 41bp 1 0.393642109727198 1 0.00132232904434204 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 NLK ENSG00000087095 CDS Human protein_coding chr17:26519185 chr17:26519196 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_60324 0 0 1 2 26519181 26519205 mRNA hsa-miR-383 NLK miRanda miRanda
14034 chr12 53853069 53853069 1 + C A SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTATATGACCAATAGCACAGCTGCCAGT < 41bp 1 0.24654116595942 1 0.0890887975692749 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853069 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_60351 0 0 1 3 53853059 53853082 mRNA hsa-miR-9 PCBP2 miRanda miRanda
14034 chr12 53853069 53853069 1 + C A SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTATATGACCAATAGCACAGCTGCCAGT < 41bp 1 0.24654116595942 1 0.0890887975692749 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853069 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_60351 0 0 1 3 53853056 53853075 mRNA hsa-miR-376a PCBP2 miRanda miRanda
14034 chr12 53853069 53853069 1 + C A SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTATATGACCAATAGCACAGCTGCCAGT < 41bp 1 0.24654116595942 1 0.0890887975692749 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853069 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_60351 0 0 1 3 53853056 53853075 mRNA hsa-miR-376b PCBP2 miRanda miRanda
14034 chr11 70171109 70171109 1 + G T SKCM 70171093 + 70171073 70171113 41 GCACTGAAGTCCTTATTTGAACACCACAAAGCTCTGGATGA GCACTGAAGTCCTTATTTGAACACCACAAAGCTCTGTATGA < 41bp 1 0.567176382480517 1 0.486072301864624 experiment 0.865647235038967 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70171093 chr11:70171109 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_60360 0 0 1 2 70171101 70171117 mRNA hsa-miR-204 PPFIA1 miRanda miRanda
14034 chr11 70171109 70171109 1 + G T SKCM 70171093 + 70171073 70171113 41 GCACTGAAGTCCTTATTTGAACACCACAAAGCTCTGGATGA GCACTGAAGTCCTTATTTGAACACCACAAAGCTCTGTATGA < 41bp 1 0.567176382480517 1 0.486072301864624 experiment 0.865647235038967 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70171093 chr11:70171109 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_60360 0 0 1 2 70171101 70171117 mRNA hsa-miR-211 PPFIA1 miRanda miRanda
14034 chr19 9452399 9452399 1 + T A SKCM 9452408 + 9452388 9452428 41 AGAGGAACTGTTTGACTTTAACCAATGTGAAAAAGCCTTGA AGAGGAACTGTATGACTTTAACCAATGTGAAAAAGCCTTGA < 41bp 1 0.544251641015862 1 0.960408806800842 experiment 0.911496717968276 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452408 chr19:9452399 nonsynonymous SNV 0.965 0 hm6A_associated_SNPs_60401 0 0 1 2 9452398 9452418 mRNA hsa-miR-23a ZNF559 miRanda miRanda
14034 chr19 9452399 9452399 1 + T A SKCM 9452408 + 9452388 9452428 41 AGAGGAACTGTTTGACTTTAACCAATGTGAAAAAGCCTTGA AGAGGAACTGTATGACTTTAACCAATGTGAAAAAGCCTTGA < 41bp 1 0.544251641015862 1 0.960408806800842 experiment 0.911496717968276 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 12 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452408 chr19:9452399 nonsynonymous SNV 0.965 0 hm6A_associated_SNPs_60401 0 0 1 2 9452398 9452418 mRNA hsa-miR-23b ZNF559 miRanda miRanda
14034 chr11 837513 837513 1 + C T SKCM 837500 + 837480 837520 41 CAACTCACAGGACTGGCGAGACAGTGAGTGGATCCGCTCAC CAACTCACAGGACTGGCGAGACAGTGAGTGGATTCGCTCAC < 41bp 1 0.47473365782212 1 0.978464186191559 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 CD151 ENSG00000177697 CDS Human protein_coding chr11:837500 chr11:837513 synonymous SNV . 0 hm6A_associated_SNPs_60423 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chr10 101515430 101515430 1 + C T SKCM 101515449 + 101515429 101515469 41 CCCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT CTCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT < 41bp 1 0.738064967187022 1 0.960414290428162 experiment 0.523870065625955 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 CUTC ENSG00000119929 CDS Human protein_coding chr10:101515449 chr10:101515430 synonymous SNV . 0 hm6A_associated_SNPs_60447 0 0 1 2 101515430 101515450 mRNA hsa-miR-23a CUTC miRanda miRanda
14034 chr10 101515430 101515430 1 + C T SKCM 101515449 + 101515429 101515469 41 CCCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT CTCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT < 41bp 1 0.738064967187022 1 0.960414290428162 experiment 0.523870065625955 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 2 CUTC ENSG00000119929 CDS Human protein_coding chr10:101515449 chr10:101515430 synonymous SNV . 0 hm6A_associated_SNPs_60447 0 0 1 2 101515423 101515450 mRNA hsa-miR-23b CUTC miRanda miRanda
14034 chr2 155306988 155306988 1 + G A SKCM 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATAGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.762466457044866 1 0.997542262077332 experiment 0.475067085910268 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306988 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_60453 0 0 0 2 155306982 155307003 mRNA hsa-miR-33a GALNT13 miRanda miRanda
14034 chr2 155306988 155306988 1 + G A SKCM 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATAGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.762466457044866 1 0.997542262077332 experiment 0.475067085910268 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 4 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306988 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_60453 0 0 0 2 155306983 155307003 mRNA hsa-miR-33b GALNT13 miRanda miRanda
14034 chr2 149227820 149227820 1 + C T SKCM 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CGTGCACTGCCACAATGCAAACACTAACTTTGTTTACAGTA < 41bp 1 0.688941814677535 1 0.870105028152466 experiment 0.62211637064493 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227820 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_60463 0 0 0 2 149227816 149227836 mRNA hsa-miR-378 MBD5 miRanda miRanda
14034 chr2 149227820 149227820 1 + C T SKCM 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CGTGCACTGCCACAATGCAAACACTAACTTTGTTTACAGTA < 41bp 1 0.688941814677535 1 0.870105028152466 experiment 0.62211637064493 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227820 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_60463 0 0 0 2 149227813 149227836 mRNA hsa-miR-422a MBD5 miRanda miRanda
14034 chr7 142991338 142991338 1 + C T SKCM 142991344 + 142991324 142991364 41 TACTGTGGAACACTCCCTAGACAATAAAGATGGTCCTGTCT TACTGTGGAACACTTCCTAGACAATAAAGATGGTCCTGTCT < 41bp 1 0.676402145381865 1 0.0809560418128967 experiment 0.64719570923627 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 15 CASP2 ENSG00000106144 CDS Human protein_coding chr7:142991344 chr7:142991338 nonsynonymous SNV 0.965 3 hm6A_associated_SNPs_60487 0 0 1 1 142991323 142991340 mRNA hsa-miR-122 CASP2 miRanda miRanda
14034 chr1 10205044 10205044 1 + C T SKCM 10205058 + 10205038 10205078 41 GATTCCCCACTGGCAACTAGACACCGCGAAATGCTGAAGCG GATTCCTCACTGGCAACTAGACACCGCGAAATGCTGAAGCG < 41bp 1 0.725628670893587 1 0.119785368442535 experiment 0.548742658212825 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 UBE4B ENSG00000130939 CDS Human protein_coding chr1:10205058 chr1:10205044 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_60502 0 0 1 1 10205027 10205048 mRNA hsa-miR-491-5p UBE4B miRanda miRanda
14034 chr11 65271563 65271563 1 + G T SKCM 65271546 + 65271526 65271566 41 GGCAATGTTTTACACTATTGACCTTATATAGGGAAGGGAGG GGCAATGTTTTACACTATTGACCTTATATAGGGAAGGTAGG < 41bp 1 0.0195475083188714 1 0.00608104467391968 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271546 chr11:65271563 . . 0 hm6A_associated_SNPs_60508 0 0 1 1 65271548 65271571 lncRNA hsa-miR-4640-3p MALAT1 miRanda starBase2
14034 chr17 27185480 27185480 1 + C T SKCM 27185500 + 27185480 27185520 41 CCCTAGTGTCCTGGTCATGAACAAGGTGAGCACTACCCACC TCCTAGTGTCCTGGTCATGAACAAGGTGAGCACTACCCACC < 41bp 1 0.657872137865021 1 0.650657534599304 experiment 0.684255724269958 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 1 ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27185500 chr17:27185480 synonymous SNV . 0 hm6A_associated_SNPs_60510 0 0 1 1 27185473 27185493 mRNA hsa-miR-873 ERAL1 miRanda miRanda
14034 chr2 217526682 217526682 1 + C T SKCM 217526693 + 217526673 217526713 41 CCTGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC CCTGCACATTCCCAACTGTGACAAGCATGGCCTGTACAACC < 41bp 1 0.70930280248031 1 0.29017436504364 experiment 0.58139439503938 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217526693 chr2:217526682 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_60516 0 0 1 2 217526673 217526694 mRNA hsa-miR-27a IGFBP2 miRanda miRanda
14034 chr2 217526682 217526682 1 + C T SKCM 217526693 + 217526673 217526713 41 CCTGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC CCTGCACATTCCCAACTGTGACAAGCATGGCCTGTACAACC < 41bp 1 0.70930280248031 1 0.29017436504364 experiment 0.58139439503938 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217526693 chr2:217526682 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_60516 0 0 1 2 217526673 217526694 mRNA hsa-miR-27b IGFBP2 miRanda miRanda
14034 chr14 105175702 105175702 1 + C T SKCM 105175687 + 105175667 105175707 41 TTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTCCTTCC TTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTTCTTCC < 41bp 1 0.591598981998317 1 0.804782152175903 experiment 0.816802036003367 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 36 INF2 ENSG00000203485 CDS Human protein_coding chr14:105175687 chr14:105175702 synonymous SNV . 0 hm6A_associated_SNPs_60534 0 0 1 2 105175682 105175705 mRNA hsa-miR-28-5p INF2 miRanda miRanda
14034 chr14 105175702 105175702 1 + C T SKCM 105175687 + 105175667 105175707 41 TTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTCCTTCC TTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTTCTTCC < 41bp 1 0.591598981998317 1 0.804782152175903 experiment 0.816802036003367 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 36 INF2 ENSG00000203485 CDS Human protein_coding chr14:105175687 chr14:105175702 synonymous SNV . 0 hm6A_associated_SNPs_60534 0 0 1 2 105175683 105175705 mRNA hsa-miR-708 INF2 miRanda miRanda
14034 chr15 25328765 25328765 1 + C T SKCM 25328778 + 25328758 25328798 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCTTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0839914335860968 1 0.441063523292542 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 SNORD116-17;SNORD116-19 ENSG00000206656 ncRNA_exonic Human snoRNA chr15:25328778 chr15:25328765 . . 0 hm6A_associated_SNPs_60573 0 0 0 3 25328745 25328766 mRNA hsa-miR-1 SNORD116-17 miRanda miRanda
14034 chr15 25328765 25328765 1 + C T SKCM 25328778 + 25328758 25328798 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCTTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0839914335860968 1 0.441063523292542 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 SNORD116-17;SNORD116-19 ENSG00000206656 ncRNA_exonic Human snoRNA chr15:25328778 chr15:25328765 . . 0 hm6A_associated_SNPs_60573 0 0 0 3 25328741 25328766 mRNA hsa-miR-206 SNORD116-17 miRanda miRanda
14034 chr15 25328765 25328765 1 + C T SKCM 25328778 + 25328758 25328798 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCTTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.0839914335860968 1 0.441063523292542 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 SNORD116-17;SNORD116-19 ENSG00000206656 ncRNA_exonic Human snoRNA chr15:25328778 chr15:25328765 . . 0 hm6A_associated_SNPs_60573 0 0 0 3 25328747 25328766 mRNA hsa-miR-613 SNORD116-17 miRanda miRanda
14034 chr1 82456275 82456275 1 + A G SKCM 82456281 + 82456261 82456301 41 ACTTACGGGGCAGCAGCAAGACTCACAACCTCGAGCTCACG ACTTACGGGGCAGCGGCAAGACTCACAACCTCGAGCTCACG < 41bp 1 0.697209247949572 1 0.998101830482483 experiment 0.605581504100857 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456281 chr1:82456275 nonsynonymous SNV 0.943 0 hm6A_associated_SNPs_60628 0 0 1 1 82456264 82456283 mRNA hsa-miR-431 LPHN2 miRanda miRanda
14034 chr7 100162603 100162603 1 + C T SKCM 100162587 + 100162567 100162607 41 TCAAGCCCATTCGCCTCCAAACCTCCAACCACCAACCCCTT TCAAGCCCATTCGCCTCCAAACCTCCAACCACCAACTCCTT < 41bp 1 0.277761976487387 1 0.0534625947475433 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 37 AGFG2 ENSG00000106351 CDS Human protein_coding chr7:100162587 chr7:100162603 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_60656 0 0 1 1 100162601 100162622 mRNA hsa-miR-128 AGFG2 miRanda miRanda
14034 chr13 103514777 103514777 1 + G A SKCM 103514764 + 103514744 103514784 41 AGCAGAAGAAATGCGTATAAACAGCTCCACCGAGAACAGTG AGCAGAAGAAATGCGTATAAACAGCTCCACCGAAAACAGTG < 41bp 1 0.781662034189494 1 0.999253273010254 experiment 0.436675931621012 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514764 chr13:103514777 synonymous SNV . 0 hm6A_associated_SNPs_60670 0 0 0 1 103514773 103514792 mRNA hsa-miR-205 ERCC5 miRanda miRanda
14034 chr17 42225865 42225865 1 + C T SKCM 42225883 + 42225863 42225903 41 ATCCTGTCATCCAATGTAGGACTCCACGACCCCCCTTGAGA ATTCTGTCATCCAATGTAGGACTCCACGACCCCCCTTGAGA < 41bp 1 0.785189577421653 1 0.96260404586792 experiment 0.429620845156693 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225883 chr17:42225865 nonsynonymous SNV 0.001 2 hm6A_associated_SNPs_60689 0 0 1 1 42225844 42225866 mRNA hsa-miR-383 C17orf53 miRanda miRanda
14034 chr1 14057584 14057584 1 + C T SKCM 14057598 + 14057578 14057618 41 GCTTTTCCCTTCTGCTGTTGACAAGACCCGGATTGGTGAGT GCTTTTTCCTTCTGCTGTTGACAAGACCCGGATTGGTGAGT < 41bp 1 0.339893703448371 1 0.101999342441559 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14057598 chr1:14057584 synonymous SNV . 0 hm6A_associated_SNPs_60742 0 0 1 2 14057579 14057600 mRNA hsa-miR-505 PRDM2 miRanda miRanda
14034 chr1 14057584 14057584 1 + C T SKCM 14057598 + 14057578 14057618 41 GCTTTTCCCTTCTGCTGTTGACAAGACCCGGATTGGTGAGT GCTTTTTCCTTCTGCTGTTGACAAGACCCGGATTGGTGAGT < 41bp 1 0.339893703448371 1 0.101999342441559 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14057598 chr1:14057584 synonymous SNV . 0 hm6A_associated_SNPs_60742 0 0 1 2 14057578 14057599 mRNA hsa-miR-421 PRDM2 miRanda miRanda
14034 chr1 230398715 230398715 1 + T G SKCM 230398698 + 230398678 230398718 41 AGATTGGAGCTTAGGAAGAAACTCAGCTGCAAGCCTTTCAA AGATTGGAGCTTAGGAAGAAACTCAGCTGCAAGCCTTGCAA < 41bp 1 0.229489752850883 1 0.0230750739574432 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230398698 chr1:230398715 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_60756 0 0 1 1 230398698 230398718 mRNA hsa-miR-488 GALNT2 miRanda miRanda
14034 chrX 114877744 114877744 1 + C T SKCM 114877729 + 114877709 114877749 41 GTTGTCAGTGGAAACCCCAAACTCAACTTAGCTTTCGTGGC GTTGTCAGTGGAAACCCCAAACTCAACTTAGCTTTTGTGGC < 41bp 1 0.0981170760320544 1 0.227749973535538 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 36 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114877729 chrX:114877744 synonymous SNV . 0 hm6A_associated_SNPs_60787 0 0 1 1 114877735 114877756 mRNA hsa-miR-154 PLS3 miRanda miRanda
14034 chr5 127471439 127471439 1 + C T SKCM 127471449 + 127471429 127471469 41 TTGGTGATTTCGTCATAGGAACATTTATCCCACTGGAGAGC TTGGTGATTTTGTCATAGGAACATTTATCCCACTGGAGAGC < 41bp 1 0.76527088325299 1 0.511963665485382 experiment 0.469458233494019 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 11 SLC12A2 ENSG00000064651 CDS Human protein_coding chr5:127471449 chr5:127471439 synonymous SNV . 0 hm6A_associated_SNPs_60788 0 0 1 1 127471421 127471443 mRNA hsa-miR-539 SLC12A2 miRanda miRanda
14034 chr17 43176825 43176825 1 + C T SKCM 43176843 + 43176823 43176863 41 CCCACCTGAGCAGAAATATGACCATGCAGCGCACCATGAAG CCTACCTGAGCAGAAATATGACCATGCAGCGCACCATGAAG < 41bp 1 0.232904521424501 1 0.873366594314575 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 NMT1 ENSG00000136448 CDS Human protein_coding chr17:43176843 chr17:43176825 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_60819 0 0 1 1 43176803 43176828 mRNA hsa-miR-491-5p NMT1 miRanda miRanda
14034 chr1 82456266 82456266 1 + C G SKCM 82456281 + 82456261 82456301 41 ACTTACGGGGCAGCAGCAAGACTCACAACCTCGAGCTCACG ACTTAGGGGGCAGCAGCAAGACTCACAACCTCGAGCTCACG < 41bp 1 0.704610749092295 1 0.997045636177063 experiment 0.59077850181541 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 6 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456281 chr1:82456266 nonsynonymous SNV 0.970 3 hm6A_associated_SNPs_60866 0 0 1 1 82456264 82456283 mRNA hsa-miR-431 LPHN2 miRanda miRanda
14034 chr8 32621437 32621437 1 + C T SKCM 32621425 + 32621405 32621445 41 CCCTTCATGGAAGAAGAGAGACCTCTACTTCTCGTGACACC CCCTTCATGGAAGAAGAGAGACCTCTACTTCTTGTGACACC < 41bp 1 0.548767343743995 1 0.956281304359436 experiment 0.90246531251201 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 NRG1 ENSG00000157168 CDS Human protein_coding chr8:32621425 chr8:32621437 synonymous SNV . 0 hm6A_associated_SNPs_60874 0 0 0 1 32621437 32621459 mRNA hsa-miR-615-3p NRG1 miRanda miRanda
14034 chr3 130735079 130735079 1 + G A SKCM 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAAGATGTAAGCTGTGTC < 41bp 1 0.708796913771136 1 0.817771196365356 experiment 0.582406172457728 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 32 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735079 nonsynonymous SNV 0.967 4 hm6A_associated_SNPs_60916 0 0 0 3 130735060 130735083 mRNA hsa-miR-221 ATP2C1 miRanda miRanda
14034 chr3 130735079 130735079 1 + G A SKCM 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAAGATGTAAGCTGTGTC < 41bp 1 0.708796913771136 1 0.817771196365356 experiment 0.582406172457728 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 32 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735079 nonsynonymous SNV 0.967 4 hm6A_associated_SNPs_60916 0 0 0 3 130735078 130735098 mRNA hsa-miR-378 ATP2C1 miRanda miRanda
14034 chr3 130735079 130735079 1 + G A SKCM 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAAGATGTAAGCTGTGTC < 41bp 1 0.708796913771136 1 0.817771196365356 experiment 0.582406172457728 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 32 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735079 nonsynonymous SNV 0.967 4 hm6A_associated_SNPs_60916 0 0 0 3 130735077 130735098 mRNA hsa-miR-422a ATP2C1 miRanda miRanda
14034 chr17 73700872 73700872 1 + A G SKCM 73700860 + 73700840 73700880 41 GGCCCAGAAAATTGAGATGGACAAATTGGAAAAGGCCAAAA GGCCCAGAAAATTGAGATGGACAAATTGGAAAGGGCCAAAA < 41bp 1 0.719274964108194 1 0.905242443084717 experiment 0.561450071783612 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73700860 chr17:73700872 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_60919 0 0 1 1 73700872 73700893 mRNA hsa-miR-375 SAP30BP miRanda miRanda
14034 chr12 57906612 57906612 1 + G A SKCM 57906606 + 57906586 57906626 41 GTTTGGGGACATGGCCCAGGACACGGGGATCCCTGCTGACA GTTTGGGGACATGGCCCAGGACACGGAGATCCCTGCTGACA < 41bp 1 0.794175826291144 1 0.0767830312252045 experiment 0.411648347417712 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 MARS ENSG00000166986 CDS Human protein_coding chr12:57906606 chr12:57906612 nonsynonymous SNV 0.980 2 hm6A_associated_SNPs_60929 0 0 1 1 57906603 57906624 mRNA hsa-miR-214 MARS miRanda miRanda
14034 chr12 57906612 57906612 1 + G A SKCM 57906624 + 57906604 57906644 41 GGACACGGGGATCCCTGCTGACATCTGGCGCTTCTATCTGC GGACACGGAGATCCCTGCTGACATCTGGCGCTTCTATCTGC < 41bp 1 0.774048544579458 1 0.13365763425827 experiment 0.451902910841085 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 9 MARS ENSG00000166986 CDS Human protein_coding chr12:57906624 chr12:57906612 nonsynonymous SNV 0.980 2 hm6A_associated_SNPs_60930 0 0 1 1 57906603 57906624 mRNA hsa-miR-214 MARS miRanda miRanda
14034 chr12 57906613 57906613 1 + G A SKCM 57906606 + 57906586 57906626 41 GTTTGGGGACATGGCCCAGGACACGGGGATCCCTGCTGACA GTTTGGGGACATGGCCCAGGACACGGGAATCCCTGCTGACA < 41bp 1 0.794160035282709 1 0.07862788438797 experiment 0.411679929434581 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 MARS ENSG00000166986 CDS Human protein_coding chr12:57906606 chr12:57906613 synonymous SNV . 0 hm6A_associated_SNPs_60933 0 0 1 1 57906603 57906624 mRNA hsa-miR-214 MARS miRanda miRanda
14034 chr12 57906613 57906613 1 + G A SKCM 57906624 + 57906604 57906644 41 GGACACGGGGATCCCTGCTGACATCTGGCGCTTCTATCTGC GGACACGGGAATCCCTGCTGACATCTGGCGCTTCTATCTGC < 41bp 1 0.792242492784932 1 0.119940996170044 experiment 0.415515014430137 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 MARS ENSG00000166986 CDS Human protein_coding chr12:57906624 chr12:57906613 synonymous SNV . 0 hm6A_associated_SNPs_60934 0 0 1 1 57906603 57906624 mRNA hsa-miR-214 MARS miRanda miRanda
14034 chr3 148884866 148884866 1 + T C SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGC < 41bp 1 0.625551085257196 1 0.0340257287025452 experiment 0.748897829485609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884866 nonsynonymous SNV 0.995 1 hm6A_associated_SNPs_60993 0 0 1 5 148884852 148884868 mRNA hsa-miR-191 HPS3 miRanda miRanda
14034 chr3 148884866 148884866 1 + T C SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGC < 41bp 1 0.625551085257196 1 0.0340257287025452 experiment 0.748897829485609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884866 nonsynonymous SNV 0.995 1 hm6A_associated_SNPs_60993 0 0 1 5 148884858 148884881 mRNA hsa-miR-302d HPS3 miRanda miRanda
14034 chr3 148884866 148884866 1 + T C SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGC < 41bp 1 0.625551085257196 1 0.0340257287025452 experiment 0.748897829485609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884866 nonsynonymous SNV 0.995 1 hm6A_associated_SNPs_60993 0 0 1 5 148884858 148884881 mRNA hsa-miR-372 HPS3 miRanda miRanda
14034 chr3 148884866 148884866 1 + T C SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGC < 41bp 1 0.625551085257196 1 0.0340257287025452 experiment 0.748897829485609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884866 nonsynonymous SNV 0.995 1 hm6A_associated_SNPs_60993 0 0 1 5 148884858 148884881 mRNA hsa-miR-373 HPS3 miRanda miRanda
14034 chr3 148884866 148884866 1 + T C SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGC < 41bp 1 0.625551085257196 1 0.0340257287025452 experiment 0.748897829485609 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 41 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884866 nonsynonymous SNV 0.995 1 hm6A_associated_SNPs_60993 0 0 1 5 148884859 148884882 mRNA hsa-miR-20b HPS3 miRanda miRanda
14034 chr7 149430690 149430690 1 + C T SKCM 149430680 + 149430660 149430700 41 CCCTACTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAA CCCTACTGGAGGCAGAAGGGACCCACGAGGTCTAAACCAAA < 41bp 1 0.796952080037379 1 0.986110329627991 experiment 0.406095839925243 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 31 KRBA1 ENSG00000133619 CDS Human protein_coding chr7:149430680 chr7:149430690 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_61012 0 0 0 1 149430680 149430702 mRNA hsa-miR-9 KRBA1 miRanda miRanda
14034 chr9 139563056 139563056 1 + C T SKCM 139563041 + 139563021 139563061 41 TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTCG TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTTGTTCG < 41bp 1 0.134508864453083 1 0.332461357116699 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139563041 chr9:139563056 nonsynonymous SNV 0.318 2 hm6A_associated_SNPs_61022 0 0 1 2 139563051 139563074 mRNA hsa-miR-362-3p EGFL7 miRanda miRanda
14034 chr9 139563056 139563056 1 + C T SKCM 139563041 + 139563021 139563061 41 TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTCG TGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTTGTTCG < 41bp 1 0.134508864453083 1 0.332461357116699 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139563041 chr9:139563056 nonsynonymous SNV 0.318 2 hm6A_associated_SNPs_61022 0 0 1 2 139563051 139563074 mRNA hsa-miR-329 EGFL7 miRanda miRanda
14034 chr4 146044633 146044633 1 + C T SKCM 146044652 + 146044632 146044672 41 TCATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACAT TTATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACAT < 41bp 1 0.710806007535554 1 0.934098422527313 experiment 0.578387984928892 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 2 ABCE1 ENSG00000164163 CDS Human protein_coding chr4:146044652 chr4:146044633 synonymous SNV . 0 hm6A_associated_SNPs_61052 0 0 1 1 146044633 146044650 mRNA hsa-miR-129-5p ABCE1 miRanda miRanda
14034 chr2 277050 277050 1 + C T SKCM 277031 + 277011 277051 41 ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATTC < 41bp 1 0.55849087180342 1 0.874114513397217 experiment 0.88301825639316 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 40 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277031 chr2:277050 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61058 0 0 1 3 277050 277071 mRNA hsa-miR-374a ACP1 miRanda miRanda
14034 chr2 277050 277050 1 + C T SKCM 277031 + 277011 277051 41 ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATTC < 41bp 1 0.55849087180342 1 0.874114513397217 experiment 0.88301825639316 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 40 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277031 chr2:277050 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61058 0 0 1 3 277045 277065 mRNA hsa-miR-382 ACP1 miRanda miRanda
14034 chr2 277050 277050 1 + C T SKCM 277031 + 277011 277051 41 ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATCC ACCTGCAAAGCTAAAATTGAACTACTTGGGAGCTATGATTC < 41bp 1 0.55849087180342 1 0.874114513397217 experiment 0.88301825639316 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 40 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277031 chr2:277050 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61058 0 0 1 3 277050 277071 mRNA hsa-miR-374b ACP1 miRanda miRanda
14034 chr2 277050 277050 1 + C T SKCM 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATTCACAAAAACAACTTATTATTGAAGATCC < 41bp 1 0.745222836100607 1 0.708978474140167 experiment 0.509554327798787 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277050 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61059 0 0 1 3 277050 277071 mRNA hsa-miR-374a ACP1 miRanda miRanda
14034 chr2 277050 277050 1 + C T SKCM 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATTCACAAAAACAACTTATTATTGAAGATCC < 41bp 1 0.745222836100607 1 0.708978474140167 experiment 0.509554327798787 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277050 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61059 0 0 1 3 277045 277065 mRNA hsa-miR-382 ACP1 miRanda miRanda
14034 chr2 277050 277050 1 + C T SKCM 277058 + 277038 277078 41 GGGAGCTATGATCCACAAAAACAACTTATTATTGAAGATCC GGGAGCTATGATTCACAAAAACAACTTATTATTGAAGATCC < 41bp 1 0.745222836100607 1 0.708978474140167 experiment 0.509554327798787 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 ACP1 ENSG00000143727 CDS Human protein_coding chr2:277058 chr2:277050 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61059 0 0 1 3 277050 277071 mRNA hsa-miR-374b ACP1 miRanda miRanda
14034 chr4 74279335 74279335 1 + G A SKCM 74279318 + 74279298 74279338 41 AAGTAAGGATGTTTGCAAAAACTATGCTGAGGCAAAGGATG AAGTAAGGATGTTTGCAAAAACTATGCTGAGGCAAAGAATG < 41bp 1 0.207146583992513 1 0.770426750183105 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 ALB ENSG00000163631 CDS Human protein_coding chr4:74279318 chr4:74279335 nonsynonymous SNV 0.990 0 hm6A_associated_SNPs_61093 0 0 1 1 74279326 74279345 mRNA hsa-miR-7 ALB miRanda miRanda
14034 chr4 52779501 52779501 1 + C A SKCM 52779516 + 52779496 52779536 41 ATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCTCAGC ATGTCATAGAGTTTAGCAGAACAATTAATCTTGACCTCAGC < 41bp 1 0.799303412904014 1 0.228511363267899 experiment 0.401393174191973 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52779516 chr4:52779501 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_61104 0 0 1 1 52779498 52779520 mRNA hsa-miR-375 DCUN1D4 miRanda miRanda
14034 chr5 134147456 134147456 1 + C T SKCM 134147446 + 134147426 134147466 41 AGGGATTCAAGTTTGATGAAACAGAACAAGCTTTGGCTAAT AGGGATTCAAGTTTGATGAAACAGAACAAGTTTTGGCTAAT < 41bp 1 0.521987919597214 1 0.788908004760742 experiment 0.956024160805572 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 31 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134147446 chr5:134147456 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_61114 0 0 1 1 134147438 134147459 mRNA hsa-miR-382 DDX46 miRanda miRanda
14034 chr8 91031361 91031361 1 + C G SKCM 91031373 + 91031353 91031393 41 GTTCAAAACACTGTGTCAGAACTGATCAAAGTTGCAGGACA GTTCAAAAGACTGTGTCAGAACTGATCAAAGTTGCAGGACA < 41bp 1 0.158851958595439 1 0.934849381446838 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 DECR1 ENSG00000104325 CDS Human protein_coding chr8:91031373 chr8:91031361 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_61118 0 0 1 1 91031348 91031368 mRNA hsa-miR-128 DECR1 miRanda miRanda
14034 chr14 95080919 95080919 1 + C T SKCM 95080915 + 95080895 95080935 41 AGACCGAGGGACACACGTGGACCTCGGATTAGCCTCCGCCA AGACCGAGGGACACACGTGGACCTTGGATTAGCCTCCGCCA < 41bp 1 0.226541995312268 1 0.995963573455811 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 25 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95080915 chr14:95080919 synonymous SNV . 0 hm6A_associated_SNPs_61135 0 0 1 1 95080918 95080943 mRNA hsa-miR-145 SERPINA3 miRanda miRanda
14034 chr4 74280830 74280830 1 + C T SKCM 74280819 + 74280799 74280839 41 TGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAG TGCTGCTGAGACTTGCCAAGACATATGAAACTACTCTAGAG < 41bp 1 0.438915786626773 1 0.0747854113578796 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 32 ALB ENSG00000163631 CDS Human protein_coding chr4:74280819 chr4:74280830 synonymous SNV . 0 hm6A_associated_SNPs_61155 0 0 1 1 74280816 74280834 mRNA hsa-miR-140-5p ALB miRanda miRanda
14034 chr4 74280830 74280830 1 + C T SKCM 74280828 + 74280808 74280848 41 GACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGT GACTTGCCAAGACATATGAAACTACTCTAGAGAAGTGCTGT < 41bp 1 0.152590354358891 1 0.0468820035457611 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 23 ALB ENSG00000163631 CDS Human protein_coding chr4:74280828 chr4:74280830 synonymous SNV . 0 hm6A_associated_SNPs_61156 0 0 1 1 74280816 74280834 mRNA hsa-miR-140-5p ALB miRanda miRanda
14034 chrX 73046489 73046489 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCTCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.163289481354808 1 0.722339034080505 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046489 . . 0 hm6A_associated_SNPs_61163 0 0 1 2 73046488 73046509 lncRNA hsa-miR-3167 XIST miRanda starBase2
14034 chrX 73046489 73046489 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCTCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.163289481354808 1 0.722339034080505 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046489 . . 0 hm6A_associated_SNPs_61163 0 0 1 2 73046488 73046509 lncRNA hsa-miR-876-5p XIST miRanda starBase2
14034 chrX 73046489 73046489 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCTCAAGATGAGAACCCTAAACCCTACCTCTTTT < 41bp 1 0.336729131050166 1 0.786144375801086 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046489 . . 0 hm6A_associated_SNPs_61164 0 0 1 2 73046488 73046509 lncRNA hsa-miR-3167 XIST miRanda starBase2
14034 chrX 73046489 73046489 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCTCAAGATGAGAACCCTAAACCCTACCTCTTTT < 41bp 1 0.336729131050166 1 0.786144375801086 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046489 . . 0 hm6A_associated_SNPs_61164 0 0 1 2 73046488 73046509 lncRNA hsa-miR-876-5p XIST miRanda starBase2
14034 chrX 73046489 73046489 1 - G A SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCTCAAGATG < 41bp 1 0.331862693630729 1 0.751577615737915 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046489 . . 0 hm6A_associated_SNPs_61165 0 0 1 2 73046488 73046509 lncRNA hsa-miR-3167 XIST miRanda starBase2
14034 chrX 73046489 73046489 1 - G A SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCTCAAGATG < 41bp 1 0.331862693630729 1 0.751577615737915 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046489 . . 0 hm6A_associated_SNPs_61165 0 0 1 2 73046488 73046509 lncRNA hsa-miR-876-5p XIST miRanda starBase2
14034 chr15 25327975 25327975 1 + T G SKCM 25327958 + 25327938 25327978 41 TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACGCTA < 41bp 1 0.0814856625752379 1 0.165258496999741 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 SNORD116-16 ENSG00000207263 ncRNA_exonic Human snoRNA chr15:25327958 chr15:25327975 . . 0 hm6A_associated_SNPs_61170 0 0 0 1 25327966 25327986 mRNA hsa-miR-202 SNORD116-16 miRanda miRanda
14034 chrX 73046784 73046784 1 - C T SKCM 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCAAAGGCCTGAGTTGGATG < 41bp 1 0.509987291082351 1 0.378183007240295 experiment 0.980025417835298 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046784 . . 0 hm6A_associated_SNPs_61211 0 0 1 3 73046776 73046796 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046784 73046784 1 - C T SKCM 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCAAAGGCCTGAGTTGGATG < 41bp 1 0.509987291082351 1 0.378183007240295 experiment 0.980025417835298 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046784 . . 0 hm6A_associated_SNPs_61211 0 0 1 3 73046776 73046797 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046784 73046784 1 - C T SKCM 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCAAAGGCCTGAGTTGGATG < 41bp 1 0.509987291082351 1 0.378183007240295 experiment 0.980025417835298 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046784 . . 0 hm6A_associated_SNPs_61211 0 0 1 3 73046772 73046795 lncRNA hsa-miR-510-5p XIST miRanda starBase2
14034 chr10 62551976 62551976 1 + C T SKCM 62551959 + 62551939 62551979 41 AGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA AGAAGTGGAATCTTTACAGGACTATAAGAATACATTTTCCA < 41bp 1 0.757743222371888 1 0.939949154853821 experiment 0.484513555256224 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 38 CDK1 ENSG00000170312 CDS Human protein_coding chr10:62551959 chr10:62551976 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_61230 0 0 1 1 62551957 62551978 mRNA hsa-miR-203 CDK1 miRanda miRanda
14034 chr14 51368616 51368616 1 + C T SKCM 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAATCTTTTCTAATG < 41bp 1 0.484310304005856 1 0.26715886592865 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368616 nonsynonymous SNV 0.986 1 hm6A_associated_SNPs_61240 0 0 0 3 51368606 51368627 mRNA hsa-miR-23a ABHD12B miRanda miRanda
14034 chr14 51368616 51368616 1 + C T SKCM 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAATCTTTTCTAATG < 41bp 1 0.484310304005856 1 0.26715886592865 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368616 nonsynonymous SNV 0.986 1 hm6A_associated_SNPs_61240 0 0 0 3 51368606 51368627 mRNA hsa-miR-23b ABHD12B miRanda miRanda
14034 chr14 51368616 51368616 1 + C T SKCM 51368602 + 51368582 51368622 41 TATGGATGCCCTGAGAAAAGACAAAATAATCTTTCCTAATG TATGGATGCCCTGAGAAAAGACAAAATAATCTTTTCTAATG < 41bp 1 0.484310304005856 1 0.26715886592865 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51368602 chr14:51368616 nonsynonymous SNV 0.986 1 hm6A_associated_SNPs_61240 0 0 0 3 51368613 51368629 mRNA hsa-miR-543 ABHD12B miRanda miRanda
14034 chr3 148884855 148884855 1 + C T SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTTCATTATTCCGT < 41bp 1 0.651772292959238 1 0.0325516164302826 experiment 0.696455414081524 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884855 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61253 0 0 1 5 148884852 148884868 mRNA hsa-miR-191 HPS3 miRanda miRanda
14034 chr3 148884855 148884855 1 + C T SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTTCATTATTCCGT < 41bp 1 0.651772292959238 1 0.0325516164302826 experiment 0.696455414081524 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884855 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61253 0 0 1 5 148884852 148884856 mRNA hsa-miR-320a HPS3 miRanda miRanda
14034 chr3 148884855 148884855 1 + C T SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTTCATTATTCCGT < 41bp 1 0.651772292959238 1 0.0325516164302826 experiment 0.696455414081524 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884855 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61253 0 0 1 5 148884852 148884856 mRNA hsa-miR-320b HPS3 miRanda miRanda
14034 chr3 148884855 148884855 1 + C T SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTTCATTATTCCGT < 41bp 1 0.651772292959238 1 0.0325516164302826 experiment 0.696455414081524 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884855 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61253 0 0 1 5 148884852 148884856 mRNA hsa-miR-320c HPS3 miRanda miRanda
14034 chr3 148884855 148884855 1 + C T SKCM 148884846 + 148884826 148884866 41 TATATGTGGTCCTTCATTTGACATAGCTTCCATTATTCCGT TATATGTGGTCCTTCATTTGACATAGCTTTCATTATTCCGT < 41bp 1 0.651772292959238 1 0.0325516164302826 experiment 0.696455414081524 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 30 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148884846 chr3:148884855 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_61253 0 0 1 5 148884852 148884856 mRNA hsa-miR-320d HPS3 miRanda miRanda
14034 chr15 49917424 49917424 1 + G A SKCM 49917428 + 49917408 49917448 41 ATAGTTCAAAATTTGTGGAAACAAAACAGTCACAAACTACT ATAGTTCAAAATTTGTAGAAACAAAACAGTCACAAACTACT < 41bp 1 0.755504069330828 1 0.834856748580933 experiment 0.488991861338344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917428 chr15:49917424 synonymous SNV . 0 hm6A_associated_SNPs_61289 0 0 0 2 49917420 49917441 mRNA hsa-miR-134 DTWD1 miRanda miRanda
14034 chr15 49917424 49917424 1 + G A SKCM 49917428 + 49917408 49917448 41 ATAGTTCAAAATTTGTGGAAACAAAACAGTCACAAACTACT ATAGTTCAAAATTTGTAGAAACAAAACAGTCACAAACTACT < 41bp 1 0.755504069330828 1 0.834856748580933 experiment 0.488991861338344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917428 chr15:49917424 synonymous SNV . 0 hm6A_associated_SNPs_61289 0 0 0 2 49917417 49917443 mRNA hsa-miR-758 DTWD1 miRanda miRanda
14034 chr4 74274469 74274469 1 + G A SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAAGTTGATGTGATGTG < 41bp 1 0.0620069284683517 1 0.889322519302368 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 27 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274469 synonymous SNV . 0 hm6A_associated_SNPs_61299 0 0 1 5 74274465 74274489 mRNA hsa-miR-148a ALB miRanda miRanda
14034 chr4 74274469 74274469 1 + G A SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAAGTTGATGTGATGTG < 41bp 1 0.0620069284683517 1 0.889322519302368 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 27 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274469 synonymous SNV . 0 hm6A_associated_SNPs_61299 0 0 1 5 74274469 74274489 mRNA hsa-miR-152 ALB miRanda miRanda
14034 chr4 74274469 74274469 1 + G A SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAAGTTGATGTGATGTG < 41bp 1 0.0620069284683517 1 0.889322519302368 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 27 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274469 synonymous SNV . 0 hm6A_associated_SNPs_61299 0 0 1 5 74274465 74274488 mRNA hsa-miR-301a ALB miRanda miRanda
14034 chr4 74274469 74274469 1 + G A SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAAGTTGATGTGATGTG < 41bp 1 0.0620069284683517 1 0.889322519302368 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 27 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274469 synonymous SNV . 0 hm6A_associated_SNPs_61299 0 0 1 5 74274465 74274489 mRNA hsa-miR-148b ALB miRanda miRanda
14034 chr4 74274469 74274469 1 + G A SKCM 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAAGTTGATGTGATGTG < 41bp 1 0.0620069284683517 1 0.889322519302368 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 27 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274469 synonymous SNV . 0 hm6A_associated_SNPs_61299 0 0 1 5 74274465 74274488 mRNA hsa-miR-301b ALB miRanda miRanda
14034 chr8 124117616 124117616 1 + G A SKCM 124117606 + 124117586 124117626 41 GTGATCTTAAGATGAAAGTAACATCAGGGAGAGTACAGCAG GTGATCTTAAGATGAAAGTAACATCAGGGAAAGTACAGCAG < 41bp 1 0.421606457619865 1 0.060105174779892 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124117606 chr8:124117616 nonsynonymous SNV 0.663 0 hm6A_associated_SNPs_61349 0 0 1 1 124117610 124117632 mRNA hsa-miR-138 WDR67 miRanda miRanda
14034 chrX 153662748 153662748 1 + G A SKCM 153662751 + 153662731 153662771 41 CTCACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTT CTCACCTTTGGGGTGCAAGAACTCAACCTGACTGGCTCCTT < 41bp 1 0.364311250732641 1 0.612955152988434 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153662751 chrX:153662748 synonymous SNV . 0 hm6A_associated_SNPs_61398 0 0 1 1 153662740 153662761 mRNA hsa-miR-125a-3p ATP6AP1 miRanda miRanda
14034 chr7 86794313 86794313 1 + T G SKCM 86794307 + 86794287 86794327 41 AGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGG AGTAACAGTAGAAACTGTGAACTCTGGGACTTTGACTCAGG < 41bp 1 0.552201397660798 1 0.977836728096008 experiment 0.895597204678404 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794307 chr7:86794313 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_61477 0 0 1 1 86794301 86794319 mRNA hsa-miR-224 DMTF1 miRanda miRanda
14034 chr7 86794313 86794313 1 + T G SKCM 86794328 + 86794308 86794348 41 CTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTC CTCTGGGACTTTGACTCAGGACACAGAAGGGAATCTCATTC < 41bp 1 0.636281042766693 1 0.93021297454834 experiment 0.727437914466613 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794328 chr7:86794313 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_61478 0 0 1 1 86794301 86794319 mRNA hsa-miR-224 DMTF1 miRanda miRanda
14034 chr1 150065677 150065677 1 + C T SKCM 150065668 + 150065648 150065688 41 ATCAACCTTTCCTACATGAAACCCTGGATCATCTCATCAAA ATCAACCTTTCCTACATGAAACCCTGGATTATCTCATCAAA < 41bp 1 0.237402203915173 1 0.00141024589538574 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 30 VPS45 ENSG00000136631 CDS Human protein_coding chr1:150065668 chr1:150065677 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_61553 0 0 1 1 150065663 150065683 mRNA hsa-miR-143 VPS45 miRanda miRanda
14034 chr7 92085780 92085780 1 + C T SKCM 92085795 + 92085775 92085815 41 TTTCCCACAGTTCCCACCAGACCAGAGAAGGGCTACATATG TTTCCTACAGTTCCCACCAGACCAGAGAAGGGCTACATATG < 41bp 1 0.704543446350072 1 0.928871810436249 experiment 0.590913107299857 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92085795 chr7:92085780 synonymous SNV . 0 hm6A_associated_SNPs_61562 0 0 1 1 92085767 92085789 mRNA hsa-miR-206 GATAD1 miRanda miRanda
14034 chr5 118729000 118729000 1 + C T SKCM 118729016 + 118728996 118729036 41 AATCCTTTTGGGAATTTTAAACCCCACTTACAAAAACTATG AATCTTTTTGGGAATTTTAAACCCCACTTACAAAAACTATG < 41bp 1 0.641693739379329 1 0.99233877658844 experiment 0.716612521241341 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118729016 chr5:118729000 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_61646 0 0 1 1 118728987 118729010 mRNA hsa-miR-150 TNFAIP8 miRanda miRanda
14034 chr19 17384948 17384948 1 + C T SKCM 17384928 + 17384908 17384948 41 CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTC CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTT < 41bp 1 0.178633159008931 1 0.848718881607056 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17384928 chr19:17384948 synonymous SNV . 0 hm6A_associated_SNPs_61658 0 0 1 3 17384946 17384966 mRNA hsa-miR-376a C19orf62 miRanda miRanda
14034 chr19 17384948 17384948 1 + C T SKCM 17384928 + 17384908 17384948 41 CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTC CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTT < 41bp 1 0.178633159008931 1 0.848718881607056 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17384928 chr19:17384948 synonymous SNV . 0 hm6A_associated_SNPs_61658 0 0 1 3 17384945 17384966 mRNA hsa-miR-376b C19orf62 miRanda miRanda
14034 chr19 17384948 17384948 1 + C T SKCM 17384928 + 17384908 17384948 41 CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTC CCCTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTT < 41bp 1 0.178633159008931 1 0.848718881607056 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 41 BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17384928 chr19:17384948 synonymous SNV . 0 hm6A_associated_SNPs_61658 0 0 1 3 17384937 17384960 mRNA hsa-miR-708 C19orf62 miRanda miRanda
14034 chr19 17379868 17379868 1 + C T SKCM 17379871 + 17379851 17379891 41 CCCCTGAGGTCCAAATTCGGACACCAAGGGTCAACTGTCCA CCCCTGAGGTCCAAATTTGGACACCAAGGGTCAACTGTCCA < 41bp 1 0.625245222345412 1 0.856350064277649 experiment 0.749509555309175 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 18 BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17379871 chr19:17379868 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_61665 0 0 1 1 17379860 17379882 mRNA hsa-miR-10a C19orf62 miRanda miRanda
14034 chr7 98941935 98941935 1 + G A SKCM 98941922 + 98941902 98941942 41 TGTCTCACTTGCAGGTATTGACTGGGCTCCCAAGAGCGACC TGTCTCACTTGCAGGTATTGACTGGGCTCCCAAAAGCGACC < 41bp 1 0.302570681931177 1 0.560228049755096 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 34 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98941922 chr7:98941935 synonymous SNV . 0 hm6A_associated_SNPs_61732 0 0 0 2 98941934 98941958 mRNA hsa-miR-128 ARPC1A miRanda miRanda
14034 chr7 98941935 98941935 1 + G A SKCM 98941922 + 98941902 98941942 41 TGTCTCACTTGCAGGTATTGACTGGGCTCCCAAGAGCGACC TGTCTCACTTGCAGGTATTGACTGGGCTCCCAAAAGCGACC < 41bp 1 0.302570681931177 1 0.560228049755096 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 34 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98941922 chr7:98941935 synonymous SNV . 0 hm6A_associated_SNPs_61732 0 0 0 2 98941928 98941954 mRNA hsa-miR-454 ARPC1A miRanda miRanda
14034 chr10 69881752 69881752 1 + A C SKCM 69881734 + 69881714 69881754 41 TAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT TAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGCAT < 41bp 1 0.671835906989412 1 0.990528583526611 experiment 0.656328186021175 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881734 chr10:69881752 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_61800 0 0 1 1 69881731 69881753 mRNA hsa-miR-145 MYPN miRanda miRanda
14034 chr10 69881752 69881752 1 + A C SKCM 69881747 + 69881727 69881767 41 TGCAAAAACCACAAGAGTAAACTGGAATCTCAAAACAAAGT TGCAAAAACCACAAGAGTAAACTGGCATCTCAAAACAAAGT < 41bp 1 0.763634223134229 1 0.99352353811264 experiment 0.472731553731541 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881747 chr10:69881752 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_61801 0 0 1 1 69881731 69881753 mRNA hsa-miR-145 MYPN miRanda miRanda
14034 chr1 233807177 233807177 1 + C T SKCM 233807182 + 233807162 233807202 41 GTCCTTCTCCTCGATCACAGACCAGGCAGCTGGCATGAAAG GTCCTTCTCCTCGATTACAGACCAGGCAGCTGGCATGAAAG < 41bp 1 0.719861661234698 1 0.942296743392944 experiment 0.560276677530605 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 16 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807182 chr1:233807177 synonymous SNV . 0 hm6A_associated_SNPs_61833 0 0 1 1 233807172 233807193 mRNA hsa-miR-22 KCNK1 miRanda miRanda
14034 chr17 16342904 16342904 1 + C T SKCM 16342921 + 16342901 16342941 41 AAACCTCTACAACTTAGTTGACCGTAACTGCCAGAGCCCTG AAATCTCTACAACTTAGTTGACCGTAACTGCCAGAGCCCTG < 41bp 1 0.0459264570545259 1 0.815863132476807 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342921 chr17:16342904 . . 0 hm6A_associated_SNPs_61988 0 0 1 1 16342896 16342916 mRNA hsa-miR-382 NCRNA00188 miRanda miRanda
14034 chr17 16342905 16342905 1 + C T SKCM 16342921 + 16342901 16342941 41 AAACCTCTACAACTTAGTTGACCGTAACTGCCAGAGCCCTG AAACTTCTACAACTTAGTTGACCGTAACTGCCAGAGCCCTG < 41bp 1 0.054423745636196 1 0.865289390087128 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342921 chr17:16342905 . . 0 hm6A_associated_SNPs_61990 0 0 1 1 16342896 16342916 mRNA hsa-miR-382 NCRNA00188 miRanda miRanda
14034 chr22 35719532 35719532 1 + T G SKCM 35719525 + 35719505 35719545 41 TCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTAT TCCGCAGCTCGCCCGATCTGACAGGTGGGGTCACCATCTAT < 41bp 1 0.467084040018727 1 0.473549395799637 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 28 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719525 chr22:35719532 nonsynonymous SNV 0.919 4 hm6A_associated_SNPs_61991 0 0 0 1 35719509 35719533 mRNA hsa-miR-10a TOM1 miRanda miRanda
14034 chrX 73040545 73040545 1 - C T SKCM 73040538 - 73040518 73040558 41 AGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGCTATT AGATGTCACAATTAAAACAAACTGGGGAGTTGGTTGCTATT < 41bp 1 0.333046832275491 1 0.224277853965759 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 14 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040538 chrX:73040545 . . 0 hm6A_associated_SNPs_61996 0 0 1 1 73040530 73040550 lncRNA hsa-miR-2355-5p XIST miRanda starBase2
14034 chrX 73040545 73040545 1 - C T SKCM 73040542 - 73040522 73040562 41 ATCTAGATGTCACAATTGAAACAAACTGGGGAGTTGGTTGC ATCTAGATGTCACAATTAAAACAAACTGGGGAGTTGGTTGC < 41bp 1 0.606627144481349 1 0.0725709199905396 experiment 0.786745711037302 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 18 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040542 chrX:73040545 . . 0 hm6A_associated_SNPs_61997 0 0 1 1 73040530 73040550 lncRNA hsa-miR-2355-5p XIST miRanda starBase2
14034 chr8 6614836 6614836 1 + G A SKCM 6614826 + 6614806 6614846 41 TGACTGCAGGCATGCTTATGACCGATGCTGGAAGGAAGCTG TGACTGCAGGCATGCTTATGACCGATGCTGAAAGGAAGCTG < 41bp 1 0.746078213885182 1 0.963209509849548 experiment 0.507843572229635 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 31 AGPAT5 ENSG00000155189 CDS Human protein_coding chr8:6614826 chr8:6614836 nonsynonymous SNV 0.877 4 hm6A_associated_SNPs_62001 0 0 1 1 6614816 6614837 mRNA hsa-miR-338-3p AGPAT5 miRanda miRanda
14034 chr6 88376767 88376767 1 + G C SKCM 88376763 + 88376743 88376783 41 TTTATTAGAGCTGTTTCTGAACTAGAACTTTTAGGATTTAT TTTATTAGAGCTGTTTCTGAACTACAACTTTTAGGATTTAT < 41bp 1 0.591625572053325 1 0.14867827296257 experiment 0.816748855893351 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88376763 chr6:88376767 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_62048 0 0 1 1 88376764 88376785 mRNA hsa-miR-340 ORC3L miRanda miRanda
14034 chr20 18462387 18462387 1 + T C SKCM 18462376 + 18462356 18462396 41 ACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGC ACAGTTGGCAGTGTAGATGGACACATGAAACCGTACAGGGC < 41bp 1 0.747468290761894 1 0.791257619857788 experiment 0.505063418476213 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462376 chr20:18462387 nonsynonymous SNV 0.983 2 hm6A_associated_SNPs_62051 0 0 1 2 18462374 18462395 mRNA hsa-miR-486-5p POLR3F miRanda miRanda
14034 chr20 18462387 18462387 1 + T C SKCM 18462376 + 18462356 18462396 41 ACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGC ACAGTTGGCAGTGTAGATGGACACATGAAACCGTACAGGGC < 41bp 1 0.747468290761894 1 0.791257619857788 experiment 0.505063418476213 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462376 chr20:18462387 nonsynonymous SNV 0.983 2 hm6A_associated_SNPs_62051 0 0 1 2 18462377 18462398 mRNA hsa-miR-874 POLR3F miRanda miRanda
14034 chr7 104748312 104748312 1 + T C SKCM 104748310 + 104748290 104748330 41 TTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGATC TTGTATCTGGTTTCGGACGGACCGTTAATGACAATTTGATC < 41bp 1 0.589516015604466 1 0.998175203800201 experiment 0.820967968791067 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748310 chr7:104748312 synonymous SNV . 0 hm6A_associated_SNPs_62052 0 0 1 2 104748292 104748316 mRNA hsa-miR-212 MLL5 miRanda miRanda
14034 chr7 104748312 104748312 1 + T C SKCM 104748310 + 104748290 104748330 41 TTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGATC TTGTATCTGGTTTCGGACGGACCGTTAATGACAATTTGATC < 41bp 1 0.589516015604466 1 0.998175203800201 experiment 0.820967968791067 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748310 chr7:104748312 synonymous SNV . 0 hm6A_associated_SNPs_62052 0 0 1 2 104748292 104748316 mRNA hsa-miR-132 MLL5 miRanda miRanda
14034 chr2 152321017 152321017 1 + A G SKCM 152321000 + 152320980 152321020 41 TGTGTGAGGAAAAAAATGAAACTAGCAAATATGCAGAATAT TGTGTGAGGAAAAAAATGAAACTAGCAAATATGCAGAGTAT < 41bp 1 0.766900728293227 1 0.802638292312622 experiment 0.466198543413547 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152321000 chr2:152321017 synonymous SNV . 0 hm6A_associated_SNPs_62069 0 0 1 1 152320998 152321018 mRNA hsa-miR-544 RIF1 miRanda miRanda
14034 chr3 179334802 179334802 1 + C T SKCM 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGTTATGTCCCAGAACACTGGGAATATTATAAGGT < 41bp 1 0.720500569763001 1 0.123132735490799 experiment 0.558998860473998 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334802 synonymous SNV . 0 hm6A_associated_SNPs_62088 0 0 1 2 179334795 179334821 mRNA hsa-miR-199a-5p NDUFB5 miRanda miRanda
14034 chr3 179334802 179334802 1 + C T SKCM 179334814 + 179334794 179334834 41 CCAGAAGGCTATGTCCCAGAACACTGGGAATATTATAAGGT CCAGAAGGTTATGTCCCAGAACACTGGGAATATTATAAGGT < 41bp 1 0.720500569763001 1 0.123132735490799 experiment 0.558998860473998 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179334814 chr3:179334802 synonymous SNV . 0 hm6A_associated_SNPs_62088 0 0 1 2 179334796 179334821 mRNA hsa-miR-199b-5p NDUFB5 miRanda miRanda
14034 chr20 3888854 3888854 1 + T G SKCM 3888852 + 3888832 3888872 41 TCAAATGGGCAGAGATAAAAACTTCTCGAGTCTCCACACTG TCAAATGGGCAGAGATAAAAACGTCTCGAGTCTCCACACTG Direct Loss 1 0.684475766825913 1 0.903340220451355 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 PANK2 ENSG00000125779 CDS Human protein_coding chr20:3888852 chr20:3888854 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_62126 0 0 1 2 3888852 3888874 mRNA hsa-miR-199a-5p PANK2 miRanda miRanda
14034 chr20 3888854 3888854 1 + T G SKCM 3888852 + 3888832 3888872 41 TCAAATGGGCAGAGATAAAAACTTCTCGAGTCTCCACACTG TCAAATGGGCAGAGATAAAAACGTCTCGAGTCTCCACACTG Direct Loss 1 0.684475766825913 1 0.903340220451355 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 23 PANK2 ENSG00000125779 CDS Human protein_coding chr20:3888852 chr20:3888854 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_62126 0 0 1 2 3888852 3888874 mRNA hsa-miR-199b-5p PANK2 miRanda miRanda
14034 chrX 155255058 155255058 1 + C T SKCM 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGGCTCCATGACACCTTTCCCCCCAGACCCA < 41bp 1 0.339223609396528 1 0.98147439956665 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255058 . . 0 hm6A_associated_SNPs_62143 0 0 1 2 155255040 155255058 mRNA hsa-miR-18a WASH6P miRanda miRanda
14034 chrX 155255058 155255058 1 + C T SKCM 155255051 + 155255031 155255071 41 GAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACCCA GAATCCTAGGGGGCTCCATGACACCTTTCCCCCCAGACCCA < 41bp 1 0.339223609396528 1 0.98147439956665 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255051 chrX:155255058 . . 0 hm6A_associated_SNPs_62143 0 0 1 2 155255040 155255058 mRNA hsa-miR-18b WASH6P miRanda miRanda
14034 chr3 12458537 12458537 1 + G A SKCM 12458552 + 12458532 12458572 41 CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG CCTGCAAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG < 41bp 1 0.508973256467996 1 0.748314559459686 experiment 0.982053487064008 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 6 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458552 chr3:12458537 nonsynonymous SNV 0.991 5 hm6A_associated_SNPs_62187 0 0 1 1 12458534 12458556 mRNA hsa-miR-224 PPARG miRanda miRanda
14034 chr2 121047196 121047196 1 + C T SKCM 121047215 + 121047195 121047235 41 TCCACTGCTCGTCGTGGGAAACAAGTCTGACCTAGAGGAGC TTCACTGCTCGTCGTGGGAAACAAGTCTGACCTAGAGGAGC < 41bp 1 0.622225891649123 1 0.40609872341156 experiment 0.755548216701755 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 2 RALB ENSG00000144118 CDS Human protein_coding chr2:121047215 chr2:121047196 nonsynonymous SNV 0.521 4 hm6A_associated_SNPs_62254 0 0 1 1 121047174 121047196 mRNA hsa-miR-590-3p RALB miRanda miRanda
14034 chr17 57262831 57262831 1 + C T SKCM 57262820 + 57262800 57262840 41 GAGTTTAGAAGTATTGAAAGACACCATCTTTCCATCTCGTA GAGTTTAGAAGTATTGAAAGACACCATCTTTTCATCTCGTA < 41bp 1 0.583164888328115 1 0.0158168375492096 experiment 0.83367022334377 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262820 chr17:57262831 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_62267 0 0 1 1 57262818 57262838 mRNA hsa-miR-143 PRR11 miRanda miRanda
14034 chr11 134241356 134241356 1 + G A SKCM 134241349 + 134241329 134241369 41 AGTATCCATAGGATTCTTGGACTACAAGACAACGAAGATTG AGTATCCATAGGATTCTTGGACTACAAAACAACGAAGATTG < 41bp 1 0.269063575706459 1 0.892806589603424 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 28 GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134241349 chr11:134241356 synonymous SNV . 0 hm6A_associated_SNPs_62279 0 0 0 1 134241341 134241363 mRNA hsa-miR-187 GLB1L2 miRanda miRanda
14034 chr11 62650391 62650391 1 + A C SKCM 62650398 + 62650378 62650418 41 AGGCATCCGTGTCATTCTGGACCTTACTCCCAACTACCGGG AGGCATCCGTGTCCTTCTGGACCTTACTCCCAACTACCGGG < 41bp 1 0.168182898959562 1 0.205750465393066 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62650398 chr11:62650391 nonsynonymous SNV 0.957 3 hm6A_associated_SNPs_62300 0 0 1 1 62650370 62650393 mRNA hsa-miR-425 SLC3A2 miRanda miRanda
14034 chr1 29435854 29435854 1 + G A SKCM 29435867 + 29435847 29435887 41 GACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGC GACTGACAACAACAGTGGAGACTTGGACCCAGGAGTCTTGC < 41bp 1 0.136948343937559 1 0.867948293685913 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 EPB41 ENSG00000159023 CDS Human protein_coding chr1:29435867 chr1:29435854 nonsynonymous SNV 0.905 1 hm6A_associated_SNPs_62326 0 0 1 1 29435848 29435859 mRNA hsa-miR-599 EPB41 miRanda miRanda
14034 chr1 29435854 29435854 1 + G A SKCM 29435873 + 29435853 29435893 41 CGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAG CAACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAG < 41bp 1 0.168982560257641 1 0.812000393867493 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 EPB41 ENSG00000159023 CDS Human protein_coding chr1:29435873 chr1:29435854 nonsynonymous SNV 0.905 1 hm6A_associated_SNPs_62327 0 0 1 1 29435848 29435859 mRNA hsa-miR-599 EPB41 miRanda miRanda
14034 chr14 66208871 66208871 1 + C T SKCM 66208884 + 66208864 66208904 41 AAACTTCCATTCTTTAGATGACATCTACTATTTTGGGGGCC AAACTTCTATTCTTTAGATGACATCTACTATTTTGGGGGCC < 41bp 1 0.792254391705123 1 0.188227713108063 experiment 0.415491216589755 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 FUT8 ENSG00000033170 CDS Human protein_coding chr14:66208884 chr14:66208871 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_62331 0 0 1 1 66208858 66208879 mRNA hsa-miR-186 FUT8 miRanda miRanda
14034 chr21 47549318 47549318 1 + G A SKCM 47549320 + 47549300 47549340 41 CACCGGGGTAGAGCGGCAGGACTGGATGGAGCTGTTCATTG CACCGGGGTAGAGCGGCAAGACTGGATGGAGCTGTTCATTG < 41bp 1 0.709182272645719 1 0.996294856071472 experiment 0.581635454708563 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47549320 chr21:47549318 synonymous SNV . 0 hm6A_associated_SNPs_62372 0 0 0 2 47549313 47549336 mRNA hsa-miR-212 COL6A2 miRanda miRanda
14034 chr21 47549318 47549318 1 + G A SKCM 47549320 + 47549300 47549340 41 CACCGGGGTAGAGCGGCAGGACTGGATGGAGCTGTTCATTG CACCGGGGTAGAGCGGCAAGACTGGATGGAGCTGTTCATTG < 41bp 1 0.709182272645719 1 0.996294856071472 experiment 0.581635454708563 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 19 COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47549320 chr21:47549318 synonymous SNV . 0 hm6A_associated_SNPs_62372 0 0 0 2 47549312 47549336 mRNA hsa-miR-132 COL6A2 miRanda miRanda
14034 chr1 60294498 60294498 1 + G A SKCM 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGAATGTTGGGGACAACTGGAGAATAAAGGTAT < 41bp 1 0.550329988648995 1 0.108291625976562 experiment 0.89934002270201 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294498 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_62382 0 0 1 1 60294492 60294516 mRNA hsa-miR-199a-5p HOOK1 miRanda miRanda
14034 chr20 2840732 2840732 1 + G T SKCM 2840712 + 2840692 2840732 41 AACTGCAGCACTGCTGAGGAACCCCTGGCGGAAGGAGAAAG AACTGCAGCACTGCTGAGGAACCCCTGGCGGAAGGAGAAAT < 41bp 1 0.141929290976725 1 0.166271507740021 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 41 VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840712 chr20:2840732 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_62434 0 0 1 3 2840732 2840752 mRNA hsa-miR-193a-3p VPS16 miRanda miRanda
14034 chr20 2840732 2840732 1 + G T SKCM 2840712 + 2840692 2840732 41 AACTGCAGCACTGCTGAGGAACCCCTGGCGGAAGGAGAAAG AACTGCAGCACTGCTGAGGAACCCCTGGCGGAAGGAGAAAT < 41bp 1 0.141929290976725 1 0.166271507740021 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 41 VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840712 chr20:2840732 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_62434 0 0 1 3 2840723 2840746 mRNA hsa-miR-342-3p VPS16 miRanda miRanda
14034 chr20 2840732 2840732 1 + G T SKCM 2840712 + 2840692 2840732 41 AACTGCAGCACTGCTGAGGAACCCCTGGCGGAAGGAGAAAG AACTGCAGCACTGCTGAGGAACCCCTGGCGGAAGGAGAAAT < 41bp 1 0.141929290976725 1 0.166271507740021 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 41 VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840712 chr20:2840732 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_62434 0 0 1 3 2840732 2840752 mRNA hsa-miR-193b VPS16 miRanda miRanda
14034 chr14 23240320 23240320 1 + C T SKCM 23240339 + 23240319 23240359 41 CCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCAC CTCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCAC < 41bp 1 0.319190027968863 1 0.550001084804535 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240339 chr14:23240320 nonsynonymous SNV 0.296 3 hm6A_associated_SNPs_62451 0 0 1 1 23240313 23240336 mRNA hsa-miR-505 OXA1L miRanda miRanda
14034 chr7 45104172 45104172 1 + G A SKCM 45104186 + 45104166 45104206 41 CCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG CCTCAGAGTGCCCATCCATGACATCGCCGCCGTCTCCTATG < 41bp 1 0.711206169431412 1 0.379342764616013 experiment 0.577587661137177 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45104186 chr7:45104172 synonymous SNV . 0 hm6A_associated_SNPs_62467 0 0 1 3 45104152 45104174 mRNA hsa-miR-125b CCM2 miRanda miRanda
14034 chr7 45104172 45104172 1 + G A SKCM 45104186 + 45104166 45104206 41 CCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG CCTCAGAGTGCCCATCCATGACATCGCCGCCGTCTCCTATG < 41bp 1 0.711206169431412 1 0.379342764616013 experiment 0.577587661137177 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45104186 chr7:45104172 synonymous SNV . 0 hm6A_associated_SNPs_62467 0 0 1 3 45104151 45104174 mRNA hsa-miR-125a-5p CCM2 miRanda miRanda
14034 chr7 45104172 45104172 1 + G A SKCM 45104186 + 45104166 45104206 41 CCTCAGGGTGCCCATCCATGACATCGCCGCCGTCTCCTATG CCTCAGAGTGCCCATCCATGACATCGCCGCCGTCTCCTATG < 41bp 1 0.711206169431412 1 0.379342764616013 experiment 0.577587661137177 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 7 CCM2 ENSG00000136280 CDS Human protein_coding chr7:45104186 chr7:45104172 synonymous SNV . 0 hm6A_associated_SNPs_62467 0 0 1 3 45104165 45104187 mRNA hsa-miR-433 CCM2 miRanda miRanda
14034 chr22 35719514 35719514 1 + C T SKCM 35719525 + 35719505 35719545 41 TCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTAT TCCGCAGCTTGCCCGATCTGACAGGTGTGGTCACCATCTAT < 41bp 1 0.469124088681183 1 0.554927229881287 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 10 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719525 chr22:35719514 nonsynonymous SNV 0.965 3 hm6A_associated_SNPs_62492 0 0 1 1 35719509 35719533 mRNA hsa-miR-10a TOM1 miRanda miRanda
14034 chrX 73046495 73046495 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGAAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT < 41bp 1 0.349146626355392 1 0.827518820762634 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 4 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046495 . . 0 hm6A_associated_SNPs_62512 0 0 1 3 73046493 73046513 lncRNA hsa-miR-2355-5p XIST miRanda starBase2
14034 chrX 73046495 73046495 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGAAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT < 41bp 1 0.349146626355392 1 0.827518820762634 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 4 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046495 . . 0 hm6A_associated_SNPs_62512 0 0 1 3 73046488 73046509 lncRNA hsa-miR-3167 XIST miRanda starBase2
14034 chrX 73046495 73046495 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGAAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT < 41bp 1 0.349146626355392 1 0.827518820762634 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 4 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046495 . . 0 hm6A_associated_SNPs_62512 0 0 1 3 73046488 73046509 lncRNA hsa-miR-876-5p XIST miRanda starBase2
14034 chrX 73046495 73046495 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACCTGGGAAAATCCCAAGATG < 41bp 1 0.320666008149121 1 0.814058423042297 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046495 . . 0 hm6A_associated_SNPs_62513 0 0 1 3 73046493 73046513 lncRNA hsa-miR-2355-5p XIST miRanda starBase2
14034 chrX 73046495 73046495 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACCTGGGAAAATCCCAAGATG < 41bp 1 0.320666008149121 1 0.814058423042297 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046495 . . 0 hm6A_associated_SNPs_62513 0 0 1 3 73046488 73046509 lncRNA hsa-miR-3167 XIST miRanda starBase2
14034 chrX 73046495 73046495 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACCTGGGAAAATCCCAAGATG < 41bp 1 0.320666008149121 1 0.814058423042297 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046495 . . 0 hm6A_associated_SNPs_62513 0 0 1 3 73046488 73046509 lncRNA hsa-miR-876-5p XIST miRanda starBase2
14034 chr17 30694883 30694883 1 + C T SKCM 30694865 + 30694845 30694885 41 ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTCCC ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTTCC < 41bp 1 0.292391141456269 1 0.913993120193481 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30694865 chr17:30694883 synonymous SNV . 0 hm6A_associated_SNPs_62631 0 0 1 4 30694864 30694885 mRNA hsa-miR-1 ZNF207 miRanda miRanda
14034 chr17 30694883 30694883 1 + C T SKCM 30694865 + 30694845 30694885 41 ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTCCC ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTTCC < 41bp 1 0.292391141456269 1 0.913993120193481 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30694865 chr17:30694883 synonymous SNV . 0 hm6A_associated_SNPs_62631 0 0 1 4 30694880 30694904 mRNA hsa-miR-134 ZNF207 miRanda miRanda
14034 chr17 30694883 30694883 1 + C T SKCM 30694865 + 30694845 30694885 41 ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTCCC ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTTCC < 41bp 1 0.292391141456269 1 0.913993120193481 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30694865 chr17:30694883 synonymous SNV . 0 hm6A_associated_SNPs_62631 0 0 1 4 30694865 30694885 mRNA hsa-miR-206 ZNF207 miRanda miRanda
14034 chr17 30694883 30694883 1 + C T SKCM 30694865 + 30694845 30694885 41 ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTCCC ACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTTCC < 41bp 1 0.292391141456269 1 0.913993120193481 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30694865 chr17:30694883 synonymous SNV . 0 hm6A_associated_SNPs_62631 0 0 1 4 30694868 30694885 mRNA hsa-miR-613 ZNF207 miRanda miRanda
14034 chr20 34053976 34053976 1 + C G SKCM 34053968 + 34053948 34053988 41 TGTGGAAAAACTGACAGTGGACTGGAGCCGGGCCCGGGATG TGTGGAAAAACTGACAGTGGACTGGAGCGGGGCCCGGGATG < 41bp 1 0.271316404360732 1 0.982825934886932 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 CEP250 ENSG00000126001 CDS Human protein_coding chr20:34053968 chr20:34053976 nonsynonymous SNV 0.996 0 hm6A_associated_SNPs_62644 0 0 1 1 34053955 34053977 mRNA hsa-miR-24 CEP250 miRanda miRanda
14034 chr10 27454438 27454438 1 + A G SKCM 27454433 + 27454413 27454453 41 TATGTCTGTAGATCAAAAGGACACTACGCCTTATTCTAGCA TATGTCTGTAGATCAAAAGGACACTGCGCCTTATTCTAGCA < 41bp 1 0.764990607209987 1 0.933086752891541 experiment 0.470018785580026 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 26 MASTL ENSG00000120539 CDS Human protein_coding chr10:27454433 chr10:27454438 nonsynonymous SNV 0.392 1 hm6A_associated_SNPs_62665 0 0 1 1 27454417 27454440 mRNA hsa-miR-142-3p MASTL miRanda miRanda
14034 chr1 162773287 162773287 1 + C T SKCM 162773269 + 162773249 162773289 41 GTACAGCATTGACCAATTTGACATATGGAATTCTGCCTCCG GTACAGCATTGACCAATTTGACATATGGAATTCTGCCTTCG < 41bp 1 0.717086261792988 1 0.31547999382019 experiment 0.565827476414024 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162773269 chr1:162773287 nonsynonymous SNV 0.039 0 hm6A_associated_SNPs_62671 0 0 1 1 162773283 162773309 mRNA hsa-miR-421 HSD17B7 miRanda miRanda
14034 chr16 71674572 71674572 1 + G A SKCM 71674574 + 71674554 71674594 41 TCCAAGGAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGG TCCAAGGAGCCAAGAGTCAAACAATGTTGTCAGGGAAGTGG < 41bp 1 0.409359329341617 1 0.97620677947998 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 19 MARVELD3 ENSG00000140832 CDS Human protein_coding chr16:71674574 chr16:71674572 nonsynonymous SNV 0.039 1 hm6A_associated_SNPs_62683 0 0 0 1 71674554 71674578 mRNA hsa-miR-375 MARVELD3 miRanda miRanda
14034 chr20 21142672 21142672 1 + C T SKCM 21142660 + 21142640 21142680 41 ATCTCCCCAGCCCACAAAGAACTTTTCAATTCCTGACCCAC ATCTCCCCAGCCCACAAAGAACTTTTCAATTCTTGACCCAC < 41bp 1 0.479886291778464 1 0.921709716320038 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142660 chr20:21142672 . 0.997 1 hm6A_associated_SNPs_62725 0 0 1 1 21142662 21142683 mRNA hsa-miR-299-3p PLK1S1 miRanda miRanda
14034 chr20 21142672 21142672 1 + C T SKCM 21142675 + 21142655 21142695 41 AAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGA AAAGAACTTTTCAATTCTTGACCCACATTCACACCGACAGA < 41bp 1 0.33366251202801 1 0.56671679019928 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142675 chr20:21142672 . 0.997 1 hm6A_associated_SNPs_62726 0 0 1 1 21142662 21142683 mRNA hsa-miR-299-3p PLK1S1 miRanda miRanda
14034 chr12 95668613 95668613 1 + C T SKCM 95668631 + 95668611 95668651 41 TTCAGAAGAGGAAGCACATAACTTTACAGATGGCTTCAGCC TTTAGAAGAGGAAGCACATAACTTTACAGATGGCTTCAGCC < 41bp 1 0.284009394514684 1 0.564074337482452 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 VEZT ENSG00000028203 CDS Human protein_coding chr12:95668631 chr12:95668613 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_62754 0 0 1 2 95668609 95668629 mRNA hsa-miR-218 VEZT miRanda miRanda
14034 chr12 95668613 95668613 1 + C T SKCM 95668631 + 95668611 95668651 41 TTCAGAAGAGGAAGCACATAACTTTACAGATGGCTTCAGCC TTTAGAAGAGGAAGCACATAACTTTACAGATGGCTTCAGCC < 41bp 1 0.284009394514684 1 0.564074337482452 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 VEZT ENSG00000028203 CDS Human protein_coding chr12:95668631 chr12:95668613 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_62754 0 0 1 2 95668607 95668630 mRNA hsa-miR-135a VEZT miRanda miRanda
14034 chr1 145116010 145116010 1 + T G SKCM 145115991 + 145115971 145116011 41 TGTATTAGAATCCAAGTGGAACTTCTGCCTCTAAAGACCTT TGTATTAGAATCCAAGTGGAACTTCTGCCTCTAAAGACCGT < 41bp 1 0.348472954177785 1 0.882875680923462 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 40 SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115991 chr1:145116010 . . 0 hm6A_associated_SNPs_62805 0 0 1 1 145116001 145116019 mRNA hsa-miR-431 SEC22B miRanda miRanda
14034 chr1 145116010 145116010 1 + T G SKCM 145116007 + 145115987 145116027 41 TGGAACTTCTGCCTCTAAAGACCTTGCAAGAAAAGAGATGT TGGAACTTCTGCCTCTAAAGACCGTGCAAGAAAAGAGATGT < 41bp 1 0.365127654605415 1 0.812543213367462 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145116007 chr1:145116010 . . 0 hm6A_associated_SNPs_62806 0 0 1 1 145116001 145116019 mRNA hsa-miR-431 SEC22B miRanda miRanda
14034 chr1 145281375 145281375 1 + A C SKCM 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGCGTGCCAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0786075877571266 1 0.215799033641815 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281375 nonsynonymous SNV 0.949 0 hm6A_associated_SNPs_62811 0 0 0 2 145281369 145281383 mRNA hsa-miR-96 NOTCH2NL miRanda miRanda
14034 chr1 145281375 145281375 1 + A C SKCM 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGCGTGCCAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0786075877571266 1 0.215799033641815 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281375 nonsynonymous SNV 0.949 0 hm6A_associated_SNPs_62811 0 0 0 2 145281369 145281383 mRNA hsa-miR-1271 NOTCH2NL miRanda miRanda
14034 chr12 49919822 49919822 1 + T C SKCM 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTATGGGCCGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.799753005226732 1 0.791751444339752 experiment 0.400493989546536 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 10 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919822 synonymous SNV . 0 hm6A_associated_SNPs_62815 0 0 1 2 49919804 49919825 mRNA hsa-miR-551a SPATS2 miRanda miRanda
14034 chr12 49919822 49919822 1 + T C SKCM 49919833 + 49919813 49919853 41 CAGTATGGGTCGTTACAGAAACAGCTCGTGGTATTCATCTG CAGTATGGGCCGTTACAGAAACAGCTCGTGGTATTCATCTG < 41bp 1 0.799753005226732 1 0.791751444339752 experiment 0.400493989546536 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 10 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919833 chr12:49919822 synonymous SNV . 0 hm6A_associated_SNPs_62815 0 0 1 2 49919804 49919825 mRNA hsa-miR-551b SPATS2 miRanda miRanda
14034 chr5 162945270 162945270 1 + C T SKCM 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACTT < 41bp 1 0.711810436603965 1 0.967378377914429 experiment 0.57637912679207 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945270 synonymous SNV . 0 hm6A_associated_SNPs_62851 0 0 1 2 162945262 162945286 mRNA hsa-miR-182 MAT2B miRanda miRanda
14034 chr5 162945270 162945270 1 + C T SKCM 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACTT < 41bp 1 0.711810436603965 1 0.967378377914429 experiment 0.57637912679207 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945270 synonymous SNV . 0 hm6A_associated_SNPs_62851 0 0 1 2 162945259 162945280 mRNA hsa-miR-365 MAT2B miRanda miRanda
14034 chr17 76396798 76396798 1 + C A SKCM 76396796 + 76396776 76396816 41 CTACTTCACCAACCGCCAGGACCGCTACGTGTTCCTGCAGG CTACTTCACCAACCGCCAGGACAGCTACGTGTTCCTGCAGG < 41bp 1 0.409176981657728 1 0.75130569934845 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 23 PGS1 ENSG00000087157 CDS Human protein_coding chr17:76396796 chr17:76396798 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_62862 0 0 1 1 76396794 76396813 mRNA hsa-miR-873 PGS1 miRanda miRanda
14034 chr19 50906828 50906828 1 + C T SKCM 50906811 + 50906791 50906831 41 CACCGGTTACAACATCCAGAACTTCGACCTTCCGTACCTCA CACCGGTTACAACATCCAGAACTTCGACCTTCCGTACTTCA < 41bp 1 0.246639714798679 1 0.907961785793304 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906811 chr19:50906828 nonsynonymous SNV 0.976 4 hm6A_associated_SNPs_62882 0 0 1 1 50906808 50906831 mRNA hsa-miR-98 POLD1 miRanda miRanda
14034 chr19 50906828 50906828 1 + C T SKCM 50906846 + 50906826 50906866 41 ACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGG ACTTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGG < 41bp 1 0.0456247073339246 1 0.889822840690613 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906846 chr19:50906828 nonsynonymous SNV 0.976 4 hm6A_associated_SNPs_62883 0 0 1 1 50906808 50906831 mRNA hsa-miR-98 POLD1 miRanda miRanda
14034 chr19 50906827 50906827 1 + C T SKCM 50906811 + 50906791 50906831 41 CACCGGTTACAACATCCAGAACTTCGACCTTCCGTACCTCA CACCGGTTACAACATCCAGAACTTCGACCTTCCGTATCTCA < 41bp 1 0.264623783593954 1 0.879058241844177 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906811 chr19:50906827 synonymous SNV . 0 hm6A_associated_SNPs_62886 0 0 1 1 50906808 50906831 mRNA hsa-miR-98 POLD1 miRanda miRanda
14034 chr19 50906827 50906827 1 + C T SKCM 50906846 + 50906826 50906866 41 ACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGG ATCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGG < 41bp 1 0.042758950929562 1 0.847764372825623 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906846 chr19:50906827 synonymous SNV . 0 hm6A_associated_SNPs_62887 0 0 1 1 50906808 50906831 mRNA hsa-miR-98 POLD1 miRanda miRanda
14034 chr4 524289 524289 1 + G C SKCM 524290 + 524270 524310 41 TCTGTTCACGGGCACCAAAGACTTACTTAAATCTCAAGTCA TCTGTTCACGGGCACCAAACACTTACTTAAATCTCAAGTCA Direct Loss 1 0.686036261722144 1 0.264967799186707 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 PIGG ENSG00000174227 CDS Human protein_coding chr4:524290 chr4:524289 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_62920 0 0 1 1 524266 524290 mRNA hsa-miR-9 PIGG miRanda miRanda
14034 chr5 76332505 76332505 1 + G A SKCM 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGAACTGTATTTTGACCACAGCAC < 41bp 1 0.279696046296407 1 0.95983898639679 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332505 nonsynonymous SNV 0.981 5 hm6A_associated_SNPs_62996 0 0 0 3 76332503 76332530 mRNA hsa-miR-199a-5p AGGF1 miRanda miRanda
14034 chr5 76332505 76332505 1 + G A SKCM 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGAACTGTATTTTGACCACAGCAC < 41bp 1 0.279696046296407 1 0.95983898639679 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332505 nonsynonymous SNV 0.981 5 hm6A_associated_SNPs_62996 0 0 0 3 76332487 76332506 mRNA hsa-miR-144 AGGF1 miRanda miRanda
14034 chr5 76332505 76332505 1 + G A SKCM 76332506 + 76332486 76332526 41 AGTTATGATGAAAATACTGGACTGTATTTTGACCACAGCAC AGTTATGATGAAAATACTGAACTGTATTTTGACCACAGCAC < 41bp 1 0.279696046296407 1 0.95983898639679 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 20 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332506 chr5:76332505 nonsynonymous SNV 0.981 5 hm6A_associated_SNPs_62996 0 0 0 3 76332485 76332507 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr12 95869888 95869888 1 + G A SKCM 95869902 + 95869882 95869922 41 TCAGTGGATGAAGTAGCAAGACAGTTGGAAAGATCAGCATT TCAGTGAATGAAGTAGCAAGACAGTTGGAAAGATCAGCATT < 41bp 1 0.746180016775805 1 0.882250428199768 experiment 0.50763996644839 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 7 METAP2 ENSG00000111142 CDS Human protein_coding chr12:95869902 chr12:95869888 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_63006 0 0 1 1 95869886 95869904 mRNA hsa-miR-431 METAP2 miRanda miRanda
14034 chr1 82456514 82456514 1 + G A SKCM 82456495 + 82456475 82456515 41 AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTAA < 41bp 1 0.771047770788159 1 0.999317705631256 experiment 0.457904458423682 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 40 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456495 chr1:82456514 synonymous SNV . 0 hm6A_associated_SNPs_63092 0 0 1 1 82456495 82456517 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr4 4304184 4304184 1 + C T SKCM 4304187 + 4304167 4304207 41 TGCACAGAACTGCCTTTCAAACAGCCAAATTACTATTACAA TGCACAGAACTGCCTTTTAAACAGCCAAATTACTATTACAA < 41bp 1 0.754368128496807 1 0.987549126148224 experiment 0.491263743006386 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 18 ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4304187 chr4:4304184 nonsynonymous SNV . 0 hm6A_associated_SNPs_63098 0 0 0 1 4304166 4304186 mRNA hsa-miR-488 ZBTB49 miRanda miRanda
14034 chr1 93300417 93300417 1 + G A SKCM 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTAGCCTGACAAATTATGCTGCAGCATAT < 41bp 1 0.690368179031306 1 0.0614284873008728 experiment 0.619263641937388 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300417 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_63150 0 0 1 2 93300412 93300437 mRNA hsa-miR-103 RPL5 miRanda miRanda
14034 chr1 93300417 93300417 1 + G A SKCM 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTAGCCTGACAAATTATGCTGCAGCATAT < 41bp 1 0.690368179031306 1 0.0614284873008728 experiment 0.619263641937388 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300417 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_63150 0 0 1 2 93300412 93300437 mRNA hsa-miR-107 RPL5 miRanda miRanda
14034 chr1 93300418 93300418 1 + G A SKCM 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTGACCTGACAAATTATGCTGCAGCATAT < 41bp 1 0.681196056593365 1 0.207541823387146 experiment 0.637607886813271 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300418 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_63151 0 0 1 2 93300412 93300437 mRNA hsa-miR-103 RPL5 miRanda miRanda
14034 chr1 93300418 93300418 1 + G A SKCM 93300423 + 93300403 93300443 41 ATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATAT ATGGTGTGAAGGTTGACCTGACAAATTATGCTGCAGCATAT < 41bp 1 0.681196056593365 1 0.207541823387146 experiment 0.637607886813271 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300423 chr1:93300418 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_63151 0 0 1 2 93300412 93300437 mRNA hsa-miR-107 RPL5 miRanda miRanda
14034 chr5 134229287 134229287 1 + C T SKCM 134229282 + 134229262 134229302 41 CAGTTTGGCCCCTCACTTTAACTCTCTGCCCCGGGCATTTC CAGTTTGGCCCCTCACTTTAACTCTTTGCCCCGGGCATTTC < 41bp 1 0.646845713176422 1 0.0689766705036163 experiment 0.706308573647157 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134229282 chr5:134229287 synonymous SNV . 0 hm6A_associated_SNPs_63154 0 0 1 1 134229280 134229301 mRNA hsa-miR-365 TXNDC15 miRanda miRanda
14034 chr1 145281387 145281387 1 + C T SKCM 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAATGGATCGATGCCTGCCTGTCTCAT Direct Loss 1 0.079549847533218 1 0.0417475700378418 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281387 nonsynonymous SNV 0.993 0 hm6A_associated_SNPs_63169 0 0 1 1 145281387 145281409 mRNA hsa-miR-185 NOTCH2NL miRanda miRanda
14034 chr11 988673 988673 1 + C T SKCM 988660 + 988640 988680 41 AGATGCTGAGCTATCTGGAGACAGCTGACTACTCCATCCGA AGATGCTGAGCTATCTGGAGACAGCTGACTACTTCATCCGA < 41bp 1 0.406781575164937 1 0.926450729370117 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 34 AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988660 chr11:988673 nonsynonymous SNV 0.944 4 hm6A_associated_SNPs_63182 0 0 1 1 988669 988689 mRNA hsa-miR-216b AP2A2 miRanda miRanda
14034 chr2 27280199 27280199 1 + G A SKCM 27280212 + 27280192 27280232 41 CAACACTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC CAACACTAGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC < 41bp 1 0.555614923138299 1 0.0384233593940735 experiment 0.888770153723402 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 8 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280212 chr2:27280199 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_63186 0 0 1 2 27280179 27280201 mRNA hsa-miR-199a-5p AGBL5 miRanda miRanda
14034 chr2 27280199 27280199 1 + G A SKCM 27280212 + 27280192 27280232 41 CAACACTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC CAACACTAGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC < 41bp 1 0.555614923138299 1 0.0384233593940735 experiment 0.888770153723402 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 8 AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280212 chr2:27280199 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_63186 0 0 1 2 27280178 27280201 mRNA hsa-miR-199b-5p AGBL5 miRanda miRanda
14034 chr11 988674 988674 1 + C T SKCM 988660 + 988640 988680 41 AGATGCTGAGCTATCTGGAGACAGCTGACTACTCCATCCGA AGATGCTGAGCTATCTGGAGACAGCTGACTACTCTATCCGA < 41bp 1 0.430345985290866 1 0.898537039756775 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 35 AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988660 chr11:988674 synonymous SNV . 0 hm6A_associated_SNPs_63201 0 0 1 1 988669 988689 mRNA hsa-miR-216b AP2A2 miRanda miRanda
14034 chr2 135888228 135888228 1 + C T SKCM 135888234 + 135888214 135888254 41 GCAAAGAAGAAAATCCGAAAACACAGAGGTGTAGAGGAGTC GCAAAGAAGAAAATTCGAAAACACAGAGGTGTAGAGGAGTC < 41bp 1 0.799988479985821 1 0.0440310537815094 experiment 0.400023040028359 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 15 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135888234 chr2:135888228 synonymous SNV . 0 hm6A_associated_SNPs_63229 0 0 1 1 135888221 135888244 mRNA hsa-miR-10a RAB3GAP1 miRanda miRanda
14034 chr15 34521959 34521959 1 + G A SKCM 34521977 + 34521957 34521997 41 ATGGAGTTCAGTGGTGGAGGACTGCTTTTGTGAACATGAGA ATAGAGTTCAGTGGTGGAGGACTGCTTTTGTGAACATGAGA < 41bp 1 0.588201198830231 1 0.0888558626174927 experiment 0.823597602339537 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521977 chr15:34521959 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_63230 0 0 1 1 34521954 34521963 mRNA hsa-miR-136 TMEM85 miRanda miRanda
14034 chr5 70892176 70892176 1 + A G SKCM 70892173 + 70892153 70892193 41 ATTGCCCAGAGAAAGAATTGACAATCTCATAGACCCAGGGT ATTGCCCAGAGAAAGAATTGACAGTCTCATAGACCCAGGGT < 41bp 1 0.434192715288129 1 0.0548312067985535 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70892173 chr5:70892176 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_63268 0 0 1 2 70892159 70892179 mRNA hsa-miR-219-5p MCCC2 miRanda miRanda
14034 chr5 70892176 70892176 1 + A G SKCM 70892173 + 70892153 70892193 41 ATTGCCCAGAGAAAGAATTGACAATCTCATAGACCCAGGGT ATTGCCCAGAGAAAGAATTGACAGTCTCATAGACCCAGGGT < 41bp 1 0.434192715288129 1 0.0548312067985535 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70892173 chr5:70892176 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_63268 0 0 1 2 70892173 70892191 mRNA hsa-miR-504 MCCC2 miRanda miRanda
14034 chr15 25227215 25227215 1 + C T SKCM 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AAAATTTGAGCTTAAAAATGACACTCTGAAATTCAGTCAGT < 41bp 1 0.236026340845039 1 0.177261531352997 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227215 . . 0 hm6A_associated_SNPs_63276 0 0 1 2 25227198 25227217 mRNA hsa-miR-876-5p PAR-SN miRanda miRanda
14034 chr15 25227215 25227215 1 + C T SKCM 25227203 + 25227183 25227223 41 AAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGT AAAATTTGAGCTTAAAAATGACACTCTGAAATTCAGTCAGT < 41bp 1 0.236026340845039 1 0.177261531352997 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 PWARSN;SNHG14;SNORD107 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25227203 chr15:25227215 . . 0 hm6A_associated_SNPs_63276 0 0 1 2 25227198 25227217 mRNA hsa-miR-876-5p SNRPN miRanda miRanda
14034 chr14 65381170 65381170 1 + C T SKCM 65381190 + 65381170 65381210 41 CTTCCCGGAAGCGTTGGAGGACATTCCCTGTTGACTGCGTC TTTCCCGGAAGCGTTGGAGGACATTCCCTGTTGACTGCGTC < 41bp 1 0.559227138353856 1 0.974610567092896 experiment 0.881545723292288 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31257032;GSE122961;MAZTER-seq;ESC;Control 1 CHURC1;CHURC1-FNTB ENSG00000258289 CDS Human protein_coding chr14:65381190 chr14:65381170 nonsynonymous SNV 0.956 1 hm6A_associated_SNPs_63306 0 0 1 1 65381155 65381175 mRNA hsa-miR-7 LOC100289314 miRanda miRanda
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046479 lncRNA hsa-let-7b-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046479 lncRNA hsa-let-7c-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046476 lncRNA hsa-miR-4500 XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATGAGAACCTTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.171515366579787 1 0.756358981132507 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046475 . . 0 hm6A_associated_SNPs_63332 0 0 1 11 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046479 lncRNA hsa-let-7b-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046479 lncRNA hsa-let-7c-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046480 lncRNA hsa-let-7d-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046481 lncRNA hsa-let-7e-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046481 lncRNA hsa-let-7f-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046481 lncRNA hsa-let-7g-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046481 lncRNA hsa-let-7i-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046480 lncRNA hsa-miR-4458 XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046476 lncRNA hsa-miR-4500 XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046475 73046475 1 - G A SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATGAGAACCTTAAACCCTACCTCTTTT < 41bp 1 0.401666012360617 1 0.834491789340973 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046475 . . 0 hm6A_associated_SNPs_63333 0 0 1 11 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chr1 150065671 150065671 1 + C T SKCM 150065668 + 150065648 150065688 41 ATCAACCTTTCCTACATGAAACCCTGGATCATCTCATCAAA ATCAACCTTTCCTACATGAAACCTTGGATCATCTCATCAAA < 41bp 1 0.287917674412066 1 0.00297239422798157 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 24 VPS45 ENSG00000136631 CDS Human protein_coding chr1:150065668 chr1:150065671 synonymous SNV . 0 hm6A_associated_SNPs_63375 0 0 1 1 150065663 150065683 mRNA hsa-miR-143 VPS45 miRanda miRanda
14034 chr20 57478841 57478841 1 + C T SKCM 57478830 + 57478810 57478850 41 GAGTGTGATGAACGTGCCTGACTTTGACTTCCCTCCCGTAA GAGTGTGATGAACGTGCCTGACTTTGACTTCTCTCCCGTAA < 41bp 1 0.27539377694609 1 0.915335476398468 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478830 chr20:57478841 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_63441 0 0 1 2 57478838 57478846 mRNA hsa-miR-376a GNAS miRanda miRanda
14034 chr20 57478841 57478841 1 + C T SKCM 57478830 + 57478810 57478850 41 GAGTGTGATGAACGTGCCTGACTTTGACTTCCCTCCCGTAA GAGTGTGATGAACGTGCCTGACTTTGACTTCTCTCCCGTAA < 41bp 1 0.27539377694609 1 0.915335476398468 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 32 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478830 chr20:57478841 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_63441 0 0 1 2 57478837 57478846 mRNA hsa-miR-376b GNAS miRanda miRanda
14034 chr20 57478841 57478841 1 + C T SKCM 57478836 + 57478816 57478856 41 GATGAACGTGCCTGACTTTGACTTCCCTCCCGTAAGCTACA GATGAACGTGCCTGACTTTGACTTCTCTCCCGTAAGCTACA < 41bp 1 0.105239368855017 1 0.850480496883392 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478836 chr20:57478841 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_63442 0 0 1 2 57478838 57478846 mRNA hsa-miR-376a GNAS miRanda miRanda
14034 chr20 57478841 57478841 1 + C T SKCM 57478836 + 57478816 57478856 41 GATGAACGTGCCTGACTTTGACTTCCCTCCCGTAAGCTACA GATGAACGTGCCTGACTTTGACTTCTCTCCCGTAAGCTACA < 41bp 1 0.105239368855017 1 0.850480496883392 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 GNAS ENSG00000087460 CDS Human protein_coding chr20:57478836 chr20:57478841 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_63442 0 0 1 2 57478837 57478846 mRNA hsa-miR-376b GNAS miRanda miRanda
14034 chr4 175224908 175224908 1 + C T SKCM 175224890 + 175224870 175224910 41 TTAATTATAAACCAATTTTGACAAAAAAGCAGTTTATCCAA TTAATTATAAACCAATTTTGACAAAAAAGCAGTTTATCTAA < 41bp 1 0.671318462527923 1 0.639368295669556 experiment 0.657363074944155 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 CEP44 ENSG00000164118 CDS Human protein_coding chr4:175224890 chr4:175224908 stopgain 0.996 1 hm6A_associated_SNPs_63474 0 0 1 1 175224906 175224926 mRNA hsa-miR-544 KIAA1712 miRanda miRanda
14034 chrX 73040873 73040873 1 - G A SKCM 73040886 - 73040866 73040906 41 AAAATGGAAAGAAGAAAGTAACTAAAAGCCTTCCTTTCACA AAAATGGAAAGAAGAAAGTAACTAAAAGCCTTCTTTTCACA < 41bp 1 0.218303663572288 1 0.57053530216217 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control 34 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040886 chrX:73040873 . . 0 hm6A_associated_SNPs_63477 0 0 1 1 73040867 73040887 lncRNA hsa-miR-488-3p XIST miRanda starBase2
14034 chrX 73046521 73046521 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GAAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG < 41bp 1 0.336493433250113 1 0.807168126106262 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046521 . . 0 hm6A_associated_SNPs_63535 0 0 1 3 73046519 73046540 lncRNA hsa-miR-1343-3p XIST miRanda starBase2
14034 chrX 73046521 73046521 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GAAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG < 41bp 1 0.336493433250113 1 0.807168126106262 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046521 . . 0 hm6A_associated_SNPs_63535 0 0 1 3 73046519 73046539 lncRNA hsa-miR-6783-3p XIST miRanda starBase2
14034 chrX 73046521 73046521 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GAAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG < 41bp 1 0.336493433250113 1 0.807168126106262 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046521 . . 0 hm6A_associated_SNPs_63535 0 0 1 3 73046503 73046525 lncRNA hsa-miR-498 XIST miRanda starBase2
14034 chrX 73046521 73046521 1 - C T SKCM 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGCCCATGACCCAGAACCCAGAAAGGATAGAAGCTT < 41bp 1 0.200126965982331 1 0.922255873680115 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046521 . . 0 hm6A_associated_SNPs_63536 0 0 1 3 73046519 73046540 lncRNA hsa-miR-1343-3p XIST miRanda starBase2
14034 chrX 73046521 73046521 1 - C T SKCM 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGCCCATGACCCAGAACCCAGAAAGGATAGAAGCTT < 41bp 1 0.200126965982331 1 0.922255873680115 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046521 . . 0 hm6A_associated_SNPs_63536 0 0 1 3 73046519 73046539 lncRNA hsa-miR-6783-3p XIST miRanda starBase2
14034 chrX 73046521 73046521 1 - C T SKCM 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGCCCATGACCCAGAACCCAGAAAGGATAGAAGCTT < 41bp 1 0.200126965982331 1 0.922255873680115 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046521 . . 0 hm6A_associated_SNPs_63536 0 0 1 3 73046503 73046525 lncRNA hsa-miR-498 XIST miRanda starBase2
14034 chrX 73046780 73046780 1 - C T SKCM 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCGAAGACCTGAGTTGGATG < 41bp 1 0.512030278418881 1 0.738040685653687 experiment 0.975939443162237 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046780 . . 0 hm6A_associated_SNPs_63568 0 0 1 3 73046776 73046796 lncRNA hsa-miR-1245b-5p XIST miRanda starBase2
14034 chrX 73046780 73046780 1 - C T SKCM 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCGAAGACCTGAGTTGGATG < 41bp 1 0.512030278418881 1 0.738040685653687 experiment 0.975939443162237 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046780 . . 0 hm6A_associated_SNPs_63568 0 0 1 3 73046776 73046797 lncRNA hsa-miR-3142 XIST miRanda starBase2
14034 chrX 73046780 73046780 1 - C T SKCM 73046787 - 73046767 73046807 41 CAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATG CAGAGGGTGGCCTGAATTGGACCGAAGACCTGAGTTGGATG < 41bp 1 0.512030278418881 1 0.738040685653687 experiment 0.975939443162237 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046787 chrX:73046780 . . 0 hm6A_associated_SNPs_63568 0 0 1 3 73046772 73046795 lncRNA hsa-miR-510-5p XIST miRanda starBase2
14034 chr12 53853075 53853075 1 + C T SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTCTATGATCAATAGCACAGCTGCCAGT Direct Loss 1 0.263774965308103 1 0.103850096464157 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853075 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_63631 0 0 1 6 53853071 53853092 mRNA hsa-miR-34a PCBP2 miRanda miRanda
14034 chr12 53853075 53853075 1 + C T SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTCTATGATCAATAGCACAGCTGCCAGT Direct Loss 1 0.263774965308103 1 0.103850096464157 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853075 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_63631 0 0 1 6 53853059 53853082 mRNA hsa-miR-9 PCBP2 miRanda miRanda
14034 chr12 53853075 53853075 1 + C T SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTCTATGATCAATAGCACAGCTGCCAGT Direct Loss 1 0.263774965308103 1 0.103850096464157 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853075 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_63631 0 0 1 6 53853056 53853075 mRNA hsa-miR-376a PCBP2 miRanda miRanda
14034 chr12 53853075 53853075 1 + C T SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTCTATGATCAATAGCACAGCTGCCAGT Direct Loss 1 0.263774965308103 1 0.103850096464157 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853075 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_63631 0 0 1 6 53853070 53853092 mRNA hsa-miR-449a PCBP2 miRanda miRanda
14034 chr12 53853075 53853075 1 + C T SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTCTATGATCAATAGCACAGCTGCCAGT Direct Loss 1 0.263774965308103 1 0.103850096464157 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853075 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_63631 0 0 1 6 53853056 53853075 mRNA hsa-miR-376b PCBP2 miRanda miRanda
14034 chr12 53853075 53853075 1 + C T SKCM 53853074 + 53853054 53853094 41 AGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGT AGGACATAAGCAGCTCTATGATCAATAGCACAGCTGCCAGT Direct Loss 1 0.263774965308103 1 0.103850096464157 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 22 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853074 chr12:53853075 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_63631 0 0 1 6 53853070 53853092 mRNA hsa-miR-449b PCBP2 miRanda miRanda
14034 chr17 57270872 57270872 1 + C T SKCM 57270892 + 57270872 57270912 41 CCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAA TCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAA < 41bp 1 0.359711441742799 1 0.0592442154884338 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270892 chr17:57270872 nonsynonymous SNV 0.864 0 hm6A_associated_SNPs_63643 0 0 1 1 57270856 57270879 mRNA hsa-miR-184 PRR11 miRanda miRanda
14034 chr9 98643498 98643498 1 + C T SKCM 98643495 + 98643475 98643515 41 GAGACTACCAAAGAGAAGGAACCCGGTTTCTTTATGGACAC GAGACTACCAAAGAGAAGGAACCTGGTTTCTTTATGGACAC < 41bp 1 0.775909560599236 1 0.97065806388855 experiment 0.448180878801528 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98643495 chr9:98643498 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_63723 0 0 1 1 98643498 98643519 mRNA hsa-miR-142-3p C9orf102 miRanda miRanda
14034 chrX 23803853 23803853 1 + G A SKCM 23803859 + 23803839 23803879 41 TTGGTAGCAGAATGGAATGAACCATCCATCAACTTCTATAA TTGGTAGCAGAATGAAATGAACCATCCATCAACTTCTATAA < 41bp 1 0.678007744855419 1 0.883020639419556 experiment 0.643984510289163 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 15 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803859 chrX:23803853 stopgain 1.000 1 hm6A_associated_SNPs_63727 0 0 1 1 23803852 23803874 mRNA hsa-miR-382 SAT1 miRanda miRanda
14034 chr2 71592656 71592656 1 + A T SKCM 71592650 + 71592630 71592670 41 CTTGAAGCTGCTGATAAGGGACATTCACCAGCACAAAAGCC CTTGAAGCTGCTGATAAGGGACATTCTCCAGCACAAAAGCC < 41bp 1 0.770879552407255 1 0.953140735626221 experiment 0.458240895185489 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 27 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592650 chr2:71592656 synonymous SNV . 0 hm6A_associated_SNPs_63732 0 0 1 1 71592636 71592662 mRNA hsa-miR-138 ZNF638 miRanda miRanda
14034 chr2 71592657 71592657 1 + C T SKCM 71592650 + 71592630 71592670 41 CTTGAAGCTGCTGATAAGGGACATTCACCAGCACAAAAGCC CTTGAAGCTGCTGATAAGGGACATTCATCAGCACAAAAGCC < 41bp 1 0.763583500263404 1 0.963299632072449 experiment 0.472832999473193 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 28 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592650 chr2:71592657 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_63734 0 0 1 1 71592636 71592662 mRNA hsa-miR-138 ZNF638 miRanda miRanda
14034 chr1 233802629 233802629 1 + C T SKCM 233802611 + 233802591 233802631 41 CTTCTCAGTCCTGGAGGATGACTGGAACTTCCTGGAATCCT CTTCTCAGTCCTGGAGGATGACTGGAACTTCCTGGAATTCT < 41bp 1 0.608184877927451 1 0.590935409069061 experiment 0.783630244145098 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802611 chr1:233802629 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_63787 0 0 1 1 233802623 233802644 mRNA hsa-miR-495 KCNK1 miRanda miRanda
14034 chr1 233802629 233802629 1 + C T SKCM 233802617 + 233802597 233802637 41 AGTCCTGGAGGATGACTGGAACTTCCTGGAATCCTTTTATT AGTCCTGGAGGATGACTGGAACTTCCTGGAATTCTTTTATT < 41bp 1 0.604925063765858 1 0.711920380592346 experiment 0.790149872468284 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802617 chr1:233802629 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_63788 0 0 1 1 233802623 233802644 mRNA hsa-miR-495 KCNK1 miRanda miRanda
14034 chr19 7707209 7707209 1 + G A SKCM 7707198 + 7707178 7707218 41 CATGGCGTATGATCTGCTGGACATAGAGCAGGACACATACA CATGGCGTATGATCTGCTGGACATAGAGCAGAACACATACA < 41bp 1 0.754520352386026 1 0.982812404632568 experiment 0.490959295227948 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 32 STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7707198 chr19:7707209 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_63834 0 0 1 1 7707197 7707218 mRNA hsa-miR-142-3p STXBP2 miRanda miRanda
14034 chr8 15398068 15398068 1 + G A SKCM 15398062 + 15398042 15398082 41 TGCATCCAGCTCGGGGGAGGACAGAAGAAAAAGGAGGTAGA TGCATCCAGCTCGGGGGAGGACAGAAAAAAAAGGAGGTAGA < 41bp 1 0.313871403085588 1 0.821162223815918 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 27 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15398062 chr8:15398068 synonymous SNV . 0 hm6A_associated_SNPs_63887 0 0 1 1 15398057 15398077 mRNA hsa-miR-211 TUSC3 miRanda miRanda
14034 chr12 53854884 53854884 1 + C T SKCM 53854903 + 53854883 53854923 41 TCCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTT TTCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTT < 41bp 1 0.633347924854558 1 0.0710345506668091 experiment 0.733304150290883 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 2 PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53854903 chr12:53854884 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_63901 0 0 1 1 53854881 53854903 mRNA hsa-miR-425 PCBP2 miRanda miRanda
14034 chr5 76331408 76331408 1 + A C SKCM 76331421 + 76331401 76331441 41 CTTCCAAATAAAGTGACTGAACTGTCAGATCAACAAGATCA CTTCCAACTAAAGTGACTGAACTGTCAGATCAACAAGATCA < 41bp 1 0.372324552013795 1 0.99685525894165 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331421 chr5:76331408 nonsynonymous SNV 0.969 0 hm6A_associated_SNPs_63967 0 0 1 1 76331402 76331426 mRNA hsa-miR-181b AGGF1 miRanda miRanda
14034 chr16 2258788 2258788 1 + G A SKCM 2258769 + 2258749 2258789 41 TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTGGT TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTGAT < 41bp 1 0.767287138802729 1 0.985449969768524 experiment 0.465425722394543 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258769 chr16:2258788 stopgain 1.000 0 hm6A_associated_SNPs_64024 0 0 1 2 2258773 2258794 mRNA hsa-miR-362-3p MLST8 miRanda miRanda
14034 chr16 2258788 2258788 1 + G A SKCM 2258769 + 2258749 2258789 41 TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTGGT TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTGAT < 41bp 1 0.767287138802729 1 0.985449969768524 experiment 0.465425722394543 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258769 chr16:2258788 stopgain 1.000 0 hm6A_associated_SNPs_64024 0 0 1 2 2258773 2258794 mRNA hsa-miR-329 MLST8 miRanda miRanda
14034 chr16 2258788 2258788 1 + G A SKCM 2258798 + 2258778 2258818 41 CCCGGCTCTGGTGTGTGGAGACTGGAGAGATCAAGAGAGAG CCCGGCTCTGATGTGTGGAGACTGGAGAGATCAAGAGAGAG < 41bp 1 0.761875588365199 1 0.987335324287415 experiment 0.476248823269603 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258798 chr16:2258788 stopgain 1.000 0 hm6A_associated_SNPs_64025 0 0 1 2 2258773 2258794 mRNA hsa-miR-362-3p MLST8 miRanda miRanda
14034 chr16 2258788 2258788 1 + G A SKCM 2258798 + 2258778 2258818 41 CCCGGCTCTGGTGTGTGGAGACTGGAGAGATCAAGAGAGAG CCCGGCTCTGATGTGTGGAGACTGGAGAGATCAAGAGAGAG < 41bp 1 0.761875588365199 1 0.987335324287415 experiment 0.476248823269603 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258798 chr16:2258788 stopgain 1.000 0 hm6A_associated_SNPs_64025 0 0 1 2 2258773 2258794 mRNA hsa-miR-329 MLST8 miRanda miRanda
14034 chr16 2258787 2258787 1 + G A SKCM 2258769 + 2258749 2258789 41 TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTGGT TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTAGT < 41bp 1 0.774783481080036 1 0.98187655210495 experiment 0.450433037839927 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258769 chr16:2258787 stopgain 0.999 0 hm6A_associated_SNPs_64041 0 0 1 2 2258773 2258794 mRNA hsa-miR-362-3p MLST8 miRanda miRanda
14034 chr16 2258787 2258787 1 + G A SKCM 2258769 + 2258749 2258789 41 TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTGGT TCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCTCTAGT < 41bp 1 0.774783481080036 1 0.98187655210495 experiment 0.450433037839927 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258769 chr16:2258787 stopgain 0.999 0 hm6A_associated_SNPs_64041 0 0 1 2 2258773 2258794 mRNA hsa-miR-329 MLST8 miRanda miRanda
14034 chr16 2258787 2258787 1 + G A SKCM 2258798 + 2258778 2258818 41 CCCGGCTCTGGTGTGTGGAGACTGGAGAGATCAAGAGAGAG CCCGGCTCTAGTGTGTGGAGACTGGAGAGATCAAGAGAGAG < 41bp 1 0.759118195350938 1 0.983907461166382 experiment 0.481763609298124 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258798 chr16:2258787 stopgain 0.999 0 hm6A_associated_SNPs_64042 0 0 1 2 2258773 2258794 mRNA hsa-miR-362-3p MLST8 miRanda miRanda
14034 chr16 2258787 2258787 1 + G A SKCM 2258798 + 2258778 2258818 41 CCCGGCTCTGGTGTGTGGAGACTGGAGAGATCAAGAGAGAG CCCGGCTCTAGTGTGTGGAGACTGGAGAGATCAAGAGAGAG < 41bp 1 0.759118195350938 1 0.983907461166382 experiment 0.481763609298124 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258798 chr16:2258787 stopgain 0.999 0 hm6A_associated_SNPs_64042 0 0 1 2 2258773 2258794 mRNA hsa-miR-329 MLST8 miRanda miRanda
14034 chr5 72798383 72798383 1 + C T SKCM 72798372 + 72798352 72798392 41 GCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA GCCACAGCAGATGACAAAAAACTTCAGTTCTTCTTAAAGAA < 41bp 1 0.453667517144651 1 0.53984272480011 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798372 chr5:72798383 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_64071 0 0 1 2 72798363 72798384 mRNA hsa-miR-146a BTF3 miRanda miRanda
14034 chr5 72798383 72798383 1 + C T SKCM 72798372 + 72798352 72798392 41 GCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA GCCACAGCAGATGACAAAAAACTTCAGTTCTTCTTAAAGAA < 41bp 1 0.453667517144651 1 0.53984272480011 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798372 chr5:72798383 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_64071 0 0 1 2 72798363 72798384 mRNA hsa-miR-146b-5p BTF3 miRanda miRanda
14034 chr19 1278918 1278918 1 + G A SKCM 1278932 + 1278912 1278952 41 ACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT ACCCGAAAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT < 41bp 1 0.791526746324288 1 0.889124870300293 experiment 0.416946507351424 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278932 chr19:1278918 nonsynonymous SNV 0.004 0 hm6A_associated_SNPs_64078 0 0 1 2 1278905 1278926 mRNA hsa-miR-28-5p C19orf24 miRanda miRanda
14034 chr19 1278918 1278918 1 + G A SKCM 1278932 + 1278912 1278952 41 ACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT ACCCGAAAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT < 41bp 1 0.791526746324288 1 0.889124870300293 experiment 0.416946507351424 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 7 C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278932 chr19:1278918 nonsynonymous SNV 0.004 0 hm6A_associated_SNPs_64078 0 0 1 2 1278904 1278926 mRNA hsa-miR-708 C19orf24 miRanda miRanda
14034 chr17 57262837 57262837 1 + C T SKCM 57262820 + 57262800 57262840 41 GAGTTTAGAAGTATTGAAAGACACCATCTTTCCATCTCGTA GAGTTTAGAAGTATTGAAAGACACCATCTTTCCATCTTGTA < 41bp 1 0.584439591109769 1 0.012663722038269 experiment 0.831120817780463 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 38 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57262820 chr17:57262837 nonsynonymous SNV 0.954 1 hm6A_associated_SNPs_64082 0 0 1 1 57262818 57262838 mRNA hsa-miR-143 PRR11 miRanda miRanda
14034 chrX 73041824 73041824 1 - G A SKCM 73041830 - 73041810 73041850 41 TAAATAGATCTCTTTCAGAAACAATCCTCAGATAACGCATA TAAATAGATCTCTTTCAGAAACAATCTTCAGATAACGCATA < 41bp 1 0.360318651003693 1 0.0611035823822021 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 27 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041830 chrX:73041824 . . 0 hm6A_associated_SNPs_64090 0 0 1 1 73041817 73041838 lncRNA hsa-miR-3200-5p XIST miRanda starBase2
14034 chr19 4944405 4944405 1 + C T SKCM 4944414 + 4944394 4944434 41 GTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGT GTCCCGTCCAATCACTACGGACCCATCCCGGGGATCCCCGT < 41bp 1 0.139534646482845 1 0.958635807037354 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944414 chr19:4944405 . . 0 hm6A_associated_SNPs_64097 0 0 1 2 4944389 4944410 mRNA hsa-miR-140-5p UHRF1 miRanda miRanda
14034 chr19 4944405 4944405 1 + C T SKCM 4944414 + 4944394 4944434 41 GTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGT GTCCCGTCCAATCACTACGGACCCATCCCGGGGATCCCCGT < 41bp 1 0.139534646482845 1 0.958635807037354 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944414 chr19:4944405 . . 0 hm6A_associated_SNPs_64097 0 0 1 2 4944389 4944410 mRNA hsa-miR-296-3p UHRF1 miRanda miRanda
14034 chrX 149809808 149809808 1 + C T SKCM 149809800 + 149809780 149809820 41 TAAGTGCTATGAGCTCTGTGACACTTACCCTGCTCTTTTGG TAAGTGCTATGAGCTCTGTGACACTTACTCTGCTCTTTTGG < 41bp 1 0.542942942679299 1 0.817060470581055 experiment 0.914114114641402 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149809800 chrX:149809808 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_64143 0 0 0 1 149809785 149809808 mRNA hsa-miR-142-3p MTM1 miRanda miRanda
14034 chrX 73046482 73046482 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATAAGAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170861713462728 1 0.686712741851807 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046482 . . 0 hm6A_associated_SNPs_64151 0 0 1 2 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046482 73046482 1 - C T SKCM 73046471 - 73046451 73046491 41 TCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGT TCCCAAGATAAGAACCCTAAACCCTACCTCTTTTCTATTGT < 41bp 1 0.170861713462728 1 0.686712741851807 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046471 chrX:73046482 . . 0 hm6A_associated_SNPs_64151 0 0 1 2 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chrX 73046482 73046482 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATAAGAACCCTAAACCCTACCTCTTTT < 41bp 1 0.393127392444699 1 0.774962186813354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046482 . . 0 hm6A_associated_SNPs_64152 0 0 1 2 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046482 73046482 1 - C T SKCM 73046478 - 73046458 73046498 41 GGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTT GGGGAAATCCCAAGATAAGAACCCTAAACCCTACCTCTTTT < 41bp 1 0.393127392444699 1 0.774962186813354 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HEK293T;Heat_shock 17 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046478 chrX:73046482 . . 0 hm6A_associated_SNPs_64152 0 0 1 2 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chrX 73046482 73046482 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATA < 41bp 1 0.353624758991723 1 0.713667511940002 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046482 . . 0 hm6A_associated_SNPs_64153 0 0 1 2 73046461 73046482 lncRNA hsa-miR-98-5p XIST miRanda starBase2
14034 chrX 73046482 73046482 1 - C T SKCM 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATA < 41bp 1 0.353624758991723 1 0.713667511940002 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 41 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046482 . . 0 hm6A_associated_SNPs_64153 0 0 1 2 73046467 73046487 lncRNA hsa-miR-629-5p XIST miRanda starBase2
14034 chr20 21142942 21142942 1 + G A SKCM 21142925 + 21142905 21142945 41 GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGA GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACAGGA < 41bp 1 0.331453582722625 1 0.818302392959595 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142925 chr20:21142942 . 0.348 0 hm6A_associated_SNPs_64158 0 0 1 3 21142942 21142960 mRNA hsa-miR-378 PLK1S1 miRanda miRanda
14034 chr20 21142942 21142942 1 + G A SKCM 21142925 + 21142905 21142945 41 GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGA GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACAGGA < 41bp 1 0.331453582722625 1 0.818302392959595 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142925 chr20:21142942 . 0.348 0 hm6A_associated_SNPs_64158 0 0 1 3 21142942 21142962 mRNA hsa-miR-330-5p PLK1S1 miRanda miRanda
14034 chr20 21142942 21142942 1 + G A SKCM 21142925 + 21142905 21142945 41 GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGA GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACAGGA < 41bp 1 0.331453582722625 1 0.818302392959595 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142925 chr20:21142942 . 0.348 0 hm6A_associated_SNPs_64158 0 0 1 3 21142939 21142960 mRNA hsa-miR-422a PLK1S1 miRanda miRanda
14034 chr3 12458381 12458381 1 + G A SKCM 12458396 + 12458376 12458416 41 TCCTGGTTTTGTAAATCTTGACTTGAACGACCAAGTAACTC TCCTGATTTTGTAAATCTTGACTTGAACGACCAAGTAACTC < 41bp 1 0.560080870836636 1 0.942274272441864 experiment 0.879838258326728 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458396 chr3:12458381 nonsynonymous SNV 0.988 5 hm6A_associated_SNPs_64161 0 0 0 2 12458381 12458402 mRNA hsa-miR-26a PPARG miRanda miRanda
14034 chr3 12458381 12458381 1 + G A SKCM 12458396 + 12458376 12458416 41 TCCTGGTTTTGTAAATCTTGACTTGAACGACCAAGTAACTC TCCTGATTTTGTAAATCTTGACTTGAACGACCAAGTAACTC < 41bp 1 0.560080870836636 1 0.942274272441864 experiment 0.879838258326728 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458396 chr3:12458381 nonsynonymous SNV 0.988 5 hm6A_associated_SNPs_64161 0 0 0 2 12458380 12458400 mRNA hsa-miR-224 PPARG miRanda miRanda
14034 chr11 34474670 34474670 1 + C T SKCM 34474676 + 34474656 34474696 41 GCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGAC GCCAAAAGAGAAATTCTCAGACACATCTGAAGGATCCGGAC < 41bp 1 0.678186976420701 1 0.0481236577033997 experiment 0.643626047158599 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 CAT ENSG00000121691 CDS Human protein_coding chr11:34474676 chr11:34474670 nonsynonymous SNV 0.982 3 hm6A_associated_SNPs_64163 0 0 1 1 34474651 34474672 mRNA hsa-miR-876-5p CAT miRanda miRanda
14034 chr15 25213170 25213170 1 + C T SKCM 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACATCAAGAGGTGGTTAAAGC < 41bp 1 0.359113359817891 1 0.0963722169399261 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213170 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_64170 0 0 0 2 25213167 25213191 mRNA hsa-miR-135a SNRPN miRanda miRanda
14034 chr15 25213170 25213170 1 + C T SKCM 25213167 + 25213147 25213187 41 GGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGC GGCAGGCATTCTTAGCTGAGACATCAAGAGGTGGTTAAAGC < 41bp 1 0.359113359817891 1 0.0963722169399261 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213167 chr15:25213170 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_64170 0 0 0 2 25213167 25213191 mRNA hsa-miR-135b SNRPN miRanda miRanda
14034 chrX 73046538 73046538 1 - G T SKCM 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGCCAATGACCCAGAACCCAGGAAGGATAGAAGCTT < 41bp 1 0.201946160812836 1 0.922484159469604 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046538 . . 0 hm6A_associated_SNPs_64208 0 0 1 2 73046519 73046540 lncRNA hsa-miR-1343-3p XIST miRanda starBase2
14034 chrX 73046538 73046538 1 - G T SKCM 73046527 - 73046507 73046547 41 CTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTT CTGGAGGCCAATGACCCAGAACCCAGGAAGGATAGAAGCTT < 41bp 1 0.201946160812836 1 0.922484159469604 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 10 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046527 chrX:73046538 . . 0 hm6A_associated_SNPs_64208 0 0 1 2 73046519 73046539 lncRNA hsa-miR-6783-3p XIST miRanda starBase2
14034 chr20 3899433 3899433 1 + C A SKCM 3899437 + 3899417 3899457 41 TTGAAAGCACTTTTTTCGGAACACGAGGTAAGCTGACTTGT TTGAAAGCACTTTTTTAGGAACACGAGGTAAGCTGACTTGT < 41bp 1 0.603556855566572 1 0.0108797252178192 experiment 0.792886288866856 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 PANK2 ENSG00000125779 CDS Human protein_coding chr20:3899437 chr20:3899433 stopgain 0.990 1 hm6A_associated_SNPs_64210 0 0 1 1 3899425 3899443 mRNA hsa-miR-10a PANK2 miRanda miRanda
14034 chr2 173457749 173457749 1 + C T STAD 173457753 + 173457733 173457773 41 ATTCCCTAGAGGGTTACGGGACAGATGCAGTTATCTACATT ATTCCCTAGAGGGTTATGGGACAGATGCAGTTATCTACATT < 41bp 1 0.463504403232367 1 0.810464560985565 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 17 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173457753 chr2:173457749 synonymous SNV . 0 hm6A_associated_SNPs_64296 0 0 1 1 173457742 173457764 mRNA hsa-miR-217 PDK1 miRanda miRanda
14034 chr22 21272475 21272475 1 + C T STAD 21272458 + 21272438 21272478 41 GATCGGGGACCAGGAATTTGACCATTTGCCGGCCCTGCTGG GATCGGGGACCAGGAATTTGACCATTTGCCGGCCCTGTTGG < 41bp 1 0.649842566656696 1 0.985865235328674 experiment 0.700314866686609 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 CRKL ENSG00000099942 CDS Human protein_coding chr22:21272458 chr22:21272475 synonymous SNV . 0 hm6A_associated_SNPs_64322 0 0 1 1 21272458 21272478 mRNA hsa-miR-214 CRKL miRanda miRanda
14034 chr1 162773258 162773258 1 + T C STAD 162773269 + 162773249 162773289 41 GTACAGCATTGACCAATTTGACATATGGAATTCTGCCTCCG GTACAGCATCGACCAATTTGACATATGGAATTCTGCCTCCG < 41bp 1 0.71409626412135 1 0.678227961063385 experiment 0.571807471757301 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162773269 chr1:162773258 nonsynonymous SNV 0.057 1 hm6A_associated_SNPs_64334 0 0 0 1 162773240 162773265 mRNA hsa-miR-182 HSD17B7 miRanda miRanda
14034 chr10 74644061 74644061 1 + T C STAD 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCAGAGACAGACAATACTCACTATTTTTCCA < 41bp 1 0.692358036617691 1 0.0849453806877136 experiment 0.615283926764618 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644061 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_64386 0 0 1 1 74644041 74644062 mRNA hsa-miR-496 CCDC109A miRanda miRanda
14034 chr10 17275857 17275857 1 + G A STAD 17275839 + 17275819 17275859 41 TGTGGATGTTTCCAAGCCTGACCTCACGGCTGCCCTGCGTG TGTGGATGTTTCCAAGCCTGACCTCACGGCTGCCCTGCATG < 41bp 1 0.129500199652902 1 0.846889495849609 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 39 VIM ENSG00000026025 CDS Human protein_coding chr10:17275839 chr10:17275857 nonsynonymous SNV 0.814 3 hm6A_associated_SNPs_64392 0 0 1 1 17275853 17275876 mRNA hsa-miR-137 VIM miRanda miRanda
14034 chr8 42940419 42940419 1 + G T STAD 42940425 + 42940405 42940445 41 CCAACAAATGTACAGCAATAACACCATCCAGAAGAACTTGA CCAACAAATGTACATCAATAACACCATCCAGAAGAACTTGA < 41bp 1 0.766164749404428 1 0.911525785923004 experiment 0.467670501191144 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 15 FNTA ENSG00000168522 CDS Human protein_coding chr8:42940425 chr8:42940419 nonsynonymous SNV 0.591 3 hm6A_associated_SNPs_64425 0 0 0 1 42940403 42940425 mRNA hsa-miR-137 FNTA miRanda miRanda
14034 chr3 9712789 9712789 1 + A C STAD 9712773 + 9712753 9712793 41 TGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACC TGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGCTACC < 41bp 1 0.675236510644757 1 0.0207421779632568 experiment 0.649526978710486 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 37 MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9712773 chr3:9712789 nonsynonymous SNV . 0 hm6A_associated_SNPs_64438 0 0 1 1 9712781 9712804 mRNA hsa-miR-134 MTMR14 miRanda miRanda
14034 chr6 31636327 31636327 1 + G T STAD 31636331 + 31636311 31636351 41 TTCAGATGAAGAACTGGAAGACAACCCCAACCAGAGTGACC TTCAGATGAAGAACTGTAAGACAACCCCAACCAGAGTGACC < 41bp 1 0.640251315637148 1 0.504409611225128 experiment 0.719497368725704 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 17 CSNK2B ENSG00000204435;ENSG00000263020 CDS Human other chr6:31636331 chr6:31636327 stopgain 1.000 1 hm6A_associated_SNPs_64444 0 0 1 1 31636305 31636329 mRNA hsa-miR-145 CSNK2B miRanda miRanda
14034 chr14 69925158 69925158 1 + G A STAD 69925143 + 69925123 69925163 41 CCATGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCACA CCATGCTTTTCTCTGCCGGGACATTTCTTTATGTTACCACA < 41bp 1 0.78739287989492 1 0.144277483224869 experiment 0.42521424021016 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69925143 chr14:69925158 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_64501 0 0 1 1 69925151 69925172 mRNA hsa-miR-101 SLC39A9 miRanda miRanda
14034 chrX 114877715 114877715 1 + A G STAD 114877729 + 114877709 114877749 41 GTTGTCAGTGGAAACCCCAAACTCAACTTAGCTTTCGTGGC GTTGTCGGTGGAAACCCCAAACTCAACTTAGCTTTCGTGGC < 41bp 1 0.1077191414071 1 0.257402867078781 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 7 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114877729 chrX:114877715 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_64506 0 0 1 1 114877691 114877715 mRNA hsa-miR-494 PLS3 miRanda miRanda
14034 chr15 52194210 52194210 1 + C T STAD 52194222 + 52194202 52194242 41 AGCTAATGCTATAACAAAAAACAATGACTTAGGTAAGACAT AGCTAATGTTATAACAAAAAACAATGACTTAGGTAAGACAT < 41bp 1 0.46586063053001 1 0.100969761610031 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 TMOD3 ENSG00000138594 CDS Human protein_coding chr15:52194222 chr15:52194210 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_64572 0 0 1 1 52194202 52194222 mRNA hsa-miR-129-5p TMOD3 miRanda miRanda
14034 chr1 33292032 33292032 1 + C A STAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCATGACCTCTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.752266512203027 1 0.987225294113159 experiment 0.495466975593947 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292032 nonsynonymous SNV 0.437 2 hm6A_associated_SNPs_64583 0 0 1 7 33292029 33292053 mRNA hsa-let-7b S100PBP miRanda miRanda
14034 chr1 33292032 33292032 1 + C A STAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCATGACCTCTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.752266512203027 1 0.987225294113159 experiment 0.495466975593947 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292032 nonsynonymous SNV 0.437 2 hm6A_associated_SNPs_64583 0 0 1 7 33292030 33292053 mRNA hsa-let-7e S100PBP miRanda miRanda
14034 chr1 33292032 33292032 1 + C A STAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCATGACCTCTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.752266512203027 1 0.987225294113159 experiment 0.495466975593947 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292032 nonsynonymous SNV 0.437 2 hm6A_associated_SNPs_64583 0 0 1 7 33292015 33292034 mRNA hsa-miR-28-5p S100PBP miRanda miRanda
14034 chr1 33292032 33292032 1 + C A STAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCATGACCTCTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.752266512203027 1 0.987225294113159 experiment 0.495466975593947 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292032 nonsynonymous SNV 0.437 2 hm6A_associated_SNPs_64583 0 0 1 7 33292029 33292053 mRNA hsa-miR-98 S100PBP miRanda miRanda
14034 chr1 33292032 33292032 1 + C A STAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCATGACCTCTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.752266512203027 1 0.987225294113159 experiment 0.495466975593947 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292032 nonsynonymous SNV 0.437 2 hm6A_associated_SNPs_64583 0 0 1 7 33292031 33292052 mRNA hsa-miR-196a S100PBP miRanda miRanda
14034 chr1 33292032 33292032 1 + C A STAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCATGACCTCTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.752266512203027 1 0.987225294113159 experiment 0.495466975593947 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292032 nonsynonymous SNV 0.437 2 hm6A_associated_SNPs_64583 0 0 1 7 33292032 33292053 mRNA hsa-let-7i S100PBP miRanda miRanda
14034 chr1 33292032 33292032 1 + C A STAD 33292045 + 33292025 33292065 41 GAGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATC GAGACTCATGACCTCTTCAAACTACCTCAGCTAAGTACATC < 41bp 1 0.752266512203027 1 0.987225294113159 experiment 0.495466975593947 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292045 chr1:33292032 nonsynonymous SNV 0.437 2 hm6A_associated_SNPs_64583 0 0 1 7 33292031 33292052 mRNA hsa-miR-196b S100PBP miRanda miRanda
14034 chr16 4700454 4700454 1 + T C STAD 4700447 + 4700427 4700467 41 AGGTTACCTCTTTGGAGAGAACATGGATCTGAACTTCCTGG AGGTTACCTCTTTGGAGAGAACATGGACCTGAACTTCCTGG < 41bp 1 0.664369719640867 1 0.819457650184631 experiment 0.671260560718267 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 28 MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4700447 chr16:4700454 synonymous SNV . 0 hm6A_associated_SNPs_64584 0 0 1 1 4700430 4700454 mRNA hsa-miR-145 MGRN1 miRanda miRanda
14034 chr16 4700454 4700454 1 + T C STAD 4700459 + 4700439 4700479 41 TGGAGAGAACATGGATCTGAACTTCCTGGGCAGCCGCCCGG TGGAGAGAACATGGACCTGAACTTCCTGGGCAGCCGCCCGG < 41bp 1 0.265632933793953 1 0.859306216239929 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 16 MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4700459 chr16:4700454 synonymous SNV . 0 hm6A_associated_SNPs_64585 0 0 1 1 4700430 4700454 mRNA hsa-miR-145 MGRN1 miRanda miRanda
14034 chr22 45210627 45210627 1 + G A STAD 45210617 + 45210597 45210637 41 CTTCATCAAGGTCCTGTGGAACATCTTGAAGCCCCTCATCA CTTCATCAAGGTCCTGTGGAACATCTTGAAACCCCTCATCA < 41bp 1 0.259910734465964 1 0.906419217586517 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45210617 chr22:45210627 nonsynonymous SNV . 0 hm6A_associated_SNPs_64601 0 0 0 2 45210623 45210638 mRNA hsa-miR-134 ARHGAP8 miRanda miRanda
14034 chr22 45210627 45210627 1 + G A STAD 45210617 + 45210597 45210637 41 CTTCATCAAGGTCCTGTGGAACATCTTGAAGCCCCTCATCA CTTCATCAAGGTCCTGTGGAACATCTTGAAACCCCTCATCA < 41bp 1 0.259910734465964 1 0.906419217586517 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 31 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45210617 chr22:45210627 nonsynonymous SNV . 0 hm6A_associated_SNPs_64601 0 0 0 2 45210625 45210638 mRNA hsa-miR-758 ARHGAP8 miRanda miRanda
14034 chr2 217366124 217366124 1 + G A STAD 217366120 + 217366100 217366140 41 AAGACTGAAGGAGTTGAAAGACCAGTAGACGCTCCTCTACT AAGACTGAAGGAGTTGAAAGACCAATAGACGCTCCTCTACT < 41bp 1 0.732662058885594 1 0.880888938903809 experiment 0.534675882228811 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 25 RPL37A ENSG00000197756 CDS Human protein_coding chr2:217366120 chr2:217366124 synonymous SNV . 0 hm6A_associated_SNPs_64604 0 0 1 1 217366112 217366136 mRNA hsa-miR-28-5p RPL37A miRanda miRanda
14034 chr17 30521045 30521045 1 + G C STAD 30521053 + 30521033 30521073 41 TCCAGAGAGGGAGACACGAAACTACTTGGACTGTGCTTCGA TCCAGAGAGGGACACACGAAACTACTTGGACTGTGCTTCGA < 41bp 1 0.407176870134065 1 0.823831796646118 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 13 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521053 chr17:30521045 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_64687 0 0 1 1 30521030 30521051 mRNA hsa-miR-187 RHOT1 miRanda miRanda
14034 chr10 90774152 90774152 1 + T A STAD 90774161 + 90774141 90774181 41 CCTCAAGGACATTACTAGTGACTCAGAAAATTCAAACTTCA CCTCAAGGACAATACTAGTGACTCAGAAAATTCAAACTTCA < 41bp 1 0.789478659037424 1 0.977401614189148 experiment 0.421042681925152 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 FAS ENSG00000026103 CDS Human protein_coding chr10:90774161 chr10:90774152 nonsynonymous SNV 0.002 1 hm6A_associated_SNPs_64696 0 0 1 1 90774144 90774165 mRNA hsa-miR-224 FAS miRanda miRanda
14034 chr19 21299790 21299790 1 + G A STAD 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAGTATTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.760551471981807 1 0.913121104240417 experiment 0.478897056036386 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299790 nonsynonymous SNV 0.065 0 hm6A_associated_SNPs_64746 0 0 0 5 21299771 21299793 mRNA hsa-miR-141 ZNF714 miRanda miRanda
14034 chr19 21299790 21299790 1 + G A STAD 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAGTATTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.760551471981807 1 0.913121104240417 experiment 0.478897056036386 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299790 nonsynonymous SNV 0.065 0 hm6A_associated_SNPs_64746 0 0 0 5 21299771 21299793 mRNA hsa-miR-200a ZNF714 miRanda miRanda
14034 chr19 21299790 21299790 1 + G A STAD 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAGTATTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.760551471981807 1 0.913121104240417 experiment 0.478897056036386 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299790 nonsynonymous SNV 0.065 0 hm6A_associated_SNPs_64746 0 0 0 5 21299788 21299809 mRNA hsa-miR-330-5p ZNF714 miRanda miRanda
14034 chr19 21299790 21299790 1 + G A STAD 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAGTATTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.760551471981807 1 0.913121104240417 experiment 0.478897056036386 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299790 nonsynonymous SNV 0.065 0 hm6A_associated_SNPs_64746 0 0 0 5 21299790 21299809 mRNA hsa-miR-326 ZNF714 miRanda miRanda
14034 chr19 21299790 21299790 1 + G A STAD 21299795 + 21299775 21299815 41 ATGAACTAAACCAGTGTTTGACAACTACCCAGAGCAAAATA ATGAACTAAACCAGTATTTGACAACTACCCAGAGCAAAATA < 41bp 1 0.760551471981807 1 0.913121104240417 experiment 0.478897056036386 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299795 chr19:21299790 nonsynonymous SNV 0.065 0 hm6A_associated_SNPs_64746 0 0 0 5 21299775 21299797 mRNA hsa-miR-505 ZNF714 miRanda miRanda
14034 chr11 120957792 120957792 1 + C A STAD 120957805 + 120957785 120957825 41 GTGGAATCCAAAACAAAATAACCTCTACCAGCCTTGTGAAA GTGGAATACAAAACAAAATAACCTCTACCAGCCTTGTGAAA < 41bp 1 0.457838282633423 1 0.932712554931641 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957805 chr11:120957792 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_64753 0 0 1 1 120957787 120957809 mRNA hsa-miR-154 TBCEL miRanda miRanda
14034 chr1 97250772 97250772 1 + C G STAD 97250752 + 97250732 97250772 41 GATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGC GATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGG < 41bp 1 0.770438867354807 1 0.978975296020508 experiment 0.459122265290385 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 41 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97250752 chr1:97250772 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_64804 0 0 1 1 97250768 97250794 mRNA hsa-miR-182 PTBP2 miRanda miRanda
14034 chr14 23240326 23240326 1 + C T STAD 23240339 + 23240319 23240359 41 CCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCAC CCCCCAGTGTGTTGTACATGACCTGGACAAATTACCTCCAC < 41bp 1 0.346063673342551 1 0.524809718132019 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 8 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240339 chr14:23240326 nonsynonymous SNV 0.386 4 hm6A_associated_SNPs_64824 0 0 1 1 23240313 23240336 mRNA hsa-miR-505 OXA1L miRanda miRanda
14034 chr17 42744852 42744852 1 + T G STAD 42744850 + 42744830 42744870 41 CCCCCAACTATCATCCACAAACTTAACCCCAAATAGCAATT CCCCCAACTATCATCCACAAACGTAACCCCAAATAGCAATT Direct Loss 1 0.694442116294985 1 0.652241230010986 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744850 chr17:42744852 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_64901 0 0 0 2 42744849 42744871 mRNA hsa-miR-137 C17orf104 miRanda miRanda
14034 chr17 42744852 42744852 1 + T G STAD 42744850 + 42744830 42744870 41 CCCCCAACTATCATCCACAAACTTAACCCCAAATAGCAATT CCCCCAACTATCATCCACAAACGTAACCCCAAATAGCAATT Direct Loss 1 0.694442116294985 1 0.652241230010986 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 23 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744850 chr17:42744852 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_64901 0 0 0 2 42744832 42744854 mRNA hsa-miR-382 C17orf104 miRanda miRanda
14034 chr19 50191446 50191446 1 + G C STAD 50191447 + 50191427 50191467 41 GGACTTCACCATCGACCTGGACTTCAAGGGCCAGCTGTGCG GGACTTCACCATCGACCTGCACTTCAAGGGCCAGCTGTGCG Direct Loss 1 0.688796620984687 1 0.978999733924866 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50191447 chr19:50191446 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_64908 0 0 1 1 50191439 50191460 mRNA hsa-miR-328 PRMT1 miRanda miRanda
14034 chr22 35719519 35719519 1 + G A STAD 35719525 + 35719505 35719545 41 TCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTAT TCCGCAGCTCGCCCAATCTGACAGGTGTGGTCACCATCTAT < 41bp 1 0.472477975413545 1 0.512614905834198 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 15 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719525 chr22:35719519 nonsynonymous SNV 0.945 3 hm6A_associated_SNPs_64930 0 0 1 1 35719509 35719533 mRNA hsa-miR-10a TOM1 miRanda miRanda
14034 chr17 61628105 61628105 1 + A T STAD 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTACGCGATGTACTGGAGTGTGCGGCCCGATA Direct Loss 1 0.629861447264273 1 0.993751406669617 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628105 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_64941 0 0 1 2 61628088 61628112 mRNA hsa-miR-145 DCAF7 miRanda miRanda
14034 chr17 61628105 61628105 1 + A T STAD 61628106 + 61628086 61628126 41 CTGGACAGTCTACGCGATGAACTGGAGTGTGCGGCCCGATA CTGGACAGTCTACGCGATGTACTGGAGTGTGCGGCCCGATA Direct Loss 1 0.629861447264273 1 0.993751406669617 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 20 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61628106 chr17:61628105 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_64941 0 0 1 2 61628090 61628113 mRNA hsa-miR-136 DCAF7 miRanda miRanda
14034 chr4 74283993 74283993 1 + A G STAD 74284011 + 74283991 74284031 41 ACACTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG ACGCTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG < 41bp 1 0.37018930162853 1 0.79862916469574 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74284011 chr4:74283993 synonymous SNV . 0 hm6A_associated_SNPs_64951 0 0 1 2 74283973 74283997 mRNA hsa-miR-18a ALB miRanda miRanda
14034 chr4 74283993 74283993 1 + A G STAD 74284011 + 74283991 74284031 41 ACACTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG ACGCTTTCTGAGAAGGAGAGACAAATCAAGAAACAAACGTG < 41bp 1 0.37018930162853 1 0.79862916469574 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 3 ALB ENSG00000163631 CDS Human protein_coding chr4:74284011 chr4:74283993 synonymous SNV . 0 hm6A_associated_SNPs_64951 0 0 1 2 74283973 74283997 mRNA hsa-miR-18b ALB miRanda miRanda
14034 chr12 95668625 95668625 1 + C T STAD 95668631 + 95668611 95668651 41 TTCAGAAGAGGAAGCACATAACTTTACAGATGGCTTCAGCC TTCAGAAGAGGAAGTACATAACTTTACAGATGGCTTCAGCC < 41bp 1 0.264964647784504 1 0.681149184703827 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 VEZT ENSG00000028203 CDS Human protein_coding chr12:95668631 chr12:95668625 nonsynonymous SNV 0.968 3 hm6A_associated_SNPs_64956 0 0 1 2 95668609 95668629 mRNA hsa-miR-218 VEZT miRanda miRanda
14034 chr12 95668625 95668625 1 + C T STAD 95668631 + 95668611 95668651 41 TTCAGAAGAGGAAGCACATAACTTTACAGATGGCTTCAGCC TTCAGAAGAGGAAGTACATAACTTTACAGATGGCTTCAGCC < 41bp 1 0.264964647784504 1 0.681149184703827 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 VEZT ENSG00000028203 CDS Human protein_coding chr12:95668631 chr12:95668625 nonsynonymous SNV 0.968 3 hm6A_associated_SNPs_64956 0 0 1 2 95668607 95668630 mRNA hsa-miR-135a VEZT miRanda miRanda
14034 chrX 74523346 74523346 1 + A T STAD 74523342 + 74523322 74523362 41 ACAGAAATACTTTGGAACAGACTAAGTTATTTAAGTAAAAT ACAGAAATACTTTGGAACAGACTATGTTATTTAAGTAAAAT < 41bp 1 0.790917123759417 1 0.811289131641388 experiment 0.418165752481165 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 UPRT ENSG00000094841 CDS Human protein_coding chrX:74523342 chrX:74523346 stoploss 0.979 0 hm6A_associated_SNPs_65015 0 0 1 1 74523343 74523364 mRNA hsa-miR-590-3p UPRT miRanda miRanda
14034 chr20 3899434 3899434 1 + G A STAD 3899437 + 3899417 3899457 41 TTGAAAGCACTTTTTTCGGAACACGAGGTAAGCTGACTTGT TTGAAAGCACTTTTTTCAGAACACGAGGTAAGCTGACTTGT < 41bp 1 0.648938834489872 1 0.0267199575901031 experiment 0.702122331020256 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 PANK2 ENSG00000125779 CDS Human protein_coding chr20:3899437 chr20:3899434 synonymous SNV . 0 hm6A_associated_SNPs_65024 0 0 1 1 3899425 3899443 mRNA hsa-miR-10a PANK2 miRanda miRanda
14034 chr11 3845574 3845574 1 + C T STAD 3845580 + 3845560 3845600 41 CCTGCATTCTCTGGCGGTTGACCAAGAAGCACACAGTAAGT CCTGCATTCTCTGGTGGTTGACCAAGAAGCACACAGTAAGT < 41bp 1 0.319467061651171 1 0.54591953754425 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 PGAP2 ENSG00000148985 CDS Human protein_coding chr11:3845580 chr11:3845574 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_65034 0 0 1 1 3845571 3845593 mRNA hsa-miR-218 PGAP2 miRanda miRanda
14034 chrX 41205775 41205775 1 + G A STAD 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTAGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.593325961003495 1 0.9478440284729 experiment 0.813348077993009 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205775 synonymous SNV . 0 hm6A_associated_SNPs_65049 0 0 1 3 41205772 41205792 mRNA hsa-miR-23a DDX3X miRanda miRanda
14034 chrX 41205775 41205775 1 + G A STAD 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTAGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.593325961003495 1 0.9478440284729 experiment 0.813348077993009 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205775 synonymous SNV . 0 hm6A_associated_SNPs_65049 0 0 1 3 41205765 41205785 mRNA hsa-miR-203 DDX3X miRanda miRanda
14034 chrX 41205775 41205775 1 + G A STAD 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTAGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.593325961003495 1 0.9478440284729 experiment 0.813348077993009 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205775 synonymous SNV . 0 hm6A_associated_SNPs_65049 0 0 1 3 41205772 41205792 mRNA hsa-miR-23b DDX3X miRanda miRanda
14034 chr15 64448924 64448924 1 + C G STAD 64448937 + 64448917 64448957 41 AACTCACCATGCCCTCTAGAACTTTGCCAAACACCACATGC AACTCACGATGCCCTCTAGAACTTTGCCAAACACCACATGC < 41bp 1 0.761172090200798 1 0.818216979503632 experiment 0.477655819598404 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 8 PPIB ENSG00000166794 CDS Human protein_coding chr15:64448937 chr15:64448924 nonsynonymous SNV 0.990 2 hm6A_associated_SNPs_65257 0 0 1 3 64448922 64448947 mRNA hsa-miR-182 SNX22 miRanda miRanda
14034 chr15 64448924 64448924 1 + C G STAD 64448937 + 64448917 64448957 41 AACTCACCATGCCCTCTAGAACTTTGCCAAACACCACATGC AACTCACGATGCCCTCTAGAACTTTGCCAAACACCACATGC < 41bp 1 0.761172090200798 1 0.818216979503632 experiment 0.477655819598404 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 8 PPIB ENSG00000166794 CDS Human protein_coding chr15:64448937 chr15:64448924 nonsynonymous SNV 0.990 2 hm6A_associated_SNPs_65257 0 0 1 3 64448903 64448929 mRNA hsa-miR-138 SNX22 miRanda miRanda
14034 chr15 64448924 64448924 1 + C G STAD 64448937 + 64448917 64448957 41 AACTCACCATGCCCTCTAGAACTTTGCCAAACACCACATGC AACTCACGATGCCCTCTAGAACTTTGCCAAACACCACATGC < 41bp 1 0.761172090200798 1 0.818216979503632 experiment 0.477655819598404 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 8 PPIB ENSG00000166794 CDS Human protein_coding chr15:64448937 chr15:64448924 nonsynonymous SNV 0.990 2 hm6A_associated_SNPs_65257 0 0 1 3 64448908 64448928 mRNA hsa-miR-125a-3p SNX22 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273135 152273156 mRNA hsa-miR-17 RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273135 152273156 mRNA hsa-miR-20a RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273131 152273156 mRNA hsa-miR-93 RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273135 152273156 mRNA hsa-miR-106a RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273137 152273156 mRNA hsa-miR-106b RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273127 152273155 mRNA hsa-miR-302a RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273127 152273155 mRNA hsa-miR-302b RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273132 152273155 mRNA hsa-miR-302c RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273133 152273155 mRNA hsa-miR-302d RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273127 152273155 mRNA hsa-miR-372 RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273134 152273155 mRNA hsa-miR-373 RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273135 152273156 mRNA hsa-miR-20b RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273135 152273155 mRNA hsa-miR-520e RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273134 152273155 mRNA hsa-miR-520a-3p RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273135 152273155 mRNA hsa-miR-520b RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273134 152273155 mRNA hsa-miR-520c-3p RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273134 152273156 mRNA hsa-miR-519d RIF1 miRanda miRanda
14034 chr2 152273138 152273138 1 + T C STAD 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGCACGTACTAGAG < 41bp 1 0.759375058421008 1 0.760267734527588 experiment 0.481249883157984 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273138 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65259 0 0 1 18 152273135 152273155 mRNA hsa-miR-520d-3p RIF1 miRanda miRanda
14034 chr1 45808127 45808127 1 + G A STAD 45808147 + 45808127 45808167 41 GCTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA ACTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA < 41bp 1 0.549989783163964 1 0.503983080387115 experiment 0.900020433672073 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808147 chr1:45808127 synonymous SNV . 0 hm6A_associated_SNPs_65267 0 0 1 3 45808109 45808130 mRNA hsa-miR-29a TOE1 miRanda miRanda
14034 chr1 45808127 45808127 1 + G A STAD 45808147 + 45808127 45808167 41 GCTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA ACTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA < 41bp 1 0.549989783163964 1 0.503983080387115 experiment 0.900020433672073 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808147 chr1:45808127 synonymous SNV . 0 hm6A_associated_SNPs_65267 0 0 1 3 45808108 45808130 mRNA hsa-miR-29b TOE1 miRanda miRanda
14034 chr1 45808127 45808127 1 + G A STAD 45808147 + 45808127 45808167 41 GCTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA ACTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA < 41bp 1 0.549989783163964 1 0.503983080387115 experiment 0.900020433672073 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808147 chr1:45808127 synonymous SNV . 0 hm6A_associated_SNPs_65267 0 0 1 3 45808109 45808130 mRNA hsa-miR-29c TOE1 miRanda miRanda
14034 chr14 24569353 24569353 1 + G A STAD 24569363 + 24569343 24569383 41 CGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTG CGTGTACTGGAAGGGCATTGACCAGCCTCTTCCACCTGGTG < 41bp 1 0.146697912183221 1 0.0534883439540863 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 11 PCK2 ENSG00000100889 CDS Human protein_coding chr14:24569363 chr14:24569353 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_65276 0 0 1 2 24569340 24569362 mRNA hsa-miR-365 PCK2 miRanda miRanda
14034 chr14 24569353 24569353 1 + G A STAD 24569363 + 24569343 24569383 41 CGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTG CGTGTACTGGAAGGGCATTGACCAGCCTCTTCCACCTGGTG < 41bp 1 0.146697912183221 1 0.0534883439540863 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 11 PCK2 ENSG00000100889 CDS Human protein_coding chr14:24569363 chr14:24569353 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_65276 0 0 1 2 24569353 24569372 mRNA hsa-miR-485-5p PCK2 miRanda miRanda
14034 chr12 69992114 69992114 1 + A G STAD 69992121 + 69992101 69992141 41 GTTGCCAACCATCATAGCTGACAATGCAGGCTATGACAGTG GTTGCCAACCATCGTAGCTGACAATGCAGGCTATGACAGTG < 41bp 1 0.695589667546309 1 0.237050771713257 experiment 0.608820664907382 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 14 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69992121 chr12:69992114 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_65347 0 0 1 2 69992108 69992129 mRNA hsa-miR-33a CCT2 miRanda miRanda
14034 chr12 69992114 69992114 1 + A G STAD 69992121 + 69992101 69992141 41 GTTGCCAACCATCATAGCTGACAATGCAGGCTATGACAGTG GTTGCCAACCATCGTAGCTGACAATGCAGGCTATGACAGTG < 41bp 1 0.695589667546309 1 0.237050771713257 experiment 0.608820664907382 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 14 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69992121 chr12:69992114 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_65347 0 0 1 2 69992109 69992129 mRNA hsa-miR-33b CCT2 miRanda miRanda
14034 chr20 44521890 44521890 1 + A G STAD 44521902 + 44521882 44521922 41 CTCCTCCTATGAGCAGAATGACAACTCCCTGGTCTACTTTG CTCCTCCTGTGAGCAGAATGACAACTCCCTGGTCTACTTTG < 41bp 1 0.671783264300881 1 0.00099608302116394 experiment 0.656433471398239 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 9 CTSA ENSG00000064601 CDS Human protein_coding chr20:44521902 chr20:44521890 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_65354 0 0 1 2 44521873 44521894 mRNA hsa-miR-376a CTSA miRanda miRanda
14034 chr20 44521890 44521890 1 + A G STAD 44521902 + 44521882 44521922 41 CTCCTCCTATGAGCAGAATGACAACTCCCTGGTCTACTTTG CTCCTCCTGTGAGCAGAATGACAACTCCCTGGTCTACTTTG < 41bp 1 0.671783264300881 1 0.00099608302116394 experiment 0.656433471398239 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 9 CTSA ENSG00000064601 CDS Human protein_coding chr20:44521902 chr20:44521890 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_65354 0 0 1 2 44521872 44521894 mRNA hsa-miR-376b CTSA miRanda miRanda
14034 chr19 12903585 12903585 1 + A T STAD 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCTACGGCTGT < 41bp 1 0.502325607183764 1 0.999545454978943 experiment 0.995348785632472 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903585 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65355 0 0 0 6 12903582 12903605 mRNA hsa-miR-15a JUNB miRanda miRanda
14034 chr19 12903585 12903585 1 + A T STAD 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCTACGGCTGT < 41bp 1 0.502325607183764 1 0.999545454978943 experiment 0.995348785632472 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903585 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65355 0 0 0 6 12903585 12903605 mRNA hsa-miR-16 JUNB miRanda miRanda
14034 chr19 12903585 12903585 1 + A T STAD 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCTACGGCTGT < 41bp 1 0.502325607183764 1 0.999545454978943 experiment 0.995348785632472 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903585 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65355 0 0 0 6 12903584 12903605 mRNA hsa-miR-15b JUNB miRanda miRanda
14034 chr19 12903585 12903585 1 + A T STAD 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCTACGGCTGT < 41bp 1 0.502325607183764 1 0.999545454978943 experiment 0.995348785632472 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903585 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65355 0 0 0 6 12903584 12903605 mRNA hsa-miR-195 JUNB miRanda miRanda
14034 chr19 12903585 12903585 1 + A T STAD 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCTACGGCTGT < 41bp 1 0.502325607183764 1 0.999545454978943 experiment 0.995348785632472 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903585 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65355 0 0 0 6 12903582 12903605 mRNA hsa-miR-424 JUNB miRanda miRanda
14034 chr19 12903585 12903585 1 + A T STAD 12903573 + 12903553 12903593 41 AGCTCAAACAGAAGGTCATGACCCACGTCAGCAACGGCTGT AGCTCAAACAGAAGGTCATGACCCACGTCAGCTACGGCTGT < 41bp 1 0.502325607183764 1 0.999545454978943 experiment 0.995348785632472 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 JUNB ENSG00000171223 CDS Human protein_coding chr19:12903573 chr19:12903585 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65355 0 0 0 6 12903582 12903605 mRNA hsa-miR-497 JUNB miRanda miRanda
14034 chr7 86813769 86813769 1 + A G STAD 86813766 + 86813746 86813786 41 CAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGAC CAGAAGTGGTTCATGAGTTGACAGGCACTGAGCCAGGTGAC < 41bp 1 0.610090964015091 1 0.862306594848633 experiment 0.779818071969817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86813766 chr7:86813769 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65402 0 0 1 2 86813752 86813780 mRNA hsa-miR-24 DMTF1 miRanda miRanda
14034 chr7 86813769 86813769 1 + A G STAD 86813766 + 86813746 86813786 41 CAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGAC CAGAAGTGGTTCATGAGTTGACAGGCACTGAGCCAGGTGAC < 41bp 1 0.610090964015091 1 0.862306594848633 experiment 0.779818071969817 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86813766 chr7:86813769 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_65402 0 0 1 2 86813758 86813782 mRNA hsa-miR-149 DMTF1 miRanda miRanda
14034 chr12 112460298 112460298 1 + T G STAD 112460302 + 112460282 112460322 41 GATCATGGGGAAGATCTTAGACCAAGGGGAGGACTTCCCAG GATCATGGGGAAGATCGTAGACCAAGGGGAGGACTTCCCAG < 41bp 1 0.707285162515119 1 0.992720127105713 experiment 0.585429674969762 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 17 ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460302 chr12:112460298 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_65425 0 0 1 1 112460279 112460301 mRNA hsa-miR-499-5p ERP29 miRanda miRanda
14034 chr8 32621813 32621813 1 + C T STAD 32621831 + 32621811 32621851 41 TCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTC TCTGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTC < 41bp 1 0.771094595270243 1 0.998862385749817 experiment 0.457810809459515 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 NRG1 ENSG00000157168 CDS Human protein_coding chr8:32621831 chr8:32621813 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_65526 0 0 0 2 32621800 32621823 mRNA hsa-miR-214 NRG1 miRanda miRanda
14034 chr8 32621813 32621813 1 + C T STAD 32621831 + 32621811 32621851 41 TCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTC TCTGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTC < 41bp 1 0.771094595270243 1 0.998862385749817 experiment 0.457810809459515 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 NRG1 ENSG00000157168 CDS Human protein_coding chr8:32621831 chr8:32621813 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_65526 0 0 0 2 32621804 32621831 mRNA hsa-miR-370 NRG1 miRanda miRanda
14034 chr15 48628287 48628287 1 + G A STAD 48628268 + 48628248 48628288 41 CGGTCAGGCTTGGCTGCAAAACACTTTATTGATGTAGGAGG CGGTCAGGCTTGGCTGCAAAACACTTTATTGATGTAGGAAG < 41bp 1 0.512479076793106 1 0.170805394649506 experiment 0.975041846413789 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 40 DUT ENSG00000128951 CDS Human protein_coding chr15:48628268 chr15:48628287 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_65535 0 0 1 1 48628276 48628287 mRNA hsa-miR-425 DUT miRanda miRanda
14034 chr12 69981976 69981976 1 + T C STAD 69981969 + 69981949 69981989 41 CAAAAAAGATTCATCCACAGACCATCATAGCGGGTTGGAGA CAAAAAAGATTCATCCACAGACCATCACAGCGGGTTGGAGA < 41bp 1 0.316384733164972 1 0.84917026758194 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69981969 chr12:69981976 nonsynonymous SNV 0.993 2 hm6A_associated_SNPs_65542 0 0 1 1 69981968 69981991 mRNA hsa-miR-150 CCT2 miRanda miRanda
14034 chr16 2257253 2257253 1 + C A STAD 2257248 + 2257228 2257268 41 TCCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTG TCCACATCTGGGACTTGAAAACAGAACACAACGAGCAGCTG < 41bp 1 0.6914222278611 1 0.810984969139099 experiment 0.6171555442778 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 26 MLST8 ENSG00000167965 CDS Human protein_coding chr16:2257248 chr16:2257253 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_65586 0 0 1 1 2257240 2257259 mRNA hsa-miR-599 MLST8 miRanda miRanda
14034 chr3 160132293 160132293 1 + A T STAD 160132281 + 160132261 160132301 41 AAAGCCAAAAAACTGGAGAAACAACTTCAAAAAGATAAAGA AAAGCCAAAAAACTGGAGAAACAACTTCAAAATGATAAAGA < 41bp 1 0.537962356185801 1 0.42344069480896 experiment 0.924075287628397 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132281 chr3:160132293 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_65603 0 0 1 1 160132274 160132294 mRNA hsa-miR-129-5p SMC4 miRanda miRanda
14034 chr14 90870757 90870757 1 + G A STAD 90870772 + 90870752 90870792 41 ACTACGTCACGTCATGACAAACTTAGGAGAAAAACTAACAG ACTACATCACGTCATGACAAACTTAGGAGAAAAACTAACAG < 41bp 1 0.533970801703196 1 0.889662384986877 experiment 0.932058396593608 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 6 CALM1 ENSG00000198668 CDS Human protein_coding chr14:90870772 chr14:90870757 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_65659 0 0 1 1 90870754 90870776 mRNA hsa-miR-382 CALM1 miRanda miRanda
14034 chr9 98643499 98643499 1 + G A STAD 98643495 + 98643475 98643515 41 GAGACTACCAAAGAGAAGGAACCCGGTTTCTTTATGGACAC GAGACTACCAAAGAGAAGGAACCCAGTTTCTTTATGGACAC < 41bp 1 0.746308888705369 1 0.955763816833496 experiment 0.507382222589261 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 25 ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98643495 chr9:98643499 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_65660 0 0 1 1 98643498 98643519 mRNA hsa-miR-142-3p C9orf102 miRanda miRanda
14034 chr15 92459421 92459421 1 + G A STAD 92459430 + 92459410 92459450 41 CGGCGCTGCCCGAGTTCCTGACCCACCAGTACAAGTACGAG CGGCGCTGCCCAAGTTCCTGACCCACCAGTACAAGTACGAG < 41bp 1 0.0891605090737002 1 0.976567387580872 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92459430 chr15:92459421 nonsynonymous SNV 0.973 4 hm6A_associated_SNPs_65746 0 0 1 1 92459409 92459430 mRNA hsa-miR-873 SLCO3A1 miRanda miRanda
14034 chr22 41305152 41305152 1 + C T STAD 41305157 + 41305137 41305177 41 ATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTG ATGCCGGGCTCGTGGTGCAGACATTTTAGCCTATCCACCTG < 41bp 1 0.352919431582933 1 0.00169950723648071 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 16 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41305157 chr22:41305152 synonymous SNV . 0 hm6A_associated_SNPs_65753 0 0 0 1 41305136 41305159 mRNA hsa-miR-346 XPNPEP3 miRanda miRanda
14034 chr9 139310805 139310805 1 + C T STAD 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGTCTGACC < 41bp 1 0.591817042899847 1 0.953003525733948 experiment 0.816365914200305 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310805 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_65762 0 0 1 2 139310797 139310817 mRNA hsa-miR-330-5p PMPCA miRanda miRanda
14034 chr9 139310805 139310805 1 + C T STAD 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGTCTGACC < 41bp 1 0.591817042899847 1 0.953003525733948 experiment 0.816365914200305 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310805 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_65762 0 0 1 2 139310798 139310817 mRNA hsa-miR-326 PMPCA miRanda miRanda
14034 chr9 139310805 139310805 1 + C T STAD 139310797 + 139310777 139310817 41 GTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC GTTTGAGCTGGAGGACCTGAACCTGCGGTCTGACCCAGAGC < 41bp 1 0.586240600149036 1 0.952887952327728 experiment 0.827518799701928 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310797 chr9:139310805 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_65763 0 0 1 2 139310797 139310817 mRNA hsa-miR-330-5p PMPCA miRanda miRanda
14034 chr9 139310805 139310805 1 + C T STAD 139310797 + 139310777 139310817 41 GTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACCCAGAGC GTTTGAGCTGGAGGACCTGAACCTGCGGTCTGACCCAGAGC < 41bp 1 0.586240600149036 1 0.952887952327728 experiment 0.827518799701928 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310797 chr9:139310805 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_65763 0 0 1 2 139310798 139310817 mRNA hsa-miR-326 PMPCA miRanda miRanda
14034 chr5 170395365 170395365 1 + T G STAD 170395346 + 170395326 170395366 41 TCTTGGATCAGTTTCGTAAAACATATGTTGGTGATCAACTT TCTTGGATCAGTTTCGTAAAACATATGTTGGTGATCAACGT < 41bp 1 0.301882864008457 1 0.302214354276657 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 RANBP17 ENSG00000204764 CDS Human protein_coding chr5:170395346 chr5:170395365 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_65777 0 0 1 1 170395345 170395367 mRNA hsa-miR-382 RANBP17 miRanda miRanda
14034 chr4 26432619 26432619 1 + T C STAD 26432629 + 26432609 26432649 41 ACAGCCACAGTGGTATCCTAACTACCGTCTTTTTGCTAGGA ACAGCCACAGCGGTATCCTAACTACCGTCTTTTTGCTAGGA < 41bp 1 0.500603812817927 1 0.987903535366058 experiment 0.998792374364145 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 11 RBPJ ENSG00000168214 CDS Human protein_coding chr4:26432629 chr4:26432619 nonsynonymous SNV 0.854 2 hm6A_associated_SNPs_65813 0 0 1 2 26432611 26432638 mRNA hsa-let-7b RBPJ miRanda miRanda
14034 chr4 26432619 26432619 1 + T C STAD 26432629 + 26432609 26432649 41 ACAGCCACAGTGGTATCCTAACTACCGTCTTTTTGCTAGGA ACAGCCACAGCGGTATCCTAACTACCGTCTTTTTGCTAGGA < 41bp 1 0.500603812817927 1 0.987903535366058 experiment 0.998792374364145 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 11 RBPJ ENSG00000168214 CDS Human protein_coding chr4:26432629 chr4:26432619 nonsynonymous SNV 0.854 2 hm6A_associated_SNPs_65813 0 0 1 2 26432615 26432638 mRNA hsa-let-7d RBPJ miRanda miRanda
14034 chr10 131959215 131959215 1 + C A STAD 131959204 + 131959184 131959224 41 ACCTTCGCTTGAAGAAATTGACTCATGCTGCCCCCTGCATG ACCTTCGCTTGAAGAAATTGACTCATGCTGCACCCTGCATG < 41bp 1 0.544297230468419 1 0.989534258842468 experiment 0.911405539063162 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131959204 chr10:131959215 synonymous SNV . 0 hm6A_associated_SNPs_65814 0 0 0 2 131959193 131959215 mRNA hsa-miR-103 GLRX3 miRanda miRanda
14034 chr10 131959215 131959215 1 + C A STAD 131959204 + 131959184 131959224 41 ACCTTCGCTTGAAGAAATTGACTCATGCTGCCCCCTGCATG ACCTTCGCTTGAAGAAATTGACTCATGCTGCACCCTGCATG < 41bp 1 0.544297230468419 1 0.989534258842468 experiment 0.911405539063162 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131959204 chr10:131959215 synonymous SNV . 0 hm6A_associated_SNPs_65814 0 0 0 2 131959193 131959215 mRNA hsa-miR-107 GLRX3 miRanda miRanda
14034 chr6 161518192 161518192 1 + A T STAD 161518172 + 161518152 161518192 41 ATGCCATAGTGACCCTCCTAACCCACACCTCATTATCCCCA ATGCCATAGTGACCCTCCTAACCCACACCTCATTATCCCCT < 41bp 1 0.103918007137834 1 0.559639811515808 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161518172 chr6:161518192 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_65822 0 0 1 1 161518173 161518194 mRNA hsa-miR-491-5p MAP3K4 miRanda miRanda
14034 chrX 73045008 73045008 1 - A G STAD 73045003 - 73044983 73045023 41 AACTTTAAAATATACTGAAAACATAAGGGACTAAGCTTGTT AACTTTAAAATATACCGAAAACATAAGGGACTAAGCTTGTT < 41bp 1 0.390823776257578 1 0.592909157276154 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 16 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045003 chrX:73045008 . . 0 hm6A_associated_SNPs_65877 0 0 1 1 73044991 73045012 lncRNA hsa-miR-2114-5p XIST miRanda starBase2
14034 chrX 73045008 73045008 1 - A G STAD 73045022 - 73045002 73045042 41 CACATGGAAACTGCTTTTAAACTTTAAAATATACTGAAAAC CACATGGAAACTGCTTTTAAACTTTAAAATATACCGAAAAC < 41bp 1 0.384636171575111 1 0.216197222471237 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045022 chrX:73045008 . . 0 hm6A_associated_SNPs_65878 0 0 1 1 73044991 73045012 lncRNA hsa-miR-2114-5p XIST miRanda starBase2
14034 chr1 161070003 161070003 1 + G A STAD 161070004 + 161069984 161070024 41 TCCACAGGTTTGCATCCTGGACTTTATCTAAATAGTGCCAA TCCACAGGTTTGCATCCTGAACTTTATCTAAATAGTGCCAA < 41bp 1 0.723720977562925 1 0.477865219116211 experiment 0.55255804487415 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 KLHDC9 ENSG00000162755 CDS Human protein_coding chr1:161070004 chr1:161070003 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_65887 0 0 0 3 161070003 161070025 mRNA hsa-miR-96 KLHDC9 miRanda miRanda
14034 chr1 161070003 161070003 1 + G A STAD 161070004 + 161069984 161070024 41 TCCACAGGTTTGCATCCTGGACTTTATCTAAATAGTGCCAA TCCACAGGTTTGCATCCTGAACTTTATCTAAATAGTGCCAA < 41bp 1 0.723720977562925 1 0.477865219116211 experiment 0.55255804487415 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 KLHDC9 ENSG00000162755 CDS Human protein_coding chr1:161070004 chr1:161070003 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_65887 0 0 0 3 161070001 161070025 mRNA hsa-miR-182 KLHDC9 miRanda miRanda
14034 chr1 161070003 161070003 1 + G A STAD 161070004 + 161069984 161070024 41 TCCACAGGTTTGCATCCTGGACTTTATCTAAATAGTGCCAA TCCACAGGTTTGCATCCTGAACTTTATCTAAATAGTGCCAA < 41bp 1 0.723720977562925 1 0.477865219116211 experiment 0.55255804487415 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 KLHDC9 ENSG00000162755 CDS Human protein_coding chr1:161070004 chr1:161070003 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_65887 0 0 0 3 161069999 161070025 mRNA hsa-miR-183 KLHDC9 miRanda miRanda
14034 chr11 65268497 65268497 1 + A G STAD 65268509 + 65268489 65268529 41 TTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCA TTTACACGGATTTGAGGAAAACCAAATGAATTTGATAGCCA < 41bp 1 0.00763400755149237 1 0.886099636554718 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 9 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268509 chr11:65268497 . . 0 hm6A_associated_SNPs_65888 0 0 1 2 65268497 65268518 lncRNA hsa-miR-664b-3p MALAT1 miRanda starBase2
14034 chr11 65268497 65268497 1 + A G STAD 65268509 + 65268489 65268529 41 TTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCA TTTACACGGATTTGAGGAAAACCAAATGAATTTGATAGCCA < 41bp 1 0.00763400755149237 1 0.886099636554718 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock|31328227;GSE128699;miCLIP;HCT116;Control 9 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268509 chr11:65268497 . . 0 hm6A_associated_SNPs_65888 0 0 1 2 65268488 65268508 lncRNA hsa-miR-670-3p MALAT1 miRanda starBase2
14034 chr11 4150330 4150330 1 + T C STAD 4150350 + 4150330 4150370 41 TACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGAGA CACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGAGA < 41bp 1 0.506279827632365 1 0.597431838512421 experiment 0.987440344735271 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 RRM1 ENSG00000167325 CDS Human protein_coding chr11:4150350 chr11:4150330 synonymous SNV . 0 hm6A_associated_SNPs_65890 0 0 1 1 4150310 4150331 mRNA hsa-miR-543 RRM1 miRanda miRanda
14034 chr2 86352118 86352118 1 + A G STAD 86352126 + 86352106 86352146 41 TCTTGTGTCTAGAGCAAAAAACAACGCTGAGAGAATCTTTT TCTTGTGTCTAGGGCAAAAAACAACGCTGAGAGAATCTTTT < 41bp 1 0.689948439511451 1 0.00406348705291748 experiment 0.620103120977098 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352126 chr2:86352118 nonsynonymous SNV . 0 hm6A_associated_SNPs_65907 0 0 1 1 86352118 86352126 mRNA hsa-miR-129-5p PTCD3 miRanda miRanda
14034 chr1 76256992 76256992 1 + T C STAD 76256979 + 76256959 76256999 41 TTTTATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTG TTTTATTGTAGGAGAAATTGACACAAGATTCTCCTTTTGTG < 41bp 1 0.658345601142781 1 0.358961343765259 experiment 0.683308797714439 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256979 chr1:76256992 synonymous SNV . 0 hm6A_associated_SNPs_65934 0 0 1 5 76256991 76257013 mRNA hsa-miR-17 RABGGTB miRanda miRanda
14034 chr1 76256992 76256992 1 + T C STAD 76256979 + 76256959 76256999 41 TTTTATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTG TTTTATTGTAGGAGAAATTGACACAAGATTCTCCTTTTGTG < 41bp 1 0.658345601142781 1 0.358961343765259 experiment 0.683308797714439 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256979 chr1:76256992 synonymous SNV . 0 hm6A_associated_SNPs_65934 0 0 1 5 76256991 76257013 mRNA hsa-miR-93 RABGGTB miRanda miRanda
14034 chr1 76256992 76256992 1 + T C STAD 76256979 + 76256959 76256999 41 TTTTATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTG TTTTATTGTAGGAGAAATTGACACAAGATTCTCCTTTTGTG < 41bp 1 0.658345601142781 1 0.358961343765259 experiment 0.683308797714439 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256979 chr1:76256992 synonymous SNV . 0 hm6A_associated_SNPs_65934 0 0 1 5 76256991 76257013 mRNA hsa-miR-106a RABGGTB miRanda miRanda
14034 chr1 76256992 76256992 1 + T C STAD 76256979 + 76256959 76256999 41 TTTTATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTG TTTTATTGTAGGAGAAATTGACACAAGATTCTCCTTTTGTG < 41bp 1 0.658345601142781 1 0.358961343765259 experiment 0.683308797714439 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256979 chr1:76256992 synonymous SNV . 0 hm6A_associated_SNPs_65934 0 0 1 5 76256991 76257013 mRNA hsa-miR-20b RABGGTB miRanda miRanda
14034 chr1 76256992 76256992 1 + T C STAD 76256979 + 76256959 76256999 41 TTTTATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTG TTTTATTGTAGGAGAAATTGACACAAGATTCTCCTTTTGTG < 41bp 1 0.658345601142781 1 0.358961343765259 experiment 0.683308797714439 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 34 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256979 chr1:76256992 synonymous SNV . 0 hm6A_associated_SNPs_65934 0 0 1 5 76256991 76257013 mRNA hsa-miR-519d RABGGTB miRanda miRanda
14034 chr17 58734051 58734051 1 + C T STAD 58734042 + 58734022 58734062 41 GCGTATGCTCCGAGCAGATAACACTAGTGCCATAGTAATCT GCGTATGCTCCGAGCAGATAACACTAGTGTCATAGTAATCT < 41bp 1 0.583691083212556 1 0.833874344825745 experiment 0.832617833574888 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 30 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58734042 chr17:58734051 nonsynonymous SNV 0.983 1 hm6A_associated_SNPs_65936 0 0 1 1 58734034 58734055 mRNA hsa-miR-183 PPM1D miRanda miRanda
14034 chr19 21300315 21300315 1 + A G STAD 21300316 + 21300296 21300336 41 TTCATTCATGTTAAAGAAAAACCCTACAAATGTGAAGAATG TTCATTCATGTTAAAGAAAGACCCTACAAATGTGAAGAATG < 41bp 1 0.580790174857224 1 0.989939570426941 experiment 0.838419650285553 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300316 chr19:21300315 nonsynonymous SNV 0.057 2 hm6A_associated_SNPs_65956 0 0 1 2 21300311 21300331 mRNA hsa-miR-23a ZNF714 miRanda miRanda
14034 chr19 21300315 21300315 1 + A G STAD 21300316 + 21300296 21300336 41 TTCATTCATGTTAAAGAAAAACCCTACAAATGTGAAGAATG TTCATTCATGTTAAAGAAAGACCCTACAAATGTGAAGAATG < 41bp 1 0.580790174857224 1 0.989939570426941 experiment 0.838419650285553 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300316 chr19:21300315 nonsynonymous SNV 0.057 2 hm6A_associated_SNPs_65956 0 0 1 2 21300311 21300331 mRNA hsa-miR-23b ZNF714 miRanda miRanda
14034 chr12 27475266 27475266 1 + A G STAD 27475277 + 27475257 27475297 41 CTAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGA CTAGTGCCAGATACCACAGAACCGGACTACAAATCCAAAGA < 41bp 1 0.473983225455411 1 0.900416493415833 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 STK38L ENSG00000211455 CDS Human protein_coding chr12:27475277 chr12:27475266 nonsynonymous SNV 0.987 1 hm6A_associated_SNPs_65959 0 0 1 2 27475261 27475267 mRNA hsa-miR-96 STK38L miRanda miRanda
14034 chr12 27475266 27475266 1 + A G STAD 27475277 + 27475257 27475297 41 CTAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGA CTAGTGCCAGATACCACAGAACCGGACTACAAATCCAAAGA < 41bp 1 0.473983225455411 1 0.900416493415833 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 STK38L ENSG00000211455 CDS Human protein_coding chr12:27475277 chr12:27475266 nonsynonymous SNV 0.987 1 hm6A_associated_SNPs_65959 0 0 1 2 27475261 27475267 mRNA hsa-miR-1271 STK38L miRanda miRanda
14034 chr11 65269794 65269794 1 + A G STAD 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATTTAATAATAATTTAAAACTACTATAGAAGCTGCAGAG < 41bp 1 0.0601146029228889 1 0.471924841403961 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269794 . . 0 hm6A_associated_SNPs_65970 0 0 1 3 65269782 65269804 lncRNA hsa-miR-3194-3p MALAT1 miRanda starBase2
14034 chr11 65269794 65269794 1 + A G STAD 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATTTAATAATAATTTAAAACTACTATAGAAGCTGCAGAG < 41bp 1 0.0601146029228889 1 0.471924841403961 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269794 . . 0 hm6A_associated_SNPs_65970 0 0 1 3 65269783 65269805 lncRNA hsa-miR-5691 MALAT1 miRanda starBase2
14034 chr11 65269794 65269794 1 + A G STAD 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATTTAATAATAATTTAAAACTACTATAGAAGCTGCAGAG < 41bp 1 0.0601146029228889 1 0.471924841403961 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269794 . . 0 hm6A_associated_SNPs_65970 0 0 1 3 65269783 65269805 lncRNA hsa-miR-6805-3p MALAT1 miRanda starBase2
14034 chr16 58036471 58036471 1 + G A STAD 58036482 + 58036462 58036502 41 CCTGAAGATGACAGCACAAAACACGGGGGACGGGTGCGCAC CCTGAAGATAACAGCACAAAACACGGGGGACGGGTGCGCAC < 41bp 1 0.725579803910959 1 0.157470732927322 experiment 0.548840392178081 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 10 USB1 ENSG00000103005 CDS Human protein_coding chr16:58036482 chr16:58036471 nonsynonymous SNV 0.962 2 hm6A_associated_SNPs_65974 0 0 1 1 58036459 58036480 mRNA hsa-miR-218 C16orf57 miRanda miRanda
14034 chr8 95877786 95877786 1 + G A STAD 95877804 + 95877784 95877824 41 AAGTAGACGGACTGCCAAAGACCTTTGGGAAGTTGTTGTTC AAATAGACGGACTGCCAAAGACCTTTGGGAAGTTGTTGTTC < 41bp 1 0.290751327876911 1 0.985557436943054 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 3 INTS8 ENSG00000164941 CDS Human protein_coding chr8:95877804 chr8:95877786 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_66049 0 0 1 1 95877784 95877806 mRNA hsa-miR-431 INTS8 miRanda miRanda
14034 chr11 62532861 62532861 1 + A T STAD 62532866 + 62532846 62532886 41 CCAACCCACCATGTTACAAGACAATGGATGAGGTGAGTGGA CCAACCCACCATGTTTCAAGACAATGGATGAGGTGAGTGGA < 41bp 1 0.75692505550205 1 0.346224904060364 experiment 0.4861498889959 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 POLR2G ENSG00000168002 CDS Human protein_coding chr11:62532866 chr11:62532861 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_66057 0 0 1 2 62532842 62532863 mRNA hsa-miR-194 POLR2G miRanda miRanda
14034 chr11 62532861 62532861 1 + A T STAD 62532866 + 62532846 62532886 41 CCAACCCACCATGTTACAAGACAATGGATGAGGTGAGTGGA CCAACCCACCATGTTTCAAGACAATGGATGAGGTGAGTGGA < 41bp 1 0.75692505550205 1 0.346224904060364 experiment 0.4861498889959 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 POLR2G ENSG00000168002 CDS Human protein_coding chr11:62532866 chr11:62532861 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_66057 0 0 1 2 62532848 62532868 mRNA hsa-miR-431 POLR2G miRanda miRanda
14034 chr16 89611118 89611118 1 + G A STAD 89611107 + 89611087 89611127 41 GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTGA GGCGTCCACGAACCGAGCTGACATTTTGGACAGTGCTCTGA < 41bp 1 0.759495393778134 1 0.911632061004639 experiment 0.481009212443732 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 SPG7 ENSG00000197912 CDS Human protein_coding chr16:89611107 chr16:89611118 nonsynonymous SNV 0.974 1 hm6A_associated_SNPs_66068 0 0 1 2 89611110 89611131 mRNA hsa-miR-376a SPG7 miRanda miRanda
14034 chr16 89611118 89611118 1 + G A STAD 89611107 + 89611087 89611127 41 GGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTGA GGCGTCCACGAACCGAGCTGACATTTTGGACAGTGCTCTGA < 41bp 1 0.759495393778134 1 0.911632061004639 experiment 0.481009212443732 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 32 SPG7 ENSG00000197912 CDS Human protein_coding chr16:89611107 chr16:89611118 nonsynonymous SNV 0.974 1 hm6A_associated_SNPs_66068 0 0 1 2 89611109 89611131 mRNA hsa-miR-376b SPG7 miRanda miRanda
14034 chr1 163044307 163044307 1 + A T STAD 163044319 + 163044299 163044339 41 AGGAGCCAAGAGTTCAGCAGACTGTGCTTCCCTGGTCCCTC AGGAGCCATGAGTTCAGCAGACTGTGCTTCCCTGGTCCCTC < 41bp 1 0.776630951188762 1 0.949413537979126 experiment 0.446738097622476 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 9 RGS4 ENSG00000117152 CDS Human protein_coding chr1:163044319 chr1:163044307 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_66069 0 0 0 1 163044285 163044307 mRNA hsa-miR-328 RGS4 miRanda miRanda
14034 chr1 10321979 10321979 1 + T G STAD 10321994 + 10321974 10322014 41 ACTTTTTGAGAAAATCAATGACAACTGTAATGAAGAAATGT ACTTTGTGAGAAAATCAATGACAACTGTAATGAAGAAATGT < 41bp 1 0.368830473610902 1 0.0889197885990143 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10321994 chr1:10321979 nonsynonymous SNV 0.952 5 hm6A_associated_SNPs_66093 0 0 1 1 10321965 10321984 mRNA hsa-miR-371-5p KIF1B miRanda miRanda
14034 chr14 39597518 39597518 1 + A C STAD 39597536 + 39597516 39597556 41 TAATTGGTTTGGAGAAAGAGACTTTACTCCAGAATTGGTAG TACTTGGTTTGGAGAAAGAGACTTTACTCCAGAATTGGTAG < 41bp 1 0.35676573528298 1 0.436878591775894 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39597536 chr14:39597518 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_66102 0 0 1 1 39597496 39597518 mRNA hsa-miR-361-5p SIP1 miRanda miRanda
14034 chr12 121659754 121659754 1 + C T STAD 121659767 + 121659747 121659787 41 TGATCCTCACCATGAACCAGACACAGGGCCTGTGCCCCGAG TGATCCTTACCATGAACCAGACACAGGGCCTGTGCCCCGAG < 41bp 1 0.407582012628251 1 0.838777661323547 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121659767 chr12:121659754 synonymous SNV . 0 hm6A_associated_SNPs_66103 0 0 1 1 121659739 121659761 mRNA hsa-miR-125a-3p P2RX4 miRanda miRanda
14034 chrX 135292049 135292049 1 + T C STAD 135292067 + 135292047 135292087 41 AGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTG AGCGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTG < 41bp 1 0.778114409816457 1 0.965644240379333 experiment 0.443771180367086 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 FHL1 ENSG00000022267 CDS Human protein_coding chrX:135292067 chrX:135292049 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_66148 0 0 1 1 135292044 135292067 mRNA hsa-miR-205 FHL1 miRanda miRanda
14034 chr5 56526980 56526980 1 + A G STAD 56526985 + 56526965 56527005 41 TGGAAGAAATGGTACAGAAAACATAAATCATCGAGGTGGAT TGGAAGAAATGGTACGGAAAACATAAATCATCGAGGTGGAT < 41bp 1 0.74057791696817 1 0.99031937122345 experiment 0.518844166063659 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 16 GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56526985 chr5:56526980 synonymous SNV . 0 hm6A_associated_SNPs_66168 0 0 1 1 56526961 56526983 mRNA hsa-miR-486-5p GPBP1 miRanda miRanda
14034 chr10 115668195 115668195 1 + G T STAD 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGACAGCATTGCTTGTATGATGA < 41bp 1 0.635743630903284 1 0.0767334401607513 experiment 0.728512738193431 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668195 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_66218 0 0 1 3 115668192 115668213 mRNA hsa-miR-205 NHLRC2 miRanda miRanda
14034 chr10 115668195 115668195 1 + G T STAD 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGACAGCATTGCTTGTATGATGA < 41bp 1 0.635743630903284 1 0.0767334401607513 experiment 0.728512738193431 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668195 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_66218 0 0 1 3 115668185 115668205 mRNA hsa-miR-381 NHLRC2 miRanda miRanda
14034 chr10 115668195 115668195 1 + G T STAD 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGACAGCATTGCTTGTATGATGA < 41bp 1 0.635743630903284 1 0.0767334401607513 experiment 0.728512738193431 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 27 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668195 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_66218 0 0 1 3 115668185 115668205 mRNA hsa-miR-300 NHLRC2 miRanda miRanda
14034 chr19 9453327 9453327 1 + G T STAD 9453331 + 9453311 9453351 41 CCTTTAAAAGTCACATGCAGACTCATCCTGGTGTAAAACCC CCTTTAAAAGTCACATTCAGACTCATCCTGGTGTAAAACCC < 41bp 1 0.310779606281872 1 0.989792227745056 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 17 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453331 chr19:9453327 nonsynonymous SNV 0.944 1 hm6A_associated_SNPs_66220 0 0 1 1 9453318 9453341 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 9453328 9453328 1 + C T STAD 9453331 + 9453311 9453351 41 CCTTTAAAAGTCACATGCAGACTCATCCTGGTGTAAAACCC CCTTTAAAAGTCACATGTAGACTCATCCTGGTGTAAAACCC < 41bp 1 0.347415657012048 1 0.984557747840881 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 18 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453331 chr19:9453328 stopgain 0.911 0 hm6A_associated_SNPs_66221 0 0 1 1 9453318 9453341 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr14 90509501 90509501 1 + C A STAD 90509521 + 90509501 90509541 41 CTGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA ATGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA < 41bp 1 0.592110022314833 1 0.22942978143692 experiment 0.815779955370335 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90509521 chr14:90509501 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_66255 0 0 1 6 90509488 90509507 mRNA hsa-miR-27a TDP1 miRanda miRanda
14034 chr14 90509501 90509501 1 + C A STAD 90509521 + 90509501 90509541 41 CTGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA ATGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA < 41bp 1 0.592110022314833 1 0.22942978143692 experiment 0.815779955370335 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90509521 chr14:90509501 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_66255 0 0 1 6 90509485 90509507 mRNA hsa-miR-27a TDP1 miRanda miRanda
14034 chr14 90509501 90509501 1 + C A STAD 90509521 + 90509501 90509541 41 CTGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA ATGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA < 41bp 1 0.592110022314833 1 0.22942978143692 experiment 0.815779955370335 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90509521 chr14:90509501 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_66255 0 0 1 6 90509488 90509507 mRNA hsa-miR-27b TDP1 miRanda miRanda
14034 chr14 90509501 90509501 1 + C A STAD 90509521 + 90509501 90509541 41 CTGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA ATGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA < 41bp 1 0.592110022314833 1 0.22942978143692 experiment 0.815779955370335 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90509521 chr14:90509501 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_66255 0 0 1 6 90509485 90509507 mRNA hsa-miR-27b TDP1 miRanda miRanda
14034 chr14 90509501 90509501 1 + C A STAD 90509521 + 90509501 90509541 41 CTGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA ATGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA < 41bp 1 0.592110022314833 1 0.22942978143692 experiment 0.815779955370335 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90509521 chr14:90509501 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_66255 0 0 1 6 90509488 90509506 mRNA hsa-miR-128 TDP1 miRanda miRanda
14034 chr14 90509501 90509501 1 + C A STAD 90509521 + 90509501 90509541 41 CTGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA ATGTGAAATTTAAGTGTAAGACATTGAGCCACAAACATGGA < 41bp 1 0.592110022314833 1 0.22942978143692 experiment 0.815779955370335 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90509521 chr14:90509501 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_66255 0 0 1 6 90509485 90509506 mRNA hsa-miR-128 TDP1 miRanda miRanda
14034 chrX 48759706 48759706 1 + C T STAD 48759702 + 48759682 48759722 41 AGACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAG AGACAGGGAACGGGATCGGGACCGTGGGTATGACAAGGCAG < 41bp 1 0.329297081014194 1 0.99050509929657 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759702 chrX:48759706 synonymous SNV . 0 hm6A_associated_SNPs_66260 1 0 1 1 48759701 48759725 mRNA hsa-miR-346 PQBP1 miRanda miRanda
14034 chrX 48759706 48759706 1 + C T STAD 48759714 + 48759694 48759734 41 GGATCGGGACCGCGGGTATGACAAGGCAGACCGGGAAGAGG GGATCGGGACCGTGGGTATGACAAGGCAGACCGGGAAGAGG < 41bp 1 0.592561823097531 1 0.964009702205658 experiment 0.814876353804938 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759714 chrX:48759706 synonymous SNV . 0 hm6A_associated_SNPs_66261 1 0 1 1 48759701 48759725 mRNA hsa-miR-346 PQBP1 miRanda miRanda
14034 chrX 48759706 48759706 1 + C T STAD 48759723 + 48759703 48759743 41 CCGCGGGTATGACAAGGCAGACCGGGAAGAGGGCAAAGAAC CCGTGGGTATGACAAGGCAGACCGGGAAGAGGGCAAAGAAC < 41bp 1 0.195396627085708 1 0.926406502723694 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759723 chrX:48759706 synonymous SNV . 0 hm6A_associated_SNPs_66262 1 0 1 1 48759701 48759725 mRNA hsa-miR-346 PQBP1 miRanda miRanda
14034 chr11 65270819 65270819 1 + T A STAD 65270826 + 65270806 65270846 41 AGCCTTTTTAAAATTGTAGGACTTGTTCCTGTGGGCTTCAG AGCCTTTTTAAAAATGTAGGACTTGTTCCTGTGGGCTTCAG < 41bp 1 0.0949819510572636 1 0.730903029441833 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 14 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270826 chr11:65270819 . . 0 hm6A_associated_SNPs_66278 0 0 1 1 65270817 65270837 lncRNA hsa-miR-873-5p MALAT1 miRanda starBase2
14034 chr9 106889742 106889742 1 + C A STAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACAACATCAGCAAACATAAACGGGAGGATGAAGA < 41bp 1 0.635244553393474 1 0.187682926654816 experiment 0.729510893213051 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889742 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_66286 0 0 1 3 106889735 106889756 mRNA hsa-miR-29a SMC2 miRanda miRanda
14034 chr9 106889742 106889742 1 + C A STAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACAACATCAGCAAACATAAACGGGAGGATGAAGA < 41bp 1 0.635244553393474 1 0.187682926654816 experiment 0.729510893213051 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889742 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_66286 0 0 1 3 106889734 106889756 mRNA hsa-miR-29b SMC2 miRanda miRanda
14034 chr9 106889742 106889742 1 + C A STAD 106889728 + 106889708 106889748 41 TTAGACCACAACATCAGCAAACATAAACGGGAGGCTGAAGA TTAGACCACAACATCAGCAAACATAAACGGGAGGATGAAGA < 41bp 1 0.635244553393474 1 0.187682926654816 experiment 0.729510893213051 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 SMC2 ENSG00000136824 CDS Human protein_coding chr9:106889728 chr9:106889742 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_66286 0 0 1 3 106889735 106889756 mRNA hsa-miR-29c SMC2 miRanda miRanda
14034 chr5 74011418 74011418 1 + A T STAD 74011401 + 74011381 74011421 41 GGACTCTTTTGGACCTATAAACCCTACTCTGAATACAACAT GGACTCTTTTGGACCTATAAACCCTACTCTGAATACATCAT < 41bp 1 0.199944547775516 1 0.0700342655181885 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 HEXB ENSG00000049860 CDS Human protein_coding chr5:74011401 chr5:74011418 nonsynonymous SNV 0.096 2 hm6A_associated_SNPs_66351 0 0 1 4 74011407 74011430 mRNA hsa-miR-320a HEXB miRanda miRanda
14034 chr5 74011418 74011418 1 + A T STAD 74011401 + 74011381 74011421 41 GGACTCTTTTGGACCTATAAACCCTACTCTGAATACAACAT GGACTCTTTTGGACCTATAAACCCTACTCTGAATACATCAT < 41bp 1 0.199944547775516 1 0.0700342655181885 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 HEXB ENSG00000049860 CDS Human protein_coding chr5:74011401 chr5:74011418 nonsynonymous SNV 0.096 2 hm6A_associated_SNPs_66351 0 0 1 4 74011407 74011430 mRNA hsa-miR-320b HEXB miRanda miRanda
14034 chr5 74011418 74011418 1 + A T STAD 74011401 + 74011381 74011421 41 GGACTCTTTTGGACCTATAAACCCTACTCTGAATACAACAT GGACTCTTTTGGACCTATAAACCCTACTCTGAATACATCAT < 41bp 1 0.199944547775516 1 0.0700342655181885 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 HEXB ENSG00000049860 CDS Human protein_coding chr5:74011401 chr5:74011418 nonsynonymous SNV 0.096 2 hm6A_associated_SNPs_66351 0 0 1 4 74011409 74011430 mRNA hsa-miR-320c HEXB miRanda miRanda
14034 chr5 74011418 74011418 1 + A T STAD 74011401 + 74011381 74011421 41 GGACTCTTTTGGACCTATAAACCCTACTCTGAATACAACAT GGACTCTTTTGGACCTATAAACCCTACTCTGAATACATCAT < 41bp 1 0.199944547775516 1 0.0700342655181885 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 HEXB ENSG00000049860 CDS Human protein_coding chr5:74011401 chr5:74011418 nonsynonymous SNV 0.096 2 hm6A_associated_SNPs_66351 0 0 1 4 74011410 74011430 mRNA hsa-miR-320d HEXB miRanda miRanda
14034 chr7 54636872 54636872 1 + C T STAD 54636859 + 54636839 54636879 41 CTGTAAAATCTACGGAGCGGACAGCAAAGTTGACCCTAAAC CTGTAAAATCTACGGAGCGGACAGCAAAGTTGATCCTAAAC < 41bp 1 0.749385039272459 1 0.969572722911835 experiment 0.501229921455082 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54636859 chr7:54636872 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_66373 0 0 0 1 54636853 54636873 mRNA hsa-miR-505 VSTM2A miRanda miRanda
14034 chr16 68598587 68598587 1 + C T STAD 68598595 + 68598575 68598615 41 AGAATTCATACTCGAAATAAACTCTAGGAACCGTGAAATTA AGAATTCATACTTGAAATAAACTCTAGGAACCGTGAAATTA < 41bp 1 0.758473545771708 1 0.999672651290894 experiment 0.483052908456584 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 13 ZFP90 ENSG00000184939 CDS Human protein_coding chr16:68598595 chr16:68598587 stopgain 0.843 0 hm6A_associated_SNPs_66438 0 0 0 1 68598586 68598605 mRNA hsa-miR-384 ZFP90 miRanda miRanda
14034 chr3 160132281 160132281 1 + A C STAD 160132272 + 160132252 160132292 41 GCCACGAGTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA GCCACGAGTAAAGCCAAAAAACTGGAGAACCAACTTCAAAA < 41bp 1 0.19566330737897 1 0.889334499835968 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132272 chr3:160132281 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_66458 0 0 1 2 160132274 160132294 mRNA hsa-miR-129-5p SMC4 miRanda miRanda
14034 chr3 160132281 160132281 1 + A C STAD 160132272 + 160132252 160132292 41 GCCACGAGTAAAGCCAAAAAACTGGAGAAACAACTTCAAAA GCCACGAGTAAAGCCAAAAAACTGGAGAACCAACTTCAAAA < 41bp 1 0.19566330737897 1 0.889334499835968 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 30 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160132272 chr3:160132281 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_66458 0 0 1 2 160132268 160132288 mRNA hsa-miR-382 SMC4 miRanda miRanda
14034 chr5 96101027 96101027 1 + A G STAD 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAGA < 41bp 1 0.145879613170706 1 0.838413834571838 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101027 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_66484 0 0 1 2 96101010 96101029 mRNA hsa-miR-211 CAST miRanda miRanda
14034 chr5 96101027 96101027 1 + A G STAD 96101008 + 96100988 96101028 41 CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAAA CCTGACCCAGATGAGAACAAACCAATGGAAGATAAAGTAGA < 41bp 1 0.145879613170706 1 0.838413834571838 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 40 CAST ENSG00000153113 CDS Human protein_coding chr5:96101008 chr5:96101027 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_66484 0 0 1 2 96101009 96101029 mRNA hsa-miR-486-5p CAST miRanda miRanda
14034 chr17 56772408 56772408 1 + C T STAD 56772413 + 56772393 56772433 41 AAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC AAGAAGTGTACAGCATTGGAACTTCTTGAGCAGGAGCATAC < 41bp 1 0.65691506623022 1 0.763070344924927 experiment 0.68616986753956 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772413 chr17:56772408 synonymous SNV . 0 hm6A_associated_SNPs_66491 2 0 1 3 56772389 56772412 mRNA hsa-miR-199a-5p RAD51C miRanda miRanda
14034 chr17 56772408 56772408 1 + C T STAD 56772413 + 56772393 56772433 41 AAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC AAGAAGTGTACAGCATTGGAACTTCTTGAGCAGGAGCATAC < 41bp 1 0.65691506623022 1 0.763070344924927 experiment 0.68616986753956 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772413 chr17:56772408 synonymous SNV . 0 hm6A_associated_SNPs_66491 2 0 1 3 56772389 56772412 mRNA hsa-miR-199b-5p RAD51C miRanda miRanda
14034 chr17 56772408 56772408 1 + C T STAD 56772413 + 56772393 56772433 41 AAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATAC AAGAAGTGTACAGCATTGGAACTTCTTGAGCAGGAGCATAC < 41bp 1 0.65691506623022 1 0.763070344924927 experiment 0.68616986753956 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772413 chr17:56772408 synonymous SNV . 0 hm6A_associated_SNPs_66491 2 0 1 3 56772406 56772427 mRNA hsa-miR-370 RAD51C miRanda miRanda
14034 chr18 2732472 2732472 1 + T G STAD 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATCAGCGTTAGCAGAAAAA < 41bp 1 0.500204787631511 1 0.0720919370651245 experiment 0.999590424736978 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732472 synonymous SNV . 0 hm6A_associated_SNPs_66493 0 0 1 4 2732453 2732475 mRNA hsa-miR-320a SMCHD1 miRanda miRanda
14034 chr18 2732472 2732472 1 + T G STAD 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATCAGCGTTAGCAGAAAAA < 41bp 1 0.500204787631511 1 0.0720919370651245 experiment 0.999590424736978 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732472 synonymous SNV . 0 hm6A_associated_SNPs_66493 0 0 1 4 2732453 2732475 mRNA hsa-miR-320b SMCHD1 miRanda miRanda
14034 chr18 2732472 2732472 1 + T G STAD 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATCAGCGTTAGCAGAAAAA < 41bp 1 0.500204787631511 1 0.0720919370651245 experiment 0.999590424736978 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732472 synonymous SNV . 0 hm6A_associated_SNPs_66493 0 0 1 4 2732455 2732475 mRNA hsa-miR-320c SMCHD1 miRanda miRanda
14034 chr18 2732472 2732472 1 + T G STAD 2732464 + 2732444 2732484 41 GAGAAAGAGAAATCAATATAACATCAGCTTTAGCAGAAAAA GAGAAAGAGAAATCAATATAACATCAGCGTTAGCAGAAAAA < 41bp 1 0.500204787631511 1 0.0720919370651245 experiment 0.999590424736978 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2732464 chr18:2732472 synonymous SNV . 0 hm6A_associated_SNPs_66493 0 0 1 4 2732456 2732475 mRNA hsa-miR-320d SMCHD1 miRanda miRanda
14034 chr13 73369613 73369613 1 + G A STAD 73369627 + 73369607 73369647 41 ACCTGCGTGACTTTGAGTTGACAGAAGAGCAATATATTAAA ACCTGCATGACTTTGAGTTGACAGAAGAGCAATATATTAAA < 41bp 1 0.300291022181384 1 0.542715132236481 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 7 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73369627 chr13:73369613 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_66505 0 0 1 1 73369601 73369620 mRNA hsa-miR-224 PIBF1 miRanda miRanda
14034 chr11 837509 837509 1 + G C STAD 837491 + 837471 837511 41 TGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTGGA TGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTCGA < 41bp 1 0.40475992794852 1 0.994279026985168 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 39 CD151 ENSG00000177697 CDS Human protein_coding chr11:837491 chr11:837509 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_66519 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chr11 837509 837509 1 + G C STAD 837500 + 837480 837520 41 CAACTCACAGGACTGGCGAGACAGTGAGTGGATCCGCTCAC CAACTCACAGGACTGGCGAGACAGTGAGTCGATCCGCTCAC < 41bp 1 0.477709392017675 1 0.979657709598541 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 30 CD151 ENSG00000177697 CDS Human protein_coding chr11:837500 chr11:837509 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_66520 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chr5 172377768 172377768 1 + C T STAD 172377758 + 172377738 172377778 41 CACCGTCGCCGGCATCCTGGACTCATGCATCTTCACAGCCT CACCGTCGCCGGCATCCTGGACTCATGCATTTTCACAGCCT < 41bp 1 0.799775234073335 1 0.984703302383423 experiment 0.400449531853331 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172377758 chr5:172377768 synonymous SNV . 0 hm6A_associated_SNPs_66550 0 0 1 1 172377760 172377780 mRNA hsa-miR-485-5p ERGIC1 miRanda miRanda
14034 chr8 96057794 96057794 1 + G A STAD 96057789 + 96057769 96057809 41 GTAGGAAAAAAATCTGGATGACAAAGCATATCGTAATATCA GTAGGAAAAAAATCTGGATGACAAAACATATCGTAATATCA < 41bp 1 0.646564442996961 1 0.877347946166992 experiment 0.706871114006079 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control 26 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96057789 chr8:96057794 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_66551 0 0 1 2 96057780 96057801 mRNA hsa-miR-190 C8orf38 miRanda miRanda
14034 chr8 96057794 96057794 1 + G A STAD 96057789 + 96057769 96057809 41 GTAGGAAAAAAATCTGGATGACAAAGCATATCGTAATATCA GTAGGAAAAAAATCTGGATGACAAAACATATCGTAATATCA < 41bp 1 0.646564442996961 1 0.877347946166992 experiment 0.706871114006079 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control 26 NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96057789 chr8:96057794 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_66551 0 0 1 2 96057780 96057801 mRNA hsa-miR-190b C8orf38 miRanda miRanda
14034 chrX 74520740 74520740 1 + A G STAD 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTGTAGAACATGGAGTTCAACCCAGTGT < 41bp 1 0.745436104630842 1 0.0720033943653107 experiment 0.509127790738315 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520740 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_66592 0 0 0 1 74520730 74520752 mRNA hsa-miR-145 UPRT miRanda miRanda
14034 chr10 89487166 89487166 1 + G A STAD 89487180 + 89487160 89487200 41 CGAGACGCTGAATTCTATGAACACAGAAAAGAGGAACGCTG CGAGACACTGAATTCTATGAACACAGAAAAGAGGAACGCTG < 41bp 1 0.47536726997913 1 0.0350013971328735 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89487180 chr10:89487166 nonsynonymous SNV 0.282 2 hm6A_associated_SNPs_66603 0 0 0 2 89487160 89487180 mRNA hsa-miR-376a PAPSS2 miRanda miRanda
14034 chr10 89487166 89487166 1 + G A STAD 89487180 + 89487160 89487200 41 CGAGACGCTGAATTCTATGAACACAGAAAAGAGGAACGCTG CGAGACACTGAATTCTATGAACACAGAAAAGAGGAACGCTG < 41bp 1 0.47536726997913 1 0.0350013971328735 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89487180 chr10:89487166 nonsynonymous SNV 0.282 2 hm6A_associated_SNPs_66603 0 0 0 2 89487159 89487180 mRNA hsa-miR-376b PAPSS2 miRanda miRanda
14034 chr11 107959318 107959318 1 + T C STAD 107959313 + 107959293 107959333 41 GCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC GCTGCTTGCCAATTACTGTGACATGCTGCTAAGAAAAACAC < 41bp 1 0.698941654155263 1 0.399383425712585 experiment 0.602116691689474 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959313 chr11:107959318 synonymous SNV . 0 hm6A_associated_SNPs_66627 0 0 1 3 107959299 107959320 mRNA hsa-miR-132 CUL5 miRanda miRanda
14034 chr11 107959318 107959318 1 + T C STAD 107959313 + 107959293 107959333 41 GCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC GCTGCTTGCCAATTACTGTGACATGCTGCTAAGAAAAACAC < 41bp 1 0.698941654155263 1 0.399383425712585 experiment 0.602116691689474 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959313 chr11:107959318 synonymous SNV . 0 hm6A_associated_SNPs_66627 0 0 1 3 107959296 107959319 mRNA hsa-miR-181d CUL5 miRanda miRanda
14034 chr11 107959318 107959318 1 + T C STAD 107959313 + 107959293 107959333 41 GCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACAC GCTGCTTGCCAATTACTGTGACATGCTGCTAAGAAAAACAC < 41bp 1 0.698941654155263 1 0.399383425712585 experiment 0.602116691689474 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959313 chr11:107959318 synonymous SNV . 0 hm6A_associated_SNPs_66627 0 0 1 3 107959298 107959320 mRNA hsa-miR-543 CUL5 miRanda miRanda
14034 chr11 107959318 107959318 1 + T C STAD 107959330 + 107959310 107959350 41 GTGACATGTTGCTAAGAAAAACACCATTAAGCAAAAAACTA GTGACATGCTGCTAAGAAAAACACCATTAAGCAAAAAACTA < 41bp 1 0.656323841420561 1 0.102580934762955 experiment 0.687352317158878 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959330 chr11:107959318 synonymous SNV . 0 hm6A_associated_SNPs_66628 0 0 1 3 107959299 107959320 mRNA hsa-miR-132 CUL5 miRanda miRanda
14034 chr11 107959318 107959318 1 + T C STAD 107959330 + 107959310 107959350 41 GTGACATGTTGCTAAGAAAAACACCATTAAGCAAAAAACTA GTGACATGCTGCTAAGAAAAACACCATTAAGCAAAAAACTA < 41bp 1 0.656323841420561 1 0.102580934762955 experiment 0.687352317158878 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959330 chr11:107959318 synonymous SNV . 0 hm6A_associated_SNPs_66628 0 0 1 3 107959296 107959319 mRNA hsa-miR-181d CUL5 miRanda miRanda
14034 chr11 107959318 107959318 1 + T C STAD 107959330 + 107959310 107959350 41 GTGACATGTTGCTAAGAAAAACACCATTAAGCAAAAAACTA GTGACATGCTGCTAAGAAAAACACCATTAAGCAAAAAACTA < 41bp 1 0.656323841420561 1 0.102580934762955 experiment 0.687352317158878 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107959330 chr11:107959318 synonymous SNV . 0 hm6A_associated_SNPs_66628 0 0 1 3 107959298 107959320 mRNA hsa-miR-543 CUL5 miRanda miRanda
14034 chr3 186504931 186504931 1 + A G STAD 186504941 + 186504921 186504961 41 GAAGTTGGATACACTTTGTGACTTGTACGAGACACTGACCA GAAGTTGGATGCACTTTGTGACTTGTACGAGACACTGACCA < 41bp 1 0.351658885252828 1 0.861051082611084 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186504941 chr3:186504931 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_66663 0 0 1 1 186504924 186504945 mRNA hsa-miR-224 EIF4A2 miRanda miRanda
14034 chr11 35211585 35211585 1 + G A STAD 35211568 + 35211548 35211588 41 ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACA ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCAACA < 41bp 1 0.516798544724205 1 0.973369598388672 experiment 0.966402910551589 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 38 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211568 chr11:35211585 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_66664 0 0 1 2 35211568 35211594 mRNA hsa-miR-210 CD44 miRanda miRanda
14034 chr11 35211585 35211585 1 + G A STAD 35211568 + 35211548 35211588 41 ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACA ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCAACA < 41bp 1 0.516798544724205 1 0.973369598388672 experiment 0.966402910551589 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 38 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211568 chr11:35211585 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_66664 0 0 1 2 35211576 35211597 mRNA hsa-miR-431 CD44 miRanda miRanda
14034 chr11 35211585 35211585 1 + G A STAD 35211595 + 35211575 35211615 41 CTGGATCACCGACAGCACAGACAGAATCCCTGCTACCAGTA CTGGATCACCAACAGCACAGACAGAATCCCTGCTACCAGTA < 41bp 1 0.254628669367578 1 0.992738366127014 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211595 chr11:35211585 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_66665 0 0 1 2 35211568 35211594 mRNA hsa-miR-210 CD44 miRanda miRanda
14034 chr11 35211585 35211585 1 + G A STAD 35211595 + 35211575 35211615 41 CTGGATCACCGACAGCACAGACAGAATCCCTGCTACCAGTA CTGGATCACCAACAGCACAGACAGAATCCCTGCTACCAGTA < 41bp 1 0.254628669367578 1 0.992738366127014 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211595 chr11:35211585 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_66665 0 0 1 2 35211576 35211597 mRNA hsa-miR-431 CD44 miRanda miRanda
14034 chr20 3897602 3897602 1 + C T STAD 3897582 + 3897562 3897602 41 CCCCCATCACAGCTTTGGAAACATGATGAGCAAGGAGAAGC CCCCCATCACAGCTTTGGAAACATGATGAGCAAGGAGAAGT < 41bp 1 0.627843919775733 1 0.911083459854126 experiment 0.744312160448534 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 PANK2 ENSG00000125779 CDS Human protein_coding chr20:3897582 chr20:3897602 stopgain 0.996 1 hm6A_associated_SNPs_66764 1 0 1 1 3897599 3897625 mRNA hsa-miR-211 PANK2 miRanda miRanda
14034 chr1 170508634 170508634 1 + C A STAD 170508622 + 170508602 170508642 41 AGTCAGCCAAAGGAACTGGGACTTGAGAATTCCCATGATGG AGTCAGCCAAAGGAACTGGGACTTGAGAATTCACATGATGG < 41bp 1 0.466006539772909 1 0.997727513313293 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 GORAB ENSG00000120370 CDS Human protein_coding chr1:170508622 chr1:170508634 synonymous SNV . 0 hm6A_associated_SNPs_66769 0 0 0 1 170508628 170508649 mRNA hsa-miR-758 GORAB miRanda miRanda
14034 chr9 32418455 32418455 1 + G A STAD 32418447 + 32418427 32418467 41 GGATGGATATTATTACCCAGACAGCCTCGTGGGCACAGACT GGATGGATATTATTACCCAGACAGCCTCATGGGCACAGACT < 41bp 1 0.561647457532457 1 0.0189685821533203 experiment 0.876705084935086 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 29 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32418447 chr9:32418455 nonsynonymous SNV 0.993 4 hm6A_associated_SNPs_66772 0 0 1 1 32418431 32418455 mRNA hsa-miR-485-5p ACO1 miRanda miRanda
14034 chr14 95081072 95081072 1 + G A STAD 95081067 + 95081047 95081087 41 GGGCCCATAATACCACCCTGACAGAGATTCTCAAAGGCCTC GGGCCCATAATACCACCCTGACAGAAATTCTCAAAGGCCTC < 41bp 1 0.35293681658081 1 0.987829208374023 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 26 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081067 chr14:95081072 synonymous SNV . 0 hm6A_associated_SNPs_66773 0 0 1 1 95081054 95081076 mRNA hsa-miR-216b SERPINA3 miRanda miRanda
14034 chr9 139564459 139564459 1 + C T STAD 139564447 + 139564427 139564467 41 CCCTGCAGGATGGCGGGGTGACACTTGCCAGTCAGGTGAGG CCCTGCAGGATGGCGGGGTGACACTTGCCAGTTAGGTGAGG < 41bp 1 0.213798762811972 1 0.70521879196167 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139564447 chr9:139564459 nonsynonymous SNV 0.981 0 hm6A_associated_SNPs_66789 0 0 0 1 139564453 139564461 mRNA hsa-miR-217 EGFL7 miRanda miRanda
14034 chrX 103220136 103220136 1 + T C STAD 103220141 + 103220121 103220161 41 AGGAGAAAGAGTGTGTTCAAACATCATAAAATGGGGATCTC AGGAGAAAGAGTGTGCTCAAACATCATAAAATGGGGATCTC < 41bp 1 0.621427319293579 1 0.0104210674762726 experiment 0.757145361412843 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 16 TMSB15B ENSG00000158427 CDS Human protein_coding chrX:103220141 chrX:103220136 nonsynonymous SNV 0.008 0 hm6A_associated_SNPs_66809 0 0 0 1 103220122 103220144 mRNA hsa-miR-653 TMSB15B miRanda miRanda
14034 chr9 35661184 35661184 1 - A G STAD 35661172 - 35661152 35661192 41 GCACTCCATCATGAAAACAGACTTTGTTTTAGTCGACCTTC GCACTCCACCATGAAAACAGACTTTGTTTTAGTCGACCTTC < 41bp 1 0.619391762311082 1 0.915659546852112 experiment 0.761216475377836 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661172 chr9:35661184 stoploss 0.119 0 hm6A_associated_SNPs_66817 0 0 0 2 35661168 35661192 mRNA hsa-miR-382 C9orf100 miRanda miRanda
14034 chr9 35661184 35661184 1 - A G STAD 35661172 - 35661152 35661192 41 GCACTCCATCATGAAAACAGACTTTGTTTTAGTCGACCTTC GCACTCCACCATGAAAACAGACTTTGTTTTAGTCGACCTTC < 41bp 1 0.619391762311082 1 0.915659546852112 experiment 0.761216475377836 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661172 chr9:35661184 stoploss 0.119 0 hm6A_associated_SNPs_66817 0 0 0 2 35661178 35661202 mRNA hsa-miR-433 C9orf100 miRanda miRanda
14034 chr2 157425876 157425876 1 + T C STAD 157425886 + 157425866 157425906 41 TCTTTATAGGTGGAAAGTGGACAACTTATCGGTCTATGGCA TCTTTATAGGCGGAAAGTGGACAACTTATCGGTCTATGGCA < 41bp 1 0.457691367696731 1 0.887974619865417 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 GPD2 ENSG00000115159 CDS Human protein_coding chr2:157425886 chr2:157425876 synonymous SNV . 0 hm6A_associated_SNPs_66845 0 0 0 2 157425875 157425887 mRNA hsa-miR-204 GPD2 miRanda miRanda
14034 chr2 157425876 157425876 1 + T C STAD 157425886 + 157425866 157425906 41 TCTTTATAGGTGGAAAGTGGACAACTTATCGGTCTATGGCA TCTTTATAGGCGGAAAGTGGACAACTTATCGGTCTATGGCA < 41bp 1 0.457691367696731 1 0.887974619865417 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 GPD2 ENSG00000115159 CDS Human protein_coding chr2:157425886 chr2:157425876 synonymous SNV . 0 hm6A_associated_SNPs_66845 0 0 0 2 157425875 157425893 mRNA hsa-miR-382 GPD2 miRanda miRanda
14034 chr19 9453044 9453044 1 + T G STAD 9453060 + 9453040 9453080 41 GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT GAATGTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT < 41bp 1 0.464697254907825 1 0.984882354736328 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 5 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453060 chr19:9453044 nonsynonymous SNV 0.939 3 hm6A_associated_SNPs_66862 0 0 1 1 9453036 9453057 mRNA hsa-miR-539 ZNF559 miRanda miRanda
14034 chr1 40525076 40525076 1 + G A STAD 40525095 + 40525075 40525115 41 GGCAGTATCTCATACCTCTGACATGCACCGTGGGTATGCAG GACAGTATCTCATACCTCTGACATGCACCGTGGGTATGCAG < 41bp 1 0.743077258420981 1 0.0480071008205414 experiment 0.513845483158038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525095 chr1:40525076 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_66910 0 0 1 2 40525065 40525086 mRNA hsa-miR-146a CAP1 miRanda miRanda
14034 chr1 40525076 40525076 1 + G A STAD 40525095 + 40525075 40525115 41 GGCAGTATCTCATACCTCTGACATGCACCGTGGGTATGCAG GACAGTATCTCATACCTCTGACATGCACCGTGGGTATGCAG < 41bp 1 0.743077258420981 1 0.0480071008205414 experiment 0.513845483158038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525095 chr1:40525076 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_66910 0 0 1 2 40525074 40525093 mRNA hsa-miR-202 CAP1 miRanda miRanda
14034 chr2 149227818 149227818 1 + T C STAD 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CGTGCACTGCCACAATGCAAACACTAACTTTGCTCACAGTA < 41bp 1 0.697689296709284 1 0.884467363357544 experiment 0.604621406581433 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227818 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_66945 0 0 0 2 149227816 149227836 mRNA hsa-miR-378 MBD5 miRanda miRanda
14034 chr2 149227818 149227818 1 + T C STAD 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CGTGCACTGCCACAATGCAAACACTAACTTTGCTCACAGTA < 41bp 1 0.697689296709284 1 0.884467363357544 experiment 0.604621406581433 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227818 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_66945 0 0 0 2 149227813 149227836 mRNA hsa-miR-422a MBD5 miRanda miRanda
14034 chr7 23235463 23235463 1 + A G STAD 23235467 + 23235447 23235487 41 CCTCACTTCAGGTTTTACAGACATTTCACCAGAGGAATTGA CCTCACTTCAGGTTTTGCAGACATTTCACCAGAGGAATTGA < 41bp 1 0.717562152919039 1 0.0610434412956238 experiment 0.564875694161923 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 17 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23235467 chr7:23235463 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_66998 0 0 1 1 23235458 23235475 mRNA hsa-miR-203 NUPL2 miRanda miRanda
14034 chr3 10114614 10114614 1 + C T STAD 10114599 + 10114579 10114619 41 TTGGAAACTTTGATGTGGAAACTTTAGATATAACACCTCAT TTGGAAACTTTGATGTGGAAACTTTAGATATAACATCTCAT < 41bp 1 0.260394981727052 1 0.0183060169219971 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10114599 chr3:10114614 nonsynonymous SNV 0.426 2 hm6A_associated_SNPs_67027 0 0 1 2 10114605 10114625 mRNA hsa-miR-144 FANCD2 miRanda miRanda
14034 chr3 10114614 10114614 1 + C T STAD 10114599 + 10114579 10114619 41 TTGGAAACTTTGATGTGGAAACTTTAGATATAACACCTCAT TTGGAAACTTTGATGTGGAAACTTTAGATATAACATCTCAT < 41bp 1 0.260394981727052 1 0.0183060169219971 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10114599 chr3:10114614 nonsynonymous SNV 0.426 2 hm6A_associated_SNPs_67027 0 0 1 2 10114607 10114628 mRNA hsa-miR-194 FANCD2 miRanda miRanda
14034 chr3 10114614 10114614 1 + C T STAD 10114611 + 10114591 10114631 41 ATGTGGAAACTTTAGATATAACACCTCATACTGTTACTGCT ATGTGGAAACTTTAGATATAACATCTCATACTGTTACTGCT < 41bp 1 0.634547565962106 1 0.016187846660614 experiment 0.730904868075787 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10114611 chr3:10114614 nonsynonymous SNV 0.426 2 hm6A_associated_SNPs_67028 0 0 1 2 10114605 10114625 mRNA hsa-miR-144 FANCD2 miRanda miRanda
14034 chr3 10114614 10114614 1 + C T STAD 10114611 + 10114591 10114631 41 ATGTGGAAACTTTAGATATAACACCTCATACTGTTACTGCT ATGTGGAAACTTTAGATATAACATCTCATACTGTTACTGCT < 41bp 1 0.634547565962106 1 0.016187846660614 experiment 0.730904868075787 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10114611 chr3:10114614 nonsynonymous SNV 0.426 2 hm6A_associated_SNPs_67028 0 0 1 2 10114607 10114628 mRNA hsa-miR-194 FANCD2 miRanda miRanda
14034 chr20 60737941 60737941 1 + C T STAD 60737960 + 60737940 60737980 41 TCGGCAACTACGTGTCTCGGACCAACATCAACATGCAGTCC TTGGCAACTACGTGTCTCGGACCAACATCAACATGCAGTCC < 41bp 1 0.139989474401811 1 0.621786892414093 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 SS18L1 ENSG00000184402 CDS Human protein_coding chr20:60737960 chr20:60737941 synonymous SNV . 0 hm6A_associated_SNPs_67031 0 0 1 1 60737919 60737941 mRNA hsa-miR-455-5p SS18L1 miRanda miRanda
14034 chr19 50906824 50906824 1 + G A STAD 50906811 + 50906791 50906831 41 CACCGGTTACAACATCCAGAACTTCGACCTTCCGTACCTCA CACCGGTTACAACATCCAGAACTTCGACCTTCCATACCTCA < 41bp 1 0.259809012784187 1 0.876441538333893 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906811 chr19:50906824 synonymous SNV . 0 hm6A_associated_SNPs_67035 2 0 1 1 50906808 50906831 mRNA hsa-miR-98 POLD1 miRanda miRanda
14034 chr16 48368167 48368167 1 + T C STAD 48368175 + 48368155 48368195 41 AAAACCTGAATCTATCAGTGACACTACTGACTTGGCTCTAC AAAACCTGAATCCATCAGTGACACTACTGACTTGGCTCTAC < 41bp 1 0.622203181808665 1 0.747992217540741 experiment 0.755593636382671 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 13 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48368175 chr16:48368167 synonymous SNV . 0 hm6A_associated_SNPs_67049 0 0 0 1 48368160 48368182 mRNA hsa-miR-142-3p LONP2 miRanda miRanda
14034 chr2 33012179 33012179 1 + G A STAD 33012197 + 33012177 33012217 41 CCGGCTCTTGGACTTACGTGACAAATACAAAGATGTTCAGG CCAGCTCTTGGACTTACGTGACAAATACAAAGATGTTCAGG < 41bp 1 0.468182184909144 1 0.437023729085922 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 3 TTC27 ENSG00000018699 CDS Human protein_coding chr2:33012197 chr2:33012179 nonsynonymous SNV 0.995 2 hm6A_associated_SNPs_67080 0 0 1 1 33012165 33012187 mRNA hsa-miR-335 TTC27 miRanda miRanda
14034 chr22 41320425 41320425 1 + C G STAD 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCGGGATGGATGTCCATGAGACTCCAGACATGCCCCGTT Direct Loss 1 0.474238324982468 1 0.0102972984313965 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 22 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320425 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_67118 0 0 0 1 41320412 41320431 mRNA hsa-miR-122 XPNPEP3 miRanda miRanda
14034 chr12 69981972 69981972 1 + A G STAD 69981969 + 69981949 69981989 41 CAAAAAAGATTCATCCACAGACCATCATAGCGGGTTGGAGA CAAAAAAGATTCATCCACAGACCGTCATAGCGGGTTGGAGA < 41bp 1 0.229584302766198 1 0.822378039360046 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 24 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69981969 chr12:69981972 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_67160 0 0 1 1 69981968 69981991 mRNA hsa-miR-150 CCT2 miRanda miRanda
14034 chr20 57566425 57566425 1 + G A STAD 57566414 + 57566394 57566434 41 TTCATGCAGTCACTCTTTAAACCAGGGGCTCGGATCAACCA TTCATGCAGTCACTCTTTAAACCAGGGGCTCAGATCAACCA < 41bp 1 0.383233667832747 1 0.89927875995636 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57566414 chr20:57566425 nonsynonymous SNV 0.422 1 hm6A_associated_SNPs_67166 0 0 1 1 57566405 57566427 mRNA hsa-miR-615-3p TH1L miRanda miRanda
14034 chr11 125514441 125514441 1 + G A STAD 125514437 + 125514417 125514457 41 AGCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTG AGCGGTTGGTCAAAAGAATGACACAATTCTTTACCAAATTG < 41bp 1 0.53713840812136 1 0.326950430870056 experiment 0.925723183757279 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514437 chr11:125514441 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_67178 0 0 1 3 125514418 125514442 mRNA hsa-miR-187 CHEK1 miRanda miRanda
14034 chr11 125514441 125514441 1 + G A STAD 125514437 + 125514417 125514457 41 AGCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTG AGCGGTTGGTCAAAAGAATGACACAATTCTTTACCAAATTG < 41bp 1 0.53713840812136 1 0.326950430870056 experiment 0.925723183757279 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514437 chr11:125514441 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_67178 0 0 1 3 125514423 125514449 mRNA hsa-miR-186 CHEK1 miRanda miRanda
14034 chr11 125514441 125514441 1 + G A STAD 125514437 + 125514417 125514457 41 AGCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTG AGCGGTTGGTCAAAAGAATGACACAATTCTTTACCAAATTG < 41bp 1 0.53713840812136 1 0.326950430870056 experiment 0.925723183757279 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514437 chr11:125514441 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_67178 0 0 1 3 125514441 125514463 mRNA hsa-miR-324-5p CHEK1 miRanda miRanda
14034 chr11 86048522 86048522 1 + C T STAD 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAGTAGACTC < 41bp 1 0.604947023518618 1 0.0328228771686554 experiment 0.790105952962764 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048522 stopgain 1.000 1 hm6A_associated_SNPs_67203 0 0 1 4 86048520 86048546 mRNA hsa-miR-15a C11orf73 miRanda miRanda
14034 chr11 86048522 86048522 1 + C T STAD 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAGTAGACTC < 41bp 1 0.604947023518618 1 0.0328228771686554 experiment 0.790105952962764 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048522 stopgain 1.000 1 hm6A_associated_SNPs_67203 0 0 1 4 86048507 86048531 mRNA hsa-miR-28-5p C11orf73 miRanda miRanda
14034 chr11 86048522 86048522 1 + C T STAD 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAGTAGACTC < 41bp 1 0.604947023518618 1 0.0328228771686554 experiment 0.790105952962764 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048522 stopgain 1.000 1 hm6A_associated_SNPs_67203 0 0 1 4 86048521 86048545 mRNA hsa-miR-103 C11orf73 miRanda miRanda
14034 chr11 86048522 86048522 1 + C T STAD 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGGCTCAGTAGACTC < 41bp 1 0.604947023518618 1 0.0328228771686554 experiment 0.790105952962764 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048522 stopgain 1.000 1 hm6A_associated_SNPs_67203 0 0 1 4 86048521 86048545 mRNA hsa-miR-107 C11orf73 miRanda miRanda
14034 chr13 73396078 73396078 1 + A G STAD 73396060 + 73396040 73396080 41 TTTGGCCTTAGAATTAGCAGACACAAAACAGTTAATTCAGC TTTGGCCTTAGAATTAGCAGACACAAAACAGTTAATTCGGC < 41bp 1 0.456258020165623 1 0.913253843784332 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73396060 chr13:73396078 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_67213 0 0 1 1 73396075 73396096 mRNA hsa-let-7i PIBF1 miRanda miRanda
14034 chr6 7601616 7601616 1 + T G STAD 7601631 + 7601611 7601651 41 AACGGTTTGTTTGTGATCTAACTCAAGCTGATCGTCTTGCC AACGGGTTGTTTGTGATCTAACTCAAGCTGATCGTCTTGCC < 41bp 1 0.407753776884331 1 0.69077455997467 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7601631 chr6:7601616 nonsynonymous SNV 0.921 0 hm6A_associated_SNPs_67303 0 0 1 1 7601597 7601618 mRNA hsa-miR-451 SNRNP48 miRanda miRanda
14034 chr8 68005795 68005795 1 + A T STAD 68005800 + 68005780 68005820 41 AAGGTTGAAACTTGAACGTAACAAAGAATACAATCAGTTTC AAGGTTGAAACTTGATCGTAACAAAGAATACAATCAGTTTC < 41bp 1 0.424599826415234 1 0.315197587013245 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68005800 chr8:68005795 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67310 0 0 1 1 68005782 68005804 mRNA hsa-miR-375 CSPP1 miRanda miRanda
14034 chr4 76442037 76442037 1 + G C STAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTCATGTGAATGCAGCCGG < 41bp 1 0.397032620877437 1 0.435473620891571 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442037 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_67335 0 0 1 5 76442026 76442044 mRNA hsa-miR-23a THAP6 miRanda miRanda
14034 chr4 76442037 76442037 1 + G C STAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTCATGTGAATGCAGCCGG < 41bp 1 0.397032620877437 1 0.435473620891571 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442037 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_67335 0 0 1 5 76442018 76442039 mRNA hsa-miR-26a THAP6 miRanda miRanda
14034 chr4 76442037 76442037 1 + G C STAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTCATGTGAATGCAGCCGG < 41bp 1 0.397032620877437 1 0.435473620891571 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442037 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_67335 0 0 1 5 76442019 76442039 mRNA hsa-miR-26b THAP6 miRanda miRanda
14034 chr4 76442037 76442037 1 + G C STAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTCATGTGAATGCAGCCGG < 41bp 1 0.397032620877437 1 0.435473620891571 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442037 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_67335 0 0 1 5 76442024 76442044 mRNA hsa-miR-23b THAP6 miRanda miRanda
14034 chr4 76442037 76442037 1 + G C STAD 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTCATGTGAATGCAGCCGG < 41bp 1 0.397032620877437 1 0.435473620891571 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442037 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_67335 0 0 1 5 76442023 76442039 mRNA hsa-miR-1297 THAP6 miRanda miRanda
14034 chr2 66775109 66775109 1 + T C STAD 66775118 + 66775098 66775138 41 GAAAAAGCAGTTGGCACAAGACACGGGACTCACCATCCTTC GAAAAAGCAGTCGGCACAAGACACGGGACTCACCATCCTTC < 41bp 1 0.305743658223002 1 0.687680780887604 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66775118 chr2:66775109 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_67349 0 0 0 1 66775101 66775123 mRNA hsa-miR-187 MEIS1 miRanda miRanda
14034 chr12 107237716 107237716 1 + C T STAD 107237700 + 107237680 107237720 41 ATGTTCCCGAGCCCATCGAAACATCCGAAAATTTCTCAAAG ATGTTCCCGAGCCCATCGAAACATCCGAAAATTTCTTAAAG < 41bp 1 0.480015749764579 1 0.00659051537513733 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 RIC8B ENSG00000111785 CDS Human protein_coding chr12:107237700 chr12:107237716 synonymous SNV . 0 hm6A_associated_SNPs_67359 0 0 0 1 107237698 107237717 mRNA hsa-miR-539 RIC8B miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGGCA < 41bp 1 0.778803711982529 1 0.571460068225861 experiment 0.442392576034942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67393 0 0 1 7 222906025 222906046 mRNA hsa-miR-29a C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGGCA < 41bp 1 0.778803711982529 1 0.571460068225861 experiment 0.442392576034942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67393 0 0 1 7 222906024 222906046 mRNA hsa-miR-29b C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGGCA < 41bp 1 0.778803711982529 1 0.571460068225861 experiment 0.442392576034942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67393 0 0 1 7 222906019 222906041 mRNA hsa-miR-199a-5p C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGGCA < 41bp 1 0.778803711982529 1 0.571460068225861 experiment 0.442392576034942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67393 0 0 1 7 222906019 222906041 mRNA hsa-miR-199b-5p C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGGCA < 41bp 1 0.778803711982529 1 0.571460068225861 experiment 0.442392576034942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67393 0 0 1 7 222906031 222906054 mRNA hsa-miR-122 C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGGCA < 41bp 1 0.778803711982529 1 0.571460068225861 experiment 0.442392576034942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67393 0 0 1 7 222906034 222906053 mRNA hsa-miR-143 C1orf58 miRanda miRanda
14034 chr1 222906034 222906034 1 + A G STAD 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGGCA < 41bp 1 0.778803711982529 1 0.571460068225861 experiment 0.442392576034942 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 39 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906034 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67393 0 0 1 7 222906025 222906046 mRNA hsa-miR-29c C1orf58 miRanda miRanda
14034 chr20 39709828 39709828 1 + T A STAD 39709833 + 39709813 39709853 41 ATAAACCTAAGAAAATTAAAACAGAAGATACCAAGAAGGAG ATAAACCTAAGAAAAATAAAACAGAAGATACCAAGAAGGAG < 41bp 1 0.508498987485763 1 0.397596657276154 experiment 0.983002025028473 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 16 TOP1 ENSG00000198900 CDS Human protein_coding chr20:39709833 chr20:39709828 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_67399 0 0 1 1 39709810 39709830 mRNA hsa-miR-590-3p TOP1 miRanda miRanda
14034 chrX 73041814 73041814 1 - C T STAD 73041830 - 73041810 73041850 41 TAAATAGATCTCTTTCAGAAACAATCCTCAGATAACGCATA TAAATAGATCTCTTTCAGAAACAATCCTCAGATAACACATA < 41bp 1 0.369146188046691 1 0.0274412631988525 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 37 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041830 chrX:73041814 . . 0 hm6A_associated_SNPs_67404 0 0 1 1 73041798 73041821 lncRNA hsa-miR-136-5p XIST miRanda starBase2
14034 chr9 108536166 108536166 1 + G T STAD 108536167 + 108536147 108536187 41 TAACCATGATGACTACACAGACTTCTACTATGACATTTGCT TAACCATGATGACTACACATACTTCTACTATGACATTTGCT Direct Loss 1 0.446204618950572 1 0.868311643600464 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108536167 chr9:108536166 nonsynonymous SNV 0.289 0 hm6A_associated_SNPs_67405 0 0 1 1 108536156 108536176 mRNA hsa-miR-411 TMEM38B miRanda miRanda
14034 chr5 72798357 72798357 1 + A G STAD 72798349 + 72798329 72798369 41 AGAAGAAGGTGGTTCATAGAACAGCCACAGCAGATGACAAA AGAAGAAGGTGGTTCATAGAACAGCCACGGCAGATGACAAA < 41bp 1 0.562464530324421 1 0.589291036128998 experiment 0.875070939351158 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 29 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798349 chr5:72798357 synonymous SNV . 0 hm6A_associated_SNPs_67441 0 0 1 1 72798352 72798372 mRNA hsa-miR-129-5p BTF3 miRanda miRanda
14034 chr5 72798357 72798357 1 + A G STAD 72798372 + 72798352 72798392 41 GCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA GCCACGGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAA < 41bp 1 0.450726094933814 1 0.62809693813324 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 6 BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798372 chr5:72798357 synonymous SNV . 0 hm6A_associated_SNPs_67442 0 0 1 1 72798352 72798372 mRNA hsa-miR-129-5p BTF3 miRanda miRanda
14034 chr13 103524621 103524621 1 + T A STAD 103524601 + 103524581 103524621 41 GATAAGACCTAATCCTCATGACACCAAAGTGAAAAAAAAAT GATAAGACCTAATCCTCATGACACCAAAGTGAAAAAAAAAA < 41bp 1 0.67979386769836 1 0.460567355155945 experiment 0.640412264603279 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 41 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103524601 chr13:103524621 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_67443 0 0 1 1 103524616 103524638 mRNA hsa-miR-130a ERCC5 miRanda miRanda
14034 chr1 92846313 92846313 1 + C A STAD 92846308 + 92846288 92846328 41 CCAATTCTTGGCATTCAGAAACATTCTCAGGAAGGTATGGT CCAATTCTTGGCATTCAGAAACATTATCAGGAAGGTATGGT < 41bp 1 0.634418311208352 1 0.416660845279694 experiment 0.731163377583296 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92846308 chr1:92846313 nonsynonymous SNV 0.972 1 hm6A_associated_SNPs_67460 0 0 1 4 92846313 92846335 mRNA hsa-miR-30c RPAP2 miRanda miRanda
14034 chr1 92846313 92846313 1 + C A STAD 92846308 + 92846288 92846328 41 CCAATTCTTGGCATTCAGAAACATTCTCAGGAAGGTATGGT CCAATTCTTGGCATTCAGAAACATTATCAGGAAGGTATGGT < 41bp 1 0.634418311208352 1 0.416660845279694 experiment 0.731163377583296 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92846308 chr1:92846313 nonsynonymous SNV 0.972 1 hm6A_associated_SNPs_67460 0 0 1 4 92846312 92846335 mRNA hsa-miR-30d RPAP2 miRanda miRanda
14034 chr1 92846313 92846313 1 + C A STAD 92846308 + 92846288 92846328 41 CCAATTCTTGGCATTCAGAAACATTCTCAGGAAGGTATGGT CCAATTCTTGGCATTCAGAAACATTATCAGGAAGGTATGGT < 41bp 1 0.634418311208352 1 0.416660845279694 experiment 0.731163377583296 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92846308 chr1:92846313 nonsynonymous SNV 0.972 1 hm6A_associated_SNPs_67460 0 0 1 4 92846295 92846317 mRNA hsa-miR-203 RPAP2 miRanda miRanda
14034 chr1 92846313 92846313 1 + C A STAD 92846308 + 92846288 92846328 41 CCAATTCTTGGCATTCAGAAACATTCTCAGGAAGGTATGGT CCAATTCTTGGCATTCAGAAACATTATCAGGAAGGTATGGT < 41bp 1 0.634418311208352 1 0.416660845279694 experiment 0.731163377583296 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92846308 chr1:92846313 nonsynonymous SNV 0.972 1 hm6A_associated_SNPs_67460 0 0 1 4 92846303 92846321 mRNA hsa-miR-384 RPAP2 miRanda miRanda
14034 chr9 125758389 125758389 1 + C A STAD 125758402 + 125758382 125758422 41 TTGTCATCTATGTGCAGCAAACAACTAATAAAGAACTTGCC TTGTCATATATGTGCAGCAAACAACTAATAAAGAACTTGCC < 41bp 1 0.585673709733197 1 0.52932071685791 experiment 0.828652580533607 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125758402 chr9:125758389 synonymous SNV . 0 hm6A_associated_SNPs_67488 0 0 1 1 125758375 125758395 mRNA hsa-miR-376c RABGAP1 miRanda miRanda
14034 chr16 75611253 75611253 1 + A C STAD 75611251 + 75611231 75611271 41 TGTGGCCTACAGCGGAGAGAACACTTTTGGCTTCTGAGGGC TGTGGCCTACAGCGGAGAGAACCCTTTTGGCTTCTGAGGGC < 41bp 1 0.449700478337381 1 0.844618558883667 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 GABARAPL2 ENSG00000034713 CDS Human protein_coding chr16:75611251 chr16:75611253 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_67489 0 0 1 1 75611253 75611274 mRNA hsa-miR-328 GABARAPL2 miRanda miRanda
14034 chr13 103508441 103508441 1 + G A STAD 103508450 + 103508430 103508470 41 CAAGAAAGAATGAATCAAAAACAAGCATTACAGGTATTTAG CAAGAAAGAATAAATCAAAAACAAGCATTACAGGTATTTAG < 41bp 1 0.677049952261118 1 0.796553015708923 experiment 0.645900095477764 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103508450 chr13:103508441 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_67526 0 0 1 1 103508437 103508460 mRNA hsa-miR-155 ERCC5 miRanda miRanda
14034 chrX 24228401 24228401 1 + G A STAD 24228412 + 24228392 24228432 41 TTTGAAAAGGCACATGAAAAACCATCCCGAACACCTTGCCA TTTGAAAAGACACATGAAAAACCATCCCGAACACCTTGCCA < 41bp 1 0.654368184357494 1 0.987362504005432 experiment 0.691263631285012 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 10 ZFX ENSG00000005889 CDS Human protein_coding chrX:24228412 chrX:24228401 synonymous SNV . 0 hm6A_associated_SNPs_67575 0 0 1 1 24228386 24228407 mRNA hsa-miR-455-5p ZFX miRanda miRanda
14034 chr11 65270134 65270134 1 + T A STAD 65270139 + 65270119 65270159 41 ATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGG ATAACATCTTCTGAGACATAACCAGCCTGGCAGTATGATGG < 41bp 1 0.156861090110225 1 0.825942873954773 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270139 chr11:65270134 . 1.000 0 hm6A_associated_SNPs_67579 0 0 1 1 65270134 65270158 lncRNA hsa-miR-154-3p MALAT1 miRanda starBase2
14034 chr20 36488350 36488350 1 + T A STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGAGGAGTACTACC < 41bp 1 0.662616275552953 1 0.92033463716507 experiment 0.674767448894095 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488350 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_67604 0 0 1 6 36488337 36488358 mRNA hsa-let-7a CTNNBL1 miRanda miRanda
14034 chr20 36488350 36488350 1 + T A STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGAGGAGTACTACC < 41bp 1 0.662616275552953 1 0.92033463716507 experiment 0.674767448894095 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488350 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_67604 0 0 1 6 36488337 36488358 mRNA hsa-let-7b CTNNBL1 miRanda miRanda
14034 chr20 36488350 36488350 1 + T A STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGAGGAGTACTACC < 41bp 1 0.662616275552953 1 0.92033463716507 experiment 0.674767448894095 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488350 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_67604 0 0 1 6 36488337 36488358 mRNA hsa-let-7c CTNNBL1 miRanda miRanda
14034 chr20 36488350 36488350 1 + T A STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGAGGAGTACTACC < 41bp 1 0.662616275552953 1 0.92033463716507 experiment 0.674767448894095 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488350 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_67604 0 0 1 6 36488337 36488358 mRNA hsa-let-7d CTNNBL1 miRanda miRanda
14034 chr20 36488350 36488350 1 + T A STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGAGGAGTACTACC < 41bp 1 0.662616275552953 1 0.92033463716507 experiment 0.674767448894095 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488350 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_67604 0 0 1 6 36488337 36488358 mRNA hsa-let-7e CTNNBL1 miRanda miRanda
14034 chr20 36488350 36488350 1 + T A STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACCGAGGAGGAGTACTACC < 41bp 1 0.662616275552953 1 0.92033463716507 experiment 0.674767448894095 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488350 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_67604 0 0 1 6 36488337 36488358 mRNA hsa-let-7f CTNNBL1 miRanda miRanda
14034 chr10 97920304 97920304 1 + C T STAD 97920303 + 97920283 97920323 41 ATTTTTCCAAGAGGCACAAAACATTTAAACCTGTTAGTTCT ATTTTTCCAAGAGGCACAAAATATTTAAACCTGTTAGTTCT Direct Loss 1 0.634380895167537 1 0.964850664138794 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920303 chr10:97920304 . 0.985 0 hm6A_associated_SNPs_67663 0 0 1 3 97920304 97920325 mRNA hsa-miR-146a ZNF518A miRanda miRanda
14034 chr10 97920304 97920304 1 + C T STAD 97920303 + 97920283 97920323 41 ATTTTTCCAAGAGGCACAAAACATTTAAACCTGTTAGTTCT ATTTTTCCAAGAGGCACAAAATATTTAAACCTGTTAGTTCT Direct Loss 1 0.634380895167537 1 0.964850664138794 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920303 chr10:97920304 . 0.985 0 hm6A_associated_SNPs_67663 0 0 1 3 97920300 97920320 mRNA hsa-miR-194 ZNF518A miRanda miRanda
14034 chr10 97920304 97920304 1 + C T STAD 97920303 + 97920283 97920323 41 ATTTTTCCAAGAGGCACAAAACATTTAAACCTGTTAGTTCT ATTTTTCCAAGAGGCACAAAATATTTAAACCTGTTAGTTCT Direct Loss 1 0.634380895167537 1 0.964850664138794 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920303 chr10:97920304 . 0.985 0 hm6A_associated_SNPs_67663 0 0 1 3 97920304 97920325 mRNA hsa-miR-146b-5p ZNF518A miRanda miRanda
14034 chr21 46596496 46596496 1 + G A STAD 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGACCGCCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.709675372721102 1 0.97965943813324 experiment 0.580649254557795 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596496 nonsynonymous SNV 0.593 1 hm6A_associated_SNPs_67692 0 0 1 2 46596494 46596518 mRNA hsa-miR-301a ADARB1 miRanda miRanda
14034 chr21 46596496 46596496 1 + G A STAD 46596509 + 46596489 46596529 41 TGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGC TGCCCTGACCGCCATTTTTAACTTGCACTTGGATCAGACGC < 41bp 1 0.709675372721102 1 0.97965943813324 experiment 0.580649254557795 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596509 chr21:46596496 nonsynonymous SNV 0.593 1 hm6A_associated_SNPs_67692 0 0 1 2 46596494 46596518 mRNA hsa-miR-301b ADARB1 miRanda miRanda
14034 chr17 59469373 59469373 1 + A G STAD 59469374 + 59469354 59469394 41 AAGCATCGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCG AAGCATCGAGACTCTGAGTGACAGCTCAGGCTCCACCAGCG < 41bp 1 0.789505664397512 1 0.98785388469696 experiment 0.420988671204975 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 20 BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59469374 chr17:59469373 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_67729 0 0 0 1 59469352 59469374 mRNA hsa-miR-361-5p BCAS3 miRanda miRanda
14034 chr2 210884513 210884513 1 + T C STAD 210884517 + 210884497 210884537 41 ACGTTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGTTC ACGTTCTCTTGATCGGCGAAACCATAAGGAGCCCAGTGTTC < 41bp 1 0.314316457893557 1 0.851058661937714 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 RPE ENSG00000197713 CDS Human protein_coding chr2:210884517 chr2:210884513 stoploss 1.000 0 hm6A_associated_SNPs_67739 0 0 1 1 210884508 210884533 mRNA hsa-miR-149 RPE miRanda miRanda
14034 chr5 37697794 37697794 1 + C T STAD 37697803 + 37697783 37697823 41 GGCTCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTT GGCTCATGACTTGGGCACAGACACTTCTTGCGTGACTTTTT < 41bp 1 0.623016017455039 1 0.131307423114777 experiment 0.753967965089922 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697803 chr5:37697794 nonsynonymous SNV 0.990 0 hm6A_associated_SNPs_67771 0 0 0 2 37697782 37697809 mRNA hsa-miR-372 WDR70 miRanda miRanda
14034 chr5 37697794 37697794 1 + C T STAD 37697803 + 37697783 37697823 41 GGCTCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTT GGCTCATGACTTGGGCACAGACACTTCTTGCGTGACTTTTT < 41bp 1 0.623016017455039 1 0.131307423114777 experiment 0.753967965089922 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697803 chr5:37697794 nonsynonymous SNV 0.990 0 hm6A_associated_SNPs_67771 0 0 0 2 37697785 37697805 mRNA hsa-miR-431 WDR70 miRanda miRanda
14034 chr2 217526674 217526674 1 + C A STAD 217526693 + 217526673 217526713 41 CCTGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC CATGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC < 41bp 1 0.713133330493733 1 0.335253655910492 experiment 0.573733339012534 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 2 IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217526693 chr2:217526674 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_67801 0 0 1 2 217526673 217526694 mRNA hsa-miR-27a IGFBP2 miRanda miRanda
14034 chr2 217526674 217526674 1 + C A STAD 217526693 + 217526673 217526713 41 CCTGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC CATGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC < 41bp 1 0.713133330493733 1 0.335253655910492 experiment 0.573733339012534 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 2 IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217526693 chr2:217526674 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_67801 0 0 1 2 217526673 217526694 mRNA hsa-miR-27b IGFBP2 miRanda miRanda
14034 chr2 149227817 149227817 1 + G A STAD 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CGTGCACTGCCACAATGCAAACACTAACTTTATTCACAGTA < 41bp 1 0.669333820797175 1 0.877823114395142 experiment 0.66133235840565 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227817 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_67805 0 0 0 2 149227816 149227836 mRNA hsa-miR-378 MBD5 miRanda miRanda
14034 chr2 149227817 149227817 1 + G A STAD 149227806 + 149227786 149227826 41 CGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTA CGTGCACTGCCACAATGCAAACACTAACTTTATTCACAGTA < 41bp 1 0.669333820797175 1 0.877823114395142 experiment 0.66133235840565 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227806 chr2:149227817 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_67805 0 0 0 2 149227813 149227836 mRNA hsa-miR-422a MBD5 miRanda miRanda
14034 chr12 53346603 53346603 1 + G T STAD 53346604 + 53346584 53346624 41 AGTGGTGTCTGAGACCAATGACACCAAAGTTCTGAGGCATT AGTGGTGTCTGAGACCAATTACACCAAAGTTCTGAGGCATT Direct Loss 1 0.614676207020714 1 0.557799279689789 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 KRT18 ENSG00000111057 CDS Human protein_coding chr12:53346604 chr12:53346603 nonsynonymous SNV 0.983 3 hm6A_associated_SNPs_67836 0 0 1 2 53346591 53346613 mRNA hsa-miR-9 KRT18 miRanda miRanda
14034 chr12 53346603 53346603 1 + G T STAD 53346604 + 53346584 53346624 41 AGTGGTGTCTGAGACCAATGACACCAAAGTTCTGAGGCATT AGTGGTGTCTGAGACCAATTACACCAAAGTTCTGAGGCATT Direct Loss 1 0.614676207020714 1 0.557799279689789 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 20 KRT18 ENSG00000111057 CDS Human protein_coding chr12:53346604 chr12:53346603 nonsynonymous SNV 0.983 3 hm6A_associated_SNPs_67836 0 0 1 2 53346600 53346620 mRNA hsa-miR-371-5p KRT18 miRanda miRanda
14034 chr10 106059034 106059034 1 + C T STAD 106059026 + 106059006 106059046 41 GAACAACCCTAATGCCTTTGACTTTGGGCTGTGCTGAGTCT GAACAACCCTAATGCCTTTGACTTTGGGTTGTGCTGAGTCT < 41bp 1 0.681234728886231 1 0.0377843081951141 experiment 0.637530542227537 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 29 GSTO2 ENSG00000065621 CDS Human protein_coding chr10:106059026 chr10:106059034 synonymous SNV . 0 hm6A_associated_SNPs_67959 0 0 1 1 106059028 106059051 mRNA hsa-miR-411 GSTO2 miRanda miRanda
14034 chr16 30094833 30094833 1 + G A STAD 30094823 + 30094803 30094843 41 TGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACT TGCGCAAGTACGGCTCGGTGACTGTGTGGCACTACTGCACT < 41bp 1 0.444664145919469 1 0.753738105297089 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 31 PPP4C ENSG00000149923 CDS Human protein_coding chr16:30094823 chr16:30094833 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_67968 0 0 1 3 30094824 30094845 mRNA hsa-miR-148a PPP4C miRanda miRanda
14034 chr16 30094833 30094833 1 + G A STAD 30094823 + 30094803 30094843 41 TGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACT TGCGCAAGTACGGCTCGGTGACTGTGTGGCACTACTGCACT < 41bp 1 0.444664145919469 1 0.753738105297089 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 31 PPP4C ENSG00000149923 CDS Human protein_coding chr16:30094823 chr16:30094833 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_67968 0 0 1 3 30094825 30094845 mRNA hsa-miR-152 PPP4C miRanda miRanda
14034 chr16 30094833 30094833 1 + G A STAD 30094823 + 30094803 30094843 41 TGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACT TGCGCAAGTACGGCTCGGTGACTGTGTGGCACTACTGCACT < 41bp 1 0.444664145919469 1 0.753738105297089 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 31 PPP4C ENSG00000149923 CDS Human protein_coding chr16:30094823 chr16:30094833 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_67968 0 0 1 3 30094824 30094845 mRNA hsa-miR-148b PPP4C miRanda miRanda
14034 chr1 82456550 82456550 1 + C T STAD 82456555 + 82456535 82456575 41 CCTACAGTCCCCCAACAGAGACTCTCTTTATACAAGCATGC CCTACAGTCCCCCAATAGAGACTCTCTTTATACAAGCATGC < 41bp 1 0.64315909669952 1 0.999679088592529 experiment 0.71368180660096 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 16 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456555 chr1:82456550 synonymous SNV . 0 hm6A_associated_SNPs_67977 0 0 1 1 82456549 82456567 mRNA hsa-miR-340 LPHN2 miRanda miRanda
14034 chr20 36488339 36488339 1 + C T STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACTGAGGAGGAGTTCTACC < 41bp 1 0.709950701838828 1 0.902806758880615 experiment 0.580098596322345 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488339 synonymous SNV . 0 hm6A_associated_SNPs_67982 0 0 1 6 36488337 36488358 mRNA hsa-let-7a CTNNBL1 miRanda miRanda
14034 chr20 36488339 36488339 1 + C T STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACTGAGGAGGAGTTCTACC < 41bp 1 0.709950701838828 1 0.902806758880615 experiment 0.580098596322345 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488339 synonymous SNV . 0 hm6A_associated_SNPs_67982 0 0 1 6 36488337 36488358 mRNA hsa-let-7b CTNNBL1 miRanda miRanda
14034 chr20 36488339 36488339 1 + C T STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACTGAGGAGGAGTTCTACC < 41bp 1 0.709950701838828 1 0.902806758880615 experiment 0.580098596322345 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488339 synonymous SNV . 0 hm6A_associated_SNPs_67982 0 0 1 6 36488337 36488358 mRNA hsa-let-7c CTNNBL1 miRanda miRanda
14034 chr20 36488339 36488339 1 + C T STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACTGAGGAGGAGTTCTACC < 41bp 1 0.709950701838828 1 0.902806758880615 experiment 0.580098596322345 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488339 synonymous SNV . 0 hm6A_associated_SNPs_67982 0 0 1 6 36488337 36488358 mRNA hsa-let-7d CTNNBL1 miRanda miRanda
14034 chr20 36488339 36488339 1 + C T STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACTGAGGAGGAGTTCTACC < 41bp 1 0.709950701838828 1 0.902806758880615 experiment 0.580098596322345 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488339 synonymous SNV . 0 hm6A_associated_SNPs_67982 0 0 1 6 36488337 36488358 mRNA hsa-let-7e CTNNBL1 miRanda miRanda
14034 chr20 36488339 36488339 1 + C T STAD 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCGACAATGACACTGAGGAGGAGTTCTACC < 41bp 1 0.709950701838828 1 0.902806758880615 experiment 0.580098596322345 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488339 synonymous SNV . 0 hm6A_associated_SNPs_67982 0 0 1 6 36488337 36488358 mRNA hsa-let-7f CTNNBL1 miRanda miRanda
14034 chr20 57466874 57466874 1 + G A STAD 57466879 + 57466859 57466899 41 CGAGAAGCAGCTGCAGAAGGACAAGCAGGTCTACCGGGCCA CGAGAAGCAGCTGCAAAAGGACAAGCAGGTCTACCGGGCCA < 41bp 1 0.762157453145864 1 0.997670769691467 experiment 0.475685093708272 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 16 GNAS ENSG00000087460 CDS Human protein_coding chr20:57466879 chr20:57466874 synonymous SNV . 0 hm6A_associated_SNPs_68063 0 0 1 1 57466856 57466877 mRNA hsa-miR-544 GNAS miRanda miRanda
14034 chr1 24975417 24975417 1 + T G STAD 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATGTATGGGAGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.590352477657635 1 0.802714467048645 experiment 0.81929504468473 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975417 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_68100 0 0 1 1 24975405 24975426 mRNA hsa-miR-150 SRRM1 miRanda miRanda
14034 chr2 71189997 71189997 1 + G A STAD 71189999 + 71189979 71190019 41 TGTGCTGGTCATACTGACGGACATGAGTTCCTATGCAGAGG TGTGCTGGTCATACTGACAGACATGAGTTCCTATGCAGAGG < 41bp 1 0.410407622397369 1 0.373061895370483 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 19 ATP6V1B1 ENSG00000116039 CDS Human protein_coding chr2:71189999 chr2:71189997 synonymous SNV . 0 hm6A_associated_SNPs_68123 0 0 0 1 71189995 71190016 mRNA hsa-miR-153 ATP6V1B1 miRanda miRanda
14034 chr1 231488454 231488454 1 + A T STAD 231488450 + 231488430 231488470 41 AATTTACCTTCACCTGGGAAACTGATCACTTCACATGCCAT AATTTACCTTCACCTGGGAAACTGTTCACTTCACATGCCAT < 41bp 1 0.790784554538073 1 0.630941212177277 experiment 0.418430890923855 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488450 chr1:231488454 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_68139 0 0 1 4 231488446 231488469 mRNA hsa-miR-34c-5p C1orf124 miRanda miRanda
14034 chr1 231488454 231488454 1 + A T STAD 231488450 + 231488430 231488470 41 AATTTACCTTCACCTGGGAAACTGATCACTTCACATGCCAT AATTTACCTTCACCTGGGAAACTGTTCACTTCACATGCCAT < 41bp 1 0.790784554538073 1 0.630941212177277 experiment 0.418430890923855 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488450 chr1:231488454 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_68139 0 0 1 4 231488446 231488469 mRNA hsa-miR-449a C1orf124 miRanda miRanda
14034 chr1 231488454 231488454 1 + A T STAD 231488450 + 231488430 231488470 41 AATTTACCTTCACCTGGGAAACTGATCACTTCACATGCCAT AATTTACCTTCACCTGGGAAACTGTTCACTTCACATGCCAT < 41bp 1 0.790784554538073 1 0.630941212177277 experiment 0.418430890923855 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488450 chr1:231488454 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_68139 0 0 1 4 231488446 231488469 mRNA hsa-miR-449b C1orf124 miRanda miRanda
14034 chr1 231488454 231488454 1 + A T STAD 231488450 + 231488430 231488470 41 AATTTACCTTCACCTGGGAAACTGATCACTTCACATGCCAT AATTTACCTTCACCTGGGAAACTGTTCACTTCACATGCCAT < 41bp 1 0.790784554538073 1 0.630941212177277 experiment 0.418430890923855 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488450 chr1:231488454 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_68139 0 0 1 4 231488437 231488459 mRNA hsa-miR-542-3p C1orf124 miRanda miRanda
14034 chr19 9452409 9452409 1 + C G STAD 9452408 + 9452388 9452428 41 AGAGGAACTGTTTGACTTTAACCAATGTGAAAAAGCCTTGA AGAGGAACTGTTTGACTTTAAGCAATGTGAAAAAGCCTTGA Direct Loss 1 0.545548980649556 1 0.962341904640198 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452408 chr19:9452409 nonsynonymous SNV 0.964 0 hm6A_associated_SNPs_68151 0 0 1 2 9452398 9452418 mRNA hsa-miR-23a ZNF559 miRanda miRanda
14034 chr19 9452409 9452409 1 + C G STAD 9452408 + 9452388 9452428 41 AGAGGAACTGTTTGACTTTAACCAATGTGAAAAAGCCTTGA AGAGGAACTGTTTGACTTTAAGCAATGTGAAAAAGCCTTGA Direct Loss 1 0.545548980649556 1 0.962341904640198 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452408 chr19:9452409 nonsynonymous SNV 0.964 0 hm6A_associated_SNPs_68151 0 0 1 2 9452398 9452418 mRNA hsa-miR-23b ZNF559 miRanda miRanda
14034 chr9 32436322 32436322 1 + C T STAD 32436315 + 32436295 32436335 41 ACGCCGTCATGGCACGGGGAACATTTGCCAACATTCGCTTG ACGCCGTCATGGCACGGGGAACATTTGTCAACATTCGCTTG < 41bp 1 0.695919873197535 1 0.348461329936981 experiment 0.60816025360493 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436315 chr9:32436322 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_68204 0 0 0 3 32436304 32436326 mRNA hsa-miR-96 ACO1 miRanda miRanda
14034 chr9 32436322 32436322 1 + C T STAD 32436315 + 32436295 32436335 41 ACGCCGTCATGGCACGGGGAACATTTGCCAACATTCGCTTG ACGCCGTCATGGCACGGGGAACATTTGTCAACATTCGCTTG < 41bp 1 0.695919873197535 1 0.348461329936981 experiment 0.60816025360493 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436315 chr9:32436322 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_68204 0 0 0 3 32436303 32436326 mRNA hsa-miR-182 ACO1 miRanda miRanda
14034 chr9 32436322 32436322 1 + C T STAD 32436315 + 32436295 32436335 41 ACGCCGTCATGGCACGGGGAACATTTGCCAACATTCGCTTG ACGCCGTCATGGCACGGGGAACATTTGTCAACATTCGCTTG < 41bp 1 0.695919873197535 1 0.348461329936981 experiment 0.60816025360493 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436315 chr9:32436322 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_68204 0 0 0 3 32436305 32436326 mRNA hsa-miR-1271 ACO1 miRanda miRanda
14034 chr9 32436322 32436322 1 + C T STAD 32436340 + 32436320 32436360 41 TGCCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG TGTCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG < 41bp 1 0.513306556435685 1 0.350374817848206 experiment 0.973386887128629 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 3 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436340 chr9:32436322 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_68205 0 0 0 3 32436304 32436326 mRNA hsa-miR-96 ACO1 miRanda miRanda
14034 chr9 32436322 32436322 1 + C T STAD 32436340 + 32436320 32436360 41 TGCCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG TGTCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG < 41bp 1 0.513306556435685 1 0.350374817848206 experiment 0.973386887128629 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 3 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436340 chr9:32436322 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_68205 0 0 0 3 32436303 32436326 mRNA hsa-miR-182 ACO1 miRanda miRanda
14034 chr9 32436322 32436322 1 + C T STAD 32436340 + 32436320 32436360 41 TGCCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG TGTCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG < 41bp 1 0.513306556435685 1 0.350374817848206 experiment 0.973386887128629 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 3 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436340 chr9:32436322 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_68205 0 0 0 3 32436305 32436326 mRNA hsa-miR-1271 ACO1 miRanda miRanda
14034 chr3 148889990 148889990 1 + G A STAD 148889997 + 148889977 148890017 41 CTCTATTGCAGTCGAAAGAAACCATTGACTTAAAGGTATCA CTCTATTGCAGTCAAAAGAAACCATTGACTTAAAGGTATCA < 41bp 1 0.474545411644085 1 0.551953434944153 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 14 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148889997 chr3:148889990 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_68298 0 0 1 1 148889987 148890008 mRNA hsa-miR-224 HPS3 miRanda miRanda
14034 chr3 148889990 148889990 1 + G A STAD 148890004 + 148889984 148890024 41 GCAGTCGAAAGAAACCATTGACTTAAAGGTATCATTTGAAA GCAGTCAAAAGAAACCATTGACTTAAAGGTATCATTTGAAA < 41bp 1 0.736851064084462 1 0.861292481422424 experiment 0.526297871831076 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148890004 chr3:148889990 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_68299 0 0 1 1 148889987 148890008 mRNA hsa-miR-224 HPS3 miRanda miRanda
14034 chr1 76226868 76226868 1 + G A STAD 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAATTACCA < 41bp 1 0.290208116721092 1 0.231621861457825 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 35 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226868 nonsynonymous SNV 0.981 1 hm6A_associated_SNPs_68313 1 0 1 3 76226857 76226878 mRNA hsa-miR-330-5p ACADM miRanda miRanda
14034 chr1 76226868 76226868 1 + G A STAD 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAATTACCA < 41bp 1 0.290208116721092 1 0.231621861457825 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 35 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226868 nonsynonymous SNV 0.981 1 hm6A_associated_SNPs_68313 1 0 1 3 76226859 76226878 mRNA hsa-miR-326 ACADM miRanda miRanda
14034 chr1 76226868 76226868 1 + G A STAD 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAATTACCA < 41bp 1 0.290208116721092 1 0.231621861457825 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 35 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226868 nonsynonymous SNV 0.981 1 hm6A_associated_SNPs_68313 1 0 1 3 76226867 76226886 mRNA hsa-miR-520d-3p ACADM miRanda miRanda
14034 chr11 67201891 67201891 1 + G A STAD 67201906 + 67201886 67201926 41 CACACGGCAGACGCCGGTGGACAGTCCTGATGACACAGCCC CACACAGCAGACGCCGGTGGACAGTCCTGATGACACAGCCC < 41bp 1 0.605469316260348 1 0.962200164794922 experiment 0.789061367479305 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 6 RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201906 chr11:67201891 nonsynonymous SNV 0.981 0 hm6A_associated_SNPs_68323 0 0 1 1 67201876 67201898 mRNA hsa-miR-346 RPS6KB2 miRanda miRanda
14034 chr12 44782029 44782029 1 + A G STAD 44782043 + 44782023 44782063 41 TAAAACATATGTTGAGGGAGACATGTTCTTACACAGCAGGT TAAAACGTATGTTGAGGGAGACATGTTCTTACACAGCAGGT < 41bp 1 0.56280557066538 1 0.628319084644318 experiment 0.874388858669241 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 TMEM117 ENSG00000139173 CDS Human protein_coding chr12:44782043 chr12:44782029 synonymous SNV . 0 hm6A_associated_SNPs_68355 0 0 1 1 44782029 44782050 mRNA hsa-miR-212 TMEM117 miRanda miRanda
14034 chr11 35211581 35211581 1 + C T STAD 35211568 + 35211548 35211588 41 ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACA ACACCCCATCCCAGACGAAGACAGTCCCTGGATTACCGACA < 41bp 1 0.476029099112591 1 0.979279041290283 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211568 chr11:35211581 synonymous SNV . 0 hm6A_associated_SNPs_68414 0 0 1 2 35211568 35211594 mRNA hsa-miR-210 CD44 miRanda miRanda
14034 chr11 35211581 35211581 1 + C T STAD 35211568 + 35211548 35211588 41 ACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACA ACACCCCATCCCAGACGAAGACAGTCCCTGGATTACCGACA < 41bp 1 0.476029099112591 1 0.979279041290283 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 34 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211568 chr11:35211581 synonymous SNV . 0 hm6A_associated_SNPs_68414 0 0 1 2 35211576 35211597 mRNA hsa-miR-431 CD44 miRanda miRanda
14034 chr11 35211581 35211581 1 + C T STAD 35211595 + 35211575 35211615 41 CTGGATCACCGACAGCACAGACAGAATCCCTGCTACCAGTA CTGGATTACCGACAGCACAGACAGAATCCCTGCTACCAGTA < 41bp 1 0.254046438516974 1 0.994212985038757 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211595 chr11:35211581 synonymous SNV . 0 hm6A_associated_SNPs_68415 0 0 1 2 35211568 35211594 mRNA hsa-miR-210 CD44 miRanda miRanda
14034 chr11 35211581 35211581 1 + C T STAD 35211595 + 35211575 35211615 41 CTGGATCACCGACAGCACAGACAGAATCCCTGCTACCAGTA CTGGATTACCGACAGCACAGACAGAATCCCTGCTACCAGTA < 41bp 1 0.254046438516974 1 0.994212985038757 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 7 CD44 ENSG00000026508 CDS Human protein_coding chr11:35211595 chr11:35211581 synonymous SNV . 0 hm6A_associated_SNPs_68415 0 0 1 2 35211576 35211597 mRNA hsa-miR-431 CD44 miRanda miRanda
14034 chr11 65267838 65267838 1 + T C STAD 65267843 + 65267823 65267863 41 TTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTG TTATTTTTTAAATCCCGAGGACTAGCATTAATTGACAGCTG < 41bp 1 0.159509252135002 1 0.965196490287781 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267843 chr11:65267838 . . 0 hm6A_associated_SNPs_68416 0 0 1 2 65267833 65267853 lncRNA hsa-miR-155-5p MALAT1 miRanda starBase2
14034 chr11 65267838 65267838 1 + T C STAD 65267843 + 65267823 65267863 41 TTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTG TTATTTTTTAAATCCCGAGGACTAGCATTAATTGACAGCTG < 41bp 1 0.159509252135002 1 0.965196490287781 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267843 chr11:65267838 . . 0 hm6A_associated_SNPs_68416 0 0 1 2 65267823 65267851 lncRNA hsa-miR-3146 MALAT1 miRanda starBase2
14034 chr11 65267838 65267838 1 + T C STAD 65267857 + 65267837 65267877 41 CTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA CCGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA < 41bp 1 0.101894264891395 1 0.929985165596008 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267857 chr11:65267838 . . 0 hm6A_associated_SNPs_68417 0 0 1 2 65267833 65267853 lncRNA hsa-miR-155-5p MALAT1 miRanda starBase2
14034 chr11 65267838 65267838 1 + T C STAD 65267857 + 65267837 65267877 41 CTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA CCGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACA < 41bp 1 0.101894264891395 1 0.929985165596008 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267857 chr11:65267838 . . 0 hm6A_associated_SNPs_68417 0 0 1 2 65267823 65267851 lncRNA hsa-miR-3146 MALAT1 miRanda starBase2
14034 chr1 236704976 236704976 1 + C G STAD 236704990 + 236704970 236705010 41 AAGCATCTAGTCTGGAACTGACAGAGATAAGTAGAGAAAAT AAGCATGTAGTCTGGAACTGACAGAGATAAGTAGAGAAAAT < 41bp 1 0.374206010448644 1 0.559440732002258 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236704990 chr1:236704976 nonsynonymous SNV 0.014 2 hm6A_associated_SNPs_68428 0 0 1 1 236704971 236704992 mRNA hsa-miR-223 LGALS8 miRanda miRanda
14034 chr3 152018069 152018069 1 + G A STAD 152018058 + 152018038 152018078 41 GTAGAGAGTTCCAGAGGGGGACTTGCTCACGGCCAGACACG GTAGAGAGTTCCAGAGGGGGACTTGCTCACGACCAGACACG < 41bp 1 0.566115464618421 1 0.916031062602997 experiment 0.867769070763158 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018058 chr3:152018069 synonymous SNV . 0 hm6A_associated_SNPs_68437 0 0 1 1 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr3 152018069 152018069 1 + G A STAD 152018074 + 152018054 152018094 41 GGGGACTTGCTCACGGCCAGACACGGAATGTAAATTTGCAC GGGGACTTGCTCACGACCAGACACGGAATGTAAATTTGCAC < 41bp 1 0.726928098087506 1 0.862805485725403 experiment 0.546143803824988 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 16 MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018074 chr3:152018069 synonymous SNV . 0 hm6A_associated_SNPs_68438 0 0 1 1 152018059 152018079 mRNA hsa-miR-187 MBNL1 miRanda miRanda
14034 chr12 69981979 69981979 1 + C T STAD 69981969 + 69981949 69981989 41 CAAAAAAGATTCATCCACAGACCATCATAGCGGGTTGGAGA CAAAAAAGATTCATCCACAGACCATCATAGTGGGTTGGAGA < 41bp 1 0.329735184389221 1 0.718267858028412 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69981969 chr12:69981979 nonsynonymous SNV 0.978 0 hm6A_associated_SNPs_68477 0 0 1 1 69981968 69981991 mRNA hsa-miR-150 CCT2 miRanda miRanda
14034 chr9 134073173 134073173 1 + C T STAD 134073190 + 134073170 134073210 41 CATCTCTAAGTGCTGGCAAGACTAGTTTTTCATTTGGAAGC CATTTCTAAGTGCTGGCAAGACTAGTTTTTCATTTGGAAGC < 41bp 1 0.779570285743458 1 0.975811123847961 experiment 0.440859428513083 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 NUP214 ENSG00000126883 CDS Human protein_coding chr9:134073190 chr9:134073173 nonsynonymous SNV 0.004 0 hm6A_associated_SNPs_68489 0 0 1 1 134073172 134073192 mRNA hsa-miR-431 NUP214 miRanda miRanda
14034 chrX 135290003 135290003 1 + C A STAD 135289993 + 135289973 135290013 41 GGGGACCGTCTGGCACAAAGACTGCTTCACCTGTAGTAACT GGGGACCGTCTGGCACAAAGACTGCTTCACATGTAGTAACT < 41bp 1 0.250471977313167 1 0.963228940963745 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 FHL1 ENSG00000022267 CDS Human protein_coding chrX:135289993 chrX:135290003 synonymous SNV . 0 hm6A_associated_SNPs_68494 0 0 1 2 135289987 135290009 mRNA hsa-miR-139-5p FHL1 miRanda miRanda
14034 chrX 135290003 135290003 1 + C A STAD 135289993 + 135289973 135290013 41 GGGGACCGTCTGGCACAAAGACTGCTTCACCTGTAGTAACT GGGGACCGTCTGGCACAAAGACTGCTTCACATGTAGTAACT < 41bp 1 0.250471977313167 1 0.963228940963745 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 FHL1 ENSG00000022267 CDS Human protein_coding chrX:135289993 chrX:135290003 synonymous SNV . 0 hm6A_associated_SNPs_68494 0 0 1 2 135289983 135290006 mRNA hsa-miR-125a-3p FHL1 miRanda miRanda
14034 chr1 236703909 236703909 1 + G A STAD 236703925 + 236703905 236703945 41 GATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCA GATCAGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCA < 41bp 1 0.717244416231014 1 0.444420456886292 experiment 0.565511167537972 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 5 LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236703925 chr1:236703909 nonsynonymous SNV 0.091 0 hm6A_associated_SNPs_68512 0 0 1 2 236703898 236703918 mRNA hsa-miR-330-5p LGALS8 miRanda miRanda
14034 chr1 236703909 236703909 1 + G A STAD 236703925 + 236703905 236703945 41 GATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCA GATCAGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCA < 41bp 1 0.717244416231014 1 0.444420456886292 experiment 0.565511167537972 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 5 LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236703925 chr1:236703909 nonsynonymous SNV 0.091 0 hm6A_associated_SNPs_68512 0 0 1 2 236703899 236703918 mRNA hsa-miR-326 LGALS8 miRanda miRanda
14034 chrX 73042782 73042782 1 - A C STAD 73042763 - 73042743 73042783 41 CTTATGGTGGAAACACAGGAACAAATTCTCTAAGAGACTGT CGTATGGTGGAAACACAGGAACAAATTCTCTAAGAGACTGT < 41bp 1 0.479550668423889 1 0.359854996204376 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 2 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042763 chrX:73042782 . . 0 hm6A_associated_SNPs_68515 0 0 1 1 73042781 73042799 lncRNA hsa-miR-577 XIST miRanda starBase2
14034 chr6 43581728 43581728 1 + A G STAD 43581716 + 43581696 43581736 41 AGCCCTCATTACCTTTTCAAACCAGTCAAAGTACAGGAACT AGCCCTCATTACCTTTTCAAACCAGTCAAAGTGCAGGAACT < 41bp 1 0.562312540515269 1 0.975387334823608 experiment 0.875374918969463 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;Control 33 POLH ENSG00000170734 CDS Human protein_coding chr6:43581716 chr6:43581728 nonsynonymous SNV 0.013 0 hm6A_associated_SNPs_68523 0 0 1 2 43581721 43581742 mRNA hsa-miR-24 POLH miRanda miRanda
14034 chr6 43581728 43581728 1 + A G STAD 43581716 + 43581696 43581736 41 AGCCCTCATTACCTTTTCAAACCAGTCAAAGTACAGGAACT AGCCCTCATTACCTTTTCAAACCAGTCAAAGTGCAGGAACT < 41bp 1 0.562312540515269 1 0.975387334823608 experiment 0.875374918969463 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|30867593;GSE121942;miCLIP;HepG2;Control 33 POLH ENSG00000170734 CDS Human protein_coding chr6:43581716 chr6:43581728 nonsynonymous SNV 0.013 0 hm6A_associated_SNPs_68523 0 0 1 2 43581711 43581733 mRNA hsa-miR-486-5p POLH miRanda miRanda
14034 chr14 24113730 24113730 1 + T C STAD 24113735 + 24113715 24113755 41 TGGTTCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTG TGGTTCCAGGAATTACCAAAACTGACTTCAGCAAAGTGGTG < 41bp 1 0.135124243295753 1 0.149067670106888 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 16 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113735 chr14:24113730 nonsynonymous SNV 0.027 3 hm6A_associated_SNPs_68530 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr14 24113730 24113730 1 + T C STAD 24113739 + 24113719 24113759 41 TCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGA TCCAGGAATTACCAAAACTGACTTCAGCAAAGTGGTGAGGA < 41bp 1 0.190888332236777 1 0.105397820472717 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 12 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113739 chr14:24113730 nonsynonymous SNV 0.027 3 hm6A_associated_SNPs_68531 0 0 1 1 24113720 24113741 mRNA hsa-miR-223 DHRS2 miRanda miRanda
14034 chr16 89629420 89629420 1 + C T STAD 89629426 + 89629406 89629446 41 AGAGCCAAGGAAGCCGCAGAACAGGATGTTGAAAAGAAAAA AGAGCCAAGGAAGCTGCAGAACAGGATGTTGAAAAGAAAAA < 41bp 1 0.7204925547137 1 0.980883896350861 experiment 0.559014890572601 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629426 chr16:89629420 synonymous SNV . 0 hm6A_associated_SNPs_68556 0 0 1 2 89629413 89629439 mRNA hsa-miR-505 RPL13 miRanda miRanda
14034 chr16 89629420 89629420 1 + C T STAD 89629426 + 89629406 89629446 41 AGAGCCAAGGAAGCCGCAGAACAGGATGTTGAAAAGAAAAA AGAGCCAAGGAAGCTGCAGAACAGGATGTTGAAAAGAAAAA < 41bp 1 0.7204925547137 1 0.980883896350861 experiment 0.559014890572601 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 15 RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629426 chr16:89629420 synonymous SNV . 0 hm6A_associated_SNPs_68556 0 0 1 2 89629416 89629438 mRNA hsa-miR-421 RPL13 miRanda miRanda
14034 chr1 82456476 82456476 1 + G C STAD 82456491 + 82456471 82456511 41 AGAAAGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAA AGAAACTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAA < 41bp 1 0.565672367415002 1 0.999727368354797 experiment 0.868655265169996 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456491 chr1:82456476 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_68565 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr1 82456476 82456476 1 + G C STAD 82456495 + 82456475 82456515 41 AGTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA ACTGAAGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGA < 41bp 1 0.780194992393349 1 0.999765753746033 experiment 0.439610015213302 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456495 chr1:82456476 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_68566 0 0 1 1 82456476 82456497 mRNA hsa-miR-223 LPHN2 miRanda miRanda
14034 chr6 31541465 31541465 1 + C A STAD 31541472 + 31541452 31541492 41 TGGAGCCTTCGCTCTGTAGAACTTGGAAAAATCCAGAAAGA TGGAGCCTTCGCTATGTAGAACTTGGAAAAATCCAGAAAGA < 41bp 1 0.641151674271031 1 0.813986778259277 experiment 0.717696651457938 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 LTA ENSG00000226979 CDS Human protein_coding chr6:31541472 chr6:31541465 nonsynonymous SNV 0.897 2 hm6A_associated_SNPs_68605 0 0 0 2 31541451 31541471 mRNA hsa-miR-139-5p LTA miRanda miRanda
14034 chr6 31541465 31541465 1 + C A STAD 31541472 + 31541452 31541492 41 TGGAGCCTTCGCTCTGTAGAACTTGGAAAAATCCAGAAAGA TGGAGCCTTCGCTATGTAGAACTTGGAAAAATCCAGAAAGA < 41bp 1 0.641151674271031 1 0.813986778259277 experiment 0.717696651457938 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 14 LTA ENSG00000226979 CDS Human protein_coding chr6:31541472 chr6:31541465 nonsynonymous SNV 0.897 2 hm6A_associated_SNPs_68605 0 0 0 2 31541465 31541486 mRNA hsa-miR-876-5p LTA miRanda miRanda
14034 chr1 225976948 225976948 1 + G T TGCT 225976957 + 225976937 225976977 41 GACAGTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTA GACAGTGTTTGTTGTATAAAACAGACCAAGCTCAAGATGTA < 41bp 1 0.779431235977612 1 0.700017273426056 experiment 0.441137528044775 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 12 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976957 chr1:225976948 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_68613 0 0 1 2 225976945 225976966 mRNA hsa-miR-133a SRP9 miRanda miRanda
14034 chr1 225976948 225976948 1 + G T TGCT 225976957 + 225976937 225976977 41 GACAGTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTA GACAGTGTTTGTTGTATAAAACAGACCAAGCTCAAGATGTA < 41bp 1 0.779431235977612 1 0.700017273426056 experiment 0.441137528044775 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 12 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976957 chr1:225976948 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_68613 0 0 1 2 225976945 225976966 mRNA hsa-miR-133b SRP9 miRanda miRanda
14034 chr9 127996190 127996190 1 + T C TGCT 127996173 + 127996153 127996193 41 ACTCACATGAGGAAAGCCAGACTGCTACACTGCTCTGTTTG ACTCACATGAGGAAAGCCAGACTGCTACACTGCTCTGCTTG < 41bp 1 0.665306683516695 1 0.968569040298462 experiment 0.669386632966611 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996173 chr9:127996190 synonymous SNV . 0 hm6A_associated_SNPs_68654 0 0 1 1 127996188 127996210 mRNA hsa-miR-324-5p RABEPK miRanda miRanda
14034 chr8 42940420 42940420 1 + C T TGCT 42940425 + 42940405 42940445 41 CCAACAAATGTACAGCAATAACACCATCCAGAAGAACTTGA CCAACAAATGTACAGTAATAACACCATCCAGAAGAACTTGA < 41bp 1 0.748432104469174 1 0.901462733745575 experiment 0.503135791061652 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 16 FNTA ENSG00000168522 CDS Human protein_coding chr8:42940425 chr8:42940420 stopgain 0.590 0 hm6A_associated_SNPs_68673 0 0 0 1 42940403 42940425 mRNA hsa-miR-137 FNTA miRanda miRanda
14034 chrX 74519638 74519638 1 + A G TGCT 74519650 + 74519630 74519670 41 TGATTCAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT TGATTCAGGGTGATGAGGAGACACAAAGAGCCAAAGTATAT < 41bp 1 0.548361216388064 1 0.659539103507996 experiment 0.903277567223871 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 UPRT ENSG00000094841 CDS Human protein_coding chrX:74519650 chrX:74519638 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_68677 0 0 1 1 74519637 74519656 mRNA hsa-miR-599 UPRT miRanda miRanda
14034 chr4 129131032 129131032 1 + G T TGCT 129131043 + 129131023 129131063 41 GATGAATTTGGAAGAAAAAGACATTCCTCTACTTCTGGTGA GATGAATTTTGAAGAAAAAGACATTCCTCTACTTCTGGTGA < 41bp 1 0.702237490291755 1 0.866550505161285 experiment 0.59552501941649 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 LARP1B ENSG00000138709 CDS Human protein_coding chr4:129131043 chr4:129131032 stopgain 0.999 1 hm6A_associated_SNPs_68689 0 0 1 3 129131029 129131050 mRNA hsa-miR-1 LARP1B miRanda miRanda
14034 chr4 129131032 129131032 1 + G T TGCT 129131043 + 129131023 129131063 41 GATGAATTTGGAAGAAAAAGACATTCCTCTACTTCTGGTGA GATGAATTTTGAAGAAAAAGACATTCCTCTACTTCTGGTGA < 41bp 1 0.702237490291755 1 0.866550505161285 experiment 0.59552501941649 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 LARP1B ENSG00000138709 CDS Human protein_coding chr4:129131043 chr4:129131032 stopgain 0.999 1 hm6A_associated_SNPs_68689 0 0 1 3 129131029 129131050 mRNA hsa-miR-206 LARP1B miRanda miRanda
14034 chr4 129131032 129131032 1 + G T TGCT 129131043 + 129131023 129131063 41 GATGAATTTGGAAGAAAAAGACATTCCTCTACTTCTGGTGA GATGAATTTTGAAGAAAAAGACATTCCTCTACTTCTGGTGA < 41bp 1 0.702237490291755 1 0.866550505161285 experiment 0.59552501941649 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 LARP1B ENSG00000138709 CDS Human protein_coding chr4:129131043 chr4:129131032 stopgain 0.999 1 hm6A_associated_SNPs_68689 0 0 1 3 129131030 129131050 mRNA hsa-miR-613 LARP1B miRanda miRanda
14034 chr12 104709560 104709560 1 + G A TGCT 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCAGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.654563100348562 1 0.832388639450073 experiment 0.690873799302877 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709560 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_68712 0 0 1 5 104709558 104709580 mRNA hsa-miR-181a TXNRD1 miRanda miRanda
14034 chr12 104709560 104709560 1 + G A TGCT 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCAGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.654563100348562 1 0.832388639450073 experiment 0.690873799302877 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709560 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_68712 0 0 1 5 104709558 104709580 mRNA hsa-miR-181b TXNRD1 miRanda miRanda
14034 chr12 104709560 104709560 1 + G A TGCT 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCAGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.654563100348562 1 0.832388639450073 experiment 0.690873799302877 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709560 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_68712 0 0 1 5 104709558 104709580 mRNA hsa-miR-181c TXNRD1 miRanda miRanda
14034 chr12 104709560 104709560 1 + G A TGCT 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCAGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.654563100348562 1 0.832388639450073 experiment 0.690873799302877 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709560 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_68712 0 0 1 5 104709555 104709576 mRNA hsa-miR-377 TXNRD1 miRanda miRanda
14034 chr12 104709560 104709560 1 + G A TGCT 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCAGAGGAACATGTGTGAATGTGGGTTGC < 41bp 1 0.654563100348562 1 0.832388639450073 experiment 0.690873799302877 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709560 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_68712 0 0 1 5 104709558 104709580 mRNA hsa-miR-181d TXNRD1 miRanda miRanda
14034 chr15 92671632 92671632 1 + T C TGCT 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATAACTGCGAATGCCAAACCGATT < 41bp 1 0.281786587466285 1 0.937007665634155 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671632 nonsynonymous SNV . 0 hm6A_associated_SNPs_68722 0 0 1 3 92671615 92671635 mRNA hsa-miR-27a SLCO3A1 miRanda miRanda
14034 chr15 92671632 92671632 1 + T C TGCT 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATAACTGCGAATGCCAAACCGATT < 41bp 1 0.281786587466285 1 0.937007665634155 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671632 nonsynonymous SNV . 0 hm6A_associated_SNPs_68722 0 0 1 3 92671615 92671635 mRNA hsa-miR-27b SLCO3A1 miRanda miRanda
14034 chr15 92671632 92671632 1 + T C TGCT 92671628 + 92671608 92671648 41 CTACTCGCCCTGCAATAATAACTGTGAATGCCAAACCGATT CTACTCGCCCTGCAATAATAACTGCGAATGCCAAACCGATT < 41bp 1 0.281786587466285 1 0.937007665634155 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92671628 chr15:92671632 nonsynonymous SNV . 0 hm6A_associated_SNPs_68722 0 0 1 3 92671614 92671634 mRNA hsa-miR-128 SLCO3A1 miRanda miRanda
14034 chr14 105175694 105175694 1 + C A THCA 105175687 + 105175667 105175707 41 TTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTCCTTCC TTTGATGTGGAGGTTCTCAAACAACTCATTAAGCTCCTTCC < 41bp 1 0.611616726931239 1 0.782714486122131 experiment 0.776766546137522 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 28 INF2 ENSG00000203485 CDS Human protein_coding chr14:105175687 chr14:105175694 nonsynonymous SNV 0.961 0 hm6A_associated_SNPs_68735 0 0 1 2 105175682 105175705 mRNA hsa-miR-28-5p INF2 miRanda miRanda
14034 chr14 105175694 105175694 1 + C A THCA 105175687 + 105175667 105175707 41 TTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTCCTTCC TTTGATGTGGAGGTTCTCAAACAACTCATTAAGCTCCTTCC < 41bp 1 0.611616726931239 1 0.782714486122131 experiment 0.776766546137522 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 28 INF2 ENSG00000203485 CDS Human protein_coding chr14:105175687 chr14:105175694 nonsynonymous SNV 0.961 0 hm6A_associated_SNPs_68735 0 0 1 2 105175683 105175705 mRNA hsa-miR-708 INF2 miRanda miRanda
14034 chr16 68331209 68331209 1 + A G THCA 68331227 + 68331207 68331247 41 AAAGGATGAGAGGAAAACTGACTAGAGGTCAGAGGTGGCTT AAGGGATGAGAGGAAAACTGACTAGAGGTCAGAGGTGGCTT < 41bp 1 0.641467172357858 1 0.300145030021667 experiment 0.717065655284283 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68331227 chr16:68331209 nonsynonymous SNV 0.842 1 hm6A_associated_SNPs_68758 0 0 1 1 68331208 68331229 mRNA hsa-miR-223 SLC7A6 miRanda miRanda
14034 chr11 65273305 65273305 1 + C G THCA 65273298 + 65273278 65273318 41 AACCAGTAAGTGGAGAAATAACATGTTCAAGAACTGTAATG AACCAGTAAGTGGAGAAATAACATGTTGAAGAACTGTAATG < 41bp 1 0.541672088262473 1 0.768157482147217 experiment 0.916655823475055 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273298 chr11:65273305 . . 0 hm6A_associated_SNPs_68759 0 0 1 2 65273302 65273323 lncRNA hsa-miR-338-3p MALAT1 miRanda starBase2
14034 chr11 65273305 65273305 1 + C G THCA 65273298 + 65273278 65273318 41 AACCAGTAAGTGGAGAAATAACATGTTCAAGAACTGTAATG AACCAGTAAGTGGAGAAATAACATGTTGAAGAACTGTAATG < 41bp 1 0.541672088262473 1 0.768157482147217 experiment 0.916655823475055 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273298 chr11:65273305 . . 0 hm6A_associated_SNPs_68759 0 0 1 2 65273294 65273316 lncRNA hsa-miR-582-5p MALAT1 miRanda starBase2
14034 chr11 65273305 65273305 1 + C G THCA 65273310 + 65273290 65273330 41 GAGAAATAACATGTTCAAGAACTGTAATGCTGGGTGGGAAC GAGAAATAACATGTTGAAGAACTGTAATGCTGGGTGGGAAC < 41bp 1 0.633285860697124 1 0.923036694526672 experiment 0.733428278605752 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273310 chr11:65273305 . . 0 hm6A_associated_SNPs_68760 0 0 1 2 65273302 65273323 lncRNA hsa-miR-338-3p MALAT1 miRanda starBase2
14034 chr11 65273305 65273305 1 + C G THCA 65273310 + 65273290 65273330 41 GAGAAATAACATGTTCAAGAACTGTAATGCTGGGTGGGAAC GAGAAATAACATGTTGAAGAACTGTAATGCTGGGTGGGAAC < 41bp 1 0.633285860697124 1 0.923036694526672 experiment 0.733428278605752 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273310 chr11:65273305 . . 0 hm6A_associated_SNPs_68760 0 0 1 2 65273294 65273316 lncRNA hsa-miR-582-5p MALAT1 miRanda starBase2
14034 chr11 67201890 67201890 1 + C T THCA 67201906 + 67201886 67201926 41 CACACGGCAGACGCCGGTGGACAGTCCTGATGACACAGCCC CACATGGCAGACGCCGGTGGACAGTCCTGATGACACAGCCC < 41bp 1 0.625059964751664 1 0.955264866352081 experiment 0.749880070496672 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 5 RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201906 chr11:67201890 nonsynonymous SNV 0.975 3 hm6A_associated_SNPs_68768 0 0 1 1 67201876 67201898 mRNA hsa-miR-346 RPS6KB2 miRanda miRanda
14034 chr6 137147485 137147485 1 + G A THCA 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATATGACTTGGAGTGAGAACAACGAACATGTCCTCATCA < 41bp 1 0.769892435808756 1 0.0396073758602142 experiment 0.460215128382488 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147485 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_68769 0 0 1 1 137147472 137147492 mRNA hsa-miR-224 PEX7 miRanda miRanda
14034 chr5 76331518 76331518 1 + A G THCA 76331538 + 76331518 76331558 41 ACAGAAAATGTTAAATATAGACAAGTGGACCATTTTGCCTC GCAGAAAATGTTAAATATAGACAAGTGGACCATTTTGCCTC < 41bp 1 0.662315587375304 1 0.981171667575836 experiment 0.675368825249392 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331538 chr5:76331518 nonsynonymous SNV 0.173 0 hm6A_associated_SNPs_68829 0 0 1 1 76331509 76331530 mRNA hsa-miR-543 AGGF1 miRanda miRanda
14034 chr6 96999777 96999777 1 + A G THCA 96999784 + 96999764 96999804 41 TATTATGGTGAAAAGGGGAGACAAAAAAAGGGAAAGGTAAC TATTATGGTGAAAGGGGGAGACAAAAAAAGGGAAAGGTAAC < 41bp 1 0.767740214396244 1 0.138413608074188 experiment 0.464519571207513 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 UFL1 ENSG00000014123 CDS Human protein_coding chr6:96999784 chr6:96999777 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_68843 0 0 1 1 96999776 96999797 mRNA hsa-miR-211 KIAA0776 miRanda miRanda
14034 chr5 96215823 96215823 1 + A G THCA 96215827 + 96215807 96215847 41 TTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCC TTGAGTTACCCTGCTCGTGAACAAATTGCACTGCTGGTTCC < 41bp 1 0.78045987481997 1 0.96500039100647 experiment 0.439080250360059 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ERAP2 ENSG00000164308 CDS Human protein_coding chr5:96215827 chr5:96215823 nonsynonymous SNV 0.966 1 hm6A_associated_SNPs_68847 0 0 0 5 96215819 96215840 mRNA hsa-miR-148a ERAP2 miRanda miRanda
14034 chr5 96215823 96215823 1 + A G THCA 96215827 + 96215807 96215847 41 TTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCC TTGAGTTACCCTGCTCGTGAACAAATTGCACTGCTGGTTCC < 41bp 1 0.78045987481997 1 0.96500039100647 experiment 0.439080250360059 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ERAP2 ENSG00000164308 CDS Human protein_coding chr5:96215827 chr5:96215823 nonsynonymous SNV 0.966 1 hm6A_associated_SNPs_68847 0 0 0 5 96215817 96215839 mRNA hsa-miR-130a ERAP2 miRanda miRanda
14034 chr5 96215823 96215823 1 + A G THCA 96215827 + 96215807 96215847 41 TTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCC TTGAGTTACCCTGCTCGTGAACAAATTGCACTGCTGGTTCC < 41bp 1 0.78045987481997 1 0.96500039100647 experiment 0.439080250360059 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ERAP2 ENSG00000164308 CDS Human protein_coding chr5:96215827 chr5:96215823 nonsynonymous SNV 0.966 1 hm6A_associated_SNPs_68847 0 0 0 5 96215820 96215840 mRNA hsa-miR-152 ERAP2 miRanda miRanda
14034 chr5 96215823 96215823 1 + A G THCA 96215827 + 96215807 96215847 41 TTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCC TTGAGTTACCCTGCTCGTGAACAAATTGCACTGCTGGTTCC < 41bp 1 0.78045987481997 1 0.96500039100647 experiment 0.439080250360059 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ERAP2 ENSG00000164308 CDS Human protein_coding chr5:96215827 chr5:96215823 nonsynonymous SNV 0.966 1 hm6A_associated_SNPs_68847 0 0 0 5 96215812 96215839 mRNA hsa-miR-130b ERAP2 miRanda miRanda
14034 chr5 96215823 96215823 1 + A G THCA 96215827 + 96215807 96215847 41 TTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCC TTGAGTTACCCTGCTCGTGAACAAATTGCACTGCTGGTTCC < 41bp 1 0.78045987481997 1 0.96500039100647 experiment 0.439080250360059 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 17 ERAP2 ENSG00000164308 CDS Human protein_coding chr5:96215827 chr5:96215823 nonsynonymous SNV 0.966 1 hm6A_associated_SNPs_68847 0 0 0 5 96215819 96215840 mRNA hsa-miR-148b ERAP2 miRanda miRanda
14034 chr21 37445106 37445106 1 + T G THCA 37445094 + 37445074 37445114 41 GCCCAGAAGAAGGTGCAGAGACCCCTGTGTACTTGGCCCTT GCCCAGAAGAAGGTGCAGAGACCCCTGTGTACGTGGCCCTT < 41bp 1 0.715601242503354 1 0.853244543075562 experiment 0.568797514993292 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 CBR1 ENSG00000159228 CDS Human protein_coding chr21:37445094 chr21:37445106 nonsynonymous SNV 0.989 3 hm6A_associated_SNPs_68849 0 0 1 1 37445088 37445108 mRNA hsa-miR-224 CBR1 miRanda miRanda
14034 chrX 153662756 153662756 1 + A G THCA 153662751 + 153662731 153662771 41 CTCACCTTTGGGGTGCAGGAACTCAACCTGACTGGCTCCTT CTCACCTTTGGGGTGCAGGAACTCAGCCTGACTGGCTCCTT < 41bp 1 0.305968259259982 1 0.304465055465698 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153662751 chrX:153662756 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_68898 0 0 1 1 153662740 153662761 mRNA hsa-miR-125a-3p ATP6AP1 miRanda miRanda
14034 chr2 238939226 238939226 1 + C T THCA 238939246 + 238939226 238939266 41 CTGGCTGGGCTCCCACAAGAACATTAAAGGTAGAGTCTGTG TTGGCTGGGCTCCCACAAGAACATTAAAGGTAGAGTCTGTG < 41bp 1 0.450505825702109 1 0.341550350189209 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 1 UBE2F ENSG00000184182 CDS Human protein_coding chr2:238939246 chr2:238939226 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_68912 0 0 1 1 238939206 238939229 mRNA hsa-miR-148b UBE2F miRanda miRanda
14034 chr5 40979879 40979879 1 + C G THCA 40979882 + 40979862 40979902 41 GCAAAAGGATACTGCCTCTGACAGTTTGCAAGATGCATGTT GCAAAAGGATACTGCCTGTGACAGTTTGCAAGATGCATGTT < 41bp 1 0.275119009532156 1 0.496994525194168 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 18 C7 ENSG00000112936 CDS Human protein_coding chr5:40979882 chr5:40979879 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_68927 0 0 0 1 40979877 40979902 mRNA hsa-miR-217 C7 miRanda miRanda
14034 chr2 173457750 173457750 1 + G T THCA 173457753 + 173457733 173457773 41 ATTCCCTAGAGGGTTACGGGACAGATGCAGTTATCTACATT ATTCCCTAGAGGGTTACTGGACAGATGCAGTTATCTACATT < 41bp 1 0.488911581429475 1 0.851982593536377 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 18 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173457753 chr2:173457750 nonsynonymous SNV 0.911 4 hm6A_associated_SNPs_68938 0 0 1 1 173457742 173457764 mRNA hsa-miR-217 PDK1 miRanda miRanda
14034 chr8 27634549 27634549 1 + G A THYM 27634567 + 27634547 27634587 41 TTGAAGATTCTGATGTAGAGACTGTCAGTGAAAAAAAAACT TTAAAGATTCTGATGTAGAGACTGTCAGTGAAAAAAAAACT < 41bp 1 0.689005585656585 1 0.988730430603027 experiment 0.62198882868683 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634567 chr8:27634549 nonsynonymous SNV 0.076 0 hm6A_associated_SNPs_68995 0 0 1 1 27634535 27634556 mRNA hsa-miR-216a ESCO2 miRanda miRanda
14034 chr1 14057589 14057589 1 + C G UCEC 14057598 + 14057578 14057618 41 GCTTTTCCCTTCTGCTGTTGACAAGACCCGGATTGGTGAGT GCTTTTCCCTTGTGCTGTTGACAAGACCCGGATTGGTGAGT < 41bp 1 0.32174181705146 1 0.0711115002632141 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14057598 chr1:14057589 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_69053 0 0 1 2 14057579 14057600 mRNA hsa-miR-505 PRDM2 miRanda miRanda
14034 chr1 14057589 14057589 1 + C G UCEC 14057598 + 14057578 14057618 41 GCTTTTCCCTTCTGCTGTTGACAAGACCCGGATTGGTGAGT GCTTTTCCCTTGTGCTGTTGACAAGACCCGGATTGGTGAGT < 41bp 1 0.32174181705146 1 0.0711115002632141 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14057598 chr1:14057589 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_69053 0 0 1 2 14057578 14057599 mRNA hsa-miR-421 PRDM2 miRanda miRanda
14034 chr10 75673855 75673855 1 + C T UCEC 75673860 + 75673840 75673880 41 ACACAAGGACTACAGCGCTGACACGCTTGCTCACCACAACG ACACAAGGACTACAGTGCTGACACGCTTGCTCACCACAACG < 41bp 1 0.467296242796136 1 0.955728650093079 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 16 PLAU ENSG00000122861 CDS Human protein_coding chr10:75673860 chr10:75673855 synonymous SNV . 0 hm6A_associated_SNPs_69061 0 0 0 1 75673849 75673871 mRNA hsa-miR-503 PLAU miRanda miRanda
14034 chr1 63836701 63836701 1 + G A UCEC 63836706 + 63836686 63836726 41 TAGGACTAACAGTACGATGGACAGTGTCTCTTAATTCTTAT TAGGACTAACAGTACAATGGACAGTGTCTCTTAATTCTTAT < 41bp 1 0.56958221287195 1 0.983949720859528 experiment 0.8608355742561 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 16 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836706 chr1:63836701 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_69090 0 0 1 1 63836681 63836704 mRNA hsa-miR-487b ALG6 miRanda miRanda
14034 chr5 175722136 175722136 1 + A T UCEC 175722117 + 175722097 175722137 41 AAGAGAATTTTCCTCTGGGGACTGTGCAGTTTTTGATGGAC AAGAGAATTTTCCTCTGGGGACTGTGCAGTTTTTGATGGTC < 41bp 1 0.478139465378108 1 0.902049660682678 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175722117 chr5:175722136 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_69097 0 0 0 1 175722134 175722156 mRNA hsa-miR-299-3p C5orf25 miRanda miRanda
14034 chr14 90499522 90499522 1 + C T UCEC 90499542 + 90499522 90499562 41 CCATATGATTTGCCTCCAGAACTGTATGGAAGTAAAGGTGA TCATATGATTTGCCTCCAGAACTGTATGGAAGTAAAGGTGA < 41bp 1 0.197674463364863 1 0.709256887435913 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 TDP1 ENSG00000042088 CDS Human protein_coding chr14:90499542 chr14:90499522 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_69116 0 0 1 1 90499505 90499526 mRNA hsa-miR-183 TDP1 miRanda miRanda
14034 chr2 135888225 135888225 1 + A C UCEC 135888234 + 135888214 135888254 41 GCAAAGAAGAAAATCCGAAAACACAGAGGTGTAGAGGAGTC GCAAAGAAGAACATCCGAAAACACAGAGGTGTAGAGGAGTC < 41bp 1 0.797929925954725 1 0.060638427734375 experiment 0.404140148090551 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135888234 chr2:135888225 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_69142 0 0 1 1 135888221 135888244 mRNA hsa-miR-10a RAB3GAP1 miRanda miRanda
14034 chr8 124138801 124138801 1 + G T UCEC 124138793 + 124138773 124138813 41 CTGTGTTCTCAGAAGTGCTGACAAGAGAGGAGTGGCTGAAA CTGTGTTCTCAGAAGTGCTGACAAGAGATGAGTGGCTGAAA < 41bp 1 0.642091341354671 1 0.00492259860038757 experiment 0.715817317290657 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124138793 chr8:124138801 nonsynonymous SNV 0.953 1 hm6A_associated_SNPs_69174 0 0 1 1 124138789 124138812 mRNA hsa-miR-197 WDR67 miRanda miRanda
14034 chr19 9453179 9453179 1 + A T UCEC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGAGAAATGCCT < 41bp 1 0.530292277637093 1 0.98308002948761 experiment 0.939415444725815 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453179 nonsynonymous SNV 0.987 3 hm6A_associated_SNPs_69179 0 0 0 4 9453169 9453193 mRNA hsa-miR-181a ZNF559 miRanda miRanda
14034 chr19 9453179 9453179 1 + A T UCEC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGAGAAATGCCT < 41bp 1 0.530292277637093 1 0.98308002948761 experiment 0.939415444725815 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453179 nonsynonymous SNV 0.987 3 hm6A_associated_SNPs_69179 0 0 0 4 9453169 9453193 mRNA hsa-miR-181b ZNF559 miRanda miRanda
14034 chr19 9453179 9453179 1 + A T UCEC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGAGAAATGCCT < 41bp 1 0.530292277637093 1 0.98308002948761 experiment 0.939415444725815 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453179 nonsynonymous SNV 0.987 3 hm6A_associated_SNPs_69179 0 0 0 4 9453172 9453193 mRNA hsa-miR-181c ZNF559 miRanda miRanda
14034 chr19 9453179 9453179 1 + A T UCEC 9453163 + 9453143 9453183 41 GTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCT GTCTTATAAAACACAGGCGAACTCACACTGGAGAAATGCCT < 41bp 1 0.530292277637093 1 0.98308002948761 experiment 0.939415444725815 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 37 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453163 chr19:9453179 nonsynonymous SNV 0.987 3 hm6A_associated_SNPs_69179 0 0 0 4 9453165 9453193 mRNA hsa-miR-181d ZNF559 miRanda miRanda
14034 chr13 52605227 52605227 1 + G T UCEC 52605235 + 52605215 52605255 41 CGTCACAATAAAGAAGAAAAACTGTAGGTTGTGTAGCTGGA CGTCACAATAAATAAGAAAAACTGTAGGTTGTGTAGCTGGA < 41bp 1 0.779714226488801 1 0.95820152759552 experiment 0.440571547022398 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 13 UTP14C ENSG00000253797 CDS Human protein_coding chr13:52605235 chr13:52605227 stopgain 0.309 0 hm6A_associated_SNPs_69193 0 0 1 1 52605221 52605242 mRNA hsa-miR-139-5p ALG11 miRanda miRanda
14034 chr19 56888939 56888939 1 + G T UCEC 56888929 + 56888909 56888949 41 AAAACCATATCAATGTAAGGACTGCAAAAAGACCTTTTGTC AAAACCATATCAATGTAAGGACTGCAAAAATACCTTTTGTC < 41bp 1 0.439787349566547 1 0.999673008918762 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 31 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888929 chr19:56888939 . . 0 hm6A_associated_SNPs_69199 0 0 1 1 56888919 56888939 mRNA hsa-miR-129-5p ZNF542 miRanda miRanda
14034 chr8 144358437 144358437 1 + C T UCEC 144358427 + 144358407 144358447 41 CGGCAAGAGTTTCAAGTATAACTCGCTGCTCCTGAAGCACC CGGCAAGAGTTTCAAGTATAACTCGCTGCTTCTGAAGCACC < 41bp 1 0.776522014322075 1 0.99681156873703 experiment 0.446955971355851 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GLI4 ENSG00000250571 CDS Human protein_coding chr8:144358427 chr8:144358437 synonymous SNV . 0 hm6A_associated_SNPs_69202 0 0 1 1 144358414 144358437 mRNA hsa-miR-503 ZFP41 miRanda miRanda
14034 chr10 70530990 70530990 1 + G A UCEC 70530980 + 70530960 70531000 41 TAGGTTTCATTGTTTGCGGAACTTTTCAACGAAATGCTTCA TAGGTTTCATTGTTTGCGGAACTTTTCAACAAAATGCTTCA < 41bp 1 0.209519231030881 1 0.768093466758728 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 31 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70530980 chr10:70530990 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_69216 0 0 1 1 70530987 70531009 mRNA hsa-miR-216b CCAR1 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGATACTTG < 41bp 1 0.33618094932902 1 0.981292366981506 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69257 0 0 1 4 63836649 63836668 mRNA hsa-miR-26a ALG6 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGATACTTG < 41bp 1 0.33618094932902 1 0.981292366981506 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69257 0 0 1 4 63836645 63836668 mRNA hsa-miR-26b ALG6 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGATACTTG < 41bp 1 0.33618094932902 1 0.981292366981506 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69257 0 0 1 4 63836652 63836675 mRNA hsa-miR-217 ALG6 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836646 + 63836626 63836666 41 CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGGTACTTG CCCCTCCCTAAATTTGAAGAACTATGGAGAAATGATACTTG < 41bp 1 0.33618094932902 1 0.981292366981506 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836646 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69257 0 0 1 4 63836650 63836668 mRNA hsa-miR-1297 ALG6 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGAGAAATGATACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.500506064674741 1 0.971026003360748 experiment 0.998987870650517 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69258 0 0 1 4 63836649 63836668 mRNA hsa-miR-26a ALG6 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGAGAAATGATACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.500506064674741 1 0.971026003360748 experiment 0.998987870650517 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69258 0 0 1 4 63836645 63836668 mRNA hsa-miR-26b ALG6 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGAGAAATGATACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.500506064674741 1 0.971026003360748 experiment 0.998987870650517 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69258 0 0 1 4 63836652 63836675 mRNA hsa-miR-217 ALG6 miRanda miRanda
14034 chr1 63836660 63836660 1 + G A UCEC 63836670 + 63836650 63836690 41 TGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGA TGGAGAAATGATACTTGATGACAGTAGTGGTTTTAATAGGA < 41bp 1 0.500506064674741 1 0.971026003360748 experiment 0.998987870650517 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 11 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63836670 chr1:63836660 stopgain 0.931 1 hm6A_associated_SNPs_69258 0 0 1 4 63836650 63836668 mRNA hsa-miR-1297 ALG6 miRanda miRanda
14034 chr11 75718615 75718615 1 + C T UCEC 75718609 + 75718589 75718629 41 TGAAGACTAATGCTCAGTTGACAATTCGTTGCAGGCAGTTA TGAAGACTAATGCTCAGTTGACAATTTGTTGCAGGCAGTTA < 41bp 1 0.461054854127548 1 0.00295668840408325 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718609 chr11:75718615 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_69349 0 0 1 1 75718611 75718633 mRNA hsa-miR-146a UVRAG miRanda miRanda
14034 chr16 58552344 58552344 1 + G A UCEC 58552363 + 58552343 58552383 41 CGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA CACTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA < 41bp 1 0.660522692811369 1 0.867243409156799 experiment 0.678954614377261 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552363 chr16:58552344 nonsynonymous SNV 0.707 3 hm6A_associated_SNPs_69357 0 0 0 1 58552341 58552362 mRNA hsa-miR-153 SETD6 miRanda miRanda
14034 chr2 160087396 160087396 1 + C T UCEC 160087387 + 160087367 160087407 41 TCCAGTCCACTCTCAAGAGAACAGGATAACTAAGACTGTTT TCCAGTCCACTCTCAAGAGAACAGGATAATTAAGACTGTTT < 41bp 1 0.752815188019694 1 0.975256979465485 experiment 0.494369623960611 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 TANC1 ENSG00000115183 CDS Human protein_coding chr2:160087387 chr2:160087396 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_69394 0 0 1 2 160087388 160087407 mRNA hsa-miR-212 TANC1 miRanda miRanda
14034 chr2 160087396 160087396 1 + C T UCEC 160087387 + 160087367 160087407 41 TCCAGTCCACTCTCAAGAGAACAGGATAACTAAGACTGTTT TCCAGTCCACTCTCAAGAGAACAGGATAATTAAGACTGTTT < 41bp 1 0.752815188019694 1 0.975256979465485 experiment 0.494369623960611 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 TANC1 ENSG00000115183 CDS Human protein_coding chr2:160087387 chr2:160087396 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_69394 0 0 1 2 160087387 160087407 mRNA hsa-miR-132 TANC1 miRanda miRanda
14034 chr2 160087396 160087396 1 + C T UCEC 160087395 + 160087375 160087415 41 ACTCTCAAGAGAACAGGATAACTAAGACTGTTTCTCATCTG ACTCTCAAGAGAACAGGATAATTAAGACTGTTTCTCATCTG Direct Loss 1 0.731399783188227 1 0.967720866203308 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 TANC1 ENSG00000115183 CDS Human protein_coding chr2:160087395 chr2:160087396 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_69395 0 0 1 2 160087388 160087407 mRNA hsa-miR-212 TANC1 miRanda miRanda
14034 chr2 160087396 160087396 1 + C T UCEC 160087395 + 160087375 160087415 41 ACTCTCAAGAGAACAGGATAACTAAGACTGTTTCTCATCTG ACTCTCAAGAGAACAGGATAATTAAGACTGTTTCTCATCTG Direct Loss 1 0.731399783188227 1 0.967720866203308 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 TANC1 ENSG00000115183 CDS Human protein_coding chr2:160087395 chr2:160087396 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_69395 0 0 1 2 160087387 160087407 mRNA hsa-miR-132 TANC1 miRanda miRanda
14034 chr3 9712787 9712787 1 + C T UCEC 9712773 + 9712753 9712793 41 TGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACC TGATAAGGTCAGAGGCTATGACATCAAGCTGCTTTGATACC < 41bp 1 0.700918770980566 1 0.0185993015766144 experiment 0.598162458038868 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 35 MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9712773 chr3:9712787 stopgain 0.999 1 hm6A_associated_SNPs_69447 0 0 1 1 9712781 9712804 mRNA hsa-miR-134 MTMR14 miRanda miRanda
14034 chr12 66698823 66698823 1 + G T UCEC 66698825 + 66698805 66698845 41 ATCTTAGGGAAACACTAAGAACTTTCCACAAGGAAACTGGA ATCTTAGGGAAACACTAATAACTTTCCACAAGGAAACTGGA < 41bp 1 0.376215154097366 1 0.883918285369873 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 19 HELB ENSG00000127311 CDS Human protein_coding chr12:66698825 chr12:66698823 nonsynonymous SNV 0.059 2 hm6A_associated_SNPs_69465 0 0 0 1 66698823 66698846 mRNA hsa-miR-145 HELB miRanda miRanda
14034 chr2 135891570 135891570 1 + G A UCEC 135891585 + 135891565 135891605 41 AATGCGTTTCCGATGGGAAAACAACTTTCTGATTCCAGGGT AATGCATTTCCGATGGGAAAACAACTTTCTGATTCCAGGGT < 41bp 1 0.643063365029241 1 0.0827202498912811 experiment 0.713873269941517 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135891585 chr2:135891570 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_69519 0 0 1 1 135891569 135891592 mRNA hsa-miR-382 RAB3GAP1 miRanda miRanda
14034 chr17 16343398 16343398 1 + A T UCEC 16343394 + 16343374 16343414 41 AAGTGCCGTCAGAAGCGATAACTGACGAAGACTACTCCTGT AAGTGCCGTCAGAAGCGATAACTGTCGAAGACTACTCCTGT < 41bp 1 0.57215650714706 1 0.470303356647491 experiment 0.85568698570588 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 25 SNORD49A ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16343394 chr17:16343398 . . 0 hm6A_associated_SNPs_69608 0 0 1 1 16343380 16343400 mRNA hsa-miR-223 SNORD49A miRanda miRanda
14034 chr1 145116016 145116016 1 + G T UCEC 145116007 + 145115987 145116027 41 TGGAACTTCTGCCTCTAAAGACCTTGCAAGAAAAGAGATGT TGGAACTTCTGCCTCTAAAGACCTTGCAATAAAAGAGATGT < 41bp 1 0.388182029901785 1 0.703737020492554 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145116007 chr1:145116016 . . 0 hm6A_associated_SNPs_69621 0 0 1 1 145116001 145116019 mRNA hsa-miR-431 SEC22B miRanda miRanda
14034 chr12 88548148 88548148 1 + A G UCEC 88548153 + 88548133 88548173 41 TACCAGATCAAAAGGACCAGACAATTCCATAAGTACATGTC TACCAGATCAAAAGGGCCAGACAATTCCATAAGTACATGTC < 41bp 1 0.455397753693727 1 0.560189723968506 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88548153 chr12:88548148 synonymous SNV . 0 hm6A_associated_SNPs_69644 0 0 1 3 88548132 88548153 mRNA hsa-miR-133a TMTC3 miRanda miRanda
14034 chr12 88548148 88548148 1 + A G UCEC 88548153 + 88548133 88548173 41 TACCAGATCAAAAGGACCAGACAATTCCATAAGTACATGTC TACCAGATCAAAAGGGCCAGACAATTCCATAAGTACATGTC < 41bp 1 0.455397753693727 1 0.560189723968506 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88548153 chr12:88548148 synonymous SNV . 0 hm6A_associated_SNPs_69644 0 0 1 3 88548132 88548153 mRNA hsa-miR-133b TMTC3 miRanda miRanda
14034 chr12 88548148 88548148 1 + A G UCEC 88548153 + 88548133 88548173 41 TACCAGATCAAAAGGACCAGACAATTCCATAAGTACATGTC TACCAGATCAAAAGGGCCAGACAATTCCATAAGTACATGTC < 41bp 1 0.455397753693727 1 0.560189723968506 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 16 TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88548153 chr12:88548148 synonymous SNV . 0 hm6A_associated_SNPs_69644 0 0 1 3 88548140 88548161 mRNA hsa-miR-613 TMTC3 miRanda miRanda
14034 chr14 54866633 54866633 1 + G T UCEC 54866627 + 54866607 54866647 41 TGAAGCCCAGTTCAATACAAACAAGTGAGTTTGACTCATCA TGAAGCCCAGTTCAATACAAACAAGTTAGTTTGACTCATCA < 41bp 1 0.699368897243156 1 0.0103296935558319 experiment 0.601262205513688 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 27 CDKN3 ENSG00000100526 CDS Human protein_coding chr14:54866627 chr14:54866633 stopgain 0.999 1 hm6A_associated_SNPs_69698 0 0 1 1 54866623 54866642 mRNA hsa-miR-371-5p CDKN3 miRanda miRanda
14034 chr1 63877663 63877663 1 + C A UCEC 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTATTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.54477666058383 1 0.0102327466011047 experiment 0.91044667883234 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877663 nonsynonymous SNV 0.992 5 hm6A_associated_SNPs_69725 0 0 0 3 63877657 63877678 mRNA hsa-miR-204 ALG6 miRanda miRanda
14034 chr1 63877663 63877663 1 + C A UCEC 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTATTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.54477666058383 1 0.0102327466011047 experiment 0.91044667883234 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877663 nonsynonymous SNV 0.992 5 hm6A_associated_SNPs_69725 0 0 0 3 63877657 63877678 mRNA hsa-miR-211 ALG6 miRanda miRanda
14034 chr1 63877663 63877663 1 + C A UCEC 63877678 + 63877658 63877698 41 CCATTCTTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG CCATTATTTACAGAAAGGGAACAAACCCTGCAGGTTCTAAG < 41bp 1 0.54477666058383 1 0.0102327466011047 experiment 0.91044667883234 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877678 chr1:63877663 nonsynonymous SNV 0.992 5 hm6A_associated_SNPs_69725 0 0 0 3 63877646 63877667 mRNA hsa-miR-186 ALG6 miRanda miRanda
14034 chr5 134146947 134146947 1 + C T UCEC 134146960 + 134146940 134146980 41 TCAAGCTCGCTATGCTGGTGACATAATTAAAGCTCTTGAAT TCAAGCTTGCTATGCTGGTGACATAATTAAAGCTCTTGAAT < 41bp 1 0.753300861455969 1 0.0776646733283997 experiment 0.493398277088061 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 8 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134146960 chr5:134146947 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_69740 0 0 1 2 134146938 134146958 mRNA hsa-miR-338-3p DDX46 miRanda miRanda
14034 chr5 134146947 134146947 1 + C T UCEC 134146960 + 134146940 134146980 41 TCAAGCTCGCTATGCTGGTGACATAATTAAAGCTCTTGAAT TCAAGCTTGCTATGCTGGTGACATAATTAAAGCTCTTGAAT < 41bp 1 0.753300861455969 1 0.0776646733283997 experiment 0.493398277088061 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 8 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134146960 chr5:134146947 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_69740 0 0 1 2 134146919 134146947 mRNA hsa-miR-590-5p DDX46 miRanda miRanda
14034 chr10 1038573 1038573 1 + A C UCEC 1038563 + 1038543 1038583 41 CAACAGAATTACCATGATAGACTTTCACAAATTCTAACAGA CAACAGAATTACCATGATAGACTTTCACAACTTCTAACAGA < 41bp 1 0.56911598308457 1 0.91133451461792 experiment 0.86176803383086 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1038563 chr10:1038573 nonsynonymous SNV 0.940 2 hm6A_associated_SNPs_69747 0 0 1 2 1038572 1038593 mRNA hsa-miR-491-5p GTPBP4 miRanda miRanda
14034 chr10 1038573 1038573 1 + A C UCEC 1038563 + 1038543 1038583 41 CAACAGAATTACCATGATAGACTTTCACAAATTCTAACAGA CAACAGAATTACCATGATAGACTTTCACAACTTCTAACAGA < 41bp 1 0.56911598308457 1 0.91133451461792 experiment 0.86176803383086 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 31 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1038563 chr10:1038573 nonsynonymous SNV 0.940 2 hm6A_associated_SNPs_69747 0 0 1 2 1038552 1038573 mRNA hsa-miR-758 GTPBP4 miRanda miRanda
14034 chr14 76620935 76620935 1 + C T UCEC 76620953 + 76620933 76620973 41 GTCGAGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGAT GTTGAGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGAT < 41bp 1 0.648672903384383 1 0.979204058647156 experiment 0.702654193231235 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76620953 chr14:76620935 stopgain 0.999 0 hm6A_associated_SNPs_69800 0 0 1 1 76620934 76620958 mRNA hsa-miR-96 C14orf118 miRanda miRanda
14034 chr15 90772576 90772576 1 + G A UCEC 90772579 + 90772559 90772599 41 AGCTCAGGAGAGATTTCGTGACAATGTACGCCTTTCCCTCA AGCTCAGGAGAGATTTCATGACAATGTACGCCTTTCCCTCA < 41bp 1 0.726428736369821 1 0.944143176078796 experiment 0.547142527260359 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90772579 chr15:90772576 synonymous SNV . 0 hm6A_associated_SNPs_69803 0 0 1 2 90772568 90772590 mRNA hsa-miR-221 SEMA4B miRanda miRanda
14034 chr15 90772576 90772576 1 + G A UCEC 90772579 + 90772559 90772599 41 AGCTCAGGAGAGATTTCGTGACAATGTACGCCTTTCCCTCA AGCTCAGGAGAGATTTCATGACAATGTACGCCTTTCCCTCA < 41bp 1 0.726428736369821 1 0.944143176078796 experiment 0.547142527260359 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90772579 chr15:90772576 synonymous SNV . 0 hm6A_associated_SNPs_69803 0 0 1 2 90772561 90772584 mRNA hsa-miR-363 SEMA4B miRanda miRanda
14034 chr19 994024 994024 1 + G A UCEC 994041 + 994021 994061 41 CTCGGAGCCCAGCTACCTGGACCGCACGGAGCAGCTGCAGG CTCAGAGCCCAGCTACCTGGACCGCACGGAGCAGCTGCAGG < 41bp 1 0.176875097839249 1 0.913131237030029 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 4 WDR18 ENSG00000065268 CDS Human protein_coding chr19:994041 chr19:994024 synonymous SNV . 0 hm6A_associated_SNPs_69848 0 0 1 1 994019 994026 mRNA hsa-miR-615-3p WDR18 miRanda miRanda
14034 chr18 23866150 23866150 1 + C T UCEC 23866155 + 23866135 23866175 41 CAGGAGGAACAACAGCTGGAACTGGTTTGCTTCAGACTTCA CAGGAGGAACAACAGTTGGAACTGGTTTGCTTCAGACTTCA < 41bp 1 0.70937617244692 1 0.99914413690567 experiment 0.58124765510616 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23866155 chr18:23866150 nonsynonymous SNV 0.965 1 hm6A_associated_SNPs_69868 0 0 0 1 23866132 23866154 mRNA hsa-miR-199a-5p TAF4B miRanda miRanda
14034 chr18 23866150 23866150 1 + C T UCEC 23866170 + 23866150 23866190 41 CTGGAACTGGTTTGCTTCAGACTTCAAAACCACTTGTGACA TTGGAACTGGTTTGCTTCAGACTTCAAAACCACTTGTGACA < 41bp 1 0.711730259074349 1 0.998426079750061 experiment 0.576539481851301 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 TAF4B ENSG00000141384 CDS Human protein_coding chr18:23866170 chr18:23866150 nonsynonymous SNV 0.965 1 hm6A_associated_SNPs_69869 0 0 0 1 23866132 23866154 mRNA hsa-miR-199a-5p TAF4B miRanda miRanda
14034 chr10 131969855 131969855 1 + A C UCEC 131969871 + 131969851 131969891 41 GCAAAATGTGGATTCAGCAAACAAATTCTGGAAATACTAAA GCAACATGTGGATTCAGCAAACAAATTCTGGAAATACTAAA < 41bp 1 0.517857337767992 1 0.00164309144020081 experiment 0.964285324464015 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131969871 chr10:131969855 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_69879 0 0 1 2 131969848 131969862 mRNA hsa-miR-23a GLRX3 miRanda miRanda
14034 chr10 131969855 131969855 1 + A C UCEC 131969871 + 131969851 131969891 41 GCAAAATGTGGATTCAGCAAACAAATTCTGGAAATACTAAA GCAACATGTGGATTCAGCAAACAAATTCTGGAAATACTAAA < 41bp 1 0.517857337767992 1 0.00164309144020081 experiment 0.964285324464015 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131969871 chr10:131969855 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_69879 0 0 1 2 131969848 131969862 mRNA hsa-miR-23b GLRX3 miRanda miRanda
14034 chr18 32889160 32889160 1 + C A UCEC 32889179 + 32889159 32889199 41 TCTTGTCATCTATAGATTGAACAAAAAGTGGTAGCTGTGAA TATTGTCATCTATAGATTGAACAAAAAGTGGTAGCTGTGAA < 41bp 1 0.101094353846038 1 0.00311726331710815 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 2 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32889179 chr18:32889160 . . 0 hm6A_associated_SNPs_69917 0 0 1 1 32889151 32889175 mRNA hsa-miR-376b ZNF271 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273135 152273156 mRNA hsa-miR-17 RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273135 152273156 mRNA hsa-miR-20a RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273131 152273156 mRNA hsa-miR-93 RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273135 152273156 mRNA hsa-miR-106a RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273137 152273156 mRNA hsa-miR-106b RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273127 152273155 mRNA hsa-miR-302a RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273127 152273155 mRNA hsa-miR-302b RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273132 152273155 mRNA hsa-miR-302c RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273133 152273155 mRNA hsa-miR-302d RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273127 152273155 mRNA hsa-miR-372 RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273134 152273155 mRNA hsa-miR-373 RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273135 152273156 mRNA hsa-miR-20b RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273135 152273155 mRNA hsa-miR-520e RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273134 152273155 mRNA hsa-miR-520a-3p RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273135 152273155 mRNA hsa-miR-520b RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273134 152273155 mRNA hsa-miR-520c-3p RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273134 152273156 mRNA hsa-miR-519d RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273135 152273155 mRNA hsa-miR-520d-3p RIF1 miRanda miRanda
14034 chr2 152273141 152273141 1 + G A UCEC 152273129 + 152273109 152273149 41 TGATACCATTAAGAATTCAGACAAAAATGTACGTACTAGAG TGATACCATTAAGAATTCAGACAAAAATGTACATACTAGAG < 41bp 1 0.706531213184615 1 0.550248146057129 experiment 0.58693757363077 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273129 chr2:152273141 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_69918 0 0 1 19 152273139 152273155 mRNA hsa-miR-302e RIF1 miRanda miRanda
14034 chr11 86017321 86017321 1 + A C UCEC 86017333 + 86017313 86017353 41 AGAGGATAAATTTGTTTTTGACTTACCTGATTATGAAAGTA AGAGGATACATTTGTTTTTGACTTACCTGATTATGAAAGTA < 41bp 1 0.316516786683012 1 0.201918035745621 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017333 chr11:86017321 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_69939 0 0 1 2 86017317 86017337 mRNA hsa-miR-224 C11orf73 miRanda miRanda
14034 chr11 86017321 86017321 1 + A C UCEC 86017333 + 86017313 86017353 41 AGAGGATAAATTTGTTTTTGACTTACCTGATTATGAAAGTA AGAGGATACATTTGTTTTTGACTTACCTGATTATGAAAGTA < 41bp 1 0.316516786683012 1 0.201918035745621 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017333 chr11:86017321 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_69939 0 0 1 2 86017308 86017329 mRNA hsa-miR-495 C11orf73 miRanda miRanda
14034 chr7 104747871 104747871 1 + A G UCEC 104747866 + 104747846 104747886 41 CTTTTAGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAA CTTTTAGAAATTCTAATTTAACTGAGCTGGGTCTGCAAGAA < 41bp 1 0.704669066033509 1 0.928435564041138 experiment 0.590661867932981 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747866 chr7:104747871 synonymous SNV . 0 hm6A_associated_SNPs_69942 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chrX 41204491 41204491 1 + C T UCEC 41204505 + 41204485 41204525 41 CAGATTCGTAGAATAGTCGAACAAGATACTATGCCTCCAAA CAGATTTGTAGAATAGTCGAACAAGATACTATGCCTCCAAA < 41bp 1 0.650640529992013 1 0.182313352823257 experiment 0.698718940015974 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41204505 chrX:41204491 nonsynonymous SNV 0.589 4 hm6A_associated_SNPs_69962 1 0 1 1 41204486 41204509 mRNA hsa-miR-375 DDX3X miRanda miRanda
14034 chr15 90167441 90167441 1 + G A UCEC 90167442 + 90167422 90167462 41 GACCAGGGAATTCAACTGTGACTTCTTCCCCACCTGTTACG GACCAGGGAATTCAACTGTAACTTCTTCCCCACCTGTTACG < 41bp 1 0.593132660829906 1 0.992564737796783 experiment 0.813734678340187 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 TICRR ENSG00000140534 CDS Human protein_coding chr15:90167442 chr15:90167441 synonymous SNV . 0 hm6A_associated_SNPs_70005 0 0 1 1 90167425 90167446 mRNA hsa-miR-224 C15orf42 miRanda miRanda
14034 chr16 31141378 31141378 1 + T A UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCAGGACCATAAGACACTGTACTTTG < 41bp 1 0.347205400295024 1 0.97828483581543 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141378 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70009 0 0 1 4 31141374 31141396 mRNA hsa-miR-199a-5p MYST1 miRanda miRanda
14034 chr16 31141378 31141378 1 + T A UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCAGGACCATAAGACACTGTACTTTG < 41bp 1 0.347205400295024 1 0.97828483581543 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141378 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70009 0 0 1 4 31141373 31141394 mRNA hsa-miR-187 MYST1 miRanda miRanda
14034 chr16 31141378 31141378 1 + T A UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCAGGACCATAAGACACTGTACTTTG < 41bp 1 0.347205400295024 1 0.97828483581543 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141378 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70009 0 0 1 4 31141374 31141396 mRNA hsa-miR-199b-5p MYST1 miRanda miRanda
14034 chr16 31141378 31141378 1 + T A UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCAGGACCATAAGACACTGTACTTTG < 41bp 1 0.347205400295024 1 0.97828483581543 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141378 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70009 0 0 1 4 31141377 31141397 mRNA hsa-miR-128 MYST1 miRanda miRanda
14034 chr22 35719515 35719515 1 + G A UCEC 35719525 + 35719505 35719545 41 TCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTAT TCCGCAGCTCACCCGATCTGACAGGTGTGGTCACCATCTAT < 41bp 1 0.464919911605198 1 0.599331974983215 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 11 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719525 chr22:35719515 nonsynonymous SNV . 0 hm6A_associated_SNPs_70025 0 0 1 1 35719509 35719533 mRNA hsa-miR-10a TOM1 miRanda miRanda
14034 chrX 24228399 24228399 1 + A G UCEC 24228412 + 24228392 24228432 41 TTTGAAAAGGCACATGAAAAACCATCCCGAACACCTTGCCA TTTGAAAGGGCACATGAAAAACCATCCCGAACACCTTGCCA < 41bp 1 0.663088705838192 1 0.986593127250671 experiment 0.673822588323615 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ZFX ENSG00000005889 CDS Human protein_coding chrX:24228412 chrX:24228399 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_70028 0 0 1 1 24228386 24228407 mRNA hsa-miR-455-5p ZFX miRanda miRanda
14034 chr11 65272886 65272886 1 + T G UCEC 65272867 + 65272847 65272887 41 GTACCCCTGGGCTTCTCTTAACATTTAAGCAAGCTGTTTTT GTACCCCTGGGCTTCTCTTAACATTTAAGCAAGCTGTTTGT < 41bp 1 0.317041438665603 1 0.822755575180054 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272867 chr11:65272886 . . 0 hm6A_associated_SNPs_70050 0 0 1 1 65272886 65272906 lncRNA hsa-miR-126-5p MALAT1 miRanda starBase2
14034 chr12 32884055 32884055 1 + T G UCEC 32884040 + 32884020 32884060 41 TGGTGGCCTTAACACTATTGACATTTTGACTGCCATTAGAA TGGTGGCCTTAACACTATTGACATTTTGACTGCCAGTAGAA < 41bp 1 0.739755066811464 1 0.88796067237854 experiment 0.520489866377073 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31548708;GSE125780;DART-seq;HEK293T;Control 36 DNM1L ENSG00000087470 CDS Human protein_coding chr12:32884040 chr12:32884055 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70081 0 0 0 1 32884036 32884056 mRNA hsa-miR-183 DNM1L miRanda miRanda
14034 chr1 82456267 82456267 1 + G A UCEC 82456281 + 82456261 82456301 41 ACTTACGGGGCAGCAGCAAGACTCACAACCTCGAGCTCACG ACTTACAGGGCAGCAGCAAGACTCACAACCTCGAGCTCACG < 41bp 1 0.708718195644763 1 0.997617602348328 experiment 0.582563608710473 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 7 ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456281 chr1:82456267 nonsynonymous SNV 0.980 4 hm6A_associated_SNPs_70112 0 0 1 1 82456264 82456283 mRNA hsa-miR-431 LPHN2 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-let-7a XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-let-7b XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-let-7c XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-let-7d XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-let-7e XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-let-7f XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-miR-98 XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320387 41320408 mRNA hsa-let-7g XPNPEP3 miRanda miRanda
14034 chr22 41320408 41320408 1 + G A UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCAGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.464799945559285 1 0.00466281175613403 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320408 nonsynonymous SNV 0.932 5 hm6A_associated_SNPs_70114 0 0 1 9 41320385 41320408 mRNA hsa-let-7i XPNPEP3 miRanda miRanda
14034 chr9 139310776 139310776 1 + A G UCEC 139310791 + 139310771 139310811 41 GGTCCAGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC GGTCCGGTTTGAGCTGGAGGACCTGAACCTGCGGCCTGACC < 41bp 1 0.600834677942474 1 0.960326373577118 experiment 0.798330644115053 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310791 chr9:139310776 nonsynonymous SNV 0.964 0 hm6A_associated_SNPs_70115 0 0 1 1 139310765 139310784 mRNA hsa-miR-371-5p PMPCA miRanda miRanda
14034 chr6 31595815 31595815 1 + C T UCEC 31595832 + 31595812 31595852 41 CCACCTGCAGTCCCTAAAGAACTCCCTGCACCTCCAGCTCC CCATCTGCAGTCCCTAAAGAACTCCCTGCACCTCCAGCTCC < 41bp 1 0.748194360200915 1 0.999156355857849 experiment 0.50361127959817 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 4 PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31595832 chr6:31595815 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_70123 0 0 1 1 31595800 31595820 mRNA hsa-miR-138 BAT2 miRanda miRanda
14034 chr7 6063097 6063097 1 - G A UCEC 6063089 - 6063069 6063109 41 TTTACTGCTTCCCTCTTTTAACTGAAAAATCGCAATATCTA TTTACTGCTTCCTTCTTTTAACTGAAAAATCGCAATATCTA < 41bp 1 0.72934631895071 1 0.870159029960632 experiment 0.54130736209858 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063089 chr7:6063097 synonymous SNV . 0 hm6A_associated_SNPs_70129 0 0 1 1 6063083 6063104 mRNA hsa-miR-223 EIF2AK1 miRanda miRanda
14034 chr12 8902630 8902630 1 + C T UCEC 8902634 + 8902614 8902654 41 ACTGCGTTAATAAGTTCTGGACATTTCAAGAGTTGGCTGGC ACTGCGTTAATAAGTTTTGGACATTTCAAGAGTTGGCTGGC < 41bp 1 0.742899631166475 1 0.978379130363464 experiment 0.51420073766705 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8902634 chr12:8902630 synonymous SNV . 0 hm6A_associated_SNPs_70166 0 0 0 1 8902621 8902642 mRNA hsa-miR-203 RIMKLB miRanda miRanda
14034 chr16 58552343 58552343 1 + C T UCEC 58552363 + 58552343 58552383 41 CGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA TGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGA < 41bp 1 0.635052445078109 1 0.827020585536957 experiment 0.729895109843783 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552363 chr16:58552343 nonsynonymous SNV 0.557 4 hm6A_associated_SNPs_70195 0 0 0 1 58552341 58552362 mRNA hsa-miR-153 SETD6 miRanda miRanda
14034 chr13 49841796 49841796 1 + C T UCEC 49841811 + 49841791 49841831 41 TGGTGCAGTTTGTAGAGGAGACCTCTTACAAATGTGACTTT TGGTGTAGTTTGTAGAGGAGACCTCTTACAAATGTGACTTT < 41bp 1 0.397158728923659 1 0.962882399559021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 CDADC1 ENSG00000102543 CDS Human protein_coding chr13:49841811 chr13:49841796 stopgain 0.999 1 hm6A_associated_SNPs_70197 0 0 1 3 49841777 49841798 mRNA hsa-miR-29a CDADC1 miRanda miRanda
14034 chr13 49841796 49841796 1 + C T UCEC 49841811 + 49841791 49841831 41 TGGTGCAGTTTGTAGAGGAGACCTCTTACAAATGTGACTTT TGGTGTAGTTTGTAGAGGAGACCTCTTACAAATGTGACTTT < 41bp 1 0.397158728923659 1 0.962882399559021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 CDADC1 ENSG00000102543 CDS Human protein_coding chr13:49841811 chr13:49841796 stopgain 0.999 1 hm6A_associated_SNPs_70197 0 0 1 3 49841774 49841798 mRNA hsa-miR-29b CDADC1 miRanda miRanda
14034 chr13 49841796 49841796 1 + C T UCEC 49841811 + 49841791 49841831 41 TGGTGCAGTTTGTAGAGGAGACCTCTTACAAATGTGACTTT TGGTGTAGTTTGTAGAGGAGACCTCTTACAAATGTGACTTT < 41bp 1 0.397158728923659 1 0.962882399559021 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 CDADC1 ENSG00000102543 CDS Human protein_coding chr13:49841811 chr13:49841796 stopgain 0.999 1 hm6A_associated_SNPs_70197 0 0 1 3 49841777 49841798 mRNA hsa-miR-29c CDADC1 miRanda miRanda
14034 chr12 88439535 88439535 1 + A G UCEC 88439532 + 88439512 88439552 41 AAACACTGGAACTCATAGGAACAAATATCAATGGAAACCCA AAACACTGGAACTCATAGGAACAGATATCAATGGAAACCCA < 41bp 1 0.41366844680581 1 0.108469635248184 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88439532 chr12:88439535 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_70238 0 0 1 1 88439514 88439536 mRNA hsa-miR-375 C12orf29 miRanda miRanda
14034 chr11 94801519 94801519 1 + C A UCEC 94801530 + 94801510 94801550 41 TTTTTATTTCTATAGTGATGACTGTTTTGGTTTGAAATGAA TTTTTATTTATATAGTGATGACTGTTTTGGTTTGAAATGAA < 41bp 1 0.346772961716524 1 0.98521900177002 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 10 SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94801530 chr11:94801519 . . 0 hm6A_associated_SNPs_70248 0 0 1 2 94801516 94801536 mRNA hsa-miR-212 SFRS2B miRanda miRanda
14034 chr11 94801519 94801519 1 + C A UCEC 94801530 + 94801510 94801550 41 TTTTTATTTCTATAGTGATGACTGTTTTGGTTTGAAATGAA TTTTTATTTATATAGTGATGACTGTTTTGGTTTGAAATGAA < 41bp 1 0.346772961716524 1 0.98521900177002 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 10 SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94801530 chr11:94801519 . . 0 hm6A_associated_SNPs_70248 0 0 1 2 94801516 94801536 mRNA hsa-miR-132 SFRS2B miRanda miRanda
14034 chr19 9453071 9453071 1 + A G UCEC 9453060 + 9453040 9453080 41 GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT GAATTTACTTGTTTCTCAAAACTCAACATTCGCATAAGGGT < 41bp 1 0.476524569549057 1 0.983158349990845 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 32 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453060 chr19:9453071 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_70272 0 0 1 2 9453068 9453090 mRNA hsa-miR-199a-5p ZNF559 miRanda miRanda
14034 chr19 9453071 9453071 1 + A G UCEC 9453060 + 9453040 9453080 41 GAATTTACTTGTTTCTCAAAACTCAACATTCACATAAGGGT GAATTTACTTGTTTCTCAAAACTCAACATTCGCATAAGGGT < 41bp 1 0.476524569549057 1 0.983158349990845 experiment 1 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 32 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453060 chr19:9453071 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_70272 0 0 1 2 9453067 9453090 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr1 151139669 151139669 1 + T C UCEC 151139655 + 151139635 151139675 41 GAAAGAAAGCAGAATCCAAAACATCAGAATGAATTGAGAAG GAAAGAAAGCAGAATCCAAAACATCAGAATGAATCGAGAAG < 41bp 1 0.680708361568264 1 0.85479348897934 experiment 0.638583276863471 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151139655 chr1:151139669 nonsynonymous SNV 0.727 1 hm6A_associated_SNPs_70356 0 0 1 1 151139669 151139690 mRNA hsa-miR-9 SCNM1 miRanda miRanda
14034 chrX 48759707 48759707 1 + G A UCEC 48759702 + 48759682 48759722 41 AGACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAG AGACAGGGAACGGGATCGGGACCGCAGGTATGACAAGGCAG < 41bp 1 0.248808938271601 1 0.989131212234497 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759702 chrX:48759707 nonsynonymous SNV 0.573 3 hm6A_associated_SNPs_70419 0 0 1 1 48759701 48759725 mRNA hsa-miR-346 PQBP1 miRanda miRanda
14034 chrX 48759707 48759707 1 + G A UCEC 48759714 + 48759694 48759734 41 GGATCGGGACCGCGGGTATGACAAGGCAGACCGGGAAGAGG GGATCGGGACCGCAGGTATGACAAGGCAGACCGGGAAGAGG < 41bp 1 0.563790846281063 1 0.965761244297028 experiment 0.872418307437875 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 14 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759714 chrX:48759707 nonsynonymous SNV 0.573 3 hm6A_associated_SNPs_70420 0 0 1 1 48759701 48759725 mRNA hsa-miR-346 PQBP1 miRanda miRanda
14034 chrX 48759707 48759707 1 + G A UCEC 48759723 + 48759703 48759743 41 CCGCGGGTATGACAAGGCAGACCGGGAAGAGGGCAAAGAAC CCGCAGGTATGACAAGGCAGACCGGGAAGAGGGCAAAGAAC < 41bp 1 0.214727180006469 1 0.92931592464447 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759723 chrX:48759707 nonsynonymous SNV 0.573 3 hm6A_associated_SNPs_70421 0 0 1 1 48759701 48759725 mRNA hsa-miR-346 PQBP1 miRanda miRanda
14034 chr19 18278070 18278070 1 + A G UCEC 18278062 + 18278042 18278082 41 AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA AGAGATCGACAAGCGCATGAACAGCCTCGAGCCGGACCTCA < 41bp 1 0.707805424762816 1 0.965610921382904 experiment 0.584389150474367 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 29 PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18278062 chr19:18278070 nonsynonymous SNV 0.986 4 hm6A_associated_SNPs_70429 1 0 1 1 18278049 18278070 mRNA hsa-miR-485-5p PIK3R2 miRanda miRanda
14034 chrX 73046747 73046747 1 - A G UCEC 73046727 - 73046707 73046747 41 TAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA CAGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTA < 41bp 1 0.68998089239384 1 0.95317018032074 experiment 0.620038215212321 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 1 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046727 chrX:73046747 . . 0 hm6A_associated_SNPs_70431 0 0 1 1 73046736 73046756 lncRNA hsa-miR-499a-5p XIST miRanda starBase2
14034 chrX 73046747 73046747 1 - A G UCEC 73046734 - 73046714 73046754 41 CTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGA CTTGAGTCAGAAGTCTTAAGACCTGGGACAGGACACATGGA < 41bp 1 0.277820829979016 1 0.917419016361237 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046734 chrX:73046747 . . 0 hm6A_associated_SNPs_70432 0 0 1 1 73046736 73046756 lncRNA hsa-miR-499a-5p XIST miRanda starBase2
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592612 71592633 mRNA hsa-miR-302a ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592610 71592633 mRNA hsa-miR-302b ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592612 71592633 mRNA hsa-miR-302c ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592609 71592633 mRNA hsa-miR-302d ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592609 71592633 mRNA hsa-miR-373 ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592610 71592633 mRNA hsa-miR-520e ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592611 71592633 mRNA hsa-miR-520a-3p ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592612 71592633 mRNA hsa-miR-520b ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592611 71592633 mRNA hsa-miR-520c-3p ZNF638 miRanda miRanda
14034 chr2 71592619 71592619 1 + A G UCEC 71592606 + 71592586 71592626 41 TACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAG TACAACGATCTGGGCATGGGACAGAATTTAATAGACAGAAG < 41bp 1 0.600163538836953 1 0.87801069021225 experiment 0.799672922326094 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71592606 chr2:71592619 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70450 0 0 1 10 71592611 71592633 mRNA hsa-miR-520d-3p ZNF638 miRanda miRanda
14034 chr19 40873656 40873656 1 + C T UCEC 40873638 + 40873618 40873658 41 AAGCATTCCTGAGGGCCTGGACTTCCCCAATGCCTCCACGG AAGCATTCCTGAGGGCCTGGACTTCCCCAATGCCTCCATGG < 41bp 1 0.493112518903982 1 0.861779034137726 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 39 PLD3 ENSG00000105223 CDS Human protein_coding chr19:40873638 chr19:40873656 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_70500 0 0 1 1 40873654 40873676 mRNA hsa-miR-138 PLD3 miRanda miRanda
14034 chr17 43138816 43138816 1 + G T UCEC 43138810 + 43138790 43138830 41 CGATTGCGAGAATGAGGAGGACAACAGCTACAACCGGGGGT CGATTGCGAGAATGAGGAGGACAACATCTACAACCGGGGGT < 41bp 1 0.618130245637531 1 0.997585237026215 experiment 0.763739508724938 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 NMT1 ENSG00000136448 CDS Human protein_coding chr17:43138810 chr17:43138816 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_70533 0 0 1 1 43138798 43138821 mRNA hsa-miR-142-3p NMT1 miRanda miRanda
14034 chr1 145281389 145281389 1 + G A UCEC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAATGGACCAATGCCTGCCTGTCTCAT < 41bp 1 0.0935636649802122 1 0.1293605864048 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281389 nonsynonymous SNV 0.993 2 hm6A_associated_SNPs_70539 0 0 1 1 145281387 145281409 mRNA hsa-miR-185 NOTCH2NL miRanda miRanda
14034 chr2 71635301 71635301 1 + T G UCEC 71635308 + 71635288 71635328 41 TCAATGTATAGCTTTCTGAAACAAAATCCACAAAATATTGG TCAATGTATAGCTGTCTGAAACAAAATCCACAAAATATTGG < 41bp 1 0.795469842764271 1 0.0389856398105621 experiment 0.409060314471458 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 14 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71635308 chr2:71635301 nonsynonymous SNV 0.982 3 hm6A_associated_SNPs_70627 0 0 1 1 71635295 71635317 mRNA hsa-miR-876-5p ZNF638 miRanda miRanda
14034 chr11 837515 837515 1 + G A UCEC 837500 + 837480 837520 41 CAACTCACAGGACTGGCGAGACAGTGAGTGGATCCGCTCAC CAACTCACAGGACTGGCGAGACAGTGAGTGGATCCACTCAC < 41bp 1 0.468775034782515 1 0.97580748796463 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 CD151 ENSG00000177697 CDS Human protein_coding chr11:837500 chr11:837515 nonsynonymous SNV 0.694 0 hm6A_associated_SNPs_70637 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503695 186503718 mRNA hsa-miR-302a EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503695 186503718 mRNA hsa-miR-302b EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503695 186503718 mRNA hsa-miR-302c EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503695 186503718 mRNA hsa-miR-302d EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503695 186503718 mRNA hsa-miR-373 EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503697 186503718 mRNA hsa-miR-520e EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503696 186503718 mRNA hsa-miR-520a-3p EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503697 186503718 mRNA hsa-miR-520b EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503696 186503718 mRNA hsa-miR-520c-3p EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503696 186503718 mRNA hsa-miR-520d-3p EIF4A2 miRanda miRanda
14034 chr3 186503703 186503703 1 + A G UCEC 186503700 + 186503680 186503720 41 GGTAATTCTGGCACTTGGAGACTATATGGGAGCCACTTGTC GGTAATTCTGGCACTTGGAGACTGTATGGGAGCCACTTGTC < 41bp 1 0.431379117175772 1 0.935696125030518 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503700 chr3:186503703 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_70648 0 0 1 11 186503701 186503718 mRNA hsa-miR-302e EIF4A2 miRanda miRanda
14034 chrX 73041190 73041190 1 - A C UCEC 73041193 - 73041173 73041213 41 ATATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT ATATGCTTCAAAAGAAGAGGACTGTATTGTTCATTGTAGTT < 41bp 1 0.364803485655898 1 0.96795642375946 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041193 chrX:73041190 . . 0 hm6A_associated_SNPs_70660 0 0 1 2 73041186 73041206 lncRNA hsa-miR-142-5p XIST miRanda starBase2
14034 chrX 73041190 73041190 1 - A C UCEC 73041193 - 73041173 73041213 41 ATATGCTTCAAAAGAAGAGGACTTTATTGTTCATTGTAGTT ATATGCTTCAAAAGAAGAGGACTGTATTGTTCATTGTAGTT < 41bp 1 0.364803485655898 1 0.96795642375946 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041193 chrX:73041190 . . 0 hm6A_associated_SNPs_70660 0 0 1 2 73041186 73041206 lncRNA hsa-miR-5590-3p XIST miRanda starBase2
14034 chr3 158408979 158408979 1 + G T UCEC 158408963 + 158408943 158408983 41 ATGTTTGGTTATTCCACTGAACTTAGGTCATGCACAGAGGT ATGTTTGGTTATTCCACTGAACTTAGGTCATGCACATAGGT < 41bp 1 0.395775533201608 1 0.505957901477814 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158408963 chr3:158408979 stopgain 0.999 1 hm6A_associated_SNPs_70666 0 0 1 2 158408972 158408981 mRNA hsa-miR-204 GFM1 miRanda miRanda
14034 chr3 158408979 158408979 1 + G T UCEC 158408963 + 158408943 158408983 41 ATGTTTGGTTATTCCACTGAACTTAGGTCATGCACAGAGGT ATGTTTGGTTATTCCACTGAACTTAGGTCATGCACATAGGT < 41bp 1 0.395775533201608 1 0.505957901477814 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158408963 chr3:158408979 stopgain 0.999 1 hm6A_associated_SNPs_70666 0 0 1 2 158408971 158408981 mRNA hsa-miR-211 GFM1 miRanda miRanda
14034 chr7 11209084 11209084 1 + G A UCEC 11209096 + 11209076 11209116 41 TCTCAGGAGCTCAACATGGAACAGAAAAATCCAAAGAAATA TCTCAGGAACTCAACATGGAACAGAAAAATCCAAAGAAATA < 41bp 1 0.353977614738597 1 0.963536024093628 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 PHF14;THSD7A ENSG00000106443 CDS Human protein_coding chr7:11209096 chr7:11209084 synonymous SNV . 0 hm6A_associated_SNPs_70683 0 0 1 1 11209064 11209084 mRNA hsa-miR-125b PHF14 miRanda miRanda
14034 chr3 186503763 186503763 1 + A C UCEC 186503764 + 186503744 186503784 41 GTTCGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA GTTCGAAATGAAATGCAAACACTGCAGGCTGAAGCACCACA Direct Loss 1 0.396190443302739 1 0.898670732975006 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 20 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503764 chr3:186503763 nonsynonymous SNV 0.966 0 hm6A_associated_SNPs_70701 0 0 1 1 186503745 186503765 mRNA hsa-miR-129-5p EIF4A2 miRanda miRanda
14034 chr10 17277845 17277845 1 + G A UCEC 17277865 + 17277845 17277885 41 GATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTGAACCTGA AATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTGAACCTGA < 41bp 1 0.51041714289698 1 0.112876623868942 experiment 0.979165714206041 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 1 VIM ENSG00000026025 CDS Human protein_coding chr10:17277865 chr10:17277845 synonymous SNV . 0 hm6A_associated_SNPs_70763 0 0 1 1 17277845 17277853 mRNA hsa-miR-539 VIM miRanda miRanda
14034 chr16 72046056 72046056 1 + G A UCEC 72046044 + 72046024 72046064 41 GATGAGCGTTTCTATGCTGAACACCTGATGCCGACTCTGCA GATGAGCGTTTCTATGCTGAACACCTGATGCCAACTCTGCA < 41bp 1 0.590018583816092 1 0.827661752700806 experiment 0.819962832367816 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 DHODH ENSG00000102967 CDS Human protein_coding chr16:72046044 chr16:72046056 synonymous SNV . 0 hm6A_associated_SNPs_70870 0 0 1 1 72046029 72046056 mRNA hsa-miR-24 DHODH miRanda miRanda
14034 chr14 24113644 24113644 1 + G A UCEC 24113645 + 24113625 24113665 41 GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCACT GTGTCTACAATGTCAGCAAAACAGCGCTGCTGGGTCTCACT < 41bp 1 0.340819081043719 1 0.00300523638725281 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 20 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113645 chr14:24113644 synonymous SNV . 0 hm6A_associated_SNPs_70880 0 0 1 2 24113625 24113651 mRNA hsa-miR-187 DHRS2 miRanda miRanda
14034 chr14 24113644 24113644 1 + G A UCEC 24113645 + 24113625 24113665 41 GTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCTCACT GTGTCTACAATGTCAGCAAAACAGCGCTGCTGGGTCTCACT < 41bp 1 0.340819081043719 1 0.00300523638725281 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 20 DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113645 chr14:24113644 synonymous SNV . 0 hm6A_associated_SNPs_70880 0 0 1 2 24113627 24113647 mRNA hsa-miR-431 DHRS2 miRanda miRanda
14034 chr6 96996090 96996090 1 + T G UCEC 96996101 + 96996081 96996121 41 ATTGAAGATTTTTTAAGAAAACACATACAAGATGCCCCTGA ATTGAAGATGTTTTAAGAAAACACATACAAGATGCCCCTGA < 41bp 1 0.726715319508294 1 0.0849118530750275 experiment 0.546569360983412 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 UFL1 ENSG00000014123 CDS Human protein_coding chr6:96996101 chr6:96996090 nonsynonymous SNV 0.984 0 hm6A_associated_SNPs_70966 0 0 1 1 96996086 96996109 mRNA hsa-miR-142-3p KIAA0776 miRanda miRanda
14034 chr10 62551736 62551736 1 + T C UCEC 62551746 + 62551726 62551766 41 ATAGGCACCATATTTGCTGAACTAGCAACTAAGAAACCACT ATAGGCACCACATTTGCTGAACTAGCAACTAAGAAACCACT < 41bp 1 0.557118009002284 1 0.615473628044128 experiment 0.885763981995432 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 11 CDK1 ENSG00000170312 CDS Human protein_coding chr10:62551746 chr10:62551736 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_70974 0 0 1 1 62551715 62551737 mRNA hsa-miR-455-5p CDK1 miRanda miRanda
14034 chr5 162945236 162945236 1 + G T UCEC 162945251 + 162945231 162945271 41 TCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT TCCGATAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCT < 41bp 1 0.724409278917274 1 0.941374182701111 experiment 0.551181442165451 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945251 chr5:162945236 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_70996 0 0 1 1 162945235 162945257 mRNA hsa-miR-497 MAT2B miRanda miRanda
14034 chr17 2228029 2228029 1 + T G UCEC 2228041 + 2228021 2228061 41 GTAAAAATTTTGAAAGGATGACCACTCAGAACAACTCTCTT GTAAAAATGTTGAAAGGATGACCACTCAGAACAACTCTCTT < 41bp 1 0.542902983595901 1 0.828643798828125 experiment 0.914194032808199 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 9 TSR1 ENSG00000167721 CDS Human protein_coding chr17:2228041 chr17:2228029 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_71057 0 0 1 1 2228028 2228047 mRNA hsa-miR-140-5p SRR miRanda miRanda
14034 chr11 76917233 76917233 1 + G T UCEC 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTTATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.217511682750514 1 0.741296648979187 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917233 nonsynonymous SNV 0.658 4 hm6A_associated_SNPs_71058 0 0 0 3 76917223 76917245 mRNA hsa-miR-223 MYO7A miRanda miRanda
14034 chr11 76917233 76917233 1 + G T UCEC 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTTATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.217511682750514 1 0.741296648979187 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917233 nonsynonymous SNV 0.658 4 hm6A_associated_SNPs_71058 0 0 0 3 76917222 76917243 mRNA hsa-miR-152 MYO7A miRanda miRanda
14034 chr11 76917233 76917233 1 + G T UCEC 76917237 + 76917217 76917257 41 CAAAGTCTACTTCCCTGATGACACTGACGAGGTGAGGGTCA CAAAGTCTACTTCCCTTATGACACTGACGAGGTGAGGGTCA < 41bp 1 0.217511682750514 1 0.741296648979187 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 MYO7A ENSG00000137474 CDS Human protein_coding chr11:76917237 chr11:76917233 nonsynonymous SNV 0.658 4 hm6A_associated_SNPs_71058 0 0 0 3 76917221 76917243 mRNA hsa-miR-148b MYO7A miRanda miRanda
14034 chr2 204244967 204244967 1 + G T UCEC 204244982 + 204244962 204245002 41 GAAGAGAAATTGGTATTTTGACTACCAATAAAAACACTTCA GAAGATAAATTGGTATTTTGACTACCAATAAAAACACTTCA < 41bp 1 0.339244032742826 1 0.937435865402222 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 ABI2 ENSG00000138443 CDS Human protein_coding chr2:204244982 chr2:204244967 stopgain 1.000 1 hm6A_associated_SNPs_71069 0 0 1 1 204244967 204244989 mRNA hsa-miR-196a ABI2 miRanda miRanda
14034 chrX 54559005 54559005 1 + G T UCEC 54559014 + 54558994 54559034 41 GTCATCATGATGAAACTTAGACACAGTGAGTTTCCTTTACC GTCATCATGATTAAACTTAGACACAGTGAGTTTCCTTTACC < 41bp 1 0.354148678926847 1 0.00211584568023682 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 GNL3L ENSG00000130119 CDS Human protein_coding chrX:54559014 chrX:54559005 nonsynonymous SNV 0.942 1 hm6A_associated_SNPs_71074 0 0 1 2 54558999 54559018 mRNA hsa-miR-187 GNL3L miRanda miRanda
14034 chrX 54559005 54559005 1 + G T UCEC 54559014 + 54558994 54559034 41 GTCATCATGATGAAACTTAGACACAGTGAGTTTCCTTTACC GTCATCATGATTAAACTTAGACACAGTGAGTTTCCTTTACC < 41bp 1 0.354148678926847 1 0.00211584568023682 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 GNL3L ENSG00000130119 CDS Human protein_coding chrX:54559014 chrX:54559005 nonsynonymous SNV 0.942 1 hm6A_associated_SNPs_71074 0 0 1 2 54558998 54559018 mRNA hsa-miR-599 GNL3L miRanda miRanda
14034 chr11 111431011 111431011 1 + A G UCEC 111431023 + 111431003 111431043 41 TCCCGATGACATGTCTTGTGACTATGACAACATGGCTGTGA TCCCGATGGCATGTCTTGTGACTATGACAACATGGCTGTGA < 41bp 1 0.79813948243432 1 0.911030769348145 experiment 0.403721035131361 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 LAYN ENSG00000204381 CDS Human protein_coding chr11:111431023 chr11:111431011 nonsynonymous SNV 0.077 0 hm6A_associated_SNPs_71090 0 0 1 1 111431009 111431032 mRNA hsa-miR-153 LAYN miRanda miRanda
14034 chr6 151293131 151293131 1 + G A UCEC 151293120 + 151293100 151293140 41 GCATGCGGGCCCTTTTGCTAACATTGCTCACGGCAACTCTT GCATGCGGGCCCTTTTGCTAACATTGCTCACAGCAACTCTT < 41bp 1 0.514134094175689 1 0.170371830463409 experiment 0.971731811648622 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151293120 chr6:151293131 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_71163 0 0 1 2 151293127 151293148 mRNA hsa-miR-141 MTHFD1L miRanda miRanda
14034 chr6 151293131 151293131 1 + G A UCEC 151293120 + 151293100 151293140 41 GCATGCGGGCCCTTTTGCTAACATTGCTCACGGCAACTCTT GCATGCGGGCCCTTTTGCTAACATTGCTCACAGCAACTCTT < 41bp 1 0.514134094175689 1 0.170371830463409 experiment 0.971731811648622 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151293120 chr6:151293131 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_71163 0 0 1 2 151293127 151293148 mRNA hsa-miR-200a MTHFD1L miRanda miRanda
14034 chr7 104747884 104747884 1 + G T UCEC 104747866 + 104747846 104747886 41 CTTTTAGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAA CTTTTAGAAATTCTAATTTAACTGAACTGGGTCTGCAATAA < 41bp 1 0.690587020475303 1 0.955597400665283 experiment 0.618825959049395 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747866 chr7:104747884 stopgain 1.000 0 hm6A_associated_SNPs_71173 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chr7 104747884 104747884 1 + G T UCEC 104747871 + 104747851 104747891 41 AGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAAATAAA AGAAATTCTAATTTAACTGAACTGGGTCTGCAATAAATAAA < 41bp 1 0.761908144898297 1 0.987206101417542 experiment 0.476183710203407 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 34 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747871 chr7:104747884 stopgain 1.000 0 hm6A_associated_SNPs_71174 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chr6 126359982 126359982 1 + A G UCEC 126359997 + 126359977 126360017 41 GAATGAAAATTAAGATTTTGACAATGAAGAAAGAATAAGAA GAATGGAAATTAAGATTTTGACAATGAAGAAAGAATAAGAA < 41bp 1 0.790202926932922 1 0.960877299308777 experiment 0.419594146134155 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 6 TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126359997 chr6:126359982 stoploss 0.981 0 hm6A_associated_SNPs_71189 0 0 1 1 126359982 126360003 mRNA hsa-miR-219-5p TRMT11 miRanda miRanda
14034 chr11 36680696 36680696 1 + G T UCEC 36680714 + 36680694 36680734 41 GAGAAAGGACACCAGCCCAGACTTAGAGAAATCCTGTGACT GATAAAGGACACCAGCCCAGACTTAGAGAAATCCTGTGACT < 41bp 1 0.286395850745286 1 0.748107194900513 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36680714 chr11:36680696 nonsynonymous SNV 0.343 2 hm6A_associated_SNPs_71196 0 0 1 1 36680688 36680710 mRNA hsa-miR-138 C11orf74 miRanda miRanda
14034 chr1 100614347 100614347 1 + C A UCEC 100614332 + 100614312 100614352 41 CTTTGGAAAATGTTTTGTTAACTGCTTTACCAAATCATTCT CTTTGGAAAATGTTTTGTTAACTGCTTTACCAAATAATTCT < 41bp 1 0.525063761125069 1 0.809707164764404 experiment 0.949872477749863 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 36 TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100614332 chr1:100614347 nonsynonymous SNV 0.316 0 hm6A_associated_SNPs_71203 0 0 1 1 100614341 100614364 mRNA hsa-miR-138 CCDC76 miRanda miRanda
14034 chr1 100614347 100614347 1 + C A UCEC 100614365 + 100614345 100614385 41 ATCATTCTTCATCACCAGAAACAACTGCTTAATGGAAAAGA ATAATTCTTCATCACCAGAAACAACTGCTTAATGGAAAAGA < 41bp 1 0.771297292968686 1 0.850741147994995 experiment 0.457405414062628 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100614365 chr1:100614347 nonsynonymous SNV 0.316 0 hm6A_associated_SNPs_71204 0 0 1 1 100614341 100614364 mRNA hsa-miR-138 CCDC76 miRanda miRanda
14034 chr3 158402433 158402433 1 + G A UCEC 158402453 + 158402433 158402473 41 GCAGGAGAAGGTGCTCTTAAACAAGGTATGCTGGGTCCGGG ACAGGAGAAGGTGCTCTTAAACAAGGTATGCTGGGTCCGGG < 41bp 1 0.582174123069128 1 0.223202854394913 experiment 0.835651753861744 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158402453 chr3:158402433 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_71235 0 0 1 1 158402428 158402451 mRNA hsa-miR-506 GFM1 miRanda miRanda
14034 chr7 86813748 86813748 1 + G T UCEC 86813766 + 86813746 86813786 41 CAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGAC CATAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGAC < 41bp 1 0.759274802113321 1 0.80074816942215 experiment 0.481450395773357 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 3 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86813766 chr7:86813748 stopgain 0.999 1 hm6A_associated_SNPs_71278 0 0 1 1 86813730 86813751 mRNA hsa-miR-544 DMTF1 miRanda miRanda
14034 chr6 88321960 88321960 1 + C T UCEC 88321949 + 88321929 88321969 41 TGTCTTGTAAGGAGCACCTGACTACGGTACTCGATAAGGTA TGTCTTGTAAGGAGCACCTGACTACGGTACTTGATAAGGTA < 41bp 1 0.259321540326215 1 0.28659063577652 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88321949 chr6:88321960 synonymous SNV . 0 hm6A_associated_SNPs_71302 0 0 0 2 88321946 88321966 mRNA hsa-miR-21 ORC3L miRanda miRanda
14034 chr6 88321960 88321960 1 + C T UCEC 88321949 + 88321929 88321969 41 TGTCTTGTAAGGAGCACCTGACTACGGTACTCGATAAGGTA TGTCTTGTAAGGAGCACCTGACTACGGTACTTGATAAGGTA < 41bp 1 0.259321540326215 1 0.28659063577652 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88321949 chr6:88321960 synonymous SNV . 0 hm6A_associated_SNPs_71302 0 0 0 2 88321948 88321966 mRNA hsa-miR-590-5p ORC3L miRanda miRanda
14034 chr3 12458536 12458536 1 + C T UCEC 12458552 + 12458532 12458572 41 CCTGCGAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG CCTGTGAAAGCCTTTTGGTGACTTTATGGAGCCCAAGTTTG < 41bp 1 0.53817769727118 1 0.757916331291199 experiment 0.923644605457641 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 5 PPARG ENSG00000132170 CDS Human protein_coding chr3:12458552 chr3:12458536 stopgain 0.990 1 hm6A_associated_SNPs_71305 0 0 1 1 12458534 12458556 mRNA hsa-miR-224 PPARG miRanda miRanda
14034 chr10 115668192 115668192 1 + G A UCEC 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGACAACAGTGCTTGTATGATGA < 41bp 1 0.750263915645175 1 0.111288070678711 experiment 0.499472168709649 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668192 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_71310 0 0 1 3 115668192 115668213 mRNA hsa-miR-205 NHLRC2 miRanda miRanda
14034 chr10 115668192 115668192 1 + G A UCEC 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGACAACAGTGCTTGTATGATGA < 41bp 1 0.750263915645175 1 0.111288070678711 experiment 0.499472168709649 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668192 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_71310 0 0 1 3 115668185 115668205 mRNA hsa-miR-381 NHLRC2 miRanda miRanda
14034 chr10 115668192 115668192 1 + G A UCEC 115668189 + 115668169 115668209 41 TCTTTATTACTGTAGTGCAGACAGCAGTGCTTGTATGATGA TCTTTATTACTGTAGTGCAGACAACAGTGCTTGTATGATGA < 41bp 1 0.750263915645175 1 0.111288070678711 experiment 0.499472168709649 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668189 chr10:115668192 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_71310 0 0 1 3 115668185 115668205 mRNA hsa-miR-300 NHLRC2 miRanda miRanda
14034 chr2 71190009 71190009 1 + C T UCEC 71189999 + 71189979 71190019 41 TGTGCTGGTCATACTGACGGACATGAGTTCCTATGCAGAGG TGTGCTGGTCATACTGACGGACATGAGTTCTTATGCAGAGG < 41bp 1 0.482308563092343 1 0.79092937707901 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 31 ATP6V1B1 ENSG00000116039 CDS Human protein_coding chr2:71189999 chr2:71190009 synonymous SNV . 0 hm6A_associated_SNPs_71341 0 0 0 1 71189995 71190016 mRNA hsa-miR-153 ATP6V1B1 miRanda miRanda
14034 chr3 160120571 160120571 1 + C A UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTATCAGTATTAATACATAA < 41bp 1 0.387929182096044 1 0.936111330986023 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 24 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120571 synonymous SNV . 0 hm6A_associated_SNPs_71345 0 0 1 3 160120559 160120580 mRNA hsa-miR-200b SMC4 miRanda miRanda
14034 chr3 160120571 160120571 1 + C A UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTATCAGTATTAATACATAA < 41bp 1 0.387929182096044 1 0.936111330986023 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 24 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120571 synonymous SNV . 0 hm6A_associated_SNPs_71345 0 0 1 3 160120559 160120580 mRNA hsa-miR-200c SMC4 miRanda miRanda
14034 chr3 160120571 160120571 1 + C A UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTATCAGTATTAATACATAA < 41bp 1 0.387929182096044 1 0.936111330986023 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 24 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120571 synonymous SNV . 0 hm6A_associated_SNPs_71345 0 0 1 3 160120559 160120580 mRNA hsa-miR-429 SMC4 miRanda miRanda
14034 chr17 53007499 53007499 1 + C T UCEC 53007509 + 53007489 53007529 41 TGGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTG TGGTGGAGAATGAAGATGTAACTGTTGAGCTAATTCAGGTG < 41bp 1 0.511009540866028 1 0.440106332302094 experiment 0.977980918267944 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53007509 chr17:53007499 synonymous SNV . 0 hm6A_associated_SNPs_71351 0 0 1 2 53007498 53007518 mRNA hsa-miR-505 TOM1L1 miRanda miRanda
14034 chr17 53007499 53007499 1 + C T UCEC 53007509 + 53007489 53007529 41 TGGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTG TGGTGGAGAATGAAGATGTAACTGTTGAGCTAATTCAGGTG < 41bp 1 0.511009540866028 1 0.440106332302094 experiment 0.977980918267944 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53007509 chr17:53007499 synonymous SNV . 0 hm6A_associated_SNPs_71351 0 0 1 2 53007493 53007517 mRNA hsa-miR-421 TOM1L1 miRanda miRanda
14034 chr16 58552053 58552053 1 + C T UCEC 58552065 + 58552045 58552085 41 CATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGA CATATGTATGGTTTTGTTGAACCATATCCTGACAACACAGA < 41bp 1 0.698282033907246 1 0.690639793872833 experiment 0.603435932185508 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 9 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552065 chr16:58552053 synonymous SNV . 0 hm6A_associated_SNPs_71353 0 0 1 2 58552051 58552073 mRNA hsa-miR-190 SETD6 miRanda miRanda
14034 chr16 58552053 58552053 1 + C T UCEC 58552065 + 58552045 58552085 41 CATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGA CATATGTATGGTTTTGTTGAACCATATCCTGACAACACAGA < 41bp 1 0.698282033907246 1 0.690639793872833 experiment 0.603435932185508 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 9 SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552065 chr16:58552053 synonymous SNV . 0 hm6A_associated_SNPs_71353 0 0 1 2 58552052 58552073 mRNA hsa-miR-190b SETD6 miRanda miRanda
14034 chr3 54603878 54603878 1 + A C UCEC 54603873 + 54603853 54603893 41 CATTGCCTTCGACTGCAGGAACCGAAAATGGTAGGCAGTGG CATTGCCTTCGACTGCAGGAACCGACAATGGTAGGCAGTGG < 41bp 1 0.0233381126130716 1 0.655122041702271 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 CACNA2D3 ENSG00000157445 CDS Human protein_coding chr3:54603873 chr3:54603878 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_71381 0 0 0 2 54603877 54603882 mRNA hsa-miR-302b CACNA2D3 miRanda miRanda
14034 chr3 54603878 54603878 1 + A C UCEC 54603873 + 54603853 54603893 41 CATTGCCTTCGACTGCAGGAACCGAAAATGGTAGGCAGTGG CATTGCCTTCGACTGCAGGAACCGACAATGGTAGGCAGTGG < 41bp 1 0.0233381126130716 1 0.655122041702271 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 26 CACNA2D3 ENSG00000157445 CDS Human protein_coding chr3:54603873 chr3:54603878 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_71381 0 0 0 2 54603877 54603882 mRNA hsa-miR-302c CACNA2D3 miRanda miRanda
14034 chr4 115544334 115544334 1 + G A UCEC 115544342 + 115544322 115544362 41 GGGAGATTGACAGCAATCGAACTGTTTGACATACTGGATCA GGGAGATTGACAACAATCGAACTGTTTGACATACTGGATCA < 41bp 1 0.667132261918158 1 0.999097228050232 experiment 0.665735476163684 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544342 chr4:115544334 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_71408 0 0 1 1 115544318 115544338 mRNA hsa-miR-599 UGT8 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218337 160218359 mRNA hsa-miR-302a MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218333 160218359 mRNA hsa-miR-302b MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218335 160218359 mRNA hsa-miR-302c MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218333 160218359 mRNA hsa-miR-302d MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218337 160218359 mRNA hsa-miR-372 MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218337 160218359 mRNA hsa-miR-373 MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218340 160218359 mRNA hsa-miR-520e MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218338 160218359 mRNA hsa-miR-520a-3p MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218339 160218359 mRNA hsa-miR-520b MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218338 160218359 mRNA hsa-miR-520c-3p MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218338 160218359 mRNA hsa-miR-520d-3p MRPL18 miRanda miRanda
14034 chr6 160218344 160218344 1 + C A UCEC 160218335 + 160218315 160218355 41 TTAGGTTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCA TTAGGTTGCGAGTTATAAGGACTCAGCATAATGTAGAAGCA < 41bp 1 0.555898913168287 1 0.68171751499176 experiment 0.888202173663427 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 30 MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218335 chr6:160218344 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_71430 0 0 1 12 160218341 160218359 mRNA hsa-miR-302e MRPL18 miRanda miRanda
14034 chr4 44687978 44687978 1 + T A UCEC 44687994 + 44687974 44688014 41 AGATTTCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT AGATATCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT < 41bp 1 0.712717111286762 1 0.0120108723640442 experiment 0.574565777426477 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44687994 chr4:44687978 synonymous SNV . 0 hm6A_associated_SNPs_71434 0 0 1 2 44687977 44687998 mRNA hsa-miR-375 GUF1 miRanda miRanda
14034 chr4 44687978 44687978 1 + T A UCEC 44687994 + 44687974 44688014 41 AGATTTCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT AGATATCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT < 41bp 1 0.712717111286762 1 0.0120108723640442 experiment 0.574565777426477 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44687994 chr4:44687978 synonymous SNV . 0 hm6A_associated_SNPs_71434 0 0 1 2 44687976 44687983 mRNA hsa-miR-539 GUF1 miRanda miRanda
14034 chr17 1943561 1943561 1 + C T UCEC 1943545 + 1943525 1943565 41 AGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCAT AGCAAAGTCCTATCCAGAGAACACTATGACCACCAGTGCAT < 41bp 1 0.784166425740107 1 0.548005044460297 experiment 0.431667148519786 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943545 chr17:1943561 nonsynonymous SNV 0.873 1 hm6A_associated_SNPs_71467 0 0 1 1 1943539 1943562 mRNA hsa-miR-138 DPH1 miRanda miRanda
14034 chr3 139069125 139069125 1 + A G UCEC 139069132 + 139069112 139069152 41 AAGAAGGTCGTAAAATTTTGACACCAATAATTTTCAAGGAA AAGAAGGTCGTAAGATTTTGACACCAATAATTTTCAAGGAA < 41bp 1 0.775046737799739 1 0.400135606527328 experiment 0.449906524400522 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139069132 chr3:139069125 synonymous SNV . 0 hm6A_associated_SNPs_71508 0 0 1 2 139069109 139069129 mRNA hsa-miR-590-3p MRPS22 miRanda miRanda
14034 chr3 139069125 139069125 1 + A G UCEC 139069132 + 139069112 139069152 41 AAGAAGGTCGTAAAATTTTGACACCAATAATTTTCAAGGAA AAGAAGGTCGTAAGATTTTGACACCAATAATTTTCAAGGAA < 41bp 1 0.775046737799739 1 0.400135606527328 experiment 0.449906524400522 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139069132 chr3:139069125 synonymous SNV . 0 hm6A_associated_SNPs_71508 0 0 1 2 139069116 139069138 mRNA hsa-miR-599 MRPS22 miRanda miRanda
14034 chr20 57485110 57485110 1 + T G UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATGTGCTC < 41bp 1 0.35036068935957 1 0.998316526412964 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485110 nonsynonymous SNV 0.991 5 hm6A_associated_SNPs_71510 0 0 1 4 57485097 57485119 mRNA hsa-miR-15a GNAS miRanda miRanda
14034 chr20 57485110 57485110 1 + T G UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATGTGCTC < 41bp 1 0.35036068935957 1 0.998316526412964 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485110 nonsynonymous SNV 0.991 5 hm6A_associated_SNPs_71510 0 0 1 4 57485097 57485119 mRNA hsa-miR-15b GNAS miRanda miRanda
14034 chr20 57485110 57485110 1 + T G UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATGTGCTC < 41bp 1 0.35036068935957 1 0.998316526412964 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485110 nonsynonymous SNV 0.991 5 hm6A_associated_SNPs_71510 0 0 1 4 57485104 57485126 mRNA hsa-miR-142-3p GNAS miRanda miRanda
14034 chr20 57485110 57485110 1 + T G UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATGTGCTC < 41bp 1 0.35036068935957 1 0.998316526412964 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485110 nonsynonymous SNV 0.991 5 hm6A_associated_SNPs_71510 0 0 1 4 57485098 57485119 mRNA hsa-miR-497 GNAS miRanda miRanda
14034 chr8 68005803 68005803 1 + A C UCEC 68005800 + 68005780 68005820 41 AAGGTTGAAACTTGAACGTAACAAAGAATACAATCAGTTTC AAGGTTGAAACTTGAACGTAACACAGAATACAATCAGTTTC < 41bp 1 0.317624970960356 1 0.139877378940582 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68005800 chr8:68005803 nonsynonymous SNV 0.986 2 hm6A_associated_SNPs_71557 0 0 1 1 68005782 68005804 mRNA hsa-miR-375 CSPP1 miRanda miRanda
14034 chr7 86815191 86815191 1 + C A UCEC 86815177 + 86815157 86815197 41 TGATGTAGCTGATGAAAATGACATTAACTGGGATCTGTTAG TGATGTAGCTGATGAAAATGACATTAACTGGGATATGTTAG < 41bp 1 0.757137287795767 1 0.635112047195435 experiment 0.485725424408466 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 35 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86815177 chr7:86815191 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_71574 0 0 1 1 86815176 86815196 mRNA hsa-miR-212 DMTF1 miRanda miRanda
14034 chr9 127996191 127996191 1 + T G UCEC 127996173 + 127996153 127996193 41 ACTCACATGAGGAAAGCCAGACTGCTACACTGCTCTGTTTG ACTCACATGAGGAAAGCCAGACTGCTACACTGCTCTGTGTG < 41bp 1 0.633062452884883 1 0.966941356658936 experiment 0.733875094230235 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996173 chr9:127996191 nonsynonymous SNV 0.986 1 hm6A_associated_SNPs_71585 0 0 1 1 127996188 127996210 mRNA hsa-miR-324-5p RABEPK miRanda miRanda
14034 chr6 52530092 52530092 1 + G T UCEC 52530094 + 52530074 52530114 41 CTGGGATACCAGCAAAAAGGACCCAAAAGACTGTTTCACCA CTGGGATACCAGCAAAAATGACCCAAAAGACTGTTTCACCA < 41bp 1 0.154365729282528 1 0.938400626182556 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 19 LOC730101 ENSG00000216775 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:52530094 chr6:52530092 . . 0 hm6A_associated_SNPs_71604 0 0 0 2 52530089 52530109 mRNA hsa-miR-212 LOC730101 miRanda miRanda
14034 chr6 52530092 52530092 1 + G T UCEC 52530094 + 52530074 52530114 41 CTGGGATACCAGCAAAAAGGACCCAAAAGACTGTTTCACCA CTGGGATACCAGCAAAAATGACCCAAAAGACTGTTTCACCA < 41bp 1 0.154365729282528 1 0.938400626182556 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 19 LOC730101 ENSG00000216775 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:52530094 chr6:52530092 . . 0 hm6A_associated_SNPs_71604 0 0 0 2 52530088 52530109 mRNA hsa-miR-132 LOC730101 miRanda miRanda
14034 chr5 76331521 76331521 1 + G T UCEC 76331518 + 76331498 76331538 41 CTTACCCTGGTACCGATAGAACAGAAAATGTTAAATATAGA CTTACCCTGGTACCGATAGAACATAAAATGTTAAATATAGA < 41bp 1 0.686014590158757 1 0.958093583583832 experiment 0.627970819682486 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 24 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331518 chr5:76331521 stopgain 0.249 0 hm6A_associated_SNPs_71614 0 0 1 1 76331509 76331530 mRNA hsa-miR-543 AGGF1 miRanda miRanda
14034 chr5 76331521 76331521 1 + G T UCEC 76331538 + 76331518 76331558 41 ACAGAAAATGTTAAATATAGACAAGTGGACCATTTTGCCTC ACATAAAATGTTAAATATAGACAAGTGGACCATTTTGCCTC < 41bp 1 0.683742650959526 1 0.973503112792969 experiment 0.632514698080948 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 4 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331538 chr5:76331521 stopgain 0.249 0 hm6A_associated_SNPs_71615 0 0 1 1 76331509 76331530 mRNA hsa-miR-543 AGGF1 miRanda miRanda
14034 chr2 234363496 234363496 1 + C T UCEC 234363480 + 234363460 234363500 41 GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGATG GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGTGATG < 41bp 1 0.286707550818239 1 0.989728331565857 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363480 chr2:234363496 synonymous SNV . 0 hm6A_associated_SNPs_71639 0 0 1 2 234363491 234363512 mRNA hsa-miR-330-5p DGKD miRanda miRanda
14034 chr2 234363496 234363496 1 + C T UCEC 234363480 + 234363460 234363500 41 GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGATG GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGTGATG < 41bp 1 0.286707550818239 1 0.989728331565857 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363480 chr2:234363496 synonymous SNV . 0 hm6A_associated_SNPs_71639 0 0 1 2 234363494 234363512 mRNA hsa-miR-326 DGKD miRanda miRanda
14034 chr2 234363496 234363496 1 + C T UCEC 234363486 + 234363466 234363506 41 GAAGATATCCCTGGACTTTAACAACAAGCGCGATGAGCACC GAAGATATCCCTGGACTTTAACAACAAGCGTGATGAGCACC < 41bp 1 0.510303133769677 1 0.924274206161499 experiment 0.979393732460645 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363486 chr2:234363496 synonymous SNV . 0 hm6A_associated_SNPs_71640 0 0 1 2 234363491 234363512 mRNA hsa-miR-330-5p DGKD miRanda miRanda
14034 chr2 234363496 234363496 1 + C T UCEC 234363486 + 234363466 234363506 41 GAAGATATCCCTGGACTTTAACAACAAGCGCGATGAGCACC GAAGATATCCCTGGACTTTAACAACAAGCGTGATGAGCACC < 41bp 1 0.510303133769677 1 0.924274206161499 experiment 0.979393732460645 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 31 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363486 chr2:234363496 synonymous SNV . 0 hm6A_associated_SNPs_71640 0 0 1 2 234363494 234363512 mRNA hsa-miR-326 DGKD miRanda miRanda
14034 chr2 113260548 113260548 1 + G A UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCAGACTGCTTCAGAACCATATCAT < 41bp 1 0.209726345101813 1 0.741737961769104 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 19 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260548 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_71650 0 0 1 1 113260548 113260569 mRNA hsa-miR-190 TTL miRanda miRanda
14034 chr9 731227 731227 1 + G A UCEC 731212 + 731192 731232 41 CATGAAGAAGAAAGATGGTAACAAAGATTCAAATGGCGCAA CATGAAGAAGAAAGATGGTAACAAAGATTCAAATGACGCAA < 41bp 1 0.69913127819274 1 0.920650005340576 experiment 0.601737443614521 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 36 KANK1 ENSG00000107104 CDS Human protein_coding chr9:731212 chr9:731227 nonsynonymous SNV 0.215 1 hm6A_associated_SNPs_71695 0 0 0 1 731213 731236 mRNA hsa-miR-129-5p KANK1 miRanda miRanda
14034 chr2 238680759 238680759 1 + G A UCEC 238680776 + 238680756 238680796 41 ACAGAAGATTGGCAAACTAGACAATCTTCGATCTGAAGATG ACAAAAGATTGGCAAACTAGACAATCTTCGATCTGAAGATG < 41bp 1 0.682800291657886 1 0.931345462799072 experiment 0.634399416684227 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 4 LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238680776 chr2:238680759 synonymous SNV . 0 hm6A_associated_SNPs_71748 0 0 1 1 238680756 238680778 mRNA hsa-miR-223 LRRFIP1 miRanda miRanda
14034 chr1 227842132 227842132 1 + C A UCEC 227842116 + 227842096 227842136 41 CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGA CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCATTGA < 41bp 1 0.746773920309126 1 0.985480785369873 experiment 0.506452159381748 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842116 chr1:227842132 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_71787 0 0 1 7 227842127 227842147 mRNA hsa-miR-19a ZNF678 miRanda miRanda
14034 chr1 227842132 227842132 1 + C A UCEC 227842116 + 227842096 227842136 41 CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGA CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCATTGA < 41bp 1 0.746773920309126 1 0.985480785369873 experiment 0.506452159381748 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842116 chr1:227842132 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_71787 0 0 1 7 227842125 227842147 mRNA hsa-miR-19b ZNF678 miRanda miRanda
14034 chr1 227842132 227842132 1 + C A UCEC 227842116 + 227842096 227842136 41 CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGA CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCATTGA < 41bp 1 0.746773920309126 1 0.985480785369873 experiment 0.506452159381748 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842116 chr1:227842132 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_71787 0 0 1 7 227842128 227842148 mRNA hsa-miR-130a ZNF678 miRanda miRanda
14034 chr1 227842132 227842132 1 + C A UCEC 227842116 + 227842096 227842136 41 CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGA CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCATTGA < 41bp 1 0.746773920309126 1 0.985480785369873 experiment 0.506452159381748 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842116 chr1:227842132 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_71787 0 0 1 7 227842130 227842148 mRNA hsa-miR-301a ZNF678 miRanda miRanda
14034 chr1 227842132 227842132 1 + C A UCEC 227842116 + 227842096 227842136 41 CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGA CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCATTGA < 41bp 1 0.746773920309126 1 0.985480785369873 experiment 0.506452159381748 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842116 chr1:227842132 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_71787 0 0 1 7 227842128 227842148 mRNA hsa-miR-130b ZNF678 miRanda miRanda
14034 chr1 227842132 227842132 1 + C A UCEC 227842116 + 227842096 227842136 41 CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGA CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCATTGA < 41bp 1 0.746773920309126 1 0.985480785369873 experiment 0.506452159381748 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842116 chr1:227842132 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_71787 0 0 1 7 227842129 227842148 mRNA hsa-miR-454 ZNF678 miRanda miRanda
14034 chr1 227842132 227842132 1 + C A UCEC 227842116 + 227842096 227842136 41 CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGA CAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCATTGA < 41bp 1 0.746773920309126 1 0.985480785369873 experiment 0.506452159381748 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842116 chr1:227842132 nonsynonymous SNV 0.020 0 hm6A_associated_SNPs_71787 0 0 1 7 227842130 227842148 mRNA hsa-miR-301b ZNF678 miRanda miRanda
14034 chr1 63902590 63902590 1 + T C UCEC 63902570 + 63902550 63902590 41 TCCTCCTCAGAAACTACCGGACTTGTTTTCTGTATTGGTGT TCCTCCTCAGAAACTACCGGACTTGTTTTCTGTATTGGTGC < 41bp 1 0.722893671059677 1 0.908739268779755 experiment 0.554212657880646 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 41 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63902570 chr1:63902590 nonsynonymous SNV 0.936 3 hm6A_associated_SNPs_71836 0 0 1 2 63902572 63902593 mRNA hsa-miR-362-3p ALG6 miRanda miRanda
14034 chr1 63902590 63902590 1 + T C UCEC 63902570 + 63902550 63902590 41 TCCTCCTCAGAAACTACCGGACTTGTTTTCTGTATTGGTGT TCCTCCTCAGAAACTACCGGACTTGTTTTCTGTATTGGTGC < 41bp 1 0.722893671059677 1 0.908739268779755 experiment 0.554212657880646 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 41 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63902570 chr1:63902590 nonsynonymous SNV 0.936 3 hm6A_associated_SNPs_71836 0 0 1 2 63902572 63902593 mRNA hsa-miR-329 ALG6 miRanda miRanda
14034 chr1 63902590 63902590 1 + T C UCEC 63902609 + 63902589 63902629 41 GTGTTTTGTATCTTGCTTGAACTTCCTGTTCTTCTTGGTAT GCGTTTTGTATCTTGCTTGAACTTCCTGTTCTTCTTGGTAT < 41bp 1 0.603438531087158 1 0.873476803302765 experiment 0.793122937825684 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63902609 chr1:63902590 nonsynonymous SNV 0.936 3 hm6A_associated_SNPs_71837 0 0 1 2 63902572 63902593 mRNA hsa-miR-362-3p ALG6 miRanda miRanda
14034 chr1 63902590 63902590 1 + T C UCEC 63902609 + 63902589 63902629 41 GTGTTTTGTATCTTGCTTGAACTTCCTGTTCTTCTTGGTAT GCGTTTTGTATCTTGCTTGAACTTCCTGTTCTTCTTGGTAT < 41bp 1 0.603438531087158 1 0.873476803302765 experiment 0.793122937825684 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 2 ALG6 ENSG00000088035 CDS Human protein_coding chr1:63902609 chr1:63902590 nonsynonymous SNV 0.936 3 hm6A_associated_SNPs_71837 0 0 1 2 63902572 63902593 mRNA hsa-miR-329 ALG6 miRanda miRanda
14034 chr6 42610209 42610209 1 + T C UCEC 42610197 + 42610177 42610217 41 ATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTC ATGCAGACGTGAGATGTTTGACAAGGATGTAGCAATGCTTC < 41bp 1 0.677108710962458 1 0.0317444801330566 experiment 0.645782578075084 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 UBR2 ENSG00000024048 CDS Human protein_coding chr6:42610197 chr6:42610209 nonsynonymous SNV 0.995 1 hm6A_associated_SNPs_71850 0 0 1 1 42610203 42610219 mRNA hsa-miR-653 UBR2 miRanda miRanda
14034 chr15 84228073 84228073 1 + G A UCEC 84228063 + 84228043 84228083 41 ACTAGACGATGAATTTCTTGACATGGAAAGGGTAAGAGCAT ACTAGACGATGAATTTCTTGACATGGAAAGAGTAAGAGCAT < 41bp 1 0.51350801133208 1 0.647314727306366 experiment 0.97298397733584 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 SH3GL3 ENSG00000140600 CDS Human protein_coding chr15:84228063 chr15:84228073 synonymous SNV . 0 hm6A_associated_SNPs_71886 0 0 0 1 84228067 84228073 mRNA hsa-miR-194 SH3GL3 miRanda miRanda
14034 chr1 39951411 39951411 1 + C T UCEC 39951425 + 39951405 39951445 41 TCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG TCCCAATCATGTCTAAGAAGACCACCACTGCCTCCCCCAGG < 41bp 1 0.377205610955579 1 0.921658039093018 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 7 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951425 chr1:39951411 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_71985 0 0 1 1 39951407 39951437 mRNA hsa-miR-34a MACF1 miRanda miRanda
14034 chrX 103220134 103220134 1 + T G UCEC 103220141 + 103220121 103220161 41 AGGAGAAAGAGTGTGTTCAAACATCATAAAATGGGGATCTC AGGAGAAAGAGTGGGTTCAAACATCATAAAATGGGGATCTC < 41bp 1 0.577057604971999 1 0.00794979929924011 experiment 0.845884790056003 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 TMSB15B ENSG00000158427 CDS Human protein_coding chrX:103220141 chrX:103220134 nonsynonymous SNV 0.016 1 hm6A_associated_SNPs_72015 0 0 0 1 103220122 103220144 mRNA hsa-miR-653 TMSB15B miRanda miRanda
14034 chr1 33066014 33066014 1 + T C UCEC 33066032 + 33066012 33066052 41 ATTAGGTAGCTGTAATGTGAACCAACAGAGCTGGCATGTCT ATCAGGTAGCTGTAATGTGAACCAACAGAGCTGGCATGTCT < 41bp 1 0.402860650747304 1 0.83879953622818 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZBTB8A ENSG00000160062 CDS Human protein_coding chr1:33066032 chr1:33066014 synonymous SNV . 0 hm6A_associated_SNPs_72024 0 0 0 2 33066013 33066032 mRNA hsa-miR-23a ZBTB8A miRanda miRanda
14034 chr1 33066014 33066014 1 + T C UCEC 33066032 + 33066012 33066052 41 ATTAGGTAGCTGTAATGTGAACCAACAGAGCTGGCATGTCT ATCAGGTAGCTGTAATGTGAACCAACAGAGCTGGCATGTCT < 41bp 1 0.402860650747304 1 0.83879953622818 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 ZBTB8A ENSG00000160062 CDS Human protein_coding chr1:33066032 chr1:33066014 synonymous SNV . 0 hm6A_associated_SNPs_72024 0 0 0 2 33066013 33066032 mRNA hsa-miR-23b ZBTB8A miRanda miRanda
14034 chr7 65751680 65751680 1 + T G UCEC 65751686 + 65751666 65751706 41 TGATCCCAAAATTATTGAAAACACTCGAAGGGTAAGTGAGA TGATCCCAAAATTAGTGAAAACACTCGAAGGGTAAGTGAGA < 41bp 1 0.300572646447697 1 0.0377633571624756 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 15 TPST1 ENSG00000169902 CDS Human protein_coding chr7:65751686 chr7:65751680 nonsynonymous SNV 0.995 1 hm6A_associated_SNPs_72038 0 0 0 1 65751671 65751693 mRNA hsa-miR-122 TPST1 miRanda miRanda
14034 chr11 837501 837501 1 + C T UCEC 837491 + 837471 837511 41 TGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTGGA TGGCAGCAACAACTCACAGGACTGGCGAGATAGTGAGTGGA < 41bp 1 0.403341894654789 1 0.990000426769257 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 31 CD151 ENSG00000177697 CDS Human protein_coding chr11:837491 chr11:837501 synonymous SNV . 0 hm6A_associated_SNPs_72081 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chr11 837501 837501 1 + C T UCEC 837500 + 837480 837520 41 CAACTCACAGGACTGGCGAGACAGTGAGTGGATCCGCTCAC CAACTCACAGGACTGGCGAGATAGTGAGTGGATCCGCTCAC Direct Loss 1 0.480229866973305 1 0.958280622959137 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 CD151 ENSG00000177697 CDS Human protein_coding chr11:837500 chr11:837501 synonymous SNV . 0 hm6A_associated_SNPs_72082 0 0 1 1 837493 837516 mRNA hsa-miR-127-3p CD151 miRanda miRanda
14034 chr7 135328020 135328020 1 + G C UCEC 135328039 + 135328019 135328059 41 TGATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA TCATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA < 41bp 1 0.686144840715943 1 0.52758514881134 experiment 0.627710318568115 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328039 chr7:135328020 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_72094 0 0 1 3 135327997 135328020 mRNA hsa-miR-25 NUP205 miRanda miRanda
14034 chr7 135328020 135328020 1 + G C UCEC 135328039 + 135328019 135328059 41 TGATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA TCATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA < 41bp 1 0.686144840715943 1 0.52758514881134 experiment 0.627710318568115 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328039 chr7:135328020 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_72094 0 0 1 3 135327997 135328020 mRNA hsa-miR-92a NUP205 miRanda miRanda
14034 chr7 135328020 135328020 1 + G C UCEC 135328039 + 135328019 135328059 41 TGATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA TCATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA < 41bp 1 0.686144840715943 1 0.52758514881134 experiment 0.627710318568115 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328039 chr7:135328020 nonsynonymous SNV 0.993 1 hm6A_associated_SNPs_72094 0 0 1 3 135327997 135328020 mRNA hsa-miR-92b NUP205 miRanda miRanda
14034 chr17 25628876 25628876 1 + C T UCEC 25628862 + 25628842 25628882 41 AGCTCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGAAA AGCTCCTGCAGCTCCTTTTGACAAGAAATGTGGTTGTGAAA < 41bp 1 0.716288063358287 1 0.921685814857483 experiment 0.567423873283426 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25628862 chr17:25628876 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_72125 0 0 1 2 25628873 25628894 mRNA hsa-miR-212 WSB1 miRanda miRanda
14034 chr17 25628876 25628876 1 + C T UCEC 25628862 + 25628842 25628882 41 AGCTCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGAAA AGCTCCTGCAGCTCCTTTTGACAAGAAATGTGGTTGTGAAA < 41bp 1 0.716288063358287 1 0.921685814857483 experiment 0.567423873283426 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25628862 chr17:25628876 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_72125 0 0 1 2 25628873 25628894 mRNA hsa-miR-132 WSB1 miRanda miRanda
14034 chr1 32560409 32560409 1 + T C UCEC 32560401 + 32560381 32560421 41 CCAGAACACACATTACTATGACAAGCGCTGGTCCTGTGAAC CCAGAACACACATTACTATGACAAGCGCCGGTCCTGTGAAC < 41bp 1 0.60231107556464 1 0.0226819515228271 experiment 0.79537784887072 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32560401 chr1:32560409 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_72154 0 0 1 1 32560409 32560433 mRNA hsa-miR-214 TMEM39B miRanda miRanda
14034 chr1 54675789 54675789 1 + G A UCEC 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TATTTATGATATGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.657777499627577 1 0.68118292093277 experiment 0.684445000744845 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675789 nonsynonymous SNV 0.107 0 hm6A_associated_SNPs_72170 0 0 1 2 54675774 54675793 mRNA hsa-miR-23a MRPL37 miRanda miRanda
14034 chr1 54675789 54675789 1 + G A UCEC 54675799 + 54675779 54675819 41 TATTTATGATGTGAAAAATGACACAGGTAAGGATCAATGTC TATTTATGATATGAAAAATGACACAGGTAAGGATCAATGTC < 41bp 1 0.657777499627577 1 0.68118292093277 experiment 0.684445000744845 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54675799 chr1:54675789 nonsynonymous SNV 0.107 0 hm6A_associated_SNPs_72170 0 0 1 2 54675774 54675793 mRNA hsa-miR-23b MRPL37 miRanda miRanda
14034 chr19 56888893 56888893 1 + G T UCEC 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CACCTGTCTTCCCTGATTGAACATTGGATAATTCACACTGG < 41bp 1 0.379048175726239 1 0.999006748199463 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 29 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888893 . . 0 hm6A_associated_SNPs_72232 0 0 1 2 56888883 56888906 mRNA hsa-miR-199a-5p ZNF542 miRanda miRanda
14034 chr19 56888893 56888893 1 + G T UCEC 56888885 + 56888865 56888905 41 CACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGG CACCTGTCTTCCCTGATTGAACATTGGATAATTCACACTGG < 41bp 1 0.379048175726239 1 0.999006748199463 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 29 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888885 chr19:56888893 . . 0 hm6A_associated_SNPs_72232 0 0 1 2 56888883 56888906 mRNA hsa-miR-199b-5p ZNF542 miRanda miRanda
14034 chr19 56888893 56888893 1 + G T UCEC 56888912 + 56888892 56888932 41 AGAATTCACACTGGAGAAAAACCATATCAATGTAAGGACTG ATAATTCACACTGGAGAAAAACCATATCAATGTAAGGACTG < 41bp 1 0.0775233147095687 1 0.998965442180634 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888912 chr19:56888893 . . 0 hm6A_associated_SNPs_72233 0 0 1 2 56888883 56888906 mRNA hsa-miR-199a-5p ZNF542 miRanda miRanda
14034 chr19 56888893 56888893 1 + G T UCEC 56888912 + 56888892 56888932 41 AGAATTCACACTGGAGAAAAACCATATCAATGTAAGGACTG ATAATTCACACTGGAGAAAAACCATATCAATGTAAGGACTG < 41bp 1 0.0775233147095687 1 0.998965442180634 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 2 ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888912 chr19:56888893 . . 0 hm6A_associated_SNPs_72233 0 0 1 2 56888883 56888906 mRNA hsa-miR-199b-5p ZNF542 miRanda miRanda
14034 chrX 73045005 73045005 1 - T C UCEC 73045003 - 73044983 73045023 41 AACTTTAAAATATACTGAAAACATAAGGGACTAAGCTTGTT AACTTTAAAATATACTGAGAACATAAGGGACTAAGCTTGTT < 41bp 1 0.482517244518528 1 0.627490341663361 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045003 chrX:73045005 . . 0 hm6A_associated_SNPs_72281 0 0 1 1 73044991 73045012 lncRNA hsa-miR-2114-5p XIST miRanda starBase2
14034 chrX 73045005 73045005 1 - T C UCEC 73045022 - 73045002 73045042 41 CACATGGAAACTGCTTTTAAACTTTAAAATATACTGAAAAC CACATGGAAACTGCTTTTAAACTTTAAAATATACTGAGAAC < 41bp 1 0.337622991762798 1 0.147791624069214 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 38 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045022 chrX:73045005 . . 0 hm6A_associated_SNPs_72282 0 0 1 1 73044991 73045012 lncRNA hsa-miR-2114-5p XIST miRanda starBase2
14034 chr17 9745864 9745864 1 + G A UCEC 9745853 + 9745833 9745873 41 GACACTGCTTGGCTCAGGGGACTTGGCAGACGATAGAGAAC GACACTGCTTGGCTCAGGGGACTTGGCAGACAATAGAGAAC < 41bp 1 0.182674261609922 1 0.955872178077698 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 32 GLP2R ENSG00000065325 CDS Human protein_coding chr17:9745853 chr17:9745864 synonymous SNV . 0 hm6A_associated_SNPs_72322 0 0 0 1 9745842 9745864 mRNA hsa-miR-346 GLP2R miRanda miRanda
14034 chr4 154510114 154510114 1 + A C UCEC 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACCTGGAATGTGGATTCTGAACTTGCAAATACATTGTATGA < 41bp 1 0.260605089139241 1 0.778985738754272 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510114 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_72370 0 0 1 3 154510101 154510122 mRNA hsa-miR-381 KIAA0922 miRanda miRanda
14034 chr4 154510114 154510114 1 + A C UCEC 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACCTGGAATGTGGATTCTGAACTTGCAAATACATTGTATGA < 41bp 1 0.260605089139241 1 0.778985738754272 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510114 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_72370 0 0 1 3 154510101 154510125 mRNA hsa-miR-544 KIAA0922 miRanda miRanda
14034 chr4 154510114 154510114 1 + A C UCEC 154510103 + 154510083 154510123 41 ACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGA ACCTGGAATGTGGATTCTGAACTTGCAAATACATTGTATGA < 41bp 1 0.260605089139241 1 0.778985738754272 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154510103 chr4:154510114 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_72370 0 0 1 3 154510101 154510122 mRNA hsa-miR-300 KIAA0922 miRanda miRanda
14034 chr16 29675378 29675378 1 + C T UCEC 29675374 + 29675354 29675394 41 TGTCATCAGTGCCCCAGGAAACCCCTCATGCAACCAGTCAT TGTCATCAGTGCCCCAGGAAACCCTTCATGCAACCAGTCAT < 41bp 1 0.316431665104445 1 0.996516346931458 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 25 SPN ENSG00000197471 CDS Human protein_coding chr16:29675374 chr16:29675378 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_72374 0 0 1 1 29675374 29675399 mRNA hsa-miR-125a-3p SPN miRanda miRanda
14034 chr7 86820315 86820315 1 + G A UCEC 86820296 + 86820276 86820316 41 CTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGGA CTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGAA < 41bp 1 0.667531411356726 1 0.192653477191925 experiment 0.664937177286548 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86820296 chr7:86820315 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_72413 0 0 1 2 86820315 86820338 mRNA hsa-miR-216a DMTF1 miRanda miRanda
14034 chr7 86820315 86820315 1 + G A UCEC 86820296 + 86820276 86820316 41 CTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGGA CTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGAA < 41bp 1 0.667531411356726 1 0.192653477191925 experiment 0.664937177286548 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86820296 chr7:86820315 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_72413 0 0 1 2 86820301 86820324 mRNA hsa-miR-142-3p DMTF1 miRanda miRanda
14034 chr8 124113225 124113225 1 + C T UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTCAGGTTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.398480042631288 1 0.000147968530654907 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113225 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_72439 0 0 0 5 124113207 124113229 mRNA hsa-miR-320a WDR67 miRanda miRanda
14034 chr8 124113225 124113225 1 + C T UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTCAGGTTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.398480042631288 1 0.000147968530654907 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113225 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_72439 0 0 0 5 124113217 124113236 mRNA hsa-miR-599 WDR67 miRanda miRanda
14034 chr8 124113225 124113225 1 + C T UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTCAGGTTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.398480042631288 1 0.000147968530654907 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113225 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_72439 0 0 0 5 124113207 124113229 mRNA hsa-miR-320b WDR67 miRanda miRanda
14034 chr8 124113225 124113225 1 + C T UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTCAGGTTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.398480042631288 1 0.000147968530654907 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113225 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_72439 0 0 0 5 124113209 124113229 mRNA hsa-miR-320c WDR67 miRanda miRanda
14034 chr8 124113225 124113225 1 + C T UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTCAGGTTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.398480042631288 1 0.000147968530654907 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 16 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113225 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_72439 0 0 0 5 124113210 124113229 mRNA hsa-miR-320d WDR67 miRanda miRanda
14034 chrX 23803874 23803874 1 + C A UCEC 23803859 + 23803839 23803879 41 TTGGTAGCAGAATGGAATGAACCATCCATCAACTTCTATAA TTGGTAGCAGAATGGAATGAACCATCCATCAACTTATATAA < 41bp 1 0.670106942558107 1 0.86578369140625 experiment 0.659786114883786 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 36 SAT1 ENSG00000130066 CDS Human protein_coding chrX:23803859 chrX:23803874 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_72520 0 0 1 1 23803852 23803874 mRNA hsa-miR-382 SAT1 miRanda miRanda
14034 chr10 72636366 72636366 1 + G A UCEC 72636360 + 72636340 72636380 41 AGCTATACAATTCCTAAAGGACATTCGAGAATCTGTCACTC AGCTATACAATTCCTAAAGGACATTCAAGAATCTGTCACTC < 41bp 1 0.766752968216386 1 0.943647623062134 experiment 0.466494063567228 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72636360 chr10:72636366 nonsynonymous SNV 0.831 1 hm6A_associated_SNPs_72537 0 0 1 1 72636358 72636379 mRNA hsa-miR-542-3p SGPL1 miRanda miRanda
14034 chr22 21288122 21288122 1 + G T UCEC 21288126 + 21288106 21288146 41 CCTGCCTACAGCAGAAGATAACCTGGAATATGTACGGACTC CCTGCCTACAGCAGAATATAACCTGGAATATGTACGGACTC < 41bp 1 0.688085837116085 1 0.940814733505249 experiment 0.62382832576783 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 17 CRKL ENSG00000099942 CDS Human protein_coding chr22:21288126 chr22:21288122 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_72561 0 0 1 1 21288108 21288130 mRNA hsa-miR-154 CRKL miRanda miRanda
14034 chrX 73046500 73046500 1 - G A UCEC 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACTTGGGGAAATCCCAAGATG < 41bp 1 0.583757227921783 1 0.919654130935669 experiment 0.832485544156434 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046500 . . 0 hm6A_associated_SNPs_72594 0 0 1 3 73046493 73046513 lncRNA hsa-miR-2355-5p XIST miRanda starBase2
14034 chrX 73046500 73046500 1 - G A UCEC 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACTTGGGGAAATCCCAAGATG < 41bp 1 0.583757227921783 1 0.919654130935669 experiment 0.832485544156434 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046500 . . 0 hm6A_associated_SNPs_72594 0 0 1 3 73046488 73046509 lncRNA hsa-miR-3167 XIST miRanda starBase2
14034 chrX 73046500 73046500 1 - G A UCEC 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAAGACTTGGGGAAATCCCAAGATG < 41bp 1 0.583757227921783 1 0.919654130935669 experiment 0.832485544156434 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046500 . . 0 hm6A_associated_SNPs_72594 0 0 1 3 73046488 73046509 lncRNA hsa-miR-876-5p XIST miRanda starBase2
14034 chr3 39453457 39453457 1 + C T UCEC 39453453 + 39453433 39453473 41 AGGAATTTCAGGGTGAATGGACTGCTCCCGCTCCTGAGTTC AGGAATTTCAGGGTGAATGGACTGTTCCCGCTCCTGAGTTC < 41bp 1 0.550556663103433 1 0.979564011096954 experiment 0.898886673793133 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 25 RPSA ENSG00000168028 CDS Human protein_coding chr3:39453453 chr3:39453457 nonsynonymous SNV 0.982 0 hm6A_associated_SNPs_72607 0 0 1 1 39453457 39453478 mRNA hsa-miR-873 RPSA miRanda miRanda
14034 chr11 71169525 71169525 1 + G A UCEC 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCGGACACCCTCTTGCACTCATTTC < 41bp 1 0.522969028106103 1 0.91184139251709 experiment 0.954061943787794 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169525 synonymous SNV . 0 hm6A_associated_SNPs_72622 0 0 1 1 71169518 71169539 mRNA hsa-miR-378 NADSYN1 miRanda miRanda
14034 chr2 86352141 86352141 1 + T C UCEC 86352126 + 86352106 86352146 41 TCTTGTGTCTAGAGCAAAAAACAACGCTGAGAGAATCTTTT TCTTGTGTCTAGAGCAAAAAACAACGCTGAGAGAACCTTTT < 41bp 1 0.708234575619411 1 0.0105423331260681 experiment 0.583530848761178 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 36 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352126 chr2:86352141 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_72686 0 0 1 1 86352140 86352161 mRNA hsa-miR-330-5p PTCD3 miRanda miRanda
14034 chr8 94730972 94730972 1 + G A UCEC 94730991 + 94730971 94731011 41 TGCCTACCAGAATATACAAAACATTGATGAAGATGAAGATT TACCTACCAGAATATACAAAACATTGATGAAGATGAAGATT < 41bp 1 0.651625859150508 1 0.029433935880661 experiment 0.696748281698985 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 2 FAM92A ENSG00000188343 CDS Human protein_coding chr8:94730991 chr8:94730972 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_72687 0 0 0 1 94730954 94730973 mRNA hsa-miR-128 FAM92A1 miRanda miRanda
14034 chr14 23240752 23240752 1 + C T UCEC 23240767 + 23240747 23240787 41 TGGCACGACACACTTGGCTGACTTATGTTCTGTGCGCATTC TGGCATGACACACTTGGCTGACTTATGTTCTGTGCGCATTC < 41bp 1 0.586022098528996 1 0.796959519386292 experiment 0.827955802942008 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240767 chr14:23240752 synonymous SNV . 0 hm6A_associated_SNPs_72704 0 0 1 1 23240739 23240762 mRNA hsa-miR-382 OXA1L miRanda miRanda
14034 chr12 104705134 104705134 1 + T C UCEC 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCAAGTCCCATGACTATGACCTTATCATCATTG < 41bp 1 0.445012006806639 1 0.849401295185089 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705134 nonsynonymous SNV 0.927 1 hm6A_associated_SNPs_72722 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705134 104705134 1 + T C UCEC 104705138 + 104705118 104705158 41 AGATCTTCCCAAGTCCTATGACTATGACCTTATCATCATTG AGATCTTCCCAAGTCCCATGACTATGACCTTATCATCATTG < 41bp 1 0.445012006806639 1 0.849401295185089 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705138 chr12:104705134 nonsynonymous SNV 0.927 1 hm6A_associated_SNPs_72722 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr12 104705134 104705134 1 + T C UCEC 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCAAGTCCCATGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.289792838956434 1 0.7195143699646 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705134 nonsynonymous SNV 0.927 1 hm6A_associated_SNPs_72723 0 0 1 2 104705119 104705139 mRNA hsa-miR-376a TXNRD1 miRanda miRanda
14034 chr12 104705134 104705134 1 + T C UCEC 104705144 + 104705124 104705164 41 TCCCAAGTCCTATGACTATGACCTTATCATCATTGGAGGTG TCCCAAGTCCCATGACTATGACCTTATCATCATTGGAGGTG < 41bp 1 0.289792838956434 1 0.7195143699646 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104705144 chr12:104705134 nonsynonymous SNV 0.927 1 hm6A_associated_SNPs_72723 0 0 1 2 104705118 104705139 mRNA hsa-miR-376b TXNRD1 miRanda miRanda
14034 chr1 76256985 76256985 1 + G T UCEC 76256979 + 76256959 76256999 41 TTTTATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTG TTTTATTGTAGGAGAAATTGACACAATATTCTCTTTTTGTG < 41bp 1 0.682971970206843 1 0.263308465480804 experiment 0.634056059586314 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 27 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256979 chr1:76256985 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_72726 0 0 1 1 76256970 76256985 mRNA hsa-miR-599 RABGGTB miRanda miRanda
14034 chr2 61413591 61413591 1 + A C UCEC 61413584 + 61413564 61413604 41 TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATG TTCCCCTCTCTTTTCAGTTAACAAATACGAAGATCATCATG < 41bp 1 0.457251341834355 1 0.885965466499329 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413584 chr2:61413591 nonsynonymous SNV 0.895 0 hm6A_associated_SNPs_72747 0 0 1 1 61413585 61413606 mRNA hsa-miR-433 AHSA2 miRanda miRanda
14034 chr17 76396812 76396812 1 + G A UCEC 76396796 + 76396776 76396816 41 CTACTTCACCAACCGCCAGGACCGCTACGTGTTCCTGCAGG CTACTTCACCAACCGCCAGGACCGCTACGTGTTCCTACAGG < 41bp 1 0.195108141028853 1 0.743304669857025 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HEK293T;Heat_shock 37 PGS1 ENSG00000087157 CDS Human protein_coding chr17:76396796 chr17:76396812 synonymous SNV . 0 hm6A_associated_SNPs_72836 0 0 1 1 76396794 76396813 mRNA hsa-miR-873 PGS1 miRanda miRanda
14034 chr6 31541458 31541458 1 + C A UCEC 31541472 + 31541452 31541492 41 TGGAGCCTTCGCTCTGTAGAACTTGGAAAAATCCAGAAAGA TGGAGCATTCGCTCTGTAGAACTTGGAAAAATCCAGAAAGA < 41bp 1 0.646879320289223 1 0.745672762393951 experiment 0.706241359421554 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 7 LTA ENSG00000226979 CDS Human protein_coding chr6:31541472 chr6:31541458 synonymous SNV . 0 hm6A_associated_SNPs_72846 0 0 0 1 31541451 31541471 mRNA hsa-miR-139-5p LTA miRanda miRanda
14034 chr22 21288129 21288129 1 + T C UCEC 21288126 + 21288106 21288146 41 CCTGCCTACAGCAGAAGATAACCTGGAATATGTACGGACTC CCTGCCTACAGCAGAAGATAACCCGGAATATGTACGGACTC < 41bp 1 0.601396504045417 1 0.957451045513153 experiment 0.797206991909166 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 CRKL ENSG00000099942 CDS Human protein_coding chr22:21288126 chr22:21288129 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_72855 0 0 1 1 21288108 21288130 mRNA hsa-miR-154 CRKL miRanda miRanda
14034 chr17 30521050 30521050 1 + G T UCEC 30521053 + 30521033 30521073 41 TCCAGAGAGGGAGACACGAAACTACTTGGACTGTGCTTCGA TCCAGAGAGGGAGACACTAAACTACTTGGACTGTGCTTCGA < 41bp 1 0.341256552384065 1 0.720120310783386 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 18 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521053 chr17:30521050 stopgain 1.000 1 hm6A_associated_SNPs_72879 0 0 1 1 30521030 30521051 mRNA hsa-miR-187 RHOT1 miRanda miRanda
14034 chr4 147104096 147104096 1 + C A UCEC 147104092 + 147104072 147104112 41 AAATGAGTCTTCGGAAGCAAACCCCTAGTGACTTCTTAAAG AAATGAGTCTTCGGAAGCAAACCCATAGTGACTTCTTAAAG < 41bp 1 0.150214212108936 1 0.156478226184845 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 LSM6 ENSG00000164167 CDS Human protein_coding chr4:147104092 chr4:147104096 nonsynonymous SNV 0.978 4 hm6A_associated_SNPs_72880 0 0 1 1 147104086 147104106 mRNA hsa-miR-224 LSM6 miRanda miRanda
14034 chr11 86017376 86017376 1 + G A UCEC 86017383 + 86017363 86017403 41 TTGTGGTTTTTATGCTGGGAACAATCCCATTTCCTGAGGGA TTGTGGTTTTTATACTGGGAACAATCCCATTTCCTGAGGGA < 41bp 1 0.75611102108298 1 0.53808182477951 experiment 0.48777795783404 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 14 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017383 chr11:86017376 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_72888 0 0 1 2 86017368 86017389 mRNA hsa-miR-219-5p C11orf73 miRanda miRanda
14034 chr11 86017376 86017376 1 + G A UCEC 86017383 + 86017363 86017403 41 TTGTGGTTTTTATGCTGGGAACAATCCCATTTCCTGAGGGA TTGTGGTTTTTATACTGGGAACAATCCCATTTCCTGAGGGA < 41bp 1 0.75611102108298 1 0.53808182477951 experiment 0.48777795783404 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 14 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017383 chr11:86017376 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_72888 0 0 1 2 86017360 86017381 mRNA hsa-miR-338-3p C11orf73 miRanda miRanda
14034 chr3 56628026 56628026 1 + C T UCEC 56628041 + 56628021 56628061 41 CGAGACAGACGACGACAAAAACAATTAGAGCATCAGGTATT CGAGATAGACGACGACAAAAACAATTAGAGCATCAGGTATT < 41bp 1 0.556732827306154 1 0.413863390684128 experiment 0.886534345387693 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 6 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56628041 chr3:56628026 synonymous SNV . 0 hm6A_associated_SNPs_72953 0 0 1 1 56628019 56628042 mRNA hsa-miR-129-5p CCDC66 miRanda miRanda
14034 chr6 42985611 42985611 1 + C T UCEC 42985626 + 42985606 42985646 41 TCACACCCCGAGTGTCAGGGACAGTTCCTGGGGCCCGGGAT TCACATCCCGAGTGTCAGGGACAGTTCCTGGGGCCCGGGAT < 41bp 1 0.760282162142427 1 0.097300112247467 experiment 0.479435675715145 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985626 chr6:42985611 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_72956 0 0 1 1 42985607 42985629 mRNA hsa-miR-874 KLHDC3 miRanda miRanda
14034 chr17 34163188 34163188 1 + G A UCEC 34163182 + 34163162 34163202 41 AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTCTAC AACACAATCTTTGTGCAAGGACTTGGAGAGGGTGTGTCTAC < 41bp 1 0.545162113830868 1 0.766356825828552 experiment 0.909675772338263 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 27 TAF15 ENSG00000172660 CDS Human other chr17:34163182 chr17:34163188 synonymous SNV . 0 hm6A_associated_SNPs_72971 0 0 1 2 34163177 34163199 mRNA hsa-miR-362-3p TAF15 miRanda miRanda
14034 chr17 34163188 34163188 1 + G A UCEC 34163182 + 34163162 34163202 41 AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTCTAC AACACAATCTTTGTGCAAGGACTTGGAGAGGGTGTGTCTAC < 41bp 1 0.545162113830868 1 0.766356825828552 experiment 0.909675772338263 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 27 TAF15 ENSG00000172660 CDS Human other chr17:34163182 chr17:34163188 synonymous SNV . 0 hm6A_associated_SNPs_72971 0 0 1 2 34163177 34163199 mRNA hsa-miR-329 TAF15 miRanda miRanda
14034 chr16 30198425 30198425 1 + G T UCEC 30198413 + 30198393 30198433 41 GCACTGGGGCGGCCATGCTGACACTGGGCCCAGAGGTGCAC GCACTGGGGCGGCCATGCTGACACTGGGCCCATAGGTGCAC < 41bp 1 0.649564981450884 1 0.928624033927917 experiment 0.700870037098231 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 33 CORO1A ENSG00000102879 CDS Human protein_coding chr16:30198413 chr16:30198425 stopgain 0.979 1 hm6A_associated_SNPs_73049 0 0 0 1 30198424 30198443 mRNA hsa-miR-187 CORO1A miRanda miRanda
14034 chr10 91497516 91497516 1 + G T UCEC 91497506 + 91497486 91497526 41 AATTGTCAAATGAGATAGAAACTGCTACAAGAAGCATTACA AATTGTCAAATGAGATAGAAACTGCTACAATAAGCATTACA < 41bp 1 0.756528647858973 1 0.988757491111755 experiment 0.486942704282053 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 31 KIF20B ENSG00000138182 CDS Human protein_coding chr10:91497506 chr10:91497516 nonsynonymous SNV 0.896 1 hm6A_associated_SNPs_73058 0 0 1 1 91497503 91497525 mRNA hsa-miR-155 KIF20B miRanda miRanda
14034 chr4 155805 155805 1 + A G UCEC 155795 + 155775 155815 41 CAGTCCTCACACTTGAATAAACATAAGAAAATTCACACTGT CAGTCCTCACACTTGAATAAACATAAGAAAGTTCACACTGT < 41bp 1 0.0264340232998606 1 0.996533274650574 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 31 ZNF718 ENSG00000250312 ncRNA_exonic Human protein_coding chr4:155795 chr4:155805 . 0.034 0 hm6A_associated_SNPs_73061 0 0 0 2 155796 155818 mRNA hsa-miR-139-5p ZNF718 miRanda miRanda
14034 chr4 155805 155805 1 + A G UCEC 155795 + 155775 155815 41 CAGTCCTCACACTTGAATAAACATAAGAAAATTCACACTGT CAGTCCTCACACTTGAATAAACATAAGAAAGTTCACACTGT < 41bp 1 0.0264340232998606 1 0.996533274650574 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 31 ZNF718 ENSG00000250312 ncRNA_exonic Human protein_coding chr4:155795 chr4:155805 . 0.034 0 hm6A_associated_SNPs_73061 0 0 0 2 155792 155815 mRNA hsa-miR-125a-3p ZNF718 miRanda miRanda
14034 chr4 128627962 128627962 1 + G T UCEC 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAGAAGAACGCTTTTTGGTGACTATTCCTTAAATACACGCA < 41bp 1 0.611095923203882 1 0.90149450302124 experiment 0.777808153592236 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627962 nonsynonymous SNV 0.032 1 hm6A_associated_SNPs_73067 0 0 0 2 128627962 128627984 mRNA hsa-miR-7 INTU miRanda miRanda
14034 chr4 128627962 128627962 1 + G T UCEC 128627949 + 128627929 128627969 41 CAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCA CAGAAGAACGCTTTTTGGTGACTATTCCTTAAATACACGCA < 41bp 1 0.611095923203882 1 0.90149450302124 experiment 0.777808153592236 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31279658;GSE122948;miCLIP;HEK293T;Control 34 INTU ENSG00000164066 CDS Human protein_coding chr4:128627949 chr4:128627962 nonsynonymous SNV 0.032 1 hm6A_associated_SNPs_73067 0 0 0 2 128627947 128627968 mRNA hsa-miR-187 INTU miRanda miRanda
14034 chr1 76226871 76226871 1 + A G UCEC 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTGCCA < 41bp 1 0.265596439937606 1 0.147541552782059 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226871 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_73077 0 0 1 4 76226870 76226891 mRNA hsa-miR-150 ACADM miRanda miRanda
14034 chr1 76226871 76226871 1 + A G UCEC 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTGCCA < 41bp 1 0.265596439937606 1 0.147541552782059 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226871 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_73077 0 0 1 4 76226857 76226878 mRNA hsa-miR-330-5p ACADM miRanda miRanda
14034 chr1 76226871 76226871 1 + A G UCEC 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTGCCA < 41bp 1 0.265596439937606 1 0.147541552782059 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226871 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_73077 0 0 1 4 76226859 76226878 mRNA hsa-miR-326 ACADM miRanda miRanda
14034 chr1 76226871 76226871 1 + A G UCEC 76226854 + 76226834 76226874 41 GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTACCA GAAATGGCAATGAAAGTTGAACTAGCTAGAATGAGTTGCCA < 41bp 1 0.265596439937606 1 0.147541552782059 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 38 ACADM ENSG00000117054 CDS Human protein_coding chr1:76226854 chr1:76226871 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_73077 0 0 1 4 76226867 76226886 mRNA hsa-miR-520d-3p ACADM miRanda miRanda
14034 chr5 162869126 162869126 1 + G A UCEC 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAAAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.659564300327294 1 0.354432463645935 experiment 0.680871399345413 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869126 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_73103 0 0 1 4 162869110 162869132 mRNA hsa-miR-181b CCNG1 miRanda miRanda
14034 chr5 162869126 162869126 1 + G A UCEC 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAAAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.659564300327294 1 0.354432463645935 experiment 0.680871399345413 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869126 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_73103 0 0 1 4 162869126 162869147 mRNA hsa-miR-1 CCNG1 miRanda miRanda
14034 chr5 162869126 162869126 1 + G A UCEC 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAAAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.659564300327294 1 0.354432463645935 experiment 0.680871399345413 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869126 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_73103 0 0 1 4 162869121 162869147 mRNA hsa-miR-206 CCNG1 miRanda miRanda
14034 chr5 162869126 162869126 1 + G A UCEC 162869140 + 162869120 162869160 41 GGAATAGAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG GGAATAAAATGTCTTCAGAAACATTCCAAGGTATGTGAAGG < 41bp 1 0.659564300327294 1 0.354432463645935 experiment 0.680871399345413 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869140 chr5:162869126 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_73103 0 0 1 4 162869110 162869132 mRNA hsa-miR-181d CCNG1 miRanda miRanda
14034 chr18 48573393 48573393 1 + A G UCEC 48573407 + 48573387 48573427 41 TATTTGATTTAAAAGGAAAAACTTGAACAAATGGACAATAT TATTTGGTTTAAAAGGAAAAACTTGAACAAATGGACAATAT < 41bp 1 0.725922527312612 1 0.970618784427643 experiment 0.548154945374776 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 SMAD4 ENSG00000267699 CDS Human protein_coding chr18:48573407 chr18:48573393 stoploss . 0 hm6A_associated_SNPs_73111 0 0 1 2 48573392 48573413 mRNA hsa-miR-26a SMAD4 miRanda miRanda
14034 chr18 48573393 48573393 1 + A G UCEC 48573407 + 48573387 48573427 41 TATTTGATTTAAAAGGAAAAACTTGAACAAATGGACAATAT TATTTGGTTTAAAAGGAAAAACTTGAACAAATGGACAATAT < 41bp 1 0.725922527312612 1 0.970618784427643 experiment 0.548154945374776 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 7 SMAD4 ENSG00000267699 CDS Human protein_coding chr18:48573407 chr18:48573393 stoploss . 0 hm6A_associated_SNPs_73111 0 0 1 2 48573393 48573413 mRNA hsa-miR-26b SMAD4 miRanda miRanda
14034 chr19 19033521 19033521 1 + C T UCEC 19033520 + 19033500 19033540 41 CTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTTCA CTTCCAGGATGAGCACGAGGATTGGTCCATTATCATCTTCA Direct Loss 1 0.288855252646745 1 0.982019424438477 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 DDX49 ENSG00000105671 CDS Human protein_coding chr19:19033520 chr19:19033521 synonymous SNV . 0 hm6A_associated_SNPs_73141 0 0 1 1 19033518 19033541 mRNA hsa-miR-203 DDX49 miRanda miRanda
14034 chr8 22054347 22054347 1 + C T UCEC 22054339 + 22054319 22054359 41 TGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTAAGT TGCAGTTTGACTTCTTTGAGACAGAGGGTAATGATGTAAGT < 41bp 1 0.352832338670015 1 0.92052173614502 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 29 BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054339 chr8:22054347 synonymous SNV . 0 hm6A_associated_SNPs_73174 0 0 1 1 22054346 22054353 mRNA hsa-miR-431 BMP1 miRanda miRanda
14034 chr16 72048450 72048450 1 + G T UCEC 72048455 + 72048435 72048475 41 CATGGGGAAGCCGTGGACGGACTTTATAAGATGGGCTTTGG CATGGGGAAGCCGTGTACGGACTTTATAAGATGGGCTTTGG < 41bp 1 0.623497027633686 1 0.949424624443054 experiment 0.753005944732627 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 16 DHODH ENSG00000102967 CDS Human protein_coding chr16:72048455 chr16:72048450 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_73182 0 0 1 1 72048442 72048463 mRNA hsa-miR-340 DHODH miRanda miRanda
14034 chr9 98678625 98678625 1 + C T UCEC 98678635 + 98678615 98678655 41 GGCCGAAAGGCCATGCAAAGACTTGCCAAAAAGATGTCTGG GGCCGAAAGGTCATGCAAAGACTTGCCAAAAAGATGTCTGG < 41bp 1 0.224059139167041 1 0.97213876247406 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98678635 chr9:98678625 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_73199 0 0 1 2 98678621 98678644 mRNA hsa-miR-182 C9orf102 miRanda miRanda
14034 chr9 98678625 98678625 1 + C T UCEC 98678635 + 98678615 98678655 41 GGCCGAAAGGCCATGCAAAGACTTGCCAAAAAGATGTCTGG GGCCGAAAGGTCATGCAAAGACTTGCCAAAAAGATGTCTGG < 41bp 1 0.224059139167041 1 0.97213876247406 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 11 ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98678635 chr9:98678625 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_73199 0 0 1 2 98678615 98678637 mRNA hsa-miR-431 C9orf102 miRanda miRanda
14034 chr1 211486162 211486162 1 + G A UCEC 211486149 + 211486129 211486169 41 AGTGAAGAACTTCTTTGTAAACTACAGGCGTCGGTTTAACT AGTGAAGAACTTCTTTGTAAACTACAGGCGTCGATTTAACT < 41bp 1 0.260957631961095 1 0.921359539031982 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486149 chr1:211486162 synonymous SNV . 0 hm6A_associated_SNPs_73214 0 0 1 1 211486140 211486163 mRNA hsa-miR-615-3p RCOR3 miRanda miRanda
14034 chr10 70502184 70502184 1 + G A UCEC 70502193 + 70502173 70502213 41 CTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCA CTCAGCCAACAACACAAATAACTGTATCATATCCAACACCA < 41bp 1 0.384324738327988 1 0.330321311950684 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 CCAR1 ENSG00000060339;ENSG00000060339 exonic;splicing Human other chr10:70502193 chr10:70502184 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73227 0 0 1 1 70502169 70502189 mRNA hsa-miR-218 CCAR1 miRanda miRanda
14034 chr1 150461542 150461542 1 + C T UCEC 150461523 + 150461503 150461543 41 GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTCG GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTTG < 41bp 1 0.14604482269138 1 0.839710533618927 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 TARS2 ENSG00000143374 CDS Human protein_coding chr1:150461523 chr1:150461542 synonymous SNV . 0 hm6A_associated_SNPs_73263 1 0 1 2 150461532 150461555 mRNA hsa-miR-330-5p TARS2 miRanda miRanda
14034 chr1 150461542 150461542 1 + C T UCEC 150461523 + 150461503 150461543 41 GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTCG GCCCTTGGAGACAGATTCTGACCTCAGATTTCTGACATTTG < 41bp 1 0.14604482269138 1 0.839710533618927 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 TARS2 ENSG00000143374 CDS Human protein_coding chr1:150461523 chr1:150461542 synonymous SNV . 0 hm6A_associated_SNPs_73263 1 0 1 2 150461536 150461555 mRNA hsa-miR-326 TARS2 miRanda miRanda
14034 chr3 39453434 39453434 1 + G T UCEC 39453453 + 39453433 39453473 41 AGGAATTTCAGGGTGAATGGACTGCTCCCGCTCCTGAGTTC ATGAATTTCAGGGTGAATGGACTGCTCCCGCTCCTGAGTTC < 41bp 1 0.529039044362858 1 0.964465498924255 experiment 0.941921911274285 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 2 RPSA ENSG00000168028 CDS Human protein_coding chr3:39453453 chr3:39453434 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_73267 0 0 1 1 39453428 39453448 mRNA hsa-miR-504 RPSA miRanda miRanda
14034 chr6 31591635 31591635 1 + C A UCEC 31591646 + 31591626 31591666 41 CACTAGTGCCAAAAGACGGAACAGGATGGGCAAGCAAACAG CACTAGTGCAAAAAGACGGAACAGGATGGGCAAGCAAACAG < 41bp 1 0.718362074541652 1 0.940734803676605 experiment 0.563275850916697 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31591646 chr6:31591635 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_73324 0 0 1 2 31591615 31591638 mRNA hsa-miR-96 BAT2 miRanda miRanda
14034 chr6 31591635 31591635 1 + C A UCEC 31591646 + 31591626 31591666 41 CACTAGTGCCAAAAGACGGAACAGGATGGGCAAGCAAACAG CACTAGTGCAAAAAGACGGAACAGGATGGGCAAGCAAACAG < 41bp 1 0.718362074541652 1 0.940734803676605 experiment 0.563275850916697 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31591646 chr6:31591635 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_73324 0 0 1 2 31591617 31591638 mRNA hsa-miR-1271 BAT2 miRanda miRanda
14034 chr10 97920167 97920167 1 + A G UCEC 97920174 + 97920154 97920194 41 AAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGA AAGTAGTAAGTGTGATGAAAACTATTGCTAAATTTAATGGA < 41bp 1 0.538405210240805 1 0.98936665058136 experiment 0.92318957951839 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920174 chr10:97920167 . . 0 hm6A_associated_SNPs_73340 0 0 1 6 97920150 97920170 mRNA hsa-miR-25 ZNF518A miRanda miRanda
14034 chr10 97920167 97920167 1 + A G UCEC 97920174 + 97920154 97920194 41 AAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGA AAGTAGTAAGTGTGATGAAAACTATTGCTAAATTTAATGGA < 41bp 1 0.538405210240805 1 0.98936665058136 experiment 0.92318957951839 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920174 chr10:97920167 . . 0 hm6A_associated_SNPs_73340 0 0 1 6 97920149 97920170 mRNA hsa-miR-92a ZNF518A miRanda miRanda
14034 chr10 97920167 97920167 1 + A G UCEC 97920174 + 97920154 97920194 41 AAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGA AAGTAGTAAGTGTGATGAAAACTATTGCTAAATTTAATGGA < 41bp 1 0.538405210240805 1 0.98936665058136 experiment 0.92318957951839 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920174 chr10:97920167 . . 0 hm6A_associated_SNPs_73340 0 0 1 6 97920162 97920185 mRNA hsa-miR-182 ZNF518A miRanda miRanda
14034 chr10 97920167 97920167 1 + A G UCEC 97920174 + 97920154 97920194 41 AAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGA AAGTAGTAAGTGTGATGAAAACTATTGCTAAATTTAATGGA < 41bp 1 0.538405210240805 1 0.98936665058136 experiment 0.92318957951839 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920174 chr10:97920167 . . 0 hm6A_associated_SNPs_73340 0 0 1 6 97920149 97920170 mRNA hsa-miR-363 ZNF518A miRanda miRanda
14034 chr10 97920167 97920167 1 + A G UCEC 97920174 + 97920154 97920194 41 AAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGA AAGTAGTAAGTGTGATGAAAACTATTGCTAAATTTAATGGA < 41bp 1 0.538405210240805 1 0.98936665058136 experiment 0.92318957951839 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920174 chr10:97920167 . . 0 hm6A_associated_SNPs_73340 0 0 1 6 97920147 97920170 mRNA hsa-miR-367 ZNF518A miRanda miRanda
14034 chr10 97920167 97920167 1 + A G UCEC 97920174 + 97920154 97920194 41 AAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGA AAGTAGTAAGTGTGATGAAAACTATTGCTAAATTTAATGGA < 41bp 1 0.538405210240805 1 0.98936665058136 experiment 0.92318957951839 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 14 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920174 chr10:97920167 . . 0 hm6A_associated_SNPs_73340 0 0 1 6 97920149 97920170 mRNA hsa-miR-92b ZNF518A miRanda miRanda
14034 chr15 91485677 91485677 1 + C T UCEC 91485667 + 91485647 91485687 41 GTTTACCTCTCCCACCCCAGACAGTGGCAACCCTGAGCATA GTTTACCTCTCCCACCCCAGACAGTGGCAATCCTGAGCATA < 41bp 1 0.240370811431872 1 0.25854480266571 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 31 UNC45A ENSG00000140553 CDS Human protein_coding chr15:91485667 chr15:91485677 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_73372 0 0 1 1 91485667 91485681 mRNA hsa-miR-296-3p UNC45A miRanda miRanda
14034 chr19 9452567 9452567 1 + C T UCEC 9452562 + 9452542 9452582 41 AAAACTGATATCGGAGAGGAACTTCCTAACTGTAATCAATG AAAACTGATATCGGAGAGGAACTTCTTAACTGTAATCAATG < 41bp 1 0.507078134539461 1 0.993093609809875 experiment 0.985843730921078 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 26 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452562 chr19:9452567 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_73376 0 0 1 2 9452566 9452586 mRNA hsa-miR-23a ZNF559 miRanda miRanda
14034 chr19 9452567 9452567 1 + C T UCEC 9452562 + 9452542 9452582 41 AAAACTGATATCGGAGAGGAACTTCCTAACTGTAATCAATG AAAACTGATATCGGAGAGGAACTTCTTAACTGTAATCAATG < 41bp 1 0.507078134539461 1 0.993093609809875 experiment 0.985843730921078 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 26 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452562 chr19:9452567 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_73376 0 0 1 2 9452566 9452586 mRNA hsa-miR-23b ZNF559 miRanda miRanda
14034 chr9 32436325 32436325 1 + A G UCEC 32436315 + 32436295 32436335 41 ACGCCGTCATGGCACGGGGAACATTTGCCAACATTCGCTTG ACGCCGTCATGGCACGGGGAACATTTGCCAGCATTCGCTTG < 41bp 1 0.668122619828883 1 0.39992818236351 experiment 0.663754760342233 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436315 chr9:32436325 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73391 0 0 0 3 32436304 32436326 mRNA hsa-miR-96 ACO1 miRanda miRanda
14034 chr9 32436325 32436325 1 + A G UCEC 32436315 + 32436295 32436335 41 ACGCCGTCATGGCACGGGGAACATTTGCCAACATTCGCTTG ACGCCGTCATGGCACGGGGAACATTTGCCAGCATTCGCTTG < 41bp 1 0.668122619828883 1 0.39992818236351 experiment 0.663754760342233 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436315 chr9:32436325 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73391 0 0 0 3 32436303 32436326 mRNA hsa-miR-182 ACO1 miRanda miRanda
14034 chr9 32436325 32436325 1 + A G UCEC 32436315 + 32436295 32436335 41 ACGCCGTCATGGCACGGGGAACATTTGCCAACATTCGCTTG ACGCCGTCATGGCACGGGGAACATTTGCCAGCATTCGCTTG < 41bp 1 0.668122619828883 1 0.39992818236351 experiment 0.663754760342233 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436315 chr9:32436325 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73391 0 0 0 3 32436305 32436326 mRNA hsa-miR-1271 ACO1 miRanda miRanda
14034 chr9 32436325 32436325 1 + A G UCEC 32436340 + 32436320 32436360 41 TGCCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG TGCCAGCATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG < 41bp 1 0.543328047861534 1 0.36977806687355 experiment 0.913343904276931 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 6 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436340 chr9:32436325 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73392 0 0 0 3 32436304 32436326 mRNA hsa-miR-96 ACO1 miRanda miRanda
14034 chr9 32436325 32436325 1 + A G UCEC 32436340 + 32436320 32436360 41 TGCCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG TGCCAGCATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG < 41bp 1 0.543328047861534 1 0.36977806687355 experiment 0.913343904276931 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 6 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436340 chr9:32436325 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73392 0 0 0 3 32436303 32436326 mRNA hsa-miR-182 ACO1 miRanda miRanda
14034 chr9 32436325 32436325 1 + A G UCEC 32436340 + 32436320 32436360 41 TGCCAACATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG TGCCAGCATTCGCTTGTTAAACAGATTTTTGAACAAGCAGG < 41bp 1 0.543328047861534 1 0.36977806687355 experiment 0.913343904276931 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 6 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32436340 chr9:32436325 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73392 0 0 0 3 32436305 32436326 mRNA hsa-miR-1271 ACO1 miRanda miRanda
14034 chr13 76378506 76378506 1 + C T UCEC 76378523 + 76378503 76378543 41 TTTCGGCTGTTGAGCCAAAGACTGCGTTACCCTTCAATCGT TTTTGGCTGTTGAGCCAAAGACTGCGTTACCCTTCAATCGT < 41bp 1 0.213980659253383 1 0.964674770832062 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 LMO7 ENSG00000136153 CDS Human protein_coding chr13:76378523 chr13:76378506 nonsynonymous SNV 0.970 1 hm6A_associated_SNPs_73394 0 0 1 1 76378495 76378516 mRNA hsa-miR-421 LMO7 miRanda miRanda
14034 chr9 139983439 139983439 1 + A T UCEC 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGAGAACTTTCCTGAGATTTCGTCAC < 41bp 1 0.797467983544468 1 0.857917785644531 experiment 0.405064032911065 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983439 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_73430 0 0 1 2 139983419 139983443 mRNA hsa-miR-196a MAN1B1 miRanda miRanda
14034 chr9 139983439 139983439 1 + A T UCEC 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGAGAACTTTCCTGAGATTTCGTCAC < 41bp 1 0.797467983544468 1 0.857917785644531 experiment 0.405064032911065 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 25 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983439 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_73430 0 0 1 2 139983428 139983449 mRNA hsa-miR-216a MAN1B1 miRanda miRanda
14034 chr12 7023099 7023099 1 + G A UCEC 7023117 + 7023097 7023137 41 GGGCAGCCACCACATGTATGACAGAGAACAGAGGATGCCTG GGACAGCCACCACATGTATGACAGAGAACAGAGGATGCCTG < 41bp 1 0.772023557067067 1 0.791720271110535 experiment 0.455952885865865 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 LRRC23 ENSG00000010626 CDS Human protein_coding chr12:7023117 chr12:7023099 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_73449 0 0 1 1 7023097 7023119 mRNA hsa-miR-505 LRRC23 miRanda miRanda
14034 chr1 233807181 233807181 1 + G C UCEC 233807182 + 233807162 233807202 41 GTCCTTCTCCTCGATCACAGACCAGGCAGCTGGCATGAAAG GTCCTTCTCCTCGATCACACACCAGGCAGCTGGCATGAAAG Direct Loss 1 0.696412523267991 1 0.924607336521149 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807182 chr1:233807181 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_73457 0 0 1 1 233807172 233807193 mRNA hsa-miR-22 KCNK1 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741520 123741543 mRNA hsa-miR-302a C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741519 123741543 mRNA hsa-miR-302b C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741519 123741543 mRNA hsa-miR-302c C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741520 123741543 mRNA hsa-miR-302d C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741517 123741543 mRNA hsa-miR-373 C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741522 123741543 mRNA hsa-miR-520e C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741521 123741543 mRNA hsa-miR-520a-3p C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741522 123741543 mRNA hsa-miR-520b C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741521 123741543 mRNA hsa-miR-520c-3p C12orf65 miRanda miRanda
14034 chr12 123741525 123741525 1 + G A UCEC 123741519 + 123741499 123741539 41 GGAAAAAAAGAGCAAAGGAAACCCTGGAAAAAAAGAAGCTA GGAAAAAAAGAGCAAAGGAAACCCTGAAAAAAAAGAAGCTA < 41bp 1 0.672728938830815 1 0.987814247608185 experiment 0.654542122338371 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 27 C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123741519 chr12:123741525 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_73474 0 0 1 10 123741521 123741543 mRNA hsa-miR-520d-3p C12orf65 miRanda miRanda
14034 chr8 33356712 33356712 1 + G A UCEC 33356722 + 33356702 33356742 41 TGTAGGGTGCGCCTTCAGAAACCTGCTGCACTTTTCTGATA TGTAGGGTGCACCTTCAGAAACCTGCTGCACTTTTCTGATA < 41bp 1 0.474750642239539 1 0.0428662002086639 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 TTI2 ENSG00000129696 CDS Human protein_coding chr8:33356722 chr8:33356712 synonymous SNV . 0 hm6A_associated_SNPs_73487 0 0 1 3 33356710 33356736 mRNA hsa-miR-93 MAK16 miRanda miRanda
14034 chr8 33356712 33356712 1 + G A UCEC 33356722 + 33356702 33356742 41 TGTAGGGTGCGCCTTCAGAAACCTGCTGCACTTTTCTGATA TGTAGGGTGCACCTTCAGAAACCTGCTGCACTTTTCTGATA < 41bp 1 0.474750642239539 1 0.0428662002086639 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 TTI2 ENSG00000129696 CDS Human protein_coding chr8:33356722 chr8:33356712 synonymous SNV . 0 hm6A_associated_SNPs_73487 0 0 1 3 33356709 33356730 mRNA hsa-miR-214 MAK16 miRanda miRanda
14034 chr8 33356712 33356712 1 + G A UCEC 33356722 + 33356702 33356742 41 TGTAGGGTGCGCCTTCAGAAACCTGCTGCACTTTTCTGATA TGTAGGGTGCACCTTCAGAAACCTGCTGCACTTTTCTGATA < 41bp 1 0.474750642239539 1 0.0428662002086639 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 11 TTI2 ENSG00000129696 CDS Human protein_coding chr8:33356722 chr8:33356712 synonymous SNV . 0 hm6A_associated_SNPs_73487 0 0 1 3 33356710 33356736 mRNA hsa-miR-20b MAK16 miRanda miRanda
14034 chr1 53279348 53279348 1 + A G UCEC 53279354 + 53279334 53279374 41 CATTTAATATCCAGAGGTGAACAAGCTTGGACATTGAGTCG CATTTAATATCCAGGGGTGAACAAGCTTGGACATTGAGTCG < 41bp 1 0.667514428708445 1 0.14374452829361 experiment 0.66497114258311 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53279354 chr1:53279348 synonymous SNV . 0 hm6A_associated_SNPs_73501 0 0 1 1 53279339 53279362 mRNA hsa-miR-382 ZYG11B miRanda miRanda
14034 chr1 54670825 54670825 1 + G A UCEC 54670840 + 54670820 54670860 41 CTCACGCCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG CTCACACCCGTCTCTGGCAGACCACTGAGGAAATCCCCAAG < 41bp 1 0.207316274245725 1 0.913100004196167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670840 chr1:54670825 nonsynonymous SNV 0.953 3 hm6A_associated_SNPs_73502 0 0 1 1 54670821 54670842 mRNA hsa-miR-346 MRPL37 miRanda miRanda
14034 chr16 75611255 75611255 1 + T G UCEC 75611251 + 75611231 75611271 41 TGTGGCCTACAGCGGAGAGAACACTTTTGGCTTCTGAGGGC TGTGGCCTACAGCGGAGAGAACACGTTTGGCTTCTGAGGGC < 41bp 1 0.794797371565514 1 0.861937522888184 experiment 0.410405256868972 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 25 GABARAPL2 ENSG00000034713 CDS Human protein_coding chr16:75611251 chr16:75611255 synonymous SNV . 0 hm6A_associated_SNPs_73510 0 0 1 1 75611253 75611274 mRNA hsa-miR-328 GABARAPL2 miRanda miRanda
14034 chr13 48937085 48937085 1 + A G UCEC 48937072 + 48937052 48937092 41 ATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGA ATTGAAGTTCTCTGTAAAGAACATGAATGTAATGTAGATGA < 41bp 1 0.487869914920037 1 0.0445719361305237 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 RB1 ENSG00000139687 CDS Human protein_coding chr13:48937072 chr13:48937085 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_73537 0 0 1 1 48937067 48937087 mRNA hsa-miR-410 RB1 miRanda miRanda
14034 chr1 112246061 112246061 1 + T C UCEC 112246068 + 112246048 112246088 41 GACTTACAGGACCTGAGGGAACAGATTTTACGGGTTAAGGA GACTTACAGGACCCGAGGGAACAGATTTTACGGGTTAAGGA < 41bp 1 0.500742541854508 1 0.785681068897247 experiment 0.998514916290984 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 14 RAP1A ENSG00000116473 CDS Human protein_coding chr1:112246068 chr1:112246061 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73550 0 0 1 2 112246061 112246083 mRNA hsa-miR-99a RAP1A miRanda miRanda
14034 chr1 112246061 112246061 1 + T C UCEC 112246068 + 112246048 112246088 41 GACTTACAGGACCTGAGGGAACAGATTTTACGGGTTAAGGA GACTTACAGGACCCGAGGGAACAGATTTTACGGGTTAAGGA < 41bp 1 0.500742541854508 1 0.785681068897247 experiment 0.998514916290984 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control|31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 14 RAP1A ENSG00000116473 CDS Human protein_coding chr1:112246068 chr1:112246061 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73550 0 0 1 2 112246061 112246083 mRNA hsa-miR-100 RAP1A miRanda miRanda
14034 chr1 211486098 211486098 1 + C T UCEC 211486118 + 211486098 211486138 41 CAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAGAAC TAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAGAAC < 41bp 1 0.435747509455267 1 0.977573752403259 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 1 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486118 chr1:211486098 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73552 0 0 1 1 211486081 211486103 mRNA hsa-miR-544 RCOR3 miRanda miRanda
14034 chr16 89804413 89804413 1 - A G UCEC 89804400 - 89804380 89804420 41 TGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGG TGCCCGCCGCCTGCACTGGAACCCACAGACCTCACACCTGG < 41bp 1 0.777153107068053 1 0.77555912733078 experiment 0.445693785863893 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804400 chr16:89804413 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_73554 0 0 1 3 89804402 89804423 mRNA hsa-miR-148a FANCA miRanda miRanda
14034 chr16 89804413 89804413 1 - A G UCEC 89804400 - 89804380 89804420 41 TGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGG TGCCCGCCGCCTGCACTGGAACCCACAGACCTCACACCTGG < 41bp 1 0.777153107068053 1 0.77555912733078 experiment 0.445693785863893 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804400 chr16:89804413 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_73554 0 0 1 3 89804402 89804421 mRNA hsa-miR-152 FANCA miRanda miRanda
14034 chr16 89804413 89804413 1 - A G UCEC 89804400 - 89804380 89804420 41 TGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGG TGCCCGCCGCCTGCACTGGAACCCACAGACCTCACACCTGG < 41bp 1 0.777153107068053 1 0.77555912733078 experiment 0.445693785863893 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804400 chr16:89804413 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_73554 0 0 1 3 89804402 89804423 mRNA hsa-miR-148b FANCA miRanda miRanda
14034 chr17 2228042 2228042 1 + C T UCEC 2228041 + 2228021 2228061 41 GTAAAAATTTTGAAAGGATGACCACTCAGAACAACTCTCTT GTAAAAATTTTGAAAGGATGATCACTCAGAACAACTCTCTT Direct Loss 1 0.511019436988338 1 0.866236805915833 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 22 TSR1 ENSG00000167721 CDS Human protein_coding chr17:2228041 chr17:2228042 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73561 0 0 1 1 2228028 2228047 mRNA hsa-miR-140-5p SRR miRanda miRanda
14034 chr22 41305142 41305142 1 + G A UCEC 41305157 + 41305137 41305177 41 ATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTG ATGCCAGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTG < 41bp 1 0.340765312224861 1 0.00151693820953369 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 6 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41305157 chr22:41305142 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_73573 0 0 1 1 41305136 41305159 mRNA hsa-miR-346 XPNPEP3 miRanda miRanda
14034 chr8 22052355 22052355 1 + C T UCEC 22052343 + 22052323 22052363 41 TGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC TGGCTATGAGAAGCCTGATGACATCAAGAGCATGTCCAGCC < 41bp 1 0.583564537650487 1 0.9634889960289 experiment 0.832870924699026 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 BMP1 ENSG00000168487 CDS Human protein_coding chr8:22052343 chr8:22052355 nonsynonymous SNV 0.743 3 hm6A_associated_SNPs_73619 0 0 0 1 22052333 22052357 mRNA hsa-miR-187 BMP1 miRanda miRanda
14034 chr18 13752398 13752398 1 + T C UCEC 13752381 + 13752361 13752401 41 GAGAAGGTGGATGACTATGAACATGCAGCAAAGTACATGAA GAGAAGGTGGATGACTATGAACATGCAGCAAAGTACACGAA < 41bp 1 0.698004941405048 1 0.592068552970886 experiment 0.603990117189904 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 38 RNMT ENSG00000101654 CDS Human protein_coding chr18:13752381 chr18:13752398 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_73628 0 0 1 1 13752391 13752412 mRNA hsa-miR-134 RNMT miRanda miRanda
14034 chr21 33039586 33039586 1 + G A UCEC 33039596 + 33039576 33039616 41 TTGGAGACTTGGGCAATGTGACTGCTGACAAAGATGGTGTG TTGGAGACTTAGGCAATGTGACTGCTGACAAAGATGGTGTG < 41bp 1 0.332501345924801 1 0.939386308193207 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33039596 chr21:33039586 synonymous SNV . 0 hm6A_associated_SNPs_73641 0 0 1 3 33039577 33039597 mRNA hsa-miR-23a SOD1 miRanda miRanda
14034 chr21 33039586 33039586 1 + G A UCEC 33039596 + 33039576 33039616 41 TTGGAGACTTGGGCAATGTGACTGCTGACAAAGATGGTGTG TTGGAGACTTAGGCAATGTGACTGCTGACAAAGATGGTGTG < 41bp 1 0.332501345924801 1 0.939386308193207 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33039596 chr21:33039586 synonymous SNV . 0 hm6A_associated_SNPs_73641 0 0 1 3 33039577 33039597 mRNA hsa-miR-23b SOD1 miRanda miRanda
14034 chr21 33039586 33039586 1 + G A UCEC 33039596 + 33039576 33039616 41 TTGGAGACTTGGGCAATGTGACTGCTGACAAAGATGGTGTG TTGGAGACTTAGGCAATGTGACTGCTGACAAAGATGGTGTG < 41bp 1 0.332501345924801 1 0.939386308193207 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 11 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33039596 chr21:33039586 synonymous SNV . 0 hm6A_associated_SNPs_73641 0 0 1 3 33039581 33039602 mRNA hsa-miR-497 SOD1 miRanda miRanda
14034 chrX 48759573 48759573 1 + G A UCEC 48759561 + 48759541 48759581 41 CAAGTCGGACAGGGGCCATGACAAGTCGGACCGCAGCCATG CAAGTCGGACAGGGGCCATGACAAGTCGGACCACAGCCATG < 41bp 1 0.684163138087209 1 0.989420771598816 experiment 0.631673723825582 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 33 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759561 chrX:48759573 nonsynonymous SNV 0.142 2 hm6A_associated_SNPs_73684 1 0 1 1 48759571 48759593 mRNA hsa-miR-223 PQBP1 miRanda miRanda
14034 chrX 48759573 48759573 1 + G A UCEC 48759591 + 48759571 48759611 41 CCGCAGCCATGAGAAACTAGACAGGGGCCACGACAAGTCAG CCACAGCCATGAGAAACTAGACAGGGGCCACGACAAGTCAG < 41bp 1 0.559386227636558 1 0.958913803100586 experiment 0.881227544726884 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 3 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759591 chrX:48759573 nonsynonymous SNV 0.142 2 hm6A_associated_SNPs_73685 1 0 1 1 48759571 48759593 mRNA hsa-miR-223 PQBP1 miRanda miRanda
14034 chr11 836376 836376 1 + C T UCEC 836386 + 836366 836406 41 CGGGCACTGTCGTCATGGTGACTGGGGTCTTGGGCTGCTGC CGGGCACTGTTGTCATGGTGACTGGGGTCTTGGGCTGCTGC < 41bp 1 0.478950887777962 1 0.925643444061279 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 11 CD151 ENSG00000177697 CDS Human protein_coding chr11:836386 chr11:836376 synonymous SNV . 0 hm6A_associated_SNPs_73691 0 0 1 1 836368 836389 mRNA hsa-miR-29b CD151 miRanda miRanda
14034 chr1 100614343 100614343 1 + A G UCEC 100614332 + 100614312 100614352 41 CTTTGGAAAATGTTTTGTTAACTGCTTTACCAAATCATTCT CTTTGGAAAATGTTTTGTTAACTGCTTTACCGAATCATTCT < 41bp 1 0.536050805287146 1 0.857451319694519 experiment 0.927898389425709 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 32 TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100614332 chr1:100614343 synonymous SNV . 0 hm6A_associated_SNPs_73729 0 0 1 1 100614341 100614364 mRNA hsa-miR-138 CCDC76 miRanda miRanda
14034 chr6 27806627 27806627 1 + T C UCEC 27806645 + 27806625 27806665 41 CATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCG CACGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCG < 41bp 1 0.798835215227493 1 0.999418616294861 experiment 0.402329569545015 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806645 chr6:27806627 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_73765 0 0 1 2 27806606 27806630 mRNA hsa-miR-433 HIST1H2BN miRanda miRanda
14034 chr6 27806627 27806627 1 + T C UCEC 27806645 + 27806625 27806665 41 CATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCG CACGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCG < 41bp 1 0.798835215227493 1 0.999418616294861 experiment 0.402329569545015 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806645 chr6:27806627 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_73765 0 0 1 2 27806606 27806628 mRNA hsa-miR-455-5p HIST1H2BN miRanda miRanda
14034 chr4 155491682 155491682 1 + C T UCEC 155491676 + 155491656 155491696 41 GGCAGATACTACTGGGGTGGACAGTACACCTGGGACATGGC GGCAGATACTACTGGGGTGGACAGTATACCTGGGACATGGC < 41bp 1 0.768102616721177 1 0.969414472579956 experiment 0.463794766557647 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 27 FGB ENSG00000171564 CDS Human protein_coding chr4:155491676 chr4:155491682 synonymous SNV . 0 hm6A_associated_SNPs_73769 0 0 1 1 155491666 155491689 mRNA hsa-miR-199a-5p FGB miRanda miRanda
14034 chr4 155491682 155491682 1 + C T UCEC 155491690 + 155491670 155491710 41 GGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAG GGGTGGACAGTATACCTGGGACATGGCAAAGCATGGCACAG < 41bp 1 0.759915356718431 1 0.96037483215332 experiment 0.480169286563138 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 13 FGB ENSG00000171564 CDS Human protein_coding chr4:155491690 chr4:155491682 synonymous SNV . 0 hm6A_associated_SNPs_73770 0 0 1 1 155491666 155491689 mRNA hsa-miR-199a-5p FGB miRanda miRanda
14034 chr5 43173495 43173495 1 + C T UCEC 43173503 + 43173483 43173523 41 GTCACCTCACTGCATGCCAAACTGGAGTAGGGGCAAAAAAA GTCACCTCACTGTATGCCAAACTGGAGTAGGGGCAAAAAAA < 41bp 1 0.289213763059375 1 0.595551431179047 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43173503 chr5:43173495 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_73771 0 0 1 2 43173487 43173509 mRNA hsa-miR-145 ZNF131 miRanda miRanda
14034 chr5 43173495 43173495 1 + C T UCEC 43173503 + 43173483 43173523 41 GTCACCTCACTGCATGCCAAACTGGAGTAGGGGCAAAAAAA GTCACCTCACTGTATGCCAAACTGGAGTAGGGGCAAAAAAA < 41bp 1 0.289213763059375 1 0.595551431179047 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43173503 chr5:43173495 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_73771 0 0 1 2 43173485 43173510 mRNA hsa-miR-136 ZNF131 miRanda miRanda
14034 chr6 137147506 137147506 1 + G A UCEC 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTGACTTGGAGTGAGAACAACAAACATGTCCTCATCA < 41bp 1 0.716595094247568 1 0.0116631686687469 experiment 0.566809811504863 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 26 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147506 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_73778 0 0 1 2 137147505 137147526 mRNA hsa-miR-125a-3p PEX7 miRanda miRanda
14034 chr6 137147506 137147506 1 + G A UCEC 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTGACTTGGAGTGAGAACAACAAACATGTCCTCATCA < 41bp 1 0.716595094247568 1 0.0116631686687469 experiment 0.566809811504863 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 26 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147506 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_73778 0 0 1 2 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chr6 137147506 137147506 1 + G A UCEC 137147508 + 137147488 137147528 41 ACTTGGAGTGAGAACAACGAACATGTCCTCATCACCTGTAG ACTTGGAGTGAGAACAACAAACATGTCCTCATCACCTGTAG < 41bp 1 0.68596866410257 1 0.0175532698631287 experiment 0.628062671794859 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 19 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147508 chr6:137147506 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_73779 0 0 1 2 137147505 137147526 mRNA hsa-miR-125a-3p PEX7 miRanda miRanda
14034 chr6 137147506 137147506 1 + G A UCEC 137147508 + 137147488 137147528 41 ACTTGGAGTGAGAACAACGAACATGTCCTCATCACCTGTAG ACTTGGAGTGAGAACAACAAACATGTCCTCATCACCTGTAG < 41bp 1 0.68596866410257 1 0.0175532698631287 experiment 0.628062671794859 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 19 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147508 chr6:137147506 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_73779 0 0 1 2 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chrX 133609368 133609368 1 + G T UCEC 133609379 + 133609359 133609399 41 ATGACTGTAGATTTTATCAGACTGAAGAGCTATTGTGTGAG ATGACTGTATATTTTATCAGACTGAAGAGCTATTGTGTGAG < 41bp 1 0.132844759959787 1 0.853536784648895 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 HPRT1 ENSG00000165704 CDS Human protein_coding chrX:133609379 chrX:133609368 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_73780 0 0 1 3 133609349 133609369 mRNA hsa-miR-139-5p HPRT1 miRanda miRanda
14034 chrX 133609368 133609368 1 + G T UCEC 133609379 + 133609359 133609399 41 ATGACTGTAGATTTTATCAGACTGAAGAGCTATTGTGTGAG ATGACTGTATATTTTATCAGACTGAAGAGCTATTGTGTGAG < 41bp 1 0.132844759959787 1 0.853536784648895 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 HPRT1 ENSG00000165704 CDS Human protein_coding chrX:133609379 chrX:133609368 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_73780 0 0 1 3 133609349 133609368 mRNA hsa-miR-212 HPRT1 miRanda miRanda
14034 chrX 133609368 133609368 1 + G T UCEC 133609379 + 133609359 133609399 41 ATGACTGTAGATTTTATCAGACTGAAGAGCTATTGTGTGAG ATGACTGTATATTTTATCAGACTGAAGAGCTATTGTGTGAG < 41bp 1 0.132844759959787 1 0.853536784648895 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 HPRT1 ENSG00000165704 CDS Human protein_coding chrX:133609379 chrX:133609368 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_73780 0 0 1 3 133609348 133609368 mRNA hsa-miR-132 HPRT1 miRanda miRanda
14034 chr8 48877136 48877136 1 + A C UCEC 48877153 + 48877133 48877173 41 GGAAGTTATTCCAACTTTTGACATGGCTGTCAATGAAATCT GGACGTTATTCCAACTTTTGACATGGCTGTCAATGAAATCT < 41bp 1 0.636128956424598 1 0.329346060752869 experiment 0.727742087150803 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 4 MCM4 ENSG00000104738 CDS Human protein_coding chr8:48877153 chr8:48877136 nonsynonymous SNV 0.973 1 hm6A_associated_SNPs_73819 0 0 1 1 48877134 48877150 mRNA hsa-miR-382 MCM4 miRanda miRanda
14034 chrX 73040831 73040831 1 - C A UCEC 73040821 - 73040801 73040841 41 GATTAAACAAGAATAAGAGAACATTTTATCATCATCTGCTT GATTAAACAATAATAAGAGAACATTTTATCATCATCTGCTT < 41bp 1 0.407040738227855 1 0.276046097278595 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 11 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040821 chrX:73040831 . . 0 hm6A_associated_SNPs_73821 0 0 1 1 73040812 73040833 lncRNA hsa-miR-3163 XIST miRanda starBase2
14034 chr2 190728607 190728607 1 + G A UCEC 190728620 + 190728600 190728640 41 CCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCA CCCAGAAACACAAGTTAAAAACCTCATTATCTAATCAACCA < 41bp 1 0.594620156022554 1 0.935673832893372 experiment 0.810759687954892 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 8 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728620 chr2:190728607 synonymous SNV . 0 hm6A_associated_SNPs_73829 0 0 1 1 190728587 190728612 mRNA hsa-miR-218 PMS1 miRanda miRanda
14034 chr11 65269423 65269423 1 + G T UCEC 65269411 + 65269391 65269431 41 TAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAA TAGTTTATGATTGCAGATAAACTCATGCCAGATAACTTAAA < 41bp 1 0.138835886619781 1 0.821440875530243 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|32341503;GSE131316;m6A-Label-seq;HEK293T;Control 33 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269411 chr11:65269423 . . 0 hm6A_associated_SNPs_73845 0 0 1 1 65269418 65269438 lncRNA hsa-miR-499a-5p MALAT1 miRanda starBase2
14034 chr15 40326622 40326622 1 + T G UCEC 40326627 + 40326607 40326647 41 AGTCTGTGATGAAATTTATAACATCAAAGTAGAAAAAAAGT AGTCTGTGATGAAATGTATAACATCAAAGTAGAAAAAAAGT < 41bp 1 0.532798706409955 1 0.0846414566040039 experiment 0.93440258718009 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 16 EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40326627 chr15:40326622 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_73847 0 0 1 1 40326603 40326627 mRNA hsa-miR-340 EIF2AK4 miRanda miRanda
14034 chr7 104742558 104742558 1 + G T UCEC 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAGAAACTTAAACTGCACTAGCAGAA < 41bp 1 0.440133511744561 1 0.995286464691162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742558 stopgain 1.000 1 hm6A_associated_SNPs_73873 0 0 1 6 104742548 104742569 mRNA hsa-miR-130a MLL5 miRanda miRanda
14034 chr7 104742558 104742558 1 + G T UCEC 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAGAAACTTAAACTGCACTAGCAGAA < 41bp 1 0.440133511744561 1 0.995286464691162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742558 stopgain 1.000 1 hm6A_associated_SNPs_73873 0 0 1 6 104742547 104742569 mRNA hsa-miR-301a MLL5 miRanda miRanda
14034 chr7 104742558 104742558 1 + G T UCEC 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAGAAACTTAAACTGCACTAGCAGAA < 41bp 1 0.440133511744561 1 0.995286464691162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742558 stopgain 1.000 1 hm6A_associated_SNPs_73873 0 0 1 6 104742548 104742569 mRNA hsa-miR-130b MLL5 miRanda miRanda
14034 chr7 104742558 104742558 1 + G T UCEC 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAGAAACTTAAACTGCACTAGCAGAA < 41bp 1 0.440133511744561 1 0.995286464691162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742558 stopgain 1.000 1 hm6A_associated_SNPs_73873 0 0 1 6 104742555 104742576 mRNA hsa-miR-544 MLL5 miRanda miRanda
14034 chr7 104742558 104742558 1 + G T UCEC 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAGAAACTTAAACTGCACTAGCAGAA < 41bp 1 0.440133511744561 1 0.995286464691162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742558 stopgain 1.000 1 hm6A_associated_SNPs_73873 0 0 1 6 104742547 104742569 mRNA hsa-miR-454 MLL5 miRanda miRanda
14034 chr7 104742558 104742558 1 + G T UCEC 104742555 + 104742535 104742575 41 TACTTACAATAGAACCAGAAACTGAAACTGCACTAGCAGAA TACTTACAATAGAACCAGAAACTTAAACTGCACTAGCAGAA < 41bp 1 0.440133511744561 1 0.995286464691162 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104742555 chr7:104742558 stopgain 1.000 1 hm6A_associated_SNPs_73873 0 0 1 6 104742547 104742569 mRNA hsa-miR-301b MLL5 miRanda miRanda
14034 chr6 24409794 24409794 1 + G T UCEC 24409776 + 24409756 24409796 41 AATGAGTATCACAGTCAGAAACAATAGGATTATCATGAGAA AATGAGTATCACAGTCAGAAACAATAGGATTATCATGATAA < 41bp 1 0.711708068279041 1 0.00248509645462036 experiment 0.576583863441918 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 MRS2 ENSG00000124532 CDS Human protein_coding chr6:24409776 chr6:24409794 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73881 0 0 1 2 24409781 24409801 mRNA hsa-miR-136 MRS2 miRanda miRanda
14034 chr6 24409794 24409794 1 + G T UCEC 24409776 + 24409756 24409796 41 AATGAGTATCACAGTCAGAAACAATAGGATTATCATGAGAA AATGAGTATCACAGTCAGAAACAATAGGATTATCATGATAA < 41bp 1 0.711708068279041 1 0.00248509645462036 experiment 0.576583863441918 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 39 MRS2 ENSG00000124532 CDS Human protein_coding chr6:24409776 chr6:24409794 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73881 0 0 1 2 24409775 24409794 mRNA hsa-miR-433 MRS2 miRanda miRanda
14034 chr3 139065848 139065848 1 + C T UCEC 139065866 + 139065846 139065886 41 CACCAACCTATAAGCTAATGACTCAGGCACAGTTGGAAGAG CATCAACCTATAAGCTAATGACTCAGGCACAGTTGGAAGAG < 41bp 1 0.391002691308508 1 0.845541715621948 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065866 chr3:139065848 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73948 0 0 1 2 139065842 139065862 mRNA hsa-miR-21 MRPS22 miRanda miRanda
14034 chr3 139065848 139065848 1 + C T UCEC 139065866 + 139065846 139065886 41 CACCAACCTATAAGCTAATGACTCAGGCACAGTTGGAAGAG CATCAACCTATAAGCTAATGACTCAGGCACAGTTGGAAGAG < 41bp 1 0.391002691308508 1 0.845541715621948 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065866 chr3:139065848 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_73948 0 0 1 2 139065841 139065862 mRNA hsa-miR-590-5p MRPS22 miRanda miRanda
14034 chr17 28961078 28961078 1 + A G UCEC 28961072 + 28961052 28961092 41 TCATCTTCGCAATATCTGTGACTGTCATACTAATAATTTTG TCATCTTCGCAATATCTGTGACTGTCGTACTAATAATTTTG < 41bp 1 0.374602125853748 1 0.277366101741791 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961072 chr17:28961078 . . 0 hm6A_associated_SNPs_73954 0 0 1 3 28961078 28961099 mRNA hsa-miR-374a LRRC37B2 miRanda miRanda
14034 chr17 28961078 28961078 1 + A G UCEC 28961072 + 28961052 28961092 41 TCATCTTCGCAATATCTGTGACTGTCATACTAATAATTTTG TCATCTTCGCAATATCTGTGACTGTCGTACTAATAATTTTG < 41bp 1 0.374602125853748 1 0.277366101741791 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961072 chr17:28961078 . . 0 hm6A_associated_SNPs_73954 0 0 1 3 28961062 28961083 mRNA hsa-miR-411 LRRC37B2 miRanda miRanda
14034 chr17 28961078 28961078 1 + A G UCEC 28961072 + 28961052 28961092 41 TCATCTTCGCAATATCTGTGACTGTCATACTAATAATTTTG TCATCTTCGCAATATCTGTGACTGTCGTACTAATAATTTTG < 41bp 1 0.374602125853748 1 0.277366101741791 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961072 chr17:28961078 . . 0 hm6A_associated_SNPs_73954 0 0 1 3 28961078 28961099 mRNA hsa-miR-374b LRRC37B2 miRanda miRanda
14034 chr2 71653800 71653800 1 + T G UCEC 71653784 + 71653764 71653804 41 CCTCGTGGTGTTGAGGGAGAACTATCTTTTGTGACATTGGA CCTCGTGGTGTTGAGGGAGAACTATCTTTTGTGACAGTGGA < 41bp 1 0.765482618028589 1 0.995804071426392 experiment 0.469034763942822 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control 37 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653784 chr2:71653800 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_73996 0 0 1 1 71653795 71653812 mRNA hsa-miR-216a ZNF638 miRanda miRanda
14034 chr10 75673854 75673854 1 + G A UCEC 75673860 + 75673840 75673880 41 ACACAAGGACTACAGCGCTGACACGCTTGCTCACCACAACG ACACAAGGACTACAACGCTGACACGCTTGCTCACCACAACG < 41bp 1 0.489007315462534 1 0.962594628334045 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 PLAU ENSG00000122861 CDS Human protein_coding chr10:75673860 chr10:75673854 nonsynonymous SNV 0.123 1 hm6A_associated_SNPs_74007 0 0 0 1 75673849 75673871 mRNA hsa-miR-503 PLAU miRanda miRanda
14034 chr12 98925590 98925590 1 + C T UCEC 98925593 + 98925573 98925613 41 GAATGGAAGTAATGATTCTGACAGATACAGTGACAATGAAG GAATGGAAGTAATGATTTTGACAGATACAGTGACAATGAAG < 41bp 1 0.5311206006273 1 0.953467905521393 experiment 0.937758798745401 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925593 chr12:98925590 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74015 0 0 1 2 98925589 98925610 mRNA hsa-miR-25 TMPO miRanda miRanda
14034 chr12 98925590 98925590 1 + C T UCEC 98925593 + 98925573 98925613 41 GAATGGAAGTAATGATTCTGACAGATACAGTGACAATGAAG GAATGGAAGTAATGATTTTGACAGATACAGTGACAATGAAG < 41bp 1 0.5311206006273 1 0.953467905521393 experiment 0.937758798745401 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 18 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925593 chr12:98925590 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74015 0 0 1 2 98925588 98925610 mRNA hsa-miR-363 TMPO miRanda miRanda
14034 chr12 98925590 98925590 1 + C T UCEC 98925605 + 98925585 98925625 41 TGATTCTGACAGATACAGTGACAATGAAGAAGGTAAAATTT TGATTTTGACAGATACAGTGACAATGAAGAAGGTAAAATTT < 41bp 1 0.66905105168176 1 0.968138217926025 experiment 0.66189789663648 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925605 chr12:98925590 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74016 0 0 1 2 98925589 98925610 mRNA hsa-miR-25 TMPO miRanda miRanda
14034 chr12 98925590 98925590 1 + C T UCEC 98925605 + 98925585 98925625 41 TGATTCTGACAGATACAGTGACAATGAAGAAGGTAAAATTT TGATTTTGACAGATACAGTGACAATGAAGAAGGTAAAATTT < 41bp 1 0.66905105168176 1 0.968138217926025 experiment 0.66189789663648 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 6 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925605 chr12:98925590 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74016 0 0 1 2 98925588 98925610 mRNA hsa-miR-363 TMPO miRanda miRanda
14034 chr8 98731286 98731286 1 + G T UCEC 98731278 + 98731258 98731298 41 AGGTTATTTTTCTCTATAGGACACAGAAGAATTAGAAAAAG AGGTTATTTTTCTCTATAGGACACAGAATAATTAGAAAAAG < 41bp 1 0.500856904427964 1 0.000714629888534546 experiment 0.998286191144071 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 29 MTDH ENSG00000147649 CDS Human protein_coding chr8:98731278 chr8:98731286 stopgain 1.000 0 hm6A_associated_SNPs_74050 0 0 1 1 98731283 98731304 mRNA hsa-miR-216b MTDH miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008775 115008796 mRNA hsa-miR-15a CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008775 115008796 mRNA hsa-miR-16 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008773 115008795 mRNA hsa-miR-103 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008773 115008795 mRNA hsa-miR-107 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008775 115008796 mRNA hsa-miR-15b CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008776 115008796 mRNA hsa-miR-195 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008790 115008809 mRNA hsa-miR-371-5p CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008793 115008814 mRNA hsa-miR-375 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008775 115008796 mRNA hsa-miR-424 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008781 + 115008761 115008801 41 AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCGTTTTCT AGCAAGCTGTGTAATGAAGAACAGGAATTGCTGCATTTTCT < 41bp 1 0.56585183940481 1 0.781573295593262 experiment 0.86829632119038 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 35 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008781 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74051 0 0 1 10 115008777 115008796 mRNA hsa-miR-497 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008775 115008796 mRNA hsa-miR-15a CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008775 115008796 mRNA hsa-miR-16 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008773 115008795 mRNA hsa-miR-103 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008773 115008795 mRNA hsa-miR-107 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008775 115008796 mRNA hsa-miR-15b CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008776 115008796 mRNA hsa-miR-195 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008790 115008809 mRNA hsa-miR-371-5p CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008793 115008814 mRNA hsa-miR-375 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008775 115008796 mRNA hsa-miR-424 CDC16 miRanda miRanda
14034 chr13 115008795 115008795 1 + G A UCEC 115008810 + 115008790 115008830 41 GCTGCGTTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA GCTGCATTTTCTATTTGAGAACAAATTGAAAAAAGTAAGTA < 41bp 1 0.780621711912414 1 0.273709535598755 experiment 0.438756576175171 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 6 CDC16 ENSG00000130177 CDS Human protein_coding chr13:115008810 chr13:115008795 nonsynonymous SNV 0.988 0 hm6A_associated_SNPs_74052 0 0 1 10 115008777 115008796 mRNA hsa-miR-497 CDC16 miRanda miRanda
14034 chrX 73042486 73042486 1 - C A UCEC 73042480 - 73042460 73042500 41 CTCTTCATCAAACAGAAGTGACTGTTATCTCAACCATTTTG CTCTTCATCAAACATAAGTGACTGTTATCTCAACCATTTTG < 41bp 1 0.385019495584781 1 0.269064217805862 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042480 chrX:73042486 . . 0 hm6A_associated_SNPs_74059 0 0 1 3 73042474 73042494 lncRNA hsa-miR-132-3p XIST miRanda starBase2
14034 chrX 73042486 73042486 1 - C A UCEC 73042480 - 73042460 73042500 41 CTCTTCATCAAACAGAAGTGACTGTTATCTCAACCATTTTG CTCTTCATCAAACATAAGTGACTGTTATCTCAACCATTTTG < 41bp 1 0.385019495584781 1 0.269064217805862 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042480 chrX:73042486 . . 0 hm6A_associated_SNPs_74059 0 0 1 3 73042474 73042494 lncRNA hsa-miR-212-3p XIST miRanda starBase2
14034 chrX 73042486 73042486 1 - C A UCEC 73042480 - 73042460 73042500 41 CTCTTCATCAAACAGAAGTGACTGTTATCTCAACCATTTTG CTCTTCATCAAACATAAGTGACTGTTATCTCAACCATTTTG < 41bp 1 0.385019495584781 1 0.269064217805862 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|31279658;GSE122948;miCLIP;HEK293T;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042480 chrX:73042486 . . 0 hm6A_associated_SNPs_74059 0 0 1 3 73042461 73042487 lncRNA hsa-miR-224-3p XIST miRanda starBase2
14034 chr8 124113221 124113221 1 + C A UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTAAGGCTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.400721762197451 1 9.31322574615479e-05 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113221 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_74068 0 0 0 5 124113207 124113229 mRNA hsa-miR-320a WDR67 miRanda miRanda
14034 chr8 124113221 124113221 1 + C A UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTAAGGCTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.400721762197451 1 9.31322574615479e-05 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113221 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_74068 0 0 0 5 124113217 124113236 mRNA hsa-miR-599 WDR67 miRanda miRanda
14034 chr8 124113221 124113221 1 + C A UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTAAGGCTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.400721762197451 1 9.31322574615479e-05 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113221 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_74068 0 0 0 5 124113207 124113229 mRNA hsa-miR-320b WDR67 miRanda miRanda
14034 chr8 124113221 124113221 1 + C A UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTAAGGCTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.400721762197451 1 9.31322574615479e-05 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113221 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_74068 0 0 0 5 124113209 124113229 mRNA hsa-miR-320c WDR67 miRanda miRanda
14034 chr8 124113221 124113221 1 + C A UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTAAGGCTTTAACACAAGAAATAAATAAGGTA < 41bp 1 0.400721762197451 1 9.31322574615479e-05 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 12 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113221 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_74068 0 0 0 5 124113210 124113229 mRNA hsa-miR-320d WDR67 miRanda miRanda
14034 chr5 118582766 118582766 1 + T C UCEC 118582771 + 118582751 118582791 41 CCATTTTTAGAAATATTGGAACTGGAGTGATGCAAATTGAG CCATTTTTAGAAATACTGGAACTGGAGTGATGCAAATTGAG < 41bp 1 0.698864049732546 1 0.843155741691589 experiment 0.602271900534908 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 16 DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118582771 chr5:118582766 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_74074 0 0 1 1 118582758 118582777 mRNA hsa-miR-145 DMXL1 miRanda miRanda
14034 chr12 104720190 104720190 1 + G T UCEC 104720176 + 104720156 104720196 41 CAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAAGATAAAT CAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAATATAAAT < 41bp 1 0.122334219069519 1 0.000970751047134399 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 35 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104720176 chr12:104720190 nonsynonymous SNV 0.962 1 hm6A_associated_SNPs_74082 0 0 1 1 104720187 104720201 mRNA hsa-miR-145 TXNRD1 miRanda miRanda
14034 chr19 4944399 4944399 1 + G A UCEC 4944414 + 4944394 4944434 41 GTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGT GTCCCATCCAACCACTACGGACCCATCCCGGGGATCCCCGT < 41bp 1 0.126872529139616 1 0.965638637542725 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944414 chr19:4944399 . . 0 hm6A_associated_SNPs_74108 0 0 1 2 4944389 4944410 mRNA hsa-miR-140-5p UHRF1 miRanda miRanda
14034 chr19 4944399 4944399 1 + G A UCEC 4944414 + 4944394 4944434 41 GTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGT GTCCCATCCAACCACTACGGACCCATCCCGGGGATCCCCGT < 41bp 1 0.126872529139616 1 0.965638637542725 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944414 chr19:4944399 . . 0 hm6A_associated_SNPs_74108 0 0 1 2 4944389 4944410 mRNA hsa-miR-296-3p UHRF1 miRanda miRanda
14034 chr1 150307429 150307429 1 + C T UCEC 150307423 + 150307403 150307443 41 CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCAC CAGGAAGGTGGAGTTAAAAGACCAAATGAAACCTACACCAC < 41bp 1 0.425942983076859 1 0.564707696437836 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307423 chr1:150307429 nonsynonymous SNV 0.987 1 hm6A_associated_SNPs_74122 0 0 1 1 150307424 150307445 mRNA hsa-miR-140-5p PRPF3 miRanda miRanda
14034 chr3 124456509 124456509 1 + T G UCEC 124456507 + 124456487 124456527 41 GTGGATCTAGTGTTTTGGAAACTGTTGAGGTTCTTCAGAAG GTGGATCTAGTGTTTTGGAAACGGTTGAGGTTCTTCAGAAG Direct Loss 1 0.79366023648206 1 0.836710810661316 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 23 UMPS ENSG00000114491 CDS Human protein_coding chr3:124456507 chr3:124456509 synonymous SNV . 0 hm6A_associated_SNPs_74183 0 0 1 1 124456493 124456515 mRNA hsa-miR-421 UMPS miRanda miRanda
14034 chr4 79780768 79780768 1 + G T UCEC 79780763 + 79780743 79780783 41 ATGCTTGAACCAGATCCGGAACATAGACCTGATATATTTCA ATGCTTGAACCAGATCCGGAACATATACCTGATATATTTCA < 41bp 1 0.485995620245364 1 0.233081847429276 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 BMP2K ENSG00000138756 CDS Human protein_coding chr4:79780763 chr4:79780768 nonsynonymous SNV 0.905 4 hm6A_associated_SNPs_74214 0 0 1 1 79780756 79780777 mRNA hsa-miR-361-5p BMP2K miRanda miRanda
14034 chr5 162868318 162868318 1 + G A UCEC 162868322 + 162868302 162868342 41 TTATTCACTCCTTCAAGAGAACTTGCCACTTGAAAGGTAAG TTATTCACTCCTTCAAAAGAACTTGCCACTTGAAAGGTAAG < 41bp 1 0.34405968642388 1 0.896164119243622 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 17 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162868322 chr5:162868318 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_74218 0 0 1 1 162868309 162868332 mRNA hsa-miR-454 CCNG1 miRanda miRanda
14034 chr4 44682715 44682715 1 + A G UCEC 44682725 + 44682705 44682745 41 TTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTT TTATAGGGACGATTGATAAAACAAAGAATAATAAGCAGGTT < 41bp 1 0.631392340320198 1 0.486864030361176 experiment 0.737215319359603 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44682725 chr4:44682715 nonsynonymous SNV . 0 hm6A_associated_SNPs_74291 0 0 0 1 44682711 44682731 mRNA hsa-miR-9 GUF1 miRanda miRanda
14034 chr3 39450134 39450134 1 + G A UCEC 39450123 + 39450103 39450143 41 ATATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTG ATATCATAAATCTCAAGAGGACCTGGGAGAAACTTCTGCTG < 41bp 1 0.20539765950249 1 0.576237201690674 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450123 chr3:39450134 synonymous SNV . 0 hm6A_associated_SNPs_74293 0 0 1 1 39450129 39450150 mRNA hsa-miR-22 RPSA miRanda miRanda
14034 chr2 234363497 234363497 1 + G A UCEC 234363480 + 234363460 234363500 41 GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGATG GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCAATG < 41bp 1 0.303837506531185 1 0.990614056587219 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363480 chr2:234363497 nonsynonymous SNV 0.660 4 hm6A_associated_SNPs_74299 0 0 1 2 234363491 234363512 mRNA hsa-miR-330-5p DGKD miRanda miRanda
14034 chr2 234363497 234363497 1 + G A UCEC 234363480 + 234363460 234363500 41 GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCGATG GGATGCGAAGATATCCCTGGACTTTAACAACAAGCGCAATG < 41bp 1 0.303837506531185 1 0.990614056587219 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363480 chr2:234363497 nonsynonymous SNV 0.660 4 hm6A_associated_SNPs_74299 0 0 1 2 234363494 234363512 mRNA hsa-miR-326 DGKD miRanda miRanda
14034 chr2 234363497 234363497 1 + G A UCEC 234363486 + 234363466 234363506 41 GAAGATATCCCTGGACTTTAACAACAAGCGCGATGAGCACC GAAGATATCCCTGGACTTTAACAACAAGCGCAATGAGCACC < 41bp 1 0.520786658751499 1 0.927396178245544 experiment 0.958426682497002 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363486 chr2:234363497 nonsynonymous SNV 0.660 4 hm6A_associated_SNPs_74300 0 0 1 2 234363491 234363512 mRNA hsa-miR-330-5p DGKD miRanda miRanda
14034 chr2 234363497 234363497 1 + G A UCEC 234363486 + 234363466 234363506 41 GAAGATATCCCTGGACTTTAACAACAAGCGCGATGAGCACC GAAGATATCCCTGGACTTTAACAACAAGCGCAATGAGCACC < 41bp 1 0.520786658751499 1 0.927396178245544 experiment 0.958426682497002 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 DGKD ENSG00000077044 CDS Human protein_coding chr2:234363486 chr2:234363497 nonsynonymous SNV 0.660 4 hm6A_associated_SNPs_74300 0 0 1 2 234363494 234363512 mRNA hsa-miR-326 DGKD miRanda miRanda
14034 chr12 110475355 110475355 1 + A C UCEC 110475352 + 110475332 110475372 41 CTTACAGCTGTCACTCACTGACAAATAGACCTTTCAGCCTG CTTACAGCTGTCACTCACTGACACATAGACCTTTCAGCCTG < 41bp 1 0.660255190436006 1 0.93064421415329 experiment 0.679489619127988 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110475352 chr12:110475355 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_74305 0 0 1 1 110475347 110475368 mRNA hsa-miR-488 ANKRD13A miRanda miRanda
14034 chr12 110475355 110475355 1 + A C UCEC 110475360 + 110475340 110475380 41 TGTCACTCACTGACAAATAGACCTTTCAGCCTGTGAGCCTC TGTCACTCACTGACACATAGACCTTTCAGCCTGTGAGCCTC < 41bp 1 0.647465240725052 1 0.929567813873291 experiment 0.705069518549897 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 16 ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110475360 chr12:110475355 nonsynonymous SNV 0.987 4 hm6A_associated_SNPs_74306 0 0 1 1 110475347 110475368 mRNA hsa-miR-488 ANKRD13A miRanda miRanda
14034 chr14 66096316 66096316 1 + T C UCEC 66096313 + 66096293 66096333 41 AACTGGTTCAGCGGAGAATAACATATCTTCAGGTAAGAAGG AACTGGTTCAGCGGAGAATAACACATCTTCAGGTAAGAAGG < 41bp 1 0.11896718354893 1 0.374077141284943 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 FUT8 ENSG00000033170 CDS Human protein_coding chr14:66096313 chr14:66096316 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_74318 0 0 1 2 66096299 66096320 mRNA hsa-miR-190 FUT8 miRanda miRanda
14034 chr14 66096316 66096316 1 + T C UCEC 66096313 + 66096293 66096333 41 AACTGGTTCAGCGGAGAATAACATATCTTCAGGTAAGAAGG AACTGGTTCAGCGGAGAATAACACATCTTCAGGTAAGAAGG < 41bp 1 0.11896718354893 1 0.374077141284943 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 FUT8 ENSG00000033170 CDS Human protein_coding chr14:66096313 chr14:66096316 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_74318 0 0 1 2 66096300 66096320 mRNA hsa-miR-190b FUT8 miRanda miRanda
14034 chr1 75229703 75229703 1 + C G UCEC 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGGCC < 41bp 1 0.461726216322767 1 0.939206838607788 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229703 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_74322 0 0 1 3 75229683 75229705 mRNA hsa-miR-34a TYW3 miRanda miRanda
14034 chr1 75229703 75229703 1 + C G UCEC 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGGCC < 41bp 1 0.461726216322767 1 0.939206838607788 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229703 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_74322 0 0 1 3 75229683 75229705 mRNA hsa-miR-449a TYW3 miRanda miRanda
14034 chr1 75229703 75229703 1 + C G UCEC 75229685 + 75229665 75229705 41 TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGCCC TATTCATAAGAAAAAAAGAAACCCAGAAAAAACACGTGGCC < 41bp 1 0.461726216322767 1 0.939206838607788 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 TYW3 ENSG00000162623 CDS Human protein_coding chr1:75229685 chr1:75229703 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_74322 0 0 1 3 75229683 75229705 mRNA hsa-miR-449b TYW3 miRanda miRanda
14034 chr12 28515411 28515411 1 + G A UCEC 28515396 + 28515376 28515416 41 ACATAAACAAGAATTGGAAGACATGAGGAAAGCTGGTCACG ACATAAACAAGAATTGGAAGACATGAGGAAAGCTGATCACG < 41bp 1 0.387186731498032 1 0.429980397224426 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 36 CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28515396 chr12:28515411 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_74340 0 0 1 1 28515405 28515432 mRNA hsa-miR-155 CCDC91 miRanda miRanda
14034 chr10 74644046 74644046 1 + G T UCEC 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCATAGACAGACAATACTTACTATTTTTCCA < 41bp 1 0.66207859233514 1 0.0213907361030579 experiment 0.67584281532972 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644046 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_74364 0 0 1 6 74644039 74644059 mRNA hsa-miR-219-5p CCDC109A miRanda miRanda
14034 chr10 74644046 74644046 1 + G T UCEC 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCATAGACAGACAATACTTACTATTTTTCCA < 41bp 1 0.66207859233514 1 0.0213907361030579 experiment 0.67584281532972 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644046 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_74364 0 0 1 6 74644024 74644047 mRNA hsa-miR-135a CCDC109A miRanda miRanda
14034 chr10 74644046 74644046 1 + G T UCEC 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCATAGACAGACAATACTTACTATTTTTCCA < 41bp 1 0.66207859233514 1 0.0213907361030579 experiment 0.67584281532972 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644046 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_74364 0 0 1 6 74644028 74644049 mRNA hsa-miR-330-5p CCDC109A miRanda miRanda
14034 chr10 74644046 74644046 1 + G T UCEC 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCATAGACAGACAATACTTACTATTTTTCCA < 41bp 1 0.66207859233514 1 0.0213907361030579 experiment 0.67584281532972 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644046 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_74364 0 0 1 6 74644030 74644049 mRNA hsa-miR-326 CCDC109A miRanda miRanda
14034 chr10 74644046 74644046 1 + G T UCEC 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCATAGACAGACAATACTTACTATTTTTCCA < 41bp 1 0.66207859233514 1 0.0213907361030579 experiment 0.67584281532972 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644046 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_74364 0 0 1 6 74644024 74644047 mRNA hsa-miR-135b CCDC109A miRanda miRanda
14034 chr10 74644046 74644046 1 + G T UCEC 74644053 + 74644033 74644073 41 TATCCAGAAGCCAGAGACAGACAATACTTACTATTTTTCCA TATCCAGAAGCCATAGACAGACAATACTTACTATTTTTCCA < 41bp 1 0.66207859233514 1 0.0213907361030579 experiment 0.67584281532972 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 MCU ENSG00000156026 CDS Human protein_coding chr10:74644053 chr10:74644046 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_74364 0 0 1 6 74644041 74644062 mRNA hsa-miR-496 CCDC109A miRanda miRanda
14034 chr14 95081309 95081309 1 + G T UCEC 95081293 + 95081273 95081313 41 CTTTGCCACTGACTTTCAGGACTCAGCTGCAGCTAAGAAGC CTTTGCCACTGACTTTCAGGACTCAGCTGCAGCTAATAAGC < 41bp 1 0.459267784857548 1 0.998219907283783 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 37 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081293 chr14:95081309 nonsynonymous SNV 0.007 2 hm6A_associated_SNPs_74410 0 0 1 1 95081295 95081318 mRNA hsa-miR-135a SERPINA3 miRanda miRanda
14034 chr11 988679 988679 1 + G A UCEC 988660 + 988640 988680 41 AGATGCTGAGCTATCTGGAGACAGCTGACTACTCCATCCGA AGATGCTGAGCTATCTGGAGACAGCTGACTACTCCATCCAA < 41bp 1 0.401605113350623 1 0.90787136554718 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 40 AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988660 chr11:988679 nonsynonymous SNV 0.953 4 hm6A_associated_SNPs_74423 0 0 1 1 988669 988689 mRNA hsa-miR-216b AP2A2 miRanda miRanda
14034 chrX 47422716 47422716 1 + G A UCEC 47422698 + 47422678 47422718 41 GGTGCGGGGTCTAAATCAGGACTGCTGTGTGGTCTACCGAC GGTGCGGGGTCTAAATCAGGACTGCTGTGTGGTCTACCAAC < 41bp 1 0.217692612670752 1 0.899783730506897 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 39 ARAF ENSG00000078061 CDS Human protein_coding chrX:47422698 chrX:47422716 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_74426 0 0 1 1 47422696 47422716 mRNA hsa-miR-379 ARAF miRanda miRanda
14034 chr2 106509466 106509466 1 + C T UCEC 106509478 + 106509458 106509498 41 CCTTAAAGCGTCAGGGAAGAACAAACACTTCAAGGTGCAGC CCTTAAAGTGTCAGGGAAGAACAAACACTTCAAGGTGCAGC < 41bp 1 0.796928880658525 1 0.905607938766479 experiment 0.406142238682949 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 NCK2 ENSG00000071051 CDS Human protein_coding chr2:106509478 chr2:106509466 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_74445 0 0 1 1 106509464 106509482 mRNA hsa-miR-375 NCK2 miRanda miRanda
14034 chr11 117034519 117034519 1 + G A UCEC 117034507 + 117034487 117034527 41 TCATTGTTGTCTGGGTAGGAACAAATAACCACGAAAATACA TCATTGTTGTCTGGGTAGGAACAAATAACCACAAAAATACA < 41bp 1 0.600056691720616 1 0.0354523956775665 experiment 0.799886616558769 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117034507 chr11:117034519 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_74466 0 0 1 3 117034496 117034520 mRNA hsa-miR-140-5p PAFAH1B2 miRanda miRanda
14034 chr11 117034519 117034519 1 + G A UCEC 117034507 + 117034487 117034527 41 TCATTGTTGTCTGGGTAGGAACAAATAACCACGAAAATACA TCATTGTTGTCTGGGTAGGAACAAATAACCACAAAAATACA < 41bp 1 0.600056691720616 1 0.0354523956775665 experiment 0.799886616558769 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117034507 chr11:117034519 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_74466 0 0 1 3 117034512 117034533 mRNA hsa-miR-370 PAFAH1B2 miRanda miRanda
14034 chr11 117034519 117034519 1 + G A UCEC 117034507 + 117034487 117034527 41 TCATTGTTGTCTGGGTAGGAACAAATAACCACGAAAATACA TCATTGTTGTCTGGGTAGGAACAAATAACCACAAAAATACA < 41bp 1 0.600056691720616 1 0.0354523956775665 experiment 0.799886616558769 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 33 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117034507 chr11:117034519 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_74466 0 0 1 3 117034513 117034534 mRNA hsa-miR-544 PAFAH1B2 miRanda miRanda
14034 chr22 45258166 45258166 1 + G T UCEC 45258186 + 45258166 45258206 41 GAGCATCTTCAACAAAATGAACAGCTCTAACCTGGCCTGTG TAGCATCTTCAACAAAATGAACAGCTCTAACCTGGCCTGTG < 41bp 1 0.659263137258174 1 0.893330812454224 experiment 0.681473725483652 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45258186 chr22:45258166 stopgain 0.922 1 hm6A_associated_SNPs_74468 0 0 1 2 45258155 45258175 mRNA hsa-miR-520a-3p ARHGAP8 miRanda miRanda
14034 chr22 45258166 45258166 1 + G T UCEC 45258186 + 45258166 45258206 41 GAGCATCTTCAACAAAATGAACAGCTCTAACCTGGCCTGTG TAGCATCTTCAACAAAATGAACAGCTCTAACCTGGCCTGTG < 41bp 1 0.659263137258174 1 0.893330812454224 experiment 0.681473725483652 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 1 ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45258186 chr22:45258166 stopgain 0.922 1 hm6A_associated_SNPs_74468 0 0 1 2 45258161 45258180 mRNA hsa-miR-653 ARHGAP8 miRanda miRanda
14034 chr8 95877803 95877803 1 + G T UCEC 95877804 + 95877784 95877824 41 AAGTAGACGGACTGCCAAAGACCTTTGGGAAGTTGTTGTTC AAGTAGACGGACTGCCAAATACCTTTGGGAAGTTGTTGTTC Direct Loss 1 0.261564583061848 1 0.96537458896637 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 20 INTS8 ENSG00000164941 CDS Human protein_coding chr8:95877804 chr8:95877803 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74499 0 0 1 1 95877784 95877806 mRNA hsa-miR-431 INTS8 miRanda miRanda
14034 chr2 71185536 71185536 1 + C T UCEC 71185548 + 71185528 71185568 41 ACGAACTCCGGTGTCAGAGGACATGCTGGGTGAGGGACAGG ACGAACTCTGGTGTCAGAGGACATGCTGGGTGAGGGACAGG < 41bp 1 0.325156515322528 1 0.521281003952026 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 9 ATP6V1B1 ENSG00000116039 CDS Human protein_coding chr2:71185548 chr2:71185536 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_74597 0 0 0 1 71185533 71185556 mRNA hsa-miR-338-3p ATP6V1B1 miRanda miRanda
14034 chr20 17968818 17968818 1 + C A UCEC 17968837 + 17968817 17968857 41 TCTGTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT TATGTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT < 41bp 1 0.710917368847195 1 0.0024968683719635 experiment 0.57816526230561 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17968837 chr20:17968818 synonymous SNV . 0 hm6A_associated_SNPs_74623 0 0 1 2 17968809 17968818 mRNA hsa-miR-22 C20orf72 miRanda miRanda
14034 chr20 17968818 17968818 1 + C A UCEC 17968837 + 17968817 17968857 41 TCTGTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT TATGTGTGATTGATTGGAAGACATCAGAGAAACCAAAGCCT < 41bp 1 0.710917368847195 1 0.0024968683719635 experiment 0.57816526230561 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17968837 chr20:17968818 synonymous SNV . 0 hm6A_associated_SNPs_74623 0 0 1 2 17968809 17968826 mRNA hsa-miR-377 C20orf72 miRanda miRanda
14034 chr15 91483617 91483617 1 + C T UCEC 91483630 + 91483610 91483650 41 GCTCTTGCAACGTTTACTGGACATGGGAGAGACTGACCTCA GCTCTTGTAACGTTTACTGGACATGGGAGAGACTGACCTCA < 41bp 1 0.728479019413987 1 0.741736233234406 experiment 0.543041961172026 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 UNC45A ENSG00000140553 CDS Human protein_coding chr15:91483630 chr15:91483617 stopgain 0.830 0 hm6A_associated_SNPs_74660 0 0 1 1 91483595 91483617 mRNA hsa-miR-335 UNC45A miRanda miRanda
14034 chr20 33513537 33513537 1 + C A UCEC 33513552 + 33513532 33513572 41 GATCACTGGCAGGATTGATGACATGCTCAATGTATCTGGTG GATCAATGGCAGGATTGATGACATGCTCAATGTATCTGGTG < 41bp 1 0.646348161848948 1 0.754673719406128 experiment 0.707303676302104 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33513552 chr20:33513537 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_74681 0 0 1 2 33513517 33513541 mRNA hsa-miR-199a-5p ACSS2 miRanda miRanda
14034 chr20 33513537 33513537 1 + C A UCEC 33513552 + 33513532 33513572 41 GATCACTGGCAGGATTGATGACATGCTCAATGTATCTGGTG GATCAATGGCAGGATTGATGACATGCTCAATGTATCTGGTG < 41bp 1 0.646348161848948 1 0.754673719406128 experiment 0.707303676302104 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 6 ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33513552 chr20:33513537 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_74681 0 0 1 2 33513517 33513541 mRNA hsa-miR-199b-5p ACSS2 miRanda miRanda
14034 chr3 179107920 179107920 1 + T G UCEC 179107908 + 179107888 179107928 41 TCAGTTGGAGAAAATACAAAACAATTCAAAGCTCTTAAGGT TCAGTTGGAGAAAATACAAAACAATTCAAAGCGCTTAAGGT < 41bp 1 0.709111022966014 1 0.725875794887543 experiment 0.581777954067973 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 33 MFN1 ENSG00000171109 CDS Human protein_coding chr3:179107908 chr3:179107920 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_74686 0 0 0 1 179107914 179107926 mRNA hsa-miR-590-5p MFN1 miRanda miRanda
14034 chr3 158541305 158541305 1 + C T UCEC 158541288 + 158541268 158541308 41 GTGGCATTTGTAGTTCCTGAACATCAGCTGGGAACTGCATA GTGGCATTTGTAGTTCCTGAACATCAGCTGGGAACTGTATA < 41bp 1 0.610671814883113 1 0.181190371513367 experiment 0.778656370233773 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 38 MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158541288 chr3:158541305 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_74694 0 0 0 1 158541301 158541314 mRNA hsa-miR-217 MFSD1 miRanda miRanda
14034 chr8 27634592 27634592 1 + C T UCEC 27634585 + 27634565 27634605 41 AGACTGTCAGTGAAAAAAAAACTTTTGCGACAAGGCAAGTG AGACTGTCAGTGAAAAAAAAACTTTTGTGACAAGGCAAGTG < 41bp 1 0.58703450676161 1 0.985590100288391 experiment 0.82593098647678 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634585 chr8:27634592 nonsynonymous SNV 0.078 0 hm6A_associated_SNPs_74728 0 0 0 2 27634590 27634610 mRNA hsa-miR-96 ESCO2 miRanda miRanda
14034 chr8 27634592 27634592 1 + C T UCEC 27634585 + 27634565 27634605 41 AGACTGTCAGTGAAAAAAAAACTTTTGCGACAAGGCAAGTG AGACTGTCAGTGAAAAAAAAACTTTTGTGACAAGGCAAGTG < 41bp 1 0.58703450676161 1 0.985590100288391 experiment 0.82593098647678 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 28 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634585 chr8:27634592 nonsynonymous SNV 0.078 0 hm6A_associated_SNPs_74728 0 0 0 2 27634590 27634610 mRNA hsa-miR-1271 ESCO2 miRanda miRanda
14034 chr19 58773291 58773291 1 + A G UCEC 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGGATG < 41bp 1 0.320401295869584 1 0.999638497829437 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773291 nonsynonymous SNV 0.003 3 hm6A_associated_SNPs_74742 0 0 1 2 58773279 58773300 mRNA hsa-miR-544 ZNF544 miRanda miRanda
14034 chr19 58773291 58773291 1 + A G UCEC 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGGATG < 41bp 1 0.320401295869584 1 0.999638497829437 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773291 nonsynonymous SNV 0.003 3 hm6A_associated_SNPs_74742 0 0 1 2 58773281 58773305 mRNA hsa-miR-876-5p ZNF544 miRanda miRanda
14034 chr8 32621851 32621851 1 + C A UCEC 32621831 + 32621811 32621851 41 TCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTC TCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTA < 41bp 1 0.792793495280115 1 0.999273061752319 experiment 0.414413009439769 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 41 NRG1 ENSG00000157168 CDS Human protein_coding chr8:32621831 chr8:32621851 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_74767 0 0 0 1 32621850 32621871 mRNA hsa-miR-876-5p NRG1 miRanda miRanda
14034 chr3 38565745 38565745 1 + G T UCEC 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAATAATGCAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.780853194693112 1 0.985248744487762 experiment 0.438293610613776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 6 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565745 nonsynonymous SNV 0.699 2 hm6A_associated_SNPs_74789 0 0 1 5 38565732 38565752 mRNA hsa-miR-33a EXOG miRanda miRanda
14034 chr3 38565745 38565745 1 + G T UCEC 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAATAATGCAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.780853194693112 1 0.985248744487762 experiment 0.438293610613776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 6 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565745 nonsynonymous SNV 0.699 2 hm6A_associated_SNPs_74789 0 0 1 5 38565732 38565754 mRNA hsa-miR-217 EXOG miRanda miRanda
14034 chr3 38565745 38565745 1 + G T UCEC 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAATAATGCAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.780853194693112 1 0.985248744487762 experiment 0.438293610613776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 6 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565745 nonsynonymous SNV 0.699 2 hm6A_associated_SNPs_74789 0 0 1 5 38565736 38565755 mRNA hsa-miR-544 EXOG miRanda miRanda
14034 chr3 38565745 38565745 1 + G T UCEC 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAATAATGCAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.780853194693112 1 0.985248744487762 experiment 0.438293610613776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 6 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565745 nonsynonymous SNV 0.699 2 hm6A_associated_SNPs_74789 0 0 1 5 38565733 38565752 mRNA hsa-miR-33b EXOG miRanda miRanda
14034 chr3 38565745 38565745 1 + G T UCEC 38565760 + 38565740 38565780 41 TTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAG TTGAATAATGCAGAGATTGAACCAGATGATTACTTTATGAG < 41bp 1 0.780853194693112 1 0.985248744487762 experiment 0.438293610613776 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 6 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565760 chr3:38565745 nonsynonymous SNV 0.699 2 hm6A_associated_SNPs_74789 0 0 1 5 38565737 38565758 mRNA hsa-miR-216b EXOG miRanda miRanda
14034 chr15 34522007 34522007 1 + C A UCEC 34521990 + 34521970 34522010 41 GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCCTGG GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCATGG < 41bp 1 0.750050084085551 1 0.182271033525467 experiment 0.499899831828899 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521990 chr15:34522007 nonsynonymous SNV 0.666 0 hm6A_associated_SNPs_74800 0 0 1 3 34522000 34522020 mRNA hsa-miR-376c TMEM85 miRanda miRanda
14034 chr15 34522007 34522007 1 + C A UCEC 34521990 + 34521970 34522010 41 GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCCTGG GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCATGG < 41bp 1 0.750050084085551 1 0.182271033525467 experiment 0.499899831828899 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521990 chr15:34522007 nonsynonymous SNV 0.666 0 hm6A_associated_SNPs_74800 0 0 1 3 34521997 34522022 mRNA hsa-miR-381 TMEM85 miRanda miRanda
14034 chr15 34522007 34522007 1 + C A UCEC 34521990 + 34521970 34522010 41 GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCCTGG GTGGAGGACTGCTTTTGTGAACATGAGAAAGCAGCGCATGG < 41bp 1 0.750050084085551 1 0.182271033525467 experiment 0.499899831828899 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 38 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521990 chr15:34522007 nonsynonymous SNV 0.666 0 hm6A_associated_SNPs_74800 0 0 1 3 34521997 34522022 mRNA hsa-miR-300 TMEM85 miRanda miRanda
14034 chr12 111064238 111064238 1 + G A UCEC 111064248 + 111064228 111064268 41 CCACCTCAAAGAGTATTTGAACTTGTTGACCAGATTAATCC CCACCTCAAAAAGTATTTGAACTTGTTGACCAGATTAATCC < 41bp 1 0.321308724713526 1 0.317653566598892 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111064248 chr12:111064238 nonsynonymous SNV 0.385 3 hm6A_associated_SNPs_74809 0 0 1 1 111064236 111064258 mRNA hsa-miR-505 TCTN1 miRanda miRanda
14034 chr12 111064238 111064238 1 + G A UCEC 111064256 + 111064236 111064276 41 AAGAGTATTTGAACTTGTTGACCAGATTAATCCATCTATTT AAAAGTATTTGAACTTGTTGACCAGATTAATCCATCTATTT < 41bp 1 0.172370789790993 1 0.0625194013118744 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111064256 chr12:111064238 nonsynonymous SNV 0.385 3 hm6A_associated_SNPs_74810 0 0 1 1 111064236 111064258 mRNA hsa-miR-505 TCTN1 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-let-7a XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-let-7b XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-let-7c XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-let-7d XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-let-7e XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-let-7f XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-miR-98 XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320385 41320407 mRNA hsa-miR-196a XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320387 41320408 mRNA hsa-let-7g XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320385 41320408 mRNA hsa-let-7i XPNPEP3 miRanda miRanda
14034 chr22 41320407 41320407 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTTGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.443619991109249 1 0.0027833878993988 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 4 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320407 synonymous SNV . 0 hm6A_associated_SNPs_74813 0 0 1 11 41320385 41320407 mRNA hsa-miR-196b XPNPEP3 miRanda miRanda
14034 chr12 57909064 57909064 1 + G T UCEC 57909079 + 57909059 57909099 41 CTGCAGTATCCTGCTGACAAACTTCCTGTGTACCTTACCAG CTGCATTATCCTGCTGACAAACTTCCTGTGTACCTTACCAG < 41bp 1 0.592540322540279 1 0.79982316493988 experiment 0.814919354919442 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 MARS ENSG00000166986 CDS Human protein_coding chr12:57909079 chr12:57909064 nonsynonymous SNV 0.827 0 hm6A_associated_SNPs_74835 0 0 1 2 57909054 57909075 mRNA hsa-miR-214 MARS miRanda miRanda
14034 chr12 57909064 57909064 1 + G T UCEC 57909079 + 57909059 57909099 41 CTGCAGTATCCTGCTGACAAACTTCCTGTGTACCTTACCAG CTGCATTATCCTGCTGACAAACTTCCTGTGTACCTTACCAG < 41bp 1 0.592540322540279 1 0.79982316493988 experiment 0.814919354919442 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 6 MARS ENSG00000166986 CDS Human protein_coding chr12:57909079 chr12:57909064 nonsynonymous SNV 0.827 0 hm6A_associated_SNPs_74835 0 0 1 2 57909061 57909083 mRNA hsa-miR-382 MARS miRanda miRanda
14034 chr6 26423386 26423386 1 + G A UCEC 26423383 + 26423363 26423403 41 AACCACCTTTGTGAGCAAAGACAGCAGGGGCAGCGTGGCCC AACCACCTTTGTGAGCAAAGACAACAGGGGCAGCGTGGCCC < 41bp 1 0.138862019356037 1 0.924628019332886 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 24 BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26423383 chr6:26423386 . . 0 hm6A_associated_SNPs_74839 0 0 0 1 26423370 26423391 mRNA hsa-miR-370 BTN2A3 miRanda miRanda
14034 chr12 3702307 3702307 1 + C A UCEC 3702303 + 3702283 3702323 41 GTAGACTTGGATTTTAAGGGACAGCTGTGTGAAACATCTGT GTAGACTTGGATTTTAAGGGACAGATGTGTGAAACATCTGT < 41bp 1 0.7164163420918 1 0.982804298400879 experiment 0.567167315816401 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 25 PRMT8 ENSG00000111218 CDS Human protein_coding chr12:3702303 chr12:3702307 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74855 0 0 0 1 3702294 3702315 mRNA hsa-miR-377 PRMT8 miRanda miRanda
14034 chrX 41205779 41205779 1 + A G UCEC 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACGTTTCAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.60921886517782 1 0.979110240936279 experiment 0.78156226964436 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205779 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_74878 0 0 1 3 41205772 41205792 mRNA hsa-miR-23a DDX3X miRanda miRanda
14034 chrX 41205779 41205779 1 + A G UCEC 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACGTTTCAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.60921886517782 1 0.979110240936279 experiment 0.78156226964436 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205779 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_74878 0 0 1 3 41205765 41205785 mRNA hsa-miR-203 DDX3X miRanda miRanda
14034 chrX 41205779 41205779 1 + A G UCEC 41205793 + 41205773 41205813 41 CTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTT CTGGACGTTTCAAATGTGAAACATGTTATCAATTTTGACTT < 41bp 1 0.60921886517782 1 0.979110240936279 experiment 0.78156226964436 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 7 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205793 chrX:41205779 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_74878 0 0 1 3 41205772 41205792 mRNA hsa-miR-23b DDX3X miRanda miRanda
14034 chr3 158402436 158402436 1 + G A UCEC 158402453 + 158402433 158402473 41 GCAGGAGAAGGTGCTCTTAAACAAGGTATGCTGGGTCCGGG GCAAGAGAAGGTGCTCTTAAACAAGGTATGCTGGGTCCGGG < 41bp 1 0.588213646664884 1 0.190498769283295 experiment 0.823572706670231 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 4 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158402453 chr3:158402436 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_74902 0 0 1 1 158402428 158402451 mRNA hsa-miR-506 GFM1 miRanda miRanda
14034 chr17 62529305 62529305 1 + G T UCEC 62529299 + 62529279 62529319 41 CAAGAAAGAATATGAACATAACAAGAGACTGGTATGTCAAG CAAGAAAGAATATGAACATAACAAGATACTGGTATGTCAAG < 41bp 1 0.53562540057617 1 0.368418157100677 experiment 0.92874919884766 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 27 CEP95 ENSG00000258890 CDS Human protein_coding chr17:62529299 chr17:62529305 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_74925 0 0 1 1 62529293 62529309 mRNA hsa-miR-431 CCDC45 miRanda miRanda
14034 chr16 89211713 89211713 1 + C T UCEC 89211732 + 89211712 89211752 41 CCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCT CTGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCT < 41bp 1 0.718644898672389 1 0.969756126403809 experiment 0.562710202655222 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 2 ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89211732 chr16:89211713 stopgain 0.218 0 hm6A_associated_SNPs_74934 0 0 1 1 89211693 89211715 mRNA hsa-miR-127-3p ACSF3 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975422 24975445 mRNA hsa-miR-15a SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975424 24975445 mRNA hsa-miR-16 SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975430 24975455 mRNA hsa-miR-96 SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975419 24975443 mRNA hsa-miR-214 SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975422 24975445 mRNA hsa-miR-15b SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975425 24975445 mRNA hsa-miR-195 SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975421 24975445 mRNA hsa-miR-424 SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975423 24975445 mRNA hsa-miR-497 SRRM1 miRanda miRanda
14034 chr1 24975437 24975437 1 + C A UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTCGAGAATTTATGGGAGAACTGTGGCCCATGCTGCTAAG < 41bp 1 0.563783042121328 1 0.843959927558899 experiment 0.872433915757344 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 31 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975437 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_74990 0 0 1 9 24975434 24975455 mRNA hsa-miR-1271 SRRM1 miRanda miRanda
14034 chr2 113260562 113260562 1 + C A UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAAACATATCAT < 41bp 1 0.281509418913064 1 0.889083623886108 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260562 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_75033 0 0 1 5 113260548 113260569 mRNA hsa-miR-190 TTL miRanda miRanda
14034 chr2 113260562 113260562 1 + C A UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAAACATATCAT < 41bp 1 0.281509418913064 1 0.889083623886108 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260562 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_75033 0 0 1 5 113260552 113260573 mRNA hsa-miR-433 TTL miRanda miRanda
14034 chr2 113260562 113260562 1 + C A UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAAACATATCAT < 41bp 1 0.281509418913064 1 0.889083623886108 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260562 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_75033 0 0 1 5 113260556 113260577 mRNA hsa-miR-505 TTL miRanda miRanda
14034 chr2 113260562 113260562 1 + C A UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAAACATATCAT < 41bp 1 0.281509418913064 1 0.889083623886108 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260562 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_75033 0 0 1 5 113260554 113260576 mRNA hsa-miR-421 TTL miRanda miRanda
14034 chr2 113260562 113260562 1 + C A UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAAACATATCAT < 41bp 1 0.281509418913064 1 0.889083623886108 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 33 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260562 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_75033 0 0 1 5 113260549 113260569 mRNA hsa-miR-190b TTL miRanda miRanda
14034 chr19 49518862 49518862 1 + G A UCEC 49518851 + 49518831 49518871 41 TACAGAAGTGCAGGTGGATGACATCAAGCGGGTCTACTCAC TACAGAAGTGCAGGTGGATGACATCAAGCGGATCTACTCAC < 41bp 1 0.417305231550723 1 0.972934126853943 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 32 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49518851 chr19:49518862 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_75034 0 0 1 1 49518848 49518869 mRNA hsa-miR-411 RUVBL2 miRanda miRanda
14034 chr1 145281406 145281406 1 + T C UCEC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAC < 41bp 1 0.0633003162773759 1 0.211540728807449 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 41 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281406 synonymous SNV . 0 hm6A_associated_SNPs_75061 0 0 1 1 145281387 145281409 mRNA hsa-miR-185 NOTCH2NL miRanda miRanda
14034 chr15 52179813 52179813 1 + C A UCEC 52179811 + 52179791 52179831 41 ATATTTATCCCCAAACAGAAACCTGTACAGACTTTTACAGA ATATTTATCCCCAAACAGAAACATGTACAGACTTTTACAGA < 41bp 1 0.504996278147122 1 0.983674347400665 experiment 0.990007443705755 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 23 TMOD3 ENSG00000138594 CDS Human protein_coding chr15:52179811 chr15:52179813 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_75064 0 0 1 1 52179801 52179822 mRNA hsa-miR-486-5p TMOD3 miRanda miRanda
14034 chr1 45808158 45808158 1 + C A UCEC 45808147 + 45808127 45808167 41 GCTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA GCTACACAATGGCCTTATAGACTTGGTGTTCATGTACCAGA < 41bp 1 0.530136565894689 1 0.469275087118149 experiment 0.939726868210623 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808147 chr1:45808158 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_75070 0 0 1 2 45808158 45808179 mRNA hsa-miR-153 TOE1 miRanda miRanda
14034 chr1 45808158 45808158 1 + C A UCEC 45808147 + 45808127 45808167 41 GCTACACAATGGCCTTATAGACTTGGTGTTCCTGTACCAGA GCTACACAATGGCCTTATAGACTTGGTGTTCATGTACCAGA < 41bp 1 0.530136565894689 1 0.469275087118149 experiment 0.939726868210623 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808147 chr1:45808158 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_75070 0 0 1 2 45808142 45808161 mRNA hsa-miR-873 TOE1 miRanda miRanda
14034 chr3 158369968 158369968 1 + C T UCEC 158369981 + 158369961 158370001 41 TGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCT TGTGTTGTCAATTCAGATGAACAGCTTGGTGAGATGTTTCT < 41bp 1 0.682574323426841 1 0.606914103031158 experiment 0.634851353146319 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 8 GFM1 ENSG00000168827 CDS Human protein_coding chr3:158369981 chr3:158369968 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_75173 0 0 1 1 158369948 158369972 mRNA hsa-miR-182 GFM1 miRanda miRanda
14034 chr19 1278917 1278917 1 + A C UCEC 1278932 + 1278912 1278952 41 ACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT ACCCGCGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT < 41bp 1 0.781752524464752 1 0.86870276927948 experiment 0.436494951070497 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278932 chr19:1278917 synonymous SNV . 0 hm6A_associated_SNPs_75207 0 0 1 2 1278905 1278926 mRNA hsa-miR-28-5p C19orf24 miRanda miRanda
14034 chr19 1278917 1278917 1 + A C UCEC 1278932 + 1278912 1278952 41 ACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT ACCCGCGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCT < 41bp 1 0.781752524464752 1 0.86870276927948 experiment 0.436494951070497 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278932 chr19:1278917 synonymous SNV . 0 hm6A_associated_SNPs_75207 0 0 1 2 1278904 1278926 mRNA hsa-miR-708 C19orf24 miRanda miRanda
14034 chr1 203276513 203276513 1 + C T UCEC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGCAAGAACCAAGTGTTGCTGGGCCGGA < 41bp 1 0.629254624341333 1 0.994920909404755 experiment 0.741490751317333 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276513 synonymous SNV . 0 hm6A_associated_SNPs_75268 0 0 1 6 203276500 203276518 mRNA hsa-miR-15a BTG2 miRanda miRanda
14034 chr1 203276513 203276513 1 + C T UCEC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGCAAGAACCAAGTGTTGCTGGGCCGGA < 41bp 1 0.629254624341333 1 0.994920909404755 experiment 0.741490751317333 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276513 synonymous SNV . 0 hm6A_associated_SNPs_75268 0 0 1 6 203276497 203276518 mRNA hsa-miR-16 BTG2 miRanda miRanda
14034 chr1 203276513 203276513 1 + C T UCEC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGCAAGAACCAAGTGTTGCTGGGCCGGA < 41bp 1 0.629254624341333 1 0.994920909404755 experiment 0.741490751317333 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276513 synonymous SNV . 0 hm6A_associated_SNPs_75268 0 0 1 6 203276500 203276518 mRNA hsa-miR-15b BTG2 miRanda miRanda
14034 chr1 203276513 203276513 1 + C T UCEC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGCAAGAACCAAGTGTTGCTGGGCCGGA < 41bp 1 0.629254624341333 1 0.994920909404755 experiment 0.741490751317333 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276513 synonymous SNV . 0 hm6A_associated_SNPs_75268 0 0 1 6 203276498 203276518 mRNA hsa-miR-195 BTG2 miRanda miRanda
14034 chr1 203276513 203276513 1 + C T UCEC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGCAAGAACCAAGTGTTGCTGGGCCGGA < 41bp 1 0.629254624341333 1 0.994920909404755 experiment 0.741490751317333 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276513 synonymous SNV . 0 hm6A_associated_SNPs_75268 0 0 1 6 203276498 203276518 mRNA hsa-miR-424 BTG2 miRanda miRanda
14034 chr1 203276513 203276513 1 + C T UCEC 203276505 + 203276485 203276525 41 TGGGCTCCTCACCTGCAAGAACCAAGTGCTGCTGGGCCGGA TGGGCTCCTCACCTGCAAGAACCAAGTGTTGCTGGGCCGGA < 41bp 1 0.629254624341333 1 0.994920909404755 experiment 0.741490751317333 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 29 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276505 chr1:203276513 synonymous SNV . 0 hm6A_associated_SNPs_75268 0 0 1 6 203276501 203276518 mRNA hsa-miR-497 BTG2 miRanda miRanda
14034 chr11 65271283 65271283 1 + A G UCEC 65271263 + 65271243 65271283 41 TGAGCGGAAGAACGAATGTAACTTTAAGGCAGGAAAGACAA TGAGCGGAAGAACGAATGTAACTTTAAGGCAGGAAAGACAG < 41bp 1 0.085108622036144 1 0.16727876663208 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 41 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271263 chr11:65271283 . . 0 hm6A_associated_SNPs_75273 0 0 1 1 65271270 65271291 lncRNA hsa-miR-3163 MALAT1 miRanda starBase2
14034 chr11 65271283 65271283 1 + A G UCEC 65271280 + 65271260 65271300 41 GTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAA GTAACTTTAAGGCAGGAAAGACAGATTTTATTCTTCATAAA < 41bp 1 0.1203467524168 1 0.142176926136017 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 24 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271280 chr11:65271283 . . 0 hm6A_associated_SNPs_75274 0 0 1 1 65271270 65271291 lncRNA hsa-miR-3163 MALAT1 miRanda starBase2
14034 chr12 6879138 6879138 1 + G T UCEC 6879123 + 6879103 6879143 41 CTGAGGAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAG CTGAGGAGGAAGAAGAAGAAACTGCCGAGGATGGATAGGAG < 41bp 1 0.400360695643125 1 0.989797651767731 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 36 PTMS ENSG00000159335 CDS Human protein_coding chr12:6879123 chr12:6879138 stopgain 1.000 0 hm6A_associated_SNPs_75277 0 0 1 1 6879132 6879155 mRNA hsa-miR-205 PTMS miRanda miRanda
14034 chr13 111885610 111885610 1 + G A UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATACAACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.457972990104525 1 0.82912802696228 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885610 synonymous SNV . 0 hm6A_associated_SNPs_75285 0 0 1 5 111885595 111885617 mRNA hsa-miR-34a ARHGEF7 miRanda miRanda
14034 chr13 111885610 111885610 1 + G A UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATACAACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.457972990104525 1 0.82912802696228 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885610 synonymous SNV . 0 hm6A_associated_SNPs_75285 0 0 1 5 111885596 111885619 mRNA hsa-miR-183 ARHGEF7 miRanda miRanda
14034 chr13 111885610 111885610 1 + G A UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATACAACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.457972990104525 1 0.82912802696228 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885610 synonymous SNV . 0 hm6A_associated_SNPs_75285 0 0 1 5 111885595 111885617 mRNA hsa-miR-34c-5p ARHGEF7 miRanda miRanda
14034 chr13 111885610 111885610 1 + G A UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATACAACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.457972990104525 1 0.82912802696228 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885610 synonymous SNV . 0 hm6A_associated_SNPs_75285 0 0 1 5 111885595 111885617 mRNA hsa-miR-449a ARHGEF7 miRanda miRanda
14034 chr13 111885610 111885610 1 + G A UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATACAACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.457972990104525 1 0.82912802696228 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 10 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885610 synonymous SNV . 0 hm6A_associated_SNPs_75285 0 0 1 5 111885595 111885617 mRNA hsa-miR-449b ARHGEF7 miRanda miRanda
14034 chr12 49919805 49919805 1 + C T UCEC 49919788 + 49919768 49919808 41 ACAAGGCCAAAAGTCCAATGACCCCATGAACCAAGGGCGGC ACAAGGCCAAAAGTCCAATGACCCCATGAACCAAGGGTGGC < 41bp 1 0.567532461730568 1 0.533048927783966 experiment 0.864935076538864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919788 chr12:49919805 nonsynonymous SNV 0.764 2 hm6A_associated_SNPs_75286 0 0 0 2 49919804 49919825 mRNA hsa-miR-551a SPATS2 miRanda miRanda
14034 chr12 49919805 49919805 1 + C T UCEC 49919788 + 49919768 49919808 41 ACAAGGCCAAAAGTCCAATGACCCCATGAACCAAGGGCGGC ACAAGGCCAAAAGTCCAATGACCCCATGAACCAAGGGTGGC < 41bp 1 0.567532461730568 1 0.533048927783966 experiment 0.864935076538864 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919788 chr12:49919805 nonsynonymous SNV 0.764 2 hm6A_associated_SNPs_75286 0 0 0 2 49919804 49919825 mRNA hsa-miR-551b SPATS2 miRanda miRanda
14034 chr12 49919805 49919805 1 + C T UCEC 49919797 + 49919777 49919817 41 AAAGTCCAATGACCCCATGAACCAAGGGCGGCATGACAGTA AAAGTCCAATGACCCCATGAACCAAGGGTGGCATGACAGTA < 41bp 1 0.779284555361858 1 0.696194112300873 experiment 0.441430889276284 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919797 chr12:49919805 nonsynonymous SNV 0.764 2 hm6A_associated_SNPs_75287 0 0 0 2 49919804 49919825 mRNA hsa-miR-551a SPATS2 miRanda miRanda
14034 chr12 49919805 49919805 1 + C T UCEC 49919797 + 49919777 49919817 41 AAAGTCCAATGACCCCATGAACCAAGGGCGGCATGACAGTA AAAGTCCAATGACCCCATGAACCAAGGGTGGCATGACAGTA < 41bp 1 0.779284555361858 1 0.696194112300873 experiment 0.441430889276284 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 29 SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49919797 chr12:49919805 nonsynonymous SNV 0.764 2 hm6A_associated_SNPs_75287 0 0 0 2 49919804 49919825 mRNA hsa-miR-551b SPATS2 miRanda miRanda
14034 chr4 44687989 44687989 1 + T A UCEC 44687994 + 44687974 44688014 41 AGATTTCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT AGATTTCTGCTAAACATGGAACAAATGTTGAGAGTGTTCTT < 41bp 1 0.734159976070898 1 0.00474086403846741 experiment 0.531680047858203 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44687994 chr4:44687989 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_75298 0 0 1 2 44687977 44687998 mRNA hsa-miR-375 GUF1 miRanda miRanda
14034 chr4 44687989 44687989 1 + T A UCEC 44687994 + 44687974 44688014 41 AGATTTCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTT AGATTTCTGCTAAACATGGAACAAATGTTGAGAGTGTTCTT < 41bp 1 0.734159976070898 1 0.00474086403846741 experiment 0.531680047858203 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44687994 chr4:44687989 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_75298 0 0 1 2 44687982 44688006 mRNA hsa-miR-505 GUF1 miRanda miRanda
14034 chrX 48759675 48759675 1 + G A UCEC 48759657 + 48759637 48759677 41 GGATCGAGAGCGTGGCTATGACAAGGTAGACAGAGAGAGAG GGATCGAGAGCGTGGCTATGACAAGGTAGACAGAGAGAAAG < 41bp 1 0.602987720165304 1 0.926473379135132 experiment 0.794024559669391 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 39 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759657 chrX:48759675 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75331 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759675 48759675 1 + G A UCEC 48759666 + 48759646 48759686 41 GCGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACA GCGTGGCTATGACAAGGTAGACAGAGAGAAAGAGCGAGACA < 41bp 1 0.488161563321214 1 0.968590438365936 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 30 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759666 chrX:48759675 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75332 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759675 48759675 1 + G A UCEC 48759684 + 48759664 48759704 41 AGACAGAGAGAGAGAGCGAGACAGGGAACGGGATCGGGACC AGACAGAGAGAAAGAGCGAGACAGGGAACGGGATCGGGACC < 41bp 1 0.401417973236885 1 0.986942231655121 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759684 chrX:48759675 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75333 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chr9 135555186 135555186 1 + C T UCEC 135555177 + 135555157 135555197 41 GTCTGATGAAGAGTATGATGACAGAACTGCACGGGTAGGTG GTCTGATGAAGAGTATGATGACAGAACTGTACGGGTAGGTG < 41bp 1 0.769451543946441 1 0.991925954818726 experiment 0.461096912107119 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135555177 chr9:135555186 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75399 0 0 1 2 135555165 135555189 mRNA hsa-miR-223 GTF3C4 miRanda miRanda
14034 chr9 135555186 135555186 1 + C T UCEC 135555177 + 135555157 135555197 41 GTCTGATGAAGAGTATGATGACAGAACTGCACGGGTAGGTG GTCTGATGAAGAGTATGATGACAGAACTGTACGGGTAGGTG < 41bp 1 0.769451543946441 1 0.991925954818726 experiment 0.461096912107119 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135555177 chr9:135555186 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75399 0 0 1 2 135555183 135555190 mRNA hsa-miR-876-5p GTF3C4 miRanda miRanda
14034 chr7 151052896 151052896 1 + C T UCEC 151052909 + 151052889 151052929 41 GTGAAAGCGATGGTGCTTGAACTAAAACAATCTGAAGAGGA GTGAAAGTGATGGTGCTTGAACTAAAACAATCTGAAGAGGA < 41bp 1 0.548583282441218 1 0.62472403049469 experiment 0.902833435117564 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052909 chr7:151052896 nonsynonymous SNV 0.925 0 hm6A_associated_SNPs_75401 0 0 1 3 151052885 151052906 mRNA hsa-miR-29a NUB1 miRanda miRanda
14034 chr7 151052896 151052896 1 + C T UCEC 151052909 + 151052889 151052929 41 GTGAAAGCGATGGTGCTTGAACTAAAACAATCTGAAGAGGA GTGAAAGTGATGGTGCTTGAACTAAAACAATCTGAAGAGGA < 41bp 1 0.548583282441218 1 0.62472403049469 experiment 0.902833435117564 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052909 chr7:151052896 nonsynonymous SNV 0.925 0 hm6A_associated_SNPs_75401 0 0 1 3 151052885 151052906 mRNA hsa-miR-29b NUB1 miRanda miRanda
14034 chr7 151052896 151052896 1 + C T UCEC 151052909 + 151052889 151052929 41 GTGAAAGCGATGGTGCTTGAACTAAAACAATCTGAAGAGGA GTGAAAGTGATGGTGCTTGAACTAAAACAATCTGAAGAGGA < 41bp 1 0.548583282441218 1 0.62472403049469 experiment 0.902833435117564 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052909 chr7:151052896 nonsynonymous SNV 0.925 0 hm6A_associated_SNPs_75401 0 0 1 3 151052885 151052906 mRNA hsa-miR-29c NUB1 miRanda miRanda
14034 chr7 151052896 151052896 1 + C T UCEC 151052915 + 151052895 151052935 41 GCGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG GTGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG < 41bp 1 0.787643718236757 1 0.265599191188812 experiment 0.424712563526487 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052915 chr7:151052896 nonsynonymous SNV 0.925 0 hm6A_associated_SNPs_75402 0 0 1 3 151052885 151052906 mRNA hsa-miR-29a NUB1 miRanda miRanda
14034 chr7 151052896 151052896 1 + C T UCEC 151052915 + 151052895 151052935 41 GCGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG GTGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG < 41bp 1 0.787643718236757 1 0.265599191188812 experiment 0.424712563526487 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052915 chr7:151052896 nonsynonymous SNV 0.925 0 hm6A_associated_SNPs_75402 0 0 1 3 151052885 151052906 mRNA hsa-miR-29b NUB1 miRanda miRanda
14034 chr7 151052896 151052896 1 + C T UCEC 151052915 + 151052895 151052935 41 GCGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG GTGATGGTGCTTGAACTAAAACAATCTGAAGAGGACGCGAG < 41bp 1 0.787643718236757 1 0.265599191188812 experiment 0.424712563526487 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 2 NUB1 ENSG00000013374 CDS Human protein_coding chr7:151052915 chr7:151052896 nonsynonymous SNV 0.925 0 hm6A_associated_SNPs_75402 0 0 1 3 151052885 151052906 mRNA hsa-miR-29c NUB1 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGCACATCACGCGACT < 41bp 1 0.176512817263151 1 0.980309009552002 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502063 . . 0 hm6A_associated_SNPs_75446 0 0 0 5 151502056 151502079 mRNA hsa-miR-17 LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGCACATCACGCGACT < 41bp 1 0.176512817263151 1 0.980309009552002 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502063 . . 0 hm6A_associated_SNPs_75446 0 0 0 5 151502056 151502079 mRNA hsa-miR-20a LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGCACATCACGCGACT < 41bp 1 0.176512817263151 1 0.980309009552002 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502063 . . 0 hm6A_associated_SNPs_75446 0 0 0 5 151502056 151502079 mRNA hsa-miR-93 LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGCACATCACGCGACT < 41bp 1 0.176512817263151 1 0.980309009552002 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502063 . . 0 hm6A_associated_SNPs_75446 0 0 0 5 151502056 151502079 mRNA hsa-miR-106a LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502056 + 151502036 151502076 41 GACATCTTAAGAGATGATGGACTCATGTACATCACGCGACT GACATCTTAAGAGATGATGGACTCATGCACATCACGCGACT < 41bp 1 0.176512817263151 1 0.980309009552002 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502056 chr3:151502063 . . 0 hm6A_associated_SNPs_75446 0 0 0 5 151502056 151502079 mRNA hsa-miR-20b LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GCACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0719344554444911 1 0.95105242729187 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502063 . . 0 hm6A_associated_SNPs_75447 0 0 0 5 151502056 151502079 mRNA hsa-miR-17 LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GCACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0719344554444911 1 0.95105242729187 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502063 . . 0 hm6A_associated_SNPs_75447 0 0 0 5 151502056 151502079 mRNA hsa-miR-20a LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GCACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0719344554444911 1 0.95105242729187 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502063 . . 0 hm6A_associated_SNPs_75447 0 0 0 5 151502056 151502079 mRNA hsa-miR-93 LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GCACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0719344554444911 1 0.95105242729187 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502063 . . 0 hm6A_associated_SNPs_75447 0 0 0 5 151502056 151502079 mRNA hsa-miR-106a LOC201651 miRanda miRanda
14034 chr3 151502063 151502063 1 + T C UCEC 151502082 + 151502062 151502102 41 GTACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC GCACATCACGCGACTTTAGAACTCTGGAGTTCAAGTGACAC < 41bp 1 0.0719344554444911 1 0.95105242729187 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 2 AADACP1 ENSG00000240602 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:151502082 chr3:151502063 . . 0 hm6A_associated_SNPs_75447 0 0 0 5 151502056 151502079 mRNA hsa-miR-20b LOC201651 miRanda miRanda
14034 chr1 120285641 120285641 1 + A G UCEC 120285628 + 120285608 120285648 41 TGCCCCTGCTCCTATTCCGGACTCAGACCTCTGACCCTGCA TGCCCCTGCTCCTATTCCGGACTCAGACCTCTGGCCCTGCA < 41bp 1 0.626259406505289 1 0.882166266441345 experiment 0.747481186989422 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285628 chr1:120285641 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_75453 0 0 1 2 120285636 120285656 mRNA hsa-miR-103 PHGDH miRanda miRanda
14034 chr1 120285641 120285641 1 + A G UCEC 120285628 + 120285608 120285648 41 TGCCCCTGCTCCTATTCCGGACTCAGACCTCTGACCCTGCA TGCCCCTGCTCCTATTCCGGACTCAGACCTCTGGCCCTGCA < 41bp 1 0.626259406505289 1 0.882166266441345 experiment 0.747481186989422 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 34 PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285628 chr1:120285641 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_75453 0 0 1 2 120285636 120285656 mRNA hsa-miR-107 PHGDH miRanda miRanda
14034 chr1 120285641 120285641 1 + A G UCEC 120285634 + 120285614 120285654 41 TGCTCCTATTCCGGACTCAGACCTCTGACCCTGCAATGCTG TGCTCCTATTCCGGACTCAGACCTCTGGCCCTGCAATGCTG < 41bp 1 0.373658005315868 1 0.702373564243317 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285634 chr1:120285641 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_75454 0 0 1 2 120285636 120285656 mRNA hsa-miR-103 PHGDH miRanda miRanda
14034 chr1 120285641 120285641 1 + A G UCEC 120285634 + 120285614 120285654 41 TGCTCCTATTCCGGACTCAGACCTCTGACCCTGCAATGCTG TGCTCCTATTCCGGACTCAGACCTCTGGCCCTGCAATGCTG < 41bp 1 0.373658005315868 1 0.702373564243317 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 28 PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285634 chr1:120285641 nonsynonymous SNV 0.003 1 hm6A_associated_SNPs_75454 0 0 1 2 120285636 120285656 mRNA hsa-miR-107 PHGDH miRanda miRanda
14034 chr2 173429739 173429739 1 + C T UCEC 173429752 + 173429732 173429772 41 GGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCC GGAAGTCTATCTCATCGAAAACACATTGGAAGCATAAATCC < 41bp 1 0.645545911175788 1 0.580220103263855 experiment 0.708908177648424 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 8 PDK1 ENSG00000152256 CDS Human protein_coding chr2:173429752 chr2:173429739 nonsynonymous SNV 0.968 1 hm6A_associated_SNPs_75461 0 0 1 1 173429719 173429742 mRNA hsa-miR-135a PDK1 miRanda miRanda
14034 chr11 65270824 65270824 1 + G A UCEC 65270826 + 65270806 65270846 41 AGCCTTTTTAAAATTGTAGGACTTGTTCCTGTGGGCTTCAG AGCCTTTTTAAAATTGTAAGACTTGTTCCTGTGGGCTTCAG < 41bp 1 0.0652335553421118 1 0.446830451488495 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 19 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270826 chr11:65270824 . . 0 hm6A_associated_SNPs_75479 0 0 1 1 65270817 65270837 lncRNA hsa-miR-873-5p MALAT1 miRanda starBase2
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398479 398499 mRNA hsa-let-7a RBCK1 miRanda miRanda
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398479 398499 mRNA hsa-let-7b RBCK1 miRanda miRanda
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398479 398499 mRNA hsa-let-7c RBCK1 miRanda miRanda
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398478 398499 mRNA hsa-let-7d RBCK1 miRanda miRanda
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398479 398499 mRNA hsa-let-7e RBCK1 miRanda miRanda
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398479 398499 mRNA hsa-miR-98 RBCK1 miRanda miRanda
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398477 398499 mRNA hsa-let-7g RBCK1 miRanda miRanda
14034 chr20 398488 398488 1 + G A UCEC 398485 + 398465 398505 41 TGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTGC TGGGGTGCGGCAGAATGGGGACAATGCCTACCTCTATCTGC < 41bp 1 0.721817501154379 1 0.834898710250854 experiment 0.556364997691242 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 24 RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398485 chr20:398488 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_75498 0 0 1 8 398479 398499 mRNA hsa-let-7i RBCK1 miRanda miRanda
14034 chr15 25332833 25332833 1 + A G UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.28320952360945 1 0.42536336183548 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332833 . . 0 hm6A_associated_SNPs_75512 0 0 1 6 25332819 25332840 mRNA hsa-miR-1 SNORD116-21 miRanda miRanda
14034 chr15 25332833 25332833 1 + A G UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.28320952360945 1 0.42536336183548 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332833 . . 0 hm6A_associated_SNPs_75512 0 0 1 6 25332815 25332840 mRNA hsa-miR-206 SNORD116-21 miRanda miRanda
14034 chr15 25332833 25332833 1 + A G UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.28320952360945 1 0.42536336183548 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332833 . . 0 hm6A_associated_SNPs_75512 0 0 1 6 25332821 25332840 mRNA hsa-miR-613 SNORD116-21 miRanda miRanda
14034 chr15 25332833 25332833 1 + A G UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.28320952360945 1 0.42536336183548 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332833 . . 0 hm6A_associated_SNPs_75512 0 0 1 6 25332819 25332840 lncRNA hsa-miR-1-3p AC124312.3 miRanda starBase2
14034 chr15 25332833 25332833 1 + A G UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.28320952360945 1 0.42536336183548 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332833 . . 0 hm6A_associated_SNPs_75512 0 0 1 6 25332815 25332840 lncRNA hsa-miR-206 AC124312.3 miRanda starBase2
14034 chr15 25332833 25332833 1 + A G UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.28320952360945 1 0.42536336183548 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332833 . . 0 hm6A_associated_SNPs_75512 0 0 1 6 25332821 25332840 lncRNA hsa-miR-613 AC124312.3 miRanda starBase2
14034 chr14 22476211 22476211 1 + C A UCEC 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACACGTG < 41bp 1 0.0668838978893774 1 0.953927397727966 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 37 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476211 synonymous SNV . 0 hm6A_associated_SNPs_75519 0 0 0 2 22476205 22476225 mRNA hsa-miR-196a TRAV20 miRanda miRanda
14034 chr14 22476211 22476211 1 + C A UCEC 22476195 + 22476175 22476215 41 GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACCCGTG GAAGGAGGATGTGACCTTGGACTGTGTGTATGAAACACGTG < 41bp 1 0.0668838978893774 1 0.953927397727966 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 37 OR4E1;LINC02332 ENSG00000211799 CDS Human TR_V_gene chr14:22476195 chr14:22476211 synonymous SNV . 0 hm6A_associated_SNPs_75519 0 0 0 2 22476205 22476225 mRNA hsa-miR-196b TRAV20 miRanda miRanda
14034 chrX 41206957 41206957 1 + C A UCEC 41206941 + 41206921 41206961 41 TGGATATGGAGGAAATTATAACTCCCAGGGGGTTGACTGGT TGGATATGGAGGAAATTATAACTCCCAGGGGGTTGAATGGT < 41bp 1 0.656818650092893 1 0.789071679115295 experiment 0.686362699814214 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41206941 chrX:41206957 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_75522 0 0 1 1 41206950 41206976 mRNA hsa-miR-24 DDX3X miRanda miRanda
14034 chrX 41206957 41206957 1 + C A UCEC 41206956 + 41206936 41206976 41 TTATAACTCCCAGGGGGTTGACTGGTGGGGTAACTGAGCCT TTATAACTCCCAGGGGGTTGAATGGTGGGGTAACTGAGCCT Direct Loss 1 0.776109587545463 1 0.884870886802673 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41206956 chrX:41206957 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_75523 0 0 1 1 41206950 41206976 mRNA hsa-miR-24 DDX3X miRanda miRanda
14034 chr1 92786180 92786180 1 + G T UCEC 92786186 + 92786166 92786206 41 TTTCAACTGCTAAAGGAAGAACAAAGGTATGGTTGAATCAG TTTCAACTGCTAAATGAAGAACAAAGGTATGGTTGAATCAG < 41bp 1 0.547208236712584 1 0.132734805345535 experiment 0.905583526574833 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 15 RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92786186 chr1:92786180 nonsynonymous SNV 0.992 1 hm6A_associated_SNPs_75525 0 0 1 1 92786178 92786191 mRNA hsa-miR-328 RPAP2 miRanda miRanda
14034 chr1 225976966 225976966 1 + G A UCEC 225976957 + 225976937 225976977 41 GACAGTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTA GACAGTGTTTGGTGTATAAAACAGACCAAACTCAAGATGTA < 41bp 1 0.756580702684931 1 0.663722217082977 experiment 0.486838594630137 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 30 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976957 chr1:225976966 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_75557 0 0 1 2 225976945 225976966 mRNA hsa-miR-133a SRP9 miRanda miRanda
14034 chr1 225976966 225976966 1 + G A UCEC 225976957 + 225976937 225976977 41 GACAGTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTA GACAGTGTTTGGTGTATAAAACAGACCAAACTCAAGATGTA < 41bp 1 0.756580702684931 1 0.663722217082977 experiment 0.486838594630137 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 30 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976957 chr1:225976966 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_75557 0 0 1 2 225976945 225976966 mRNA hsa-miR-133b SRP9 miRanda miRanda
14034 chr1 169790866 169790866 1 + G A UCEC 169790850 + 169790830 169790870 41 ACTACAGATTATTTCAGAAAACACTCAAATTGTGTCGTTTT ACTACAGATTATTTCAGAAAACACTCAAATTGTGTCATTTT < 41bp 1 0.442261325931156 1 0.46932664513588 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 C1orf112 ENSG00000000460 CDS Human protein_coding chr1:169790850 chr1:169790866 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_75564 0 0 1 2 169790866 169790892 mRNA hsa-miR-19a C1orf112 miRanda miRanda
14034 chr1 169790866 169790866 1 + G A UCEC 169790850 + 169790830 169790870 41 ACTACAGATTATTTCAGAAAACACTCAAATTGTGTCGTTTT ACTACAGATTATTTCAGAAAACACTCAAATTGTGTCATTTT < 41bp 1 0.442261325931156 1 0.46932664513588 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 37 C1orf112 ENSG00000000460 CDS Human protein_coding chr1:169790850 chr1:169790866 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_75564 0 0 1 2 169790856 169790879 mRNA hsa-miR-182 C1orf112 miRanda miRanda
14034 chr6 31431872 31431872 1 + G C UCEC 31431853 + 31431833 31431873 41 ACCCTCCTTTAGAATCCAGGACCTTCTACCCTGCAGAGTGT ACCCTCCTTTAGAATCCAGGACCTTCTACCCTGCAGAGTCT < 41bp 1 0.296648292952724 1 0.549237370491028 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 HCP5 ENSG00000206337 ncRNA_exonic Human sense_overlapping chr6:31431853 chr6:31431872 . . 0 hm6A_associated_SNPs_75579 0 0 0 1 31431865 31431885 mRNA hsa-miR-150 HCP5 miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA TCATGTTGATAATTTCCAAGACAAAACATGCCATTTGACCA < 41bp 1 0.675472085042449 1 0.871545970439911 experiment 0.649055829915103 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75627 0 0 1 7 113260593 113260617 mRNA hsa-miR-34a TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA TCATGTTGATAATTTCCAAGACAAAACATGCCATTTGACCA < 41bp 1 0.675472085042449 1 0.871545970439911 experiment 0.649055829915103 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75627 0 0 1 7 113260584 113260609 mRNA hsa-miR-182 TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA TCATGTTGATAATTTCCAAGACAAAACATGCCATTTGACCA < 41bp 1 0.675472085042449 1 0.871545970439911 experiment 0.649055829915103 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75627 0 0 1 7 113260580 113260601 mRNA hsa-miR-183 TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA TCATGTTGATAATTTCCAAGACAAAACATGCCATTTGACCA < 41bp 1 0.675472085042449 1 0.871545970439911 experiment 0.649055829915103 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75627 0 0 1 7 113260590 113260611 mRNA hsa-miR-219-5p TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA TCATGTTGATAATTTCCAAGACAAAACATGCCATTTGACCA < 41bp 1 0.675472085042449 1 0.871545970439911 experiment 0.649055829915103 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75627 0 0 1 7 113260588 113260609 mRNA hsa-miR-133a TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA TCATGTTGATAATTTCCAAGACAAAACATGCCATTTGACCA < 41bp 1 0.675472085042449 1 0.871545970439911 experiment 0.649055829915103 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75627 0 0 1 7 113260593 113260617 mRNA hsa-miR-34c-5p TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA TCATGTTGATAATTTCCAAGACAAAACATGCCATTTGACCA < 41bp 1 0.675472085042449 1 0.871545970439911 experiment 0.649055829915103 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75627 0 0 1 7 113260588 113260609 mRNA hsa-miR-133b TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260604 + 113260584 113260624 41 AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAA AAGACAAAACATGCCATTTGACCAATCACTGCATTCAAAAA < 41bp 1 0.185101824076444 1 0.890030741691589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TTL ENSG00000114999 CDS Human protein_coding chr2:113260604 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75628 0 0 1 7 113260593 113260617 mRNA hsa-miR-34a TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260604 + 113260584 113260624 41 AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAA AAGACAAAACATGCCATTTGACCAATCACTGCATTCAAAAA < 41bp 1 0.185101824076444 1 0.890030741691589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TTL ENSG00000114999 CDS Human protein_coding chr2:113260604 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75628 0 0 1 7 113260584 113260609 mRNA hsa-miR-182 TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260604 + 113260584 113260624 41 AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAA AAGACAAAACATGCCATTTGACCAATCACTGCATTCAAAAA < 41bp 1 0.185101824076444 1 0.890030741691589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TTL ENSG00000114999 CDS Human protein_coding chr2:113260604 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75628 0 0 1 7 113260580 113260601 mRNA hsa-miR-183 TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260604 + 113260584 113260624 41 AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAA AAGACAAAACATGCCATTTGACCAATCACTGCATTCAAAAA < 41bp 1 0.185101824076444 1 0.890030741691589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TTL ENSG00000114999 CDS Human protein_coding chr2:113260604 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75628 0 0 1 7 113260590 113260611 mRNA hsa-miR-219-5p TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260604 + 113260584 113260624 41 AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAA AAGACAAAACATGCCATTTGACCAATCACTGCATTCAAAAA < 41bp 1 0.185101824076444 1 0.890030741691589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TTL ENSG00000114999 CDS Human protein_coding chr2:113260604 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75628 0 0 1 7 113260588 113260609 mRNA hsa-miR-133a TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260604 + 113260584 113260624 41 AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAA AAGACAAAACATGCCATTTGACCAATCACTGCATTCAAAAA < 41bp 1 0.185101824076444 1 0.890030741691589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TTL ENSG00000114999 CDS Human protein_coding chr2:113260604 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75628 0 0 1 7 113260593 113260617 mRNA hsa-miR-34c-5p TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260604 + 113260584 113260624 41 AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAA AAGACAAAACATGCCATTTGACCAATCACTGCATTCAAAAA < 41bp 1 0.185101824076444 1 0.890030741691589 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 11 TTL ENSG00000114999 CDS Human protein_coding chr2:113260604 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_75628 0 0 1 7 113260588 113260609 mRNA hsa-miR-133b TTL miRanda miRanda
14034 chr8 134239903 134239903 1 + A T UCEC 134239901 + 134239881 134239921 41 GAGCTGTAGGAATCCCAATGACATCTTTGCTGACTTGGAAT GAGCTGTAGGAATCCCAATGACTTCTTTGCTGACTTGGAAT < 41bp 1 0.7027534732461 1 0.744939982891083 experiment 0.5944930535078 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 23 WISP1 ENSG00000104415 CDS Human protein_coding chr8:134239901 chr8:134239903 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_75633 0 0 0 2 134239894 134239916 mRNA hsa-miR-195 WISP1 miRanda miRanda
14034 chr8 134239903 134239903 1 + A T UCEC 134239901 + 134239881 134239921 41 GAGCTGTAGGAATCCCAATGACATCTTTGCTGACTTGGAAT GAGCTGTAGGAATCCCAATGACTTCTTTGCTGACTTGGAAT < 41bp 1 0.7027534732461 1 0.744939982891083 experiment 0.5944930535078 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 23 WISP1 ENSG00000104415 CDS Human protein_coding chr8:134239901 chr8:134239903 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_75633 0 0 0 2 134239894 134239916 mRNA hsa-miR-424 WISP1 miRanda miRanda
14034 chr17 58734082 58734082 1 + C G UCEC 58734081 + 58734061 58734101 41 CTGCATCTCTCCAGAAGTGGACAATCAGGGAAACTTTACCA CTGCATCTCTCCAGAAGTGGAGAATCAGGGAAACTTTACCA Direct Loss 1 0.798794508788325 1 0.918307602405548 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58734081 chr17:58734082 nonsynonymous SNV 0.961 0 hm6A_associated_SNPs_75657 0 0 1 1 58734067 58734087 mRNA hsa-miR-219-5p PPM1D miRanda miRanda
14034 chr16 58036468 58036468 1 + G T UCEC 58036482 + 58036462 58036502 41 CCTGAAGATGACAGCACAAAACACGGGGGACGGGTGCGCAC CCTGAATATGACAGCACAAAACACGGGGGACGGGTGCGCAC < 41bp 1 0.728970354958441 1 0.121665716171265 experiment 0.542059290083118 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 USB1 ENSG00000103005 CDS Human protein_coding chr16:58036482 chr16:58036468 nonsynonymous SNV 0.990 4 hm6A_associated_SNPs_75730 0 0 1 1 58036459 58036480 mRNA hsa-miR-218 C16orf57 miRanda miRanda
14034 chr17 9745833 9745833 1 + G T UCEC 9745853 + 9745833 9745873 41 GACACTGCTTGGCTCAGGGGACTTGGCAGACGATAGAGAAC TACACTGCTTGGCTCAGGGGACTTGGCAGACGATAGAGAAC < 41bp 1 0.20073824259604 1 0.943366885185242 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 GLP2R ENSG00000065325 CDS Human protein_coding chr17:9745853 chr17:9745833 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_75771 0 0 0 2 9745832 9745852 mRNA hsa-miR-125b GLP2R miRanda miRanda
14034 chr17 9745833 9745833 1 + G T UCEC 9745853 + 9745833 9745873 41 GACACTGCTTGGCTCAGGGGACTTGGCAGACGATAGAGAAC TACACTGCTTGGCTCAGGGGACTTGGCAGACGATAGAGAAC < 41bp 1 0.20073824259604 1 0.943366885185242 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 GLP2R ENSG00000065325 CDS Human protein_coding chr17:9745853 chr17:9745833 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_75771 0 0 0 2 9745829 9745852 mRNA hsa-miR-125a-5p GLP2R miRanda miRanda
14034 chr7 86813900 86813900 1 + T C UCEC 86813888 + 86813868 86813908 41 CTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAATG CTCAACTACCTGAATTGGAAACAGAGTGGGGGCACTGAATG < 41bp 1 0.636359099847815 1 0.958369433879852 experiment 0.72728180030437 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86813888 chr7:86813900 synonymous SNV . 0 hm6A_associated_SNPs_75772 0 0 1 2 86813893 86813915 mRNA hsa-miR-133a DMTF1 miRanda miRanda
14034 chr7 86813900 86813900 1 + T C UCEC 86813888 + 86813868 86813908 41 CTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAATG CTCAACTACCTGAATTGGAAACAGAGTGGGGGCACTGAATG < 41bp 1 0.636359099847815 1 0.958369433879852 experiment 0.72728180030437 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 33 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86813888 chr7:86813900 synonymous SNV . 0 hm6A_associated_SNPs_75772 0 0 1 2 86813893 86813915 mRNA hsa-miR-133b DMTF1 miRanda miRanda
14034 chr4 185599482 185599482 1 + C A UCEC 185599470 + 185599450 185599490 41 TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGT TTTGGAGGTTACTGAAGATAACAAATTTTTTCATATACAGT < 41bp 1 0.602169338674892 1 0.0353072881698608 experiment 0.795661322650216 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 33 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185599470 chr4:185599482 nonsynonymous SNV 0.405 1 hm6A_associated_SNPs_75810 0 0 1 1 185599473 185599494 mRNA hsa-miR-134 CCDC111 miRanda miRanda
14034 chr9 731228 731228 1 + C T UCEC 731212 + 731192 731232 41 CATGAAGAAGAAAGATGGTAACAAAGATTCAAATGGCGCAA CATGAAGAAGAAAGATGGTAACAAAGATTCAAATGGTGCAA < 41bp 1 0.692982720251885 1 0.908249020576477 experiment 0.614034559496229 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 37 KANK1 ENSG00000107104 CDS Human protein_coding chr9:731212 chr9:731228 synonymous SNV . 0 hm6A_associated_SNPs_75847 0 0 0 1 731213 731236 mRNA hsa-miR-129-5p KANK1 miRanda miRanda
14034 chr2 44457736 44457736 1 + A G UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAGCAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA < 41bp 1 0.174098270078861 1 0.94187867641449 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 6 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457736 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_75850 0 0 1 1 44457728 44457749 mRNA hsa-miR-338-3p PPM1B miRanda miRanda
14034 chr6 10626718 10626718 1 + C A UCEC 10626728 + 10626708 10626748 41 TTCACCAAGCCTGTTTGCTAACAAGTTTGAGCTTAATACCT TTCACCAAGCATGTTTGCTAACAAGTTTGAGCTTAATACCT < 41bp 1 0.736701027899755 1 0.696375846862793 experiment 0.526597944200489 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 11 GCNT2 ENSG00000111846 CDS Human protein_coding chr6:10626728 chr6:10626718 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_75859 0 0 0 1 10626696 10626718 mRNA hsa-miR-138 GCNT2 miRanda miRanda
14034 chr15 25327974 25327974 1 + C T UCEC 25327958 + 25327938 25327978 41 TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TGCATTCCTTGGAAAGCTGAACAAAATGAGTGAAAATTCTA < 41bp 1 0.0787624187901244 1 0.0978323221206665 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 37 SNORD116-16 ENSG00000207263 ncRNA_exonic Human snoRNA chr15:25327958 chr15:25327974 . . 0 hm6A_associated_SNPs_75875 0 0 0 1 25327966 25327986 mRNA hsa-miR-202 SNORD116-16 miRanda miRanda
14034 chr8 15519757 15519757 1 + C G UCEC 15519756 + 15519736 15519776 41 TTTGCTTTATTTGAGAAGGAACAACTTGGAGTTCATCTATA TTTGCTTTATTTGAGAAGGAAGAACTTGGAGTTCATCTATA Direct Loss 1 0.436178970006269 1 0.514689326286316 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519756 chr8:15519757 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75888 0 0 1 2 15519739 15519760 mRNA hsa-miR-375 TUSC3 miRanda miRanda
14034 chr8 15519757 15519757 1 + C G UCEC 15519756 + 15519736 15519776 41 TTTGCTTTATTTGAGAAGGAACAACTTGGAGTTCATCTATA TTTGCTTTATTTGAGAAGGAAGAACTTGGAGTTCATCTATA Direct Loss 1 0.436178970006269 1 0.514689326286316 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519756 chr8:15519757 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75888 0 0 1 2 15519742 15519763 mRNA hsa-miR-382 TUSC3 miRanda miRanda
14034 chr8 15519757 15519757 1 + C G UCEC 15519777 + 15519757 15519797 41 CAACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG GAACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG < 41bp 1 0.451251234909278 1 0.288303405046463 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519777 chr8:15519757 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75889 0 0 1 2 15519739 15519760 mRNA hsa-miR-375 TUSC3 miRanda miRanda
14034 chr8 15519757 15519757 1 + C G UCEC 15519777 + 15519757 15519797 41 CAACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG GAACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGG < 41bp 1 0.451251234909278 1 0.288303405046463 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519777 chr8:15519757 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_75889 0 0 1 2 15519742 15519763 mRNA hsa-miR-382 TUSC3 miRanda miRanda
14034 chr18 12311006 12311006 1 + G A UCEC 12310996 + 12310976 12311016 41 CTTAGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT CTTAGAGCCAGGCACCATGGACAGCGTGCGATCTGGGCCTT < 41bp 1 0.731082503343193 1 0.85719108581543 experiment 0.537834993313614 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310996 chr18:12311006 synonymous SNV . 0 hm6A_associated_SNPs_75929 0 0 1 4 12311006 12311029 mRNA hsa-miR-17 TUBB6 miRanda miRanda
14034 chr18 12311006 12311006 1 + G A UCEC 12310996 + 12310976 12311016 41 CTTAGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT CTTAGAGCCAGGCACCATGGACAGCGTGCGATCTGGGCCTT < 41bp 1 0.731082503343193 1 0.85719108581543 experiment 0.537834993313614 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310996 chr18:12311006 synonymous SNV . 0 hm6A_associated_SNPs_75929 0 0 1 4 12311006 12311029 mRNA hsa-miR-20a TUBB6 miRanda miRanda
14034 chr18 12311006 12311006 1 + G A UCEC 12310996 + 12310976 12311016 41 CTTAGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT CTTAGAGCCAGGCACCATGGACAGCGTGCGATCTGGGCCTT < 41bp 1 0.731082503343193 1 0.85719108581543 experiment 0.537834993313614 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310996 chr18:12311006 synonymous SNV . 0 hm6A_associated_SNPs_75929 0 0 1 4 12311006 12311029 mRNA hsa-miR-106a TUBB6 miRanda miRanda
14034 chr18 12311006 12311006 1 + G A UCEC 12310996 + 12310976 12311016 41 CTTAGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT CTTAGAGCCAGGCACCATGGACAGCGTGCGATCTGGGCCTT < 41bp 1 0.731082503343193 1 0.85719108581543 experiment 0.537834993313614 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310996 chr18:12311006 synonymous SNV . 0 hm6A_associated_SNPs_75929 0 0 1 4 12311006 12311029 mRNA hsa-miR-20b TUBB6 miRanda miRanda
14034 chr6 43039065 43039065 1 + A C UCEC 43039055 + 43039035 43039075 41 GCAAATATGCTGAGGCTGAGACACTATACAAAGAGATCCTG GCAAATATGCTGAGGCTGAGACACTATACACAGAGATCCTG < 41bp 1 0.730564975168627 1 0.00262150168418884 experiment 0.538870049662746 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 31 KLC4 ENSG00000137171 CDS Human protein_coding chr6:43039055 chr6:43039065 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_75935 0 0 1 1 43039065 43039088 mRNA hsa-miR-183 KLC4 miRanda miRanda
14034 chr12 88554523 88554523 1 + C A UCEC 88554534 + 88554514 88554554 41 TTCCATTTTCTATGCTGCAGACACTAGTAAAACTCATTGTC TTCCATTTTATATGCTGCAGACACTAGTAAAACTCATTGTC < 41bp 1 0.613660422231121 1 0.116449236869812 experiment 0.772679155537757 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88554534 chr12:88554523 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_75950 0 0 1 2 88554510 88554532 mRNA hsa-miR-103 TMTC3 miRanda miRanda
14034 chr12 88554523 88554523 1 + C A UCEC 88554534 + 88554514 88554554 41 TTCCATTTTCTATGCTGCAGACACTAGTAAAACTCATTGTC TTCCATTTTATATGCTGCAGACACTAGTAAAACTCATTGTC < 41bp 1 0.613660422231121 1 0.116449236869812 experiment 0.772679155537757 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 10 TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88554534 chr12:88554523 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_75950 0 0 1 2 88554510 88554532 mRNA hsa-miR-107 TMTC3 miRanda miRanda
14034 chr7 112112370 112112370 1 + G A UCEC 112112356 + 112112336 112112376 41 GGTAAAAAAACACACCTATGACACCTTTAAGGAGGTTCTTG GGTAAAAAAACACACCTATGACACCTTTAAGGAGATTCTTG < 41bp 1 0.706819578447642 1 0.374936521053314 experiment 0.586360843104716 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112112356 chr7:112112370 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_75964 0 0 1 3 112112369 112112392 mRNA hsa-miR-217 IFRD1 miRanda miRanda
14034 chr7 112112370 112112370 1 + G A UCEC 112112356 + 112112336 112112376 41 GGTAAAAAAACACACCTATGACACCTTTAAGGAGGTTCTTG GGTAAAAAAACACACCTATGACACCTTTAAGGAGATTCTTG < 41bp 1 0.706819578447642 1 0.374936521053314 experiment 0.586360843104716 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112112356 chr7:112112370 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_75964 0 0 1 3 112112367 112112389 mRNA hsa-miR-324-5p IFRD1 miRanda miRanda
14034 chr7 112112370 112112370 1 + G A UCEC 112112356 + 112112336 112112376 41 GGTAAAAAAACACACCTATGACACCTTTAAGGAGGTTCTTG GGTAAAAAAACACACCTATGACACCTTTAAGGAGATTCTTG < 41bp 1 0.706819578447642 1 0.374936521053314 experiment 0.586360843104716 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 35 IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112112356 chr7:112112370 nonsynonymous SNV 0.974 0 hm6A_associated_SNPs_75964 0 0 1 3 112112364 112112385 mRNA hsa-miR-339-5p IFRD1 miRanda miRanda
14034 chr19 7626096 7626096 1 + G A UCEC 7626114 + 7626094 7626134 41 GAGAGGAGTCAGATTGTCTGACAGAGTATGAGGAGGACGCC GAAAGGAGTCAGATTGTCTGACAGAGTATGAGGAGGACGCC < 41bp 1 0.478232496308559 1 0.307326674461365 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7626114 chr19:7626096 nonsynonymous SNV 0.929 1 hm6A_associated_SNPs_75991 0 0 1 1 7626096 7626116 mRNA hsa-miR-505 PNPLA6 miRanda miRanda
14034 chr11 65270834 65270834 1 + C T UCEC 65270826 + 65270806 65270846 41 AGCCTTTTTAAAATTGTAGGACTTGTTCCTGTGGGCTTCAG AGCCTTTTTAAAATTGTAGGACTTGTTCTTGTGGGCTTCAG < 41bp 1 0.0843414032487444 1 0.542473495006561 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 29 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270826 chr11:65270834 . . 0 hm6A_associated_SNPs_75993 0 0 1 1 65270817 65270837 lncRNA hsa-miR-873-5p MALAT1 miRanda starBase2
14034 chr14 66208875 66208875 1 + C A UCEC 66208884 + 66208864 66208904 41 AAACTTCCATTCTTTAGATGACATCTACTATTTTGGGGGCC AAACTTCCATTATTTAGATGACATCTACTATTTTGGGGGCC < 41bp 1 0.798692307057977 1 0.157989889383316 experiment 0.402615385884046 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 FUT8 ENSG00000033170 CDS Human protein_coding chr14:66208884 chr14:66208875 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76061 0 0 1 1 66208858 66208879 mRNA hsa-miR-186 FUT8 miRanda miRanda
14034 chr1 93299177 93299177 1 + G T UCEC 93299194 + 93299174 93299214 41 ACAGGATGATAGTTCGTGTGACAAACAGAGATATCATTTGT ACATGATGATAGTTCGTGTGACAAACAGAGATATCATTTGT < 41bp 1 0.6376489726522 1 0.173296481370926 experiment 0.7247020546956 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299194 chr1:93299177 nonsynonymous SNV 0.996 5 hm6A_associated_SNPs_76126 0 0 1 2 93299172 93299195 mRNA hsa-miR-377 RPL5 miRanda miRanda
14034 chr1 93299177 93299177 1 + G T UCEC 93299194 + 93299174 93299214 41 ACAGGATGATAGTTCGTGTGACAAACAGAGATATCATTTGT ACATGATGATAGTTCGTGTGACAAACAGAGATATCATTTGT < 41bp 1 0.6376489726522 1 0.173296481370926 experiment 0.7247020546956 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control 4 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299194 chr1:93299177 nonsynonymous SNV 0.996 5 hm6A_associated_SNPs_76126 0 0 1 2 93299158 93299179 mRNA hsa-miR-486-5p RPL5 miRanda miRanda
14034 chr13 31850875 31850875 1 + G A UCEC 31850881 + 31850861 31850901 41 ATATTTTTGTTGCAGTAAAAACATGCAAGAAATTTCATGGT ATATTTTTGTTGCAATAAAAACATGCAAGAAATTTCATGGT < 41bp 1 0.517191179237944 1 0.758296728134155 experiment 0.965617641524111 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31850881 chr13:31850875 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76128 0 0 0 1 31850866 31850892 mRNA hsa-miR-544 B3GALTL miRanda miRanda
14034 chr21 37445098 37445098 1 + C A UCEC 37445094 + 37445074 37445114 41 GCCCAGAAGAAGGTGCAGAGACCCCTGTGTACTTGGCCCTT GCCCAGAAGAAGGTGCAGAGACCCATGTGTACTTGGCCCTT < 41bp 1 0.72987574508141 1 0.861024975776672 experiment 0.540248509837179 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 25 CBR1 ENSG00000159228 CDS Human protein_coding chr21:37445094 chr21:37445098 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_76140 0 0 1 1 37445088 37445108 mRNA hsa-miR-224 CBR1 miRanda miRanda
14034 chr6 33383605 33383605 1 + C T UCEC 33383622 + 33383602 33383642 41 TCACATTGGTTTCCCCACAGACATCCCTAAAAGTGCCCCCC TCATATTGGTTTCCCCACAGACATCCCTAAAAGTGCCCCCC < 41bp 1 0.782465652644909 1 0.0237812101840973 experiment 0.435068694710181 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 4 PHF1 ENSG00000112511 CDS Human protein_coding chr6:33383622 chr6:33383605 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_76149 0 0 1 1 33383599 33383620 mRNA hsa-miR-491-5p PHF1 miRanda miRanda
14034 chr22 41320419 41320419 1 + C T UCEC 41320424 + 41320404 41320444 41 CCTCGGGATGGATGTCCATGACACTCCAGACATGCCCCGTT CCTCGGGATGGATGTTCATGACACTCCAGACATGCCCCGTT < 41bp 1 0.477217027547566 1 0.00531774759292603 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 16 XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41320424 chr22:41320419 synonymous SNV . 0 hm6A_associated_SNPs_76157 0 0 1 1 41320412 41320431 mRNA hsa-miR-122 XPNPEP3 miRanda miRanda
14034 chr8 95877791 95877791 1 + C T UCEC 95877804 + 95877784 95877824 41 AAGTAGACGGACTGCCAAAGACCTTTGGGAAGTTGTTGTTC AAGTAGATGGACTGCCAAAGACCTTTGGGAAGTTGTTGTTC < 41bp 1 0.306272378837418 1 0.980809688568115 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 8 INTS8 ENSG00000164941 CDS Human protein_coding chr8:95877804 chr8:95877791 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_76175 0 0 1 1 95877784 95877806 mRNA hsa-miR-431 INTS8 miRanda miRanda
14034 chr1 109321967 109321967 1 + C T UCEC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTTCTGCATGAACTGACCTTTCAGGCAATGGC < 41bp 1 0.371085384033142 1 0.559911906719208 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321967 synonymous SNV . 0 hm6A_associated_SNPs_76178 0 0 1 2 109321963 109321984 mRNA hsa-miR-196a STXBP3 miRanda miRanda
14034 chr1 109321967 109321967 1 + C T UCEC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTTCTGCATGAACTGACCTTTCAGGCAATGGC < 41bp 1 0.371085384033142 1 0.559911906719208 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321967 synonymous SNV . 0 hm6A_associated_SNPs_76178 0 0 1 2 109321961 109321982 mRNA hsa-miR-223 STXBP3 miRanda miRanda
14034 chr11 65269085 65269085 1 + A G UCEC 65269081 + 65269061 65269101 41 CAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGA CAGATGCTATAGTACTATTGACAAGCTGGGTTAGAGAAGGA < 41bp 1 0.209758724081937 1 0.855042934417725 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269081 chr11:65269085 . . 0 hm6A_associated_SNPs_76219 0 0 1 2 65269083 65269105 lncRNA hsa-miR-483-3p MALAT1 miRanda starBase2
14034 chr11 65269085 65269085 1 + A G UCEC 65269081 + 65269061 65269101 41 CAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGA CAGATGCTATAGTACTATTGACAAGCTGGGTTAGAGAAGGA < 41bp 1 0.209758724081937 1 0.855042934417725 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269081 chr11:65269085 . . 0 hm6A_associated_SNPs_76219 0 0 1 2 65269079 65269100 lncRNA hsa-miR-942-5p MALAT1 miRanda starBase2
14034 chr3 39450184 39450184 1 + T C UCEC 39450172 + 39450152 39450192 41 TGCAATTGTTGCCATTGAAAACCCTGCTGATGTCAGTGTTA TGCAATTGTTGCCATTGAAAACCCTGCTGATGCCAGTGTTA < 41bp 1 0.154458820735915 1 0.159041553735733 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450172 chr3:39450184 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_76233 0 0 1 4 39450166 39450189 mRNA hsa-miR-217 RPSA miRanda miRanda
14034 chr3 39450184 39450184 1 + T C UCEC 39450172 + 39450152 39450192 41 TGCAATTGTTGCCATTGAAAACCCTGCTGATGTCAGTGTTA TGCAATTGTTGCCATTGAAAACCCTGCTGATGCCAGTGTTA < 41bp 1 0.154458820735915 1 0.159041553735733 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450172 chr3:39450184 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_76233 0 0 1 4 39450169 39450192 mRNA hsa-miR-141 RPSA miRanda miRanda
14034 chr3 39450184 39450184 1 + T C UCEC 39450172 + 39450152 39450192 41 TGCAATTGTTGCCATTGAAAACCCTGCTGATGTCAGTGTTA TGCAATTGTTGCCATTGAAAACCCTGCTGATGCCAGTGTTA < 41bp 1 0.154458820735915 1 0.159041553735733 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450172 chr3:39450184 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_76233 0 0 1 4 39450169 39450192 mRNA hsa-miR-200a RPSA miRanda miRanda
14034 chr3 39450184 39450184 1 + T C UCEC 39450172 + 39450152 39450192 41 TGCAATTGTTGCCATTGAAAACCCTGCTGATGTCAGTGTTA TGCAATTGTTGCCATTGAAAACCCTGCTGATGCCAGTGTTA < 41bp 1 0.154458820735915 1 0.159041553735733 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 RPSA ENSG00000168028 CDS Human protein_coding chr3:39450172 chr3:39450184 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_76233 0 0 1 4 39450176 39450196 mRNA hsa-miR-410 RPSA miRanda miRanda
14034 chr1 52249968 52249968 1 + T C UCEC 52249964 + 52249944 52249984 41 TCATGTCTAGACTATGATGAACATTACATTCTCACATTCCC TCATGTCTAGACTATGATGAACATCACATTCTCACATTCCC < 41bp 1 0.320984999842626 1 0.00646498799324036 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52249964 chr1:52249968 nonsynonymous SNV 0.983 4 hm6A_associated_SNPs_76274 0 0 1 3 52249962 52249984 mRNA hsa-miR-1 OSBPL9 miRanda miRanda
14034 chr1 52249968 52249968 1 + T C UCEC 52249964 + 52249944 52249984 41 TCATGTCTAGACTATGATGAACATTACATTCTCACATTCCC TCATGTCTAGACTATGATGAACATCACATTCTCACATTCCC < 41bp 1 0.320984999842626 1 0.00646498799324036 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52249964 chr1:52249968 nonsynonymous SNV 0.983 4 hm6A_associated_SNPs_76274 0 0 1 3 52249962 52249984 mRNA hsa-miR-206 OSBPL9 miRanda miRanda
14034 chr1 52249968 52249968 1 + T C UCEC 52249964 + 52249944 52249984 41 TCATGTCTAGACTATGATGAACATTACATTCTCACATTCCC TCATGTCTAGACTATGATGAACATCACATTCTCACATTCCC < 41bp 1 0.320984999842626 1 0.00646498799324036 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 25 OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52249964 chr1:52249968 nonsynonymous SNV 0.983 4 hm6A_associated_SNPs_76274 0 0 1 3 52249965 52249984 mRNA hsa-miR-613 OSBPL9 miRanda miRanda
14034 chr3 39125732 39125732 1 + C A UCEC 39125740 + 39125720 39125760 41 GCCAAATTGGTTCTCAGTAGACTTAAAAACAGGGGTAAGTT GCCAAATTGGTTATCAGTAGACTTAAAAACAGGGGTAAGTT < 41bp 1 0.180642506803471 1 0.549042761325836 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 13 WDR48 ENSG00000114742 CDS Human protein_coding chr3:39125740 chr3:39125732 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76315 0 0 1 1 39125732 39125753 mRNA hsa-miR-339-5p WDR48 miRanda miRanda
14034 chr11 108139207 108139207 1 + C A UCEC 108139194 + 108139174 108139214 41 GCAAGATCTACTTTTCTTAGACATGCTCAAGTTCTTGTGTT GCAAGATCTACTTTTCTTAGACATGCTCAAGTTATTGTGTT < 41bp 1 0.712869079702173 1 0.0602535009384155 experiment 0.574261840595655 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 ATM ENSG00000149311 CDS Human protein_coding chr11:108139194 chr11:108139207 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_76355 0 0 1 3 108139201 108139222 mRNA hsa-miR-362-3p ATM miRanda miRanda
14034 chr11 108139207 108139207 1 + C A UCEC 108139194 + 108139174 108139214 41 GCAAGATCTACTTTTCTTAGACATGCTCAAGTTCTTGTGTT GCAAGATCTACTTTTCTTAGACATGCTCAAGTTATTGTGTT < 41bp 1 0.712869079702173 1 0.0602535009384155 experiment 0.574261840595655 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 ATM ENSG00000149311 CDS Human protein_coding chr11:108139194 chr11:108139207 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_76355 0 0 1 3 108139201 108139222 mRNA hsa-miR-377 ATM miRanda miRanda
14034 chr11 108139207 108139207 1 + C A UCEC 108139194 + 108139174 108139214 41 GCAAGATCTACTTTTCTTAGACATGCTCAAGTTCTTGTGTT GCAAGATCTACTTTTCTTAGACATGCTCAAGTTATTGTGTT < 41bp 1 0.712869079702173 1 0.0602535009384155 experiment 0.574261840595655 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 34 ATM ENSG00000149311 CDS Human protein_coding chr11:108139194 chr11:108139207 nonsynonymous SNV 0.960 1 hm6A_associated_SNPs_76355 0 0 1 3 108139201 108139222 mRNA hsa-miR-329 ATM miRanda miRanda
14034 chr11 35250853 35250853 1 + G T UCEC 35250846 + 35250826 35250866 41 GACAGCTGATGAGACAAGGAACCTGCAGAATGTGGACATGA GACAGCTGATGAGACAAGGAACCTGCATAATGTGGACATGA < 41bp 1 0.697078316129271 1 0.974878072738647 experiment 0.605843367741457 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 28 CD44 ENSG00000026508 CDS Human protein_coding chr11:35250846 chr11:35250853 nonsynonymous SNV 0.986 3 hm6A_associated_SNPs_76395 0 0 1 1 35250835 35250856 mRNA hsa-miR-544 CD44 miRanda miRanda
14034 chr6 133138113 133138113 1 + G T UCEC 133138106 + 133138086 133138126 41 TTTCTCCCAATAGGTTGATGACAACAAGAAACTAGGAGAAT TTTCTCCCAATAGGTTGATGACAACAATAAACTAGGAGAAT < 41bp 1 0.739226498305838 1 0.195441097021103 experiment 0.521547003388324 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138106 chr6:133138113 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_76398 0 0 1 1 133138104 133138124 mRNA hsa-miR-384 SNORA33 miRanda miRanda
14034 chr6 133138113 133138113 1 + G T UCEC 133138116 + 133138096 133138136 41 TAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGCCT TAGGTTGATGACAACAATAAACTAGGAGAATGGGTAGGCCT < 41bp 1 0.526390552988443 1 0.289325654506683 experiment 0.947218894023113 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 18 RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138116 chr6:133138113 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_76399 0 0 1 1 133138104 133138124 mRNA hsa-miR-384 SNORA33 miRanda miRanda
14034 chr11 65267888 65267888 1 + T G UCEC 65267906 + 65267886 65267926 41 GATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA GAGTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCA < 41bp 1 0.201022978187178 1 0.976813316345215 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 3 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267906 chr11:65267888 . . 0 hm6A_associated_SNPs_76410 0 0 1 1 65267882 65267905 lncRNA hsa-miR-384 MALAT1 miRanda starBase2
14034 chr8 124113236 124113236 1 + G T UCEC 124113230 + 124113210 124113250 41 TATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGGTA TATATTCAGTTCAGGCTTTAACACAATAAATAAATAAGGTA < 41bp 1 0.395494045579861 1 7.46548175811768e-05 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113230 chr8:124113236 stopgain 1.000 1 hm6A_associated_SNPs_76422 0 0 0 1 124113217 124113236 mRNA hsa-miR-599 WDR67 miRanda miRanda
14034 chr1 145281372 145281372 1 + A C UCEC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTACGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0824509290494522 1 0.410948842763901 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281372 nonsynonymous SNV 0.970 0 hm6A_associated_SNPs_76425 0 0 1 2 145281369 145281383 mRNA hsa-miR-96 NOTCH2NL miRanda miRanda
14034 chr1 145281372 145281372 1 + A C UCEC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTACGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT < 41bp 1 0.0824509290494522 1 0.410948842763901 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 7 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281372 nonsynonymous SNV 0.970 0 hm6A_associated_SNPs_76425 0 0 1 2 145281369 145281383 mRNA hsa-miR-1271 NOTCH2NL miRanda miRanda
14034 chr1 97278621 97278621 1 + C T UCEC 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTTGCTAACACTGGGGGCACTGTGAAAG < 41bp 1 0.619928550121757 1 0.967524886131287 experiment 0.760142899756486 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278621 synonymous SNV . 0 hm6A_associated_SNPs_76428 0 0 1 2 97278613 97278633 mRNA hsa-miR-199a-5p PTBP2 miRanda miRanda
14034 chr1 97278621 97278621 1 + C T UCEC 97278626 + 97278606 97278646 41 TCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAG TCTACGAACACTGTTTGCTAACACTGGGGGCACTGTGAAAG < 41bp 1 0.619928550121757 1 0.967524886131287 experiment 0.760142899756486 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97278626 chr1:97278621 synonymous SNV . 0 hm6A_associated_SNPs_76428 0 0 1 2 97278613 97278633 mRNA hsa-miR-199b-5p PTBP2 miRanda miRanda
14034 chr10 70513652 70513652 1 + T G UCEC 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATGTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA < 41bp 1 0.412265558235948 1 0.86856746673584 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513652 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76461 0 0 1 4 70513652 70513672 mRNA hsa-miR-224 CCAR1 miRanda miRanda
14034 chr10 70513652 70513652 1 + T G UCEC 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATGTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA < 41bp 1 0.412265558235948 1 0.86856746673584 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513652 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76461 0 0 1 4 70513637 70513658 mRNA hsa-miR-381 CCAR1 miRanda miRanda
14034 chr10 70513652 70513652 1 + T G UCEC 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATGTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA < 41bp 1 0.412265558235948 1 0.86856746673584 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513652 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76461 0 0 1 4 70513646 70513665 mRNA hsa-miR-202 CCAR1 miRanda miRanda
14034 chr10 70513652 70513652 1 + T G UCEC 70513668 + 70513648 70513688 41 AAATTTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA AAATGTGTATATACCTAGTGACTTTTTTGATGCTCAATTTA < 41bp 1 0.412265558235948 1 0.86856746673584 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513668 chr10:70513652 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76461 0 0 1 4 70513637 70513658 mRNA hsa-miR-300 CCAR1 miRanda miRanda
14034 chr10 76936271 76936271 1 + A C UCEC 76936276 + 76936256 76936296 41 GCTTTTTATATAACAACAAGACTCTTTTTGTACTACCATAC GCTTTTTATATAACACCAAGACTCTTTTTGTACTACCATAC < 41bp 1 0.737217497419585 1 0.934260129928589 experiment 0.525565005160831 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 16 SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76936276 chr10:76936271 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76479 0 0 1 2 76936267 76936294 mRNA hsa-miR-196a SAMD8 miRanda miRanda
14034 chr10 76936271 76936271 1 + A C UCEC 76936276 + 76936256 76936296 41 GCTTTTTATATAACAACAAGACTCTTTTTGTACTACCATAC GCTTTTTATATAACACCAAGACTCTTTTTGTACTACCATAC < 41bp 1 0.737217497419585 1 0.934260129928589 experiment 0.525565005160831 Functional Loss 24981863;GSE54365;m6A-seq with improved protocol;A549;Control 16 SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76936276 chr10:76936271 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_76479 0 0 1 2 76936258 76936278 mRNA hsa-miR-431 SAMD8 miRanda miRanda
14034 chr3 148885007 148885007 1 + G T UCEC 148885009 + 148884989 148885029 41 ATTCCATATGCTAATCATGAACTGAAAGAAGAGAACCGGGT ATTCCATATGCTAATCATTAACTGAAAGAAGAGAACCGGGT < 41bp 1 0.119848269507663 1 0.0536590814590454 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 HPS3 ENSG00000163755 CDS Human protein_coding chr3:148885009 chr3:148885007 stopgain 0.979 1 hm6A_associated_SNPs_76481 0 0 1 1 148884988 148885009 mRNA hsa-miR-433 HPS3 miRanda miRanda
14034 chr19 58773254 58773254 1 + C T UCEC 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG TGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG < 41bp 1 0.310969570671928 1 0.999147772789001 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773254 stopgain 0.125 0 hm6A_associated_SNPs_76484 0 0 1 2 58773248 58773268 mRNA hsa-miR-199a-5p ZNF544 miRanda miRanda
14034 chr19 58773254 58773254 1 + C T UCEC 58773274 + 58773254 58773294 41 CGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG TGAATTCACACTGGAGAAAAACCGTATCAGTGTATTGAATG < 41bp 1 0.310969570671928 1 0.999147772789001 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773274 chr19:58773254 stopgain 0.125 0 hm6A_associated_SNPs_76484 0 0 1 2 58773243 58773268 mRNA hsa-miR-199b-5p ZNF544 miRanda miRanda
14034 chr1 54681967 54681967 1 + C A UCEC 54681953 + 54681933 54681973 41 CAAGAATTTGGCCTGGGTGGACTCAGACCAGCTCCTCTATC CAAGAATTTGGCCTGGGTGGACTCAGACCAGCTCATCTATC < 41bp 1 0.511567606388356 1 0.962193965911865 experiment 0.976864787223287 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 35 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54681953 chr1:54681967 nonsynonymous SNV 0.942 4 hm6A_associated_SNPs_76535 0 0 1 2 54681945 54681969 mRNA hsa-miR-28-5p MRPL37 miRanda miRanda
14034 chr1 54681967 54681967 1 + C A UCEC 54681953 + 54681933 54681973 41 CAAGAATTTGGCCTGGGTGGACTCAGACCAGCTCCTCTATC CAAGAATTTGGCCTGGGTGGACTCAGACCAGCTCATCTATC < 41bp 1 0.511567606388356 1 0.962193965911865 experiment 0.976864787223287 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 35 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54681953 chr1:54681967 nonsynonymous SNV 0.942 4 hm6A_associated_SNPs_76535 0 0 1 2 54681947 54681969 mRNA hsa-miR-708 MRPL37 miRanda miRanda
14034 chr1 54681967 54681967 1 + C A UCEC 54681959 + 54681939 54681979 41 TTTGGCCTGGGTGGACTCAGACCAGCTCCTCTATCAGCATT TTTGGCCTGGGTGGACTCAGACCAGCTCATCTATCAGCATT < 41bp 1 0.414019751739451 1 0.783308863639832 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 29 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54681959 chr1:54681967 nonsynonymous SNV 0.942 4 hm6A_associated_SNPs_76536 0 0 1 2 54681945 54681969 mRNA hsa-miR-28-5p MRPL37 miRanda miRanda
14034 chr1 54681967 54681967 1 + C A UCEC 54681959 + 54681939 54681979 41 TTTGGCCTGGGTGGACTCAGACCAGCTCCTCTATCAGCATT TTTGGCCTGGGTGGACTCAGACCAGCTCATCTATCAGCATT < 41bp 1 0.414019751739451 1 0.783308863639832 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 29 MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54681959 chr1:54681967 nonsynonymous SNV 0.942 4 hm6A_associated_SNPs_76536 0 0 1 2 54681947 54681969 mRNA hsa-miR-708 MRPL37 miRanda miRanda
14034 chr8 48320498 48320498 1 + T C UCEC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGCATTTCTTACCA < 41bp 1 0.312608284605606 1 0.0493671000003815 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320498 nonsynonymous SNV . 0 hm6A_associated_SNPs_76545 0 0 1 2 48320493 48320513 mRNA hsa-miR-9 KIAA0146 miRanda miRanda
14034 chr8 48320498 48320498 1 + T C UCEC 48320489 + 48320469 48320509 41 TCTGCTATTTCTTTGTGGAGACATCAATGTATTTCTTACCA TCTGCTATTTCTTTGTGGAGACATCAATGCATTTCTTACCA < 41bp 1 0.312608284605606 1 0.0493671000003815 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 30 SPIDR ENSG00000164808 CDS Human protein_coding chr8:48320489 chr8:48320498 nonsynonymous SNV . 0 hm6A_associated_SNPs_76545 0 0 1 2 48320487 48320506 mRNA hsa-miR-539 KIAA0146 miRanda miRanda
14034 chr1 145281397 145281397 1 + C T UCEC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAATGGACCGATGCCTGTCTGTCTCAT < 41bp 1 0.0720230309273855 1 0.132568866014481 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281397 synonymous SNV . 0 hm6A_associated_SNPs_76563 0 0 1 1 145281387 145281409 mRNA hsa-miR-185 NOTCH2NL miRanda miRanda
14034 chr21 30699317 30699317 1 + G A UCEC 30699330 + 30699310 30699350 41 GTGGAGCGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG GTGGAGCAAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG < 41bp 1 0.793386795799495 1 0.910905480384827 experiment 0.41322640840101 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699330 chr21:30699317 nonsynonymous SNV 0.977 3 hm6A_associated_SNPs_76572 0 0 1 2 30699316 30699339 mRNA hsa-miR-138 BACH1 miRanda miRanda
14034 chr21 30699317 30699317 1 + G A UCEC 30699330 + 30699310 30699350 41 GTGGAGCGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG GTGGAGCAAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTG < 41bp 1 0.793386795799495 1 0.910905480384827 experiment 0.41322640840101 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699330 chr21:30699317 nonsynonymous SNV 0.977 3 hm6A_associated_SNPs_76572 0 0 1 2 30699309 30699331 mRNA hsa-miR-544 BACH1 miRanda miRanda
14034 chrX 73046580 73046580 1 - G A UCEC 73046562 - 73046542 73046582 41 AGCGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAG AGTGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAG < 41bp 1 0.377944541154678 1 0.941439568996429 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 3 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046562 chrX:73046580 . . 0 hm6A_associated_SNPs_76576 0 0 1 1 73046561 73046582 lncRNA hsa-miR-526b-5p XIST miRanda starBase2
14034 chrX 73046580 73046580 1 - G A UCEC 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGATAGAGGACCCAAGTGAAAAAGGTATCT < 41bp 1 0.309471758329712 1 0.898780226707458 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 28 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046580 . . 0 hm6A_associated_SNPs_76577 0 0 1 1 73046561 73046582 lncRNA hsa-miR-526b-5p XIST miRanda starBase2
14034 chr11 836375 836375 1 + T C UCEC 836386 + 836366 836406 41 CGGGCACTGTCGTCATGGTGACTGGGGTCTTGGGCTGCTGC CGGGCACTGCCGTCATGGTGACTGGGGTCTTGGGCTGCTGC < 41bp 1 0.497830914349547 1 0.923644542694092 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 10 CD151 ENSG00000177697 CDS Human protein_coding chr11:836386 chr11:836375 nonsynonymous SNV 0.050 1 hm6A_associated_SNPs_76665 0 0 1 1 836368 836389 mRNA hsa-miR-29b CD151 miRanda miRanda
14034 chr7 86794301 86794301 1 + C A UCEC 86794307 + 86794287 86794327 41 AGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGG AGTAACAGTAGAAAATGTGAACTCTGTGACTTTGACTCAGG < 41bp 1 0.517297312792974 1 0.941890239715576 experiment 0.965405374414052 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794307 chr7:86794301 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_76709 0 0 1 3 86794286 86794307 mRNA hsa-miR-27a DMTF1 miRanda miRanda
14034 chr7 86794301 86794301 1 + C A UCEC 86794307 + 86794287 86794327 41 AGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGG AGTAACAGTAGAAAATGTGAACTCTGTGACTTTGACTCAGG < 41bp 1 0.517297312792974 1 0.941890239715576 experiment 0.965405374414052 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794307 chr7:86794301 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_76709 0 0 1 3 86794301 86794319 mRNA hsa-miR-224 DMTF1 miRanda miRanda
14034 chr7 86794301 86794301 1 + C A UCEC 86794307 + 86794287 86794327 41 AGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGG AGTAACAGTAGAAAATGTGAACTCTGTGACTTTGACTCAGG < 41bp 1 0.517297312792974 1 0.941890239715576 experiment 0.965405374414052 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794307 chr7:86794301 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_76709 0 0 1 3 86794285 86794307 mRNA hsa-miR-27b DMTF1 miRanda miRanda
14034 chr21 35144529 35144529 1 + C T UCEC 35144537 + 35144517 35144557 41 CAGGAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAGCA CAGGAGCAAGAGTGCAAAAGACAACTGGAACTGGAGAAGCA < 41bp 1 0.718984512285294 1 0.973187923431396 experiment 0.562030975429411 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35144537 chr21:35144529 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_76740 0 0 1 1 35144524 35144546 mRNA hsa-miR-145 ITSN1 miRanda miRanda
14034 chr12 108091245 108091245 1 + A G UCEC 108091265 + 108091245 108091285 41 AAATTACATTGCTGTAGGAAACATGACCCCTGTTATTGAAG GAATTACATTGCTGTAGGAAACATGACCCCTGTTATTGAAG < 41bp 1 0.777921165228975 1 0.868219017982483 experiment 0.444157669542049 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108091265 chr12:108091245 synonymous SNV . 0 hm6A_associated_SNPs_76745 0 0 1 1 108091244 108091246 mRNA hsa-miR-145 PWP1 miRanda miRanda
14034 chr4 128635185 128635185 1 + G A UCEC 128635202 + 128635182 128635222 41 AATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA AATATTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA < 41bp 1 0.368749600116578 1 0.911304712295532 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 INTU ENSG00000164066 CDS Human protein_coding chr4:128635202 chr4:128635185 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76755 0 0 1 7 128635163 128635187 mRNA hsa-miR-181a INTU miRanda miRanda
14034 chr4 128635185 128635185 1 + G A UCEC 128635202 + 128635182 128635222 41 AATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA AATATTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA < 41bp 1 0.368749600116578 1 0.911304712295532 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 INTU ENSG00000164066 CDS Human protein_coding chr4:128635202 chr4:128635185 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76755 0 0 1 7 128635165 128635187 mRNA hsa-miR-181b INTU miRanda miRanda
14034 chr4 128635185 128635185 1 + G A UCEC 128635202 + 128635182 128635222 41 AATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA AATATTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA < 41bp 1 0.368749600116578 1 0.911304712295532 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 INTU ENSG00000164066 CDS Human protein_coding chr4:128635202 chr4:128635185 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76755 0 0 1 7 128635166 128635187 mRNA hsa-miR-181c INTU miRanda miRanda
14034 chr4 128635185 128635185 1 + G A UCEC 128635202 + 128635182 128635222 41 AATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA AATATTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA < 41bp 1 0.368749600116578 1 0.911304712295532 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 INTU ENSG00000164066 CDS Human protein_coding chr4:128635202 chr4:128635185 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76755 0 0 1 7 128635183 128635203 mRNA hsa-miR-145 INTU miRanda miRanda
14034 chr4 128635185 128635185 1 + G A UCEC 128635202 + 128635182 128635222 41 AATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA AATATTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA < 41bp 1 0.368749600116578 1 0.911304712295532 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 INTU ENSG00000164066 CDS Human protein_coding chr4:128635202 chr4:128635185 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76755 0 0 1 7 128635172 128635194 mRNA hsa-miR-125a-3p INTU miRanda miRanda
14034 chr4 128635185 128635185 1 + G A UCEC 128635202 + 128635182 128635222 41 AATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA AATATTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA < 41bp 1 0.368749600116578 1 0.911304712295532 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 INTU ENSG00000164066 CDS Human protein_coding chr4:128635202 chr4:128635185 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76755 0 0 1 7 128635165 128635187 mRNA hsa-miR-181d INTU miRanda miRanda
14034 chr4 128635185 128635185 1 + G A UCEC 128635202 + 128635182 128635222 41 AATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA AATATTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCA < 41bp 1 0.368749600116578 1 0.911304712295532 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 4 INTU ENSG00000164066 CDS Human protein_coding chr4:128635202 chr4:128635185 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_76755 0 0 1 7 128635165 128635188 mRNA hsa-miR-543 INTU miRanda miRanda
14034 chr19 7975663 7975663 1 + G A UCEC 7975680 + 7975660 7975700 41 AGCGCATTCTGGGCAAGATGACAGTGGCGGTGAGTGACCAG AGCACATTCTGGGCAAGATGACAGTGGCGGTGAGTGACCAG < 41bp 1 0.341955213210681 1 0.997681558132172 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 4 MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7975680 chr19:7975663 nonsynonymous SNV 0.963 0 hm6A_associated_SNPs_76760 0 0 1 1 7975662 7975685 mRNA hsa-miR-217 MAP2K7 miRanda miRanda
14034 chr1 39951461 39951461 1 + C T UCEC 39951446 + 39951426 39951466 41 CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGCGATAA CCACCACTGCCTCCCCCAGGACTCCAGGTCCCAAGTGATAA < 41bp 1 0.601516285492386 1 0.964829087257385 experiment 0.796967429015228 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control 36 MACF1 ENSG00000127603 CDS Human protein_coding chr1:39951446 chr1:39951461 stopgain 1.000 1 hm6A_associated_SNPs_76782 0 0 1 1 39951448 39951471 mRNA hsa-miR-154 MACF1 miRanda miRanda
14034 chr2 71653717 71653717 1 + C T UCEC 71653701 + 71653681 71653721 41 TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCCTTTC TAAAGGGAAAAAGGAAAGAAACTCTCAAAAATGTTCTTTTC < 41bp 1 0.719399047281507 1 0.99519419670105 experiment 0.561201905436986 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 37 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71653701 chr2:71653717 nonsynonymous SNV 0.461 3 hm6A_associated_SNPs_76833 0 0 1 1 71653703 71653723 mRNA hsa-miR-488 ZNF638 miRanda miRanda
14034 chr20 43566760 43566760 1 + G A UCEC 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA AGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA < 41bp 1 0.583124781659176 1 0.673630177974701 experiment 0.833750436681648 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566760 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_76903 0 0 1 6 43566750 43566772 mRNA hsa-miR-15a PABPC1L miRanda miRanda
14034 chr20 43566760 43566760 1 + G A UCEC 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA AGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA < 41bp 1 0.583124781659176 1 0.673630177974701 experiment 0.833750436681648 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566760 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_76903 0 0 1 6 43566748 43566772 mRNA hsa-miR-16 PABPC1L miRanda miRanda
14034 chr20 43566760 43566760 1 + G A UCEC 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA AGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA < 41bp 1 0.583124781659176 1 0.673630177974701 experiment 0.833750436681648 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566760 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_76903 0 0 1 6 43566750 43566772 mRNA hsa-miR-15b PABPC1L miRanda miRanda
14034 chr20 43566760 43566760 1 + G A UCEC 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA AGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA < 41bp 1 0.583124781659176 1 0.673630177974701 experiment 0.833750436681648 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566760 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_76903 0 0 1 6 43566749 43566772 mRNA hsa-miR-195 PABPC1L miRanda miRanda
14034 chr20 43566760 43566760 1 + G A UCEC 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA AGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA < 41bp 1 0.583124781659176 1 0.673630177974701 experiment 0.833750436681648 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566760 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_76903 0 0 1 6 43566749 43566772 mRNA hsa-miR-424 PABPC1L miRanda miRanda
14034 chr20 43566760 43566760 1 + G A UCEC 43566780 + 43566760 43566800 41 GGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA AGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCA < 41bp 1 0.583124781659176 1 0.673630177974701 experiment 0.833750436681648 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 1 PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566780 chr20:43566760 nonsynonymous SNV 0.989 1 hm6A_associated_SNPs_76903 0 0 1 6 43566751 43566772 mRNA hsa-miR-497 PABPC1L miRanda miRanda
14034 chr6 137147508 137147508 1 + A G UCEC 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTGACTTGGAGTGAGAACAACGAGCATGTCCTCATCA < 41bp 1 0.74872984792738 1 0.0183493793010712 experiment 0.50254030414524 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147508 synonymous SNV . 0 hm6A_associated_SNPs_76917 0 0 0 2 137147505 137147526 mRNA hsa-miR-125a-3p PEX7 miRanda miRanda
14034 chr6 137147508 137147508 1 + A G UCEC 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTGACTTGGAGTGAGAACAACGAGCATGTCCTCATCA < 41bp 1 0.74872984792738 1 0.0183493793010712 experiment 0.50254030414524 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147508 synonymous SNV . 0 hm6A_associated_SNPs_76917 0 0 0 2 137147496 137147516 mRNA hsa-miR-613 PEX7 miRanda miRanda
14034 chr18 32889161 32889161 1 + T C UCEC 32889179 + 32889159 32889199 41 TCTTGTCATCTATAGATTGAACAAAAAGTGGTAGCTGTGAA TCCTGTCATCTATAGATTGAACAAAAAGTGGTAGCTGTGAA < 41bp 1 0.110336731405404 1 0.00346839427947998 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 3 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32889179 chr18:32889161 . . 0 hm6A_associated_SNPs_76926 0 0 1 1 32889151 32889175 mRNA hsa-miR-376b ZNF271 miRanda miRanda
14034 chr20 39704850 39704850 1 + G T UCEC 39704859 + 39704839 39704879 41 AAAGAGAAGGAGAAGACCAAACACAAAGATGGAAGCTCAGA AAAGAGAAGGATAAGACCAAACACAAAGATGGAAGCTCAGA < 41bp 1 0.592128055214855 1 0.9238520860672 experiment 0.815743889570289 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 TOP1 ENSG00000198900 CDS Human protein_coding chr20:39704859 chr20:39704850 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_76946 0 0 1 2 39704838 39704859 mRNA hsa-miR-133a TOP1 miRanda miRanda
14034 chr20 39704850 39704850 1 + G T UCEC 39704859 + 39704839 39704879 41 AAAGAGAAGGAGAAGACCAAACACAAAGATGGAAGCTCAGA AAAGAGAAGGATAAGACCAAACACAAAGATGGAAGCTCAGA < 41bp 1 0.592128055214855 1 0.9238520860672 experiment 0.815743889570289 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 TOP1 ENSG00000198900 CDS Human protein_coding chr20:39704859 chr20:39704850 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_76946 0 0 1 2 39704838 39704859 mRNA hsa-miR-133b TOP1 miRanda miRanda
14034 chr11 46749673 46749673 1 + A C UCEC 46749656 + 46749636 46749676 41 CCTCCTGTACCCGCCCTGGGACAAGAACTTCACCGAGAATG CCTCCTGTACCCGCCCTGGGACAAGAACTTCACCGAGCATG < 41bp 1 0.516557501965191 1 0.897967457771301 experiment 0.966884996069619 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 38 F2 ENSG00000180210 CDS Human protein_coding chr11:46749656 chr11:46749673 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_76957 0 0 1 1 46749669 46749693 mRNA hsa-miR-183 F2 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905900 149905920 mRNA hsa-miR-148a MTMR1 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905894 149905920 mRNA hsa-miR-130a MTMR1 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905901 149905920 mRNA hsa-miR-152 MTMR1 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905899 149905920 mRNA hsa-miR-301a MTMR1 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905899 149905920 mRNA hsa-miR-130b MTMR1 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905900 149905920 mRNA hsa-miR-148b MTMR1 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905898 149905920 mRNA hsa-miR-454 MTMR1 miRanda miRanda
14034 chrX 149905915 149905915 1 + G A UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGACACAGGTTTACACTGGTAAG < 41bp 1 0.534957244389944 1 0.908650994300842 experiment 0.930085511220112 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 31 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905915 nonsynonymous SNV 0.988 3 hm6A_associated_SNPs_76970 0 0 0 8 149905898 149905920 mRNA hsa-miR-301b MTMR1 miRanda miRanda
14034 chr16 48303929 48303929 1 + C T UCEC 48303936 + 48303916 48303956 41 TTATTTGACAGACCGCCTGGACATTAGGGCAGCCCGGATTC TTATTTGACAGACTGCCTGGACATTAGGGCAGCCCGGATTC < 41bp 1 0.586876405941347 1 0.807697892189026 experiment 0.826247188117306 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48303936 chr16:48303929 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_76971 0 0 1 1 48303927 48303929 mRNA hsa-miR-223 LONP2 miRanda miRanda
14034 chr11 117030683 117030683 1 + G T UCEC 117030678 + 117030658 117030698 41 ATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGT ATTTGTTTTGGACTGTAAAGACAAATAGCCTGATGTACTGT < 41bp 1 0.671542265368017 1 0.766172170639038 experiment 0.656915469263965 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117030678 chr11:117030683 stopgain 1.000 1 hm6A_associated_SNPs_77007 0 0 1 1 117030679 117030699 mRNA hsa-miR-101 PAFAH1B2 miRanda miRanda
14034 chrX 73040937 73040937 1 - G T UCEC 73040955 - 73040935 73040975 41 CAATGTGTGGTATCAGCTGGACTCAGTAACACCCCTTTCTT CAATGTGTGGTATCAGCTGGACTCAGTAACACCCCTTTATT < 41bp 1 0.379723839178255 1 0.956938087940216 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040955 chrX:73040937 . . 0 hm6A_associated_SNPs_77018 0 0 1 1 73040924 73040946 lncRNA hsa-miR-2355-5p XIST miRanda starBase2
14034 chr10 101503029 101503029 1 + C A UCEC 101503021 + 101503001 101503041 41 AATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTT AATTGAGGTGATGAAGGCTGACATTCGTATTGCCAAGCTTT < 41bp 1 0.769046295014008 1 0.533976852893829 experiment 0.461907409971984 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 29 CUTC ENSG00000119929 CDS Human protein_coding chr10:101503021 chr10:101503029 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_77056 0 0 1 3 101503014 101503035 mRNA hsa-miR-31 CUTC miRanda miRanda
14034 chr10 101503029 101503029 1 + C A UCEC 101503021 + 101503001 101503041 41 AATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTT AATTGAGGTGATGAAGGCTGACATTCGTATTGCCAAGCTTT < 41bp 1 0.769046295014008 1 0.533976852893829 experiment 0.461907409971984 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 29 CUTC ENSG00000119929 CDS Human protein_coding chr10:101503021 chr10:101503029 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_77056 0 0 1 3 101503028 101503050 mRNA hsa-miR-29b CUTC miRanda miRanda
14034 chr10 101503029 101503029 1 + C A UCEC 101503021 + 101503001 101503041 41 AATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTT AATTGAGGTGATGAAGGCTGACATTCGTATTGCCAAGCTTT < 41bp 1 0.769046295014008 1 0.533976852893829 experiment 0.461907409971984 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 29 CUTC ENSG00000119929 CDS Human protein_coding chr10:101503021 chr10:101503029 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_77056 0 0 1 3 101503015 101503037 mRNA hsa-miR-182 CUTC miRanda miRanda
14034 chr10 69881716 69881716 1 + G T UCEC 69881717 + 69881697 69881737 41 CACAGCTCCAAAAGGATTAGACCTCGTGCCTGCAAAAACCA CACAGCTCCAAAAGGATTATACCTCGTGCCTGCAAAAACCA Direct Loss 1 0.699896939425549 1 0.989140748977661 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 20 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881717 chr10:69881716 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_77058 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chr10 69881716 69881716 1 + G T UCEC 69881734 + 69881714 69881754 41 TAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT TATACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGAAT < 41bp 1 0.708686714033378 1 0.995906829833984 experiment 0.582626571933244 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 3 MYPN ENSG00000138347 CDS Human protein_coding chr10:69881734 chr10:69881716 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_77059 0 0 1 1 69881714 69881735 mRNA hsa-miR-129-5p MYPN miRanda miRanda
14034 chrX 77373623 77373623 1 + G T UCEC 77373610 + 77373590 77373630 41 TTTGATGAAGAAGGAGCTGAACTACTTTGCAAAGGCCTTGG TTTGATGAAGAAGGAGCTGAACTACTTTGCAAATGCCTTGG < 41bp 1 0.333604970550263 1 0.0841300487518311 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373610 chrX:77373623 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_77086 0 0 1 2 77373617 77373642 mRNA hsa-miR-330-5p PGK1 miRanda miRanda
14034 chrX 77373623 77373623 1 + G T UCEC 77373610 + 77373590 77373630 41 TTTGATGAAGAAGGAGCTGAACTACTTTGCAAAGGCCTTGG TTTGATGAAGAAGGAGCTGAACTACTTTGCAAATGCCTTGG < 41bp 1 0.333604970550263 1 0.0841300487518311 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373610 chrX:77373623 nonsynonymous SNV 0.985 4 hm6A_associated_SNPs_77086 0 0 1 2 77373623 77373642 mRNA hsa-miR-326 PGK1 miRanda miRanda
14034 chr22 35719140 35719140 1 + C T UCEC 35719148 + 35719128 35719168 41 CCCACCCACCATCGTGCATGACAAAGTGCTCAACCTCATCC CCCACCCACCATTGTGCATGACAAAGTGCTCAACCTCATCC < 41bp 1 0.613103082985925 1 0.737756848335266 experiment 0.773793834028151 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719148 chr22:35719140 nonsynonymous SNV . 0 hm6A_associated_SNPs_77134 0 0 1 1 35719138 35719161 mRNA hsa-miR-1271 TOM1 miRanda miRanda
14034 chr1 170508637 170508637 1 + T C UCEC 170508622 + 170508602 170508642 41 AGTCAGCCAAAGGAACTGGGACTTGAGAATTCCCATGATGG AGTCAGCCAAAGGAACTGGGACTTGAGAATTCCCACGATGG < 41bp 1 0.456449857112241 1 0.998576045036316 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 GORAB ENSG00000120370 CDS Human protein_coding chr1:170508622 chr1:170508637 synonymous SNV . 0 hm6A_associated_SNPs_77193 0 0 0 1 170508628 170508649 mRNA hsa-miR-758 GORAB miRanda miRanda
14034 chr11 117030674 117030674 1 + A G UCEC 117030678 + 117030658 117030698 41 ATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGT ATTTGTTTTGGACTGTGAAGACAAAGAGCCTGATGTACTGT < 41bp 1 0.685694859084068 1 0.906748950481415 experiment 0.628610281831865 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117030678 chr11:117030674 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_77200 0 0 1 2 117030656 117030675 mRNA hsa-miR-212 PAFAH1B2 miRanda miRanda
14034 chr11 117030674 117030674 1 + A G UCEC 117030678 + 117030658 117030698 41 ATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGT ATTTGTTTTGGACTGTGAAGACAAAGAGCCTGATGTACTGT < 41bp 1 0.685694859084068 1 0.906748950481415 experiment 0.628610281831865 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 17 PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117030678 chr11:117030674 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_77200 0 0 1 2 117030654 117030675 mRNA hsa-miR-132 PAFAH1B2 miRanda miRanda
14034 chr17 18110248 18110248 1 + G A UCEC 18110240 + 18110220 18110260 41 AACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAA AACAGGGACCCTGCTCTGAAACCCAAGCAGTCCCACCGCAA < 41bp 1 0.274965849349798 1 0.0517054200172424 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 29 ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18110240 chr17:18110248 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_77206 0 0 1 1 18110246 18110268 mRNA hsa-miR-346 ALKBH5 miRanda miRanda
14034 chr3 129200436 129200436 1 + C T UCEC 129200446 + 129200426 129200466 41 CACAGCTGTGCGCTGCTTGGACATGAGTGCCTCCCGTAAGA CACAGCTGTGTGCTGCTTGGACATGAGTGCCTCCCGTAAGA < 41bp 1 0.714603674311436 1 0.995267271995544 experiment 0.570792651377129 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 11 IFT122 ENSG00000163913 CDS Human protein_coding chr3:129200446 chr3:129200436 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_77311 0 0 0 1 129200423 129200443 mRNA hsa-miR-503 IFT122 miRanda miRanda
14034 chr11 86048516 86048516 1 + G A UCEC 86048508 + 86048488 86048528 41 AATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTC AATTTCAGTGGAATTATTAGACAGTATGACTCAGCAGACTC < 41bp 1 0.59867909771703 1 0.12149304151535 experiment 0.802641804565939 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 29 HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048508 chr11:86048516 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_77315 0 0 1 1 86048507 86048531 mRNA hsa-miR-28-5p C11orf73 miRanda miRanda
14034 chr7 4821315 4821315 1 + T C UCEC 4821330 + 4821310 4821350 41 CAGCCTCAGCCTGGCCTGGGACCACACGCAGAACAGCCGGC CAGCCCCAGCCTGGCCTGGGACCACACGCAGAACAGCCGGC < 41bp 1 0.212863884017546 1 0.884183824062347 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 6 AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4821330 chr7:4821315 nonsynonymous SNV 0.024 2 hm6A_associated_SNPs_77368 0 0 1 1 4821296 4821317 mRNA hsa-miR-485-5p KIAA0415 miRanda miRanda
14034 chr20 21142905 21142905 1 + G A UCEC 21142925 + 21142905 21142945 41 GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGA AAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGA < 41bp 1 0.309888560045724 1 0.826492309570312 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142925 chr20:21142905 . 1.000 2 hm6A_associated_SNPs_77440 0 0 1 2 21142896 21142916 mRNA hsa-miR-129-5p PLK1S1 miRanda miRanda
14034 chr20 21142905 21142905 1 + G A UCEC 21142925 + 21142905 21142945 41 GAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGA AAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGA < 41bp 1 0.309888560045724 1 0.826492309570312 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 1 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21142925 chr20:21142905 . 1.000 2 hm6A_associated_SNPs_77440 0 0 1 2 21142889 21142910 mRNA hsa-miR-205 PLK1S1 miRanda miRanda
14034 chr6 117869595 117869595 1 + T G UCEC 117869603 + 117869583 117869623 41 CCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTG CCATGACTGCCCGTTTGTGAACACAATGTGAAAGAAGCCTG < 41bp 1 0.757660476498892 1 0.999222874641418 experiment 0.484679047002216 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869603 chr6:117869595 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_77453 0 0 1 2 117869594 117869614 mRNA hsa-miR-23a DCBLD1 miRanda miRanda
14034 chr6 117869595 117869595 1 + T G UCEC 117869603 + 117869583 117869623 41 CCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTG CCATGACTGCCCGTTTGTGAACACAATGTGAAAGAAGCCTG < 41bp 1 0.757660476498892 1 0.999222874641418 experiment 0.484679047002216 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 13 DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869603 chr6:117869595 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_77453 0 0 1 2 117869594 117869614 mRNA hsa-miR-23b DCBLD1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905900 149905920 mRNA hsa-miR-148a MTMR1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905894 149905920 mRNA hsa-miR-130a MTMR1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905901 149905920 mRNA hsa-miR-152 MTMR1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905899 149905920 mRNA hsa-miR-301a MTMR1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905899 149905920 mRNA hsa-miR-130b MTMR1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905900 149905920 mRNA hsa-miR-148b MTMR1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905898 149905920 mRNA hsa-miR-454 MTMR1 miRanda miRanda
14034 chrX 149905906 149905906 1 + C T UCEC 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAAGCTTTGGATACAGGTTTGCACTGGTAAG Direct Loss 1 0.519409427749831 1 0.836716890335083 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 22 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905906 nonsynonymous SNV 0.987 5 hm6A_associated_SNPs_77473 0 0 0 8 149905898 149905920 mRNA hsa-miR-301b MTMR1 miRanda miRanda
14034 chr12 32854406 32854406 1 + G T UCEC 32854392 + 32854372 32854412 41 AGAAAGCCTGGTGGGGAGGGACCTGCTTCCCAGAGGTACTG AGAAAGCCTGGTGGGGAGGGACCTGCTTCCCAGATGTACTG < 41bp 1 0.261765750272121 1 0.127646744251251 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 DNM1L ENSG00000087470 CDS Human protein_coding chr12:32854392 chr12:32854406 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_77497 0 0 1 2 32854385 32854407 mRNA hsa-miR-330-5p DNM1L miRanda miRanda
14034 chr12 32854406 32854406 1 + G T UCEC 32854392 + 32854372 32854412 41 AGAAAGCCTGGTGGGGAGGGACCTGCTTCCCAGAGGTACTG AGAAAGCCTGGTGGGGAGGGACCTGCTTCCCAGATGTACTG < 41bp 1 0.261765750272121 1 0.127646744251251 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 DNM1L ENSG00000087470 CDS Human protein_coding chr12:32854392 chr12:32854406 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_77497 0 0 1 2 32854384 32854407 mRNA hsa-miR-326 DNM1L miRanda miRanda
14034 chr2 86352176 86352176 1 + T C UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGAGAAAAATGAACATTCCCATTGCACAATGAT < 41bp 1 0.787023404548549 1 0.215230494737625 experiment 0.425953190902902 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352176 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_77501 0 0 1 6 86352162 86352184 mRNA hsa-miR-19a PTCD3 miRanda miRanda
14034 chr2 86352176 86352176 1 + T C UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGAGAAAAATGAACATTCCCATTGCACAATGAT < 41bp 1 0.787023404548549 1 0.215230494737625 experiment 0.425953190902902 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352176 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_77501 0 0 1 6 86352162 86352184 mRNA hsa-miR-19b PTCD3 miRanda miRanda
14034 chr2 86352176 86352176 1 + T C UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGAGAAAAATGAACATTCCCATTGCACAATGAT < 41bp 1 0.787023404548549 1 0.215230494737625 experiment 0.425953190902902 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352176 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_77501 0 0 1 6 86352162 86352186 mRNA hsa-miR-182 PTCD3 miRanda miRanda
14034 chr2 86352176 86352176 1 + T C UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGAGAAAAATGAACATTCCCATTGCACAATGAT < 41bp 1 0.787023404548549 1 0.215230494737625 experiment 0.425953190902902 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352176 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_77501 0 0 1 6 86352155 86352176 mRNA hsa-miR-1 PTCD3 miRanda miRanda
14034 chr2 86352176 86352176 1 + T C UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGAGAAAAATGAACATTCCCATTGCACAATGAT < 41bp 1 0.787023404548549 1 0.215230494737625 experiment 0.425953190902902 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352176 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_77501 0 0 1 6 86352155 86352176 mRNA hsa-miR-206 PTCD3 miRanda miRanda
14034 chr2 86352176 86352176 1 + T C UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGAGAAAAATGAACATTCCCATTGCACAATGAT < 41bp 1 0.787023404548549 1 0.215230494737625 experiment 0.425953190902902 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352176 nonsynonymous SNV 0.951 4 hm6A_associated_SNPs_77501 0 0 1 6 86352157 86352176 mRNA hsa-miR-613 PTCD3 miRanda miRanda
14034 chr2 217280194 217280194 1 + C T UCEC 217280198 + 217280178 217280218 41 TTGATTGGGTACAATGCGGAACTCATTGCAGTGTTTAAGAC TTGATTGGGTACAATGTGGAACTCATTGCAGTGTTTAAGAC < 41bp 1 0.648074956879471 1 0.915799617767334 experiment 0.703850086241059 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217280198 chr2:217280194 nonsynonymous SNV 0.010 1 hm6A_associated_SNPs_77511 0 0 1 2 217280192 217280213 mRNA hsa-miR-141 SMARCAL1 miRanda miRanda
14034 chr2 217280194 217280194 1 + C T UCEC 217280198 + 217280178 217280218 41 TTGATTGGGTACAATGCGGAACTCATTGCAGTGTTTAAGAC TTGATTGGGTACAATGTGGAACTCATTGCAGTGTTTAAGAC < 41bp 1 0.648074956879471 1 0.915799617767334 experiment 0.703850086241059 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 17 SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217280198 chr2:217280194 nonsynonymous SNV 0.010 1 hm6A_associated_SNPs_77511 0 0 1 2 217280189 217280213 mRNA hsa-miR-200a SMARCAL1 miRanda miRanda
14034 chr16 68598598 68598598 1 + C A UCEC 68598595 + 68598575 68598615 41 AGAATTCATACTCGAAATAAACTCTAGGAACCGTGAAATTA AGAATTCATACTCGAAATAAACTATAGGAACCGTGAAATTA < 41bp 1 0.798565303576698 1 0.999746382236481 experiment 0.402869392846603 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 24 ZFP90 ENSG00000184939 CDS Human protein_coding chr16:68598595 chr16:68598598 synonymous SNV . 0 hm6A_associated_SNPs_77544 0 0 1 1 68598586 68598605 mRNA hsa-miR-384 ZFP90 miRanda miRanda
14034 chr1 235577812 235577812 1 + G A UCEC 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTACTACAATTAAGA < 41bp 1 0.570175698813044 1 0.978604316711426 experiment 0.859648602373913 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577812 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_77550 0 0 1 6 235577796 235577817 mRNA hsa-miR-25 TBCE miRanda miRanda
14034 chr1 235577812 235577812 1 + G A UCEC 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTACTACAATTAAGA < 41bp 1 0.570175698813044 1 0.978604316711426 experiment 0.859648602373913 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577812 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_77550 0 0 1 6 235577797 235577817 mRNA hsa-miR-32 TBCE miRanda miRanda
14034 chr1 235577812 235577812 1 + G A UCEC 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTACTACAATTAAGA < 41bp 1 0.570175698813044 1 0.978604316711426 experiment 0.859648602373913 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577812 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_77550 0 0 1 6 235577796 235577817 mRNA hsa-miR-92a TBCE miRanda miRanda
14034 chr1 235577812 235577812 1 + G A UCEC 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTACTACAATTAAGA < 41bp 1 0.570175698813044 1 0.978604316711426 experiment 0.859648602373913 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577812 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_77550 0 0 1 6 235577796 235577817 mRNA hsa-miR-363 TBCE miRanda miRanda
14034 chr1 235577812 235577812 1 + G A UCEC 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTACTACAATTAAGA < 41bp 1 0.570175698813044 1 0.978604316711426 experiment 0.859648602373913 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577812 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_77550 0 0 1 6 235577796 235577817 mRNA hsa-miR-367 TBCE miRanda miRanda
14034 chr1 235577812 235577812 1 + G A UCEC 235577801 + 235577781 235577821 41 CAAGGTAAATTTTGGAACAGACTTTCTTACTGCAATTAAGA CAAGGTAAATTTTGGAACAGACTTTCTTACTACAATTAAGA < 41bp 1 0.570175698813044 1 0.978604316711426 experiment 0.859648602373913 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 TBCE ENSG00000116957 CDS Human protein_coding chr1:235577801 chr1:235577812 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_77550 0 0 1 6 235577796 235577817 mRNA hsa-miR-92b TBCE miRanda miRanda
14034 chr20 36488325 36488325 1 + A G UCEC 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCGTCGACAATGACACCGAGGAGGAGTTCTACC < 41bp 1 0.633137795575008 1 0.898580610752106 experiment 0.733724408849983 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488325 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_77563 0 0 1 1 36488309 36488330 mRNA hsa-miR-433 CTNNBL1 miRanda miRanda
14034 chr10 131964789 131964789 1 + T C UCEC 131964805 + 131964785 131964825 41 ATGGTGGAAATTCTTCACAAACATAATATTCAGTTTAGCAG ATGGCGGAAATTCTTCACAAACATAATATTCAGTTTAGCAG < 41bp 1 0.783265192214368 1 0.407894432544708 experiment 0.433469615571264 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964805 chr10:131964789 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_77577 0 0 1 2 131964778 131964801 mRNA hsa-miR-186 GLRX3 miRanda miRanda
14034 chr10 131964789 131964789 1 + T C UCEC 131964805 + 131964785 131964825 41 ATGGTGGAAATTCTTCACAAACATAATATTCAGTTTAGCAG ATGGCGGAAATTCTTCACAAACATAATATTCAGTTTAGCAG < 41bp 1 0.783265192214368 1 0.407894432544708 experiment 0.433469615571264 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 5 GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964805 chr10:131964789 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_77577 0 0 1 2 131964783 131964805 mRNA hsa-miR-758 GLRX3 miRanda miRanda
14034 chr14 74532038 74532038 1 + T C UCEC 74532049 + 74532029 74532069 41 CCAAAAATCTCCTCTTTGTAACAGGTCATATTTGGCTGCCA CCAAAAATCCCCTCTTTGTAACAGGTCATATTTGGCTGCCA < 41bp 1 0.72564958462004 1 0.946764945983887 experiment 0.548700830759919 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74532049 chr14:74532038 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_77597 0 0 0 2 74532037 74532057 mRNA hsa-miR-192 C14orf45 miRanda miRanda
14034 chr14 74532038 74532038 1 + T C UCEC 74532049 + 74532029 74532069 41 CCAAAAATCTCCTCTTTGTAACAGGTCATATTTGGCTGCCA CCAAAAATCCCCTCTTTGTAACAGGTCATATTTGGCTGCCA < 41bp 1 0.72564958462004 1 0.946764945983887 experiment 0.548700830759919 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74532049 chr14:74532038 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_77597 0 0 0 2 74532037 74532057 mRNA hsa-miR-215 C14orf45 miRanda miRanda
14034 chr21 30699146 30699146 1 + A G UCEC 30699134 + 30699114 30699154 41 GTCTCTTTTACACACATATGACCAATATGGTGACTTGAATT GTCTCTTTTACACACATATGACCAATATGGTGGCTTGAATT < 41bp 1 0.552944634959538 1 0.95907461643219 experiment 0.894110730080923 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 33 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699134 chr21:30699146 nonsynonymous SNV 0.994 2 hm6A_associated_SNPs_77603 0 0 1 1 30699128 30699150 mRNA hsa-miR-224 BACH1 miRanda miRanda
14034 chr1 109321980 109321980 1 + A G UCEC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGGCCTTTCAGGCAATGGC < 41bp 1 0.32372087888358 1 0.292630791664124 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321980 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_77623 0 0 0 3 109321963 109321984 mRNA hsa-miR-196a STXBP3 miRanda miRanda
14034 chr1 109321980 109321980 1 + A G UCEC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGGCCTTTCAGGCAATGGC < 41bp 1 0.32372087888358 1 0.292630791664124 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321980 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_77623 0 0 0 3 109321961 109321982 mRNA hsa-miR-223 STXBP3 miRanda miRanda
14034 chr1 109321980 109321980 1 + A G UCEC 109321976 + 109321956 109321996 41 GTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGC GTGTCCACTGTCCTGCATGAACTGGCCTTTCAGGCAATGGC < 41bp 1 0.32372087888358 1 0.292630791664124 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321976 chr1:109321980 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_77623 0 0 0 3 109321968 109321988 mRNA hsa-miR-488 STXBP3 miRanda miRanda
14034 chrX 149809790 149809790 1 + G A UCEC 149809800 + 149809780 149809820 41 TAAGTGCTATGAGCTCTGTGACACTTACCCTGCTCTTTTGG TAAGTGCTATAAGCTCTGTGACACTTACCCTGCTCTTTTGG < 41bp 1 0.516111446464301 1 0.809369325637817 experiment 0.967777107071398 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149809800 chrX:149809790 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_77642 0 0 0 1 149809785 149809808 mRNA hsa-miR-142-3p MTM1 miRanda miRanda
14034 chr5 68398948 68398948 1 + A G UCEC 68398949 + 68398929 68398969 41 TCTGGGAAAACTATTACCAAACACCAGGTAAGATTTTTGCA TCTGGGAAAACTATTACCAGACACCAGGTAAGATTTTTGCA < 41bp 1 0.586559193478576 1 0.330264031887054 experiment 0.826881613042847 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 20 SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68398949 chr5:68398948 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_77671 0 0 1 1 68398931 68398951 mRNA hsa-miR-9 SLC30A5 miRanda miRanda
14034 chr19 1271155 1271155 1 + C T UCEC 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGATAGGGAGACCCAGAGATCTC Direct Loss 1 0.409539546428063 1 0.171204954385757 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 22 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271155 stopgain . 0 hm6A_associated_SNPs_77678 0 0 1 3 1271147 1271170 mRNA hsa-miR-330-5p CIRBP miRanda miRanda
14034 chr19 1271155 1271155 1 + C T UCEC 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGATAGGGAGACCCAGAGATCTC Direct Loss 1 0.409539546428063 1 0.171204954385757 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 22 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271155 stopgain . 0 hm6A_associated_SNPs_77678 0 0 1 3 1271152 1271170 mRNA hsa-miR-326 CIRBP miRanda miRanda
14034 chr19 1271155 1271155 1 + C T UCEC 1271154 + 1271134 1271174 41 CACAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTC CACAGTGGTGGTTGTGAAAGATAGGGAGACCCAGAGATCTC Direct Loss 1 0.409539546428063 1 0.171204954385757 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;HEK293;Control 22 CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271154 chr19:1271155 stopgain . 0 hm6A_associated_SNPs_77678 0 0 1 3 1271139 1271160 mRNA hsa-miR-339-5p CIRBP miRanda miRanda
14034 chr11 17351737 17351737 1 + T C UCEC 17351751 + 17351731 17351771 41 ATTGCTTTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA ATTGCTCTACAAGAAAATGAACTTAAGAAGAAGGCAGATGA < 41bp 1 0.754660111707186 1 0.990586400032043 experiment 0.490679776585628 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 7 NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17351751 chr11:17351737 synonymous SNV . 0 hm6A_associated_SNPs_77714 0 0 1 1 17351721 17351742 mRNA hsa-miR-340 NUCB2 miRanda miRanda
14034 chr1 10328222 10328222 1 + T C UCEC 10328238 + 10328218 10328258 41 CAGCTACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT CAGCCACAAACATGAATGAAACAAGTAGCCGTTCCCACGCT < 41bp 1 0.46425003496929 1 0.0268194079399109 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328238 chr1:10328222 synonymous SNV . 0 hm6A_associated_SNPs_77743 0 0 1 1 10328210 10328223 mRNA hsa-miR-22 KIF1B miRanda miRanda
14034 chrX 73045686 73045686 1 - C T UCEC 73045685 - 73045665 73045705 41 GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGC GTGGGAAGTTGATTTAAATAACTGATAATGTGTATGAAAGC < 41bp 1 0.255623142305616 1 0.0378736853599548 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045685 chrX:73045686 . . 0 hm6A_associated_SNPs_77782 0 0 1 3 73045677 73045696 lncRNA hsa-miR-374a-3p XIST miRanda starBase2
14034 chrX 73045686 73045686 1 - C T UCEC 73045685 - 73045665 73045705 41 GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGC GTGGGAAGTTGATTTAAATAACTGATAATGTGTATGAAAGC < 41bp 1 0.255623142305616 1 0.0378736853599548 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045685 chrX:73045686 . . 0 hm6A_associated_SNPs_77782 0 0 1 3 73045668 73045689 lncRNA hsa-miR-485-3p XIST miRanda starBase2
14034 chrX 73045686 73045686 1 - C T UCEC 73045685 - 73045665 73045705 41 GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGC GTGGGAAGTTGATTTAAATAACTGATAATGTGTATGAAAGC < 41bp 1 0.255623142305616 1 0.0378736853599548 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045685 chrX:73045686 . . 0 hm6A_associated_SNPs_77782 0 0 1 3 73045668 73045689 lncRNA hsa-miR-539-3p XIST miRanda starBase2
14034 chr3 160119740 160119740 1 + A G UCEC 160119751 + 160119731 160119771 41 AAGTTTAGAAGAGATTTTGAACAGCATTCCTCCTCCCCCGC AAGTTTAGAGGAGATTTTGAACAGCATTCCTCCTCCCCCGC < 41bp 1 0.452461062180727 1 0.68721067905426 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 10 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160119751 chr3:160119740 synonymous SNV . 0 hm6A_associated_SNPs_77790 0 0 1 1 160119725 160119747 mRNA hsa-miR-216b SMC4 miRanda miRanda
14034 chr17 55189219 55189219 1 + T C UCEC 55189216 + 55189196 55189236 41 ATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTAC ATGTGAGTTTTCTGAAGCAAACACCTGGTGCCAAGATCTAC < 41bp 1 0.692296491225726 1 0.034305602312088 experiment 0.615407017548547 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55189216 chr17:55189219 nonsynonymous SNV 0.940 4 hm6A_associated_SNPs_77810 0 0 1 3 55189211 55189230 mRNA hsa-miR-96 AKAP1 miRanda miRanda
14034 chr17 55189219 55189219 1 + T C UCEC 55189216 + 55189196 55189236 41 ATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTAC ATGTGAGTTTTCTGAAGCAAACACCTGGTGCCAAGATCTAC < 41bp 1 0.692296491225726 1 0.034305602312088 experiment 0.615407017548547 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55189216 chr17:55189219 nonsynonymous SNV 0.940 4 hm6A_associated_SNPs_77810 0 0 1 3 55189217 55189243 mRNA hsa-miR-203 AKAP1 miRanda miRanda
14034 chr17 55189219 55189219 1 + T C UCEC 55189216 + 55189196 55189236 41 ATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTAC ATGTGAGTTTTCTGAAGCAAACACCTGGTGCCAAGATCTAC < 41bp 1 0.692296491225726 1 0.034305602312088 experiment 0.615407017548547 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55189216 chr17:55189219 nonsynonymous SNV 0.940 4 hm6A_associated_SNPs_77810 0 0 1 3 55189210 55189230 mRNA hsa-miR-1271 AKAP1 miRanda miRanda
14034 chr15 49917433 49917433 1 + A G UCEC 49917428 + 49917408 49917448 41 ATAGTTCAAAATTTGTGGAAACAAAACAGTCACAAACTACT ATAGTTCAAAATTTGTGGAAACAAAGCAGTCACAAACTACT < 41bp 1 0.764063293723064 1 0.873836398124695 experiment 0.471873412553872 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917428 chr15:49917433 synonymous SNV . 0 hm6A_associated_SNPs_77843 0 0 0 2 49917420 49917441 mRNA hsa-miR-134 DTWD1 miRanda miRanda
14034 chr15 49917433 49917433 1 + A G UCEC 49917428 + 49917408 49917448 41 ATAGTTCAAAATTTGTGGAAACAAAACAGTCACAAACTACT ATAGTTCAAAATTTGTGGAAACAAAGCAGTCACAAACTACT < 41bp 1 0.764063293723064 1 0.873836398124695 experiment 0.471873412553872 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 26 DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917428 chr15:49917433 synonymous SNV . 0 hm6A_associated_SNPs_77843 0 0 0 2 49917417 49917443 mRNA hsa-miR-758 DTWD1 miRanda miRanda
14034 chr6 147684702 147684702 1 + T A UCEC 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AAACTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.144711981720376 1 0.94405472278595 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684702 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_77863 0 0 0 4 147684691 147684712 mRNA hsa-miR-34a STXBP5 miRanda miRanda
14034 chr6 147684702 147684702 1 + T A UCEC 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AAACTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.144711981720376 1 0.94405472278595 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684702 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_77863 0 0 0 4 147684691 147684712 mRNA hsa-miR-34c-5p STXBP5 miRanda miRanda
14034 chr6 147684702 147684702 1 + T A UCEC 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AAACTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.144711981720376 1 0.94405472278595 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684702 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_77863 0 0 0 4 147684688 147684712 mRNA hsa-miR-449a STXBP5 miRanda miRanda
14034 chr6 147684702 147684702 1 + T A UCEC 147684720 + 147684700 147684740 41 AATCTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA AAACTCACTGCCAACCCAGAACTGTGCTTATAAGCAAAATA < 41bp 1 0.144711981720376 1 0.94405472278595 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 3 STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147684720 chr6:147684702 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_77863 0 0 0 4 147684688 147684712 mRNA hsa-miR-449b STXBP5 miRanda miRanda
14034 chr18 32823221 32823221 1 + C A UCEC 32823215 + 32823195 32823235 41 TCCACCTCCAGCCCTTAAAGACACAGCTGAAATCCTGGAAA TCCACCTCCAGCCCTTAAAGACACAGATGAAATCCTGGAAA < 41bp 1 0.77616238463468 1 0.860414981842041 experiment 0.447675230730641 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 ZNF397 ENSG00000186812 CDS Human protein_coding chr18:32823215 chr18:32823221 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_77871 0 0 1 1 32823208 32823230 mRNA hsa-miR-876-5p ZNF397 miRanda miRanda
14034 chr12 95694213 95694213 1 + G A UCEC 95694206 + 95694186 95694226 41 CAATGTGAGAGTGAAGATGAACCACAAGCAGATGGAAGTGG CAATGTGAGAGTGAAGATGAACCACAAACAGATGGAAGTGG < 41bp 1 0.689220455117274 1 0.980001926422119 experiment 0.621559089765453 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 28 VEZT ENSG00000028203 CDS Human protein_coding chr12:95694206 chr12:95694213 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_77874 0 0 1 1 95694189 95694214 mRNA hsa-miR-9 VEZT miRanda miRanda
14034 chr12 95694213 95694213 1 + G A UCEC 95694231 + 95694211 95694251 41 AAGCAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCC AAACAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCC < 41bp 1 0.617119451812675 1 0.986139178276062 experiment 0.76576109637465 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 3 VEZT ENSG00000028203 CDS Human protein_coding chr12:95694231 chr12:95694213 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_77875 0 0 1 1 95694189 95694214 mRNA hsa-miR-9 VEZT miRanda miRanda
14034 chr1 235543402 235543402 1 + G T UCEC 235543421 + 235543401 235543441 41 AGAGTTGAAGTTAATGGAGAACATGCAACAGTACGTTTTGC ATAGTTGAAGTTAATGGAGAACATGCAACAGTACGTTTTGC < 41bp 1 0.658918429470194 1 0.210417777299881 experiment 0.682163141059613 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 2 TBCE ENSG00000116957 CDS Human protein_coding chr1:235543421 chr1:235543402 nonsynonymous SNV 0.996 4 hm6A_associated_SNPs_77960 0 0 1 1 235543398 235543420 mRNA hsa-miR-136 TBCE miRanda miRanda
14034 chr10 1053036 1053036 1 + C T UCEC 1053032 + 1053012 1053052 41 GTGAATGAGGTGCTGAATAGACTGCACCTGGCTATCCCAAC GTGAATGAGGTGCTGAATAGACTGTACCTGGCTATCCCAAC < 41bp 1 0.497921876732576 1 0.981438338756561 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 25 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1053032 chr10:1053036 nonsynonymous SNV 0.193 1 hm6A_associated_SNPs_77991 0 0 1 1 1053016 1053042 mRNA hsa-miR-148a GTPBP4 miRanda miRanda
14034 chr8 22052335 22052335 1 + G T UCEC 22052343 + 22052323 22052363 41 TGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC TGGCTATGAGAATCCTGATGACATCAAGAGCACGTCCAGCC < 41bp 1 0.590692324453275 1 0.952098250389099 experiment 0.81861535109345 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 13 BMP1 ENSG00000168487 CDS Human protein_coding chr8:22052343 chr8:22052335 nonsynonymous SNV 0.952 0 hm6A_associated_SNPs_78003 0 0 0 1 22052333 22052357 mRNA hsa-miR-187 BMP1 miRanda miRanda
14034 chr20 60963513 60963513 1 + G T UCEC 60963515 + 60963495 60963535 41 CTTTTCCCCTGGTTCTAGGAACTTTTGACTGGAGAGAATCA CTTTTCCCCTGGTTCTAGTAACTTTTGACTGGAGAGAATCA < 41bp 1 0.663992379375396 1 0.174710959196091 experiment 0.672015241249209 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 RPS21 ENSG00000171858 CDS Human protein_coding chr20:60963515 chr20:60963513 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_78023 0 0 1 1 60963497 60963516 mRNA hsa-miR-384 RPS21 miRanda miRanda
14034 chr20 60963513 60963513 1 + G T UCEC 60963522 + 60963502 60963542 41 CCTGGTTCTAGGAACTTTTGACTGGAGAGAATCACAGATGT CCTGGTTCTAGTAACTTTTGACTGGAGAGAATCACAGATGT < 41bp 1 0.256875842892248 1 0.207220643758774 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 12 RPS21 ENSG00000171858 CDS Human protein_coding chr20:60963522 chr20:60963513 nonsynonymous SNV 0.932 1 hm6A_associated_SNPs_78024 0 0 1 1 60963497 60963516 mRNA hsa-miR-384 RPS21 miRanda miRanda
14034 chr1 120906218 120906218 1 + C T UCEC 120906233 + 120906213 120906253 41 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCT CAAGGTCATGGGCATCATGAACTCCTTCGTCAACGACATCT < 41bp 1 0.108198401723472 1 0.999301970005035 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 HIST2H2BA ENSG00000223345 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:120906233 chr1:120906218 . . 0 hm6A_associated_SNPs_78064 0 0 0 3 120906209 120906233 mRNA hsa-miR-433 HIST2H2BA miRanda miRanda
14034 chr1 120906218 120906218 1 + C T UCEC 120906233 + 120906213 120906253 41 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCT CAAGGTCATGGGCATCATGAACTCCTTCGTCAACGACATCT < 41bp 1 0.108198401723472 1 0.999301970005035 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 HIST2H2BA ENSG00000223345 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:120906233 chr1:120906218 . . 0 hm6A_associated_SNPs_78064 0 0 0 3 120906209 120906231 mRNA hsa-miR-455-5p HIST2H2BA miRanda miRanda
14034 chr1 120906218 120906218 1 + C T UCEC 120906233 + 120906213 120906253 41 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCT CAAGGTCATGGGCATCATGAACTCCTTCGTCAACGACATCT < 41bp 1 0.108198401723472 1 0.999301970005035 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 6 HIST2H2BA ENSG00000223345 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:120906233 chr1:120906218 . . 0 hm6A_associated_SNPs_78064 0 0 0 3 120906207 120906227 mRNA hsa-miR-874 HIST2H2BA miRanda miRanda
14034 chr3 160120581 160120581 1 + A T UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCTCAGTATTATTACATAA < 41bp 1 0.318822678441429 1 0.9390669465065 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120581 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_78080 0 0 1 2 160120576 160120597 mRNA hsa-miR-361-5p SMC4 miRanda miRanda
14034 chr3 160120581 160120581 1 + A T UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCTCAGTATTATTACATAA < 41bp 1 0.318822678441429 1 0.9390669465065 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 34 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120581 nonsynonymous SNV 0.997 3 hm6A_associated_SNPs_78080 0 0 1 2 160120574 160120597 mRNA hsa-miR-383 SMC4 miRanda miRanda
14034 chr1 60309167 60309167 1 + C A UCEC 60309166 + 60309146 60309186 41 AATGAGATGATGAATGAAAAACTTGACCAGTTGGATGGCTC AATGAGATGATGAATGAAAAAATTGACCAGTTGGATGGCTC Direct Loss 1 0.282260595298204 1 0.228689521551132 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 22 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60309166 chr1:60309167 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_78099 0 0 1 1 60309151 60309173 mRNA hsa-miR-223 HOOK1 miRanda miRanda
14034 chr2 202149865 202149865 1 + G T UCEC 202149853 + 202149833 202149873 41 AGAAAGGTATACCTGTTGAGACTGATTCAGAGGAGCAACCC AGAAAGGTATACCTGTTGAGACTGATTCAGAGTAGCAACCC < 41bp 1 0.751880032130897 1 0.951622605323792 experiment 0.496239935738205 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 33 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149853 chr2:202149865 stopgain 0.001 0 hm6A_associated_SNPs_78105 0 0 1 1 202149854 202149875 mRNA hsa-miR-296-3p CASP8 miRanda miRanda
14034 chr18 12310959 12310959 1 + A G UCEC 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCGGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG < 41bp 1 0.466061186187812 1 0.876379787921906 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310959 nonsynonymous SNV 0.998 5 hm6A_associated_SNPs_78115 0 0 1 1 12310956 12310979 mRNA hsa-miR-224 TUBB6 miRanda miRanda
14034 chrX 149896224 149896224 1 + C A UCEC 149896232 + 149896212 149896252 41 TGGAGCACAGAGCCATGGAGACAATTCCTGTGGTATAGAGA TGGAGCACAGAGACATGGAGACAATTCCTGTGGTATAGAGA < 41bp 1 0.592388111463585 1 0.83188807964325 experiment 0.81522377707283 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 13 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149896232 chrX:149896224 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_78129 0 0 1 1 149896217 149896240 mRNA hsa-miR-613 MTMR1 miRanda miRanda
14034 chrX 77373624 77373624 1 + G A UCEC 77373610 + 77373590 77373630 41 TTTGATGAAGAAGGAGCTGAACTACTTTGCAAAGGCCTTGG TTTGATGAAGAAGGAGCTGAACTACTTTGCAAAGACCTTGG < 41bp 1 0.352376021303548 1 0.402622669935226 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373610 chrX:77373624 nonsynonymous SNV 0.991 5 hm6A_associated_SNPs_78141 0 0 1 2 77373617 77373642 mRNA hsa-miR-330-5p PGK1 miRanda miRanda
14034 chrX 77373624 77373624 1 + G A UCEC 77373610 + 77373590 77373630 41 TTTGATGAAGAAGGAGCTGAACTACTTTGCAAAGGCCTTGG TTTGATGAAGAAGGAGCTGAACTACTTTGCAAAGACCTTGG < 41bp 1 0.352376021303548 1 0.402622669935226 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 35 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373610 chrX:77373624 nonsynonymous SNV 0.991 5 hm6A_associated_SNPs_78141 0 0 1 2 77373623 77373642 mRNA hsa-miR-326 PGK1 miRanda miRanda
14034 chr2 61413604 61413604 1 + G A UCEC 61413584 + 61413564 61413604 41 TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATG TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATA < 41bp 1 0.423971809599891 1 0.816542029380798 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413584 chr2:61413604 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78166 0 0 1 2 61413593 61413613 mRNA hsa-miR-136 AHSA2 miRanda miRanda
14034 chr2 61413604 61413604 1 + G A UCEC 61413584 + 61413564 61413604 41 TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATG TTCCCCTCTCTTTTCAGTTAACAAATAAGAAGATCATCATA < 41bp 1 0.423971809599891 1 0.816542029380798 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413584 chr2:61413604 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78166 0 0 1 2 61413585 61413606 mRNA hsa-miR-433 AHSA2 miRanda miRanda
14034 chrX 69649531 69649531 1 + G T UCEC 69649523 + 69649503 69649543 41 ATGACACTTTTGTGATCCAGACATTGGAGACTGTGCTGAAT ATGACACTTTTGTGATCCAGACATTGGATACTGTGCTGAAT < 41bp 1 0.576921672922086 1 0.82177734375 experiment 0.846156654155827 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 GDPD2 ENSG00000130055 CDS Human protein_coding chrX:69649523 chrX:69649531 nonsynonymous SNV 0.976 0 hm6A_associated_SNPs_78202 0 0 0 1 69649529 69649550 mRNA hsa-miR-205 GDPD2 miRanda miRanda
14034 chrX 73040666 73040666 1 - A T UCEC 73040660 - 73040640 73040680 41 GAAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATC GAAGACTCTTGAACATGTGAACTGATGTGAAATGCAGAATC < 41bp 1 0.24529944268183 1 0.924686253070831 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040660 chrX:73040666 . . 0 hm6A_associated_SNPs_78203 0 0 1 1 73040660 73040683 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chrX 73040666 73040666 1 - A T UCEC 73040668 - 73040648 73040688 41 GATAAATGGAAGACTCTTGAACTTGTGAACTGATGTGAAAT GATAAATGGAAGACTCTTGAACATGTGAACTGATGTGAAAT < 41bp 1 0.472283318626523 1 0.904657602310181 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 23 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040668 chrX:73040666 . . 0 hm6A_associated_SNPs_78204 0 0 1 1 73040660 73040683 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chrX 73040666 73040666 1 - A T UCEC 73040676 - 73040656 73040696 41 AAAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGA AAAGCTAAGATAAATGGAAGACTCTTGAACATGTGAACTGA < 41bp 1 0.337413255353684 1 0.814943313598633 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 31 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040676 chrX:73040666 . . 0 hm6A_associated_SNPs_78205 0 0 1 1 73040660 73040683 lncRNA hsa-miR-513b-5p XIST miRanda starBase2
14034 chr8 25364454 25364454 1 + G T UCEC 25364461 + 25364441 25364481 41 TAAAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG TAAAATTTCACCATATTTAAACATAAAGTGTGAAAGAAAGG < 41bp 1 0.730968557164068 1 0.977222442626953 experiment 0.538062885671864 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364461 chr8:25364454 nonsynonymous SNV 0.000 2 hm6A_associated_SNPs_78277 0 0 1 3 25364431 25364456 mRNA hsa-miR-138 CDCA2 miRanda miRanda
14034 chr8 25364454 25364454 1 + G T UCEC 25364461 + 25364441 25364481 41 TAAAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG TAAAATTTCACCATATTTAAACATAAAGTGTGAAAGAAAGG < 41bp 1 0.730968557164068 1 0.977222442626953 experiment 0.538062885671864 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364461 chr8:25364454 nonsynonymous SNV 0.000 2 hm6A_associated_SNPs_78277 0 0 1 3 25364434 25364455 mRNA hsa-miR-125a-3p CDCA2 miRanda miRanda
14034 chr8 25364454 25364454 1 + G T UCEC 25364461 + 25364441 25364481 41 TAAAATTTCACCAGATTTAAACATAAAGTGTGAAAGAAAGG TAAAATTTCACCATATTTAAACATAAAGTGTGAAAGAAAGG < 41bp 1 0.730968557164068 1 0.977222442626953 experiment 0.538062885671864 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364461 chr8:25364454 nonsynonymous SNV 0.000 2 hm6A_associated_SNPs_78277 0 0 1 3 25364453 25364474 mRNA hsa-miR-377 CDCA2 miRanda miRanda
14034 chr17 7162177 7162177 1 + T C UCEC 7162166 + 7162146 7162186 41 TGGATCCCACAACTCATTTGACCTTTAACCTTCACCTGTCC TGGATCCCACAACTCATTTGACCTTTAACCTCCACCTGTCC < 41bp 1 0.730351286941756 1 0.0254535973072052 experiment 0.539297426116488 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 ELP5 ENSG00000170291 CDS Human protein_coding chr17:7162166 chr17:7162177 synonymous SNV . 0 hm6A_associated_SNPs_78294 0 0 1 1 7162162 7162184 mRNA hsa-miR-125a-3p C17orf81 miRanda miRanda
14034 chr5 112203222 112203222 1 + G T UCEC 112203234 + 112203214 112203254 41 AAAGGAAAGAAAAAGAAGTAACCTAGTATCAGCATCAAGTA AAAGGAAATAAAAAGAAGTAACCTAGTATCAGCATCAAGTA < 41bp 1 0.521698488162652 1 0.362173557281494 experiment 0.956603023674697 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 SRP19 ENSG00000153037 CDS Human protein_coding chr5:112203234 chr5:112203222 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_78314 0 0 1 1 112203217 112203238 mRNA hsa-miR-154 SRP19 miRanda miRanda
14034 chr2 71654500 71654500 1 + T A UCEC 71654520 + 71654500 71654540 41 TTATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA ATATGGAAGAAGATCTAAAAACCATGATTGAAAGACACTTA < 41bp 1 0.545931938970058 1 0.971381783485413 experiment 0.908136122059884 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 1 ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654520 chr2:71654500 nonsynonymous SNV 0.870 2 hm6A_associated_SNPs_78356 0 0 1 1 71654482 71654502 mRNA hsa-miR-543 ZNF638 miRanda miRanda
14034 chr19 49517808 49517808 1 + G A UCEC 49517794 + 49517774 49517814 41 CATCCCCATAGACCTGCTGGACCGGCTGCTTATCGTCTCCA CATCCCCATAGACCTGCTGGACCGGCTGCTTATCATCTCCA < 41bp 1 0.455636039973741 1 0.971893846988678 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 35 RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49517794 chr19:49517808 nonsynonymous SNV 0.871 0 hm6A_associated_SNPs_78368 0 0 1 1 49517792 49517814 mRNA hsa-miR-185 RUVBL2 miRanda miRanda
14034 chr12 98925596 98925596 1 + G T UCEC 98925593 + 98925573 98925613 41 GAATGGAAGTAATGATTCTGACAGATACAGTGACAATGAAG GAATGGAAGTAATGATTCTGACATATACAGTGACAATGAAG < 41bp 1 0.669850808064464 1 0.956429004669189 experiment 0.660298383871072 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925593 chr12:98925596 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78388 0 0 1 2 98925589 98925610 mRNA hsa-miR-25 TMPO miRanda miRanda
14034 chr12 98925596 98925596 1 + G T UCEC 98925593 + 98925573 98925613 41 GAATGGAAGTAATGATTCTGACAGATACAGTGACAATGAAG GAATGGAAGTAATGATTCTGACATATACAGTGACAATGAAG < 41bp 1 0.669850808064464 1 0.956429004669189 experiment 0.660298383871072 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925593 chr12:98925596 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78388 0 0 1 2 98925588 98925610 mRNA hsa-miR-363 TMPO miRanda miRanda
14034 chr12 98925596 98925596 1 + G T UCEC 98925605 + 98925585 98925625 41 TGATTCTGACAGATACAGTGACAATGAAGAAGGTAAAATTT TGATTCTGACATATACAGTGACAATGAAGAAGGTAAAATTT < 41bp 1 0.678790907934888 1 0.976354897022247 experiment 0.642418184130223 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925605 chr12:98925596 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78389 0 0 1 2 98925589 98925610 mRNA hsa-miR-25 TMPO miRanda miRanda
14034 chr12 98925596 98925596 1 + G T UCEC 98925605 + 98925585 98925625 41 TGATTCTGACAGATACAGTGACAATGAAGAAGGTAAAATTT TGATTCTGACATATACAGTGACAATGAAGAAGGTAAAATTT < 41bp 1 0.678790907934888 1 0.976354897022247 experiment 0.642418184130223 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 12 TMPO ENSG00000120802 CDS Human protein_coding chr12:98925605 chr12:98925596 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78389 0 0 1 2 98925588 98925610 mRNA hsa-miR-363 TMPO miRanda miRanda
14034 chr9 32407377 32407377 1 + G T UCEC 32407379 + 32407359 32407399 41 GAATGTCACGCAGCACAAGAACATAGAAGTGCCATTTAAGC GAATGTCACGCAGCACAATAACATAGAAGTGCCATTTAAGC < 41bp 1 0.740979673557371 1 0.443277269601822 experiment 0.518040652885259 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 19 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32407379 chr9:32407377 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_78444 0 0 1 1 32407373 32407394 mRNA hsa-miR-183 ACO1 miRanda miRanda
14034 chr12 111070324 111070324 1 + G A UCEC 111070331 + 111070311 111070351 41 TGAGATTTCCTTCGTCCCTGACATCATCTCTGTGCACTGAT TGAGATTTCCTTCATCCCTGACATCATCTCTGTGCACTGAT < 41bp 1 0.426460776257904 1 0.125009030103683 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 14 TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111070331 chr12:111070324 synonymous SNV . 0 hm6A_associated_SNPs_78476 0 0 1 1 111070320 111070341 mRNA hsa-miR-143 TCTN1 miRanda miRanda
14034 chr4 185599473 185599473 1 + A T UCEC 185599470 + 185599450 185599490 41 TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGT TTTGGAGGTTACTGAAGATAACATATTTTTTCCTATACAGT < 41bp 1 0.512464264960811 1 0.0191790163516998 experiment 0.975071470078378 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 24 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185599470 chr4:185599473 nonsynonymous SNV 0.035 1 hm6A_associated_SNPs_78487 0 0 1 1 185599473 185599494 mRNA hsa-miR-134 CCDC111 miRanda miRanda
14034 chr16 71674575 71674575 1 + C T UCEC 71674574 + 71674554 71674594 41 TCCAAGGAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGG TCCAAGGAGCCAAGAGTCGAATAATGTTGTCAGGGAAGTGG Direct Loss 1 0.515861343480191 1 0.984150886535645 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 22 MARVELD3 ENSG00000140832 CDS Human protein_coding chr16:71674574 chr16:71674575 nonsynonymous SNV 0.005 1 hm6A_associated_SNPs_78552 0 0 0 1 71674554 71674578 mRNA hsa-miR-375 MARVELD3 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358065 89358088 mRNA hsa-miR-15a HERC6 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358066 89358088 mRNA hsa-miR-16 HERC6 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358065 89358087 mRNA hsa-miR-103 HERC6 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358065 89358087 mRNA hsa-miR-107 HERC6 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358065 89358088 mRNA hsa-miR-15b HERC6 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358067 89358088 mRNA hsa-miR-195 HERC6 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358069 89358088 mRNA hsa-miR-424 HERC6 miRanda miRanda
14034 chr4 89358081 89358081 1 + T C UCEC 89358092 + 89358072 89358112 41 TCTAGATGATGCTGCTGATGACATTGGAGATGCGCTCTGCA TCTAGATGACGCTGCTGATGACATTGGAGATGCGCTCTGCA < 41bp 1 0.522953766724076 1 0.0277292132377625 experiment 0.954092466551848 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC6 ENSG00000138642 CDS Human protein_coding chr4:89358092 chr4:89358081 synonymous SNV . 0 hm6A_associated_SNPs_78576 0 0 0 8 89358066 89358088 mRNA hsa-miR-497 HERC6 miRanda miRanda
14034 chr20 18462382 18462382 1 + G T UCEC 18462376 + 18462356 18462396 41 ACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGC ACAGTTGGCAGTGTAGATGGACACATTAAACTGTACAGGGC < 41bp 1 0.76536579699366 1 0.849767208099365 experiment 0.46926840601268 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462376 chr20:18462382 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_78629 0 0 1 2 18462374 18462395 mRNA hsa-miR-486-5p POLR3F miRanda miRanda
14034 chr20 18462382 18462382 1 + G T UCEC 18462376 + 18462356 18462396 41 ACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGC ACAGTTGGCAGTGTAGATGGACACATTAAACTGTACAGGGC < 41bp 1 0.76536579699366 1 0.849767208099365 experiment 0.46926840601268 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462376 chr20:18462382 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_78629 0 0 1 2 18462377 18462398 mRNA hsa-miR-874 POLR3F miRanda miRanda
14034 chr5 134106675 134106675 1 + G T UCEC 134106658 + 134106638 134106678 41 GAAGAAAAAAGACAAAGATGACAAGGAGGATGAAAAAGAAA GAAGAAAAAAGACAAAGATGACAAGGAGGATGAAAAATAAA < 41bp 1 0.738669848031996 1 0.00591817498207092 experiment 0.522660303936008 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 38 DDX46 ENSG00000145833 CDS Human protein_coding chr5:134106658 chr5:134106675 stopgain 1.000 0 hm6A_associated_SNPs_78672 0 0 1 1 134106668 134106689 mRNA hsa-miR-338-3p DDX46 miRanda miRanda
14034 chr14 76620936 76620936 1 + G A UCEC 76620953 + 76620933 76620973 41 GTCGAGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGAT GTCAAGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGAT < 41bp 1 0.637269928361763 1 0.984624087810516 experiment 0.725460143276473 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76620953 chr14:76620936 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_78677 0 0 1 1 76620934 76620958 mRNA hsa-miR-96 C14orf118 miRanda miRanda
14034 chr19 37880415 37880415 1 + T G UCEC 37880396 + 37880376 37880416 41 TGGGAAGTTTTTTAGGACTGACTCACAACTTAATCGACATC TGGGAAGTTTTTTAGGACTGACTCACAACTTAATCGACAGC < 41bp 1 0.542558427679332 1 0.999928116798401 experiment 0.914883144641336 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 ZNF527 ENSG00000189164 CDS Human protein_coding chr19:37880396 chr19:37880415 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_78702 0 0 1 2 37880411 37880433 mRNA hsa-miR-199a-5p ZNF527 miRanda miRanda
14034 chr19 37880415 37880415 1 + T G UCEC 37880396 + 37880376 37880416 41 TGGGAAGTTTTTTAGGACTGACTCACAACTTAATCGACATC TGGGAAGTTTTTTAGGACTGACTCACAACTTAATCGACAGC < 41bp 1 0.542558427679332 1 0.999928116798401 experiment 0.914883144641336 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 40 ZNF527 ENSG00000189164 CDS Human protein_coding chr19:37880396 chr19:37880415 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_78702 0 0 1 2 37880410 37880433 mRNA hsa-miR-199b-5p ZNF527 miRanda miRanda
14034 chrX 114864216 114864216 1 + T C UCEC 114864234 + 114864214 114864254 41 TGTTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG TGCTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG < 41bp 1 0.431184976153813 1 0.167342722415924 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114864234 chrX:114864216 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_78723 0 0 1 6 114864198 114864222 mRNA hsa-miR-30c PLS3 miRanda miRanda
14034 chrX 114864216 114864216 1 + T C UCEC 114864234 + 114864214 114864254 41 TGTTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG TGCTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG < 41bp 1 0.431184976153813 1 0.167342722415924 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114864234 chrX:114864216 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_78723 0 0 1 6 114864197 114864218 mRNA hsa-miR-212 PLS3 miRanda miRanda
14034 chrX 114864216 114864216 1 + T C UCEC 114864234 + 114864214 114864254 41 TGTTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG TGCTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG < 41bp 1 0.431184976153813 1 0.167342722415924 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114864234 chrX:114864216 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_78723 0 0 1 6 114864199 114864222 mRNA hsa-miR-30b PLS3 miRanda miRanda
14034 chrX 114864216 114864216 1 + T C UCEC 114864234 + 114864214 114864254 41 TGTTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG TGCTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG < 41bp 1 0.431184976153813 1 0.167342722415924 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114864234 chrX:114864216 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_78723 0 0 1 6 114864196 114864218 mRNA hsa-miR-132 PLS3 miRanda miRanda
14034 chrX 114864216 114864216 1 + T C UCEC 114864234 + 114864214 114864254 41 TGTTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG TGCTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG < 41bp 1 0.431184976153813 1 0.167342722415924 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114864234 chrX:114864216 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_78723 0 0 1 6 114864212 114864233 mRNA hsa-miR-296-3p PLS3 miRanda miRanda
14034 chrX 114864216 114864216 1 + T C UCEC 114864234 + 114864214 114864254 41 TGTTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG TGCTATACCAATGAACCCTAACACCGATGACCTGTTCAAAG < 41bp 1 0.431184976153813 1 0.167342722415924 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 3 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114864234 chrX:114864216 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_78723 0 0 1 6 114864202 114864222 mRNA hsa-miR-410 PLS3 miRanda miRanda
14034 chrX 118587017 118587017 1 + C A UCEC 118587001 + 118586981 118587021 41 AAGTTCTTCAAAACGAGAAAACCGAAGCCTAAAAAACCAAC AAGTTCTTCAAAACGAGAAAACCGAAGCCTAAAAAAACAAC < 41bp 1 0.666362388576954 1 0.832335948944092 experiment 0.667275222846092 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587001 chrX:118587017 nonsynonymous SNV 0.950 1 hm6A_associated_SNPs_78753 0 0 1 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chrX 118587017 118587017 1 + C A UCEC 118587016 + 118586996 118587036 41 AGAAAACCGAAGCCTAAAAAACCAACTCTATAAAATGGAAT AGAAAACCGAAGCCTAAAAAAACAACTCTATAAAATGGAAT Direct Loss 1 0.706698339628798 1 0.952591478824615 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 22 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587016 chrX:118587017 nonsynonymous SNV 0.950 1 hm6A_associated_SNPs_78754 0 0 1 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chr8 32621643 32621643 1 + G T UCEC 32621645 + 32621625 32621665 41 ATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATT ATAGCCGGCGGGCCAAAATAACCAAGCCCAATGGCCACATT < 41bp 1 0.472241631831666 1 0.998851358890533 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 19 NRG1 ENSG00000157168 CDS Human protein_coding chr8:32621645 chr8:32621643 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_78780 0 0 0 1 32621643 32621665 mRNA hsa-miR-455-5p NRG1 miRanda miRanda
14034 chr5 74016271 74016271 1 + A G UCEC 74016269 + 74016249 74016289 41 TTAGGTACTCAGAAACAGAAACAACTTTTCATTGGTGGAGA TTAGGTACTCAGAAACAGAAACGACTTTTCATTGGTGGAGA Direct Loss 1 0.229619569648685 1 0.407303005456924 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 23 HEXB ENSG00000049860 CDS Human protein_coding chr5:74016269 chr5:74016271 nonsynonymous SNV 0.981 1 hm6A_associated_SNPs_78782 0 0 1 1 74016255 74016276 mRNA hsa-miR-382 HEXB miRanda miRanda
14034 chr17 36517611 36517611 1 + G T UCEC 36517607 + 36517587 36517627 41 TCCCTAGGAAACCCAAGTTGACAAGAACTCAAAGTGCCTTT TCCCTAGGAAACCCAAGTTGACAATAACTCAAAGTGCCTTT < 41bp 1 0.491521753938398 1 0.000198096036911011 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SOCS7 ENSG00000174111 CDS Human other chr17:36517607 chr17:36517611 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78824 0 0 1 2 36517608 36517627 mRNA hsa-miR-124 SOCS7 miRanda miRanda
14034 chr17 36517611 36517611 1 + G T UCEC 36517607 + 36517587 36517627 41 TCCCTAGGAAACCCAAGTTGACAAGAACTCAAAGTGCCTTT TCCCTAGGAAACCCAAGTTGACAATAACTCAAAGTGCCTTT < 41bp 1 0.491521753938398 1 0.000198096036911011 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 25 SOCS7 ENSG00000174111 CDS Human other chr17:36517607 chr17:36517611 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_78824 0 0 1 2 36517610 36517627 mRNA hsa-miR-506 SOCS7 miRanda miRanda
14034 chr5 74892750 74892750 1 + T G UCEC 74892735 + 74892715 74892755 41 AGCAAGTCTTTTAATATTGAACACTGTCATCAGAATTCTTC AGCAAGTCTTTTAATATTGAACACTGTCATCAGAAGTCTTC < 41bp 1 0.767436034904255 1 0.976749241352081 experiment 0.46512793019149 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 POLK ENSG00000122008 CDS Human protein_coding chr5:74892735 chr5:74892750 nonsynonymous SNV 0.986 0 hm6A_associated_SNPs_78834 0 0 1 2 74892742 74892765 mRNA hsa-miR-376c POLK miRanda miRanda
14034 chr5 74892750 74892750 1 + T G UCEC 74892735 + 74892715 74892755 41 AGCAAGTCTTTTAATATTGAACACTGTCATCAGAATTCTTC AGCAAGTCTTTTAATATTGAACACTGTCATCAGAAGTCTTC < 41bp 1 0.767436034904255 1 0.976749241352081 experiment 0.46512793019149 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 POLK ENSG00000122008 CDS Human protein_coding chr5:74892735 chr5:74892750 nonsynonymous SNV 0.986 0 hm6A_associated_SNPs_78834 0 0 1 2 74892746 74892768 mRNA hsa-miR-494 POLK miRanda miRanda
14034 chr1 155110724 155110724 1 + G A UCEC 155110735 + 155110715 155110755 41 CCCCCAGGAGCAAGACAGGAACTACTGGCTCCTGCAAACCT CCCCCAGGAACAAGACAGGAACTACTGGCTCCTGCAAACCT < 41bp 1 0.707636677459495 1 0.823116302490234 experiment 0.58472664508101 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 SLC50A1 ENSG00000169241 CDS Human protein_coding chr1:155110735 chr1:155110724 synonymous SNV . 0 hm6A_associated_SNPs_78841 0 0 1 1 155110711 155110731 mRNA hsa-miR-431 RAG1AP1 miRanda miRanda
14034 chrX 73045669 73045669 1 - T C UCEC 73045685 - 73045665 73045705 41 GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGC GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGGAAGC < 41bp 1 0.398971239026928 1 0.213805258274078 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045685 chrX:73045669 . . 0 hm6A_associated_SNPs_78891 0 0 1 3 73045661 73045682 lncRNA hsa-miR-520f-3p XIST miRanda starBase2
14034 chrX 73045669 73045669 1 - T C UCEC 73045685 - 73045665 73045705 41 GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGC GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGGAAGC < 41bp 1 0.398971239026928 1 0.213805258274078 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045685 chrX:73045669 . . 0 hm6A_associated_SNPs_78891 0 0 1 3 73045668 73045689 lncRNA hsa-miR-485-3p XIST miRanda starBase2
14034 chrX 73045669 73045669 1 - T C UCEC 73045685 - 73045665 73045705 41 GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGC GTGGGAAGTTGATTTAAATGACTGATAATGTGTATGGAAGC < 41bp 1 0.398971239026928 1 0.213805258274078 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 37 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045685 chrX:73045669 . . 0 hm6A_associated_SNPs_78891 0 0 1 3 73045668 73045689 lncRNA hsa-miR-539-3p XIST miRanda starBase2
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRA@ miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAV20 miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRDV2 miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAJ17 miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020838 23020859 mRNA hsa-miR-330-5p TRAC miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRA@ miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAV20 miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRDV2 miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAJ17 miRanda miRanda
14034 chr14 23020847 23020847 1 + T C UCEC 23020859 + 23020839 23020879 41 TTCCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAG TTCCCTCCCGCTCCCCAGAGACTGCCTCCGCCATCCCACAG < 41bp 1 0.237193382505343 1 0.869812488555908 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 9 OR4E1;LINC02332 ENSG00000229164 UTR3 Human other chr14:23020859 chr14:23020847 . . 0 hm6A_associated_SNPs_78930 0 0 0 10 23020840 23020859 mRNA hsa-miR-326 TRAC miRanda miRanda
14034 chr13 73357649 73357649 1 + C A UCEC 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAAAAAAGTGAACATATCTAGTTCTCTGGAAT < 41bp 1 0.388855238006347 1 0.841975808143616 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357649 synonymous SNV . 0 hm6A_associated_SNPs_78956 0 0 1 3 73357636 73357660 mRNA hsa-miR-146a PIBF1 miRanda miRanda
14034 chr13 73357649 73357649 1 + C A UCEC 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAAAAAAGTGAACATATCTAGTTCTCTGGAAT < 41bp 1 0.388855238006347 1 0.841975808143616 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357649 synonymous SNV . 0 hm6A_associated_SNPs_78956 0 0 1 3 73357636 73357660 mRNA hsa-miR-146b-5p PIBF1 miRanda miRanda
14034 chr13 73357649 73357649 1 + C A UCEC 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAAAAAAGTGAACATATCTAGTTCTCTGGAAT < 41bp 1 0.388855238006347 1 0.841975808143616 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 25 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357649 synonymous SNV . 0 hm6A_associated_SNPs_78956 0 0 1 3 73357641 73357662 mRNA hsa-miR-873 PIBF1 miRanda miRanda
14034 chr5 7885944 7885944 1 + T G UCEC 7885953 + 7885933 7885973 41 CCTTTTGAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA CCTTTTGAAAAGAAAGGCAGACACAAAGAAGAAAGGTAACA < 41bp 1 0.472394535398043 1 0.956825852394104 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 12 MTRR ENSG00000124275 CDS Human protein_coding chr5:7885953 chr5:7885944 nonsynonymous SNV 0.062 1 hm6A_associated_SNPs_79016 0 0 1 2 7885933 7885955 mRNA hsa-miR-346 MTRR miRanda miRanda
14034 chr5 7885944 7885944 1 + T G UCEC 7885953 + 7885933 7885973 41 CCTTTTGAAAATAAAGGCAGACACAAAGAAGAAAGGTAACA CCTTTTGAAAAGAAAGGCAGACACAAAGAAGAAAGGTAACA < 41bp 1 0.472394535398043 1 0.956825852394104 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 12 MTRR ENSG00000124275 CDS Human protein_coding chr5:7885953 chr5:7885944 nonsynonymous SNV 0.062 1 hm6A_associated_SNPs_79016 0 0 1 2 7885938 7885959 mRNA hsa-miR-599 MTRR miRanda miRanda
14034 chr2 238680762 238680762 1 + G T UCEC 238680776 + 238680756 238680796 41 ACAGAAGATTGGCAAACTAGACAATCTTCGATCTGAAGATG ACAGAATATTGGCAAACTAGACAATCTTCGATCTGAAGATG < 41bp 1 0.704997105187782 1 0.921846091747284 experiment 0.590005789624436 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238680776 chr2:238680762 nonsynonymous SNV 0.958 3 hm6A_associated_SNPs_79068 0 0 1 2 238680762 238680782 mRNA hsa-miR-219-5p LRRFIP1 miRanda miRanda
14034 chr2 238680762 238680762 1 + G T UCEC 238680776 + 238680756 238680796 41 ACAGAAGATTGGCAAACTAGACAATCTTCGATCTGAAGATG ACAGAATATTGGCAAACTAGACAATCTTCGATCTGAAGATG < 41bp 1 0.704997105187782 1 0.921846091747284 experiment 0.590005789624436 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 7 LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238680776 chr2:238680762 nonsynonymous SNV 0.958 3 hm6A_associated_SNPs_79068 0 0 1 2 238680756 238680778 mRNA hsa-miR-223 LRRFIP1 miRanda miRanda
14034 chr10 89268226 89268226 1 + A C UCEC 89268215 + 89268195 89268235 41 ATCACGTGGAAGCCTTCAAAACTGGACCAGAAATGCAGAAC ATCACGTGGAAGCCTTCAAAACTGGACCAGACATGCAGAAC < 41bp 1 0.235053427594034 1 0.970656156539917 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 32 MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89268215 chr10:89268226 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_79116 0 0 1 1 89268213 89268235 mRNA hsa-miR-544 MINPP1 miRanda miRanda
14034 chr8 124096440 124096440 1 + T G UCEC 124096433 + 124096413 124096453 41 CTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTC CTAGTTAGCTGGATGAGAGGACATGAAGCATCAGTATTTTC < 41bp 1 0.508397742381264 1 0.341070473194122 experiment 0.983204515237472 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124096433 chr8:124096440 nonsynonymous SNV 0.559 1 hm6A_associated_SNPs_79118 0 0 1 3 124096430 124096451 mRNA hsa-miR-200b WDR67 miRanda miRanda
14034 chr8 124096440 124096440 1 + T G UCEC 124096433 + 124096413 124096453 41 CTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTC CTAGTTAGCTGGATGAGAGGACATGAAGCATCAGTATTTTC < 41bp 1 0.508397742381264 1 0.341070473194122 experiment 0.983204515237472 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124096433 chr8:124096440 nonsynonymous SNV 0.559 1 hm6A_associated_SNPs_79118 0 0 1 3 124096429 124096451 mRNA hsa-miR-200c WDR67 miRanda miRanda
14034 chr8 124096440 124096440 1 + T G UCEC 124096433 + 124096413 124096453 41 CTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTC CTAGTTAGCTGGATGAGAGGACATGAAGCATCAGTATTTTC < 41bp 1 0.508397742381264 1 0.341070473194122 experiment 0.983204515237472 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124096433 chr8:124096440 nonsynonymous SNV 0.559 1 hm6A_associated_SNPs_79118 0 0 1 3 124096431 124096451 mRNA hsa-miR-429 WDR67 miRanda miRanda
14034 chr15 31235126 31235126 1 + C A UCEC 31235110 + 31235090 31235130 41 TACCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTCTGTA TACCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTATGTA < 41bp 1 0.772609733612159 1 0.854712903499603 experiment 0.454780532775683 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 MTMR10 ENSG00000166912 CDS Human protein_coding chr15:31235110 chr15:31235126 nonsynonymous SNV 0.019 1 hm6A_associated_SNPs_79165 0 0 1 2 31235108 31235133 mRNA hsa-miR-361-5p MTMR15 miRanda miRanda
14034 chr15 31235126 31235126 1 + C A UCEC 31235110 + 31235090 31235130 41 TACCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTCTGTA TACCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTATGTA < 41bp 1 0.772609733612159 1 0.854712903499603 experiment 0.454780532775683 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 MTMR10 ENSG00000166912 CDS Human protein_coding chr15:31235110 chr15:31235126 nonsynonymous SNV 0.019 1 hm6A_associated_SNPs_79165 0 0 1 2 31235125 31235147 mRNA hsa-miR-506 MTMR15 miRanda miRanda
14034 chr1 162773259 162773259 1 + G T UCEC 162773269 + 162773249 162773289 41 GTACAGCATTGACCAATTTGACATATGGAATTCTGCCTCCG GTACAGCATTTACCAATTTGACATATGGAATTCTGCCTCCG < 41bp 1 0.703889917265188 1 0.13645339012146 experiment 0.592220165469623 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162773269 chr1:162773259 nonsynonymous SNV 0.126 1 hm6A_associated_SNPs_79173 0 0 0 1 162773240 162773265 mRNA hsa-miR-182 HSD17B7 miRanda miRanda
14034 chr1 33292123 33292123 1 + G T UCEC 33292139 + 33292119 33292159 41 AAAAGAATCTTATAAAAGTAACTGTTGCACCATTTAATCCA AAAATAATCTTATAAAAGTAACTGTTGCACCATTTAATCCA < 41bp 1 0.718940277826602 1 0.994002342224121 experiment 0.562119444346796 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 5 S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292139 chr1:33292123 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_79183 0 0 1 1 33292123 33292144 mRNA hsa-miR-101 S100PBP miRanda miRanda
14034 chr3 56653464 56653464 1 + G C UCEC 56653474 + 56653454 56653494 41 ATTTTATTCCGTATGTTCGAACAAATGAGATCTATTACCTT ATTTTATTCCCTATGTTCGAACAAATGAGATCTATTACCTT < 41bp 1 0.629147765492817 1 0.087740421295166 experiment 0.741704469014366 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 11 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56653474 chr3:56653464 synonymous SNV . 0 hm6A_associated_SNPs_79279 0 0 1 1 56653457 56653478 mRNA hsa-miR-375 CCDC66 miRanda miRanda
14034 chr14 95081057 95081057 1 + T C UCEC 95081067 + 95081047 95081087 41 GGGCCCATAATACCACCCTGACAGAGATTCTCAAAGGCCTC GGGCCCATAACACCACCCTGACAGAGATTCTCAAAGGCCTC < 41bp 1 0.403564983977553 1 0.988623380661011 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 11 SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95081067 chr14:95081057 synonymous SNV . 0 hm6A_associated_SNPs_79284 0 0 1 1 95081054 95081076 mRNA hsa-miR-216b SERPINA3 miRanda miRanda
14034 chr10 101515437 101515437 1 + G T UCEC 101515449 + 101515429 101515469 41 CCCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT CCCTAAAGTTAACAGATGTGACCAAAGTAAGGACTTTGAAT < 41bp 1 0.72269160789473 1 0.956376492977142 experiment 0.554616784210539 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 CUTC ENSG00000119929 CDS Human protein_coding chr10:101515449 chr10:101515437 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_79295 0 0 1 3 101515430 101515450 mRNA hsa-miR-23a CUTC miRanda miRanda
14034 chr10 101515437 101515437 1 + G T UCEC 101515449 + 101515429 101515469 41 CCCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT CCCTAAAGTTAACAGATGTGACCAAAGTAAGGACTTTGAAT < 41bp 1 0.72269160789473 1 0.956376492977142 experiment 0.554616784210539 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 CUTC ENSG00000119929 CDS Human protein_coding chr10:101515449 chr10:101515437 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_79295 0 0 1 3 101515423 101515450 mRNA hsa-miR-23b CUTC miRanda miRanda
14034 chr10 101515437 101515437 1 + G T UCEC 101515449 + 101515429 101515469 41 CCCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAAT CCCTAAAGTTAACAGATGTGACCAAAGTAAGGACTTTGAAT < 41bp 1 0.72269160789473 1 0.956376492977142 experiment 0.554616784210539 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 CUTC ENSG00000119929 CDS Human protein_coding chr10:101515449 chr10:101515437 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_79295 0 0 1 3 101515436 101515456 mRNA hsa-miR-9 CUTC miRanda miRanda
14034 chr17 16344694 16344694 1 + G A UCEC 16344713 + 16344693 16344733 41 AGAGGATGTCAGTCCCAAGGACCAGTAGCTGCCATCAGTTT AAAGGATGTCAGTCCCAAGGACCAGTAGCTGCCATCAGTTT < 41bp 1 0.260416066937981 1 0.699137568473816 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344713 chr17:16344694 . . 0 hm6A_associated_SNPs_79303 0 0 1 2 16344682 16344697 mRNA hsa-miR-330-5p NCRNA00188 miRanda miRanda
14034 chr17 16344694 16344694 1 + G A UCEC 16344713 + 16344693 16344733 41 AGAGGATGTCAGTCCCAAGGACCAGTAGCTGCCATCAGTTT AAAGGATGTCAGTCCCAAGGACCAGTAGCTGCCATCAGTTT < 41bp 1 0.260416066937981 1 0.699137568473816 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 2 LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344713 chr17:16344694 . . 0 hm6A_associated_SNPs_79303 0 0 1 2 16344682 16344697 mRNA hsa-miR-326 NCRNA00188 miRanda miRanda
14034 chr9 32420964 32420964 1 + C T UCEC 32420948 + 32420928 32420968 41 TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGGAG TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTATGGAG < 41bp 1 0.691834200988101 1 0.0705951452255249 experiment 0.616331598023797 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32420948 chr9:32420964 synonymous SNV . 0 hm6A_associated_SNPs_79321 0 0 0 2 32420956 32420979 mRNA hsa-miR-103 ACO1 miRanda miRanda
14034 chr9 32420964 32420964 1 + C T UCEC 32420948 + 32420928 32420968 41 TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTACGGAG TGACCGAGCTACGATTGCTAACATGTGTCCAGAGTATGGAG < 41bp 1 0.691834200988101 1 0.0705951452255249 experiment 0.616331598023797 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 37 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32420948 chr9:32420964 synonymous SNV . 0 hm6A_associated_SNPs_79321 0 0 0 2 32420956 32420979 mRNA hsa-miR-107 ACO1 miRanda miRanda
14034 chr16 30198402 30198402 1 + C T UCEC 30198413 + 30198393 30198433 41 GCACTGGGGCGGCCATGCTGACACTGGGCCCAGAGGTGCAC GCACTGGGGTGGCCATGCTGACACTGGGCCCAGAGGTGCAC < 41bp 1 0.638771323457688 1 0.94355320930481 experiment 0.722457353084624 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 10 CORO1A ENSG00000102879 CDS Human protein_coding chr16:30198413 chr16:30198402 nonsynonymous SNV 0.180 1 hm6A_associated_SNPs_79351 0 0 0 2 30198399 30198420 mRNA hsa-miR-199a-5p CORO1A miRanda miRanda
14034 chr16 30198402 30198402 1 + C T UCEC 30198413 + 30198393 30198433 41 GCACTGGGGCGGCCATGCTGACACTGGGCCCAGAGGTGCAC GCACTGGGGTGGCCATGCTGACACTGGGCCCAGAGGTGCAC < 41bp 1 0.638771323457688 1 0.94355320930481 experiment 0.722457353084624 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 10 CORO1A ENSG00000102879 CDS Human protein_coding chr16:30198413 chr16:30198402 nonsynonymous SNV 0.180 1 hm6A_associated_SNPs_79351 0 0 0 2 30198399 30198420 mRNA hsa-miR-199b-5p CORO1A miRanda miRanda
14034 chr10 27454440 27454440 1 + G A UCEC 27454433 + 27454413 27454453 41 TATGTCTGTAGATCAAAAGGACACTACGCCTTATTCTAGCA TATGTCTGTAGATCAAAAGGACACTACACCTTATTCTAGCA < 41bp 1 0.708071384731256 1 0.936855018138885 experiment 0.583857230537489 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 28 MASTL ENSG00000120539 CDS Human protein_coding chr10:27454433 chr10:27454440 synonymous SNV . 0 hm6A_associated_SNPs_79357 0 0 1 1 27454417 27454440 mRNA hsa-miR-142-3p MASTL miRanda miRanda
14034 chr18 12310983 12310983 1 + C T UCEC 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCAGGGCCGCCCTGGTGGACTTAGAGTCAGGCACCATGG < 41bp 1 0.466686413602092 1 0.841116905212402 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310983 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_79374 0 0 1 2 12310962 12310985 mRNA hsa-miR-24 TUBB6 miRanda miRanda
14034 chr18 12310983 12310983 1 + C T UCEC 12310975 + 12310955 12310995 41 GCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGG GCCCAGGGCCGCCCTGGTGGACTTAGAGTCAGGCACCATGG < 41bp 1 0.466686413602092 1 0.841116905212402 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310975 chr18:12310983 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_79374 0 0 1 2 12310965 12310987 mRNA hsa-miR-149 TUBB6 miRanda miRanda
14034 chr18 12310983 12310983 1 + C T UCEC 12310996 + 12310976 12311016 41 CTTAGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT CTTAGAGTCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT < 41bp 1 0.720058708621707 1 0.79418021440506 experiment 0.559882582756587 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 8 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310996 chr18:12310983 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_79375 0 0 1 2 12310962 12310985 mRNA hsa-miR-24 TUBB6 miRanda miRanda
14034 chr18 12310983 12310983 1 + C T UCEC 12310996 + 12310976 12311016 41 CTTAGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT CTTAGAGTCAGGCACCATGGACAGCGTGCGGTCTGGGCCTT < 41bp 1 0.720058708621707 1 0.79418021440506 experiment 0.559882582756587 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 8 TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12310996 chr18:12310983 nonsynonymous SNV 0.995 4 hm6A_associated_SNPs_79375 0 0 1 2 12310965 12310987 mRNA hsa-miR-149 TUBB6 miRanda miRanda
14034 chr13 113882348 113882348 1 + T C UCEC 113882353 + 113882333 113882373 41 TGCTGGCAGGACCACTGCAGACAAATGGTAAGCTTGTTCAC TGCTGGCAGGACCACCGCAGACAAATGGTAAGCTTGTTCAC < 41bp 1 0.648028792524844 1 0.172612100839615 experiment 0.703942414950311 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 CUL4A ENSG00000139842 CDS Human protein_coding chr13:113882353 chr13:113882348 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_79379 0 0 1 1 113882344 113882359 mRNA hsa-miR-433 CUL4A miRanda miRanda
14034 chr16 48296766 48296766 1 + G A UCEC 48296769 + 48296749 48296789 41 TATGGTAGAACTTCCTTGGAACAAAAGTACAACTGGTAAGC TATGGTAGAACTTCCTTAGAACAAAAGTACAACTGGTAAGC < 41bp 1 0.580433494962017 1 0.0213330090045929 experiment 0.839133010075966 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 18 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48296769 chr16:48296766 stopgain 1.000 1 hm6A_associated_SNPs_79429 0 0 1 2 48296766 48296783 mRNA hsa-miR-223 LONP2 miRanda miRanda
14034 chr16 48296766 48296766 1 + G A UCEC 48296769 + 48296749 48296789 41 TATGGTAGAACTTCCTTGGAACAAAAGTACAACTGGTAAGC TATGGTAGAACTTCCTTAGAACAAAAGTACAACTGGTAAGC < 41bp 1 0.580433494962017 1 0.0213330090045929 experiment 0.839133010075966 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 18 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48296769 chr16:48296766 stopgain 1.000 1 hm6A_associated_SNPs_79429 0 0 1 2 48296752 48296773 mRNA hsa-miR-375 LONP2 miRanda miRanda
14034 chr1 40525773 40525773 1 + G A UCEC 40525769 + 40525749 40525789 41 TCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGTCCTG TCCATATGTGCAGGCATTTGACTCACTGCTTGCTGGTCCTG < 41bp 1 0.262423730444841 1 0.13052037358284 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 25 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525769 chr1:40525773 synonymous SNV . 0 hm6A_associated_SNPs_79476 0 0 1 1 40525756 40525779 mRNA hsa-miR-503 CAP1 miRanda miRanda
14034 chr15 34521960 34521960 1 + G A UCEC 34521977 + 34521957 34521997 41 ATGGAGTTCAGTGGTGGAGGACTGCTTTTGTGAACATGAGA ATGAAGTTCAGTGGTGGAGGACTGCTTTTGTGAACATGAGA < 41bp 1 0.610920695415097 1 0.226541101932526 experiment 0.778158609169807 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34521977 chr15:34521960 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_79513 0 0 1 1 34521954 34521963 mRNA hsa-miR-136 TMEM85 miRanda miRanda
14034 chr7 98956027 98956027 1 + G A UCEC 98956022 + 98956002 98956042 41 TGTGTCATTTGTCTCAGAGAACAGCGTCGTGGCTGCTGTGA TGTGTCATTTGTCTCAGAGAACAGCATCGTGGCTGCTGTGA < 41bp 1 0.623194233912741 1 0.258150100708008 experiment 0.753611532174518 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 26 ARPC1A ENSG00000241685;ENSG00000241685 exonic;splicing Human other chr7:98956022 chr7:98956027 nonsynonymous SNV 0.708 0 hm6A_associated_SNPs_79553 0 0 1 1 98956018 98956038 mRNA hsa-miR-497 ARPC1A miRanda miRanda
14034 chr1 238090488 238090488 1 + C A UCEC 238090487 + 238090467 238090507 41 AGGCCAACAGAGAGAAGATGACTCAGATCATGTTTGAGACC AGGCCAACAGAGAGAAGATGAATCAGATCATGTTTGAGACC Direct Loss 1 0.213157577346918 1 0.99933910369873 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 22 LOC100130331 ENSG00000237250;ENSG00000243781 ncRNA_exonic Human other chr1:238090487 chr1:238090488 . . 0 hm6A_associated_SNPs_79554 0 0 0 1 238090483 238090505 mRNA hsa-miR-371-5p LOC100130331 miRanda miRanda
14034 chr2 135888230 135888230 1 + G A UCEC 135888234 + 135888214 135888254 41 GCAAAGAAGAAAATCCGAAAACACAGAGGTGTAGAGGAGTC GCAAAGAAGAAAATCCAAAAACACAGAGGTGTAGAGGAGTC < 41bp 1 0.799319559520625 1 0.0197195410728455 experiment 0.40136088095875 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 17 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135888234 chr2:135888230 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_79612 1 0 1 1 135888221 135888244 mRNA hsa-miR-10a RAB3GAP1 miRanda miRanda
14034 chr16 66600489 66600489 1 + G A UCEC 66600483 + 66600463 66600503 41 GGAACTTGAAACAACCGGAGACTGCCGCAGCCCTGGCAAGT GGAACTTGAAACAACCGGAGACTGCCACAGCCCTGGCAAGT < 41bp 1 0.672786095025196 1 0.967299401760101 experiment 0.654427809949608 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CMTM1 ENSG00000089505 CDS Human protein_coding chr16:66600483 chr16:66600489 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_79656 0 0 0 2 66600479 66600497 mRNA hsa-miR-214 CMTM1 miRanda miRanda
14034 chr16 66600489 66600489 1 + G A UCEC 66600483 + 66600463 66600503 41 GGAACTTGAAACAACCGGAGACTGCCGCAGCCCTGGCAAGT GGAACTTGAAACAACCGGAGACTGCCACAGCCCTGGCAAGT < 41bp 1 0.672786095025196 1 0.967299401760101 experiment 0.654427809949608 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 CMTM1 ENSG00000089505 CDS Human protein_coding chr16:66600483 chr16:66600489 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_79656 0 0 0 2 66600487 66600497 mRNA hsa-miR-499-5p CMTM1 miRanda miRanda
14034 chr3 160120572 160120572 1 + T A UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCACAGTATTAATACATAA < 41bp 1 0.28593069591976 1 0.922462046146393 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120572 nonsynonymous SNV 0.994 4 hm6A_associated_SNPs_79659 0 0 1 3 160120559 160120580 mRNA hsa-miR-200b SMC4 miRanda miRanda
14034 chr3 160120572 160120572 1 + T A UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCACAGTATTAATACATAA < 41bp 1 0.28593069591976 1 0.922462046146393 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120572 nonsynonymous SNV 0.994 4 hm6A_associated_SNPs_79659 0 0 1 3 160120559 160120580 mRNA hsa-miR-200c SMC4 miRanda miRanda
14034 chr3 160120572 160120572 1 + T A UCEC 160120568 + 160120548 160120588 41 CAAAAAATAAGATCTAAAAAACTCTCAGTATTAATACATAA CAAAAAATAAGATCTAAAAAACTCACAGTATTAATACATAA < 41bp 1 0.28593069591976 1 0.922462046146393 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 25 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160120568 chr3:160120572 nonsynonymous SNV 0.994 4 hm6A_associated_SNPs_79659 0 0 1 3 160120559 160120580 mRNA hsa-miR-429 SMC4 miRanda miRanda
14034 chr16 90233861 90233861 1 + T G UCEC 90233847 + 90233827 90233867 41 CCTCACAGTGGACCCTCCAGACTCAGATGGTGTCTCACTGT CCTCACAGTGGACCCTCCAGACTCAGATGGTGTCGCACTGT < 41bp 1 0.0687015300048787 1 0.985804617404938 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody 35 FAM157C ENSG00000260528;ENSG00000261172 ncRNA_intronic Human other chr16:90233847 chr16:90233861 . . 0 hm6A_associated_SNPs_79773 0 0 0 1 90233849 90233869 mRNA hsa-miR-128 LOC100132062 miRanda miRanda
14034 chr15 25332838 25332838 1 + C T UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTTCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.282675957403324 1 0.432458102703094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332838 . . 0 hm6A_associated_SNPs_79826 0 0 1 6 25332819 25332840 mRNA hsa-miR-1 SNORD116-21 miRanda miRanda
14034 chr15 25332838 25332838 1 + C T UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTTCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.282675957403324 1 0.432458102703094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332838 . . 0 hm6A_associated_SNPs_79826 0 0 1 6 25332815 25332840 mRNA hsa-miR-206 SNORD116-21 miRanda miRanda
14034 chr15 25332838 25332838 1 + C T UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTTCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.282675957403324 1 0.432458102703094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332838 . . 0 hm6A_associated_SNPs_79826 0 0 1 6 25332821 25332840 mRNA hsa-miR-613 SNORD116-21 miRanda miRanda
14034 chr15 25332838 25332838 1 + C T UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTTCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.282675957403324 1 0.432458102703094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332838 . . 0 hm6A_associated_SNPs_79826 0 0 1 6 25332819 25332840 lncRNA hsa-miR-1-3p AC124312.3 miRanda starBase2
14034 chr15 25332838 25332838 1 + C T UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTTCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.282675957403324 1 0.432458102703094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332838 . . 0 hm6A_associated_SNPs_79826 0 0 1 6 25332815 25332840 lncRNA hsa-miR-206 AC124312.3 miRanda starBase2
14034 chr15 25332838 25332838 1 + C T UCEC 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTTCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.282675957403324 1 0.432458102703094 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 7 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332838 . . 0 hm6A_associated_SNPs_79826 0 0 1 6 25332821 25332840 lncRNA hsa-miR-613 AC124312.3 miRanda starBase2
14034 chr17 61662609 61662609 1 + G A UCEC 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTATCGCCAGGTTAAACAACCATCGAGCATGTGTCA < 41bp 1 0.795121186611198 1 0.0114605724811554 experiment 0.409757626777604 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 8 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662609 nonsynonymous SNV 0.992 1 hm6A_associated_SNPs_79834 0 0 1 1 61662599 61662620 mRNA hsa-miR-490-3p DCAF7 miRanda miRanda
14034 chr14 105927287 105927287 1 + T G UCEC 105927274 + 105927254 105927294 41 ATATGGGAAGGATTTCACGGACATTCAGCAAGATTTTGTGA ATATGGGAAGGATTTCACGGACATTCAGCAAGAGTTTGTGA < 41bp 1 0.537308947147021 1 0.992533802986145 experiment 0.925382105705958 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 34 MTA1 ENSG00000182979 CDS Human protein_coding chr14:105927274 chr14:105927287 nonsynonymous SNV 0.965 3 hm6A_associated_SNPs_79884 0 0 1 1 105927272 105927290 mRNA hsa-miR-539 MTA1 miRanda miRanda
14034 chr9 119162211 119162211 1 + T A UCEC 119162217 + 119162197 119162237 41 GTTGAAAATAATTCTTTGAGACAGATTTCAGCTACCTCCCT GTTGAAAATAATTCATTGAGACAGATTTCAGCTACCTCCCT < 41bp 1 0.0323078188046474 1 0.0017583966255188 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 PAPPA-AS1 ENSG00000256040;ENSG00000182752 UTR5;UTR3 Human other chr9:119162217 chr9:119162211 . . 0 hm6A_associated_SNPs_79886 0 0 0 1 119162195 119162214 mRNA hsa-miR-186 PAPPA miRanda miRanda
14034 chr1 24975410 24975410 1 + C T UCEC 24975427 + 24975407 24975447 41 GCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG GCTTGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAG < 41bp 1 0.568339223188384 1 0.74262261390686 experiment 0.863321553623233 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24975427 chr1:24975410 stopgain 1.000 1 hm6A_associated_SNPs_79890 0 0 1 1 24975405 24975426 mRNA hsa-miR-150 SRRM1 miRanda miRanda
14034 chrX 41202490 41202490 1 + G T UCEC 41202506 + 41202486 41202526 41 GGGAGAAATTATCATGGGAAACATTGAGCTTACTCGTTATA GGGATAAATTATCATGGGAAACATTGAGCTTACTCGTTATA < 41bp 1 0.546872238916714 1 0.0841308534145355 experiment 0.906255522166572 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 5 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41202506 chrX:41202490 stopgain 1.000 1 hm6A_associated_SNPs_79902 0 0 1 2 41202470 41202491 mRNA hsa-miR-150 DDX3X miRanda miRanda
14034 chrX 41202490 41202490 1 + G T UCEC 41202506 + 41202486 41202526 41 GGGAGAAATTATCATGGGAAACATTGAGCTTACTCGTTATA GGGATAAATTATCATGGGAAACATTGAGCTTACTCGTTATA < 41bp 1 0.546872238916714 1 0.0841308534145355 experiment 0.906255522166572 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 5 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41202506 chrX:41202490 stopgain 1.000 1 hm6A_associated_SNPs_79902 0 0 1 2 41202482 41202503 mRNA hsa-miR-433 DDX3X miRanda miRanda
14034 chr7 135328025 135328025 1 + C A UCEC 135328039 + 135328019 135328059 41 TGATTTCTTCAGCTATTATGACAGTCATCGACAGAGTGTCA TGATTTATTCAGCTATTATGACAGTCATCGACAGAGTGTCA < 41bp 1 0.693337236246441 1 0.531015872955322 experiment 0.613325527507118 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 7 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328039 chr7:135328025 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_79917 0 0 1 1 135328022 135328044 mRNA hsa-miR-217 NUP205 miRanda miRanda
14034 chr13 31850889 31850889 1 + G T UCEC 31850881 + 31850861 31850901 41 ATATTTTTGTTGCAGTAAAAACATGCAAGAAATTTCATGGT ATATTTTTGTTGCAGTAAAAACATGCAATAAATTTCATGGT < 41bp 1 0.501261821389522 1 0.66254723072052 experiment 0.997476357220956 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 29 B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31850881 chr13:31850889 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_79923 0 0 0 1 31850866 31850892 mRNA hsa-miR-544 B3GALTL miRanda miRanda
14034 chr5 176732970 176732970 1 - C A UCEC 176732969 - 176732949 176732989 41 TCACCTGGACAGCTCTGGAGACACCAAATAAGCTAGAGGAG TCACCTGGACAGCTCTGGATACACCAAATAAGCTAGAGGAG Direct Loss 1 0.573761886580952 1 0.570338785648346 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 20 PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176732969 chr5:176732970 synonymous SNV . 0 hm6A_associated_SNPs_79954 0 0 1 2 176732955 176732976 mRNA hsa-miR-21 MXD3 miRanda miRanda
14034 chr5 176732970 176732970 1 - C A UCEC 176732969 - 176732949 176732989 41 TCACCTGGACAGCTCTGGAGACACCAAATAAGCTAGAGGAG TCACCTGGACAGCTCTGGATACACCAAATAAGCTAGAGGAG Direct Loss 1 0.573761886580952 1 0.570338785648346 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 20 PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176732969 chr5:176732970 synonymous SNV . 0 hm6A_associated_SNPs_79954 0 0 1 2 176732955 176732976 mRNA hsa-miR-590-5p MXD3 miRanda miRanda
14034 chr10 75520080 75520080 1 + G A UCEC 75520075 + 75520055 75520095 41 TGCCCCCTGGCACCCAGATGACTGGGCCCCTGGGACCACTG TGCCCCCTGGCACCCAGATGACTGGACCCCTGGGACCACTG < 41bp 1 0.377244758530463 1 0.63179337978363 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520075 chr10:75520080 synonymous SNV . 0 hm6A_associated_SNPs_79984 0 0 1 4 75520076 75520098 mRNA hsa-miR-34a SEC24C miRanda miRanda
14034 chr10 75520080 75520080 1 + G A UCEC 75520075 + 75520055 75520095 41 TGCCCCCTGGCACCCAGATGACTGGGCCCCTGGGACCACTG TGCCCCCTGGCACCCAGATGACTGGACCCCTGGGACCACTG < 41bp 1 0.377244758530463 1 0.63179337978363 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520075 chr10:75520080 synonymous SNV . 0 hm6A_associated_SNPs_79984 0 0 1 4 75520076 75520098 mRNA hsa-miR-34c-5p SEC24C miRanda miRanda
14034 chr10 75520080 75520080 1 + G A UCEC 75520075 + 75520055 75520095 41 TGCCCCCTGGCACCCAGATGACTGGGCCCCTGGGACCACTG TGCCCCCTGGCACCCAGATGACTGGACCCCTGGGACCACTG < 41bp 1 0.377244758530463 1 0.63179337978363 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520075 chr10:75520080 synonymous SNV . 0 hm6A_associated_SNPs_79984 0 0 1 4 75520077 75520098 mRNA hsa-miR-449a SEC24C miRanda miRanda
14034 chr10 75520080 75520080 1 + G A UCEC 75520075 + 75520055 75520095 41 TGCCCCCTGGCACCCAGATGACTGGGCCCCTGGGACCACTG TGCCCCCTGGCACCCAGATGACTGGACCCCTGGGACCACTG < 41bp 1 0.377244758530463 1 0.63179337978363 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520075 chr10:75520080 synonymous SNV . 0 hm6A_associated_SNPs_79984 0 0 1 4 75520077 75520098 mRNA hsa-miR-449b SEC24C miRanda miRanda
14034 chr15 79606321 79606321 1 + G A UCEC 79606316 + 79606296 79606336 41 TGAGCCTCCCATTCTCCCAGACATGGGGAACAGGGTCACAG TGAGCCTCCCATTCTCCCAGACATGAGGAACAGGGTCACAG < 41bp 1 0.581323394750431 1 0.60673713684082 experiment 0.837353210499138 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 26 TMED3 ENSG00000166557 CDS Human protein_coding chr15:79606316 chr15:79606321 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_80044 0 0 1 3 79606311 79606332 mRNA hsa-miR-10a TMED3 miRanda miRanda
14034 chr15 79606321 79606321 1 + G A UCEC 79606316 + 79606296 79606336 41 TGAGCCTCCCATTCTCCCAGACATGGGGAACAGGGTCACAG TGAGCCTCCCATTCTCCCAGACATGAGGAACAGGGTCACAG < 41bp 1 0.581323394750431 1 0.60673713684082 experiment 0.837353210499138 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 26 TMED3 ENSG00000166557 CDS Human protein_coding chr15:79606316 chr15:79606321 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_80044 0 0 1 3 79606311 79606332 mRNA hsa-miR-10b TMED3 miRanda miRanda
14034 chr15 79606321 79606321 1 + G A UCEC 79606316 + 79606296 79606336 41 TGAGCCTCCCATTCTCCCAGACATGGGGAACAGGGTCACAG TGAGCCTCCCATTCTCCCAGACATGAGGAACAGGGTCACAG < 41bp 1 0.581323394750431 1 0.60673713684082 experiment 0.837353210499138 Functional Loss 30867593;GSE121942;miCLIP;HepG2;Control 26 TMED3 ENSG00000166557 CDS Human protein_coding chr15:79606316 chr15:79606321 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_80044 0 0 1 3 79606311 79606333 mRNA hsa-miR-504 TMED3 miRanda miRanda
14034 chr15 79606321 79606321 1 + G A UCEC 79606325 + 79606305 79606345 41 CATTCTCCCAGACATGGGGAACAGGGTCACAGCTCTCACCC CATTCTCCCAGACATGAGGAACAGGGTCACAGCTCTCACCC < 41bp 1 0.474037088076346 1 0.359096586704254 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 17 TMED3 ENSG00000166557 CDS Human protein_coding chr15:79606325 chr15:79606321 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_80045 0 0 1 3 79606311 79606332 mRNA hsa-miR-10a TMED3 miRanda miRanda
14034 chr15 79606321 79606321 1 + G A UCEC 79606325 + 79606305 79606345 41 CATTCTCCCAGACATGGGGAACAGGGTCACAGCTCTCACCC CATTCTCCCAGACATGAGGAACAGGGTCACAGCTCTCACCC < 41bp 1 0.474037088076346 1 0.359096586704254 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 17 TMED3 ENSG00000166557 CDS Human protein_coding chr15:79606325 chr15:79606321 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_80045 0 0 1 3 79606311 79606332 mRNA hsa-miR-10b TMED3 miRanda miRanda
14034 chr15 79606321 79606321 1 + G A UCEC 79606325 + 79606305 79606345 41 CATTCTCCCAGACATGGGGAACAGGGTCACAGCTCTCACCC CATTCTCCCAGACATGAGGAACAGGGTCACAGCTCTCACCC < 41bp 1 0.474037088076346 1 0.359096586704254 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 17 TMED3 ENSG00000166557 CDS Human protein_coding chr15:79606325 chr15:79606321 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_80045 0 0 1 3 79606311 79606333 mRNA hsa-miR-504 TMED3 miRanda miRanda
14034 chr20 2637845 2637845 1 + G A UCEC 2637836 + 2637816 2637856 41 TGCCCTCGCGTCTTCAGAAAACAGCAGTAGTACTCCAGAGG TGCCCTCGCGTCTTCAGAAAACAGCAGTAATACTCCAGAGG < 41bp 1 0.481312951193381 1 0.99172306060791 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 30 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637836 chr20:2637845 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_80075 0 0 1 1 2637843 2637864 mRNA hsa-miR-342-3p NOP56 miRanda miRanda
14034 chr2 66775112 66775112 1 + C T UCEC 66775118 + 66775098 66775138 41 GAAAAAGCAGTTGGCACAAGACACGGGACTCACCATCCTTC GAAAAAGCAGTTGGTACAAGACACGGGACTCACCATCCTTC < 41bp 1 0.303882161774156 1 0.539219200611115 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66775118 chr2:66775112 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_80094 0 0 0 1 66775101 66775123 mRNA hsa-miR-187 MEIS1 miRanda miRanda
14034 chr7 65224229 65224229 1 + C T UCEC 65224218 + 65224198 65224238 41 TTTTGAGGACCTAAGTCCTGACTGCTTGAGACATGCAGGAC TTTTGAGGACCTAAGTCCTGACTGCTTGAGATATGCAGGAC < 41bp 1 0.11281305677463 1 0.000610530376434326 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224218 chr7:65224229 . . 0 hm6A_associated_SNPs_80126 0 0 1 2 65224222 65224245 mRNA hsa-miR-381 CCT6P1 miRanda miRanda
14034 chr7 65224229 65224229 1 + C T UCEC 65224218 + 65224198 65224238 41 TTTTGAGGACCTAAGTCCTGACTGCTTGAGACATGCAGGAC TTTTGAGGACCTAAGTCCTGACTGCTTGAGATATGCAGGAC < 41bp 1 0.11281305677463 1 0.000610530376434326 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 32 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224218 chr7:65224229 . . 0 hm6A_associated_SNPs_80126 0 0 1 2 65224224 65224245 mRNA hsa-miR-300 CCT6P1 miRanda miRanda
14034 chr7 65224229 65224229 1 + C T UCEC 65224228 + 65224208 65224248 41 CTAAGTCCTGACTGCTTGAGACATGCAGGACTTGTATATGA CTAAGTCCTGACTGCTTGAGATATGCAGGACTTGTATATGA Direct Loss 1 0.376385577597543 1 0.00193572044372559 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 22 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224228 chr7:65224229 . . 0 hm6A_associated_SNPs_80127 0 0 1 2 65224222 65224245 mRNA hsa-miR-381 CCT6P1 miRanda miRanda
14034 chr7 65224229 65224229 1 + C T UCEC 65224228 + 65224208 65224248 41 CTAAGTCCTGACTGCTTGAGACATGCAGGACTTGTATATGA CTAAGTCCTGACTGCTTGAGATATGCAGGACTTGTATATGA Direct Loss 1 0.376385577597543 1 0.00193572044372559 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 22 CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65224228 chr7:65224229 . . 0 hm6A_associated_SNPs_80127 0 0 1 2 65224224 65224245 mRNA hsa-miR-300 CCT6P1 miRanda miRanda
14034 chr2 160604591 160604591 1 + C T UCEC 160604596 + 160604576 160604616 41 AGGGTTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGA AGGGTTGTTTCATCTTAAAGACCATTTCAAGAATCTTCTGA < 41bp 1 0.577210123150133 1 0.952270984649658 experiment 0.845579753699735 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604596 chr2:160604591 stopgain 1.000 0 hm6A_associated_SNPs_80192 0 0 1 2 160604583 160604605 mRNA hsa-miR-203 MARCH7 miRanda miRanda
14034 chr2 160604591 160604591 1 + C T UCEC 160604596 + 160604576 160604616 41 AGGGTTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGA AGGGTTGTTTCATCTTAAAGACCATTTCAAGAATCTTCTGA < 41bp 1 0.577210123150133 1 0.952270984649658 experiment 0.845579753699735 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 16 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604596 chr2:160604591 stopgain 1.000 0 hm6A_associated_SNPs_80192 0 0 1 2 160604572 160604592 mRNA hsa-miR-143 MARCH7 miRanda miRanda
14034 chrX 74520748 74520748 1 + T C UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACACGGAGTTCAACCCAGTGT < 41bp 1 0.699211779119236 1 0.030366063117981 experiment 0.601576441761528 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520748 synonymous SNV . 0 hm6A_associated_SNPs_80196 0 0 1 4 74520746 74520767 mRNA hsa-miR-141 UPRT miRanda miRanda
14034 chrX 74520748 74520748 1 + T C UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACACGGAGTTCAACCCAGTGT < 41bp 1 0.699211779119236 1 0.030366063117981 experiment 0.601576441761528 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520748 synonymous SNV . 0 hm6A_associated_SNPs_80196 0 0 1 4 74520730 74520752 mRNA hsa-miR-145 UPRT miRanda miRanda
14034 chrX 74520748 74520748 1 + T C UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACACGGAGTTCAACCCAGTGT < 41bp 1 0.699211779119236 1 0.030366063117981 experiment 0.601576441761528 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520748 synonymous SNV . 0 hm6A_associated_SNPs_80196 0 0 1 4 74520747 74520767 mRNA hsa-miR-200a UPRT miRanda miRanda
14034 chrX 74520748 74520748 1 + T C UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACACGGAGTTCAACCCAGTGT < 41bp 1 0.699211779119236 1 0.030366063117981 experiment 0.601576441761528 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520748 synonymous SNV . 0 hm6A_associated_SNPs_80196 0 0 1 4 74520743 74520767 mRNA hsa-miR-490-3p UPRT miRanda miRanda
14034 chrX 74520750 74520750 1 + G T UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGTAGTTCAACCCAGTGT < 41bp 1 0.710918389303569 1 0.0429126024246216 experiment 0.578163221392861 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520750 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_80200 0 0 1 4 74520746 74520767 mRNA hsa-miR-141 UPRT miRanda miRanda
14034 chrX 74520750 74520750 1 + G T UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGTAGTTCAACCCAGTGT < 41bp 1 0.710918389303569 1 0.0429126024246216 experiment 0.578163221392861 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520750 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_80200 0 0 1 4 74520730 74520752 mRNA hsa-miR-145 UPRT miRanda miRanda
14034 chrX 74520750 74520750 1 + G T UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGTAGTTCAACCCAGTGT < 41bp 1 0.710918389303569 1 0.0429126024246216 experiment 0.578163221392861 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520750 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_80200 0 0 1 4 74520747 74520767 mRNA hsa-miR-200a UPRT miRanda miRanda
14034 chrX 74520750 74520750 1 + G T UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGTAGTTCAACCCAGTGT < 41bp 1 0.710918389303569 1 0.0429126024246216 experiment 0.578163221392861 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520750 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_80200 0 0 1 4 74520743 74520767 mRNA hsa-miR-490-3p UPRT miRanda miRanda
14034 chr15 28901118 28901118 1 + G A UCEC 28901129 + 28901109 28901149 41 AATCACCGTGCAGTTCTCTGACATGCGGACGTGTCGCGTTT AATCACCGTACAGTTCTCTGACATGCGGACGTGTCGCGTTT < 41bp 1 0.338111822309413 1 0.9891756772995 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901129 chr15:28901118 . . 0 hm6A_associated_SNPs_80212 0 0 0 2 28901106 28901127 mRNA hsa-miR-146a LOC440248 miRanda miRanda
14034 chr15 28901118 28901118 1 + G A UCEC 28901129 + 28901109 28901149 41 AATCACCGTGCAGTTCTCTGACATGCGGACGTGTCGCGTTT AATCACCGTACAGTTCTCTGACATGCGGACGTGTCGCGTTT < 41bp 1 0.338111822309413 1 0.9891756772995 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901129 chr15:28901118 . . 0 hm6A_associated_SNPs_80212 0 0 0 2 28901106 28901127 mRNA hsa-miR-146b-5p LOC440248 miRanda miRanda
14034 chr10 99359538 99359538 1 + G A UCEC 99359558 + 99359538 99359578 41 GAATATTGTGGGCATGAAGGACAGCGGTGGTGATGTGAGTG AAATATTGTGGGCATGAAGGACAGCGGTGGTGATGTGAGTG < 41bp 1 0.507005005840119 1 0.376292556524277 experiment 0.985989988319762 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 1 HOGA1 ENSG00000241935 CDS Human protein_coding chr10:99359558 chr10:99359538 synonymous SNV . 0 hm6A_associated_SNPs_80243 0 0 0 1 99359536 99359558 mRNA hsa-miR-205 DHDPSL miRanda miRanda
14034 chr15 85188760 85188760 1 - G A UCEC 85188741 - 85188721 85188761 41 ACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG ATCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG < 41bp 1 0.70913152697094 1 0.183714270591736 experiment 0.581736946058121 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188741 chr15:85188760 synonymous SNV . 0 hm6A_associated_SNPs_80260 0 0 1 3 85188737 85188760 mRNA hsa-miR-224 WDR73 miRanda miRanda
14034 chr15 85188760 85188760 1 - G A UCEC 85188741 - 85188721 85188761 41 ACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG ATCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG < 41bp 1 0.70913152697094 1 0.183714270591736 experiment 0.581736946058121 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188741 chr15:85188760 synonymous SNV . 0 hm6A_associated_SNPs_80260 0 0 1 3 85188753 85188772 mRNA hsa-miR-330-5p WDR73 miRanda miRanda
14034 chr15 85188760 85188760 1 - G A UCEC 85188741 - 85188721 85188761 41 ACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG ATCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG < 41bp 1 0.70913152697094 1 0.183714270591736 experiment 0.581736946058121 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 2 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188741 chr15:85188760 synonymous SNV . 0 hm6A_associated_SNPs_80260 0 0 1 3 85188753 85188772 mRNA hsa-miR-326 WDR73 miRanda miRanda
14034 chr15 85188760 85188760 1 - G A UCEC 85188761 - 85188741 85188781 41 AGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGA AGTATCCGTACCTAGCCCTGATCCAGAGCTGCTGCGAGTGA Direct Loss 1 0.469850738913734 1 0.201962113380432 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188761 chr15:85188760 synonymous SNV . 0 hm6A_associated_SNPs_80261 0 0 1 3 85188737 85188760 mRNA hsa-miR-224 WDR73 miRanda miRanda
14034 chr15 85188760 85188760 1 - G A UCEC 85188761 - 85188741 85188781 41 AGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGA AGTATCCGTACCTAGCCCTGATCCAGAGCTGCTGCGAGTGA Direct Loss 1 0.469850738913734 1 0.201962113380432 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188761 chr15:85188760 synonymous SNV . 0 hm6A_associated_SNPs_80261 0 0 1 3 85188753 85188772 mRNA hsa-miR-330-5p WDR73 miRanda miRanda
14034 chr15 85188760 85188760 1 - G A UCEC 85188761 - 85188741 85188781 41 AGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGA AGTATCCGTACCTAGCCCTGATCCAGAGCTGCTGCGAGTGA Direct Loss 1 0.469850738913734 1 0.201962113380432 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 22 WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188761 chr15:85188760 synonymous SNV . 0 hm6A_associated_SNPs_80261 0 0 1 3 85188753 85188772 mRNA hsa-miR-326 WDR73 miRanda miRanda
14034 chr17 6348463 6348463 1 + C T UCEC 6348450 + 6348430 6348470 41 GATGGCTTCTCGGTGGCAGAACATGGGGACCTCCGTGCGCC GATGGCTTCTCGGTGGCAGAACATGGGGACCTCTGTGCGCC < 41bp 1 0.464014861093332 1 0.986999154090881 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 34 PIMREG ENSG00000129195 CDS Human protein_coding chr17:6348450 chr17:6348463 synonymous SNV . 0 hm6A_associated_SNPs_80283 0 0 0 1 6348462 6348483 mRNA hsa-miR-185 FAM64A miRanda miRanda
14034 chr1 109301159 109301159 1 + G A UCEC 109301175 + 109301155 109301195 41 TTTTGCAAGTAAATCGGAGAACAAGTATAAAGCAGCATATA TTTTACAAGTAAATCGGAGAACAAGTATAAAGCAGCATATA < 41bp 1 0.789324757643027 1 0.0943239629268646 experiment 0.421350484713945 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109301175 chr1:109301159 nonsynonymous SNV 0.991 0 hm6A_associated_SNPs_80301 0 0 1 1 109301151 109301174 mRNA hsa-miR-136 STXBP3 miRanda miRanda
14034 chr1 76255000 76255000 1 + G A UCEC 76255002 + 76254982 76255022 41 GGAATAAGTGCTAGTATCGGACATGATCCTCATCTTTTATA GGAATAAGTGCTAGTATCAGACATGATCCTCATCTTTTATA < 41bp 1 0.795060072356311 1 0.617665827274323 experiment 0.409879855287379 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 19 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76255002 chr1:76255000 nonsynonymous SNV 0.993 2 hm6A_associated_SNPs_80302 0 0 1 2 76254987 76255010 mRNA hsa-miR-190 RABGGTB miRanda miRanda
14034 chr1 76255000 76255000 1 + G A UCEC 76255002 + 76254982 76255022 41 GGAATAAGTGCTAGTATCGGACATGATCCTCATCTTTTATA GGAATAAGTGCTAGTATCAGACATGATCCTCATCTTTTATA < 41bp 1 0.795060072356311 1 0.617665827274323 experiment 0.409879855287379 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31548708;GSE125780;DART-seq;HEK293T;Control 19 RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76255002 chr1:76255000 nonsynonymous SNV 0.993 2 hm6A_associated_SNPs_80302 0 0 1 2 76254989 76255010 mRNA hsa-miR-190b RABGGTB miRanda miRanda
14034 chr1 172558777 172558777 1 + G T UCEC 172558795 + 172558775 172558815 41 TAGCTGACACAGCAAAGCAAACTTTGATTTCTGTTGTGGAT TATCTGACACAGCAAAGCAAACTTTGATTTCTGTTGTGGAT < 41bp 1 0.624079846487178 1 0.986002683639526 experiment 0.751840307025645 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 3 SUCO ENSG00000094975 CDS Human protein_coding chr1:172558795 chr1:172558777 nonsynonymous SNV 0.947 0 hm6A_associated_SNPs_80331 0 0 1 1 172558758 172558780 mRNA hsa-miR-590-5p C1orf9 miRanda miRanda
14034 chr6 142491501 142491501 1 + C A UCEC 142491485 + 142491465 142491505 41 CTCTCTTTTCTCTTCCAGAAACATGATCAAGTCCTTCTATA CTCTCTTTTCTCTTCCAGAAACATGATCAAGTCCTTATATA < 41bp 1 0.635066947473872 1 0.0868842899799347 experiment 0.729866105052255 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142491485 chr6:142491501 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_80345 0 0 1 2 142491491 142491510 mRNA hsa-miR-144 VTA1 miRanda miRanda
14034 chr6 142491501 142491501 1 + C A UCEC 142491485 + 142491465 142491505 41 CTCTCTTTTCTCTTCCAGAAACATGATCAAGTCCTTCTATA CTCTCTTTTCTCTTCCAGAAACATGATCAAGTCCTTATATA < 41bp 1 0.635066947473872 1 0.0868842899799347 experiment 0.729866105052255 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 37 VTA1 ENSG00000009844 CDS Human protein_coding chr6:142491485 chr6:142491501 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_80345 0 0 1 2 142491488 142491511 mRNA hsa-miR-448 VTA1 miRanda miRanda
14034 chr17 25630481 25630481 1 + C T UCEC 25630486 + 25630466 25630506 41 CAGAAAAATAAGCCTCGTGAACATATTATAGACTGTGGAGA CAGAAAAATAAGCCTTGTGAACATATTATAGACTGTGGAGA < 41bp 1 0.649313652281687 1 0.85801500082016 experiment 0.701372695436626 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25630486 chr17:25630481 nonsynonymous SNV 0.989 0 hm6A_associated_SNPs_80392 0 0 1 2 25630475 25630496 mRNA hsa-miR-374a WSB1 miRanda miRanda
14034 chr17 25630481 25630481 1 + C T UCEC 25630486 + 25630466 25630506 41 CAGAAAAATAAGCCTCGTGAACATATTATAGACTGTGGAGA CAGAAAAATAAGCCTTGTGAACATATTATAGACTGTGGAGA < 41bp 1 0.649313652281687 1 0.85801500082016 experiment 0.701372695436626 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25630486 chr17:25630481 nonsynonymous SNV 0.989 0 hm6A_associated_SNPs_80392 0 0 1 2 25630475 25630496 mRNA hsa-miR-374b WSB1 miRanda miRanda
14034 chr17 25630481 25630481 1 + C T UCEC 25630497 + 25630477 25630517 41 GCCTCGTGAACATATTATAGACTGTGGAGATATAGTCTGGA GCCTTGTGAACATATTATAGACTGTGGAGATATAGTCTGGA < 41bp 1 0.410535573306454 1 0.945177972316742 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25630497 chr17:25630481 nonsynonymous SNV 0.989 0 hm6A_associated_SNPs_80393 0 0 1 2 25630475 25630496 mRNA hsa-miR-374a WSB1 miRanda miRanda
14034 chr17 25630481 25630481 1 + C T UCEC 25630497 + 25630477 25630517 41 GCCTCGTGAACATATTATAGACTGTGGAGATATAGTCTGGA GCCTTGTGAACATATTATAGACTGTGGAGATATAGTCTGGA < 41bp 1 0.410535573306454 1 0.945177972316742 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 5 WSB1 ENSG00000109046 CDS Human protein_coding chr17:25630497 chr17:25630481 nonsynonymous SNV 0.989 0 hm6A_associated_SNPs_80393 0 0 1 2 25630475 25630496 mRNA hsa-miR-374b WSB1 miRanda miRanda
14034 chr2 160604595 160604595 1 + G A UCEC 160604596 + 160604576 160604616 41 AGGGTTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGA AGGGTTGTTTCATCTCAAAAACCATTTCAAGAATCTTCTGA < 41bp 1 0.466713981721519 1 0.913644313812256 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 20 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604596 chr2:160604595 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_80409 0 0 1 1 160604583 160604605 mRNA hsa-miR-203 MARCH7 miRanda miRanda
14034 chr15 45713348 45713348 1 + C A UCEC 45713365 + 45713345 45713385 41 GGACTTGGCTTTATATGAAAACTTATTTAAGAAAGAAGGAT GGAATTGGCTTTATATGAAAACTTATTTAAGAAAGAAGGAT < 41bp 1 0.716283445859421 1 0.709042906761169 experiment 0.567433108281158 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 4 SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45713365 chr15:45713348 nonsynonymous SNV 0.987 1 hm6A_associated_SNPs_80422 0 0 1 1 45713339 45713360 mRNA hsa-miR-340 SPATA5L1 miRanda miRanda
14034 chr3 129200430 129200430 1 + G T UCEC 129200446 + 129200426 129200466 41 CACAGCTGTGCGCTGCTTGGACATGAGTGCCTCCCGTAAGA CACATCTGTGCGCTGCTTGGACATGAGTGCCTCCCGTAAGA < 41bp 1 0.753491138797002 1 0.99602222442627 experiment 0.493017722405996 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 5 IFT122 ENSG00000163913 CDS Human protein_coding chr3:129200446 chr3:129200430 nonsynonymous SNV 0.971 1 hm6A_associated_SNPs_80423 0 0 0 1 129200423 129200443 mRNA hsa-miR-503 IFT122 miRanda miRanda
14034 chr1 12569008 12569008 1 + G T UCEC 12569021 + 12569001 12569041 41 GCAAAGAGCCTCTACTATGAACAGCAGCTTATGTTAAGACT GCAAAGATCCTCTACTATGAACAGCAGCTTATGTTAAGACT < 41bp 1 0.7816546564333 1 0.985739052295685 experiment 0.436690687133399 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 VPS13D ENSG00000048707 CDS Human protein_coding chr1:12569021 chr1:12569008 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_80458 0 0 1 3 12569007 12569031 mRNA hsa-miR-302d VPS13D miRanda miRanda
14034 chr1 12569008 12569008 1 + G T UCEC 12569021 + 12569001 12569041 41 GCAAAGAGCCTCTACTATGAACAGCAGCTTATGTTAAGACT GCAAAGATCCTCTACTATGAACAGCAGCTTATGTTAAGACT < 41bp 1 0.7816546564333 1 0.985739052295685 experiment 0.436690687133399 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 VPS13D ENSG00000048707 CDS Human protein_coding chr1:12569021 chr1:12569008 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_80458 0 0 1 3 12569008 12569031 mRNA hsa-miR-520b VPS13D miRanda miRanda
14034 chr1 12569008 12569008 1 + G T UCEC 12569021 + 12569001 12569041 41 GCAAAGAGCCTCTACTATGAACAGCAGCTTATGTTAAGACT GCAAAGATCCTCTACTATGAACAGCAGCTTATGTTAAGACT < 41bp 1 0.7816546564333 1 0.985739052295685 experiment 0.436690687133399 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 VPS13D ENSG00000048707 CDS Human protein_coding chr1:12569021 chr1:12569008 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_80458 0 0 1 3 12569007 12569031 mRNA hsa-miR-520c-3p VPS13D miRanda miRanda
14034 chr11 836315 836315 1 + G C UCEC 836306 + 836286 836326 41 GACGCTGGCCCTCAAGAGTGACTACATCAGCCTGCTGGCCT GACGCTGGCCCTCAAGAGTGACTACATCACCCTGCTGGCCT < 41bp 1 0.404016125314891 1 0.92364776134491 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 30 CD151 ENSG00000177697 CDS Human protein_coding chr11:836306 chr11:836315 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_80464 0 0 1 1 836302 836323 mRNA hsa-miR-214 CD151 miRanda miRanda
14034 chr5 140049096 140049096 1 + C T UCEC 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG TGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.763544060299868 1 0.986321806907654 experiment 0.472911879400265 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049096 nonsynonymous SNV 0.956 1 hm6A_associated_SNPs_80475 0 0 1 4 140049089 140049107 mRNA hsa-miR-129-5p WDR55 miRanda miRanda
14034 chr5 140049096 140049096 1 + C T UCEC 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG TGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.763544060299868 1 0.986321806907654 experiment 0.472911879400265 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049096 nonsynonymous SNV 0.956 1 hm6A_associated_SNPs_80475 0 0 1 4 140049093 140049114 mRNA hsa-miR-204 WDR55 miRanda miRanda
14034 chr5 140049096 140049096 1 + C T UCEC 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG TGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.763544060299868 1 0.986321806907654 experiment 0.472911879400265 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049096 nonsynonymous SNV 0.956 1 hm6A_associated_SNPs_80475 0 0 1 4 140049093 140049114 mRNA hsa-miR-211 WDR55 miRanda miRanda
14034 chr5 140049096 140049096 1 + C T UCEC 140049116 + 140049096 140049136 41 CGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG TGGCGCAAAAAAAAGGGAGGACCACTGCGGGCTCTGAGCAG < 41bp 1 0.763544060299868 1 0.986321806907654 experiment 0.472911879400265 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 1 WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049116 chr5:140049096 nonsynonymous SNV 0.956 1 hm6A_associated_SNPs_80475 0 0 1 4 140049089 140049105 mRNA hsa-miR-450a WDR55 miRanda miRanda
14034 chrX 107374564 107374564 1 + C A UCEC 107374575 + 107374555 107374595 41 GCTCAAGCCCTTATCTGTAGACACTTGGGAAGGGGTGAGTT GCTCAAGCCATTATCTGTAGACACTTGGGAAGGGGTGAGTT < 41bp 1 0.506747661085769 1 0.104468941688538 experiment 0.986504677828462 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 10 ATG4A ENSG00000101844 CDS Human protein_coding chrX:107374575 chrX:107374564 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_80489 0 0 1 1 107374553 107374581 mRNA hsa-miR-372 ATG4A miRanda miRanda
14034 chr11 65270179 65270179 1 + G T UCEC 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAGAAAACATCTCCTTGGTGAATTGAT < 41bp 1 0.245587157230886 1 0.824376702308655 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270179 . 0.985 0 hm6A_associated_SNPs_80500 0 0 1 3 65270164 65270185 lncRNA hsa-miR-28-5p MALAT1 miRanda starBase2
14034 chr11 65270179 65270179 1 + G T UCEC 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAGAAAACATCTCCTTGGTGAATTGAT < 41bp 1 0.245587157230886 1 0.824376702308655 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270179 . 0.985 0 hm6A_associated_SNPs_80500 0 0 1 3 65270163 65270185 lncRNA hsa-miR-3139 MALAT1 miRanda starBase2
14034 chr11 65270179 65270179 1 + G T UCEC 65270176 + 65270156 65270196 41 ATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT ATGGCCTAGATGCAGAGAAAACATCTCCTTGGTGAATTGAT < 41bp 1 0.245587157230886 1 0.824376702308655 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 24 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270176 chr11:65270179 . 0.985 0 hm6A_associated_SNPs_80500 0 0 1 3 65270163 65270185 lncRNA hsa-miR-708-5p MALAT1 miRanda starBase2
14034 chr6 33243614 33243614 1 + C T UCEC 33243617 + 33243597 33243637 41 TGTGGTGTTGAGGAAAGCAGACATTGACCTCACCAAGAGGG TGTGGTGTTGAGGAAAGTAGACATTGACCTCACCAAGAGGG < 41bp 1 0.749580638613762 1 0.011732280254364 experiment 0.500838722772475 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 18 RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243617 chr6:33243614 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_80520 0 0 1 1 33243597 33243619 mRNA hsa-miR-346 RPS18 miRanda miRanda
14034 chr6 33243614 33243614 1 + C T UCEC 33243623 + 33243603 33243643 41 GTTGAGGAAAGCAGACATTGACCTCACCAAGAGGGCGGGAG GTTGAGGAAAGTAGACATTGACCTCACCAAGAGGGCGGGAG < 41bp 1 0.227173706027285 1 0.0112518668174744 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243623 chr6:33243614 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_80521 0 0 1 1 33243597 33243619 mRNA hsa-miR-346 RPS18 miRanda miRanda
14034 chr21 33039599 33039599 1 + G A UCEC 33039596 + 33039576 33039616 41 TTGGAGACTTGGGCAATGTGACTGCTGACAAAGATGGTGTG TTGGAGACTTGGGCAATGTGACTACTGACAAAGATGGTGTG < 41bp 1 0.399118964554124 1 0.942303955554962 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 24 SOD1 ENSG00000142168 CDS Human protein_coding chr21:33039596 chr21:33039599 nonsynonymous SNV 0.992 4 hm6A_associated_SNPs_80537 0 0 1 1 33039581 33039602 mRNA hsa-miR-497 SOD1 miRanda miRanda
14034 chr1 162762509 162762509 1 + T C UCEC 162762523 + 162762503 162762543 41 TCTGTGTTTGGCGTGCAGGAACATGAGCAAGGCAGAAGCTG TCTGTGCTTGGCGTGCAGGAACATGAGCAAGGCAGAAGCTG < 41bp 1 0.610692748843521 1 0.211908459663391 experiment 0.778614502312958 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162762523 chr1:162762509 synonymous SNV . 0 hm6A_associated_SNPs_80540 0 0 1 1 162762486 162762509 mRNA hsa-miR-128 HSD17B7 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAAGGCACTGTACTTTG < 41bp 1 0.367294924478293 1 0.982802391052246 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_80562 0 0 1 4 31141374 31141396 mRNA hsa-miR-199a-5p MYST1 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAAGGCACTGTACTTTG < 41bp 1 0.367294924478293 1 0.982802391052246 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_80562 0 0 1 4 31141373 31141394 mRNA hsa-miR-187 MYST1 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAAGGCACTGTACTTTG < 41bp 1 0.367294924478293 1 0.982802391052246 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_80562 0 0 1 4 31141374 31141396 mRNA hsa-miR-199b-5p MYST1 miRanda miRanda
14034 chr16 31141389 31141389 1 + A G UCEC 31141381 + 31141361 31141401 41 GCTGGCCAAGCTTTTCCTGGACCATAAGACACTGTACTTTG GCTGGCCAAGCTTTTCCTGGACCATAAGGCACTGTACTTTG < 41bp 1 0.367294924478293 1 0.982802391052246 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 29 KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141381 chr16:31141389 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_80562 0 0 1 4 31141377 31141397 mRNA hsa-miR-128 MYST1 miRanda miRanda
14034 chr6 42985887 42985887 1 + A G UCEC 42985902 + 42985882 42985922 41 GGCGGACTGTTTTTCCAATGACATTCACAAGCTAGATACCA GGCGGGCTGTTTTTCCAATGACATTCACAAGCTAGATACCA < 41bp 1 0.732309539293753 1 0.0176252126693726 experiment 0.535380921412494 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 6 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985902 chr6:42985887 nonsynonymous SNV 0.975 3 hm6A_associated_SNPs_80573 0 0 1 2 42985883 42985893 mRNA hsa-miR-212 KLHDC3 miRanda miRanda
14034 chr6 42985887 42985887 1 + A G UCEC 42985902 + 42985882 42985922 41 GGCGGACTGTTTTTCCAATGACATTCACAAGCTAGATACCA GGCGGGCTGTTTTTCCAATGACATTCACAAGCTAGATACCA < 41bp 1 0.732309539293753 1 0.0176252126693726 experiment 0.535380921412494 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 6 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985902 chr6:42985887 nonsynonymous SNV 0.975 3 hm6A_associated_SNPs_80573 0 0 1 2 42985883 42985893 mRNA hsa-miR-132 KLHDC3 miRanda miRanda
14034 chr19 49464139 49464139 1 + C T UCEC 49464122 + 49464102 49464142 41 CATCATGGGCTGGACATTGGACTTCCTCCGGGAGCGGCTGT CATCATGGGCTGGACATTGGACTTCCTCCGGGAGCGGTTGT < 41bp 1 0.441742290678379 1 0.876723349094391 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 BAX ENSG00000087088 CDS Human protein_coding chr19:49464122 chr19:49464139 synonymous SNV . 0 hm6A_associated_SNPs_80586 0 0 1 2 49464136 49464157 mRNA hsa-miR-133a BAX miRanda miRanda
14034 chr19 49464139 49464139 1 + C T UCEC 49464122 + 49464102 49464142 41 CATCATGGGCTGGACATTGGACTTCCTCCGGGAGCGGCTGT CATCATGGGCTGGACATTGGACTTCCTCCGGGAGCGGTTGT < 41bp 1 0.441742290678379 1 0.876723349094391 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control|31548708;GSE125780;DART-seq;HEK293T;Control|31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 38 BAX ENSG00000087088 CDS Human protein_coding chr19:49464122 chr19:49464139 synonymous SNV . 0 hm6A_associated_SNPs_80586 0 0 1 2 49464136 49464157 mRNA hsa-miR-133b BAX miRanda miRanda
14034 chr1 150307442 150307442 1 + A G UCEC 150307423 + 150307403 150307443 41 CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCAC CAGGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCGC < 41bp 1 0.428927694715909 1 0.711574077606201 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307423 chr1:150307442 synonymous SNV . 0 hm6A_associated_SNPs_80593 0 0 1 1 150307424 150307445 mRNA hsa-miR-140-5p PRPF3 miRanda miRanda
14034 chr12 95879657 95879657 1 + A G UCEC 95879666 + 95879646 95879686 41 ATCTCACAGCAAAAGTTCAAACAGACCCTCCCTCAGTTCCA ATCTCACAGCAGAAGTTCAAACAGACCCTCCCTCAGTTCCA < 41bp 1 0.502825240023418 1 0.845149993896484 experiment 0.994349519953164 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 METAP2 ENSG00000111142 CDS Human protein_coding chr12:95879666 chr12:95879657 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_80599 0 0 1 2 95879655 95879658 mRNA hsa-miR-133a METAP2 miRanda miRanda
14034 chr12 95879657 95879657 1 + A G UCEC 95879666 + 95879646 95879686 41 ATCTCACAGCAAAAGTTCAAACAGACCCTCCCTCAGTTCCA ATCTCACAGCAGAAGTTCAAACAGACCCTCCCTCAGTTCCA < 41bp 1 0.502825240023418 1 0.845149993896484 experiment 0.994349519953164 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 12 METAP2 ENSG00000111142 CDS Human protein_coding chr12:95879666 chr12:95879657 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_80599 0 0 1 2 95879655 95879658 mRNA hsa-miR-133b METAP2 miRanda miRanda
14034 chr17 1943562 1943562 1 + G A UCEC 1943545 + 1943525 1943565 41 AGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCAT AGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCACAT < 41bp 1 0.768481500178865 1 0.568644225597382 experiment 0.463036999642269 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 38 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943545 chr17:1943562 nonsynonymous SNV 0.848 1 hm6A_associated_SNPs_80628 0 0 1 1 1943539 1943562 mRNA hsa-miR-138 DPH1 miRanda miRanda
14034 chrX 48759681 48759681 1 + G A UCEC 48759666 + 48759646 48759686 41 GCGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACA GCGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCAAGACA < 41bp 1 0.497895585320378 1 0.966760218143463 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 36 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759666 chrX:48759681 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_80636 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chrX 48759681 48759681 1 + G A UCEC 48759684 + 48759664 48759704 41 AGACAGAGAGAGAGAGCGAGACAGGGAACGGGATCGGGACC AGACAGAGAGAGAGAGCAAGACAGGGAACGGGATCGGGACC < 41bp 1 0.4016604837136 1 0.986967980861664 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759684 chrX:48759681 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_80637 0 0 1 1 48759669 48759690 mRNA hsa-miR-339-5p PQBP1 miRanda miRanda
14034 chr13 111885609 111885609 1 + C T UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATATGACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.407520446766651 1 0.830166220664978 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885609 nonsynonymous SNV 0.912 4 hm6A_associated_SNPs_80650 0 0 1 5 111885595 111885617 mRNA hsa-miR-34a ARHGEF7 miRanda miRanda
14034 chr13 111885609 111885609 1 + C T UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATATGACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.407520446766651 1 0.830166220664978 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885609 nonsynonymous SNV 0.912 4 hm6A_associated_SNPs_80650 0 0 1 5 111885596 111885619 mRNA hsa-miR-183 ARHGEF7 miRanda miRanda
14034 chr13 111885609 111885609 1 + C T UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATATGACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.407520446766651 1 0.830166220664978 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885609 nonsynonymous SNV 0.912 4 hm6A_associated_SNPs_80650 0 0 1 5 111885595 111885617 mRNA hsa-miR-34c-5p ARHGEF7 miRanda miRanda
14034 chr13 111885609 111885609 1 + C T UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATATGACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.407520446766651 1 0.830166220664978 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885609 nonsynonymous SNV 0.912 4 hm6A_associated_SNPs_80650 0 0 1 5 111885595 111885617 mRNA hsa-miR-449a ARHGEF7 miRanda miRanda
14034 chr13 111885609 111885609 1 + C T UCEC 111885621 + 111885601 111885641 41 ATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG ATTTGATATGACTGCCATAAACAAAAGCTATTACAATGTGG < 41bp 1 0.407520446766651 1 0.830166220664978 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 9 ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111885621 chr13:111885609 nonsynonymous SNV 0.912 4 hm6A_associated_SNPs_80650 0 0 1 5 111885595 111885617 mRNA hsa-miR-449b ARHGEF7 miRanda miRanda
14034 chrX 73046589 73046589 1 - C A UCEC 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGATAGATGACCCAAGCGAAAAAGGTATCT < 41bp 1 0.180709360307866 1 0.851451516151428 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046589 . . 0 hm6A_associated_SNPs_80671 0 0 1 2 73046585 73046606 lncRNA hsa-miR-3909 XIST miRanda starBase2
14034 chrX 73046589 73046589 1 - C A UCEC 73046587 - 73046567 73046607 41 CCTACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCT CCTACCTAGATGGATAGATGACCCAAGCGAAAAAGGTATCT < 41bp 1 0.180709360307866 1 0.851451516151428 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 19 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046587 chrX:73046589 . . 0 hm6A_associated_SNPs_80671 0 0 1 2 73046585 73046601 lncRNA hsa-miR-6852-3p XIST miRanda starBase2
14034 chr10 70502177 70502177 1 + G A UCEC 70502193 + 70502173 70502213 41 CTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCA CTCAACCAACAGCACAAATAACTGTATCATATCCAACACCA < 41bp 1 0.383326505206275 1 0.451979100704193 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70502193 chr10:70502177 synonymous SNV . 0 hm6A_associated_SNPs_80690 0 0 1 1 70502169 70502189 mRNA hsa-miR-218 CCAR1 miRanda miRanda
14034 chr19 21300605 21300605 1 + C A UCEC 21300616 + 21300596 21300636 41 GCCTTTAACCACTCCTCAAAACTTACTATACATAAGATAAT GCCTTTAACAACTCCTCAAAACTTACTATACATAAGATAAT < 41bp 1 0.79313274934379 1 0.998632192611694 experiment 0.41373450131242 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 10 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300616 chr19:21300605 nonsynonymous SNV 0.021 0 hm6A_associated_SNPs_80692 0 0 1 1 21300588 21300609 mRNA hsa-miR-140-5p ZNF714 miRanda miRanda
14034 chr20 57485114 57485114 1 + T C UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCCC < 41bp 1 0.355564080044613 1 0.998230814933777 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485114 synonymous SNV . 0 hm6A_associated_SNPs_80699 0 0 1 4 57485097 57485119 mRNA hsa-miR-15a GNAS miRanda miRanda
14034 chr20 57485114 57485114 1 + T C UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCCC < 41bp 1 0.355564080044613 1 0.998230814933777 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485114 synonymous SNV . 0 hm6A_associated_SNPs_80699 0 0 1 4 57485097 57485119 mRNA hsa-miR-15b GNAS miRanda miRanda
14034 chr20 57485114 57485114 1 + T C UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCCC < 41bp 1 0.355564080044613 1 0.998230814933777 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485114 synonymous SNV . 0 hm6A_associated_SNPs_80699 0 0 1 4 57485104 57485126 mRNA hsa-miR-142-3p GNAS miRanda miRanda
14034 chr20 57485114 57485114 1 + T C UCEC 57485095 + 57485075 57485115 41 TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCTC TGGGAAATCGAAGATTGAGGACTACTTTCCAGAATTTGCCC < 41bp 1 0.355564080044613 1 0.998230814933777 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|26593424;GSE73405;miCLIP;HepG2;Heat_shock|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 40 GNAS ENSG00000087460 CDS Human protein_coding chr20:57485095 chr20:57485114 synonymous SNV . 0 hm6A_associated_SNPs_80699 0 0 1 4 57485098 57485119 mRNA hsa-miR-497 GNAS miRanda miRanda
14034 chr10 75673864 75673864 1 + G A UCEC 75673860 + 75673840 75673880 41 ACACAAGGACTACAGCGCTGACACGCTTGCTCACCACAACG ACACAAGGACTACAGCGCTGACACACTTGCTCACCACAACG < 41bp 1 0.466624636096936 1 0.947790563106537 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 25 PLAU ENSG00000122861 CDS Human protein_coding chr10:75673860 chr10:75673864 synonymous SNV . 0 hm6A_associated_SNPs_80701 0 0 0 1 75673849 75673871 mRNA hsa-miR-503 PLAU miRanda miRanda
14034 chr14 23240754 23240754 1 + A G UCEC 23240767 + 23240747 23240787 41 TGGCACGACACACTTGGCTGACTTATGTTCTGTGCGCATTC TGGCACGGCACACTTGGCTGACTTATGTTCTGTGCGCATTC < 41bp 1 0.623312459763255 1 0.798051834106445 experiment 0.753375080473491 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 8 OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240767 chr14:23240754 nonsynonymous SNV 0.320 4 hm6A_associated_SNPs_80734 0 0 1 1 23240739 23240762 mRNA hsa-miR-382 OXA1L miRanda miRanda
14034 chr20 47905585 47905585 1 + C T UCEC 47905584 + 47905564 47905604 41 ATCCACCTTCTTTCTTAGAAACTGGCGATGGAATATGAGAG ATCCACCTTCTTTCTTAGAAATTGGCGATGGAATATGAGAG Direct Loss 1 0.364580210587067 1 0.90200674533844 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 22 ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47905584 chr20:47905585 . . 0 hm6A_associated_SNPs_80767 0 0 1 1 47905582 47905606 mRNA hsa-miR-205 C20orf199 miRanda miRanda
14034 chr8 11696074 11696074 1 + C G UCEC 11696068 + 11696048 11696088 41 CCCTGAGCTGGCAGTACCTGACCACTCTCTCCCAGGTAACA CCCTGAGCTGGCAGTACCTGACCACTGTCTCCCAGGTAACA < 41bp 1 0.545485324511528 1 0.75510048866272 experiment 0.909029350976944 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control|24981863;GSE54365;m6A-seq with improved protocol;A549;Control 27 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11696068 chr8:11696074 nonsynonymous SNV 0.944 0 hm6A_associated_SNPs_80779 0 0 1 1 11696058 11696080 mRNA hsa-miR-185 FDFT1 miRanda miRanda
14034 chr8 11696074 11696074 1 + C G UCEC 11696086 + 11696066 11696106 41 TGACCACTCTCTCCCAGGTAACAGAAGACTATGTTCAGACT TGACCACTGTCTCCCAGGTAACAGAAGACTATGTTCAGACT < 41bp 1 0.743715840000684 1 0.886492729187012 experiment 0.512568319998633 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 9 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11696086 chr8:11696074 nonsynonymous SNV 0.944 0 hm6A_associated_SNPs_80780 0 0 1 1 11696058 11696080 mRNA hsa-miR-185 FDFT1 miRanda miRanda
14034 chr8 11696074 11696074 1 + C G UCEC 11696093 + 11696073 11696113 41 TCTCTCCCAGGTAACAGAAGACTATGTTCAGACTGGAGAAC TGTCTCCCAGGTAACAGAAGACTATGTTCAGACTGGAGAAC < 41bp 1 0.764657886977729 1 0.916847944259644 experiment 0.470684226044541 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control 2 FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11696093 chr8:11696074 nonsynonymous SNV 0.944 0 hm6A_associated_SNPs_80781 0 0 1 1 11696058 11696080 mRNA hsa-miR-185 FDFT1 miRanda miRanda
14034 chr17 58734033 58734033 1 + G A UCEC 58734042 + 58734022 58734062 41 GCGTATGCTCCGAGCAGATAACACTAGTGCCATAGTAATCT GCGTATGCTCCAAGCAGATAACACTAGTGCCATAGTAATCT < 41bp 1 0.58406017649953 1 0.864313125610352 experiment 0.831879647000941 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 12 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58734042 chr17:58734033 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_80786 0 0 0 1 58734018 58734042 mRNA hsa-miR-137 PPM1D miRanda miRanda
14034 chrX 77369346 77369346 1 + C T UCEC 77369345 + 77369325 77369365 41 TGATGGTGTGCCCATGCCTGACAAGTACTCCTTAGAGCCAG TGATGGTGTGCCCATGCCTGATAAGTACTCCTTAGAGCCAG Direct Loss 1 0.690354698343081 1 0.800966382026672 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77369345 chrX:77369346 synonymous SNV . 0 hm6A_associated_SNPs_80801 0 0 1 2 77369345 77369366 mRNA hsa-miR-149 PGK1 miRanda miRanda
14034 chrX 77369346 77369346 1 + C T UCEC 77369345 + 77369325 77369365 41 TGATGGTGTGCCCATGCCTGACAAGTACTCCTTAGAGCCAG TGATGGTGTGCCCATGCCTGATAAGTACTCCTTAGAGCCAG Direct Loss 1 0.690354698343081 1 0.800966382026672 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 22 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77369345 chrX:77369346 synonymous SNV . 0 hm6A_associated_SNPs_80801 0 0 1 2 77369345 77369367 mRNA hsa-miR-193a-3p PGK1 miRanda miRanda
14034 chr18 32888470 32888470 1 + G A UCEC 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATATCAGT < 41bp 1 0.124892463241821 1 0.286192357540131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888470 . . 0 hm6A_associated_SNPs_80828 0 0 1 5 32888450 32888472 mRNA hsa-miR-181a ZNF271 miRanda miRanda
14034 chr18 32888470 32888470 1 + G A UCEC 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATATCAGT < 41bp 1 0.124892463241821 1 0.286192357540131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888470 . . 0 hm6A_associated_SNPs_80828 0 0 1 5 32888450 32888472 mRNA hsa-miR-181b ZNF271 miRanda miRanda
14034 chr18 32888470 32888470 1 + G A UCEC 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATATCAGT < 41bp 1 0.124892463241821 1 0.286192357540131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888470 . . 0 hm6A_associated_SNPs_80828 0 0 1 5 32888451 32888472 mRNA hsa-miR-181c ZNF271 miRanda miRanda
14034 chr18 32888470 32888470 1 + G A UCEC 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATATCAGT < 41bp 1 0.124892463241821 1 0.286192357540131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888470 . . 0 hm6A_associated_SNPs_80828 0 0 1 5 32888450 32888476 mRNA hsa-miR-217 ZNF271 miRanda miRanda
14034 chr18 32888470 32888470 1 + G A UCEC 32888455 + 32888435 32888475 41 GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATGTCAGT GAAAACCTTCAAAGTGAAAAACATTTTTACTGAATATCAGT < 41bp 1 0.124892463241821 1 0.286192357540131 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 36 ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32888455 chr18:32888470 . . 0 hm6A_associated_SNPs_80828 0 0 1 5 32888450 32888472 mRNA hsa-miR-181d ZNF271 miRanda miRanda
14034 chr15 58006777 58006777 1 + T C UCEC 58006775 + 58006755 58006795 41 GCGCAAAAATTAGCTGAAAGACTGAATATTAAAATGCGGAG GCGCAAAAATTAGCTGAAAGACCGAATATTAAAATGCGGAG < 41bp 1 0.659595050325771 1 0.678846836090088 experiment 0.680809899348459 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 23 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58006775 chr15:58006777 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_80855 0 0 1 3 58006768 58006784 mRNA hsa-miR-181b GCOM1 miRanda miRanda
14034 chr15 58006777 58006777 1 + T C UCEC 58006775 + 58006755 58006795 41 GCGCAAAAATTAGCTGAAAGACTGAATATTAAAATGCGGAG GCGCAAAAATTAGCTGAAAGACCGAATATTAAAATGCGGAG < 41bp 1 0.659595050325771 1 0.678846836090088 experiment 0.680809899348459 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 23 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58006775 chr15:58006777 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_80855 0 0 1 3 58006768 58006784 mRNA hsa-miR-181c GCOM1 miRanda miRanda
14034 chr15 58006777 58006777 1 + T C UCEC 58006775 + 58006755 58006795 41 GCGCAAAAATTAGCTGAAAGACTGAATATTAAAATGCGGAG GCGCAAAAATTAGCTGAAAGACCGAATATTAAAATGCGGAG < 41bp 1 0.659595050325771 1 0.678846836090088 experiment 0.680809899348459 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control 23 GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58006775 chr15:58006777 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_80855 0 0 1 3 58006768 58006784 mRNA hsa-miR-181d GCOM1 miRanda miRanda
14034 chr22 24313759 24313759 1 + G A UCEC 24313756 + 24313736 24313776 41 CCAATCATAAAAAAGTCATGACCGTCCCTATCTTGCCAATC CCAATCATAAAAAAGTCATGACCATCCCTATCTTGCCAATC < 41bp 1 0.656321348315254 1 0.897393941879272 experiment 0.687357303369492 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 DDT ENSG00000099977 CDS Human protein_coding chr22:24313756 chr22:24313759 nonsynonymous SNV 0.837 3 hm6A_associated_SNPs_80869 0 0 1 2 24313753 24313773 mRNA hsa-miR-31 DDTL miRanda miRanda
14034 chr22 24313759 24313759 1 + G A UCEC 24313756 + 24313736 24313776 41 CCAATCATAAAAAAGTCATGACCGTCCCTATCTTGCCAATC CCAATCATAAAAAAGTCATGACCATCCCTATCTTGCCAATC < 41bp 1 0.656321348315254 1 0.897393941879272 experiment 0.687357303369492 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 24 DDT ENSG00000099977 CDS Human protein_coding chr22:24313756 chr22:24313759 nonsynonymous SNV 0.837 3 hm6A_associated_SNPs_80869 0 0 1 2 24313753 24313775 mRNA hsa-miR-182 DDTL miRanda miRanda
14034 chr22 46725400 46725400 1 + A G UCEC 46725408 + 46725388 46725428 41 GGCCTCTGATCGACCTCATGACAAACACTCCAGACATGAAT GGCCTCTGATCGGCCTCATGACAAACACTCCAGACATGAAT < 41bp 1 0.730843283552069 1 0.985135793685913 experiment 0.538313432895862 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 13 GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46725408 chr22:46725400 nonsynonymous SNV 0.816 4 hm6A_associated_SNPs_80879 0 0 1 1 46725397 46725419 mRNA hsa-miR-122 GTSE1 miRanda miRanda
14034 chr17 57270882 57270882 1 + C A UCEC 57270892 + 57270872 57270912 41 CCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAA CCTGTCCAAGATGTGGTCAAACATGTCACATGAGTGGTAAA < 41bp 1 0.35745622539119 1 0.170725107192993 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270892 chr17:57270882 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_80882 0 0 1 2 57270879 57270901 mRNA hsa-miR-134 PRR11 miRanda miRanda
14034 chr17 57270882 57270882 1 + C A UCEC 57270892 + 57270872 57270912 41 CCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAA CCTGTCCAAGATGTGGTCAAACATGTCACATGAGTGGTAAA < 41bp 1 0.35745622539119 1 0.170725107192993 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 11 PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270892 chr17:57270882 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_80882 0 0 1 2 57270879 57270901 mRNA hsa-miR-542-3p PRR11 miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-302a MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-302b MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-302c MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-302d MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-372 MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-373 MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-520e MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-520a-3p MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-520b MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-520c-3p MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326563 mRNA hsa-miR-520d-3p MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326545 1326556 mRNA hsa-miR-544 MAEA miRanda miRanda
14034 chr4 1326548 1326548 1 + T C UCEC 1326545 + 1326525 1326565 41 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAG GCCAAAATGTTGTTTTTTAGACACGCAAGAAAGCACTTCAG < 41bp 1 0.648576936676108 1 0.816919684410095 experiment 0.702846126647785 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 24 MAEA ENSG00000090316 CDS Human protein_coding chr4:1326545 chr4:1326548 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_80887 0 0 1 13 1326547 1326563 mRNA hsa-miR-302e MAEA miRanda miRanda
14034 chr1 236704972 236704972 1 + G T UCEC 236704990 + 236704970 236705010 41 AAGCATCTAGTCTGGAACTGACAGAGATAAGTAGAGAAAAT AATCATCTAGTCTGGAACTGACAGAGATAAGTAGAGAAAAT < 41bp 1 0.366960986628274 1 0.680387258529663 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 3 LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236704990 chr1:236704972 nonsynonymous SNV 0.002 0 hm6A_associated_SNPs_80956 0 0 1 1 236704971 236704992 mRNA hsa-miR-223 LGALS8 miRanda miRanda
14034 chr19 50185204 50185204 1 + G A UCEC 50185222 + 50185202 50185242 41 CCGCAACTCCATGTTTCATAACCGGCACCTCTTCAAGGACA CCACAACTCCATGTTTCATAACCGGCACCTCTTCAAGGACA < 41bp 1 0.298334206166251 1 0.129198968410492 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 3 PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50185222 chr19:50185204 nonsynonymous SNV 0.790 2 hm6A_associated_SNPs_80960 0 0 1 1 50185198 50185219 mRNA hsa-miR-494 PRMT1 miRanda miRanda
14034 chr2 210884499 210884499 1 + G A UCEC 210884517 + 210884497 210884537 41 ACGTTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGTTC ACATTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGTTC < 41bp 1 0.352445650977997 1 0.673643946647644 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 RPE ENSG00000197713 CDS Human protein_coding chr2:210884517 chr2:210884499 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_80990 0 0 1 2 210884489 210884511 mRNA hsa-miR-383 RPE miRanda miRanda
14034 chr2 210884499 210884499 1 + G A UCEC 210884517 + 210884497 210884537 41 ACGTTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGTTC ACATTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGTTC < 41bp 1 0.352445650977997 1 0.673643946647644 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 3 RPE ENSG00000197713 CDS Human protein_coding chr2:210884517 chr2:210884499 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_80990 0 0 1 2 210884486 210884508 mRNA hsa-miR-335 RPE miRanda miRanda
14034 chr17 61662602 61662602 1 + C T UCEC 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA TACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA < 41bp 1 0.795441494309928 1 0.00866895914077759 experiment 0.409117011380144 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662602 synonymous SNV . 0 hm6A_associated_SNPs_81031 0 0 1 2 61662599 61662620 mRNA hsa-miR-490-3p DCAF7 miRanda miRanda
14034 chr17 61662602 61662602 1 + C T UCEC 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA TACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA < 41bp 1 0.795441494309928 1 0.00866895914077759 experiment 0.409117011380144 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662602 synonymous SNV . 0 hm6A_associated_SNPs_81031 0 0 1 2 61662581 61662602 mRNA hsa-miR-873 DCAF7 miRanda miRanda
14034 chr7 92938187 92938187 1 + A C UCEC 92938185 + 92938165 92938205 41 CTATCAAGAGTATGACAGTGACAGTGATGTTCCTGAGGAAC CTATCAAGAGTATGACAGTGACCGTGATGTTCCTGAGGAAC < 41bp 1 0.10792833648361 1 0.987700223922729 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 VPS50 ENSG00000004766 CDS Human protein_coding chr7:92938185 chr7:92938187 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81040 0 0 1 1 92938180 92938200 mRNA hsa-miR-873 CCDC132 miRanda miRanda
14034 chr2 232660892 232660892 1 + C A UCEC 232660904 + 232660884 232660924 41 CATTGAGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG CATTGAGGATGTCTACACTGACATCATCCAGGGCAAGCTGG < 41bp 1 0.798908874140637 1 0.982414722442627 experiment 0.402182251718726 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 9 COPS7B ENSG00000144524 CDS Human protein_coding chr2:232660904 chr2:232660892 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81043 0 0 1 1 232660880 232660900 mRNA hsa-miR-194 COPS7B miRanda miRanda
14034 chrX 73046503 73046503 1 - C A UCEC 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAATACCTGGGGAAATCCCAAGATG Direct Loss 1 0.28641709340671 1 0.758759200572968 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046503 . . 0 hm6A_associated_SNPs_81044 0 0 1 4 73046493 73046513 lncRNA hsa-miR-2355-5p XIST miRanda starBase2
14034 chrX 73046503 73046503 1 - C A UCEC 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAATACCTGGGGAAATCCCAAGATG Direct Loss 1 0.28641709340671 1 0.758759200572968 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046503 . . 0 hm6A_associated_SNPs_81044 0 0 1 4 73046503 73046525 lncRNA hsa-miR-498 XIST miRanda starBase2
14034 chrX 73046503 73046503 1 - C A UCEC 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAATACCTGGGGAAATCCCAAGATG Direct Loss 1 0.28641709340671 1 0.758759200572968 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046503 . . 0 hm6A_associated_SNPs_81044 0 0 1 4 73046488 73046509 lncRNA hsa-miR-3167 XIST miRanda starBase2
14034 chrX 73046503 73046503 1 - C A UCEC 73046502 - 73046482 73046522 41 GGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATG GGAAGGATAGAAGCTTGAATACCTGGGGAAATCCCAAGATG Direct Loss 1 0.28641709340671 1 0.758759200572968 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control 20 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046502 chrX:73046503 . . 0 hm6A_associated_SNPs_81044 0 0 1 4 73046488 73046509 lncRNA hsa-miR-876-5p XIST miRanda starBase2
14034 chr4 76442038 76442038 1 + A G UCEC 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTGGTGTGAATGCAGCCGG < 41bp 1 0.489548769983543 1 0.350456923246384 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442038 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81063 0 0 1 5 76442026 76442044 mRNA hsa-miR-23a THAP6 miRanda miRanda
14034 chr4 76442038 76442038 1 + A G UCEC 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTGGTGTGAATGCAGCCGG < 41bp 1 0.489548769983543 1 0.350456923246384 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442038 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81063 0 0 1 5 76442018 76442039 mRNA hsa-miR-26a THAP6 miRanda miRanda
14034 chr4 76442038 76442038 1 + A G UCEC 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTGGTGTGAATGCAGCCGG < 41bp 1 0.489548769983543 1 0.350456923246384 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442038 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81063 0 0 1 5 76442019 76442039 mRNA hsa-miR-26b THAP6 miRanda miRanda
14034 chr4 76442038 76442038 1 + A G UCEC 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTGGTGTGAATGCAGCCGG < 41bp 1 0.489548769983543 1 0.350456923246384 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442038 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81063 0 0 1 5 76442024 76442044 mRNA hsa-miR-23b THAP6 miRanda miRanda
14034 chr4 76442038 76442038 1 + A G UCEC 76442033 + 76442013 76442053 41 TGGGTATTAGCAATGAAAAGACTTGATGTGAATGCAGCCGG TGGGTATTAGCAATGAAAAGACTTGGTGTGAATGCAGCCGG < 41bp 1 0.489548769983543 1 0.350456923246384 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 26 THAP6 ENSG00000174796 CDS Human protein_coding chr4:76442033 chr4:76442038 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81063 0 0 1 5 76442023 76442039 mRNA hsa-miR-1297 THAP6 miRanda miRanda
14034 chr5 37697813 37697813 1 + C T UCEC 37697803 + 37697783 37697823 41 GGCTCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTT GGCTCATGACTCGGGCACAGACACTTCTTGTGTGACTTTTT < 41bp 1 0.60572258614009 1 0.165892064571381 experiment 0.788554827719821 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697803 chr5:37697813 synonymous SNV . 0 hm6A_associated_SNPs_81102 0 0 0 2 37697796 37697815 mRNA hsa-miR-31 WDR70 miRanda miRanda
14034 chr5 37697813 37697813 1 + C T UCEC 37697803 + 37697783 37697823 41 GGCTCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTT GGCTCATGACTCGGGCACAGACACTTCTTGTGTGACTTTTT < 41bp 1 0.60572258614009 1 0.165892064571381 experiment 0.788554827719821 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 31 WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697803 chr5:37697813 synonymous SNV . 0 hm6A_associated_SNPs_81102 0 0 0 2 37697798 37697821 mRNA hsa-miR-224 WDR70 miRanda miRanda
14034 chr1 236969465 236969465 1 + G T UCEC 236969477 + 236969457 236969497 41 CTGGGGCAGATATCATTGAAACAAATACTTTTAGCAGCACT CTGGGGCATATATCATTGAAACAAATACTTTTAGCAGCACT < 41bp 1 0.58659891101987 1 0.0271730422973633 experiment 0.82680217796026 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 9 MTR ENSG00000116984 CDS Human protein_coding chr1:236969477 chr1:236969465 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81105 0 0 1 1 236969461 236969481 mRNA hsa-miR-599 MTR miRanda miRanda
14034 chr15 40326609 40326609 1 + T C UCEC 40326627 + 40326607 40326647 41 AGTCTGTGATGAAATTTATAACATCAAAGTAGAAAAAAAGT AGCCTGTGATGAAATTTATAACATCAAAGTAGAAAAAAAGT < 41bp 1 0.55306488462172 1 0.0514959990978241 experiment 0.893870230756559 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 3 EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40326627 chr15:40326609 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_81120 0 0 0 1 40326603 40326627 mRNA hsa-miR-340 EIF2AK4 miRanda miRanda
14034 chr7 102724260 102724260 1 + G A UCEC 102724252 + 102724232 102724272 41 AGCTTTGATTACTTTGGGTAACAATGCAGCCTTTTCAGTTA AGCTTTGATTACTTTGGGTAACAATGCAACCTTTTCAGTTA < 41bp 1 0.792349253949956 1 0.644819438457489 experiment 0.415301492100087 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 29 ARMC10 ENSG00000170632 CDS Human protein_coding chr7:102724252 chr7:102724260 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81149 0 0 0 2 102724241 102724260 mRNA hsa-miR-33a ARMC10 miRanda miRanda
14034 chr7 102724260 102724260 1 + G A UCEC 102724252 + 102724232 102724272 41 AGCTTTGATTACTTTGGGTAACAATGCAGCCTTTTCAGTTA AGCTTTGATTACTTTGGGTAACAATGCAACCTTTTCAGTTA < 41bp 1 0.792349253949956 1 0.644819438457489 experiment 0.415301492100087 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 29 ARMC10 ENSG00000170632 CDS Human protein_coding chr7:102724252 chr7:102724260 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81149 0 0 0 2 102724242 102724260 mRNA hsa-miR-33b ARMC10 miRanda miRanda
14034 chr1 231488740 231488740 1 + C T UCEC 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTTTC < 41bp 1 0.601368724947633 1 0.715646088123322 experiment 0.797262550104734 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488740 nonsynonymous SNV 0.043 1 hm6A_associated_SNPs_81164 0 0 1 2 231488721 231488743 mRNA hsa-miR-146a C1orf124 miRanda miRanda
14034 chr1 231488740 231488740 1 + C T UCEC 231488722 + 231488702 231488742 41 AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTCTC AGTTGGCAACATCCCTAAAAACTCAGTCTCTTCTAGTTTTC < 41bp 1 0.601368724947633 1 0.715646088123322 experiment 0.797262550104734 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;Control 39 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488722 chr1:231488740 nonsynonymous SNV 0.043 1 hm6A_associated_SNPs_81164 0 0 1 2 231488721 231488743 mRNA hsa-miR-146b-5p C1orf124 miRanda miRanda
14034 chrX 73045618 73045618 1 - G A UCEC 73045612 - 73045592 73045632 41 TATTGGCAATCATGCAGTTAACATTTGAAAGTGCAGTGTAA TATTGGCAATCATGTAGTTAACATTTGAAAGTGCAGTGTAA < 41bp 1 0.459786997496329 1 0.00592720508575439 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 15 TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045612 chrX:73045618 . . 0 hm6A_associated_SNPs_81178 0 0 1 1 73045614 73045636 lncRNA hsa-miR-6807-3p XIST miRanda starBase2
14034 chr6 4056622 4056622 1 + A G UCEC 4056627 + 4056607 4056647 41 ATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAGA ATGTTGCGGATAATGGCATAACACCTTATCTTGTCAGTAGA < 41bp 1 0.612966579387631 1 0.097443699836731 experiment 0.774066841224739 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4056627 chr6:4056622 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81195 0 0 1 2 4056612 4056634 mRNA hsa-miR-18a PRPF4B miRanda miRanda
14034 chr6 4056622 4056622 1 + A G UCEC 4056627 + 4056607 4056647 41 ATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAGA ATGTTGCGGATAATGGCATAACACCTTATCTTGTCAGTAGA < 41bp 1 0.612966579387631 1 0.097443699836731 experiment 0.774066841224739 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4056627 chr6:4056622 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81195 0 0 1 2 4056612 4056634 mRNA hsa-miR-18b PRPF4B miRanda miRanda
14034 chr3 196449371 196449371 1 + G A UCEC 196449373 + 196449353 196449393 41 AAACAGGACATTCCTGCAGGACTTTATGTGGATCCGTATGA AAACAGGACATTCCTGCAAGACTTTATGTGGATCCGTATGA < 41bp 1 0.518006645108127 1 0.860472679138184 experiment 0.963986709783745 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 PIGX ENSG00000163964 CDS Human protein_coding chr3:196449373 chr3:196449371 nonsynonymous SNV 0.906 4 hm6A_associated_SNPs_81205 0 0 1 1 196449368 196449389 mRNA hsa-miR-127-3p PIGX miRanda miRanda
14034 chr10 17277849 17277849 1 + T C UCEC 17277865 + 17277845 17277885 41 GATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTGAACCTGA GATTCCTCTGCCTCTTCCAAACTTTTCCTCCCTGAACCTGA < 41bp 1 0.516015919159296 1 0.132544487714767 experiment 0.967968161681407 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 5 VIM ENSG00000026025 CDS Human protein_coding chr10:17277865 chr10:17277849 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_81246 0 0 1 1 17277845 17277853 mRNA hsa-miR-539 VIM miRanda miRanda
14034 chr3 196449386 196449386 1 + C A UCEC 196449373 + 196449353 196449393 41 AAACAGGACATTCCTGCAGGACTTTATGTGGATCCGTATGA AAACAGGACATTCCTGCAGGACTTTATGTGGATACGTATGA < 41bp 1 0.578826218167462 1 0.920658528804779 experiment 0.842347563665076 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 34 PIGX ENSG00000163964 CDS Human protein_coding chr3:196449373 chr3:196449386 nonsynonymous SNV 0.984 4 hm6A_associated_SNPs_81276 0 0 1 1 196449368 196449389 mRNA hsa-miR-127-3p PIGX miRanda miRanda
14034 chr6 42987055 42987055 1 + G A UCEC 42987040 + 42987020 42987060 41 TTAAAGGCCCTAGTCTGAAGACTCTGTGCAAACTGGCCGTG TTAAAGGCCCTAGTCTGAAGACTCTGTGCAAACTGACCGTG < 41bp 1 0.451601184140089 1 0.425324857234955 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42987040 chr6:42987055 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_81281 0 0 1 1 42987053 42987075 mRNA hsa-miR-154 KLHDC3 miRanda miRanda
14034 chr20 29632719 29632719 1 + C G UCEC 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTCTGGAGAGGTAGCTATTTATTTACT Direct Loss 1 0.341592162327427 1 0.00104692578315735 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 22 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632719 nonsynonymous SNV 0.762 3 hm6A_associated_SNPs_81294 0 0 0 2 29632710 29632721 mRNA hsa-miR-378 FRG1B miRanda miRanda
14034 chr20 29632719 29632719 1 + C G UCEC 29632718 + 29632698 29632738 41 TTTGCATGAGACGCTTCTGGACAGGTAGCTATTTATTTACT TTTGCATGAGACGCTTCTGGAGAGGTAGCTATTTATTTACT Direct Loss 1 0.341592162327427 1 0.00104692578315735 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 22 FRG1BP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29632718 chr20:29632719 nonsynonymous SNV 0.762 3 hm6A_associated_SNPs_81294 0 0 0 2 29632709 29632721 mRNA hsa-miR-422a FRG1B miRanda miRanda
14034 chr7 98935896 98935896 1 + G A UCEC 98935880 + 98935860 98935900 41 CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACGGACA CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACAGACA < 41bp 1 0.421962740782852 1 0.629079222679138 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98935880 chr7:98935896 nonsynonymous SNV 0.812 3 hm6A_associated_SNPs_81296 0 0 1 3 98935891 98935908 mRNA hsa-miR-10a ARPC1A miRanda miRanda
14034 chr7 98935896 98935896 1 + G A UCEC 98935880 + 98935860 98935900 41 CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACGGACA CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACAGACA < 41bp 1 0.421962740782852 1 0.629079222679138 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98935880 chr7:98935896 nonsynonymous SNV 0.812 3 hm6A_associated_SNPs_81296 0 0 1 3 98935891 98935908 mRNA hsa-miR-10b ARPC1A miRanda miRanda
14034 chr7 98935896 98935896 1 + G A UCEC 98935880 + 98935860 98935900 41 CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACGGACA CAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAACAGACA < 41bp 1 0.421962740782852 1 0.629079222679138 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98935880 chr7:98935896 nonsynonymous SNV 0.812 3 hm6A_associated_SNPs_81296 0 0 1 3 98935882 98935904 mRNA hsa-miR-455-5p ARPC1A miRanda miRanda
14034 chr20 30156952 30156952 1 + C T UCEC 30156960 + 30156940 30156980 41 CTAAGGATCCAGCGGCAGTGACAGAATCCAAAGAGGGAACA CTAAGGATCCAGTGGCAGTGACAGAATCCAAAGAGGGAACA < 41bp 1 0.790262600937487 1 0.784163057804108 experiment 0.419474798125027 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 13 HM13 ENSG00000101294 CDS Human protein_coding chr20:30156960 chr20:30156952 nonsynonymous SNV 0.936 0 hm6A_associated_SNPs_81298 0 0 1 1 30156950 30156973 mRNA hsa-miR-9 HM13 miRanda miRanda
14034 chrX 77380839 77380839 1 + C T UCEC 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGTCACTTGCTGTGCCA < 41bp 1 0.644105436713075 1 0.0311807096004486 experiment 0.71178912657385 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380839 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_81380 0 0 1 6 77380834 77380855 mRNA hsa-miR-96 PGK1 miRanda miRanda
14034 chrX 77380839 77380839 1 + C T UCEC 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGTCACTTGCTGTGCCA < 41bp 1 0.644105436713075 1 0.0311807096004486 experiment 0.71178912657385 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380839 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_81380 0 0 1 6 77380824 77380841 mRNA hsa-miR-34a PGK1 miRanda miRanda
14034 chrX 77380839 77380839 1 + C T UCEC 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGTCACTTGCTGTGCCA < 41bp 1 0.644105436713075 1 0.0311807096004486 experiment 0.71178912657385 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380839 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_81380 0 0 1 6 77380824 77380841 mRNA hsa-miR-34c-5p PGK1 miRanda miRanda
14034 chrX 77380839 77380839 1 + C T UCEC 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGTCACTTGCTGTGCCA < 41bp 1 0.644105436713075 1 0.0311807096004486 experiment 0.71178912657385 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380839 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_81380 0 0 1 6 77380824 77380841 mRNA hsa-miR-449a PGK1 miRanda miRanda
14034 chrX 77380839 77380839 1 + C T UCEC 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGTCACTTGCTGTGCCA < 41bp 1 0.644105436713075 1 0.0311807096004486 experiment 0.71178912657385 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380839 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_81380 0 0 1 6 77380824 77380841 mRNA hsa-miR-449b PGK1 miRanda miRanda
14034 chrX 77380839 77380839 1 + C T UCEC 77380833 + 77380813 77380853 41 TCATTCAACAGGTGGTGGAGACACTGCCACTTGCTGTGCCA TCATTCAACAGGTGGTGGAGACACTGTCACTTGCTGTGCCA < 41bp 1 0.644105436713075 1 0.0311807096004486 experiment 0.71178912657385 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 27 PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380833 chrX:77380839 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_81380 0 0 1 6 77380836 77380855 mRNA hsa-miR-1271 PGK1 miRanda miRanda
14034 chr16 48368166 48368166 1 + C A UCEC 48368175 + 48368155 48368195 41 AAAACCTGAATCTATCAGTGACACTACTGACTTGGCTCTAC AAAACCTGAATATATCAGTGACACTACTGACTTGGCTCTAC < 41bp 1 0.638368762678716 1 0.654835343360901 experiment 0.723262474642568 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 12 LONP2 ENSG00000102910 CDS Human protein_coding chr16:48368175 chr16:48368166 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81421 0 0 0 1 48368160 48368182 mRNA hsa-miR-142-3p LONP2 miRanda miRanda
14034 chr6 137147487 137147487 1 + G A UCEC 137147501 + 137147481 137147521 41 TGATGTGACTTGGAGTGAGAACAACGAACATGTCCTCATCA TGATGTAACTTGGAGTGAGAACAACGAACATGTCCTCATCA < 41bp 1 0.755552426068187 1 0.0347515344619751 experiment 0.488895147863625 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 7 PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147501 chr6:137147487 synonymous SNV . 0 hm6A_associated_SNPs_81468 0 0 1 1 137147472 137147492 mRNA hsa-miR-224 PEX7 miRanda miRanda
14034 chr18 21110477 21110477 1 + G A UCEC 21110489 + 21110469 21110509 41 TTTTAGATGCTGCAAAGCAGACTGAAGACAACATGCTTTTC TTTTAGATACTGCAAAGCAGACTGAAGACAACATGCTTTTC < 41bp 1 0.314442158489021 1 0.988603472709656 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21110489 chr18:21110477 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81496 0 0 0 2 21110461 21110482 mRNA hsa-miR-103 C18orf8 miRanda miRanda
14034 chr18 21110477 21110477 1 + G A UCEC 21110489 + 21110469 21110509 41 TTTTAGATGCTGCAAAGCAGACTGAAGACAACATGCTTTTC TTTTAGATACTGCAAAGCAGACTGAAGACAACATGCTTTTC < 41bp 1 0.314442158489021 1 0.988603472709656 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 9 C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21110489 chr18:21110477 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81496 0 0 0 2 21110461 21110482 mRNA hsa-miR-107 C18orf8 miRanda miRanda
14034 chr6 43555133 43555133 1 + C T UCEC 43555120 + 43555100 43555140 41 ACCAGTGCTGTACAAGAGAGACTACAAAAGCTACAAGGTCA ACCAGTGCTGTACAAGAGAGACTACAAAAGCTATAAGGTCA < 41bp 1 0.599407164265561 1 0.919921636581421 experiment 0.801185671468879 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 34 POLH ENSG00000170734 CDS Human protein_coding chr6:43555120 chr6:43555133 stopgain 0.997 0 hm6A_associated_SNPs_81507 0 0 1 1 43555133 43555157 mRNA hsa-miR-346 POLH miRanda miRanda
14034 chr11 35250855 35250855 1 + A C UCEC 35250846 + 35250826 35250866 41 GACAGCTGATGAGACAAGGAACCTGCAGAATGTGGACATGA GACAGCTGATGAGACAAGGAACCTGCAGACTGTGGACATGA < 41bp 1 0.702986316957722 1 0.987536668777466 experiment 0.594027366084557 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 CD44 ENSG00000026508 CDS Human protein_coding chr11:35250846 chr11:35250855 nonsynonymous SNV 0.946 3 hm6A_associated_SNPs_81581 0 0 1 1 35250835 35250856 mRNA hsa-miR-544 CD44 miRanda miRanda
14034 chr2 201680190 201680190 1 + G A UCEC 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCATCGATATGC < 41bp 1 0.739746790744633 1 0.906840443611145 experiment 0.520506418510733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680190 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81589 0 0 1 4 201680180 201680203 mRNA hsa-miR-217 BZW1 miRanda miRanda
14034 chr2 201680190 201680190 1 + G A UCEC 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCATCGATATGC < 41bp 1 0.739746790744633 1 0.906840443611145 experiment 0.520506418510733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680190 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81589 0 0 1 4 201680180 201680201 mRNA hsa-miR-153 BZW1 miRanda miRanda
14034 chr2 201680190 201680190 1 + G A UCEC 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCATCGATATGC < 41bp 1 0.739746790744633 1 0.906840443611145 experiment 0.520506418510733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680190 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81589 0 0 1 4 201680179 201680201 mRNA hsa-miR-448 BZW1 miRanda miRanda
14034 chr2 201680190 201680190 1 + G A UCEC 201680179 + 201680159 201680199 41 CTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGC CTTGATGCTTCTGGAGCAAAACTTGATTACCATCGATATGC < 41bp 1 0.739746790744633 1 0.906840443611145 experiment 0.520506418510733 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 32 BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680179 chr2:201680190 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81589 0 0 1 4 201680182 201680204 mRNA hsa-miR-544 BZW1 miRanda miRanda
14034 chr3 10094113 10094113 1 + C T UCEC 10094093 + 10094073 10094113 41 CATTTTAGATTATCTGGATAACATATCCCCTCAGCAAATAC CATTTTAGATTATCTGGATAACATATCCCCTCAGCAAATAT < 41bp 1 0.596447108556523 1 0.000123918056488037 experiment 0.807105782886955 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 41 FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10094093 chr3:10094113 stopgain 1.000 1 hm6A_associated_SNPs_81633 0 0 1 1 10094110 10094130 mRNA hsa-miR-376c FANCD2 miRanda miRanda
14034 chr2 44457760 44457760 1 + C T UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAACAGTGATGCTGGAAACCCAGTGATAATGCAGGAAA < 41bp 1 0.163468358176859 1 0.945957601070404 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457760 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81649 0 0 1 7 44457747 44457767 mRNA hsa-miR-33a PPM1B miRanda miRanda
14034 chr2 44457760 44457760 1 + C T UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAACAGTGATGCTGGAAACCCAGTGATAATGCAGGAAA < 41bp 1 0.163468358176859 1 0.945957601070404 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457760 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81649 0 0 1 7 44457740 44457764 mRNA hsa-miR-92a PPM1B miRanda miRanda
14034 chr2 44457760 44457760 1 + C T UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAACAGTGATGCTGGAAACCCAGTGATAATGCAGGAAA < 41bp 1 0.163468358176859 1 0.945957601070404 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457760 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81649 0 0 1 7 44457757 44457777 mRNA hsa-miR-135a PPM1B miRanda miRanda
14034 chr2 44457760 44457760 1 + C T UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAACAGTGATGCTGGAAACCCAGTGATAATGCAGGAAA < 41bp 1 0.163468358176859 1 0.945957601070404 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457760 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81649 0 0 1 7 44457740 44457764 mRNA hsa-miR-363 PPM1B miRanda miRanda
14034 chr2 44457760 44457760 1 + C T UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAACAGTGATGCTGGAAACCCAGTGATAATGCAGGAAA < 41bp 1 0.163468358176859 1 0.945957601070404 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457760 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81649 0 0 1 7 44457757 44457777 mRNA hsa-miR-135b PPM1B miRanda miRanda
14034 chr2 44457760 44457760 1 + C T UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAACAGTGATGCTGGAAACCCAGTGATAATGCAGGAAA < 41bp 1 0.163468358176859 1 0.945957601070404 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457760 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81649 0 0 1 7 44457740 44457764 mRNA hsa-miR-92b PPM1B miRanda miRanda
14034 chr2 44457760 44457760 1 + C T UCEC 44457751 + 44457731 44457771 41 TTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGGAAA TTCGAACAGTGATGCTGGAAACCCAGTGATAATGCAGGAAA < 41bp 1 0.163468358176859 1 0.945957601070404 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457751 chr2:44457760 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_81649 0 0 1 7 44457748 44457767 mRNA hsa-miR-33b PPM1B miRanda miRanda
14034 chr8 30614366 30614366 1 + G T UCEC 30614363 + 30614343 30614383 41 AGAACTTGCCTAAACCTTTAACTGAATTTCCGTCTCCTGCT AGAACTTGCCTAAACCTTTAACTTAATTTCCGTCTCCTGCT < 41bp 1 0.0919899461322942 1 0.115404576063156 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control 24 UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30614363 chr8:30614366 . 0.001 0 hm6A_associated_SNPs_81693 0 0 1 1 30614363 30614385 mRNA hsa-miR-214 UBXN8 miRanda miRanda
14034 chr8 30614366 30614366 1 + G T UCEC 30614386 + 30614366 30614406 41 GAATTTCCGTCTCCTGCTGAACAGCCCACATGCAAGGAGGT TAATTTCCGTCTCCTGCTGAACAGCCCACATGCAAGGAGGT < 41bp 1 0.123773520395229 1 0.193943113088608 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 1 UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30614386 chr8:30614366 . 0.001 0 hm6A_associated_SNPs_81694 0 0 1 1 30614363 30614385 mRNA hsa-miR-214 UBXN8 miRanda miRanda
14034 chr3 160129710 160129710 1 + T G UCEC 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGGGGGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.625411739448573 1 0.842788815498352 experiment 0.749176521102854 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129710 stoploss . 0 hm6A_associated_SNPs_81713 0 0 1 5 160129708 160129711 mRNA hsa-miR-10a SMC4 miRanda miRanda
14034 chr3 160129710 160129710 1 + T G UCEC 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGGGGGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.625411739448573 1 0.842788815498352 experiment 0.749176521102854 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129710 stoploss . 0 hm6A_associated_SNPs_81713 0 0 1 5 160129708 160129711 mRNA hsa-miR-10b SMC4 miRanda miRanda
14034 chr3 160129710 160129710 1 + T G UCEC 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGGGGGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.625411739448573 1 0.842788815498352 experiment 0.749176521102854 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129710 stoploss . 0 hm6A_associated_SNPs_81713 0 0 1 5 160129708 160129723 mRNA hsa-miR-375 SMC4 miRanda miRanda
14034 chr3 160129710 160129710 1 + T G UCEC 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGGGGGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.625411739448573 1 0.842788815498352 experiment 0.749176521102854 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129710 stoploss . 0 hm6A_associated_SNPs_81713 0 0 1 5 160129708 160129710 mRNA hsa-miR-339-5p SMC4 miRanda miRanda
14034 chr3 160129710 160129710 1 + T G UCEC 160129719 + 160129699 160129739 41 TTTTTAAAGGGTGAAGTTGAACAAATTGCTATGATGAAACC TTTTTAAAGGGGGAAGTTGAACAAATTGCTATGATGAAACC < 41bp 1 0.625411739448573 1 0.842788815498352 experiment 0.749176521102854 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 12 SMC4 ENSG00000113810 CDS Human protein_coding chr3:160129719 chr3:160129710 stoploss . 0 hm6A_associated_SNPs_81713 0 0 1 5 160129708 160129712 mRNA hsa-miR-504 SMC4 miRanda miRanda
14034 chr5 172377713 172377713 1 + T C UCEC 172377733 + 172377713 172377753 41 TCTGTGCCATCATTGGCGGGACCTTCACCGTCGCCGGCATC CCTGTGCCATCATTGGCGGGACCTTCACCGTCGCCGGCATC < 41bp 1 0.786333251041016 1 0.939368724822998 experiment 0.427333497917967 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172377733 chr5:172377713 nonsynonymous SNV 0.986 2 hm6A_associated_SNPs_81729 0 0 1 1 172377712 172377723 mRNA hsa-miR-183 ERGIC1 miRanda miRanda
14034 chr11 34474692 34474692 1 + C T UCEC 34474676 + 34474656 34474696 41 GCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGAC GCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCTGGAC < 41bp 1 0.652758052811864 1 0.124801248311996 experiment 0.694483894376271 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 37 CAT ENSG00000121691 CDS Human protein_coding chr11:34474676 chr11:34474692 nonsynonymous SNV 0.868 4 hm6A_associated_SNPs_81731 0 0 1 1 34474673 34474694 mRNA hsa-miR-127-3p CAT miRanda miRanda
14034 chr2 37474684 37474684 1 + G A UCEC 37474669 + 37474649 37474689 41 AGATCTAACAGCTGATGTGGACTTCAGTTATTTGCGAAGAA AGATCTAACAGCTGATGTGGACTTCAGTTATTTGCAAAGAA < 41bp 1 0.51152825755447 1 0.936575710773468 experiment 0.976943484891061 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 36 NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37474669 chr2:37474684 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_81739 0 0 1 1 37474678 37474700 mRNA hsa-miR-339-5p C2orf56 miRanda miRanda
14034 chr8 124089382 124089382 1 + G A UCEC 124089362 + 124089342 124089382 41 CTTTGACAGAATTATAGTGAACATTATTCACAACACTTCCG CTTTGACAGAATTATAGTGAACATTATTCACAACACTTCCA < 41bp 1 0.486536061596313 1 0.40824955701828 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124089362 chr8:124089382 nonsynonymous SNV 0.926 0 hm6A_associated_SNPs_81779 0 0 1 2 124089360 124089382 mRNA hsa-miR-1 WDR67 miRanda miRanda
14034 chr8 124089382 124089382 1 + G A UCEC 124089362 + 124089342 124089382 41 CTTTGACAGAATTATAGTGAACATTATTCACAACACTTCCG CTTTGACAGAATTATAGTGAACATTATTCACAACACTTCCA < 41bp 1 0.486536061596313 1 0.40824955701828 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124089362 chr8:124089382 nonsynonymous SNV 0.926 0 hm6A_associated_SNPs_81779 0 0 1 2 124089360 124089382 mRNA hsa-miR-206 WDR67 miRanda miRanda
14034 chr19 6750544 6750544 1 + A C UCEC 6750555 + 6750535 6750575 41 TCCCTCAGAAGAGAGCCAGGACACCCCCATTTACACGGAGT TCCCTCAGACGAGAGCCAGGACACCCCCATTTACACGGAGT < 41bp 1 0.696036387742959 1 0.739731907844543 experiment 0.607927224514083 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750555 chr19:6750544 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_81791 0 0 0 1 6750533 6750554 mRNA hsa-miR-149 TRIP10 miRanda miRanda
14034 chr7 158704342 158704342 1 + G T UCEC 158704330 + 158704310 158704350 41 ACCACCAGTAAATGAATATGACATGTATATCAGAAACTTTG ACCACCAGTAAATGAATATGACATGTATATCATAAACTTTG < 41bp 1 0.562592656212289 1 0.207301288843155 experiment 0.874814687575422 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 33 WDR60 ENSG00000126870 CDS Human protein_coding chr7:158704330 chr7:158704342 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_81815 0 0 0 1 158704334 158704355 mRNA hsa-miR-150 WDR60 miRanda miRanda
14034 chr20 62701639 62701639 1 + G T UCEC 62701634 + 62701614 62701654 41 CATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA CATCTTCCGGGACGTTGGAAACACATACATGAAGTATAAGA < 41bp 1 0.451619926976608 1 0.967788815498352 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 26 TCEA2 ENSG00000171703 CDS Human protein_coding chr20:62701634 chr20:62701639 nonsynonymous SNV 0.961 4 hm6A_associated_SNPs_81824 0 0 0 1 62701627 62701649 mRNA hsa-miR-205 TCEA2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983334 69983356 mRNA hsa-miR-17 CCT2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983334 69983356 mRNA hsa-miR-20a CCT2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983334 69983356 mRNA hsa-miR-93 CCT2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983334 69983356 mRNA hsa-miR-106a CCT2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983333 69983354 mRNA hsa-miR-140-5p CCT2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983336 69983356 mRNA hsa-miR-106b CCT2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983334 69983356 mRNA hsa-miR-20b CCT2 miRanda miRanda
14034 chr12 69983347 69983347 1 + G T UCEC 69983348 + 69983328 69983368 41 ACTTCTTACTCATCACAAAGACCACTTTACAAAGTTAGCTG ACTTCTTACTCATCACAAATACCACTTTACAAAGTTAGCTG Direct Loss 1 0.409447316338081 1 0.0816759765148163 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 20 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69983348 chr12:69983347 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_81860 0 0 1 8 69983335 69983356 mRNA hsa-miR-519d CCT2 miRanda miRanda
14034 chr2 182781125 182781125 1 + A C UCEC 182781132 + 182781112 182781152 41 AGTATTACATGATATTAGAAACTCACTGCAGAATCTTTCAC AGTATTACATGATCTTAGAAACTCACTGCAGAATCTTTCAC < 41bp 1 0.712531239816915 1 0.77617472410202 experiment 0.574937520366169 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 14 SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182781132 chr2:182781125 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_81869 0 0 1 1 182781119 182781145 mRNA hsa-miR-544 SSFA2 miRanda miRanda
14034 chr14 90870756 90870756 1 + C T UCEC 90870772 + 90870752 90870792 41 ACTACGTCACGTCATGACAAACTTAGGAGAAAAACTAACAG ACTATGTCACGTCATGACAAACTTAGGAGAAAAACTAACAG < 41bp 1 0.541415516313766 1 0.855826795101166 experiment 0.917168967372469 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 5 CALM1 ENSG00000198668 CDS Human protein_coding chr14:90870772 chr14:90870756 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_81875 0 0 1 1 90870754 90870776 mRNA hsa-miR-382 CALM1 miRanda miRanda
14034 chr5 162868320 162868320 1 + G T UCEC 162868322 + 162868302 162868342 41 TTATTCACTCCTTCAAGAGAACTTGCCACTTGAAAGGTAAG TTATTCACTCCTTCAAGATAACTTGCCACTTGAAAGGTAAG < 41bp 1 0.274022984270101 1 0.479462206363678 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 19 CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162868322 chr5:162868320 nonsynonymous SNV 0.991 0 hm6A_associated_SNPs_81879 0 0 1 1 162868309 162868332 mRNA hsa-miR-454 CCNG1 miRanda miRanda
14034 chr12 3049855 3049855 1 + C T UCEC 3049843 + 3049823 3049863 41 GACCTCCCTTCTGTGGACTGACCTCTCACCTCCGCCTGTTG GACCTCCCTTCTGTGGACTGACCTCTCACCTCTGCCTGTTG < 41bp 1 0.745797737685703 1 0.939916849136353 experiment 0.508404524628594 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 TULP3 ENSG00000078246 CDS Human protein_coding chr12:3049843 chr12:3049855 nonsynonymous SNV 0.001 1 hm6A_associated_SNPs_81901 0 0 1 1 3049850 3049870 mRNA hsa-miR-873 TULP3 miRanda miRanda
14034 chr10 1038582 1038582 1 + G T UCEC 1038563 + 1038543 1038583 41 CAACAGAATTACCATGATAGACTTTCACAAATTCTAACAGA CAACAGAATTACCATGATAGACTTTCACAAATTCTAACATA < 41bp 1 0.538473610720725 1 0.846771478652954 experiment 0.923052778558551 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 40 GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1038563 chr10:1038582 nonsynonymous SNV 0.970 4 hm6A_associated_SNPs_81924 0 0 1 1 1038572 1038593 mRNA hsa-miR-491-5p GTPBP4 miRanda miRanda
14034 chrX 114856667 114856667 1 + G A UCEC 114856661 + 114856641 114856681 41 GTGAGAGAAATTATTCAGAAACTCATGCTGGATGGTGACAG GTGAGAGAAATTATTCAGAAACTCATACTGGATGGTGACAG < 41bp 1 0.147385649894476 1 0.740899324417114 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856661 chrX:114856667 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_81928 0 0 1 2 114856653 114856672 mRNA hsa-miR-338-3p PLS3 miRanda miRanda
14034 chrX 114856667 114856667 1 + G A UCEC 114856661 + 114856641 114856681 41 GTGAGAGAAATTATTCAGAAACTCATGCTGGATGGTGACAG GTGAGAGAAATTATTCAGAAACTCATACTGGATGGTGACAG < 41bp 1 0.147385649894476 1 0.740899324417114 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856661 chrX:114856667 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_81928 0 0 1 2 114856659 114856684 mRNA hsa-miR-339-5p PLS3 miRanda miRanda
14034 chrX 114856667 114856667 1 + G A UCEC 114856678 + 114856658 114856698 41 GAAACTCATGCTGGATGGTGACAGGAATAAAGATGGGAAAA GAAACTCATACTGGATGGTGACAGGAATAAAGATGGGAAAA < 41bp 1 0.352229286301665 1 0.349691599607468 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856678 chrX:114856667 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_81929 0 0 1 2 114856653 114856672 mRNA hsa-miR-338-3p PLS3 miRanda miRanda
14034 chrX 114856667 114856667 1 + G A UCEC 114856678 + 114856658 114856698 41 GAAACTCATGCTGGATGGTGACAGGAATAAAGATGGGAAAA GAAACTCATACTGGATGGTGACAGGAATAAAGATGGGAAAA < 41bp 1 0.352229286301665 1 0.349691599607468 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 10 PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856678 chrX:114856667 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_81929 0 0 1 2 114856659 114856684 mRNA hsa-miR-339-5p PLS3 miRanda miRanda
14034 chr1 230410232 230410232 1 + T G UCEC 230410252 + 230410232 230410272 41 TTTGTGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA GTTGTGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA < 41bp 1 0.427406955649434 1 0.0856462419033051 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230410252 chr1:230410232 nonsynonymous SNV 0.979 1 hm6A_associated_SNPs_82010 0 0 1 2 230410224 230410242 mRNA hsa-miR-124 GALNT2 miRanda miRanda
14034 chr1 230410232 230410232 1 + T G UCEC 230410252 + 230410232 230410272 41 TTTGTGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA GTTGTGCCTTACTGTGGTGGACCGGGCACCGGGCTCTCTTA < 41bp 1 0.427406955649434 1 0.0856462419033051 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 1 GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230410252 chr1:230410232 nonsynonymous SNV 0.979 1 hm6A_associated_SNPs_82010 0 0 1 2 230410222 230410242 mRNA hsa-miR-506 GALNT2 miRanda miRanda
14034 chr4 178274615 178274615 1 + A C UCEC 178274599 + 178274579 178274619 41 GAACTACAACTCTTGTCTTGACTGATTTTAGCAATAAATCC GAACTACAACTCTTGTCTTGACTGATTTTAGCAATACATCC < 41bp 1 0.640521637321969 1 0.993757605552673 experiment 0.718956725356062 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274599 chr4:178274615 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_82042 0 0 1 2 178274594 178274615 mRNA hsa-miR-137 NEIL3 miRanda miRanda
14034 chr4 178274615 178274615 1 + A C UCEC 178274599 + 178274579 178274619 41 GAACTACAACTCTTGTCTTGACTGATTTTAGCAATAAATCC GAACTACAACTCTTGTCTTGACTGATTTTAGCAATACATCC < 41bp 1 0.640521637321969 1 0.993757605552673 experiment 0.718956725356062 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274599 chr4:178274615 nonsynonymous SNV 0.991 4 hm6A_associated_SNPs_82042 0 0 1 2 178274598 178274620 mRNA hsa-miR-876-5p NEIL3 miRanda miRanda
14034 chr12 98921733 98921733 1 + A C UCEC 98921721 + 98921701 98921741 41 ATAAAGATGATCTAGATGTAACAGAGCTCACTAATGAAGAT ATAAAGATGATCTAGATGTAACAGAGCTCACTCATGAAGAT < 41bp 1 0.685277201795715 1 0.966795146465302 experiment 0.62944559640857 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 33 TMPO ENSG00000120802 CDS Human protein_coding chr12:98921721 chr12:98921733 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_82088 0 0 1 1 98921707 98921733 mRNA hsa-miR-708 TMPO miRanda miRanda
14034 chr7 33313469 33313469 1 + G A UCEC 33313450 + 33313430 33313470 41 AACTTACAGTTTCTGAAGGAACAATAAATACTTTGATTGGA AACTTACAGTTTCTGAAGGAACAATAAATACTTTGATTGAA < 41bp 1 0.305856112362653 1 0.660931825637817 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 BBS9 ENSG00000122507 CDS Human protein_coding chr7:33313450 chr7:33313469 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_82106 0 0 0 2 33313468 33313490 mRNA hsa-miR-103 BBS9 miRanda miRanda
14034 chr7 33313469 33313469 1 + G A UCEC 33313450 + 33313430 33313470 41 AACTTACAGTTTCTGAAGGAACAATAAATACTTTGATTGGA AACTTACAGTTTCTGAAGGAACAATAAATACTTTGATTGAA < 41bp 1 0.305856112362653 1 0.660931825637817 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 40 BBS9 ENSG00000122507 CDS Human protein_coding chr7:33313450 chr7:33313469 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_82106 0 0 0 2 33313468 33313490 mRNA hsa-miR-107 BBS9 miRanda miRanda
14034 chrX 118587016 118587016 1 + A G UCEC 118587001 + 118586981 118587021 41 AAGTTCTTCAAAACGAGAAAACCGAAGCCTAAAAAACCAAC AAGTTCTTCAAAACGAGAAAACCGAAGCCTAAAAAGCCAAC < 41bp 1 0.650471377714163 1 0.786707520484924 experiment 0.699057244571674 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 36 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587001 chrX:118587016 synonymous SNV . 0 hm6A_associated_SNPs_82130 0 0 1 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chr6 31432008 31432008 1 + C A UCEC 31431995 + 31431975 31432015 41 CTTCCTACTGAGATTACAGAACTGTAGAGATGTCTTTGATT CTTCCTACTGAGATTACAGAACTGTAGAGATGTATTTGATT < 41bp 1 0.430368929407573 1 0.789068818092346 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 34 HCP5 ENSG00000206337 ncRNA_exonic Human sense_overlapping chr6:31431995 chr6:31432008 . . 0 hm6A_associated_SNPs_82204 0 0 1 1 31431987 31432012 mRNA hsa-miR-186 HCP5 miRanda miRanda
14034 chr1 156203466 156203466 1 + G T UCEC 156203450 + 156203430 156203470 41 TGACATCAAAGAGGAGGGGAACCTAGAAGCTGTCTTGAATG TGACATCAAAGAGGAGGGGAACCTAGAAGCTGTCTTTAATG < 41bp 1 0.295499189522537 1 0.0463121831417084 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 37 PMF1;PMF1-BGLAP ENSG00000160783;ENSG00000260238 CDS Human other chr1:156203450 chr1:156203466 nonsynonymous SNV 0.985 1 hm6A_associated_SNPs_82206 0 0 1 1 156203466 156203485 mRNA hsa-miR-590-3p PMF1 miRanda miRanda
14034 chr1 47838645 47838645 1 + G A UCEC 47838639 + 47838619 47838659 41 TCCTTTAGGAAATGGATCAGACAATGGCTGCCAATGCTCAG TCCTTTAGGAAATGGATCAGACAATGACTGCCAATGCTCAG < 41bp 1 0.764066857339454 1 0.941197276115417 experiment 0.471866285321092 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838639 chr1:47838645 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_82209 0 0 1 2 47838628 47838650 mRNA hsa-miR-103 CMPK1 miRanda miRanda
14034 chr1 47838645 47838645 1 + G A UCEC 47838639 + 47838619 47838659 41 TCCTTTAGGAAATGGATCAGACAATGGCTGCCAATGCTCAG TCCTTTAGGAAATGGATCAGACAATGACTGCCAATGCTCAG < 41bp 1 0.764066857339454 1 0.941197276115417 experiment 0.471866285321092 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 27 CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838639 chr1:47838645 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_82209 0 0 1 2 47838628 47838650 mRNA hsa-miR-107 CMPK1 miRanda miRanda
14034 chr3 130735074 130735074 1 + G T UCEC 130735068 + 130735048 130735088 41 TGGAGACAGGACTGCCACTGACAGAAGATGTGAGCTGTGTC TGGAGACAGGACTGCCACTGACAGAATATGTGAGCTGTGTC < 41bp 1 0.688481494802837 1 0.742996692657471 experiment 0.623037010394327 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 27 ASTE1;ATP2C1 ENSG00000017260;ENSG00000034533 CDS Human other chr3:130735068 chr3:130735074 nonsynonymous SNV 0.987 1 hm6A_associated_SNPs_82213 0 0 0 1 130735060 130735083 mRNA hsa-miR-221 ATP2C1 miRanda miRanda
14034 chr1 203276539 203276539 1 + G T UCEC 203276541 + 203276521 203276561 41 CCGGAGCAGCCCCTCCAAGAACTACGTGATGGCAGTCTCCA CCGGAGCAGCCCCTCCAATAACTACGTGATGGCAGTCTCCA < 41bp 1 0.743975374218734 1 0.983510613441467 experiment 0.512049251562533 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276541 chr1:203276539 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_82230 0 0 0 1 203276534 203276557 mRNA hsa-miR-217 BTG2 miRanda miRanda
14034 chr18 2703765 2703765 1 + A C UCEC 2703758 + 2703738 2703778 41 TGTCATGAGAAGTATGATAAACAAATAAAATTTACACTTTT TGTCATGAGAAGTATGATAAACAAATACAATTTACACTTTT < 41bp 1 0.678834859536197 1 0.302836716175079 experiment 0.642330280927606 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 28 SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2703758 chr18:2703765 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_82254 0 0 1 1 2703748 2703770 mRNA hsa-miR-590-3p SMCHD1 miRanda miRanda
14034 chr12 95676321 95676321 1 + C T UCEC 95676302 + 95676282 95676322 41 AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACCG AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACTG < 41bp 1 0.394072301844288 1 0.428267180919647 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676302 chr12:95676321 nonsynonymous SNV 0.278 0 hm6A_associated_SNPs_82268 0 0 1 2 95676311 95676330 mRNA hsa-miR-141 VEZT miRanda miRanda
14034 chr12 95676321 95676321 1 + C T UCEC 95676302 + 95676282 95676322 41 AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACCG AGTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACTG < 41bp 1 0.394072301844288 1 0.428267180919647 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 VEZT ENSG00000028203 CDS Human protein_coding chr12:95676302 chr12:95676321 nonsynonymous SNV 0.278 0 hm6A_associated_SNPs_82268 0 0 1 2 95676311 95676330 mRNA hsa-miR-200a VEZT miRanda miRanda
14034 chr7 104747882 104747882 1 + A C UCEC 104747866 + 104747846 104747886 41 CTTTTAGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAA CTTTTAGAAATTCTAATTTAACTGAACTGGGTCTGCCAGAA < 41bp 1 0.686502158052711 1 0.965887248516083 experiment 0.626995683894578 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 37 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747866 chr7:104747882 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_82326 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chr7 104747882 104747882 1 + A C UCEC 104747871 + 104747851 104747891 41 AGAAATTCTAATTTAACTGAACTGGGTCTGCAAGAAATAAA AGAAATTCTAATTTAACTGAACTGGGTCTGCCAGAAATAAA < 41bp 1 0.769160819716148 1 0.990824341773987 experiment 0.461678360567703 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;Control 32 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747871 chr7:104747882 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_82327 0 0 1 1 104747867 104747887 mRNA hsa-miR-431 MLL5 miRanda miRanda
14034 chr9 74526731 74526731 1 + C T UCEC 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTTGATAAAAGTGTGC < 41bp 1 0.516358439168775 1 0.706682801246643 experiment 0.96728312166245 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526731 nonsynonymous SNV . 0 hm6A_associated_SNPs_82418 0 0 1 2 74526727 74526749 mRNA hsa-miR-346 C9orf85 miRanda miRanda
14034 chr9 74526731 74526731 1 + C T UCEC 74526724 + 74526704 74526744 41 TACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGC TACGTTTAGCTTCAAAAATGACAAGTTTGATAAAAGTGTGC < 41bp 1 0.516358439168775 1 0.706682801246643 experiment 0.96728312166245 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526724 chr9:74526731 nonsynonymous SNV . 0 hm6A_associated_SNPs_82418 0 0 1 2 74526726 74526749 mRNA hsa-miR-544 C9orf85 miRanda miRanda
14034 chr16 85942746 85942746 1 + G A UCEC 85942726 + 85942706 85942746 41 GACGGACCGGTCCCAACTGGACATTTCCGAGCCATACAAAG GACGGACCGGTCCCAACTGGACATTTCCGAGCCATACAAAA < 41bp 1 0.629012179542457 1 0.989060878753662 experiment 0.741975640915086 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 IRF8 ENSG00000140968 CDS Human protein_coding chr16:85942726 chr16:85942746 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_82431 0 0 0 2 85942741 85942765 mRNA hsa-miR-873 IRF8 miRanda miRanda
14034 chr16 85942746 85942746 1 + G A UCEC 85942726 + 85942706 85942746 41 GACGGACCGGTCCCAACTGGACATTTCCGAGCCATACAAAG GACGGACCGGTCCCAACTGGACATTTCCGAGCCATACAAAA < 41bp 1 0.629012179542457 1 0.989060878753662 experiment 0.741975640915086 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 41 IRF8 ENSG00000140968 CDS Human protein_coding chr16:85942726 chr16:85942746 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_82431 0 0 0 2 85942741 85942761 mRNA hsa-miR-543 IRF8 miRanda miRanda
14034 chr1 236969462 236969462 1 + G A UCEC 236969477 + 236969457 236969497 41 CTGGGGCAGATATCATTGAAACAAATACTTTTAGCAGCACT CTGGGACAGATATCATTGAAACAAATACTTTTAGCAGCACT < 41bp 1 0.559505063095511 1 0.0784086287021637 experiment 0.880989873808979 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 6 MTR ENSG00000116984 CDS Human protein_coding chr1:236969477 chr1:236969462 nonsynonymous SNV 0.989 4 hm6A_associated_SNPs_82444 0 0 1 1 236969461 236969481 mRNA hsa-miR-599 MTR miRanda miRanda
14034 chr17 1943538 1943538 1 + C T UCEC 1943545 + 1943525 1943565 41 AGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCAT AGCAAAGTCCTATTCAGAGAACACTATGACCACCAGCGCAT < 41bp 1 0.779868912178727 1 0.594696521759033 experiment 0.440262175642545 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 14 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943545 chr17:1943538 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_82488 0 0 1 1 1943525 1943544 mRNA hsa-miR-326 DPH1 miRanda miRanda
14034 chr17 56780563 56780563 1 + G A UCEC 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCAAAAAGCTTTGGAGGA < 41bp 1 0.556384677842868 1 0.0382287800312042 experiment 0.887230644314264 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780563 nonsynonymous SNV 0.085 0 hm6A_associated_SNPs_82519 2 0 1 5 56780563 56780584 mRNA hsa-miR-203 RAD51C miRanda miRanda
14034 chr17 56780563 56780563 1 + G A UCEC 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCAAAAAGCTTTGGAGGA < 41bp 1 0.556384677842868 1 0.0382287800312042 experiment 0.887230644314264 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780563 nonsynonymous SNV 0.085 0 hm6A_associated_SNPs_82519 2 0 1 5 56780557 56780573 mRNA hsa-miR-320a RAD51C miRanda miRanda
14034 chr17 56780563 56780563 1 + G A UCEC 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCAAAAAGCTTTGGAGGA < 41bp 1 0.556384677842868 1 0.0382287800312042 experiment 0.887230644314264 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780563 nonsynonymous SNV 0.085 0 hm6A_associated_SNPs_82519 2 0 1 5 56780557 56780573 mRNA hsa-miR-320b RAD51C miRanda miRanda
14034 chr17 56780563 56780563 1 + G A UCEC 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCAAAAAGCTTTGGAGGA < 41bp 1 0.556384677842868 1 0.0382287800312042 experiment 0.887230644314264 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780563 nonsynonymous SNV 0.085 0 hm6A_associated_SNPs_82519 2 0 1 5 56780557 56780573 mRNA hsa-miR-320c RAD51C miRanda miRanda
14034 chr17 56780563 56780563 1 + G A UCEC 56780558 + 56780538 56780578 41 GAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGA GAGTGTTTTGTTGTTTCAGAACACCAAAAAGCTTTGGAGGA < 41bp 1 0.556384677842868 1 0.0382287800312042 experiment 0.887230644314264 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 RAD51C ENSG00000108384 CDS Human protein_coding chr17:56780558 chr17:56780563 nonsynonymous SNV 0.085 0 hm6A_associated_SNPs_82519 2 0 1 5 56780557 56780573 mRNA hsa-miR-320d RAD51C miRanda miRanda
14034 chr10 38654428 38654428 1 + C T UCEC 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTTGCAATGCAAGG < 41bp 1 0.335195518738467 1 0.954003930091858 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654428 . . 0 hm6A_associated_SNPs_82544 0 0 1 3 38654417 38654437 mRNA hsa-miR-33a HSD17B7P2 miRanda miRanda
14034 chr10 38654428 38654428 1 + C T UCEC 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTTGCAATGCAAGG < 41bp 1 0.335195518738467 1 0.954003930091858 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654428 . . 0 hm6A_associated_SNPs_82544 0 0 1 3 38654407 38654429 mRNA hsa-miR-143 HSD17B7P2 miRanda miRanda
14034 chr10 38654428 38654428 1 + C T UCEC 38654419 + 38654399 38654439 41 ATCCATCTCAGCTCATCTGGACATCATCTCGCAATGCAAGG ATCCATCTCAGCTCATCTGGACATCATCTTGCAATGCAAGG < 41bp 1 0.335195518738467 1 0.954003930091858 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 30 HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654419 chr10:38654428 . . 0 hm6A_associated_SNPs_82544 0 0 1 3 38654418 38654437 mRNA hsa-miR-33b HSD17B7P2 miRanda miRanda
14034 chr16 50250067 50250067 1 + C T UCEC 50250058 + 50250038 50250078 41 CTGGAAGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGA CTGGAAGAAGCTCTTCGGAAACACAAAGTTGCAGATGAGGA < 41bp 1 0.478603229939033 1 0.922449290752411 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50250058 chr16:50250067 synonymous SNV . 0 hm6A_associated_SNPs_82685 0 0 1 3 50250060 50250081 mRNA hsa-miR-216a PAPD5 miRanda miRanda
14034 chr16 50250067 50250067 1 + C T UCEC 50250058 + 50250038 50250078 41 CTGGAAGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGA CTGGAAGAAGCTCTTCGGAAACACAAAGTTGCAGATGAGGA < 41bp 1 0.478603229939033 1 0.922449290752411 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50250058 chr16:50250067 synonymous SNV . 0 hm6A_associated_SNPs_82685 0 0 1 3 50250049 50250072 mRNA hsa-miR-378 PAPD5 miRanda miRanda
14034 chr16 50250067 50250067 1 + C T UCEC 50250058 + 50250038 50250078 41 CTGGAAGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGA CTGGAAGAAGCTCTTCGGAAACACAAAGTTGCAGATGAGGA < 41bp 1 0.478603229939033 1 0.922449290752411 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 30 PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50250058 chr16:50250067 synonymous SNV . 0 hm6A_associated_SNPs_82685 0 0 1 3 50250048 50250072 mRNA hsa-miR-422a PAPD5 miRanda miRanda
14034 chr8 6614840 6614840 1 + G T UCEC 6614826 + 6614806 6614846 41 TGACTGCAGGCATGCTTATGACCGATGCTGGAAGGAAGCTG TGACTGCAGGCATGCTTATGACCGATGCTGGAAGTAAGCTG < 41bp 1 0.721754470482897 1 0.941934466362 experiment 0.556491059034206 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 35 AGPAT5 ENSG00000155189 CDS Human protein_coding chr8:6614826 chr8:6614840 nonsynonymous SNV 0.984 3 hm6A_associated_SNPs_82694 0 0 1 1 6614840 6614862 mRNA hsa-miR-199a-5p AGPAT5 miRanda miRanda
14034 chr3 33339171 33339171 1 + G T UCEC 33339166 + 33339146 33339186 41 TTCTTTCCAGGTTTTCTCAAACAATGATGAAGGCCTTATTA TTCTTTCCAGGTTTTCTCAAACAATTATGAAGGCCTTATTA < 41bp 1 0.604572257666248 1 0.341606080532074 experiment 0.790855484667505 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 26 FBXL2 ENSG00000153558 CDS Human protein_coding chr3:33339166 chr3:33339171 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_82701 0 0 0 1 33339158 33339179 mRNA hsa-miR-205 FBXL2 miRanda miRanda
14034 chr6 76388641 76388641 1 + G T UCEC 76388631 + 76388611 76388651 41 TTTAAATGATGTTATTATAGACTTTTATTTGAAGTAAGTTA TTTAAATGATGTTATTATAGACTTTTATTTTAAGTAAGTTA < 41bp 1 0.147191450315434 1 0.735916435718536 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76388631 chr6:76388641 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_82716 0 0 0 3 76388631 76388643 mRNA hsa-miR-29a SENP6 miRanda miRanda
14034 chr6 76388641 76388641 1 + G T UCEC 76388631 + 76388611 76388651 41 TTTAAATGATGTTATTATAGACTTTTATTTGAAGTAAGTTA TTTAAATGATGTTATTATAGACTTTTATTTTAAGTAAGTTA < 41bp 1 0.147191450315434 1 0.735916435718536 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76388631 chr6:76388641 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_82716 0 0 0 3 76388630 76388643 mRNA hsa-miR-29b SENP6 miRanda miRanda
14034 chr6 76388641 76388641 1 + G T UCEC 76388631 + 76388611 76388651 41 TTTAAATGATGTTATTATAGACTTTTATTTGAAGTAAGTTA TTTAAATGATGTTATTATAGACTTTTATTTTAAGTAAGTTA < 41bp 1 0.147191450315434 1 0.735916435718536 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 31 SENP6 ENSG00000112701 CDS Human protein_coding chr6:76388631 chr6:76388641 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_82716 0 0 0 3 76388631 76388643 mRNA hsa-miR-29c SENP6 miRanda miRanda
14034 chr22 50637548 50637548 1 + G T UCEC 50637553 + 50637533 50637573 41 TTTTAATTTCAGAGAGAAAAACTGAAGTAAATGTCAAAAAA TTTTAATTTCAGAGATAAAAACTGAAGTAAATGTCAAAAAA < 41bp 1 0.695301042334882 1 0.892190217971802 experiment 0.609397915330237 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 16 TRABD ENSG00000170638 CDS Human protein_coding chr22:50637553 chr22:50637548 nonsynonymous SNV 0.457 1 hm6A_associated_SNPs_82722 0 0 1 1 50637538 50637559 mRNA hsa-miR-223 TRABD miRanda miRanda
14034 chr8 98731285 98731285 1 + A C UCEC 98731278 + 98731258 98731298 41 AGGTTATTTTTCTCTATAGGACACAGAAGAATTAGAAAAAG AGGTTATTTTTCTCTATAGGACACAGACGAATTAGAAAAAG < 41bp 1 0.528598918565892 1 0.00167280435562134 experiment 0.942802162868215 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 28 MTDH ENSG00000147649 CDS Human protein_coding chr8:98731278 chr8:98731285 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_82727 0 0 1 1 98731283 98731304 mRNA hsa-miR-216b MTDH miRanda miRanda
14034 chr7 65751692 65751692 1 + G A UCEC 65751686 + 65751666 65751706 41 TGATCCCAAAATTATTGAAAACACTCGAAGGGTAAGTGAGA TGATCCCAAAATTATTGAAAACACTCAAAGGGTAAGTGAGA < 41bp 1 0.274441869366239 1 0.0621983110904694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 TPST1 ENSG00000169902 CDS Human protein_coding chr7:65751686 chr7:65751692 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_82733 0 0 1 3 65751688 65751696 mRNA hsa-miR-204 TPST1 miRanda miRanda
14034 chr7 65751692 65751692 1 + G A UCEC 65751686 + 65751666 65751706 41 TGATCCCAAAATTATTGAAAACACTCGAAGGGTAAGTGAGA TGATCCCAAAATTATTGAAAACACTCAAAGGGTAAGTGAGA < 41bp 1 0.274441869366239 1 0.0621983110904694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 TPST1 ENSG00000169902 CDS Human protein_coding chr7:65751686 chr7:65751692 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_82733 0 0 1 3 65751688 65751696 mRNA hsa-miR-211 TPST1 miRanda miRanda
14034 chr7 65751692 65751692 1 + G A UCEC 65751686 + 65751666 65751706 41 TGATCCCAAAATTATTGAAAACACTCGAAGGGTAAGTGAGA TGATCCCAAAATTATTGAAAACACTCAAAGGGTAAGTGAGA < 41bp 1 0.274441869366239 1 0.0621983110904694 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 27 TPST1 ENSG00000169902 CDS Human protein_coding chr7:65751686 chr7:65751692 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_82733 0 0 1 3 65751671 65751693 mRNA hsa-miR-122 TPST1 miRanda miRanda
14034 chr3 42662920 42662920 1 + G T UCEC 42662940 + 42662920 42662960 41 GATGAAAACTTTATTCTCAAACATGACAGAGCGTTCCTTTT TATGAAAACTTTATTCTCAAACATGACAGAGCGTTCCTTTT < 41bp 1 0.722641317815537 1 0.367206394672394 experiment 0.554717364368927 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 1 NKTR ENSG00000114857 splicing Human protein_coding chr3:42662940 chr3:42662920 . 1.000 0 hm6A_associated_SNPs_82737 0 0 1 1 42662915 42662935 mRNA hsa-miR-340 NKTR miRanda miRanda
14034 chr15 49917420 49917420 1 + T A UCEC 49917428 + 49917408 49917448 41 ATAGTTCAAAATTTGTGGAAACAAAACAGTCACAAACTACT ATAGTTCAAAATATGTGGAAACAAAACAGTCACAAACTACT < 41bp 1 0.720959206044821 1 0.873321890830994 experiment 0.558081587910357 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917428 chr15:49917420 nonsynonymous SNV 0.980 0 hm6A_associated_SNPs_82790 0 0 0 2 49917420 49917441 mRNA hsa-miR-134 DTWD1 miRanda miRanda
14034 chr15 49917420 49917420 1 + T A UCEC 49917428 + 49917408 49917448 41 ATAGTTCAAAATTTGTGGAAACAAAACAGTCACAAACTACT ATAGTTCAAAATATGTGGAAACAAAACAGTCACAAACTACT < 41bp 1 0.720959206044821 1 0.873321890830994 experiment 0.558081587910357 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917428 chr15:49917420 nonsynonymous SNV 0.980 0 hm6A_associated_SNPs_82790 0 0 0 2 49917417 49917443 mRNA hsa-miR-758 DTWD1 miRanda miRanda
14034 chr11 65269425 65269425 1 + A C UCEC 65269411 + 65269391 65269431 41 TAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAA TAGTTTATGATTGCAGATAAACTCATGCCAGAGACCTTAAA < 41bp 1 0.154955862625418 1 0.86639404296875 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout|32341503;GSE131316;m6A-Label-seq;HEK293T;Control 35 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269411 chr11:65269425 . . 0 hm6A_associated_SNPs_82826 0 0 1 1 65269418 65269438 lncRNA hsa-miR-499a-5p MALAT1 miRanda starBase2
14034 chr1 27622852 27622852 1 + G A UCEC 27622835 + 27622815 27622855 41 AGGTCTATTTGTTTGACTTGACTTACAAGCAGCGGCCGTAC AGGTCTATTTGTTTGACTTGACTTACAAGCAGCGGCCATAC < 41bp 1 0.23918201143326 1 0.0385193526744843 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27622835 chr1:27622852 synonymous SNV . 0 hm6A_associated_SNPs_82832 0 0 1 1 27622850 27622870 mRNA hsa-miR-31 WDTC1 miRanda miRanda
14034 chrX 149828889 149828889 1 + T A UCEC 149828870 + 149828850 149828890 41 ACAGCTTTTGAATTCAATGAACAATTTTTGATTATAATTTT ACAGCTTTTGAATTCAATGAACAATTTTTGATTATAATTAT < 41bp 1 0.561491359003726 1 0.131901204586029 experiment 0.877017281992548 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 40 MTM1 ENSG00000171100 CDS Human protein_coding chrX:149828870 chrX:149828889 nonsynonymous SNV 0.992 3 hm6A_associated_SNPs_82857 0 0 0 1 149828883 149828905 mRNA hsa-miR-361-5p MTM1 miRanda miRanda
14034 chr17 30530961 30530961 1 + T C UCEC 30530974 + 30530954 30530994 41 AACACTGTTTATGTATATGGACAAGAGAAATACTTGTTGGT AACACTGCTTATGTATATGGACAAGAGAAATACTTGTTGGT < 41bp 1 0.734077350791133 1 0.920845866203308 experiment 0.531845298417735 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30530974 chr17:30530961 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_82870 0 0 1 2 30530949 30530971 mRNA hsa-miR-374a RHOT1 miRanda miRanda
14034 chr17 30530961 30530961 1 + T C UCEC 30530974 + 30530954 30530994 41 AACACTGTTTATGTATATGGACAAGAGAAATACTTGTTGGT AACACTGCTTATGTATATGGACAAGAGAAATACTTGTTGGT < 41bp 1 0.734077350791133 1 0.920845866203308 experiment 0.531845298417735 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30530974 chr17:30530961 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_82870 0 0 1 2 30530949 30530971 mRNA hsa-miR-374b RHOT1 miRanda miRanda
14034 chr3 186503752 186503752 1 + T C UCEC 186503764 + 186503744 186503784 41 GTTCGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA GTTCGAAACGAAATGCAAAAACTGCAGGCTGAAGCACCACA < 41bp 1 0.358230866472953 1 0.951899409294128 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 9 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503764 chr3:186503752 stoploss . 0 hm6A_associated_SNPs_82892 0 0 1 1 186503745 186503765 mRNA hsa-miR-129-5p EIF4A2 miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATAGCAT < 41bp 1 0.282862559889447 1 0.869439005851746 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82895 0 0 1 5 113260548 113260569 mRNA hsa-miR-190 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATAGCAT < 41bp 1 0.282862559889447 1 0.869439005851746 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82895 0 0 1 5 113260552 113260573 mRNA hsa-miR-433 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATAGCAT < 41bp 1 0.282862559889447 1 0.869439005851746 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82895 0 0 1 5 113260556 113260577 mRNA hsa-miR-505 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATAGCAT < 41bp 1 0.282862559889447 1 0.869439005851746 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82895 0 0 1 5 113260554 113260576 mRNA hsa-miR-421 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260550 + 113260530 113260570 41 ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCAT ATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATAGCAT < 41bp 1 0.282862559889447 1 0.869439005851746 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 38 TTL ENSG00000114999 CDS Human protein_coding chr2:113260550 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82895 0 0 1 5 113260549 113260569 mRNA hsa-miR-190b TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA GCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA < 41bp 1 0.666750694040713 1 0.873706340789795 experiment 0.666498611918574 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82896 0 0 1 5 113260548 113260569 mRNA hsa-miR-190 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA GCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA < 41bp 1 0.666750694040713 1 0.873706340789795 experiment 0.666498611918574 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82896 0 0 1 5 113260552 113260573 mRNA hsa-miR-433 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA GCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA < 41bp 1 0.666750694040713 1 0.873706340789795 experiment 0.666498611918574 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82896 0 0 1 5 113260556 113260577 mRNA hsa-miR-505 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA GCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA < 41bp 1 0.666750694040713 1 0.873706340789795 experiment 0.666498611918574 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82896 0 0 1 5 113260554 113260576 mRNA hsa-miR-421 TTL miRanda miRanda
14034 chr2 113260567 113260567 1 + T G UCEC 113260587 + 113260567 113260607 41 TCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA GCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCA < 41bp 1 0.666750694040713 1 0.873706340789795 experiment 0.666498611918574 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 1 TTL ENSG00000114999 CDS Human protein_coding chr2:113260587 chr2:113260567 stopgain 0.999 1 hm6A_associated_SNPs_82896 0 0 1 5 113260549 113260569 mRNA hsa-miR-190b TTL miRanda miRanda
14034 chr3 49051142 49051142 1 + G A UCEC 49051153 + 49051133 49051173 41 CAGCTTCATGCAGCCTGATGACCTGGAGCCTGGCAGTGAGG CAGCTTCATACAGCCTGATGACCTGGAGCCTGGCAGTGAGG < 41bp 1 0.744558959766834 1 0.960136771202087 experiment 0.510882080466332 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 10 WDR6 ENSG00000178252 CDS Human protein_coding chr3:49051153 chr3:49051142 nonsynonymous SNV 0.005 0 hm6A_associated_SNPs_82905 0 0 1 1 49051141 49051163 mRNA hsa-miR-24 WDR6 miRanda miRanda
14034 chr1 171765880 171765880 1 + C T UCEC 171765896 + 171765876 171765916 41 AAGACGGTGAAAATTGTGTGACTGCTTAGGCCAAGCAGCCC AAGATGGTGAAAATTGTGTGACTGCTTAGGCCAAGCAGCCC < 41bp 1 0.798041036302757 1 0.935791373252869 experiment 0.403917927394485 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765896 chr1:171765880 nonsynonymous SNV 0.685 0 hm6A_associated_SNPs_82924 0 0 1 2 171765880 171765902 mRNA hsa-miR-16 METTL13 miRanda miRanda
14034 chr1 171765880 171765880 1 + C T UCEC 171765896 + 171765876 171765916 41 AAGACGGTGAAAATTGTGTGACTGCTTAGGCCAAGCAGCCC AAGATGGTGAAAATTGTGTGACTGCTTAGGCCAAGCAGCCC < 41bp 1 0.798041036302757 1 0.935791373252869 experiment 0.403917927394485 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 5 METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765896 chr1:171765880 nonsynonymous SNV 0.685 0 hm6A_associated_SNPs_82924 0 0 1 2 171765875 171765897 mRNA hsa-miR-377 METTL13 miRanda miRanda
14034 chr14 72926368 72926368 1 + G T UCEC 72926380 + 72926360 72926400 41 GAACTGCTGGGAACCTGAAAACACTGACTATGGTGAGAACT GAACTGCTTGGAACCTGAAAACACTGACTATGGTGAGAACT < 41bp 1 0.139069206108612 1 0.594774425029755 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 RGS6 ENSG00000182732 CDS Human protein_coding chr14:72926380 chr14:72926368 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_82932 0 0 0 1 72926366 72926388 mRNA hsa-miR-223 RGS6 miRanda miRanda
14034 chr7 107217866 107217866 1 + G T UCEC 107217861 + 107217841 107217881 41 TGGGTTGACATTGCTCTTGAACTCGGGACTCCTTACATGTG TGGGTTGACATTGCTCTTGAACTCGTGACTCCTTACATGTG < 41bp 1 0.681522920594019 1 0.894809782505035 experiment 0.636954158811961 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 26 DUS4L ENSG00000105865 CDS Human protein_coding chr7:107217861 chr7:107217866 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_82970 0 0 1 1 107217864 107217886 mRNA hsa-miR-494 DUS4L miRanda miRanda
14034 chr14 105920599 105920599 1 + C A UCEC 105920609 + 105920589 105920629 41 AGGAGAGATTCGAGTAGGAAACCGGTACCAGGCAGACATCA AGGAGAGATTAGAGTAGGAAACCGGTACCAGGCAGACATCA < 41bp 1 0.083095749339283 1 0.490289360284805 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 11 MTA1 ENSG00000182979 CDS Human protein_coding chr14:105920609 chr14:105920599 synonymous SNV . 0 hm6A_associated_SNPs_82971 0 0 1 1 105920578 105920599 mRNA hsa-miR-216b MTA1 miRanda miRanda
14034 chr2 160604463 160604463 1 + C A UCEC 160604451 + 160604431 160604471 41 GACCATACTAAGTTCTAGGGACTCCAGAAATTCTTTAAGAT GACCATACTAAGTTCTAGGGACTCCAGAAATTATTTAAGAT < 41bp 1 0.767885097367327 1 0.965570569038391 experiment 0.464229805265346 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 33 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604451 chr2:160604463 nonsynonymous SNV 0.914 2 hm6A_associated_SNPs_82977 0 0 1 1 160604445 160604467 mRNA hsa-miR-186 MARCH7 miRanda miRanda
14034 chr11 65271286 65271286 1 + T G UCEC 65271280 + 65271260 65271300 41 GTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAA GTAACTTTAAGGCAGGAAAGACAAATGTTATTCTTCATAAA < 41bp 1 0.174089797775828 1 0.0956544280052185 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 27 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271280 chr11:65271286 . . 0 hm6A_associated_SNPs_83005 0 0 1 1 65271270 65271291 lncRNA hsa-miR-3163 MALAT1 miRanda starBase2
14034 chrX 74520752 74520752 1 + G A UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGGAATTCAACCCAGTGT < 41bp 1 0.749597546527462 1 0.0707027912139893 experiment 0.500804906945075 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520752 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_83044 0 0 1 4 74520746 74520767 mRNA hsa-miR-141 UPRT miRanda miRanda
14034 chrX 74520752 74520752 1 + G A UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGGAATTCAACCCAGTGT < 41bp 1 0.749597546527462 1 0.0707027912139893 experiment 0.500804906945075 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520752 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_83044 0 0 1 4 74520730 74520752 mRNA hsa-miR-145 UPRT miRanda miRanda
14034 chrX 74520752 74520752 1 + G A UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGGAATTCAACCCAGTGT < 41bp 1 0.749597546527462 1 0.0707027912139893 experiment 0.500804906945075 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520752 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_83044 0 0 1 4 74520747 74520767 mRNA hsa-miR-200a UPRT miRanda miRanda
14034 chrX 74520752 74520752 1 + G A UCEC 74520745 + 74520725 74520765 41 GCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGT GCTGTAAAGGTTCTTATAGAACATGGAATTCAACCCAGTGT < 41bp 1 0.749597546527462 1 0.0707027912139893 experiment 0.500804906945075 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 28 UPRT ENSG00000094841 CDS Human protein_coding chrX:74520745 chrX:74520752 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_83044 0 0 1 4 74520743 74520767 mRNA hsa-miR-490-3p UPRT miRanda miRanda
14034 chr17 29096990 29096990 1 + T G UCEC 29096997 + 29096977 29097017 41 AAAACAGGTAATGTTGATGAACAAGCGAGGCTCCCACAATG AAAACAGGTAATGGTGATGAACAAGCGAGGCTCCCACAATG < 41bp 1 0.407332805367252 1 0.738950729370117 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 14 SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29096997 chr17:29096990 . . 0 hm6A_associated_SNPs_83045 0 0 1 1 29096973 29096994 mRNA hsa-miR-23b SUZ12P miRanda miRanda
14034 chr17 42744067 42744067 1 + A G UCEC 42744051 + 42744031 42744071 41 AGACAAATGATACAGCTAAGACAACATTCCAAGAATATCCA AGACAAATGATACAGCTAAGACAACATTCCAAGAATGTCCA < 41bp 1 0.763777663363895 1 0.911783576011658 experiment 0.47244467327221 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 37 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744051 chr17:42744067 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_83144 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr17 42744067 42744067 1 + A G UCEC 42744082 + 42744062 42744102 41 AGAATATCCACTTATCAAAAACTGTTTTACACCCCAAACTG AGAATGTCCACTTATCAAAAACTGTTTTACACCCCAAACTG < 41bp 1 0.605788530621572 1 0.93781590461731 experiment 0.788422938756856 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 6 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744082 chr17:42744067 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_83145 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr15 65847245 65847245 1 + G T UCEC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAATGAGACAA < 41bp 1 0.634261486773918 1 0.0578646659851074 experiment 0.731477026452163 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847245 stopgain 1.000 1 hm6A_associated_SNPs_83150 0 0 1 4 65847228 65847250 mRNA hsa-miR-204 PTPLAD1 miRanda miRanda
14034 chr15 65847245 65847245 1 + G T UCEC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAATGAGACAA < 41bp 1 0.634261486773918 1 0.0578646659851074 experiment 0.731477026452163 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847245 stopgain 1.000 1 hm6A_associated_SNPs_83150 0 0 1 4 65847227 65847250 mRNA hsa-miR-211 PTPLAD1 miRanda miRanda
14034 chr15 65847245 65847245 1 + G T UCEC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAATGAGACAA < 41bp 1 0.634261486773918 1 0.0578646659851074 experiment 0.731477026452163 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847245 stopgain 1.000 1 hm6A_associated_SNPs_83150 0 0 1 4 65847242 65847262 mRNA hsa-miR-376a PTPLAD1 miRanda miRanda
14034 chr15 65847245 65847245 1 + G T UCEC 65847232 + 65847212 65847252 41 TCTTTCTTTATAGCTCAAGGACATGGTGCCAAAGGAGACAA TCTTTCTTTATAGCTCAAGGACATGGTGCCAAATGAGACAA < 41bp 1 0.634261486773918 1 0.0578646659851074 experiment 0.731477026452163 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 34 HACD3 ENSG00000074696 CDS Human protein_coding chr15:65847232 chr15:65847245 stopgain 1.000 1 hm6A_associated_SNPs_83150 0 0 1 4 65847241 65847262 mRNA hsa-miR-376b PTPLAD1 miRanda miRanda
14034 chr1 233802631 233802631 1 + T G UCEC 233802611 + 233802591 233802631 41 CTTCTCAGTCCTGGAGGATGACTGGAACTTCCTGGAATCCT CTTCTCAGTCCTGGAGGATGACTGGAACTTCCTGGAATCCG < 41bp 1 0.599015168182803 1 0.675325453281403 experiment 0.801969663634394 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802611 chr1:233802631 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_83168 0 0 1 1 233802623 233802644 mRNA hsa-miR-495 KCNK1 miRanda miRanda
14034 chr1 233802631 233802631 1 + T G UCEC 233802617 + 233802597 233802637 41 AGTCCTGGAGGATGACTGGAACTTCCTGGAATCCTTTTATT AGTCCTGGAGGATGACTGGAACTTCCTGGAATCCGTTTATT < 41bp 1 0.592335587198234 1 0.756888270378113 experiment 0.815328825603532 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 35 KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802617 chr1:233802631 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_83169 0 0 1 1 233802623 233802644 mRNA hsa-miR-495 KCNK1 miRanda miRanda
14034 chr19 2271944 2271944 1 + G A UCEC 2271950 + 2271930 2271970 41 GCTGCCCGAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG GCTGCCCGAGGGGAACAAGGACAGGTGAGGGGCAAGGACAG < 41bp 1 0.29237078047142 1 0.814412772655487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271950 chr19:2271944 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_83181 0 0 1 4 2271937 2271953 mRNA hsa-miR-320a OAZ1 miRanda miRanda
14034 chr19 2271944 2271944 1 + G A UCEC 2271950 + 2271930 2271970 41 GCTGCCCGAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG GCTGCCCGAGGGGAACAAGGACAGGTGAGGGGCAAGGACAG < 41bp 1 0.29237078047142 1 0.814412772655487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271950 chr19:2271944 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_83181 0 0 1 4 2271937 2271953 mRNA hsa-miR-320b OAZ1 miRanda miRanda
14034 chr19 2271944 2271944 1 + G A UCEC 2271950 + 2271930 2271970 41 GCTGCCCGAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG GCTGCCCGAGGGGAACAAGGACAGGTGAGGGGCAAGGACAG < 41bp 1 0.29237078047142 1 0.814412772655487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271950 chr19:2271944 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_83181 0 0 1 4 2271939 2271953 mRNA hsa-miR-320c OAZ1 miRanda miRanda
14034 chr19 2271944 2271944 1 + G A UCEC 2271950 + 2271930 2271970 41 GCTGCCCGAGGGGAGCAAGGACAGGTGAGGGGCAAGGACAG GCTGCCCGAGGGGAACAAGGACAGGTGAGGGGCAAGGACAG < 41bp 1 0.29237078047142 1 0.814412772655487 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 15 OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271950 chr19:2271944 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_83181 0 0 1 4 2271940 2271953 mRNA hsa-miR-320d OAZ1 miRanda miRanda
14034 chr4 155491688 155491688 1 + G A UCEC 155491676 + 155491656 155491696 41 GGCAGATACTACTGGGGTGGACAGTACACCTGGGACATGGC GGCAGATACTACTGGGGTGGACAGTACACCTGAGACATGGC < 41bp 1 0.770789111514452 1 0.955142855644226 experiment 0.458421776971095 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 33 FGB ENSG00000171564 CDS Human protein_coding chr4:155491676 chr4:155491688 stopgain 0.966 1 hm6A_associated_SNPs_83190 0 0 1 1 155491666 155491689 mRNA hsa-miR-199a-5p FGB miRanda miRanda
14034 chr4 155491688 155491688 1 + G A UCEC 155491690 + 155491670 155491710 41 GGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAG GGGTGGACAGTACACCTGAGACATGGCAAAGCATGGCACAG < 41bp 1 0.712013602814201 1 0.920178532600403 experiment 0.575972794371598 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control 19 FGB ENSG00000171564 CDS Human protein_coding chr4:155491690 chr4:155491688 stopgain 0.966 1 hm6A_associated_SNPs_83191 0 0 1 1 155491666 155491689 mRNA hsa-miR-199a-5p FGB miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569931 35569950 mRNA hsa-let-7a ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569931 35569950 mRNA hsa-let-7b ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569927 35569950 mRNA hsa-let-7c ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569929 35569950 mRNA hsa-let-7d ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569931 35569950 mRNA hsa-let-7e ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569929 35569950 mRNA hsa-let-7f ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569928 35569950 mRNA hsa-miR-98 ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569928 35569949 mRNA hsa-miR-196a ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569939 35569959 mRNA hsa-miR-129-5p ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569931 35569950 mRNA hsa-let-7g ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569928 35569950 mRNA hsa-let-7i ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569925 35569947 mRNA hsa-miR-142-3p ZMYM1 miRanda miRanda
14034 chr1 35569946 35569946 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTATCTCTTGCAAAACTT < 41bp 1 0.632732224882715 1 0.193702548742294 experiment 0.734535550234569 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569946 nonsynonymous SNV 0.010 0 hm6A_associated_SNPs_83206 0 0 1 13 35569928 35569949 mRNA hsa-miR-196b ZMYM1 miRanda miRanda
14034 chr1 2105437 2105437 1 + G T UCEC 2105432 + 2105412 2105452 41 CACCGACAACCCGGACATGAACACAGAGGACTACCTTTTCC CACCGACAACCCGGACATGAACACATAGGACTACCTTTTCC < 41bp 1 0.242636960236255 1 0.974135160446167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2105432 chr1:2105437 stopgain 0.994 1 hm6A_associated_SNPs_83213 0 0 1 2 2105428 2105448 mRNA hsa-miR-196a PRKCZ miRanda miRanda
14034 chr1 2105437 2105437 1 + G T UCEC 2105432 + 2105412 2105452 41 CACCGACAACCCGGACATGAACACAGAGGACTACCTTTTCC CACCGACAACCCGGACATGAACACATAGGACTACCTTTTCC < 41bp 1 0.242636960236255 1 0.974135160446167 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 26 PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2105432 chr1:2105437 stopgain 0.994 1 hm6A_associated_SNPs_83213 0 0 1 2 2105428 2105448 mRNA hsa-miR-196b PRKCZ miRanda miRanda
14034 chr1 2105437 2105437 1 + G T UCEC 2105441 + 2105421 2105461 41 CCCGGACATGAACACAGAGGACTACCTTTTCCAAGGTGCGT CCCGGACATGAACACATAGGACTACCTTTTCCAAGGTGCGT < 41bp 1 0.114310703495143 1 0.987919390201569 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2105441 chr1:2105437 stopgain 0.994 1 hm6A_associated_SNPs_83214 0 0 1 2 2105428 2105448 mRNA hsa-miR-196a PRKCZ miRanda miRanda
14034 chr1 2105437 2105437 1 + G T UCEC 2105441 + 2105421 2105461 41 CCCGGACATGAACACAGAGGACTACCTTTTCCAAGGTGCGT CCCGGACATGAACACATAGGACTACCTTTTCCAAGGTGCGT < 41bp 1 0.114310703495143 1 0.987919390201569 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2105441 chr1:2105437 stopgain 0.994 1 hm6A_associated_SNPs_83214 0 0 1 2 2105428 2105448 mRNA hsa-miR-196b PRKCZ miRanda miRanda
14034 chr11 65268433 65268433 1 + G A UCEC 65268438 + 65268418 65268458 41 TCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAAT TCTGAAGCTTTTGAGAGCAGACTGCCAAGTCCTGGAGAAAT < 41bp 1 0.144305288195089 1 0.960826814174652 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 16 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268438 chr11:65268433 . . 0 hm6A_associated_SNPs_83215 0 0 1 1 65268418 65268440 lncRNA hsa-miR-346 MALAT1 miRanda starBase2
14034 chr12 12790643 12790643 1 + A G UCEC 12790627 + 12790607 12790647 41 GGCATACCAAGGCTGGGAAGACAGATGCTAATAGCAATTCC GGCATACCAAGGCTGGGAAGACAGATGCTAATAGCAGTTCC < 41bp 1 0.408218010188031 1 0.286202073097229 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 37 CREBL2 ENSG00000111269 CDS Human protein_coding chr12:12790627 chr12:12790643 nonsynonymous SNV 0.980 0 hm6A_associated_SNPs_83251 0 0 1 1 12790638 12790648 mRNA hsa-miR-216a CREBL2 miRanda miRanda
14034 chr6 4053102 4053102 1 + A G UCEC 4053097 + 4053077 4053117 41 ACATGCAGATATCAAGCCAGACAATATCCTGGTAAGTCAAA ACATGCAGATATCAAGCCAGACAATGTCCTGGTAAGTCAAA < 41bp 1 0.584756476198273 1 0.756120085716248 experiment 0.830487047603454 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 26 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4053097 chr6:4053102 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_83254 0 0 1 1 4053085 4053105 mRNA hsa-miR-190b PRPF4B miRanda miRanda
14034 chr6 4044125 4044125 1 + C T UCEC 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT GCCCCCAGAGCAGTACGAGAACATGATCACCATCTCCAGAT < 41bp 1 0.775072823668464 1 0.930398762226105 experiment 0.449854352663071 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 24 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044125 stopgain 0.979 1 hm6A_associated_SNPs_83258 0 0 1 1 4044105 4044127 mRNA hsa-miR-187 PRPF4B miRanda miRanda
14034 chr1 211462694 211462694 1 + A G UCEC 211462710 + 211462690 211462730 41 CACCATCCTGAGGCAACTGGACATGGAGTTGATCTCTCTAA CACCGTCCTGAGGCAACTGGACATGGAGTTGATCTCTCTAA < 41bp 1 0.596907397848359 1 0.814491510391235 experiment 0.806185204303283 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 5 RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211462710 chr1:211462694 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_83261 0 0 1 1 211462689 211462711 mRNA hsa-miR-145 RCOR3 miRanda miRanda
14034 chr2 30381561 30381561 1 + G A UCEC 30381567 + 30381547 30381587 41 TCGAGATGTGAGCTGCAAAAACTGCAATAGCAAACTGGGAT TCGAGATGTGAGCTACAAAAACTGCAATAGCAAACTGGGAT < 41bp 1 0.769838589105418 1 0.925735592842102 experiment 0.460322821789164 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 YPEL5 ENSG00000119801 CDS Human protein_coding chr2:30381567 chr2:30381561 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_83273 0 0 1 3 30381558 30381579 mRNA hsa-miR-33a YPEL5 miRanda miRanda
14034 chr2 30381561 30381561 1 + G A UCEC 30381567 + 30381547 30381587 41 TCGAGATGTGAGCTGCAAAAACTGCAATAGCAAACTGGGAT TCGAGATGTGAGCTACAAAAACTGCAATAGCAAACTGGGAT < 41bp 1 0.769838589105418 1 0.925735592842102 experiment 0.460322821789164 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 YPEL5 ENSG00000119801 CDS Human protein_coding chr2:30381567 chr2:30381561 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_83273 0 0 1 3 30381547 30381568 mRNA hsa-miR-129-5p YPEL5 miRanda miRanda
14034 chr2 30381561 30381561 1 + G A UCEC 30381567 + 30381547 30381587 41 TCGAGATGTGAGCTGCAAAAACTGCAATAGCAAACTGGGAT TCGAGATGTGAGCTACAAAAACTGCAATAGCAAACTGGGAT < 41bp 1 0.769838589105418 1 0.925735592842102 experiment 0.460322821789164 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 15 YPEL5 ENSG00000119801 CDS Human protein_coding chr2:30381567 chr2:30381561 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_83273 0 0 1 3 30381559 30381579 mRNA hsa-miR-33b YPEL5 miRanda miRanda
14034 chr4 178274604 178274604 1 + T G UCEC 178274599 + 178274579 178274619 41 GAACTACAACTCTTGTCTTGACTGATTTTAGCAATAAATCC GAACTACAACTCTTGTCTTGACTGAGTTTAGCAATAAATCC < 41bp 1 0.633569297264909 1 0.987613558769226 experiment 0.732861405470183 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274599 chr4:178274604 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_83309 0 0 1 2 178274594 178274615 mRNA hsa-miR-137 NEIL3 miRanda miRanda
14034 chr4 178274604 178274604 1 + T G UCEC 178274599 + 178274579 178274619 41 GAACTACAACTCTTGTCTTGACTGATTTTAGCAATAAATCC GAACTACAACTCTTGTCTTGACTGAGTTTAGCAATAAATCC < 41bp 1 0.633569297264909 1 0.987613558769226 experiment 0.732861405470183 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274599 chr4:178274604 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_83309 0 0 1 2 178274598 178274620 mRNA hsa-miR-876-5p NEIL3 miRanda miRanda
14034 chr11 134241362 134241362 1 + G A UCEC 134241349 + 134241329 134241369 41 AGTATCCATAGGATTCTTGGACTACAAGACAACGAAGATTG AGTATCCATAGGATTCTTGGACTACAAGACAACAAAGATTG < 41bp 1 0.235260115135819 1 0.847699046134949 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 34 GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134241349 chr11:134241362 synonymous SNV . 0 hm6A_associated_SNPs_83351 0 0 0 1 134241341 134241363 mRNA hsa-miR-187 GLB1L2 miRanda miRanda
14034 chr7 107215674 107215674 1 + A C UCEC 107215692 + 107215672 107215712 41 CAAGCCAGAGCTTGTTCAAGACATGGTGAAACAAGTAAGAA CACGCCAGAGCTTGTTCAAGACATGGTGAAACAAGTAAGAA < 41bp 1 0.795559807909689 1 0.24699854850769 experiment 0.408880384180622 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 3 DUS4L ENSG00000105865 CDS Human protein_coding chr7:107215692 chr7:107215674 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_83356 0 0 0 1 107215674 107215694 mRNA hsa-miR-431 DUS4L miRanda miRanda
14034 chr3 158541283 158541283 1 + C T UCEC 158541288 + 158541268 158541308 41 GTGGCATTTGTAGTTCCTGAACATCAGCTGGGAACTGCATA GTGGCATTTGTAGTTTCTGAACATCAGCTGGGAACTGCATA < 41bp 1 0.615061949194141 1 0.109591454267502 experiment 0.769876101611718 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 16 MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158541288 chr3:158541283 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_83387 0 0 1 1 158541268 158541287 mRNA hsa-miR-873 MFSD1 miRanda miRanda
14034 chr2 170930023 170930023 1 + C T UCEC 170930003 + 170929983 170930023 41 CCAACGTTTTACCAAACAGAACATCCATTCATCAGTGCCTC CCAACGTTTTACCAAACAGAACATCCATTCATCAGTGCCTT < 41bp 1 0.462570767814996 1 0.38940292596817 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170930003 chr2:170930023 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_83404 0 0 0 2 170930021 170930042 mRNA hsa-miR-193a-3p UBR3 miRanda miRanda
14034 chr2 170930023 170930023 1 + C T UCEC 170930003 + 170929983 170930023 41 CCAACGTTTTACCAAACAGAACATCCATTCATCAGTGCCTC CCAACGTTTTACCAAACAGAACATCCATTCATCAGTGCCTT < 41bp 1 0.462570767814996 1 0.38940292596817 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 41 UBR3 ENSG00000144357 CDS Human protein_coding chr2:170930003 chr2:170930023 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_83404 0 0 0 2 170930021 170930042 mRNA hsa-miR-193b UBR3 miRanda miRanda
14034 chr6 4044116 4044116 1 + A G UCEC 4044122 + 4044102 4044142 41 GCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGAT GCCCCCAGAGCAGTGCGAGAACACGATCACCATCTCCAGAT < 41bp 1 0.701499633901818 1 0.841200292110443 experiment 0.597000732196363 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 15 PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4044122 chr6:4044116 nonsynonymous SNV 0.929 1 hm6A_associated_SNPs_83457 0 0 1 1 4044105 4044127 mRNA hsa-miR-187 PRPF4B miRanda miRanda
14034 chr6 161513108 161513108 1 + A C UCEC 161513097 + 161513077 161513117 41 GTTTAGACAGAAGATAGGAGACAAATATATAAGCTTTGCCC GTTTAGACAGAAGATAGGAGACAAATATATACGCTTTGCCC < 41bp 1 0.671753834868563 1 0.251903831958771 experiment 0.656492330262874 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161513097 chr6:161513108 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_83593 0 0 1 2 161513094 161513112 mRNA hsa-miR-21 MAP3K4 miRanda miRanda
14034 chr6 161513108 161513108 1 + A C UCEC 161513097 + 161513077 161513117 41 GTTTAGACAGAAGATAGGAGACAAATATATAAGCTTTGCCC GTTTAGACAGAAGATAGGAGACAAATATATACGCTTTGCCC < 41bp 1 0.671753834868563 1 0.251903831958771 experiment 0.656492330262874 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 32 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161513097 chr6:161513108 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_83593 0 0 1 2 161513091 161513112 mRNA hsa-miR-590-5p MAP3K4 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569931 35569950 mRNA hsa-let-7a ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569931 35569950 mRNA hsa-let-7b ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569927 35569950 mRNA hsa-let-7c ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569929 35569950 mRNA hsa-let-7d ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569931 35569950 mRNA hsa-let-7e ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569929 35569950 mRNA hsa-let-7f ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569928 35569950 mRNA hsa-miR-98 ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569928 35569949 mRNA hsa-miR-196a ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569939 35569959 mRNA hsa-miR-129-5p ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569931 35569950 mRNA hsa-let-7g ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569928 35569950 mRNA hsa-let-7i ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569925 35569947 mRNA hsa-miR-142-3p ZMYM1 miRanda miRanda
14034 chr1 35569947 35569947 1 + C T UCEC 35569940 + 35569920 35569960 41 GATTAGTGTCCAGCTGGAAGACACTACCTCTTGCAAAACTT GATTAGTGTCCAGCTGGAAGACACTACTTCTTGCAAAACTT < 41bp 1 0.602963277214049 1 0.310038030147552 experiment 0.794073445571903 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 28 ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569940 chr1:35569947 synonymous SNV . 0 hm6A_associated_SNPs_83612 0 0 1 13 35569928 35569949 mRNA hsa-miR-196b ZMYM1 miRanda miRanda
14034 chr14 105927272 105927272 1 + G A UCEC 105927274 + 105927254 105927294 41 ATATGGGAAGGATTTCACGGACATTCAGCAAGATTTTGTGA ATATGGGAAGGATTTCACAGACATTCAGCAAGATTTTGTGA < 41bp 1 0.490536857741529 1 0.967581510543823 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 MTA1 ENSG00000182979 CDS Human protein_coding chr14:105927274 chr14:105927272 synonymous SNV . 0 hm6A_associated_SNPs_83622 0 0 1 1 105927272 105927290 mRNA hsa-miR-539 MTA1 miRanda miRanda
14034 chr8 27634267 27634267 1 + T C UCEC 27634258 + 27634238 27634278 41 AAAAACCACAGAAGAGTTTAACTGCTAAGTATCAACCAAAG AAAAACCACAGAAGAGTTTAACTGCTAAGCATCAACCAAAG < 41bp 1 0.468779286343606 1 0.983922004699707 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 30 ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27634258 chr8:27634267 nonsynonymous SNV 0.991 0 hm6A_associated_SNPs_83628 0 0 1 1 27634254 27634279 mRNA hsa-miR-9 ESCO2 miRanda miRanda
14034 chr5 76331554 76331554 1 + G A UCEC 76331538 + 76331518 76331558 41 ACAGAAAATGTTAAATATAGACAAGTGGACCATTTTGCCTC ACAGAAAATGTTAAATATAGACAAGTGGACCATTTTACCTC < 41bp 1 0.662982840540681 1 0.981462478637695 experiment 0.674034318918638 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 37 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76331538 chr5:76331554 nonsynonymous SNV 0.643 0 hm6A_associated_SNPs_83643 0 0 1 1 76331553 76331568 mRNA hsa-miR-149 AGGF1 miRanda miRanda
14034 chr16 30007658 30007658 1 + G T UCEC 30007660 + 30007640 30007680 41 GCCGGCGGACGGCGAAGTGGACTACAAAAAAAAATACCGGA GCCGGCGGACGGCGAAGTTGACTACAAAAAAAAATACCGGA < 41bp 1 0.363529362987347 1 0.994162082672119 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|25491922;GSE54921;PA-m6A-seq;HeLa;Control 19 INO80E ENSG00000169592 CDS Human protein_coding chr16:30007660 chr16:30007658 synonymous SNV . 0 hm6A_associated_SNPs_83653 0 0 1 1 30007652 30007670 mRNA hsa-miR-129-5p INO80E miRanda miRanda
14034 chr11 71169507 71169507 1 + G A UCEC 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCAGACACCCTCTTGCACTCGTTTC < 41bp 1 0.448772938794862 1 0.843070328235626 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169507 synonymous SNV . 0 hm6A_associated_SNPs_83723 0 0 1 5 71169503 71169524 mRNA hsa-miR-130a NADSYN1 miRanda miRanda
14034 chr11 71169507 71169507 1 + G A UCEC 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCAGACACCCTCTTGCACTCGTTTC < 41bp 1 0.448772938794862 1 0.843070328235626 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169507 synonymous SNV . 0 hm6A_associated_SNPs_83723 0 0 1 5 71169503 71169524 mRNA hsa-miR-301a NADSYN1 miRanda miRanda
14034 chr11 71169507 71169507 1 + G A UCEC 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCAGACACCCTCTTGCACTCGTTTC < 41bp 1 0.448772938794862 1 0.843070328235626 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169507 synonymous SNV . 0 hm6A_associated_SNPs_83723 0 0 1 5 71169504 71169524 mRNA hsa-miR-130b NADSYN1 miRanda miRanda
14034 chr11 71169507 71169507 1 + G A UCEC 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCAGACACCCTCTTGCACTCGTTTC < 41bp 1 0.448772938794862 1 0.843070328235626 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169507 synonymous SNV . 0 hm6A_associated_SNPs_83723 0 0 1 5 71169502 71169524 mRNA hsa-miR-454 NADSYN1 miRanda miRanda
14034 chr11 71169507 71169507 1 + G A UCEC 71169509 + 71169489 71169529 41 GGATCATTATTACGAGTCGGACACCCTCTTGCACTCGTTTC GGATCATTATTACGAGTCAGACACCCTCTTGCACTCGTTTC < 41bp 1 0.448772938794862 1 0.843070328235626 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 19 NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169509 chr11:71169507 synonymous SNV . 0 hm6A_associated_SNPs_83723 0 0 1 5 71169503 71169524 mRNA hsa-miR-301b NADSYN1 miRanda miRanda
14034 chr17 46683643 46683643 1 + C T UCEC 46683646 + 46683626 46683666 41 TCTTAGGATCTTGCTCCCGGACTCATTCCCTTCCCCACCCC TCTTAGGATCTTGCTCCTGGACTCATTCCCTTCCCCACCCC < 41bp 1 0.114632515207159 1 0.827199280261993 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 18 HOXB-AS3 ENSG00000233101 ncRNA_exonic Human antisense chr17:46683646 chr17:46683643 . . 0 hm6A_associated_SNPs_83757 0 0 1 1 46683643 46683664 mRNA hsa-miR-491-5p LOC404266 miRanda miRanda
14034 chrX 22010747 22010747 1 + G A UCEC 22010759 + 22010739 22010779 41 GCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTG GCACTGTCACTCTATGAAGAACAGCTGGGGCGCCTGTATTG < 41bp 1 0.480107756882764 1 0.538268208503723 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 9 SMS ENSG00000102172 CDS Human protein_coding chrX:22010759 chrX:22010747 synonymous SNV . 0 hm6A_associated_SNPs_83794 1 0 1 2 22010735 22010756 mRNA hsa-miR-376a SMS miRanda miRanda
14034 chrX 22010747 22010747 1 + G A UCEC 22010759 + 22010739 22010779 41 GCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTG GCACTGTCACTCTATGAAGAACAGCTGGGGCGCCTGTATTG < 41bp 1 0.480107756882764 1 0.538268208503723 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 9 SMS ENSG00000102172 CDS Human protein_coding chrX:22010759 chrX:22010747 synonymous SNV . 0 hm6A_associated_SNPs_83794 1 0 1 2 22010734 22010756 mRNA hsa-miR-376b SMS miRanda miRanda
14034 chr18 55833068 55833068 1 + G A UCEC 55833078 + 55833058 55833098 41 AATTGATCTCGCCAAAAAGGACATCTTTGGAGCCAGGTATG AATTGATCTCACCAAAAAGGACATCTTTGGAGCCAGGTATG < 41bp 1 0.334822219811464 1 0.843015909194946 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 11 NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55833078 chr18:55833068 nonsynonymous SNV 0.999 3 hm6A_associated_SNPs_83811 0 0 1 1 55833068 55833093 mRNA hsa-miR-149 NEDD4L miRanda miRanda
14034 chr11 65266594 65266594 1 + C A UCEC 65266575 + 65266555 65266595 41 GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCT GGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTAT < 41bp 1 0.0424114046668746 1 0.603535950183868 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 40 MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266575 chr11:65266594 . . 0 hm6A_associated_SNPs_83832 0 0 1 1 65266592 65266614 lncRNA hsa-miR-216b-5p MALAT1 miRanda starBase2
14034 chr1 222906027 222906027 1 + C T UCEC 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTTAAAAGGACA < 41bp 1 0.789792599636644 1 0.836544513702393 experiment 0.420414800726711 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906027 stopgain 0.998 1 hm6A_associated_SNPs_83859 0 0 1 5 222906025 222906046 mRNA hsa-miR-29a C1orf58 miRanda miRanda
14034 chr1 222906027 222906027 1 + C T UCEC 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTTAAAAGGACA < 41bp 1 0.789792599636644 1 0.836544513702393 experiment 0.420414800726711 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906027 stopgain 0.998 1 hm6A_associated_SNPs_83859 0 0 1 5 222906024 222906046 mRNA hsa-miR-29b C1orf58 miRanda miRanda
14034 chr1 222906027 222906027 1 + C T UCEC 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTTAAAAGGACA < 41bp 1 0.789792599636644 1 0.836544513702393 experiment 0.420414800726711 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906027 stopgain 0.998 1 hm6A_associated_SNPs_83859 0 0 1 5 222906019 222906041 mRNA hsa-miR-199a-5p C1orf58 miRanda miRanda
14034 chr1 222906027 222906027 1 + C T UCEC 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTTAAAAGGACA < 41bp 1 0.789792599636644 1 0.836544513702393 experiment 0.420414800726711 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906027 stopgain 0.998 1 hm6A_associated_SNPs_83859 0 0 1 5 222906019 222906041 mRNA hsa-miR-199b-5p C1orf58 miRanda miRanda
14034 chr1 222906027 222906027 1 + C T UCEC 222906016 + 222905996 222906036 41 GAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACA GAAACCTGTGAAAGAACCAGACATCAAACCTTAAAAGGACA < 41bp 1 0.789792599636644 1 0.836544513702393 experiment 0.420414800726711 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 BROX ENSG00000162819 CDS Human protein_coding chr1:222906016 chr1:222906027 stopgain 0.998 1 hm6A_associated_SNPs_83859 0 0 1 5 222906025 222906046 mRNA hsa-miR-29c C1orf58 miRanda miRanda
14034 chr19 18278061 18278061 1 + A G UCEC 18278062 + 18278042 18278082 41 AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA AGAGATCGACAAGCGCATGGACAGCCTCAAGCCGGACCTCA < 41bp 1 0.746485425408195 1 0.986790060997009 experiment 0.50702914918361 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 20 PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18278062 chr19:18278061 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_83939 1 0 1 1 18278049 18278070 mRNA hsa-miR-485-5p PIK3R2 miRanda miRanda
14034 chr12 69987311 69987311 1 + T C UCEC 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCCGAACAGCTCTTTGGTGCTGCTGG < 41bp 1 0.601315942107519 1 0.144787222146988 experiment 0.797368115784961 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 18 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987311 synonymous SNV . 0 hm6A_associated_SNPs_83964 0 0 1 3 69987309 69987330 mRNA hsa-miR-29a CCT2 miRanda miRanda
14034 chr12 69987311 69987311 1 + T C UCEC 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCCGAACAGCTCTTTGGTGCTGCTGG < 41bp 1 0.601315942107519 1 0.144787222146988 experiment 0.797368115784961 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 18 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987311 synonymous SNV . 0 hm6A_associated_SNPs_83964 0 0 1 3 69987308 69987330 mRNA hsa-miR-29b CCT2 miRanda miRanda
14034 chr12 69987311 69987311 1 + T C UCEC 69987314 + 69987294 69987334 41 TTAATTTATAATTATCCTGAACAGCTCTTTGGTGCTGCTGG TTAATTTATAATTATCCCGAACAGCTCTTTGGTGCTGCTGG < 41bp 1 0.601315942107519 1 0.144787222146988 experiment 0.797368115784961 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|31281898;GSE125240;m6A-REF-seq;kidney;Control 18 CCT2 ENSG00000166226 CDS Human protein_coding chr12:69987314 chr12:69987311 synonymous SNV . 0 hm6A_associated_SNPs_83964 0 0 1 3 69987309 69987330 mRNA hsa-miR-29c CCT2 miRanda miRanda
14034 chr10 77167328 77167328 1 + A T UCEC 77167339 + 77167319 77167359 41 CCCCAACAGAGGTAGCCGGAACTTTCCTCGACGAAGGCTCC CCCCAACAGTGGTAGCCGGAACTTTCCTCGACGAAGGCTCC < 41bp 1 0.7890865274461 1 0.983744978904724 experiment 0.4218269451078 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167339 chr10:77167328 . . 0 hm6A_associated_SNPs_83972 0 0 0 2 77167311 77167332 mRNA hsa-miR-10a C10orf41 miRanda miRanda
14034 chr10 77167328 77167328 1 + A T UCEC 77167339 + 77167319 77167359 41 CCCCAACAGAGGTAGCCGGAACTTTCCTCGACGAAGGCTCC CCCCAACAGTGGTAGCCGGAACTTTCCTCGACGAAGGCTCC < 41bp 1 0.7890865274461 1 0.983744978904724 experiment 0.4218269451078 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 10 ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167339 chr10:77167328 . . 0 hm6A_associated_SNPs_83972 0 0 0 2 77167311 77167332 mRNA hsa-miR-10b C10orf41 miRanda miRanda
14034 chr4 74277796 74277796 1 + A G UCEC 74277777 + 74277757 74277797 41 CAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCAC CAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCGC < 41bp 1 0.278641322032346 1 0.129240751266479 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 40 ALB ENSG00000163631 CDS Human protein_coding chr4:74277777 chr4:74277796 nonsynonymous SNV 0.757 1 hm6A_associated_SNPs_84036 0 0 1 2 74277787 74277810 mRNA hsa-miR-103 ALB miRanda miRanda
14034 chr4 74277796 74277796 1 + A G UCEC 74277777 + 74277757 74277797 41 CAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCAC CAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCGC < 41bp 1 0.278641322032346 1 0.129240751266479 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 40 ALB ENSG00000163631 CDS Human protein_coding chr4:74277777 chr4:74277796 nonsynonymous SNV 0.757 1 hm6A_associated_SNPs_84036 0 0 1 2 74277787 74277810 mRNA hsa-miR-107 ALB miRanda miRanda
14034 chr11 65269766 65269766 1 + T C UCEC 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATCTAATAATAATTTAAAACTACTATAGAAACTGCAGAG < 41bp 1 0.051394909593434 1 0.638133108615875 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269766 . . 0 hm6A_associated_SNPs_84048 0 0 1 2 65269758 65269777 lncRNA hsa-miR-126-5p MALAT1 miRanda starBase2
14034 chr11 65269766 65269766 1 + T C UCEC 65269782 + 65269762 65269802 41 TGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAG TGATCTAATAATAATTTAAAACTACTATAGAAACTGCAGAG < 41bp 1 0.051394909593434 1 0.638133108615875 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 5 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269782 chr11:65269766 . . 0 hm6A_associated_SNPs_84048 0 0 1 2 65269756 65269778 lncRNA hsa-miR-944 MALAT1 miRanda starBase2
14034 chr20 57568581 57568581 1 + G A UCEC 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAACTGGAC < 41bp 1 0.333879831221692 1 0.974270105361938 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568581 synonymous SNV . 0 hm6A_associated_SNPs_84075 0 0 1 5 57568578 57568599 mRNA hsa-miR-302a TH1L miRanda miRanda
14034 chr20 57568581 57568581 1 + G A UCEC 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAACTGGAC < 41bp 1 0.333879831221692 1 0.974270105361938 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568581 synonymous SNV . 0 hm6A_associated_SNPs_84075 0 0 1 5 57568579 57568599 mRNA hsa-miR-302b TH1L miRanda miRanda
14034 chr20 57568581 57568581 1 + G A UCEC 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAACTGGAC < 41bp 1 0.333879831221692 1 0.974270105361938 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568581 synonymous SNV . 0 hm6A_associated_SNPs_84075 0 0 1 5 57568579 57568599 mRNA hsa-miR-302c TH1L miRanda miRanda
14034 chr20 57568581 57568581 1 + G A UCEC 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAACTGGAC < 41bp 1 0.333879831221692 1 0.974270105361938 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568581 synonymous SNV . 0 hm6A_associated_SNPs_84075 0 0 1 5 57568579 57568599 mRNA hsa-miR-302d TH1L miRanda miRanda
14034 chr20 57568581 57568581 1 + G A UCEC 57568567 + 57568547 57568587 41 TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGAC TGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAACTGGAC < 41bp 1 0.333879831221692 1 0.974270105361938 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 NELFCD ENSG00000101158 CDS Human protein_coding chr20:57568567 chr20:57568581 synonymous SNV . 0 hm6A_associated_SNPs_84075 0 0 1 5 57568579 57568599 mRNA hsa-miR-372 TH1L miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233921 51233944 mRNA hsa-miR-30c AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233923 51233944 mRNA hsa-miR-30d AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233917 51233940 mRNA hsa-miR-181a AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233916 51233940 mRNA hsa-miR-181b AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233917 51233940 mRNA hsa-miR-181c AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233911 51233931 mRNA hsa-miR-219-5p AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233923 51233944 mRNA hsa-miR-30b AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233922 51233944 mRNA hsa-miR-30e AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233922 51233943 mRNA hsa-miR-494 AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233916 51233940 mRNA hsa-miR-181d AP4E1 miRanda miRanda
14034 chr15 51233923 51233923 1 + T C UCEC 51233925 + 51233905 51233945 41 TGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGAT TGGCTCTTCAACACCAGACGACAATAATTGAATGTTTAGAT Direct Loss 1 0.794844217725189 1 0.336961895227432 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 19 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51233925 chr15:51233923 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84083 0 0 0 11 51233920 51233941 mRNA hsa-miR-543 AP4E1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035292 mRNA hsa-let-7d PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035278 mRNA hsa-miR-25 PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035278 mRNA hsa-miR-32 PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035278 mRNA hsa-miR-92a PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035275 mRNA hsa-miR-362-3p PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035278 mRNA hsa-miR-363 PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035278 mRNA hsa-miR-367 PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035275 mRNA hsa-miR-329 PDSS1 miRanda miRanda
14034 chr10 27035267 27035267 1 + T A UCEC 27035280 + 27035260 27035300 41 AGAGTGATGGTGTGCAACAAACAACCTACCTCGCCCAGCAG AGAGTGAAGGTGTGCAACAAACAACCTACCTCGCCCAGCAG < 41bp 1 0.695822025648744 1 0.762135982513428 experiment 0.608355948702512 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|30867593;GSE121942;miCLIP;HepG2;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 8 PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27035280 chr10:27035267 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84085 0 0 1 9 27035267 27035278 mRNA hsa-miR-92b PDSS1 miRanda miRanda
14034 chr7 54636856 54636856 1 + C T UCEC 54636859 + 54636839 54636879 41 CTGTAAAATCTACGGAGCGGACAGCAAAGTTGACCCTAAAC CTGTAAAATCTACGGAGTGGACAGCAAAGTTGACCCTAAAC < 41bp 1 0.754198248592465 1 0.966175079345703 experiment 0.49160350281507 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 18 VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54636859 chr7:54636856 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_84129 0 0 0 1 54636853 54636873 mRNA hsa-miR-505 VSTM2A miRanda miRanda
14034 chr1 60294502 60294502 1 + T A UCEC 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGATGATGGGGACAACTGGAGAATAAAGGTAT < 41bp 1 0.538915920975347 1 0.244564950466156 experiment 0.922168158049307 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 15 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294502 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_84156 0 0 1 1 60294492 60294516 mRNA hsa-miR-199a-5p HOOK1 miRanda miRanda
14034 chr1 93300380 93300380 1 + G A UCEC 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCATATGCACACGAACTGCCAAAATATGGTGTGAA < 41bp 1 0.23818845624621 1 0.66890674829483 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300380 synonymous SNV . 0 hm6A_associated_SNPs_84183 0 0 1 3 93300378 93300400 mRNA hsa-miR-96 RPL5 miRanda miRanda
14034 chr1 93300380 93300380 1 + G A UCEC 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCATATGCACACGAACTGCCAAAATATGGTGTGAA < 41bp 1 0.23818845624621 1 0.66890674829483 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300380 synonymous SNV . 0 hm6A_associated_SNPs_84183 0 0 1 3 93300377 93300400 mRNA hsa-miR-182 RPL5 miRanda miRanda
14034 chr1 93300380 93300380 1 + G A UCEC 93300392 + 93300372 93300412 41 TGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAA TGCGCAGCATATGCACACGAACTGCCAAAATATGGTGTGAA < 41bp 1 0.23818845624621 1 0.66890674829483 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 9 RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300392 chr1:93300380 synonymous SNV . 0 hm6A_associated_SNPs_84183 0 0 1 3 93300379 93300400 mRNA hsa-miR-1271 RPL5 miRanda miRanda
14034 chr17 58733964 58733964 1 + A G UCEC 58733971 + 58733951 58733991 41 TGAATACAGGGTGAGCATGGACAATCTTGTGCCAAAATGCT TGAATACAGGGTGGGCATGGACAATCTTGTGCCAAAATGCT < 41bp 1 0.723578109693021 1 0.864940941333771 experiment 0.552843780613959 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 14 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58733971 chr17:58733964 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84215 0 0 0 2 58733964 58733986 mRNA hsa-miR-96 PPM1D miRanda miRanda
14034 chr17 58733964 58733964 1 + A G UCEC 58733971 + 58733951 58733991 41 TGAATACAGGGTGAGCATGGACAATCTTGTGCCAAAATGCT TGAATACAGGGTGGGCATGGACAATCTTGTGCCAAAATGCT < 41bp 1 0.723578109693021 1 0.864940941333771 experiment 0.552843780613959 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 14 PPM1D ENSG00000170836 CDS Human protein_coding chr17:58733971 chr17:58733964 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_84215 0 0 0 2 58733960 58733977 mRNA hsa-miR-219-5p PPM1D miRanda miRanda
14034 chr1 11718626 11718626 1 + C T UCEC 11718616 + 11718596 11718636 41 CCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT CCTCAAGTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATT < 41bp 1 0.0988446277101446 1 0.770396888256073 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 31 FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718616 chr1:11718626 stopgain 0.984 0 hm6A_associated_SNPs_84260 0 0 1 1 11718619 11718642 mRNA hsa-miR-150 FBXO44 miRanda miRanda
14034 chr9 131847815 131847815 1 + C T UCEC 131847807 + 131847787 131847827 41 GTTTTCGCAGAATGCACCAAACAAACAACGCCAGGTTCCTG GTTTTCGCAGAATGCACCAAACAAACAATGCCAGGTTCCTG < 41bp 1 0.531162683185619 1 0.871450781822205 experiment 0.937674633628762 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 29 DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131847807 chr9:131847815 synonymous SNV . 0 hm6A_associated_SNPs_84267 0 0 1 1 131847803 131847824 mRNA hsa-miR-490-3p DOLPP1 miRanda miRanda
14034 chr9 131847815 131847815 1 + C T UCEC 131847811 + 131847791 131847831 41 TCGCAGAATGCACCAAACAAACAACGCCAGGTTCCTGGACT TCGCAGAATGCACCAAACAAACAATGCCAGGTTCCTGGACT < 41bp 1 0.628136644484218 1 0.880943059921265 experiment 0.743726711031564 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 25 DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131847811 chr9:131847815 synonymous SNV . 0 hm6A_associated_SNPs_84268 0 0 1 1 131847803 131847824 mRNA hsa-miR-490-3p DOLPP1 miRanda miRanda
14034 chr11 6592203 6592203 1 + C T UCEC 6592215 + 6592195 6592235 41 TTAGAGACCGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC TTAGAGACTGAGGCTCTAGAACTGAGCCAGTTGGTGGGCAC < 41bp 1 0.523010025814671 1 0.993174314498901 experiment 0.953979948370658 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 9 DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592215 chr11:6592203 synonymous SNV . 0 hm6A_associated_SNPs_84276 0 0 0 1 6592202 6592223 mRNA hsa-miR-24 DNHD1 miRanda miRanda
14034 chr12 104709573 104709573 1 + T C UCEC 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGCGAATGTGGGTTGC < 41bp 1 0.666311552753181 1 0.857395589351654 experiment 0.667376894493638 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709573 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_84278 0 0 1 5 104709558 104709580 mRNA hsa-miR-181a TXNRD1 miRanda miRanda
14034 chr12 104709573 104709573 1 + T C UCEC 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGCGAATGTGGGTTGC < 41bp 1 0.666311552753181 1 0.857395589351654 experiment 0.667376894493638 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709573 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_84278 0 0 1 5 104709558 104709580 mRNA hsa-miR-181b TXNRD1 miRanda miRanda
14034 chr12 104709573 104709573 1 + T C UCEC 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGCGAATGTGGGTTGC < 41bp 1 0.666311552753181 1 0.857395589351654 experiment 0.667376894493638 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709573 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_84278 0 0 1 5 104709558 104709580 mRNA hsa-miR-181c TXNRD1 miRanda miRanda
14034 chr12 104709573 104709573 1 + T C UCEC 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGCGAATGTGGGTTGC < 41bp 1 0.666311552753181 1 0.857395589351654 experiment 0.667376894493638 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709573 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_84278 0 0 1 5 104709555 104709576 mRNA hsa-miR-377 TXNRD1 miRanda miRanda
14034 chr12 104709573 104709573 1 + T C UCEC 104709566 + 104709546 104709586 41 TTGTTGTAGGTCTCGGAGGAACATGTGTGAATGTGGGTTGC TTGTTGTAGGTCTCGGAGGAACATGTGCGAATGTGGGTTGC < 41bp 1 0.666311552753181 1 0.857395589351654 experiment 0.667376894493638 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709566 chr12:104709573 nonsynonymous SNV 0.996 3 hm6A_associated_SNPs_84278 0 0 1 5 104709558 104709580 mRNA hsa-miR-181d TXNRD1 miRanda miRanda
14034 chr7 86820305 86820305 1 + C T UCEC 86820288 + 86820268 86820308 41 AGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAA AGACTCTCCTGCTACCGTTGACTCAGAAACAATAACATTAA < 41bp 1 0.296237908121775 1 0.301425635814667 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 38 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86820288 chr7:86820305 synonymous SNV . 0 hm6A_associated_SNPs_84317 0 0 1 1 86820301 86820324 mRNA hsa-miR-142-3p DMTF1 miRanda miRanda
14034 chr7 86820305 86820305 1 + C T UCEC 86820296 + 86820276 86820316 41 CTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGGA CTGCTACCGTTGACTCAGAAACAATAACATTAAACAGTGGA < 41bp 1 0.641511524329834 1 0.294850528240204 experiment 0.716976951340331 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 30 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86820296 chr7:86820305 synonymous SNV . 0 hm6A_associated_SNPs_84318 0 0 1 1 86820301 86820324 mRNA hsa-miR-142-3p DMTF1 miRanda miRanda
14034 chr19 57876407 57876407 1 + A G UCEC 57876388 + 57876368 57876408 41 CGAACAACATGTACTTGAAAACTGTGGACAAGTTCAACGAG CGAACAACATGTACTTGAAAACTGTGGACAAGTTCAACGGG < 41bp 1 0.755477717115089 1 0.994492650032043 experiment 0.489044565769823 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 40 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876388 chr19:57876407 nonsynonymous SNV 0.976 2 hm6A_associated_SNPs_84363 0 0 0 1 57876407 57876432 mRNA hsa-miR-19a TRAPPC2P1 miRanda miRanda
14034 chr12 98921723 98921723 1 + A G UCEC 98921721 + 98921701 98921741 41 ATAAAGATGATCTAGATGTAACAGAGCTCACTAATGAAGAT ATAAAGATGATCTAGATGTAACGGAGCTCACTAATGAAGAT Direct Loss 1 0.389204227787373 1 0.968689560890198 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control 23 TMPO ENSG00000120802 CDS Human protein_coding chr12:98921721 chr12:98921723 synonymous SNV . 0 hm6A_associated_SNPs_84367 0 0 1 1 98921707 98921733 mRNA hsa-miR-708 TMPO miRanda miRanda
14034 chr15 34519895 34519895 1 + G A UCEC 34519904 + 34519884 34519924 41 TTTGTTTTAGCGCTGCTGGGACATCGCCTTGGGTCCCCTCA TTTGTTTTAGCACTGCTGGGACATCGCCTTGGGTCCCCTCA < 41bp 1 0.774401733158065 1 0.016861766576767 experiment 0.451196533683869 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 12 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34519904 chr15:34519895 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_84378 0 0 1 1 34519894 34519901 mRNA hsa-miR-503 TMEM85 miRanda miRanda
14034 chr19 9453319 9453319 1 + A G UCEC 9453331 + 9453311 9453351 41 CCTTTAAAAGTCACATGCAGACTCATCCTGGTGTAAAACCC CCTTTAAAGGTCACATGCAGACTCATCCTGGTGTAAAACCC < 41bp 1 0.302680313852648 1 0.987531781196594 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 9 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453331 chr19:9453319 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_84385 0 0 1 1 9453318 9453341 mRNA hsa-miR-125a-3p ZNF559 miRanda miRanda
14034 chr19 53015460 53015460 1 + A G UCEC 53015449 + 53015429 53015469 41 TTACAAATGTGAAGCATGTGACAAAGTTTTCAGTCACAGAT TTACAAATGTGAAGCATGTGACAAAGTTTTCGGTCACAGAT < 41bp 1 0.103538549706435 1 0.999307215213776 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 32 ZNF578 ENSG00000269349 ncRNA_exonic Human antisense chr19:53015449 chr19:53015460 . . 0 hm6A_associated_SNPs_84390 0 0 0 1 53015445 53015466 mRNA hsa-miR-134 ZNF578 miRanda miRanda
14034 chr21 30698633 30698633 1 + G T UCEC 30698613 + 30698593 30698633 41 TGTCAGAAAACAGACCTTAAACTTTCACTTTTGGACCAGAG TGTCAGAAAACAGACCTTAAACTTTCACTTTTGGACCAGAT < 41bp 1 0.786296439462023 1 0.992740869522095 experiment 0.427407121075953 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30698613 chr21:30698633 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_84506 0 0 1 2 30698631 30698652 mRNA hsa-miR-27a BACH1 miRanda miRanda
14034 chr21 30698633 30698633 1 + G T UCEC 30698613 + 30698593 30698633 41 TGTCAGAAAACAGACCTTAAACTTTCACTTTTGGACCAGAG TGTCAGAAAACAGACCTTAAACTTTCACTTTTGGACCAGAT < 41bp 1 0.786296439462023 1 0.992740869522095 experiment 0.427407121075953 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 41 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30698613 chr21:30698633 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_84506 0 0 1 2 30698631 30698652 mRNA hsa-miR-27b BACH1 miRanda miRanda
14034 chr21 30698633 30698633 1 + G T UCEC 30698627 + 30698607 30698647 41 CCTTAAACTTTCACTTTTGGACCAGAGGGATCTAGAAACTG CCTTAAACTTTCACTTTTGGACCAGATGGATCTAGAAACTG < 41bp 1 0.681783269023415 1 0.992391884326935 experiment 0.636433461953171 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30698627 chr21:30698633 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_84507 0 0 1 2 30698631 30698652 mRNA hsa-miR-27a BACH1 miRanda miRanda
14034 chr21 30698633 30698633 1 + G T UCEC 30698627 + 30698607 30698647 41 CCTTAAACTTTCACTTTTGGACCAGAGGGATCTAGAAACTG CCTTAAACTTTCACTTTTGGACCAGATGGATCTAGAAACTG < 41bp 1 0.681783269023415 1 0.992391884326935 experiment 0.636433461953171 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 27 BACH1 ENSG00000156273 CDS Human protein_coding chr21:30698627 chr21:30698633 nonsynonymous SNV 0.990 1 hm6A_associated_SNPs_84507 0 0 1 2 30698631 30698652 mRNA hsa-miR-27b BACH1 miRanda miRanda
14034 chr12 124104130 124104130 1 + G A UCEC 124104136 + 124104116 124104156 41 AGAGAAAAGCAGAGGCAGAAACTCCTGGAGCAACAAAGAAG AGAGAAAAGCAGAGACAGAAACTCCTGGAGCAACAAAGAAG < 41bp 1 0.628564934219862 1 0.964118421077728 experiment 0.742870131560277 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 DDX55 ENSG00000111364 CDS Human protein_coding chr12:124104136 chr12:124104130 synonymous SNV . 0 hm6A_associated_SNPs_84511 0 0 1 2 124104116 124104136 mRNA hsa-miR-346 DDX55 miRanda miRanda
14034 chr12 124104130 124104130 1 + G A UCEC 124104136 + 124104116 124104156 41 AGAGAAAAGCAGAGGCAGAAACTCCTGGAGCAACAAAGAAG AGAGAAAAGCAGAGACAGAAACTCCTGGAGCAACAAAGAAG < 41bp 1 0.628564934219862 1 0.964118421077728 experiment 0.742870131560277 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 DDX55 ENSG00000111364 CDS Human protein_coding chr12:124104136 chr12:124104130 synonymous SNV . 0 hm6A_associated_SNPs_84511 0 0 1 2 124104115 124104136 mRNA hsa-miR-544 DDX55 miRanda miRanda
14034 chr1 145281388 145281388 1 + C T UCEC 145281386 + 145281366 145281406 41 TAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCAT TAGGTAAGGAGTGCCAATGGACTGATGCCTGCCTGTCTCAT < 41bp 1 0.160596021758921 1 0.77410626411438 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 NOTCH2NL ENSG00000213240;ENSG00000255168 CDS Human other chr1:145281386 chr1:145281388 synonymous SNV . 0 hm6A_associated_SNPs_84529 0 0 1 1 145281387 145281409 mRNA hsa-miR-185 NOTCH2NL miRanda miRanda
14034 chr8 23116593 23116593 1 + G A UCEC 23116609 + 23116589 23116629 41 CCCAGGATGAAGTTTCTCAGACTCTGGCTGGTGGGGTAACA CCCAAGATGAAGTTTCTCAGACTCTGGCTGGTGGGGTAACA < 41bp 1 0.143116369559696 1 0.139902383089066 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 5 CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23116609 chr8:23116593 synonymous SNV . 0 hm6A_associated_SNPs_84543 0 0 1 1 23116587 23116607 mRNA hsa-miR-146a CHMP7 miRanda miRanda
14034 chr5 134229294 134229294 1 + G A UCEC 134229282 + 134229262 134229302 41 CAGTTTGGCCCCTCACTTTAACTCTCTGCCCCGGGCATTTC CAGTTTGGCCCCTCACTTTAACTCTCTGCCCCAGGCATTTC < 41bp 1 0.668916036798835 1 0.0359668433666229 experiment 0.662167926402329 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 33 TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134229282 chr5:134229294 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_84548 0 0 1 1 134229280 134229301 mRNA hsa-miR-365 TXNDC15 miRanda miRanda
14034 chr11 120957709 120957709 1 + C A UCEC 120957696 + 120957676 120957716 41 CATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCC CATGCTTCTCTACTATTTTGACCATGAAGCACCATTTGGCC < 41bp 1 0.726286037620249 1 0.924183547496796 experiment 0.547427924759501 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 34 TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957696 chr11:120957709 synonymous SNV . 0 hm6A_associated_SNPs_84640 0 0 1 2 120957698 120957722 mRNA hsa-miR-330-5p TBCEL miRanda miRanda
14034 chr11 120957709 120957709 1 + C A UCEC 120957696 + 120957676 120957716 41 CATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCC CATGCTTCTCTACTATTTTGACCATGAAGCACCATTTGGCC < 41bp 1 0.726286037620249 1 0.924183547496796 experiment 0.547427924759501 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 34 TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957696 chr11:120957709 synonymous SNV . 0 hm6A_associated_SNPs_84640 0 0 1 2 120957703 120957722 mRNA hsa-miR-326 TBCEL miRanda miRanda
14034 chr7 104748032 104748032 1 + C T UCEC 104748038 + 104748018 104748058 41 CCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAGCC CCTGGAAACGCCTGTACATGACAGGGCTGAGCCCAACAGCC < 41bp 1 0.79122159073341 1 0.995524287223816 experiment 0.41755681853318 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748038 chr7:104748032 nonsynonymous SNV 0.950 1 hm6A_associated_SNPs_84675 0 0 1 2 104748029 104748051 mRNA hsa-miR-24 MLL5 miRanda miRanda
14034 chr7 104748032 104748032 1 + C T UCEC 104748038 + 104748018 104748058 41 CCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAGCC CCTGGAAACGCCTGTACATGACAGGGCTGAGCCCAACAGCC < 41bp 1 0.79122159073341 1 0.995524287223816 experiment 0.41755681853318 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control 15 KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748038 chr7:104748032 nonsynonymous SNV 0.950 1 hm6A_associated_SNPs_84675 0 0 1 2 104748020 104748044 mRNA hsa-miR-339-5p MLL5 miRanda miRanda
14034 chr19 17836983 17836983 1 + C T UCEC 17837002 + 17836982 17837022 41 GCTGGTCAACGGTGGCTCAAACCCCAAGTCCAGTTTCTGGA GTTGGTCAACGGTGGCTCAAACCCCAAGTCCAGTTTCTGGA < 41bp 1 0.346688518717238 1 0.978754162788391 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 2 MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837002 chr19:17836983 synonymous SNV . 0 hm6A_associated_SNPs_84694 0 0 1 1 17836963 17836983 mRNA hsa-miR-128 MAP1S miRanda miRanda
14034 chr1 60294499 60294499 1 + A G UCEC 60294508 + 60294488 60294528 41 AATTAAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTAT AATTAAAGAGGGTGTTGGGGACAACTGGAGAATAAAGGTAT < 41bp 1 0.57129432914768 1 0.0559539496898651 experiment 0.85741134170464 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 12 HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294508 chr1:60294499 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_84698 0 0 1 1 60294492 60294516 mRNA hsa-miR-199a-5p HOOK1 miRanda miRanda
14034 chr10 97920445 97920445 1 + G C UCEC 97920454 + 97920434 97920474 41 GTTTTGTGGTAGAGTATTTGACAATCAGGATACTTGGGCTG GTTTTGTGGTACAGTATTTGACAATCAGGATACTTGGGCTG < 41bp 1 0.780230602533212 1 0.968004822731018 experiment 0.439538794933575 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920454 chr10:97920445 . 1.000 2 hm6A_associated_SNPs_84702 0 0 1 4 97920439 97920460 mRNA hsa-miR-219-5p ZNF518A miRanda miRanda
14034 chr10 97920445 97920445 1 + G C UCEC 97920454 + 97920434 97920474 41 GTTTTGTGGTAGAGTATTTGACAATCAGGATACTTGGGCTG GTTTTGTGGTACAGTATTTGACAATCAGGATACTTGGGCTG < 41bp 1 0.780230602533212 1 0.968004822731018 experiment 0.439538794933575 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920454 chr10:97920445 . 1.000 2 hm6A_associated_SNPs_84702 0 0 1 4 97920431 97920452 mRNA hsa-miR-200b ZNF518A miRanda miRanda
14034 chr10 97920445 97920445 1 + G C UCEC 97920454 + 97920434 97920474 41 GTTTTGTGGTAGAGTATTTGACAATCAGGATACTTGGGCTG GTTTTGTGGTACAGTATTTGACAATCAGGATACTTGGGCTG < 41bp 1 0.780230602533212 1 0.968004822731018 experiment 0.439538794933575 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920454 chr10:97920445 . 1.000 2 hm6A_associated_SNPs_84702 0 0 1 4 97920430 97920452 mRNA hsa-miR-200c ZNF518A miRanda miRanda
14034 chr10 97920445 97920445 1 + G C UCEC 97920454 + 97920434 97920474 41 GTTTTGTGGTAGAGTATTTGACAATCAGGATACTTGGGCTG GTTTTGTGGTACAGTATTTGACAATCAGGATACTTGGGCTG < 41bp 1 0.780230602533212 1 0.968004822731018 experiment 0.439538794933575 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 12 ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97920454 chr10:97920445 . 1.000 2 hm6A_associated_SNPs_84702 0 0 1 4 97920431 97920452 mRNA hsa-miR-429 ZNF518A miRanda miRanda
14034 chr8 22052339 22052339 1 + G A UCEC 22052343 + 22052323 22052363 41 TGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC TGGCTATGAGAAGCCTAATGACATCAAGAGCACGTCCAGCC < 41bp 1 0.589699805404589 1 0.964885234832764 experiment 0.820600389190822 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 BMP1 ENSG00000168487 CDS Human protein_coding chr8:22052343 chr8:22052339 nonsynonymous SNV 0.910 2 hm6A_associated_SNPs_84707 0 0 0 1 22052333 22052357 mRNA hsa-miR-187 BMP1 miRanda miRanda
14034 chr5 37697793 37697793 1 + T C UCEC 37697803 + 37697783 37697823 41 GGCTCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTT GGCTCATGACCCGGGCACAGACACTTCTTGCGTGACTTTTT < 41bp 1 0.644293265247647 1 0.163200110197067 experiment 0.711413469504707 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697803 chr5:37697793 nonsynonymous SNV 0.991 0 hm6A_associated_SNPs_84750 0 0 1 2 37697782 37697809 mRNA hsa-miR-372 WDR70 miRanda miRanda
14034 chr5 37697793 37697793 1 + T C UCEC 37697803 + 37697783 37697823 41 GGCTCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTT GGCTCATGACCCGGGCACAGACACTTCTTGCGTGACTTTTT < 41bp 1 0.644293265247647 1 0.163200110197067 experiment 0.711413469504707 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 11 WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697803 chr5:37697793 nonsynonymous SNV 0.991 0 hm6A_associated_SNPs_84750 0 0 1 2 37697785 37697805 mRNA hsa-miR-431 WDR70 miRanda miRanda
14034 chr6 83848556 83848556 1 + A G UCEC 83848553 + 83848533 83848573 41 TTCTAGAACACAGAGTAATGACTATTCCTGAAGAGAATGAA TTCTAGAACACAGAGTAATGACTGTTCCTGAAGAGAATGAA < 41bp 1 0.558812555558027 1 0.871832966804504 experiment 0.882374888883945 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control 24 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83848553 chr6:83848556 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_84766 0 0 1 1 83848541 83848561 mRNA hsa-miR-613 DOPEY1 miRanda miRanda
14034 chr11 31805082 31805082 1 + C T UCEC 31805065 + 31805045 31805085 41 CGGAGGCAAGAAGCACCTGGACTTCTAGGGATTCCTCCTTA CGGAGGCAAGAAGCACCTGGACTTCTAGGGATTCCTCTTTA < 41bp 1 0.754382571326552 1 0.963239550590515 experiment 0.491234857346896 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 38 ELP4 ENSG00000109911 CDS Human protein_coding chr11:31805065 chr11:31805082 nonsynonymous SNV 0.439 1 hm6A_associated_SNPs_84785 0 0 1 1 31805078 31805101 mRNA hsa-miR-217 ELP4 miRanda miRanda
14034 chr19 58773758 58773758 1 + A G UCEC 58773761 + 58773741 58773781 41 AGTTAGTTGCACATAAAAGAACTCACACTGGAGAAAAGCCC AGTTAGTTGCACATAAAGGAACTCACACTGGAGAAAAGCCC < 41bp 1 0.673436009971565 1 0.999972581863403 experiment 0.653127980056869 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773761 chr19:58773758 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_84893 0 0 1 3 58773753 58773772 mRNA hsa-miR-199a-5p ZNF544 miRanda miRanda
14034 chr19 58773758 58773758 1 + A G UCEC 58773761 + 58773741 58773781 41 AGTTAGTTGCACATAAAAGAACTCACACTGGAGAAAAGCCC AGTTAGTTGCACATAAAGGAACTCACACTGGAGAAAAGCCC < 41bp 1 0.673436009971565 1 0.999972581863403 experiment 0.653127980056869 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773761 chr19:58773758 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_84893 0 0 1 3 58773747 58773772 mRNA hsa-miR-199b-5p ZNF544 miRanda miRanda
14034 chr19 58773758 58773758 1 + A G UCEC 58773761 + 58773741 58773781 41 AGTTAGTTGCACATAAAAGAACTCACACTGGAGAAAAGCCC AGTTAGTTGCACATAAAGGAACTCACACTGGAGAAAAGCCC < 41bp 1 0.673436009971565 1 0.999972581863403 experiment 0.653127980056869 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|25491922;GSE54921;PA-m6A-seq;HeLa;Control 18 ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773761 chr19:58773758 nonsynonymous SNV 0.972 3 hm6A_associated_SNPs_84893 0 0 1 3 58773750 58773771 mRNA hsa-miR-125a-3p ZNF544 miRanda miRanda
14034 chr11 6503435 6503435 1 + C T UCEC 6503421 + 6503401 6503441 41 GTGCCAGGCGTTGCTGCTGAACAGCCTGGGGTCTCTCCATC GTGCCAGGCGTTGCTGCTGAACAGCCTGGGGTCTTTCCATC < 41bp 1 0.776827063308608 1 0.969879627227783 experiment 0.446345873382784 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 35 TIMM10B ENSG00000132286;ENSG00000265264 CDS Human other chr11:6503421 chr11:6503435 nonsynonymous SNV 0.033 1 hm6A_associated_SNPs_84906 0 0 1 1 6503428 6503450 mRNA hsa-miR-22 FXC1 miRanda miRanda
14034 chr2 202149868 202149868 1 + C T UCEC 202149853 + 202149833 202149873 41 AGAAAGGTATACCTGTTGAGACTGATTCAGAGGAGCAACCC AGAAAGGTATACCTGTTGAGACTGATTCAGAGGAGTAACCC < 41bp 1 0.727381919032107 1 0.958461225032806 experiment 0.545236161935786 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control 36 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149853 chr2:202149868 stopgain 0.000 0 hm6A_associated_SNPs_84907 0 0 1 1 202149854 202149875 mRNA hsa-miR-296-3p CASP8 miRanda miRanda
14034 chr17 34147415 34147415 1 + G A UCEC 34147412 + 34147392 34147432 41 CAACCATATAATAACCAGGGACAGCAGCAAAACATGGAATC CAACCATATAATAACCAGGGACAACAGCAAAACATGGAATC < 41bp 1 0.768550460500906 1 0.818479835987091 experiment 0.462899078998189 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 TAF15 ENSG00000172660 CDS Human other chr17:34147412 chr17:34147415 nonsynonymous SNV . 0 hm6A_associated_SNPs_84909 0 0 1 2 34147406 34147425 mRNA hsa-miR-129-5p TAF15 miRanda miRanda
14034 chr17 34147415 34147415 1 + G A UCEC 34147412 + 34147392 34147432 41 CAACCATATAATAACCAGGGACAGCAGCAAAACATGGAATC CAACCATATAATAACCAGGGACAACAGCAAAACATGGAATC < 41bp 1 0.768550460500906 1 0.818479835987091 experiment 0.462899078998189 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31548708;GSE125780;DART-seq;HEK293T;Control 24 TAF15 ENSG00000172660 CDS Human other chr17:34147412 chr17:34147415 nonsynonymous SNV . 0 hm6A_associated_SNPs_84909 0 0 1 2 34147399 34147420 mRNA hsa-miR-370 TAF15 miRanda miRanda
14034 chr10 70502189 70502189 1 + A T UCEC 70502193 + 70502173 70502213 41 CTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCA CTCAGCCAACAGCACATATAACTGTATCATATCCAACACCA < 41bp 1 0.32888860471562 1 0.225639790296555 experiment 1 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 17 CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70502193 chr10:70502189 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_84946 0 0 1 1 70502169 70502189 mRNA hsa-miR-218 CCAR1 miRanda miRanda
14034 chr4 178274618 178274618 1 + C T UCEC 178274599 + 178274579 178274619 41 GAACTACAACTCTTGTCTTGACTGATTTTAGCAATAAATCC GAACTACAACTCTTGTCTTGACTGATTTTAGCAATAAATTC < 41bp 1 0.66042440891391 1 0.990215420722961 experiment 0.67915118217218 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 40 NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274599 chr4:178274618 nonsynonymous SNV 0.922 2 hm6A_associated_SNPs_84964 0 0 1 1 178274598 178274620 mRNA hsa-miR-876-5p NEIL3 miRanda miRanda
14034 chr11 65266835 65266835 1 + G T UCEC 65266837 + 65266817 65266857 41 AAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAAT AAAGAAAATTGAGAGAAATGACTACAGAGCCCCGAATTAAT < 41bp 1 0.15408115104027 1 0.766969442367554 experiment 1 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control|26593424;GSE73405;miCLIP;HepG2;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|24981863;GSE54365;m6A-seq with improved protocol;A549;Control|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31328227;GSE128699;miCLIP;HCT116;ZCCHC4 Knockout 19 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266837 chr11:65266835 . . 0 hm6A_associated_SNPs_84993 0 0 1 1 65266828 65266848 lncRNA hsa-miR-760 MALAT1 miRanda starBase2
14034 chr12 108086790 108086790 1 + G A UCEC 108086779 + 108086759 108086799 41 TTTTTTCCTCTCACTTAGGAACAATATGAACGTGAAGATTT TTTTTTCCTCTCACTTAGGAACAATATGAACATGAAGATTT < 41bp 1 0.783800103312746 1 0.567315280437469 experiment 0.432399793374509 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 32 PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086779 chr12:108086790 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_85000 0 0 1 1 108086780 108086803 mRNA hsa-miR-539 PWP1 miRanda miRanda
14034 chr19 9453571 9453571 1 + G A UCEC 9453583 + 9453563 9453603 41 GCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCC GCCTTACAATACACATGAGAACTCACACTGGTGAACGGCCC < 41bp 1 0.35698291788148 1 0.96880441904068 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 9 ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453583 chr19:9453571 nonsynonymous SNV 0.992 0 hm6A_associated_SNPs_85017 0 0 1 1 9453571 9453594 mRNA hsa-miR-199b-5p ZNF559 miRanda miRanda
14034 chr1 225976963 225976963 1 + C T UCEC 225976957 + 225976937 225976977 41 GACAGTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTA GACAGTGTTTGGTGTATAAAACAGACTAAGCTCAAGATGTA < 41bp 1 0.778056722419334 1 0.702494382858276 experiment 0.443886555161332 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 27 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976957 chr1:225976963 stopgain 0.999 0 hm6A_associated_SNPs_85051 0 0 1 2 225976945 225976966 mRNA hsa-miR-133a SRP9 miRanda miRanda
14034 chr1 225976963 225976963 1 + C T UCEC 225976957 + 225976937 225976977 41 GACAGTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTA GACAGTGTTTGGTGTATAAAACAGACTAAGCTCAAGATGTA < 41bp 1 0.778056722419334 1 0.702494382858276 experiment 0.443886555161332 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 27 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976957 chr1:225976963 stopgain 0.999 0 hm6A_associated_SNPs_85051 0 0 1 2 225976945 225976966 mRNA hsa-miR-133b SRP9 miRanda miRanda
14034 chr20 2637099 2637099 1 + A G UCEC 2637083 + 2637063 2637103 41 GGTAACACTCCAAAATATGGACTCATTTTCCACTCCACCTT GGTAACACTCCAAAATATGGACTCATTTTCCACTCCGCCTT < 41bp 1 0.671302017656323 1 0.951887249946594 experiment 0.657395964687354 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637083 chr20:2637099 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85052 0 0 1 2 2637098 2637120 mRNA hsa-miR-22 NOP56 miRanda miRanda
14034 chr20 2637099 2637099 1 + A G UCEC 2637083 + 2637063 2637103 41 GGTAACACTCCAAAATATGGACTCATTTTCCACTCCACCTT GGTAACACTCCAAAATATGGACTCATTTTCCACTCCGCCTT < 41bp 1 0.671302017656323 1 0.951887249946594 experiment 0.657395964687354 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637083 chr20:2637099 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85052 0 0 1 2 2637080 2637099 mRNA hsa-miR-122 NOP56 miRanda miRanda
14034 chr11 65270638 65270638 1 + G T UCEC 65270642 + 65270622 65270662 41 ATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAG ATTTCATCTGGGAGCATAAAACAGCAGGCAGCTGTTAACAG < 41bp 1 0.239498848194674 1 0.363235741853714 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270642 chr11:65270638 . . 0 hm6A_associated_SNPs_85098 0 0 1 3 65270634 65270655 lncRNA hsa-miR-22-3p MALAT1 miRanda starBase2
14034 chr11 65270638 65270638 1 + G T UCEC 65270642 + 65270622 65270662 41 ATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAG ATTTCATCTGGGAGCATAAAACAGCAGGCAGCTGTTAACAG < 41bp 1 0.239498848194674 1 0.363235741853714 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270642 chr11:65270638 . . 0 hm6A_associated_SNPs_85098 0 0 1 3 65270629 65270650 lncRNA hsa-miR-370-3p MALAT1 miRanda starBase2
14034 chr11 65270638 65270638 1 + G T UCEC 65270642 + 65270622 65270662 41 ATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAG ATTTCATCTGGGAGCATAAAACAGCAGGCAGCTGTTAACAG < 41bp 1 0.239498848194674 1 0.363235741853714 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 17 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270642 chr11:65270638 . . 0 hm6A_associated_SNPs_85098 0 0 1 3 65270629 65270650 lncRNA hsa-miR-6893-3p MALAT1 miRanda starBase2
14034 chr11 13395721 13395721 1 + G T UCEC 13395716 + 13395696 13395736 41 TGAATATTTTCACCAAGATGACATAGGACATCTTGCAGAAT TGAATATTTTCACCAAGATGACATATGACATCTTGCAGAAT < 41bp 1 0.60829825732757 1 0.0323259234428406 experiment 0.78340348534486 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 26 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13395716 chr11:13395721 stopgain 1.000 1 hm6A_associated_SNPs_85101 0 0 0 1 13395715 13395736 mRNA hsa-miR-544 ARNTL miRanda miRanda
14034 chr4 74274482 74274482 1 + T C UCEC 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGCG < 41bp 1 0.0683646654494798 1 0.846714317798615 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 40 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274482 nonsynonymous SNV 0.113 5 hm6A_associated_SNPs_85125 0 0 1 5 74274465 74274489 mRNA hsa-miR-148a ALB miRanda miRanda
14034 chr4 74274482 74274482 1 + T C UCEC 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGCG < 41bp 1 0.0683646654494798 1 0.846714317798615 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 40 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274482 nonsynonymous SNV 0.113 5 hm6A_associated_SNPs_85125 0 0 1 5 74274469 74274489 mRNA hsa-miR-152 ALB miRanda miRanda
14034 chr4 74274482 74274482 1 + T C UCEC 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGCG < 41bp 1 0.0683646654494798 1 0.846714317798615 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 40 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274482 nonsynonymous SNV 0.113 5 hm6A_associated_SNPs_85125 0 0 1 5 74274465 74274488 mRNA hsa-miR-301a ALB miRanda miRanda
14034 chr4 74274482 74274482 1 + T C UCEC 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGCG < 41bp 1 0.0683646654494798 1 0.846714317798615 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 40 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274482 nonsynonymous SNV 0.113 5 hm6A_associated_SNPs_85125 0 0 1 5 74274465 74274489 mRNA hsa-miR-148b ALB miRanda miRanda
14034 chr4 74274482 74274482 1 + T C UCEC 74274463 + 74274443 74274483 41 AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG AACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGCG < 41bp 1 0.0683646654494798 1 0.846714317798615 experiment 1 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock|26593424;GSE73405;miCLIP;HepG2;Control 40 ALB ENSG00000163631 CDS Human protein_coding chr4:74274463 chr4:74274482 nonsynonymous SNV 0.113 5 hm6A_associated_SNPs_85125 0 0 1 5 74274465 74274488 mRNA hsa-miR-301b ALB miRanda miRanda
14034 chr19 10906091 10906091 1 + C T UCEC 10906100 + 10906080 10906120 41 GATCAGCTATGCCATTAAGAACATCCATGGAGTCAGGCAAG GATCAGCTATGTCATTAAGAACATCCATGGAGTCAGGCAAG < 41bp 1 0.698260079792583 1 0.675252318382263 experiment 0.603479840414835 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 12 DNM2 ENSG00000079805 CDS Human protein_coding chr19:10906100 chr19:10906091 nonsynonymous SNV 0.819 3 hm6A_associated_SNPs_85146 0 0 1 1 10906084 10906106 mRNA hsa-miR-876-5p DNM2 miRanda miRanda
14034 chr5 86627191 86627191 1 + C T UCEC 86627185 + 86627165 86627205 41 GTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAAC GTGGTATCACGGAAAACTTGACAGAATGATAGCAGAAGAAC < 41bp 1 0.36382269222589 1 0.199944913387299 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;brain;Control 27 RASA1 ENSG00000145715 CDS Human protein_coding chr5:86627185 chr5:86627191 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_85154 0 0 1 1 86627178 86627202 mRNA hsa-miR-544 RASA1 miRanda miRanda
14034 chr19 7975668 7975668 1 + C T UCEC 7975680 + 7975660 7975700 41 AGCGCATTCTGGGCAAGATGACAGTGGCGGTGAGTGACCAG AGCGCATTTTGGGCAAGATGACAGTGGCGGTGAGTGACCAG < 41bp 1 0.353288616038682 1 0.998088121414185 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control|31281898;GSE125240;m6A-REF-seq;liver;Control 9 MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7975680 chr19:7975668 synonymous SNV . 0 hm6A_associated_SNPs_85193 0 0 1 1 7975662 7975685 mRNA hsa-miR-217 MAP2K7 miRanda miRanda
14034 chr10 62551966 62551966 1 + G T UCEC 62551959 + 62551939 62551979 41 AGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA AGAAGTGGAATCTTTACAGGACTATAATAATACATTTCCCA < 41bp 1 0.767533416489485 1 0.931582152843475 experiment 0.464933167021029 Functional Loss 26121403;GSE63753;miCLIP;HEK293;sysy_antinbody|26121403;GSE63753;miCLIP;HEK293;Control|28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 28 CDK1 ENSG00000170312 CDS Human protein_coding chr10:62551959 chr10:62551966 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85223 0 0 1 1 62551957 62551978 mRNA hsa-miR-203 CDK1 miRanda miRanda
14034 chr4 185599476 185599476 1 + T G UCEC 185599470 + 185599450 185599490 41 TTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGT TTTGGAGGTTACTGAAGATAACAAATGTTTTCCTATACAGT < 41bp 1 0.589578135308023 1 0.0282077193260193 experiment 0.820843729383953 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control 27 PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185599470 chr4:185599476 nonsynonymous SNV 0.620 1 hm6A_associated_SNPs_85294 0 0 1 1 185599473 185599494 mRNA hsa-miR-134 CCDC111 miRanda miRanda
14034 chr17 42744068 42744068 1 + T G UCEC 42744051 + 42744031 42744071 41 AGACAAATGATACAGCTAAGACAACATTCCAAGAATATCCA AGACAAATGATACAGCTAAGACAACATTCCAAGAATAGCCA < 41bp 1 0.76053408606338 1 0.915035367012024 experiment 0.478931827873241 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 38 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744051 chr17:42744068 stopgain 1.000 0 hm6A_associated_SNPs_85306 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr17 42744068 42744068 1 + T G UCEC 42744082 + 42744062 42744102 41 AGAATATCCACTTATCAAAAACTGTTTTACACCCCAAACTG AGAATAGCCACTTATCAAAAACTGTTTTACACCCCAAACTG < 41bp 1 0.636127525657369 1 0.941127896308899 experiment 0.727744948685262 Functional Loss 28920958;GSE98623;miCLIP;MOLM13;Control 7 MEIOC ENSG00000180336 CDS Human protein_coding chr17:42744082 chr17:42744068 stopgain 1.000 0 hm6A_associated_SNPs_85307 0 0 0 1 42744051 42744071 mRNA hsa-miR-876-5p C17orf104 miRanda miRanda
14034 chr10 27459497 27459497 1 + G A UCEC 27459480 + 27459460 27459500 41 TATACCAATGATAGCAAAAAACCTTATGTGTGAACTCGATG TATACCAATGATAGCAAAAAACCTTATGTGTGAACTCAATG < 41bp 1 0.712287034924993 1 0.971096634864807 experiment 0.575425930150013 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459480 chr10:27459497 nonsynonymous SNV 0.981 4 hm6A_associated_SNPs_85312 0 0 1 2 27459488 27459511 mRNA hsa-miR-27a MASTL miRanda miRanda
14034 chr10 27459497 27459497 1 + G A UCEC 27459480 + 27459460 27459500 41 TATACCAATGATAGCAAAAAACCTTATGTGTGAACTCGATG TATACCAATGATAGCAAAAAACCTTATGTGTGAACTCAATG < 41bp 1 0.712287034924993 1 0.971096634864807 experiment 0.575425930150013 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;A549;Control 38 MASTL ENSG00000120539 CDS Human protein_coding chr10:27459480 chr10:27459497 nonsynonymous SNV 0.981 4 hm6A_associated_SNPs_85312 0 0 1 2 27459488 27459511 mRNA hsa-miR-27b MASTL miRanda miRanda
14034 chr13 73357637 73357637 1 + A C UCEC 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAACAAAGTGAACATCTCTAGTTCTCTGGAAT < 41bp 1 0.382854639671133 1 0.749512016773224 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357637 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_85346 0 0 1 2 73357636 73357660 mRNA hsa-miR-146a PIBF1 miRanda miRanda
14034 chr13 73357637 73357637 1 + A C UCEC 73357645 + 73357625 73357665 41 AAAGGAGTCAAAAAAAGTGAACATCTCTAGTTCTCTGGAAT AAAGGAGTCAAACAAAGTGAACATCTCTAGTTCTCTGGAAT < 41bp 1 0.382854639671133 1 0.749512016773224 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 13 PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73357645 chr13:73357637 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_85346 0 0 1 2 73357636 73357660 mRNA hsa-miR-146b-5p PIBF1 miRanda miRanda
14034 chr2 86352160 86352160 1 + G T UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGATAAAAATGAACATTCCTATTGCACAATGAT < 41bp 1 0.799033929488059 1 0.0695045590400696 experiment 0.401932141023883 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352160 nonsynonymous SNV 0.962 3 hm6A_associated_SNPs_85360 0 0 1 5 86352155 86352176 mRNA hsa-miR-1 PTCD3 miRanda miRanda
14034 chr2 86352160 86352160 1 + G T UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGATAAAAATGAACATTCCTATTGCACAATGAT < 41bp 1 0.799033929488059 1 0.0695045590400696 experiment 0.401932141023883 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352160 nonsynonymous SNV 0.962 3 hm6A_associated_SNPs_85360 0 0 1 5 86352155 86352176 mRNA hsa-miR-206 PTCD3 miRanda miRanda
14034 chr2 86352160 86352160 1 + G T UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGATAAAAATGAACATTCCTATTGCACAATGAT < 41bp 1 0.799033929488059 1 0.0695045590400696 experiment 0.401932141023883 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352160 nonsynonymous SNV 0.962 3 hm6A_associated_SNPs_85360 0 0 1 5 86352140 86352161 mRNA hsa-miR-330-5p PTCD3 miRanda miRanda
14034 chr2 86352160 86352160 1 + G T UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGATAAAAATGAACATTCCTATTGCACAATGAT < 41bp 1 0.799033929488059 1 0.0695045590400696 experiment 0.401932141023883 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352160 nonsynonymous SNV 0.962 3 hm6A_associated_SNPs_85360 0 0 1 5 86352142 86352161 mRNA hsa-miR-326 PTCD3 miRanda miRanda
14034 chr2 86352160 86352160 1 + G T UCEC 86352169 + 86352149 86352189 41 CTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGAT CTAATGCCAGATAAAAATGAACATTCCTATTGCACAATGAT < 41bp 1 0.799033929488059 1 0.0695045590400696 experiment 0.401932141023883 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 12 PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86352169 chr2:86352160 nonsynonymous SNV 0.962 3 hm6A_associated_SNPs_85360 0 0 1 5 86352157 86352176 mRNA hsa-miR-613 PTCD3 miRanda miRanda
14034 chr7 135322737 135322737 1 + A C UCEC 135322723 + 135322703 135322743 41 CGCTTTGGTGGCTCTGACAGACTGCGTCAGTTTAAATTTCA CGCTTTGGTGGCTCTGACAGACTGCGTCAGTTTACATTTCA < 41bp 1 0.3758431098505 1 0.394321084022522 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 35 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135322723 chr7:135322737 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_85382 0 0 1 1 135322728 135322748 mRNA hsa-miR-431 NUP205 miRanda miRanda
14034 chr11 107925453 107925453 1 + G T UCEC 107925466 + 107925446 107925486 41 CAACAGAGAGATTTTATAGAACACAAGCACCCTCGTATTTA CAACAGATAGATTTTATAGAACACAAGCACCCTCGTATTTA < 41bp 1 0.685131605524945 1 0.63706111907959 experiment 0.62973678895011 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 CUL5 ENSG00000166266 CDS Human protein_coding chr11:107925466 chr11:107925453 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_85401 0 0 1 1 107925439 107925459 mRNA hsa-miR-216b CUL5 miRanda miRanda
14034 chr17 61662638 61662638 1 + T C UCEC 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGCGTCA < 41bp 1 0.786480778474972 1 0.0203366875648499 experiment 0.427038443050055 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662638 synonymous SNV . 0 hm6A_associated_SNPs_85460 0 0 1 2 61662624 61662645 mRNA hsa-miR-25 DCAF7 miRanda miRanda
14034 chr17 61662638 61662638 1 + T C UCEC 61662622 + 61662602 61662642 41 CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCA CACACCTGTCGCCAGGTTAAACAACCATCGAGCATGCGTCA < 41bp 1 0.786480778474972 1 0.0203366875648499 experiment 0.427038443050055 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 37 DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662622 chr17:61662638 synonymous SNV . 0 hm6A_associated_SNPs_85460 0 0 1 2 61662623 61662645 mRNA hsa-miR-367 DCAF7 miRanda miRanda
14034 chr6 161530935 161530935 1 + G A UCEC 161530938 + 161530918 161530958 41 GCATGGCATAGTCCACCGTGACATTAAAGGTAATCCCACAC GCATGGCATAGTCCACCATGACATTAAAGGTAATCCCACAC < 41bp 1 0.28755521387018 1 0.744068682193756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530938 chr6:161530935 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_85466 0 0 1 3 161530932 161530946 mRNA hsa-miR-96 MAP3K4 miRanda miRanda
14034 chr6 161530935 161530935 1 + G A UCEC 161530938 + 161530918 161530958 41 GCATGGCATAGTCCACCGTGACATTAAAGGTAATCCCACAC GCATGGCATAGTCCACCATGACATTAAAGGTAATCCCACAC < 41bp 1 0.28755521387018 1 0.744068682193756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530938 chr6:161530935 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_85466 0 0 1 3 161530930 161530946 mRNA hsa-miR-367 MAP3K4 miRanda miRanda
14034 chr6 161530935 161530935 1 + G A UCEC 161530938 + 161530918 161530958 41 GCATGGCATAGTCCACCGTGACATTAAAGGTAATCCCACAC GCATGGCATAGTCCACCATGACATTAAAGGTAATCCCACAC < 41bp 1 0.28755521387018 1 0.744068682193756 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530938 chr6:161530935 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_85466 0 0 1 3 161530932 161530946 mRNA hsa-miR-1271 MAP3K4 miRanda miRanda
14034 chr12 58121825 58121825 1 + C T UCEC 58121831 + 58121811 58121851 41 GCCTCAAAGTGCCACGTCTGACCCGTGCTGGACACGATCAG GCCTCAAAGTGCCATGTCTGACCCGTGCTGGACACGATCAG < 41bp 1 0.742263253373334 1 0.503097534179688 experiment 0.515473493253331 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 15 AGAP2 ENSG00000135439 CDS Human protein_coding chr12:58121831 chr12:58121825 synonymous SNV . 0 hm6A_associated_SNPs_85467 0 0 0 1 58121818 58121841 mRNA hsa-miR-214 LOC100130776 miRanda miRanda
14034 chr2 160604579 160604579 1 + G A UCEC 160604596 + 160604576 160604616 41 AGGGTTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGA AGGATTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGA < 41bp 1 0.56622849643325 1 0.962906241416931 experiment 0.8675430071335 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 4 MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604596 chr2:160604579 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_85497 0 0 1 1 160604572 160604592 mRNA hsa-miR-143 MARCH7 miRanda miRanda
14034 chr4 44691330 44691330 1 + A C UCEC 44691333 + 44691313 44691353 41 TCTAGACCAATCTGAATATAACAATCTGAAGAGTGCTATAG TCTAGACCAATCTGAATCTAACAATCTGAAGAGTGCTATAG < 41bp 1 0.786085905761376 1 0.162470281124115 experiment 0.427828188477248 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44691333 chr4:44691330 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_85504 0 0 1 2 44691319 44691339 mRNA hsa-miR-219-5p GUF1 miRanda miRanda
14034 chr4 44691330 44691330 1 + A C UCEC 44691333 + 44691313 44691353 41 TCTAGACCAATCTGAATATAACAATCTGAAGAGTGCTATAG TCTAGACCAATCTGAATCTAACAATCTGAAGAGTGCTATAG < 41bp 1 0.786085905761376 1 0.162470281124115 experiment 0.427828188477248 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 GUF1 ENSG00000151806 CDS Human protein_coding chr4:44691333 chr4:44691330 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_85504 0 0 1 2 44691308 44691331 mRNA hsa-miR-361-5p GUF1 miRanda miRanda
14034 chr3 56647651 56647651 1 + G T UCEC 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCGCATGAAGAAACAACTGGAGGAAGAGCAAAG < 41bp 1 0.587899131658046 1 0.882130980491638 experiment 0.824201736683907 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647651 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_85510 0 0 1 2 56647646 56647666 mRNA hsa-miR-199b-5p CCDC66 miRanda miRanda
14034 chr3 56647651 56647651 1 + G T UCEC 56647658 + 56647638 56647678 41 GAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAG GAAGAGAAGCGCATGAAGAAACAACTGGAGGAAGAGCAAAG < 41bp 1 0.587899131658046 1 0.882130980491638 experiment 0.824201736683907 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 14 CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647658 chr3:56647651 nonsynonymous SNV 0.996 2 hm6A_associated_SNPs_85510 0 0 1 2 56647644 56647667 mRNA hsa-miR-145 CCDC66 miRanda miRanda
14034 chr6 44122575 44122575 1 + C T UCEC 44122589 + 44122569 44122609 41 AGACTTCCAGTCTTGCGAGGACAGCCTCATAGAGAATGAGA AGACTTTCAGTCTTGCGAGGACAGCCTCATAGAGAATGAGA < 41bp 1 0.774947280078535 1 0.976846635341644 experiment 0.45010543984293 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122589 chr6:44122575 synonymous SNV . 0 hm6A_associated_SNPs_85556 0 0 1 2 44122551 44122575 mRNA hsa-miR-382 TMEM63B miRanda miRanda
14034 chr6 44122575 44122575 1 + C T UCEC 44122589 + 44122569 44122609 41 AGACTTCCAGTCTTGCGAGGACAGCCTCATAGAGAATGAGA AGACTTTCAGTCTTGCGAGGACAGCCTCATAGAGAATGAGA < 41bp 1 0.774947280078535 1 0.976846635341644 experiment 0.45010543984293 Functional Loss 31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 7 TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122589 chr6:44122575 synonymous SNV . 0 hm6A_associated_SNPs_85556 0 0 1 2 44122575 44122597 mRNA hsa-miR-485-5p TMEM63B miRanda miRanda
14034 chr20 21227189 21227189 1 + A G UCEC 21227183 + 21227163 21227203 41 TTTACGCCCCAGAAACCATAACACCGATGATTCTGATGATT TTTACGCCCCAGAAACCATAACACCGGTGATTCTGATGATT < 41bp 1 0.173594874447559 1 0.210817217826843 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21227183 chr20:21227189 . 0.257 0 hm6A_associated_SNPs_85562 0 0 1 2 21227181 21227201 mRNA hsa-miR-361-5p PLK1S1 miRanda miRanda
14034 chr20 21227189 21227189 1 + A G UCEC 21227183 + 21227163 21227203 41 TTTACGCCCCAGAAACCATAACACCGATGATTCTGATGATT TTTACGCCCCAGAAACCATAACACCGGTGATTCTGATGATT < 41bp 1 0.173594874447559 1 0.210817217826843 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 27 KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21227183 chr20:21227189 . 0.257 0 hm6A_associated_SNPs_85562 0 0 1 2 21227176 21227201 mRNA hsa-miR-383 PLK1S1 miRanda miRanda
14034 chr19 50183821 50183821 1 + C A UCEC 50183817 + 50183797 50183837 41 ATCCAAAGATTACTACTTTGACTCCTACGCACACTTTGGCA ATCCAAAGATTACTACTTTGACTCATACGCACACTTTGGCA < 41bp 1 0.613564004885185 1 0.823668360710144 experiment 0.772871990229631 Functional Loss 26593424;GSE73405;miCLIP;HepG2;Heat_shock 25 PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50183817 chr19:50183821 synonymous SNV . 0 hm6A_associated_SNPs_85576 0 0 1 1 50183809 50183830 mRNA hsa-miR-210 PRMT1 miRanda miRanda
14034 chr7 44839390 44839390 1 + G A UCEC 44839371 + 44839351 44839391 41 GGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGG GGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACAG < 41bp 1 0.360492070809096 1 0.694105267524719 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 40 PPIA ENSG00000196262 CDS Human protein_coding chr7:44839371 chr7:44839390 synonymous SNV . 0 hm6A_associated_SNPs_85588 0 0 1 3 44839373 44839394 mRNA hsa-miR-99a PPIA miRanda miRanda
14034 chr7 44839390 44839390 1 + G A UCEC 44839371 + 44839351 44839391 41 GGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGG GGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACAG < 41bp 1 0.360492070809096 1 0.694105267524719 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 40 PPIA ENSG00000196262 CDS Human protein_coding chr7:44839371 chr7:44839390 synonymous SNV . 0 hm6A_associated_SNPs_85588 0 0 1 3 44839373 44839394 mRNA hsa-miR-100 PPIA miRanda miRanda
14034 chr7 44839390 44839390 1 + G A UCEC 44839371 + 44839351 44839391 41 GGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGG GGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACAG < 41bp 1 0.360492070809096 1 0.694105267524719 experiment 1 Functional Loss 26121403;GSE63753;miCLIP;HEK293;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31328227;GSE128699;miCLIP;HCT116;Control|31548708;GSE125780;DART-seq;HEK293T;Control 40 PPIA ENSG00000196262 CDS Human protein_coding chr7:44839371 chr7:44839390 synonymous SNV . 0 hm6A_associated_SNPs_85588 0 0 1 3 44839373 44839394 mRNA hsa-miR-99b PPIA miRanda miRanda
14034 chr9 32425856 32425856 1 + A G UCEC 32425868 + 32425848 32425888 41 GGATTCCAAGTTGCTCCTGAACATCATAATGACCATAAGAC GGATTCCAGGTTGCTCCTGAACATCATAATGACCATAAGAC < 41bp 1 0.791886950378308 1 0.0317589044570923 experiment 0.416226099243384 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control 9 ACO1 ENSG00000122729 CDS Human protein_coding chr9:32425868 chr9:32425856 synonymous SNV . 0 hm6A_associated_SNPs_85662 0 0 1 1 32425840 32425864 mRNA hsa-miR-146b-5p ACO1 miRanda miRanda
14034 chr17 34163181 34163181 1 + G T UCS 34163182 + 34163162 34163202 41 AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTCTAC AACACAATCTTTGTGCAAGTACTTGGGGAGGGTGTGTCTAC Direct Loss 1 0.580170161819892 1 0.119885236024857 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 20 TAF15 ENSG00000172660 CDS Human other chr17:34163182 chr17:34163181 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85749 0 0 1 2 34163177 34163199 mRNA hsa-miR-362-3p TAF15 miRanda miRanda
14034 chr17 34163181 34163181 1 + G T UCS 34163182 + 34163162 34163202 41 AACACAATCTTTGTGCAAGGACTTGGGGAGGGTGTGTCTAC AACACAATCTTTGTGCAAGTACTTGGGGAGGGTGTGTCTAC Direct Loss 1 0.580170161819892 1 0.119885236024857 experiment 1 Functional Loss 28637692;GSE86336;m6A-CLIP-seq;HeLa;Control|31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout|31328227;GSE128699;miCLIP;HCT116;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout|31548708;GSE125780;DART-seq;HEK293T;Control 20 TAF15 ENSG00000172660 CDS Human other chr17:34163182 chr17:34163181 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85749 0 0 1 2 34163177 34163199 mRNA hsa-miR-329 TAF15 miRanda miRanda
14034 chr2 155306999 155306999 1 + T G UCS 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCCTACAAGGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.756331288010286 1 0.997027039527893 experiment 0.487337423979428 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306999 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85754 0 0 0 3 155306982 155307003 mRNA hsa-miR-33a GALNT13 miRanda miRanda
14034 chr2 155306999 155306999 1 + T G UCS 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCCTACAAGGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.756331288010286 1 0.997027039527893 experiment 0.487337423979428 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306999 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85754 0 0 0 3 155306991 155307012 mRNA hsa-miR-139-5p GALNT13 miRanda miRanda
14034 chr2 155306999 155306999 1 + T G UCS 155307005 + 155306985 155307025 41 AATGGTGCCTACAATGCAGGACTGTAGTGGAAGCAGATCCC AATGGTGCCTACAAGGCAGGACTGTAGTGGAAGCAGATCCC < 41bp 1 0.756331288010286 1 0.997027039527893 experiment 0.487337423979428 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31279658;GSE122948;miCLIP;HEK293T;PCIF1 Knockout 15 GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307005 chr2:155306999 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_85754 0 0 0 3 155306983 155307003 mRNA hsa-miR-33b GALNT13 miRanda miRanda
14034 chr20 36488328 36488328 1 + G A UCS 36488335 + 36488315 36488355 41 AGGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACC AGGAGAGATCATCAACAATGACACCGAGGAGGAGTTCTACC < 41bp 1 0.614291947091621 1 0.802999258041382 experiment 0.771416105816757 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 14 CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488335 chr20:36488328 nonsynonymous SNV 0.983 3 hm6A_associated_SNPs_85778 0 0 1 1 36488309 36488330 mRNA hsa-miR-433 CTNNBL1 miRanda miRanda
14034 chr15 51201024 51201024 1 + C A UCS 51201017 + 51200997 51201037 41 ACGCTGACGGCGCTGCCGGGACTCTTTCTGCAGAACCAGCC ACGCTGACGGCGCTGCCGGGACTCTTTATGCAGAACCAGCC < 41bp 1 0.298104823040193 1 0.995350480079651 experiment 1 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 28 AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51201017 chr15:51201024 nonsynonymous SNV 0.982 1 hm6A_associated_SNPs_85784 0 0 1 1 51201011 51201032 mRNA hsa-miR-544 AP4E1 miRanda miRanda
14034 chr18 13741541 13741541 1 + A G UCS 13741552 + 13741532 13741572 41 TGACCCACAAATGTGTTTTGACATCTGCAGTTGTCAGTTTG TGACCCACAGATGTGTTTTGACATCTGCAGTTGTCAGTTTG < 41bp 1 0.703853847826754 1 0.0309911668300629 experiment 0.592292304346492 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 RNMT ENSG00000101654 CDS Human protein_coding chr18:13741552 chr18:13741541 synonymous SNV . 0 hm6A_associated_SNPs_85794 0 0 1 1 13741521 13741542 mRNA hsa-miR-299-3p RNMT miRanda miRanda
14034 chr20 18462374 18462374 1 + G A UCS 18462376 + 18462356 18462396 41 ACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGC ACAGTTGGCAGTGTAGATAGACACATGAAACTGTACAGGGC < 41bp 1 0.682710327415466 1 0.543313086032867 experiment 0.634579345169069 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 19 POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462376 chr20:18462374 nonsynonymous SNV 0.977 2 hm6A_associated_SNPs_85795 0 0 1 1 18462374 18462395 mRNA hsa-miR-486-5p POLR3F miRanda miRanda
14034 chr11 13393792 13393792 1 + C T UCS 13393803 + 13393783 13393823 41 GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCA GGATGAAGATAACGAACCAGACAATGAGGGGTGTAACCTCA < 41bp 1 0.674082221435058 1 0.97416627407074 experiment 0.651835557129884 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 10 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13393803 chr11:13393792 synonymous SNV . 0 hm6A_associated_SNPs_85797 0 0 0 1 13393777 13393797 mRNA hsa-miR-187 ARNTL miRanda miRanda
14034 chr11 65270254 65270254 1 + G A UCS 65270249 + 65270229 65270269 41 TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTG TCCATTGGGGAATAAGCATAACCCTAAGATTCTTACTACTG < 41bp 1 0.0779690320581737 1 0.810073256492615 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270249 chr11:65270254 . 0.734 0 hm6A_associated_SNPs_85810 0 0 1 4 65270249 65270270 lncRNA hsa-miR-199a-3p MALAT1 miRanda starBase2
14034 chr11 65270254 65270254 1 + G A UCS 65270249 + 65270229 65270269 41 TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTG TCCATTGGGGAATAAGCATAACCCTAAGATTCTTACTACTG < 41bp 1 0.0779690320581737 1 0.810073256492615 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270249 chr11:65270254 . 0.734 0 hm6A_associated_SNPs_85810 0 0 1 4 65270249 65270270 lncRNA hsa-miR-199b-3p MALAT1 miRanda starBase2
14034 chr11 65270254 65270254 1 + G A UCS 65270249 + 65270229 65270269 41 TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTG TCCATTGGGGAATAAGCATAACCCTAAGATTCTTACTACTG < 41bp 1 0.0779690320581737 1 0.810073256492615 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270249 chr11:65270254 . 0.734 0 hm6A_associated_SNPs_85810 0 0 1 4 65270250 65270270 lncRNA hsa-miR-3129-5p MALAT1 miRanda starBase2
14034 chr11 65270254 65270254 1 + G A UCS 65270249 + 65270229 65270269 41 TCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTG TCCATTGGGGAATAAGCATAACCCTAAGATTCTTACTACTG < 41bp 1 0.0779690320581737 1 0.810073256492615 experiment 1 Functional Loss 26404942;GSE71154;m6A-CLIP-seq;CD8T;Control|26404942;GSE71154;m6A-CLIP-seq;A549;Control|31328227;GSE128699;miCLIP;HCT116;METTL5 Knockout 26 MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270249 chr11:65270254 . 0.734 0 hm6A_associated_SNPs_85810 0 0 1 4 65270239 65270260 lncRNA hsa-miR-216a-5p MALAT1 miRanda starBase2
14034 chr6 88317395 88317395 1 + G C UCS 88317398 + 88317378 88317418 41 TTATATTCCACAGATATGAAACATTTTTTGCAAAAGTTGAT TTATATTCCACAGATATCAAACATTTTTTGCAAAAGTTGAT < 41bp 1 0.489099203150509 1 0.0219534635543823 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88317398 chr6:88317395 nonsynonymous SNV 0.944 0 hm6A_associated_SNPs_85817 0 0 0 2 88317391 88317411 mRNA hsa-miR-19a ORC3L miRanda miRanda
14034 chr6 88317395 88317395 1 + G C UCS 88317398 + 88317378 88317418 41 TTATATTCCACAGATATGAAACATTTTTTGCAAAAGTTGAT TTATATTCCACAGATATCAAACATTTTTTGCAAAAGTTGAT < 41bp 1 0.489099203150509 1 0.0219534635543823 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 18 ORC3 ENSG00000135336 CDS Human protein_coding chr6:88317398 chr6:88317395 nonsynonymous SNV 0.944 0 hm6A_associated_SNPs_85817 0 0 0 2 88317391 88317411 mRNA hsa-miR-19b ORC3L miRanda miRanda
14034 chr12 18499635 18499635 1 + A G UCS 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTGCTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0673568477853933 1 0.0065651535987854 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 15 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499635 nonsynonymous SNV 0.851 2 hm6A_associated_SNPs_85836 0 0 0 5 18499629 18499649 mRNA hsa-miR-320a PIK3C2G miRanda miRanda
14034 chr12 18499635 18499635 1 + A G UCS 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTGCTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0673568477853933 1 0.0065651535987854 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 15 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499635 nonsynonymous SNV 0.851 2 hm6A_associated_SNPs_85836 0 0 0 5 18499614 18499638 mRNA hsa-miR-411 PIK3C2G miRanda miRanda
14034 chr12 18499635 18499635 1 + A G UCS 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTGCTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0673568477853933 1 0.0065651535987854 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 15 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499635 nonsynonymous SNV 0.851 2 hm6A_associated_SNPs_85836 0 0 0 5 18499629 18499649 mRNA hsa-miR-320b PIK3C2G miRanda miRanda
14034 chr12 18499635 18499635 1 + A G UCS 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTGCTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0673568477853933 1 0.0065651535987854 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 15 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499635 nonsynonymous SNV 0.851 2 hm6A_associated_SNPs_85836 0 0 0 5 18499631 18499649 mRNA hsa-miR-320c PIK3C2G miRanda miRanda
14034 chr12 18499635 18499635 1 + A G UCS 18499641 + 18499621 18499661 41 GCTAATCAATGTCTACTGTAACAGCTTTTATGCAGATTTTC GCTAATCAATGTCTGCTGTAACAGCTTTTATGCAGATTTTC < 41bp 1 0.0673568477853933 1 0.0065651535987854 experiment 1 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control 15 PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18499641 chr12:18499635 nonsynonymous SNV 0.851 2 hm6A_associated_SNPs_85836 0 0 0 5 18499631 18499649 mRNA hsa-miR-320d PIK3C2G miRanda miRanda
14034 chr15 25332840 25332840 1 + T A UCS 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCATGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.277796382633523 1 0.353705763816833 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332840 . . 0 hm6A_associated_SNPs_85852 0 0 1 6 25332819 25332840 mRNA hsa-miR-1 SNORD116-21 miRanda miRanda
14034 chr15 25332840 25332840 1 + T A UCS 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCATGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.277796382633523 1 0.353705763816833 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332840 . . 0 hm6A_associated_SNPs_85852 0 0 1 6 25332815 25332840 mRNA hsa-miR-206 SNORD116-21 miRanda miRanda
14034 chr15 25332840 25332840 1 + T A UCS 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCATGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.277796382633523 1 0.353705763816833 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332840 . . 0 hm6A_associated_SNPs_85852 0 0 1 6 25332821 25332840 mRNA hsa-miR-613 SNORD116-21 miRanda miRanda
14034 chr15 25332840 25332840 1 + T A UCS 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCATGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.277796382633523 1 0.353705763816833 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332840 . . 0 hm6A_associated_SNPs_85852 0 0 1 6 25332819 25332840 lncRNA hsa-miR-1-3p AC124312.3 miRanda starBase2
14034 chr15 25332840 25332840 1 + T A UCS 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCATGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.277796382633523 1 0.353705763816833 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332840 . . 0 hm6A_associated_SNPs_85852 0 0 1 6 25332815 25332840 lncRNA hsa-miR-206 AC124312.3 miRanda starBase2
14034 chr15 25332840 25332840 1 + T A UCS 25332852 + 25332832 25332872 41 TACATTCCTTGGAAAGCTGAACAAAATGAGTGAAAACTCTA TACATTCCATGGAAAGCTGAACAAAATGAGTGAAAACTCTA < 41bp 1 0.277796382633523 1 0.353705763816833 experiment 1 Functional Loss 31257032;GSE122961;MAZTER-seq;ESC;Control|31257032;GSE122961;MAZTER-seq;ESC;FTO Knockout 9 SNORD116-20 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25332852 chr15:25332840 . . 0 hm6A_associated_SNPs_85852 0 0 1 6 25332821 25332840 lncRNA hsa-miR-613 AC124312.3 miRanda starBase2
14034 chr8 23115933 23115933 1 + C A LAML 23115931 + 23115911 23115951 41 CACTGTTCAAGGCATCCTGGACCGGATCTATGCCTCCCAGA CACTGTTCAAGGCATCCTGGACAGGATCTATGCCTCCCAGA < 41bp 1 0.473985819930713 1 0.948734164237976 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 23 CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23115931 chr8:23115933 synonymous SNV . 0 hm6A_associated_SNPs_85910 0 0 1 1 23115925 23115945 mRNA hsa-miR-31 CHMP7 miRanda miRanda
14034 chr16 8906882 8906882 1 + A G LAML 8906887 + 8906867 8906907 41 TGTCTTTCCTGATGGATGGGACAAGAGATACTGTCTGCGAC TGTCTTTCCTGATGGGTGGGACAAGAGATACTGTCTGCGAC < 41bp 1 0.700148466796535 1 0.885991871356964 experiment 0.599703066406931 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 16 PMM2 ENSG00000140650 CDS Human protein_coding chr16:8906887 chr16:8906882 synonymous SNV . 0 hm6A_associated_SNPs_85916 0 0 1 1 8906882 8906901 mRNA hsa-miR-144 PMM2 miRanda miRanda
14034 chr7 98955993 98955993 1 + G A LAML 98955979 + 98955959 98955999 41 TCAGGGTCTCGACTCTGAAGACAGAGTTCCTGCCGCTCCTA TCAGGGTCTCGACTCTGAAGACAGAGTTCCTGCCACTCCTA < 41bp 1 0.71359578404705 1 0.0838353037834167 experiment 0.5728084319059 Functional Loss 31281898;GSE125240;m6A-REF-seq;liver;Control|31328227;GSE128699;miCLIP;HCT116;Control 35 ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98955979 chr7:98955993 synonymous SNV . 0 hm6A_associated_SNPs_85923 0 0 1 1 98955988 98956010 mRNA hsa-miR-425 ARPC1A miRanda miRanda
14034 chr2 217526685 217526685 1 + C T LAML 217526693 + 217526673 217526713 41 CCTGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC CCTGCACATCCCTAACTGTGACAAGCATGGCCTGTACAACC < 41bp 1 0.733853188444588 1 0.233417153358459 experiment 0.532293623110824 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 13 IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217526693 chr2:217526685 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_85955 0 0 1 2 217526673 217526694 mRNA hsa-miR-27a IGFBP2 miRanda miRanda
14034 chr2 217526685 217526685 1 + C T LAML 217526693 + 217526673 217526713 41 CCTGCACATCCCCAACTGTGACAAGCATGGCCTGTACAACC CCTGCACATCCCTAACTGTGACAAGCATGGCCTGTACAACC < 41bp 1 0.733853188444588 1 0.233417153358459 experiment 0.532293623110824 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 13 IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217526693 chr2:217526685 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_85955 0 0 1 2 217526673 217526694 mRNA hsa-miR-27b IGFBP2 miRanda miRanda
14034 chr5 70855984 70855984 1 + T A LAML 70855997 + 70855977 70856017 41 TGTCTGATAAGGAAGAAAGAACTGATGCTGCTCCTAAGTCT TGTCTGAAAAGGAAGAAAGAACTGATGCTGCTCCTAAGTCT < 41bp 1 0.539674681188076 1 0.997164845466614 experiment 0.920650637623847 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 8 BDP1 ENSG00000145734 CDS Human protein_coding chr5:70855997 chr5:70855984 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_85974 0 0 1 1 70855965 70855986 mRNA hsa-miR-361-5p BDP1 miRanda miRanda
14034 chr13 49710535 49710535 1 + G A LAML 49710521 + 49710501 49710541 41 GAGATGAACGATCTAGTAAAACATATGAACGTTTGCAGAAA GAGATGAACGATCTAGTAAAACATATGAACGTTTACAGAAA < 41bp 1 0.704248388548863 1 0.795977354049683 experiment 0.591503222902273 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 35 FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49710521 chr13:49710535 synonymous SNV . 0 hm6A_associated_SNPs_86004 0 0 1 1 49710519 49710541 mRNA hsa-miR-544 FNDC3A miRanda miRanda
14034 chr9 139983453 139983453 1 + C T LAML 139983435 + 139983415 139983455 41 GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTCAC GGCGGACACCGACCCTGAGAACTTACCTGAGATTTCGTTAC < 41bp 1 0.754607104606651 1 0.824173808097839 experiment 0.490785790786699 Functional Loss 25491922;GSE54921;PA-m6A-seq;HeLa;Control 39 MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983435 chr9:139983453 nonsynonymous SNV 0.012 0 hm6A_associated_SNPs_86010 0 0 1 1 139983449 139983457 mRNA hsa-miR-599 MAN1B1 miRanda miRanda
14034 chr20 37153485 37153485 1 + A G LAML 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCGGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT < 41bp 1 0.257079781046688 1 0.019104391336441 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153485 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86021 0 0 1 3 37153484 37153505 mRNA hsa-miR-185 RALGAPB miRanda miRanda
14034 chr20 37153485 37153485 1 + A G LAML 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCGGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT < 41bp 1 0.257079781046688 1 0.019104391336441 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153485 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86021 0 0 1 3 37153467 37153488 mRNA hsa-miR-193a-3p RALGAPB miRanda miRanda
14034 chr20 37153485 37153485 1 + A G LAML 37153498 + 37153478 37153518 41 CTTGGCCAGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT CTTGGCCGGCGTTATTCTAAACTCTCCTCCTTTGTTCTGCT < 41bp 1 0.257079781046688 1 0.019104391336441 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 8 RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153498 chr20:37153485 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86021 0 0 1 3 37153467 37153488 mRNA hsa-miR-193b RALGAPB miRanda miRanda
14034 chr17 26715527 26715527 1 + A G LAML 26715515 + 26715495 26715535 41 GCTATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATG GCTATCACCTGGAGCACTGGACAAGTGCATGCGAGACCATG < 41bp 1 0.70887393467193 1 0.952412784099579 experiment 0.58225213065614 Functional Loss 31281898;GSE125240;m6A-REF-seq;kidney;Control 33 SARM1 ENSG00000004139 CDS Human protein_coding chr17:26715515 chr17:26715527 nonsynonymous SNV 0.961 0 hm6A_associated_SNPs_86035 0 0 0 1 26715512 26715532 mRNA hsa-miR-431 SARM1 miRanda miRanda
14034 chr19 54647481 54647481 1 + A G LAML 54647463 + 54647443 54647483 41 GGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGA GGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGGGA < 41bp 1 0.727464130731498 1 0.964391231536865 experiment 0.545071738537004 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;Control|31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 39 CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54647463 chr19:54647481 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86041 0 0 1 1 54647480 54647485 mRNA hsa-miR-451 CNOT3 miRanda miRanda
14034 chrX 149905897 149905897 1 + A G LAML 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAGGCTTTGGACACAGGTTTGCACTGGTAAG < 41bp 1 0.513432789695376 1 0.861249923706055 experiment 0.973134420609247 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905897 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_86057 0 0 0 3 149905881 149905901 mRNA hsa-miR-21 MTMR1 miRanda miRanda
14034 chrX 149905897 149905897 1 + A G LAML 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAGGCTTTGGACACAGGTTTGCACTGGTAAG < 41bp 1 0.513432789695376 1 0.861249923706055 experiment 0.973134420609247 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905897 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_86057 0 0 0 3 149905894 149905920 mRNA hsa-miR-130a MTMR1 miRanda miRanda
14034 chrX 149905897 149905897 1 + A G LAML 149905905 + 149905885 149905925 41 AAGGAGTGGATAAGCTTTGGACACAGGTTTGCACTGGTAAG AAGGAGTGGATAGGCTTTGGACACAGGTTTGCACTGGTAAG < 41bp 1 0.513432789695376 1 0.861249923706055 experiment 0.973134420609247 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression 13 MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905905 chrX:149905897 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_86057 0 0 0 3 149905880 149905901 mRNA hsa-miR-590-5p MTMR1 miRanda miRanda
14034 chr3 186503745 186503745 1 + T C LAML 186503764 + 186503744 186503784 41 GTTCGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA GCTCGAAATGAAATGCAAAAACTGCAGGCTGAAGCACCACA < 41bp 1 0.360464578875704 1 0.942682862281799 experiment 1 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 2 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186503764 chr3:186503745 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86085 0 0 1 1 186503745 186503765 mRNA hsa-miR-129-5p EIF4A2 miRanda miRanda
14034 chr17 27185491 27185491 1 + T C LAML 27185500 + 27185480 27185520 41 CCCTAGTGTCCTGGTCATGAACAAGGTGAGCACTACCCACC CCCTAGTGTCCCGGTCATGAACAAGGTGAGCACTACCCACC < 41bp 1 0.653676984608061 1 0.710632085800171 experiment 0.692646030783878 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;AlKBH5 overexpression|31257032;GSE122961;MAZTER-seq;ESC;Control 12 ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27185500 chr17:27185491 nonsynonymous SNV 0.992 5 hm6A_associated_SNPs_86171 0 0 1 1 27185473 27185493 mRNA hsa-miR-873 ERAL1 miRanda miRanda
14034 chr5 76332466 76332466 1 + C T LAML 76332477 + 76332457 76332497 41 CAGAAGCGGCTGTATCACAGACTGGATTTAGTTATGATGAA CAGAAGCGGTTGTATCACAGACTGGATTTAGTTATGATGAA < 41bp 1 0.465856257696218 1 0.93703830242157 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;METTL3_depleted 10 AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332477 chr5:76332466 nonsynonymous SNV 0.974 5 hm6A_associated_SNPs_86173 0 0 1 1 76332461 76332483 mRNA hsa-miR-145 AGGF1 miRanda miRanda
14034 chr7 135309991 135309991 1 + G T LAML 135309985 + 135309965 135310005 41 GTGGCTTTTGTATCTTTCTAACAGTGGCTACTTGAAGGTCC GTGGCTTTTGTATCTTTCTAACAGTGTCTACTTGAAGGTCC < 41bp 1 0.690943399125892 1 0.772409200668335 experiment 0.618113201748216 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135309985 chr7:135309991 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86234 0 0 1 3 135309979 135310000 mRNA hsa-miR-26a NUP205 miRanda miRanda
14034 chr7 135309991 135309991 1 + G T LAML 135309985 + 135309965 135310005 41 GTGGCTTTTGTATCTTTCTAACAGTGGCTACTTGAAGGTCC GTGGCTTTTGTATCTTTCTAACAGTGTCTACTTGAAGGTCC < 41bp 1 0.690943399125892 1 0.772409200668335 experiment 0.618113201748216 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135309985 chr7:135309991 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86234 0 0 1 3 135309980 135310000 mRNA hsa-miR-26b NUP205 miRanda miRanda
14034 chr7 135309991 135309991 1 + G T LAML 135309985 + 135309965 135310005 41 GTGGCTTTTGTATCTTTCTAACAGTGGCTACTTGAAGGTCC GTGGCTTTTGTATCTTTCTAACAGTGTCTACTTGAAGGTCC < 41bp 1 0.690943399125892 1 0.772409200668335 experiment 0.618113201748216 Functional Loss 31279658;GSE122948;miCLIP;HEK293T;Control 27 NUP205 ENSG00000155561 CDS Human protein_coding chr7:135309985 chr7:135309991 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86234 0 0 1 3 135309984 135310000 mRNA hsa-miR-1297 NUP205 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808213 + 45808193 45808233 41 TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTTCCCAG TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTACCCAG < 41bp 1 0.279260228815729 1 0.0858397483825684 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808213 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86247 0 0 0 5 45808202 45808228 mRNA hsa-miR-181a TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808213 + 45808193 45808233 41 TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTTCCCAG TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTACCCAG < 41bp 1 0.279260228815729 1 0.0858397483825684 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808213 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86247 0 0 0 5 45808205 45808228 mRNA hsa-miR-181b TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808213 + 45808193 45808233 41 TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTTCCCAG TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTACCCAG < 41bp 1 0.279260228815729 1 0.0858397483825684 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808213 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86247 0 0 0 5 45808205 45808228 mRNA hsa-miR-181c TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808213 + 45808193 45808233 41 TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTTCCCAG TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTACCCAG < 41bp 1 0.279260228815729 1 0.0858397483825684 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808213 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86247 0 0 0 5 45808217 45808238 mRNA hsa-miR-370 TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808213 + 45808193 45808233 41 TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTTCCCAG TCTGGGAACCTTCACCGCTGACCTGTGTGAGATGTACCCAG < 41bp 1 0.279260228815729 1 0.0858397483825684 experiment 1 Functional Loss 31548708;GSE125780;DART-seq;HEK293T;Control 36 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808213 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86247 0 0 0 5 45808205 45808228 mRNA hsa-miR-181d TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808246 + 45808226 45808266 41 GTTCCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT GTACCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT < 41bp 1 0.706761407753799 1 0.0692737698554993 experiment 0.586477184492402 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808246 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86248 0 0 0 5 45808202 45808228 mRNA hsa-miR-181a TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808246 + 45808226 45808266 41 GTTCCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT GTACCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT < 41bp 1 0.706761407753799 1 0.0692737698554993 experiment 0.586477184492402 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808246 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86248 0 0 0 5 45808205 45808228 mRNA hsa-miR-181b TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808246 + 45808226 45808266 41 GTTCCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT GTACCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT < 41bp 1 0.706761407753799 1 0.0692737698554993 experiment 0.586477184492402 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808246 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86248 0 0 0 5 45808205 45808228 mRNA hsa-miR-181c TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808246 + 45808226 45808266 41 GTTCCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT GTACCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT < 41bp 1 0.706761407753799 1 0.0692737698554993 experiment 0.586477184492402 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808246 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86248 0 0 0 5 45808217 45808238 mRNA hsa-miR-370 TOE1 miRanda miRanda
14034 chr1 45808228 45808228 1 + T A LAML 45808246 + 45808226 45808266 41 GTTCCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT GTACCCAGCAGGCATTTATGACACCAAATATGCTGCTGAGT < 41bp 1 0.706761407753799 1 0.0692737698554993 experiment 0.586477184492402 Functional Loss 31257032;GSE122961;MAZTER-seq;HEK293T;FTO overexpression 3 TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808246 chr1:45808228 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86248 0 0 0 5 45808205 45808228 mRNA hsa-miR-181d TOE1 miRanda miRanda
14034 chr7 86794304 86794304 1 + T C LAML 86794307 + 86794287 86794327 41 AGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGG AGTAACAGTAGAAACTGCGAACTCTGTGACTTTGACTCAGG < 41bp 1 0.539753970667699 1 0.960138916969299 experiment 0.920492058664601 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794307 chr7:86794304 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86260 0 0 1 3 86794286 86794307 mRNA hsa-miR-27a DMTF1 miRanda miRanda
14034 chr7 86794304 86794304 1 + T C LAML 86794307 + 86794287 86794327 41 AGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGG AGTAACAGTAGAAACTGCGAACTCTGTGACTTTGACTCAGG < 41bp 1 0.539753970667699 1 0.960138916969299 experiment 0.920492058664601 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794307 chr7:86794304 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86260 0 0 1 3 86794301 86794319 mRNA hsa-miR-224 DMTF1 miRanda miRanda
14034 chr7 86794304 86794304 1 + T C LAML 86794307 + 86794287 86794327 41 AGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGG AGTAACAGTAGAAACTGCGAACTCTGTGACTTTGACTCAGG < 41bp 1 0.539753970667699 1 0.960138916969299 experiment 0.920492058664601 Functional Loss 31328227;GSE128699;miCLIP;HCT116;Control 18 DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794307 chr7:86794304 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86260 0 0 1 3 86794285 86794307 mRNA hsa-miR-27b DMTF1 miRanda miRanda
14034 chr3 50005559 50005559 1 + A G rs142672037 50005559 + 50005539 50005579 41 CAAAGACGGAACACAAGTAGACTTTAGAGGCCGAGGTTCAG CAAAGACGGAACACAAGTAGGCTTTAGAGGCCGAGGTTCAG Direct Loss 0.943898346117891 0 0.52185476 0.224945932626724 prediction 0.887796692235783 Functional Loss - 21 RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005559 chr3:50005559 nonsynonymous SNV 0.999 1 hm6A_associated_SNPs_86280 0 0 1 1 50005543 50005563 mRNA hsa-miR-224 RBM6 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751280 6751301 mRNA hsa-miR-17 TRIP10 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751280 6751301 mRNA hsa-miR-20a TRIP10 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751280 6751301 mRNA hsa-miR-93 TRIP10 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751280 6751301 mRNA hsa-miR-106a TRIP10 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751275 6751297 mRNA hsa-miR-153 TRIP10 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751282 6751301 mRNA hsa-miR-106b TRIP10 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751280 6751301 mRNA hsa-miR-20b TRIP10 miRanda miRanda
14034 chr19 6751288 6751288 1 + A G UCEC 6751288 + 6751268 6751308 41 GGGCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGA GGGCCACGGGGAGCCCCAGGGCCTATGCACTTTATTTCTGA Direct Loss 0.943483422774909 0 0.66096747 0.820694446563721 prediction 0.886966845549818 Functional Loss - 21 TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751288 chr19:6751288 nonsynonymous SNV 0.997 0 hm6A_associated_SNPs_86281 0 0 1 8 6751280 6751301 mRNA hsa-miR-519d TRIP10 miRanda miRanda
14034 chr20 25206208 25206208 1 + A G rs544628215 25206208 + 25206188 25206228 41 TCATTACATCGACTCCCTGAACAGACAGAAGAGTCCAGCCT TCATTACATCGACTCCCTGAGCAGACAGAAGAGTCCAGCCT Direct Loss 0.94140399020002 0 0.83092475 0.936039686203003 prediction 0.88280798040004 Functional Loss - 21 ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25206208 chr20:25206208 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_86283 0 0 1 2 25206205 25206226 mRNA hsa-miR-378 ENTPD6 miRanda miRanda
14034 chr20 25206208 25206208 1 + A G rs544628215 25206208 + 25206188 25206228 41 TCATTACATCGACTCCCTGAACAGACAGAAGAGTCCAGCCT TCATTACATCGACTCCCTGAGCAGACAGAAGAGTCCAGCCT Direct Loss 0.94140399020002 0 0.83092475 0.936039686203003 prediction 0.88280798040004 Functional Loss - 21 ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25206208 chr20:25206208 nonsynonymous SNV 0.998 0 hm6A_associated_SNPs_86283 0 0 1 2 25206204 25206226 mRNA hsa-miR-422a ENTPD6 miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594403 50594425 mRNA hsa-miR-17 KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594403 50594425 mRNA hsa-miR-20a KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594404 50594425 mRNA hsa-miR-93 KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594403 50594425 mRNA hsa-miR-106a KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594405 50594425 mRNA hsa-miR-106b KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594400 50594423 mRNA hsa-miR-301a KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594404 50594428 mRNA hsa-miR-340 KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594403 50594425 mRNA hsa-miR-20b KCNRG miRanda miRanda
14034 chr13 50594418 50594418 1 + A G UCEC 50594418 + 50594398 50594438 41 TGTCCTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCT TGTCCTCGGCTTACTGATTGGCACTTTATTAAAGGAAGGCT Direct Loss 0.940836185841502 0 0.26708305 0.693193316459656 prediction 0.881672371683004 Functional Loss - 21 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594418 chr13:50594418 nonsynonymous SNV 0.960 4 hm6A_associated_SNPs_86285 0 0 0 9 50594404 50594425 mRNA hsa-miR-519d KCNRG miRanda miRanda
14034 chr11 64011564 64011564 1 + A C rs568326806 64011564 + 64011544 64011584 41 CAGACTGTTCCAAAAAAAAAACAAAAAACAAAAACAAACAA CAGACTGTTCCAAAAAAAAACCAAAAAACAAAAACAAACAA Direct Loss 0.936619770536145 0 0.1624633 0.785739779472351 prediction 0.873239541072289 Functional Loss - 21 FKBP2 ENSG00000173486 UTR3 Human protein_coding chr11:64011564 chr11:64011564 . . 0 hm6A_associated_SNPs_86289 0 0 0 2 64011551 64011571 mRNA hsa-miR-129-5p FKBP2 miRanda miRanda
14034 chr11 64011564 64011564 1 + A C rs568326806 64011564 + 64011544 64011584 41 CAGACTGTTCCAAAAAAAAAACAAAAAACAAAAACAAACAA CAGACTGTTCCAAAAAAAAACCAAAAAACAAAAACAAACAA Direct Loss 0.936619770536145 0 0.1624633 0.785739779472351 prediction 0.873239541072289 Functional Loss - 21 FKBP2 ENSG00000173486 UTR3 Human protein_coding chr11:64011564 chr11:64011564 . . 0 hm6A_associated_SNPs_86289 0 0 0 2 64011558 64011578 mRNA hsa-miR-129-5p FKBP2 miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-let-7a CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-let-7b CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-let-7c CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208168 22208188 mRNA hsa-let-7d CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-let-7e CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-let-7f CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-miR-98 CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-let-7g CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208167 22208188 mRNA hsa-let-7i CMAS miRanda miRanda
14034 chr12 22208175 22208175 1 + A T COAD 22208175 + 22208155 22208195 41 AAGTTCTGAAGTTTCAAAAGACAGCTCTACCTCACTAGATG AAGTTCTGAAGTTTCAAAAGTCAGCTCTACCTCACTAGATG Direct Loss 0.934886757219677 0 0.81492066 0.686402320861816 prediction 0.869773514439354 Functional Loss - 21 CMAS ENSG00000111726 CDS Human protein_coding chr12:22208175 chr12:22208175 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86291 0 0 1 10 22208169 22208188 mRNA hsa-miR-202 CMAS miRanda miRanda
14034 chr12 32875406 32875406 1 + A G rs10844318 32875404 + 32875384 32875424 41 ATTGTTTACCAGAGTTGAAAACAAGAATAAATGTTCTAGCT ATTGTTTACCAGAGTTGAAAACGAGAATAAATGTTCTAGCT Direct Loss 0.819410478578461 0.484545159324079 0.061506808 0.397091209888458 prediction 1 Functional Loss - 23 DNM1L ENSG00000087470 CDS Human protein_coding chr12:32875404 chr12:32875406 synonymous SNV . 0 hm6A_associated_SNPs_86344 2 0 1 3 32875406 32875428 mRNA hsa-miR-424 DNM1L miRanda miRanda
14034 chr12 32875406 32875406 1 + A G rs10844318 32875404 + 32875384 32875424 41 ATTGTTTACCAGAGTTGAAAACAAGAATAAATGTTCTAGCT ATTGTTTACCAGAGTTGAAAACGAGAATAAATGTTCTAGCT Direct Loss 0.819410478578461 0.484545159324079 0.061506808 0.397091209888458 prediction 1 Functional Loss - 23 DNM1L ENSG00000087470 CDS Human protein_coding chr12:32875404 chr12:32875406 synonymous SNV . 0 hm6A_associated_SNPs_86344 2 0 1 3 32875406 32875428 mRNA hsa-miR-503 DNM1L miRanda miRanda
14034 chr12 32875406 32875406 1 + A G rs10844318 32875404 + 32875384 32875424 41 ATTGTTTACCAGAGTTGAAAACAAGAATAAATGTTCTAGCT ATTGTTTACCAGAGTTGAAAACGAGAATAAATGTTCTAGCT Direct Loss 0.819410478578461 0.484545159324079 0.061506808 0.397091209888458 prediction 1 Functional Loss - 23 DNM1L ENSG00000087470 CDS Human protein_coding chr12:32875404 chr12:32875406 synonymous SNV . 0 hm6A_associated_SNPs_86344 2 0 1 3 32875398 32875419 mRNA hsa-miR-543 DNM1L miRanda miRanda
14034 chr2 65309765 65309765 1 + A C rs200403553 65309763 + 65309743 65309783 41 CTCTATCTTGGCCTCTCTGGACATGCTGGCTGGCTGCACCC CTCTATCTTGGCCTCTCTGGACCTGCTGGCTGGCTGCACCC < 41bp 0.887208475211633 0.577192718160538 0.8233898 0.951228022575378 prediction 0.620031514102191 Functional Loss - 23 CEP68 ENSG00000011523 CDS Human protein_coding chr2:65309763 chr2:65309765 nonsynonymous SNV 0.762 0 hm6A_associated_SNPs_86348 0 0 1 1 65309748 65309772 mRNA hsa-miR-338-3p CEP68 miRanda miRanda
14034 chr6 43038472 43038472 1 + A C SKCM 43038470 + 43038450 43038490 41 AGATGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTGCC AGATGTGGCAAAACAGCTGAACCACCTGGCCCTCTTGTGCC < 41bp 0.802524530076559 0.337299858684342 0.15025404 0.402991980314255 prediction 0.605049060153118 Functional Loss - 23 KLC4 ENSG00000137171 CDS Human protein_coding chr6:43038470 chr6:43038472 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_86353 0 0 1 2 43038471 43038493 mRNA hsa-miR-96 KLC4 miRanda miRanda
14034 chr6 43038472 43038472 1 + A C SKCM 43038470 + 43038450 43038490 41 AGATGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTGCC AGATGTGGCAAAACAGCTGAACCACCTGGCCCTCTTGTGCC < 41bp 0.802524530076559 0.337299858684342 0.15025404 0.402991980314255 prediction 0.605049060153118 Functional Loss - 23 KLC4 ENSG00000137171 CDS Human protein_coding chr6:43038470 chr6:43038472 nonsynonymous SNV 1.000 5 hm6A_associated_SNPs_86353 0 0 1 2 43038472 43038493 mRNA hsa-miR-1271 KLC4 miRanda miRanda
14034 chr12 12247793 12247793 1 + A C rs61739220 12247791 + 12247771 12247811 41 TATTGACAACCACCCGATGAACAGGGTCCTGGGCTTTGGCA TATTGACAACCACCCGATGAACCGGGTCCTGGGCTTTGGCA < 41bp 0.775450646265381 0.385439262682071 0.58013403 0.758535385131836 prediction 0.550901292530761 Functional Loss - 23 BCL2L14 ENSG00000121380 CDS Human protein_coding chr12:12247791 chr12:12247793 synonymous SNV . 0 hm6A_associated_SNPs_86387 0 0 0 3 12247776 12247798 mRNA hsa-miR-10a BCL2L14 miRanda miRanda
14034 chr12 12247793 12247793 1 + A C rs61739220 12247791 + 12247771 12247811 41 TATTGACAACCACCCGATGAACAGGGTCCTGGGCTTTGGCA TATTGACAACCACCCGATGAACCGGGTCCTGGGCTTTGGCA < 41bp 0.775450646265381 0.385439262682071 0.58013403 0.758535385131836 prediction 0.550901292530761 Functional Loss - 23 BCL2L14 ENSG00000121380 CDS Human protein_coding chr12:12247791 chr12:12247793 synonymous SNV . 0 hm6A_associated_SNPs_86387 0 0 0 3 12247776 12247798 mRNA hsa-miR-10b BCL2L14 miRanda miRanda
14034 chr12 12247793 12247793 1 + A C rs61739220 12247791 + 12247771 12247811 41 TATTGACAACCACCCGATGAACAGGGTCCTGGGCTTTGGCA TATTGACAACCACCCGATGAACCGGGTCCTGGGCTTTGGCA < 41bp 0.775450646265381 0.385439262682071 0.58013403 0.758535385131836 prediction 0.550901292530761 Functional Loss - 23 BCL2L14 ENSG00000121380 CDS Human protein_coding chr12:12247791 chr12:12247793 synonymous SNV . 0 hm6A_associated_SNPs_86387 0 0 0 3 12247778 12247799 mRNA hsa-miR-504 BCL2L14 miRanda miRanda
14034 chr22 20099080 20099080 1 + T C rs149622945 20099078 + 20099058 20099098 41 CAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC CAGCTGTGAATAGTCATTTGACCGTGACTGTTGCCCTTAGC < 41bp 0.814549012826573 0.550843176939273 0.70162684 0.916791319847107 prediction 0.527411671774599 Functional Loss - 23 DGCR8 ENSG00000243762 ncRNA_intronic Human antisense chr22:20099078 chr22:20099080 . . 0 hm6A_associated_SNPs_86418 0 0 1 2 20099071 20099090 mRNA hsa-miR-212 DGCR8 miRanda miRanda
14034 chr22 20099080 20099080 1 + T C rs149622945 20099078 + 20099058 20099098 41 CAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC CAGCTGTGAATAGTCATTTGACCGTGACTGTTGCCCTTAGC < 41bp 0.814549012826573 0.550843176939273 0.70162684 0.916791319847107 prediction 0.527411671774599 Functional Loss - 23 DGCR8 ENSG00000243762 ncRNA_intronic Human antisense chr22:20099078 chr22:20099080 . . 0 hm6A_associated_SNPs_86418 0 0 1 2 20099070 20099090 mRNA hsa-miR-132 DGCR8 miRanda miRanda
14034 chr10 22606855 22606855 1 + A G LIHC 22606853 + 22606833 22606873 41 ATCGACCCAGTGGTTTTAAAACATTGTCATGCAGCAGCTGC ATCGACCCAGTGGTTTTAAAACGTTGTCATGCAGCAGCTGC Direct Loss 0.762937605007527 0.436494286247251 0.50193816 0.881243348121643 prediction 1 Functional Loss - 23 COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22606853 chr10:22606855 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_86421 0 0 0 1 22606839 22606862 mRNA hsa-miR-203 COMMD3 miRanda miRanda
14034 chr4 106157436 106157436 1 + T C UCEC 106157434 + 106157414 106157454 41 AAGGATCATTCTTTGGCCAGACTAAAGTGGAAGAATGTTTT AAGGATCATTCTTTGGCCAGACCAAAGTGGAAGAATGTTTT < 41bp 0.822481991817811 0.565357795978763 0.90124273 0.951579213142395 prediction 0.514248391678095 Functional Loss - 23 TET2 ENSG00000168769 CDS Human protein_coding chr4:106157434 chr4:106157436 synonymous SNV . 0 hm6A_associated_SNPs_86437 0 0 1 1 106157435 106157453 mRNA hsa-miR-543 TET2 miRanda miRanda
14034 chr3 16343327 16343327 1 + A G CESC 16343325 + 16343305 16343345 41 GAAATGGATATGAGATAGGAACAATAAAACTATTCTACAGT GAAATGGATATGAGATAGGAACGATAAAACTATTCTACAGT Direct Loss 0.751817641026605 0.50319293329527 0.14969617 0.467525064945221 prediction 1 Functional Loss - 23 OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16343325 chr3:16343327 synonymous SNV . 0 hm6A_associated_SNPs_86461 0 0 1 1 16343308 16343329 mRNA hsa-miR-375 OXNAD1 miRanda miRanda
14034 chr9 2652863 2652863 1 + A G UCEC 2652861 + 2652841 2652881 41 CATGAAAAGCATGAACTTTGACAATCCTGTGTACTTGAAAA CATGAAAAGCATGAACTTTGACGATCCTGTGTACTTGAAAA Direct Loss 0.772845013827523 0.526554892534701 0.37204093 0.906611323356628 prediction 1 Functional Loss - 23 VLDLR ENSG00000147852 CDS Human protein_coding chr9:2652861 chr9:2652863 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86475 0 0 0 3 2652859 2652879 mRNA hsa-miR-26a VLDLR miRanda miRanda
14034 chr9 2652863 2652863 1 + A G UCEC 2652861 + 2652841 2652881 41 CATGAAAAGCATGAACTTTGACAATCCTGTGTACTTGAAAA CATGAAAAGCATGAACTTTGACGATCCTGTGTACTTGAAAA Direct Loss 0.772845013827523 0.526554892534701 0.37204093 0.906611323356628 prediction 1 Functional Loss - 23 VLDLR ENSG00000147852 CDS Human protein_coding chr9:2652861 chr9:2652863 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86475 0 0 0 3 2652860 2652879 mRNA hsa-miR-26b VLDLR miRanda miRanda
14034 chr9 2652863 2652863 1 + A G UCEC 2652861 + 2652841 2652881 41 CATGAAAAGCATGAACTTTGACAATCCTGTGTACTTGAAAA CATGAAAAGCATGAACTTTGACGATCCTGTGTACTTGAAAA Direct Loss 0.772845013827523 0.526554892534701 0.37204093 0.906611323356628 prediction 1 Functional Loss - 23 VLDLR ENSG00000147852 CDS Human protein_coding chr9:2652861 chr9:2652863 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86475 0 0 0 3 2652847 2652867 mRNA hsa-miR-219-5p VLDLR miRanda miRanda
14034 chr13 50590025 50590025 1 + A G LUSC 50590023 + 50590003 50590043 41 TGTTTGGCTCTTGCAGCAAAACAATTGAGATGCTAACAGGG TGTTTGGCTCTTGCAGCAAAACGATTGAGATGCTAACAGGG Direct Loss 0.819788252493386 0.574595349904702 0.6846873 0.777672171592712 prediction 1 Functional Loss - 23 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50590023 chr13:50590025 synonymous SNV . 0 hm6A_associated_SNPs_86479 0 0 0 2 50590023 50590045 mRNA hsa-miR-204 TRIM13 miRanda miRanda
14034 chr13 50590025 50590025 1 + A G LUSC 50590023 + 50590003 50590043 41 TGTTTGGCTCTTGCAGCAAAACAATTGAGATGCTAACAGGG TGTTTGGCTCTTGCAGCAAAACGATTGAGATGCTAACAGGG Direct Loss 0.819788252493386 0.574595349904702 0.6846873 0.777672171592712 prediction 1 Functional Loss - 23 KCNRG ENSG00000198553 CDS Human protein_coding chr13:50590023 chr13:50590025 synonymous SNV . 0 hm6A_associated_SNPs_86479 0 0 0 2 50590023 50590045 mRNA hsa-miR-211 TRIM13 miRanda miRanda
14034 chr6 126320655 126320655 1 + A G BLCA 126320653 + 126320633 126320673 41 TCATACAGTGTCAAAAAGAGACACTTTATTGGAAATACAAG TCATACAGTGTCAAAAAGAGACGCTTTATTGGAAATACAAG Direct Loss 0.794944288680812 0.554142194610398 0.4514867 0.471216648817062 prediction 1 Functional Loss - 23 TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126320653 chr6:126320655 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_86493 0 0 1 5 126320636 126320660 mRNA hsa-miR-93 TRMT11 miRanda miRanda
14034 chr6 126320655 126320655 1 + A G BLCA 126320653 + 126320633 126320673 41 TCATACAGTGTCAAAAAGAGACACTTTATTGGAAATACAAG TCATACAGTGTCAAAAAGAGACGCTTTATTGGAAATACAAG Direct Loss 0.794944288680812 0.554142194610398 0.4514867 0.471216648817062 prediction 1 Functional Loss - 23 TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126320653 chr6:126320655 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_86493 0 0 1 5 126320636 126320660 mRNA hsa-miR-20b TRMT11 miRanda miRanda
14034 chr6 126320655 126320655 1 + A G BLCA 126320653 + 126320633 126320673 41 TCATACAGTGTCAAAAAGAGACACTTTATTGGAAATACAAG TCATACAGTGTCAAAAAGAGACGCTTTATTGGAAATACAAG Direct Loss 0.794944288680812 0.554142194610398 0.4514867 0.471216648817062 prediction 1 Functional Loss - 23 TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126320653 chr6:126320655 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_86493 0 0 1 5 126320640 126320659 mRNA hsa-miR-520e TRMT11 miRanda miRanda
14034 chr6 126320655 126320655 1 + A G BLCA 126320653 + 126320633 126320673 41 TCATACAGTGTCAAAAAGAGACACTTTATTGGAAATACAAG TCATACAGTGTCAAAAAGAGACGCTTTATTGGAAATACAAG Direct Loss 0.794944288680812 0.554142194610398 0.4514867 0.471216648817062 prediction 1 Functional Loss - 23 TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126320653 chr6:126320655 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_86493 0 0 1 5 126320640 126320659 mRNA hsa-miR-520b TRMT11 miRanda miRanda
14034 chr6 126320655 126320655 1 + A G BLCA 126320653 + 126320633 126320673 41 TCATACAGTGTCAAAAAGAGACACTTTATTGGAAATACAAG TCATACAGTGTCAAAAAGAGACGCTTTATTGGAAATACAAG Direct Loss 0.794944288680812 0.554142194610398 0.4514867 0.471216648817062 prediction 1 Functional Loss - 23 TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126320653 chr6:126320655 nonsynonymous SNV 0.991 2 hm6A_associated_SNPs_86493 0 0 1 5 126320639 126320659 mRNA hsa-miR-520c-3p TRMT11 miRanda miRanda
14034 chr18 33747150 33747150 1 + A G LIHC 33747148 + 33747128 33747168 41 GTCTTGTGATTGGAGTCCTGACAGCAAGTATTTCTTCACTG GTCTTGTGATTGGAGTCCTGACGGCAAGTATTTCTTCACTG Direct Loss 0.740566529692989 0.430645198196433 0.105258286 0.0402622520923615 prediction 1 Functional Loss - 23 ELP2 ENSG00000134759 CDS Human protein_coding chr18:33747148 chr18:33747150 nonsynonymous SNV 0.995 0 hm6A_associated_SNPs_86494 0 0 1 1 33747135 33747155 mRNA hsa-miR-599 ELP2 miRanda miRanda
14034 chr11 85988142 85988142 1 + A G PAAD 85988140 + 85988120 85988160 41 ATTTGATTACAGCCAGTGTGACATTTGGTACATGAGGTTTT ATTTGATTACAGCCAGTGTGACGTTTGGTACATGAGGTTTT Direct Loss 0.883734922574457 0.64604934380511 0.016700655 0.039674699306488 prediction 1 Functional Loss - 23 EED ENSG00000074266 CDS Human protein_coding chr11:85988140 chr11:85988142 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86503 0 0 1 1 85988116 85988142 mRNA hsa-miR-342-3p EED miRanda miRanda
14034 chr1 162782140 162782140 1 + T C STAD 162782138 + 162782118 162782158 41 TTTTATCAAAAGTTACTGGAACTGGAAAAGCACATTAGGGT TTTTATCAAAAGTTACTGGAACCGGAAAAGCACATTAGGGT < 41bp 0.729801619221824 0.421350441859508 0.13263005 0.625082790851593 prediction 0.459603238443648 Functional Loss - 23 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162782138 chr1:162782140 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_86528 0 0 0 4 162782133 162782152 mRNA hsa-miR-218 HSD17B7 miRanda miRanda
14034 chr1 162782140 162782140 1 + T C STAD 162782138 + 162782118 162782158 41 TTTTATCAAAAGTTACTGGAACTGGAAAAGCACATTAGGGT TTTTATCAAAAGTTACTGGAACCGGAAAAGCACATTAGGGT < 41bp 0.729801619221824 0.421350441859508 0.13263005 0.625082790851593 prediction 0.459603238443648 Functional Loss - 23 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162782138 chr1:162782140 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_86528 0 0 0 4 162782130 162782153 mRNA hsa-miR-135a HSD17B7 miRanda miRanda
14034 chr1 162782140 162782140 1 + T C STAD 162782138 + 162782118 162782158 41 TTTTATCAAAAGTTACTGGAACTGGAAAAGCACATTAGGGT TTTTATCAAAAGTTACTGGAACCGGAAAAGCACATTAGGGT < 41bp 0.729801619221824 0.421350441859508 0.13263005 0.625082790851593 prediction 0.459603238443648 Functional Loss - 23 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162782138 chr1:162782140 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_86528 0 0 0 4 162782125 162782144 mRNA hsa-miR-145 HSD17B7 miRanda miRanda
14034 chr1 162782140 162782140 1 + T C STAD 162782138 + 162782118 162782158 41 TTTTATCAAAAGTTACTGGAACTGGAAAAGCACATTAGGGT TTTTATCAAAAGTTACTGGAACCGGAAAAGCACATTAGGGT < 41bp 0.729801619221824 0.421350441859508 0.13263005 0.625082790851593 prediction 0.459603238443648 Functional Loss - 23 HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162782138 chr1:162782140 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_86528 0 0 0 4 162782130 162782153 mRNA hsa-miR-135b HSD17B7 miRanda miRanda
14034 chr1 184041983 184041983 1 + A C COAD 184041981 + 184041961 184042001 41 AATATTTCTCTTAGAAGATGACATCCATGTTTCCTGATGCT AATATTTCTCTTAGAAGATGACCTCCATGTTTCCTGATGCT < 41bp 0.729574224852654 0.255109138844906 0.2934593 0.20408633351326 prediction 0.459148449705308 Functional Loss - 23 TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184041981 chr1:184041983 nonsynonymous SNV 0.472 0 hm6A_associated_SNPs_86529 0 0 0 4 184041973 184041994 mRNA hsa-miR-494 TSEN15 miRanda miRanda
14034 chr1 184041983 184041983 1 + A C COAD 184041981 + 184041961 184042001 41 AATATTTCTCTTAGAAGATGACATCCATGTTTCCTGATGCT AATATTTCTCTTAGAAGATGACCTCCATGTTTCCTGATGCT < 41bp 0.729574224852654 0.255109138844906 0.2934593 0.20408633351326 prediction 0.459148449705308 Functional Loss - 23 TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184041981 chr1:184041983 nonsynonymous SNV 0.472 0 hm6A_associated_SNPs_86529 0 0 0 4 184041982 184041994 mRNA hsa-miR-494 TSEN15 miRanda miRanda
14034 chr1 184041983 184041983 1 + A C COAD 184041981 + 184041961 184042001 41 AATATTTCTCTTAGAAGATGACATCCATGTTTCCTGATGCT AATATTTCTCTTAGAAGATGACCTCCATGTTTCCTGATGCT < 41bp 0.729574224852654 0.255109138844906 0.2934593 0.20408633351326 prediction 0.459148449705308 Functional Loss - 23 TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184041981 chr1:184041983 nonsynonymous SNV 0.472 0 hm6A_associated_SNPs_86529 0 0 0 4 184041975 184041997 mRNA hsa-miR-873 TSEN15 miRanda miRanda
14034 chr1 184041983 184041983 1 + A C COAD 184041981 + 184041961 184042001 41 AATATTTCTCTTAGAAGATGACATCCATGTTTCCTGATGCT AATATTTCTCTTAGAAGATGACCTCCATGTTTCCTGATGCT < 41bp 0.729574224852654 0.255109138844906 0.2934593 0.20408633351326 prediction 0.459148449705308 Functional Loss - 23 TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184041981 chr1:184041983 nonsynonymous SNV 0.472 0 hm6A_associated_SNPs_86529 0 0 0 4 184041982 184041997 mRNA hsa-miR-873 TSEN15 miRanda miRanda
14034 chr22 44594538 44594538 1 + A G COAD 44594536 + 44594516 44594556 41 ATCTTACTCTTGCTGATTGGACAACTTGAAGGCTTCTTCCT ATCTTACTCTTGCTGATTGGACGACTTGAAGGCTTCTTCCT Direct Loss 0.843381651136555 0.61476012315496 0.032734692 0.00584650039672852 prediction 1 Functional Loss - 23 PARVG ENSG00000138964 CDS Human protein_coding chr22:44594536 chr22:44594538 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86539 0 0 0 1 44594522 44594543 mRNA hsa-miR-382 PARVG miRanda miRanda
14034 chr3 139067115 139067115 1 + A G UCEC 139067113 + 139067093 139067133 41 AAGATAAGATTTTGGAAGGAACAGAAACAACCAAATATGTG AAGATAAGATTTTGGAAGGAACGGAAACAACCAAATATGTG Direct Loss 0.771082104758615 0.542961824902168 0.11132774 0.124836087226868 prediction 1 Functional Loss - 23 MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139067113 chr3:139067115 synonymous SNV . 0 hm6A_associated_SNPs_86540 0 0 1 1 139067109 139067129 mRNA hsa-miR-9 MRPS22 miRanda miRanda
14034 chr2 47702290 47702290 1 + A G rs61756468 47702288 + 47702268 47702308 41 CCAGCCATTTTGGAGAAAGGACAAGGAAGAATTATATTAAA CCAGCCATTTTGGAGAAAGGACGAGGAAGAATTATATTAAA Direct Loss 0.801198959593893 0.575485145940782 0.13142157 0.830398499965668 prediction 1 Functional Loss - 23 MSH2 ENSG00000095002 CDS Human protein_coding chr2:47702288 chr2:47702290 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_86552 4 0 1 3 47702283 47702304 mRNA hsa-miR-374a MSH2 miRanda miRanda
14034 chr2 47702290 47702290 1 + A G rs61756468 47702288 + 47702268 47702308 41 CCAGCCATTTTGGAGAAAGGACAAGGAAGAATTATATTAAA CCAGCCATTTTGGAGAAAGGACGAGGAAGAATTATATTAAA Direct Loss 0.801198959593893 0.575485145940782 0.13142157 0.830398499965668 prediction 1 Functional Loss - 23 MSH2 ENSG00000095002 CDS Human protein_coding chr2:47702288 chr2:47702290 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_86552 4 0 1 3 47702285 47702305 mRNA hsa-miR-410 MSH2 miRanda miRanda
14034 chr2 47702290 47702290 1 + A G rs61756468 47702288 + 47702268 47702308 41 CCAGCCATTTTGGAGAAAGGACAAGGAAGAATTATATTAAA CCAGCCATTTTGGAGAAAGGACGAGGAAGAATTATATTAAA Direct Loss 0.801198959593893 0.575485145940782 0.13142157 0.830398499965668 prediction 1 Functional Loss - 23 MSH2 ENSG00000095002 CDS Human protein_coding chr2:47702288 chr2:47702290 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_86552 4 0 1 3 47702283 47702304 mRNA hsa-miR-374b MSH2 miRanda miRanda
14034 chr3 36484919 36484919 1 + A G SARC 36484917 + 36484897 36484937 41 TTTACGGAGCAAAAGTGCTGACAACTTCTTCCAGCGAACCA TTTACGGAGCAAAAGTGCTGACGACTTCTTCCAGCGAACCA Direct Loss 0.785135247461237 0.563704494793105 0.21627185 0.732102632522583 prediction 1 Functional Loss - 23 STAC ENSG00000144681 CDS Human protein_coding chr3:36484917 chr3:36484919 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86578 0 0 0 1 36484903 36484924 mRNA hsa-miR-382 STAC miRanda miRanda
14034 chr10 115489589 115489589 1 + T C rs4353229 115489587 + 115489567 115489607 41 TAATACATGCAACAGAAGTGACTTCTGGAGAAAGCTCATGG TAATACATGCAACAGAAGTGACCTCTGGAGAAAGCTCATGG < 41bp 0.850024546360226 0.632054126396243 0.32453388 0.391355991363525 prediction 0.435940839927966 Functional Loss - 23 CASP7 ENSG00000165806 UTR3 Human protein_coding chr10:115489587 chr10:115489589 . . 0 hm6A_associated_SNPs_86595 0 0 1 1 115489571 115489591 mRNA hsa-miR-224 CASP7 miRanda miRanda
14034 chr7 106842601 106842601 1 + A C rs187030164 106842599 + 106842579 106842619 41 TCACTGTAATGGTGCTATTAACAAACAGTCAACACCATTGT TCACTGTAATGGTGCTATTAACCAACAGTCAACACCATTGT < 41bp 0.71642982158306 0.238477844400157 0.021162957 0.0361424386501312 prediction 0.432859643166119 Functional Loss - 23 COG5;HBP1 ENSG00000105856;ENSG00000164597 UTR3 Human other chr7:106842599 chr7:106842601 . . 0 hm6A_associated_SNPs_86599 0 0 1 2 106842601 106842622 mRNA hsa-miR-381 HBP1 miRanda miRanda
14034 chr7 106842601 106842601 1 + A C rs187030164 106842599 + 106842579 106842619 41 TCACTGTAATGGTGCTATTAACAAACAGTCAACACCATTGT TCACTGTAATGGTGCTATTAACCAACAGTCAACACCATTGT < 41bp 0.71642982158306 0.238477844400157 0.021162957 0.0361424386501312 prediction 0.432859643166119 Functional Loss - 23 COG5;HBP1 ENSG00000105856;ENSG00000164597 UTR3 Human other chr7:106842599 chr7:106842601 . . 0 hm6A_associated_SNPs_86599 0 0 1 2 106842599 106842622 mRNA hsa-miR-300 HBP1 miRanda miRanda
14034 chr1 151139822 151139822 1 + A G rs113895594 151139820 + 151139800 151139840 41 AGGCTCCTCTGCTAACTCAGACACGACTTATCACCCAGAGT AGGCTCCTCTGCTAACTCAGACGCGACTTATCACCCAGAGT Direct Loss 0.754238463175961 0.538208994171352 0.041000813 0.656712412834167 prediction 1 Functional Loss - 23 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151139820 chr1:151139822 synonymous SNV . 0 hm6A_associated_SNPs_86604 0 0 1 3 151139804 151139825 mRNA hsa-miR-187 SCNM1 miRanda miRanda
14034 chr1 151139822 151139822 1 + A G rs113895594 151139820 + 151139800 151139840 41 AGGCTCCTCTGCTAACTCAGACACGACTTATCACCCAGAGT AGGCTCCTCTGCTAACTCAGACGCGACTTATCACCCAGAGT Direct Loss 0.754238463175961 0.538208994171352 0.041000813 0.656712412834167 prediction 1 Functional Loss - 23 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151139820 chr1:151139822 synonymous SNV . 0 hm6A_associated_SNPs_86604 0 0 1 3 151139818 151139840 mRNA hsa-miR-330-5p SCNM1 miRanda miRanda
14034 chr1 151139822 151139822 1 + A G rs113895594 151139820 + 151139800 151139840 41 AGGCTCCTCTGCTAACTCAGACACGACTTATCACCCAGAGT AGGCTCCTCTGCTAACTCAGACGCGACTTATCACCCAGAGT Direct Loss 0.754238463175961 0.538208994171352 0.041000813 0.656712412834167 prediction 1 Functional Loss - 23 SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151139820 chr1:151139822 synonymous SNV . 0 hm6A_associated_SNPs_86604 0 0 1 3 151139821 151139840 mRNA hsa-miR-326 SCNM1 miRanda miRanda
14034 chr10 74628507 74628507 1 + A G UCEC 74628505 + 74628485 74628525 41 CAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATAC CAACGCTGAATGATGTAAAGACGTTGGTCCAGCAACTATAC Direct Loss 0.81798464671549 0.603265078943884 0.5163123 0.906331300735474 prediction 1 Functional Loss - 23 MCU ENSG00000156026 CDS Human protein_coding chr10:74628505 chr10:74628507 synonymous SNV . 0 hm6A_associated_SNPs_86608 0 0 1 2 74628498 74628517 mRNA hsa-miR-378 CCDC109A miRanda miRanda
14034 chr10 74628507 74628507 1 + A G UCEC 74628505 + 74628485 74628525 41 CAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATAC CAACGCTGAATGATGTAAAGACGTTGGTCCAGCAACTATAC Direct Loss 0.81798464671549 0.603265078943884 0.5163123 0.906331300735474 prediction 1 Functional Loss - 23 MCU ENSG00000156026 CDS Human protein_coding chr10:74628505 chr10:74628507 synonymous SNV . 0 hm6A_associated_SNPs_86608 0 0 1 2 74628497 74628517 mRNA hsa-miR-422a CCDC109A miRanda miRanda
14034 chrX 41205779 41205779 1 + A G UCEC 41205777 + 41205757 41205797 41 GGTAGCAGCAAGAGGACTGGACATTTCAAATGTGAAACATG GGTAGCAGCAAGAGGACTGGACGTTTCAAATGTGAAACATG Direct Loss 0.789338021219553 0.576302987323086 0.9276102 0.992310404777527 prediction 1 Functional Loss - 23 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205777 chrX:41205779 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_86617 0 0 1 3 41205772 41205792 mRNA hsa-miR-23a DDX3X miRanda miRanda
14034 chrX 41205779 41205779 1 + A G UCEC 41205777 + 41205757 41205797 41 GGTAGCAGCAAGAGGACTGGACATTTCAAATGTGAAACATG GGTAGCAGCAAGAGGACTGGACGTTTCAAATGTGAAACATG Direct Loss 0.789338021219553 0.576302987323086 0.9276102 0.992310404777527 prediction 1 Functional Loss - 23 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205777 chrX:41205779 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_86617 0 0 1 3 41205765 41205785 mRNA hsa-miR-203 DDX3X miRanda miRanda
14034 chrX 41205779 41205779 1 + A G UCEC 41205777 + 41205757 41205797 41 GGTAGCAGCAAGAGGACTGGACATTTCAAATGTGAAACATG GGTAGCAGCAAGAGGACTGGACGTTTCAAATGTGAAACATG Direct Loss 0.789338021219553 0.576302987323086 0.9276102 0.992310404777527 prediction 1 Functional Loss - 23 DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205777 chrX:41205779 nonsynonymous SNV 0.999 2 hm6A_associated_SNPs_86617 0 0 1 3 41205772 41205792 mRNA hsa-miR-23b DDX3X miRanda miRanda
14034 chr14 89307828 89307828 1 + A G PRAD 89307826 + 89307806 89307846 41 ATTTATCTAGGCTGAATTTAACAAAGTATTCCCAGAAACCT ATTTATCTAGGCTGAATTTAACGAAGTATTCCCAGAAACCT Direct Loss 0.708822474747942 0.38049155757575 0.2715847 0.193295449018478 prediction 1 Functional Loss - 23 TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307826 chr14:89307828 synonymous SNV . 0 hm6A_associated_SNPs_86640 0 0 0 5 89307815 89307836 mRNA hsa-miR-200b TTC8 miRanda miRanda
14034 chr14 89307828 89307828 1 + A G PRAD 89307826 + 89307806 89307846 41 ATTTATCTAGGCTGAATTTAACAAAGTATTCCCAGAAACCT ATTTATCTAGGCTGAATTTAACGAAGTATTCCCAGAAACCT Direct Loss 0.708822474747942 0.38049155757575 0.2715847 0.193295449018478 prediction 1 Functional Loss - 23 TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307826 chr14:89307828 synonymous SNV . 0 hm6A_associated_SNPs_86640 0 0 0 5 89307814 89307836 mRNA hsa-miR-200c TTC8 miRanda miRanda
14034 chr14 89307828 89307828 1 + A G PRAD 89307826 + 89307806 89307846 41 ATTTATCTAGGCTGAATTTAACAAAGTATTCCCAGAAACCT ATTTATCTAGGCTGAATTTAACGAAGTATTCCCAGAAACCT Direct Loss 0.708822474747942 0.38049155757575 0.2715847 0.193295449018478 prediction 1 Functional Loss - 23 TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307826 chr14:89307828 synonymous SNV . 0 hm6A_associated_SNPs_86640 0 0 0 5 89307821 89307843 mRNA hsa-miR-330-5p TTC8 miRanda miRanda
14034 chr14 89307828 89307828 1 + A G PRAD 89307826 + 89307806 89307846 41 ATTTATCTAGGCTGAATTTAACAAAGTATTCCCAGAAACCT ATTTATCTAGGCTGAATTTAACGAAGTATTCCCAGAAACCT Direct Loss 0.708822474747942 0.38049155757575 0.2715847 0.193295449018478 prediction 1 Functional Loss - 23 TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307826 chr14:89307828 synonymous SNV . 0 hm6A_associated_SNPs_86640 0 0 0 5 89307824 89307843 mRNA hsa-miR-326 TTC8 miRanda miRanda
14034 chr14 89307828 89307828 1 + A G PRAD 89307826 + 89307806 89307846 41 ATTTATCTAGGCTGAATTTAACAAAGTATTCCCAGAAACCT ATTTATCTAGGCTGAATTTAACGAAGTATTCCCAGAAACCT Direct Loss 0.708822474747942 0.38049155757575 0.2715847 0.193295449018478 prediction 1 Functional Loss - 23 TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307826 chr14:89307828 synonymous SNV . 0 hm6A_associated_SNPs_86640 0 0 0 5 89307817 89307836 mRNA hsa-miR-429 TTC8 miRanda miRanda
14034 chr10 62547884 62547884 1 + T C SKCM 62547882 + 62547862 62547902 41 TAGAAGAGTTCTTCACAGAGACTTAAAACCTCAAAATCTCT TAGAAGAGTTCTTCACAGAGACCTAAAACCTCAAAATCTCT < 41bp 0.802519875650135 0.596288358146243 0.41831982 0.658003091812134 prediction 0.412463035007782 Functional Loss - 23 CDK1 ENSG00000170312 CDS Human protein_coding chr10:62547882 chr10:62547884 synonymous SNV . 0 hm6A_associated_SNPs_86653 0 0 1 1 62547883 62547905 mRNA hsa-miR-335 CDK1 miRanda miRanda
14034 chr2 149227571 149227571 1 + T C SKCM 149227569 + 149227549 149227589 41 AGTTCCTAAACCTGGACCTGACTTGCTAAGGAAGCAGGGTC AGTTCCTAAACCTGGACCTGACCTGCTAAGGAAGCAGGGTC < 41bp 0.706085592824262 0.472674980272944 0.8762296 0.938013732433319 prediction 0.412171185648523 Functional Loss - 23 MBD5 ENSG00000204406 CDS Human protein_coding chr2:149227569 chr2:149227571 synonymous SNV . 0 hm6A_associated_SNPs_86654 0 0 0 1 149227569 149227590 mRNA hsa-miR-504 MBD5 miRanda miRanda
14034 chr20 29628287 29628287 1 + A G LGG 29628285 + 29628265 29628305 41 TAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAA TAGATGCAATGAAGCAGGGGACGTAGAAGCAAAAAGTAAAA Direct Loss 0.704164894034561 0.459831119437051 0.30378658 0.690744459629059 prediction 1 Functional Loss - 23 FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29628285 chr20:29628287 nonsynonymous SNV 0.980 1 hm6A_associated_SNPs_86661 0 0 0 1 29628281 29628300 mRNA hsa-miR-129-5p FRG1B miRanda miRanda
14034 chr5 175935727 175935727 1 + T C rs147866492 175935725 + 175935705 175935745 41 ATGAGTGGAATCACCATCTGACTGCTGTCAATAAAATGTAT ATGAGTGGAATCACCATCTGACCGCTGTCAATAAAATGTAT < 41bp 0.703654400971589 0.451618579450027 0.25341058 0.415236234664917 prediction 0.407308801943178 Functional Loss - 23 FAF2 ENSG00000113194 UTR3 Human protein_coding chr5:175935725 chr5:175935727 . . 0 hm6A_associated_SNPs_86666 0 0 1 3 175935709 175935731 mRNA hsa-miR-15a FAF2 miRanda miRanda
14034 chr5 175935727 175935727 1 + T C rs147866492 175935725 + 175935705 175935745 41 ATGAGTGGAATCACCATCTGACTGCTGTCAATAAAATGTAT ATGAGTGGAATCACCATCTGACCGCTGTCAATAAAATGTAT < 41bp 0.703654400971589 0.451618579450027 0.25341058 0.415236234664917 prediction 0.407308801943178 Functional Loss - 23 FAF2 ENSG00000113194 UTR3 Human protein_coding chr5:175935725 chr5:175935727 . . 0 hm6A_associated_SNPs_86666 0 0 1 3 175935709 175935731 mRNA hsa-miR-15b FAF2 miRanda miRanda
14034 chr5 175935727 175935727 1 + T C rs147866492 175935725 + 175935705 175935745 41 ATGAGTGGAATCACCATCTGACTGCTGTCAATAAAATGTAT ATGAGTGGAATCACCATCTGACCGCTGTCAATAAAATGTAT < 41bp 0.703654400971589 0.451618579450027 0.25341058 0.415236234664917 prediction 0.407308801943178 Functional Loss - 23 FAF2 ENSG00000113194 UTR3 Human protein_coding chr5:175935725 chr5:175935727 . . 0 hm6A_associated_SNPs_86666 0 0 1 3 175935710 175935731 mRNA hsa-miR-497 FAF2 miRanda miRanda
14034 chr5 86672763 86672763 1 + A T LUAD 86672761 + 86672741 86672781 41 ATGTATGTGGACAAGACCGAACACTACTGGCCAGCATCCTA ATGTATGTGGACAAGACCGAACTCTACTGGCCAGCATCCTA < 41bp 0.700570459202789 0.392882314134023 0.60694456 0.92776882648468 prediction 0.401140918405577 Functional Loss - 23 RASA1 ENSG00000145715 CDS Human protein_coding chr5:86672761 chr5:86672763 synonymous SNV . 0 hm6A_associated_SNPs_86681 0 0 1 1 86672747 86672768 mRNA hsa-miR-142-3p RASA1 miRanda miRanda
14034 chr19 52794058 52794058 1 + G A STAD 52794058 + 52794038 52794078 41 TGTGGCAAAGAATTTAGTGGGCATTCAAGCCTCACCACCCA TGTGGCAAAGAATTTAGTGGACATTCAAGCCTCACCACCCA Direct Gain 0 0.978519758202833 0 0.999633550643921 prediction 0.957039516405666 Functional Gain - 21 ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52794058 chr19:52794058 synonymous SNV . 0 hm6A_associated_SNPs_86686 0 0 0 1 52794042 52794063 mRNA hsa-miR-365 ZNF766 miRanda miRanda
14034 chr6 36169034 36169034 1 + G A UCEC 36169034 + 36169014 36169054 41 GTTCTTGGAACCTATTGAGGGCATTGACAATATCCCGCCTG GTTCTTGGAACCTATTGAGGACATTGACAATATCCCGCCTG Direct Gain 0 0.977850273907944 0 0.989833414554596 prediction 0.955700547815888 Functional Gain - 21 BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36169034 chr6:36169034 nonsynonymous SNV 0.999 4 hm6A_associated_SNPs_86687 0 0 1 1 36169018 36169039 mRNA hsa-miR-365 BRPF3 miRanda miRanda
14034 chr19 11242133 11242133 1 + G A rs3826810 11242133 + 11242113 11242153 41 TCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCA TCATCTGGGAGGCAGAACAGACTTCGGACAGTGCCCATGCA Direct Gain 0 0.975096192727639 0 0.961342215538025 prediction 0.950192385455278 Functional Gain - 21 LDLR ENSG00000130164 CDS Human protein_coding chr19:11242133 chr19:11242133 nonsynonymous SNV 0.008 2 hm6A_associated_SNPs_86690 1 0 1 1 11242119 11242140 mRNA hsa-miR-615-3p LDLR miRanda miRanda
14034 chr19 14676607 14676607 1 + G A UCEC 14676607 + 14676587 14676627 41 GATGACCATCTGGGCCAAGGGCAAGCACCGCAGCTACCTGA GATGACCATCTGGGCCAAGGACAAGCACCGCAGCTACCTGA Direct Gain 0 0.957317591799923 0 0.960877537727356 prediction 0.914635183599845 Functional Gain - 21 TECR ENSG00000099797 CDS Human protein_coding chr19:14676607 chr19:14676607 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_86738 0 0 0 2 14676601 14676622 mRNA hsa-miR-22 TECR miRanda miRanda
14034 chr19 14676607 14676607 1 + G A UCEC 14676607 + 14676587 14676627 41 GATGACCATCTGGGCCAAGGGCAAGCACCGCAGCTACCTGA GATGACCATCTGGGCCAAGGACAAGCACCGCAGCTACCTGA Direct Gain 0 0.957317591799923 0 0.960877537727356 prediction 0.914635183599845 Functional Gain - 21 TECR ENSG00000099797 CDS Human protein_coding chr19:14676607 chr19:14676607 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_86738 0 0 0 2 14676592 14676610 mRNA hsa-miR-874 TECR miRanda miRanda
14034 chr21 38884680 38884680 1 + G A COAD 38884680 + 38884660 38884700 41 CAATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAACAT CAATCCCCGCCAAGAGACTGACATAGCTGGACATCCAACAT Direct Gain 0 0.957143733201092 0 0.999669313430786 prediction 0.914287466402183 Functional Gain - 21 DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38884680 chr21:38884680 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86739 0 0 1 1 38884667 38884690 mRNA hsa-miR-338-3p DYRK1A miRanda miRanda
14034 chr7 64292390 64292390 1 + G A GBM 64292390 + 64292370 64292410 41 CTATAAATGTGCACACTGTGGCAAAGCCTTTAAACAGTCCT CTATAAATGTGCACACTGTGACAAAGCCTTTAAACAGTCCT Direct Gain 0 0.954412021313713 0 0.984433054924011 prediction 0.908824042627426 Functional Gain - 21 ZNF138 ENSG00000197008 CDS Human protein_coding chr7:64292390 chr7:64292390 nonsynonymous SNV 0.103 3 hm6A_associated_SNPs_86747 0 0 0 1 64292370 64292390 mRNA hsa-miR-128 ZNF138 miRanda miRanda
14034 chr5 37064800 37064800 1 + G A COAD 37064800 + 37064780 37064820 41 GCTTCAGTGTTCAGTGGATGGCAGGCTCCTACAGTGGCTCC GCTTCAGTGTTCAGTGGATGACAGGCTCCTACAGTGGCTCC Direct Gain 0 0.946309960305695 0 0.99310165643692 prediction 0.892619920611391 Functional Gain - 21 NIPBL ENSG00000164190 CDS Human protein_coding chr5:37064800 chr5:37064800 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86790 0 0 1 1 37064785 37064807 mRNA hsa-miR-22 NIPBL miRanda miRanda
14034 chr5 53839018 53839018 1 + C A ACC 53839018 + 53838998 53839038 41 TTTAACTACAGGAGCTCTTACCAAAGTCAAGGAGAGTAGGC TTTAACTACAGGAGCTCTTAACAAAGTCAAGGAGAGTAGGC Direct Gain 0 0.946122807967987 0 0.651234865188599 prediction 0.892245615935974 Functional Gain - 21 SNX18 ENSG00000178996 CDS Human protein_coding chr5:53839018 chr5:53839018 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_86794 0 0 0 1 53839011 53839024 mRNA hsa-miR-9 SNX18 miRanda miRanda
14034 chr10 91498079 91498079 1 + G A DLBC 91498079 + 91498059 91498099 41 AAGGTGTTACTTGCTATAAGGCAAAAATAAAGGAACTTGAA AAGGTGTTACTTGCTATAAGACAAAAATAAAGGAACTTGAA Direct Gain 0 0.945605552015749 0 0.978873372077942 prediction 0.891211104031499 Functional Gain - 21 KIF20B ENSG00000138182 CDS Human protein_coding chr10:91498079 chr10:91498079 nonsynonymous SNV 0.988 1 hm6A_associated_SNPs_86797 0 0 1 1 91498066 91498086 mRNA hsa-miR-129-5p KIF20B miRanda miRanda
14034 chr15 40685764 40685764 1 + C A OV 40685764 + 40685744 40685784 41 AGTAAATGATTTAACAACAGCCCTTAAGGAAATGGAGCAGC AGTAAATGATTTAACAACAGACCTTAAGGAAATGGAGCAGC Direct Gain 0 0.941145278368851 0 0.849729061126709 prediction 0.882290556737701 Functional Gain - 21 KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40685764 chr15:40685764 nonsynonymous SNV 0.002 1 hm6A_associated_SNPs_86827 0 0 1 1 40685759 40685781 mRNA hsa-miR-136 C15orf23 miRanda miRanda
14034 chr6 83847966 83847966 1 + C A UCEC 83847966 + 83847946 83847986 41 CCCTATAGCTTTTGTAAATGCCATTTCAACTACTAGTGTAA CCCTATAGCTTTTGTAAATGACATTTCAACTACTAGTGTAA Direct Gain 0 0.939279753404941 0 0.811800241470337 prediction 0.878559506809883 Functional Gain - 21 DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83847966 chr6:83847966 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86843 0 0 1 1 83847950 83847974 mRNA hsa-miR-203 DOPEY1 miRanda miRanda
14034 chr10 5498963 5498963 1 + G A rs371529601 5498963 + 5498943 5498983 41 GAGACTTTGGTGTAGAGAAGGCTCTGTGTGTTAACTGATGG GAGACTTTGGTGTAGAGAAGACTCTGTGTGTTAACTGATGG Direct Gain 0 0.9381230106675 0 0.984911203384399 prediction 0.876246021335001 Functional Gain - 21 NET1 ENSG00000173848 UTR3 Human protein_coding chr10:5498963 chr10:5498963 . . 0 hm6A_associated_SNPs_86855 0 0 1 3 5498958 5498974 mRNA hsa-miR-362-3p NET1 miRanda miRanda
14034 chr10 5498963 5498963 1 + G A rs371529601 5498963 + 5498943 5498983 41 GAGACTTTGGTGTAGAGAAGGCTCTGTGTGTTAACTGATGG GAGACTTTGGTGTAGAGAAGACTCTGTGTGTTAACTGATGG Direct Gain 0 0.9381230106675 0 0.984911203384399 prediction 0.876246021335001 Functional Gain - 21 NET1 ENSG00000173848 UTR3 Human protein_coding chr10:5498963 chr10:5498963 . . 0 hm6A_associated_SNPs_86855 0 0 1 3 5498958 5498974 mRNA hsa-miR-377 NET1 miRanda miRanda
14034 chr10 5498963 5498963 1 + G A rs371529601 5498963 + 5498943 5498983 41 GAGACTTTGGTGTAGAGAAGGCTCTGTGTGTTAACTGATGG GAGACTTTGGTGTAGAGAAGACTCTGTGTGTTAACTGATGG Direct Gain 0 0.9381230106675 0 0.984911203384399 prediction 0.876246021335001 Functional Gain - 21 NET1 ENSG00000173848 UTR3 Human protein_coding chr10:5498963 chr10:5498963 . . 0 hm6A_associated_SNPs_86855 0 0 1 3 5498958 5498974 mRNA hsa-miR-329 NET1 miRanda miRanda
14034 chr8 25364894 25364894 1 + T A rs115541844 25364894 + 25364874 25364914 41 AAGGATTTAGAAAACGAAGGTCTTGTATGGATTTCACTTCC AAGGATTTAGAAAACGAAGGACTTGTATGGATTTCACTTCC Direct Gain 0 0.937885100313375 0 0.987568616867065 prediction 0.875770200626751 Functional Gain - 21 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364894 chr8:25364894 synonymous SNV . 0 hm6A_associated_SNPs_86856 0 0 1 2 25364880 25364902 mRNA hsa-miR-381 CDCA2 miRanda miRanda
14034 chr8 25364894 25364894 1 + T A rs115541844 25364894 + 25364874 25364914 41 AAGGATTTAGAAAACGAAGGTCTTGTATGGATTTCACTTCC AAGGATTTAGAAAACGAAGGACTTGTATGGATTTCACTTCC Direct Gain 0 0.937885100313375 0 0.987568616867065 prediction 0.875770200626751 Functional Gain - 21 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364894 chr8:25364894 synonymous SNV . 0 hm6A_associated_SNPs_86856 0 0 1 2 25364881 25364902 mRNA hsa-miR-300 CDCA2 miRanda miRanda
14034 chr11 6415546 6415546 1 + G A UCEC 6415546 + 6415526 6415566 41 CCGGGAGCCATACCGCACTGGCAGCTTCTCTACAGGGCTCG CCGGGAGCCATACCGCACTGACAGCTTCTCTACAGGGCTCG Direct Gain 0 0.93609505337618 0 0.845268845558167 prediction 0.87219010675236 Functional Gain - 21 SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415546 chr11:6415546 stopgain 0.821 1 hm6A_associated_SNPs_86872 0 0 1 1 6415531 6415552 mRNA hsa-miR-22 SMPD1 miRanda miRanda
14034 chrX 49370603 49370603 1 + G A SARC 49370603 + 49370583 49370623 41 TGTTTTGTTTCAGGTGAAGGGCAATCACAGTGTTAAAAGAA TGTTTTGTTTCAGGTGAAGGACAATCACAGTGTTAAAAGAA Direct Gain 0 0.933134085607743 0 0.815022826194763 prediction 0.866268171215486 Functional Gain - 21 GAGE1 ENSG00000205777 CDS Human protein_coding chrX:49370603 chrX:49370603 synonymous SNV . 0 hm6A_associated_SNPs_86906 0 0 1 2 49370596 49370617 mRNA hsa-miR-141 GAGE1 miRanda miRanda
14034 chrX 49370603 49370603 1 + G A SARC 49370603 + 49370583 49370623 41 TGTTTTGTTTCAGGTGAAGGGCAATCACAGTGTTAAAAGAA TGTTTTGTTTCAGGTGAAGGACAATCACAGTGTTAAAAGAA Direct Gain 0 0.933134085607743 0 0.815022826194763 prediction 0.866268171215486 Functional Gain - 21 GAGE1 ENSG00000205777 CDS Human protein_coding chrX:49370603 chrX:49370603 synonymous SNV . 0 hm6A_associated_SNPs_86906 0 0 1 2 49370596 49370617 mRNA hsa-miR-200a GAGE1 miRanda miRanda
14034 chr15 48434481 48434481 1 - C T UCEC 48434481 - 48434461 48434501 41 CATATAGAACTGATAATGTAGCAAGCCCCAAGTATGATAAT CATATAGAACTGATAATGTAACAAGCCCCAAGTATGATAAT Direct Gain 0 0.932558900793943 0 0.304429799318314 prediction 0.865117801587885 Functional Gain - 21 SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48434481 chr15:48434481 nonsynonymous SNV 0.945 0 hm6A_associated_SNPs_86911 0 0 1 2 48434479 48434501 mRNA hsa-miR-221 MYEF2 miRanda miRanda
14034 chr15 48434481 48434481 1 - C T UCEC 48434481 - 48434461 48434501 41 CATATAGAACTGATAATGTAGCAAGCCCCAAGTATGATAAT CATATAGAACTGATAATGTAACAAGCCCCAAGTATGATAAT Direct Gain 0 0.932558900793943 0 0.304429799318314 prediction 0.865117801587885 Functional Gain - 21 SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48434481 chr15:48434481 nonsynonymous SNV 0.945 0 hm6A_associated_SNPs_86911 0 0 1 2 48434479 48434500 mRNA hsa-miR-222 MYEF2 miRanda miRanda
14034 chr6 160169299 160169299 1 + T A LUAD 160169299 + 160169279 160169319 41 AACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAAAA AACAATGGTAGACCCAGCGAACAACTTGTTTTTCCTAAAAA Direct Gain 0 0.9322319956354 0 0.991431832313538 prediction 0.8644639912708 Functional Gain - 21 WTAP ENSG00000146457 CDS Human protein_coding chr6:160169299 chr6:160169299 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86912 0 0 0 1 160169286 160169306 mRNA hsa-miR-382 WTAP miRanda miRanda
14034 chr1 231488428 231488428 1 + G A GBM 231488428 + 231488408 231488448 41 ATATGTTCTAGGAGAAACAAGCAATTTACCTTCACCTGGGA ATATGTTCTAGGAGAAACAAACAATTTACCTTCACCTGGGA Direct Gain 0 0.931428087706559 0 0.771011888980865 prediction 0.862856175413118 Functional Gain - 21 SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488428 chr1:231488428 nonsynonymous SNV 0.064 0 hm6A_associated_SNPs_86916 0 0 1 1 231488425 231488446 mRNA hsa-miR-125a-3p C1orf124 miRanda miRanda
14034 chr5 37064928 37064928 1 + G A UCEC 37064928 + 37064908 37064948 41 GCTCTAACGAGTGCTAATAAGCTGACTAATAAAGTTGTTCA GCTCTAACGAGTGCTAATAAACTGACTAATAAAGTTGTTCA Direct Gain 0 0.930644703044369 0 0.997943937778473 prediction 0.861289406088738 Functional Gain - 21 NIPBL ENSG00000164190 CDS Human protein_coding chr5:37064928 chr5:37064928 synonymous SNV . 0 hm6A_associated_SNPs_86925 0 0 1 2 37064911 37064931 mRNA hsa-miR-21 NIPBL miRanda miRanda
14034 chr5 37064928 37064928 1 + G A UCEC 37064928 + 37064908 37064948 41 GCTCTAACGAGTGCTAATAAGCTGACTAATAAAGTTGTTCA GCTCTAACGAGTGCTAATAAACTGACTAATAAAGTTGTTCA Direct Gain 0 0.930644703044369 0 0.997943937778473 prediction 0.861289406088738 Functional Gain - 21 NIPBL ENSG00000164190 CDS Human protein_coding chr5:37064928 chr5:37064928 synonymous SNV . 0 hm6A_associated_SNPs_86925 0 0 1 2 37064910 37064931 mRNA hsa-miR-590-5p NIPBL miRanda miRanda
14034 chr18 48573531 48573531 1 + G A COAD 48573531 + 48573511 48573551 41 GTGAAACATTTGCAAAAAGAGCAATTGAAAGTTTGGTAAAG GTGAAACATTTGCAAAAAGAACAATTGAAAGTTTGGTAAAG Direct Gain 0 0.929850080175503 0 0.974689602851868 prediction 0.859700160351005 Functional Gain - 21 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48573531 chr18:48573531 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_86932 0 0 1 1 48573515 48573537 mRNA hsa-miR-137 SMAD4 miRanda miRanda
14034 chr1 55530321 55530321 1 + C A rs145806888 55530321 + 55530301 55530341 41 GGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGA GGCATGGTCGGGGGAGAGGGACAACAACTGTCCCTCCTTGA Direct Gain 0 0.926937532767681 0 0.66329038143158 prediction 0.853875065535363 Functional Gain - 21 PCSK9 ENSG00000169174 UTR3 Human protein_coding chr1:55530321 chr1:55530321 . . 0 hm6A_associated_SNPs_86962 0 0 1 1 55530304 55530324 mRNA hsa-miR-328 PCSK9 miRanda miRanda
14034 chr15 48063864 48063864 1 + G A CESC 48063864 + 48063844 48063884 41 GAGCAGCTACACCAGTAATGGCACTCTTCCTAGGACGGGAC GAGCAGCTACACCAGTAATGACACTCTTCCTAGGACGGGAC Direct Gain 0 0.92637326673735 0 0.991061687469482 prediction 0.852746533474699 Functional Gain - 21 SEMA6D ENSG00000137872 CDS Human protein_coding chr15:48063864 chr15:48063864 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86969 0 0 1 2 48063846 48063872 mRNA hsa-miR-18a SEMA6D miRanda miRanda
14034 chr15 48063864 48063864 1 + G A CESC 48063864 + 48063844 48063884 41 GAGCAGCTACACCAGTAATGGCACTCTTCCTAGGACGGGAC GAGCAGCTACACCAGTAATGACACTCTTCCTAGGACGGGAC Direct Gain 0 0.92637326673735 0 0.991061687469482 prediction 0.852746533474699 Functional Gain - 21 SEMA6D ENSG00000137872 CDS Human protein_coding chr15:48063864 chr15:48063864 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_86969 0 0 1 2 48063846 48063872 mRNA hsa-miR-18b SEMA6D miRanda miRanda
14034 chrX 149840130 149840130 1 + G A rs782192716 149840130 + 149840110 149840150 41 ATAGCTGACTTTCATTTGGGGCATTTGTAAAAAGTAGATTA ATAGCTGACTTTCATTTGGGACATTTGTAAAAAGTAGATTA Direct Gain 0 0.926361691017793 0 0.961867928504944 prediction 0.852723382035585 Functional Gain - 21 MTM1 ENSG00000171100 UTR3 Human protein_coding chrX:149840130 chrX:149840130 . . 0 hm6A_associated_SNPs_86971 0 0 1 2 149840111 149840135 mRNA hsa-miR-365 MTM1 miRanda miRanda
14034 chrX 149840130 149840130 1 + G A rs782192716 149840130 + 149840110 149840150 41 ATAGCTGACTTTCATTTGGGGCATTTGTAAAAAGTAGATTA ATAGCTGACTTTCATTTGGGACATTTGTAAAAAGTAGATTA Direct Gain 0 0.926361691017793 0 0.961867928504944 prediction 0.852723382035585 Functional Gain - 21 MTM1 ENSG00000171100 UTR3 Human protein_coding chrX:149840130 chrX:149840130 . . 0 hm6A_associated_SNPs_86971 0 0 1 2 149840128 149840150 mRNA hsa-miR-216b MTM1 miRanda miRanda
14034 chr4 84382282 84382282 1 - C T HNSC 84382282 - 84382262 84382302 41 AGGATCCTTGTATGTAACTGGCATAAACCCTGTAAAGAGAT AGGATCCTTGTATGTAACTGACATAAACCCTGTAAAGAGAT Direct Gain 0 0.923055358622022 0 0.00292259454727173 prediction 0.846110717244044 Functional Gain - 21 MRPS18C ENSG00000163319 CDS Human protein_coding chr4:84382282 chr4:84382282 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_87011 0 0 0 3 84382280 84382303 mRNA hsa-miR-145 FAM175A miRanda miRanda
14034 chr4 84382282 84382282 1 - C T HNSC 84382282 - 84382262 84382302 41 AGGATCCTTGTATGTAACTGGCATAAACCCTGTAAAGAGAT AGGATCCTTGTATGTAACTGACATAAACCCTGTAAAGAGAT Direct Gain 0 0.923055358622022 0 0.00292259454727173 prediction 0.846110717244044 Functional Gain - 21 MRPS18C ENSG00000163319 CDS Human protein_coding chr4:84382282 chr4:84382282 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_87011 0 0 0 3 84382271 84382292 mRNA hsa-miR-296-3p FAM175A miRanda miRanda
14034 chr4 84382282 84382282 1 - C T HNSC 84382282 - 84382262 84382302 41 AGGATCCTTGTATGTAACTGGCATAAACCCTGTAAAGAGAT AGGATCCTTGTATGTAACTGACATAAACCCTGTAAAGAGAT Direct Gain 0 0.923055358622022 0 0.00292259454727173 prediction 0.846110717244044 Functional Gain - 21 MRPS18C ENSG00000163319 CDS Human protein_coding chr4:84382282 chr4:84382282 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_87011 0 0 0 3 84382260 84382283 mRNA hsa-miR-216b FAM175A miRanda miRanda
14034 chr4 123814217 123814217 1 + G A HNSC 123814217 + 123814197 123814237 41 CATCTTAAGCATTCTTCCTGGCAAAAATTTATGGTGAATGA CATCTTAAGCATTCTTCCTGACAAAAATTTATGGTGAATGA Direct Gain 0 0.920620766448194 0 0.45081952214241 prediction 0.841241532896389 Functional Gain - 21 NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814217 chr4:123814217 synonymous SNV . 0 hm6A_associated_SNPs_87033 0 0 1 1 123814201 123814224 mRNA hsa-miR-129-5p FGF2 miRanda miRanda
14034 chr6 27806621 27806621 1 + G A UCEC 27806621 + 27806601 27806641 41 TATCTCGTCCAAGGCCATGGGCATCATGAACTCCTTCGTCA TATCTCGTCCAAGGCCATGGACATCATGAACTCCTTCGTCA Direct Gain 0 0.919312439587017 0 0.999885439872742 prediction 0.838624879174034 Functional Gain - 21 HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806621 chr6:27806621 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87056 0 0 1 3 27806606 27806630 mRNA hsa-miR-433 HIST1H2BN miRanda miRanda
14034 chr6 27806621 27806621 1 + G A UCEC 27806621 + 27806601 27806641 41 TATCTCGTCCAAGGCCATGGGCATCATGAACTCCTTCGTCA TATCTCGTCCAAGGCCATGGACATCATGAACTCCTTCGTCA Direct Gain 0 0.919312439587017 0 0.999885439872742 prediction 0.838624879174034 Functional Gain - 21 HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806621 chr6:27806621 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87056 0 0 1 3 27806606 27806628 mRNA hsa-miR-455-5p HIST1H2BN miRanda miRanda
14034 chr6 27806621 27806621 1 + G A UCEC 27806621 + 27806601 27806641 41 TATCTCGTCCAAGGCCATGGGCATCATGAACTCCTTCGTCA TATCTCGTCCAAGGCCATGGACATCATGAACTCCTTCGTCA Direct Gain 0 0.919312439587017 0 0.999885439872742 prediction 0.838624879174034 Functional Gain - 21 HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806621 chr6:27806621 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87056 0 0 1 3 27806597 27806624 mRNA hsa-miR-874 HIST1H2BN miRanda miRanda
14034 chr22 41626196 41626196 1 + G A UCEC 41626196 + 41626176 41626216 41 ACGTGGCCTCGCCCGACAAGGCTTCAAGTCCAGAGCTGCCT ACGTGGCCTCGCCCGACAAGACTTCAAGTCCAGAGCTGCCT Direct Gain 0 0.918535279869269 0 0.964093804359436 prediction 0.837070559738537 Functional Gain - 21 L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41626196 chr22:41626196 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_87070 0 0 1 2 41626189 41626209 mRNA hsa-miR-378 L3MBTL2 miRanda miRanda
14034 chr22 41626196 41626196 1 + G A UCEC 41626196 + 41626176 41626216 41 ACGTGGCCTCGCCCGACAAGGCTTCAAGTCCAGAGCTGCCT ACGTGGCCTCGCCCGACAAGACTTCAAGTCCAGAGCTGCCT Direct Gain 0 0.918535279869269 0 0.964093804359436 prediction 0.837070559738537 Functional Gain - 21 L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41626196 chr22:41626196 nonsynonymous SNV 0.000 0 hm6A_associated_SNPs_87070 0 0 1 2 41626188 41626209 mRNA hsa-miR-422a L3MBTL2 miRanda miRanda
14034 chr20 61598764 61598764 1 + C A COAD 61598764 + 61598744 61598784 41 TTGCCTGTTCAACCTTGTGGCCATCATCAGCAACCTGGGGC TTGCCTGTTCAACCTTGTGGACATCATCAGCAACCTGGGGC Direct Gain 0 0.917703311726989 0 0.971112251281738 prediction 0.835406623453979 Functional Gain - 21 SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61598764 chr20:61598764 nonsynonymous SNV 0.085 4 hm6A_associated_SNPs_87081 0 0 1 1 61598745 61598768 mRNA hsa-miR-183 SLC17A9 miRanda miRanda
14034 chr1 16785486 16785486 1 + G A UCEC 16785486 + 16785466 16785506 41 TCAGCTGGCCTGTGTTTGGGGCATGAATCTCTCCTCTCCTC TCAGCTGGCCTGTGTTTGGGACATGAATCTCTCCTCTCCTC Direct Gain 0 0.915743937684094 0 0.87410581111908 prediction 0.831487875368188 Functional Gain - 21 NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16785486 chr1:16785486 nonsynonymous SNV 0.012 1 hm6A_associated_SNPs_87106 0 0 1 1 16785479 16785500 mRNA hsa-miR-185 NECAP2 miRanda miRanda
14034 chr22 24125732 24125732 1 + C A UCEC 24125732 + 24125712 24125752 41 CTGCCAACACTTTCCTCTGACCATGGCTTGGATGCCCTCAG CTGCCAACACTTTCCTCTGAACATGGCTTGGATGCCCTCAG Direct Gain 0 0.913304793183747 0 0.178205698728561 prediction 0.826609586367495 Functional Gain - 21 MMP11 ENSG00000267954 CDS Human other chr22:24125732 chr22:24125732 nonsynonymous SNV 0.192 0 hm6A_associated_SNPs_87138 0 0 1 2 24125732 24125755 mRNA hsa-miR-125b MMP11 miRanda miRanda
14034 chr22 24125732 24125732 1 + C A UCEC 24125732 + 24125712 24125752 41 CTGCCAACACTTTCCTCTGACCATGGCTTGGATGCCCTCAG CTGCCAACACTTTCCTCTGAACATGGCTTGGATGCCCTCAG Direct Gain 0 0.913304793183747 0 0.178205698728561 prediction 0.826609586367495 Functional Gain - 21 MMP11 ENSG00000267954 CDS Human other chr22:24125732 chr22:24125732 nonsynonymous SNV 0.192 0 hm6A_associated_SNPs_87138 0 0 1 2 24125732 24125755 mRNA hsa-miR-125a-5p MMP11 miRanda miRanda
14034 chr6 149730846 149730846 1 + G A rs652921 149730846 + 149730826 149730866 41 GAACAGTGTGAGATGCCAAGGCATTTCTGAGCCAAATGGCC GAACAGTGTGAGATGCCAAGACATTTCTGAGCCAAATGGCC Direct Gain 0 0.911874279974505 0 0.93434351682663 prediction 0.82374855994901 Functional Gain - 21 TAB2 ENSG00000055208 CDS Human protein_coding chr6:149730846 chr6:149730846 synonymous SNV . 0 hm6A_associated_SNPs_87159 0 0 1 1 149730838 149730859 mRNA hsa-miR-24 TAB2 miRanda miRanda
14034 chr15 50793009 50793009 1 + C A rs75814199 50793009 + 50792989 50793029 41 TGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCACCAAAA TGCAGAAAGCAGTGTAGTGGACACCATCCAAATCACCAAAA Direct Gain 0 0.910577827543099 0 0.180838376283646 prediction 0.821155655086197 Functional Gain - 21 USP50 ENSG00000170236 CDS Human protein_coding chr15:50793009 chr15:50793009 nonsynonymous SNV 0.999 5 hm6A_associated_SNPs_87177 0 0 1 1 50792990 50793012 mRNA hsa-miR-328 USP8 miRanda miRanda
14034 chrX 24228401 24228401 1 + G A STAD 24228401 + 24228381 24228421 41 TCGAGAGGTTTTTTGAAAAGGCACATGAAAAACCATCCCGA TCGAGAGGTTTTTTGAAAAGACACATGAAAAACCATCCCGA Direct Gain 0 0.909017576936022 0 0.974602937698364 prediction 0.818035153872044 Functional Gain - 21 ZFX ENSG00000005889 CDS Human protein_coding chrX:24228401 chrX:24228401 synonymous SNV . 0 hm6A_associated_SNPs_87201 0 0 1 1 24228386 24228407 mRNA hsa-miR-455-5p ZFX miRanda miRanda
14034 chr1 171765659 171765659 1 + G A COAD 171765659 + 171765639 171765679 41 CTTGTGTGCCGAGACTTGGGGCTAAAAGACTCAGTGCTGGC CTTGTGTGCCGAGACTTGGGACTAAAAGACTCAGTGCTGGC Direct Gain 0 0.905107335158669 0 0.899383068084717 prediction 0.810214670317339 Functional Gain - 21 METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765659 chr1:171765659 synonymous SNV . 0 hm6A_associated_SNPs_87264 0 0 1 2 171765659 171765681 mRNA hsa-miR-15a METTL13 miRanda miRanda
14034 chr1 171765659 171765659 1 + G A COAD 171765659 + 171765639 171765679 41 CTTGTGTGCCGAGACTTGGGGCTAAAAGACTCAGTGCTGGC CTTGTGTGCCGAGACTTGGGACTAAAAGACTCAGTGCTGGC Direct Gain 0 0.905107335158669 0 0.899383068084717 prediction 0.810214670317339 Functional Gain - 21 METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765659 chr1:171765659 synonymous SNV . 0 hm6A_associated_SNPs_87264 0 0 1 2 171765659 171765681 mRNA hsa-miR-424 METTL13 miRanda miRanda
14034 chr14 60591492 60591492 1 + G A OV 60591492 + 60591472 60591512 41 GGTTGGTGATCATTCTACAGGCACTGTTCCTGAAAACGATC GGTTGGTGATCATTCTACAGACACTGTTCCTGAAAACGATC Direct Gain 0 0.901886629697277 0 0.933030247688293 prediction 0.803773259394555 Functional Gain - 21 PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591492 chr14:60591492 nonsynonymous SNV 0.149 0 hm6A_associated_SNPs_87306 0 0 0 1 60591485 60591504 mRNA hsa-miR-873 C14orf135 miRanda miRanda
14034 chrX 70525134 70525134 1 + G A rs759688759 70525134 + 70525114 70525154 41 TGGCCATGTGGCATCATTGAGCAGCAGGAGGCTGAAGGAGG TGGCCATGTGGCATCATTGAACAGCAGGAGGCTGAAGGAGG Direct Gain 0 0.901755839514358 0 0.00188654661178589 prediction 0.803511679028716 Functional Gain - 21 BCYRN1 ENSG00000147166 UTR3 Human protein_coding chrX:70525134 chrX:70525134 . . 0 hm6A_associated_SNPs_87308 0 0 1 1 70525119 70525142 mRNA hsa-miR-370 ITGB1BP2 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225712 mRNA hsa-miR-17 MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225712 mRNA hsa-miR-20a MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225712 mRNA hsa-miR-93 MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225712 mRNA hsa-miR-106a MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225691 114225712 mRNA hsa-miR-106b MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225711 mRNA hsa-miR-302a MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225690 114225711 mRNA hsa-miR-302b MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225690 114225711 mRNA hsa-miR-302c MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225690 114225711 mRNA hsa-miR-302d MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225690 114225711 mRNA hsa-miR-372 MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225711 mRNA hsa-miR-373 MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225712 mRNA hsa-miR-20b MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225691 114225711 mRNA hsa-miR-520e MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225690 114225711 mRNA hsa-miR-520a-3p MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225689 114225711 mRNA hsa-miR-520b MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225690 114225711 mRNA hsa-miR-520c-3p MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225691 114225712 mRNA hsa-miR-519d MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225690 114225711 mRNA hsa-miR-520d-3p MAGI3 miRanda miRanda
14034 chr1 114225705 114225705 1 + G A LUSC 114225705 + 114225685 114225725 41 CATTGTGCCTGAAAAGAAAAGCACTTTAAATGAAAATCAGC CATTGTGCCTGAAAAGAAAAACACTTTAAATGAAAATCAGC Direct Gain 0 0.900505411953247 0 0.935803055763245 prediction 0.801010823906495 Functional Gain - 21 MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114225705 chr1:114225705 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87330 0 0 0 19 114225695 114225711 mRNA hsa-miR-302e MAGI3 miRanda miRanda
14034 chr3 186506919 186506919 1 + G A SARC 186506919 + 186506899 186506939 41 CTTTTTCTTACACAGAATTGGCAGAGGGGGTCGATTTGGGA CTTTTTCTTACACAGAATTGACAGAGGGGGTCGATTTGGGA Direct Gain 0 0.89938456463999 0 0.94549173116684 prediction 0.798769129279981 Functional Gain - 21 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186506919 chr3:186506919 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_87347 0 0 1 2 186506914 186506941 mRNA hsa-miR-150 EIF4A2 miRanda miRanda
14034 chr3 186506919 186506919 1 + G A SARC 186506919 + 186506899 186506939 41 CTTTTTCTTACACAGAATTGGCAGAGGGGGTCGATTTGGGA CTTTTTCTTACACAGAATTGACAGAGGGGGTCGATTTGGGA Direct Gain 0 0.89938456463999 0 0.94549173116684 prediction 0.798769129279981 Functional Gain - 21 EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186506919 chr3:186506919 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_87347 0 0 1 2 186506912 186506932 mRNA hsa-miR-551b EIF4A2 miRanda miRanda
14034 chr9 130453129 130453129 1 + G A OV 130453129 + 130453109 130453149 41 TAAAACAGATGAAGAAATAAGCAGTTAAAAAAATAAGTCGC TAAAACAGATGAAGAAATAAACAGTTAAAAAAATAAGTCGC Direct Gain 0 0.898993047711145 0 0.989497542381287 prediction 0.79798609542229 Functional Gain - 21 STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130453129 chr9:130453129 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87355 0 0 0 2 130453111 130453132 mRNA hsa-miR-21 STXBP1 miRanda miRanda
14034 chr9 130453129 130453129 1 + G A OV 130453129 + 130453109 130453149 41 TAAAACAGATGAAGAAATAAGCAGTTAAAAAAATAAGTCGC TAAAACAGATGAAGAAATAAACAGTTAAAAAAATAAGTCGC Direct Gain 0 0.898993047711145 0 0.989497542381287 prediction 0.79798609542229 Functional Gain - 21 STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130453129 chr9:130453129 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87355 0 0 0 2 130453111 130453132 mRNA hsa-miR-590-5p STXBP1 miRanda miRanda
14034 chr5 10264804 10264804 1 + G A OV 10264804 + 10264784 10264824 41 TGTCATAGAAACCTTGATTGGCAAAAAGCAACAGATATCTC TGTCATAGAAACCTTGATTGACAAAAAGCAACAGATATCTC Direct Gain 0 0.898679467124315 0 0.945986986160278 prediction 0.79735893424863 Functional Gain - 21 CCT5 ENSG00000150753 CDS Human protein_coding chr5:10264804 chr5:10264804 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_87362 0 0 1 1 10264790 10264811 mRNA hsa-miR-129-5p CCT5 miRanda miRanda
14034 chr12 56113369 56113369 1 + G A UCEC 56113369 + 56113349 56113389 41 CTGGAATATGTCTACAAAGGGCAGCTGCAGTCTGCCCCTTC CTGGAATATGTCTACAAAGGACAGCTGCAGTCTGCCCCTTC Direct Gain 0 0.898116084352887 0 0.768054068088531 prediction 0.796232168705775 Functional Gain - 21 BLOC1S1 ENSG00000135441 CDS Human protein_coding chr12:56113369 chr12:56113369 synonymous SNV . 0 hm6A_associated_SNPs_87374 0 0 1 1 56113354 56113375 mRNA hsa-miR-22 BLOC1S1 miRanda miRanda
14034 chr3 38565820 38565820 1 + G A BLCA 38565820 + 38565800 38565840 41 GAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAG GAAGAACTCAAAGCTAAGGAACAGTCAGGAACCCAGATAAG Direct Gain 0 0.897999071277654 0 0.992421567440033 prediction 0.795998142555308 Functional Gain - 21 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565820 chr3:38565820 synonymous SNV . 0 hm6A_associated_SNPs_87376 0 0 1 2 38565811 38565838 mRNA hsa-miR-330-5p EXOG miRanda miRanda
14034 chr3 38565820 38565820 1 + G A BLCA 38565820 + 38565800 38565840 41 GAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAG GAAGAACTCAAAGCTAAGGAACAGTCAGGAACCCAGATAAG Direct Gain 0 0.897999071277654 0 0.992421567440033 prediction 0.795998142555308 Functional Gain - 21 EXOG ENSG00000157036 CDS Human protein_coding chr3:38565820 chr3:38565820 synonymous SNV . 0 hm6A_associated_SNPs_87376 0 0 1 2 38565818 38565838 mRNA hsa-miR-326 EXOG miRanda miRanda
14034 chrX 115590299 115590299 1 + C A rs2011162 115590299 + 115590279 115590319 41 GTGAATCTCTTAATTCTCAGCCATGTGCTTATTATATTTCT GTGAATCTCTTAATTCTCAGACATGTGCTTATTATATTTCT Direct Gain 0 0.895946743995993 0 0.123881667852402 prediction 0.791893487991985 Functional Gain - 21 SLC6A14 ENSG00000087916 UTR3 Human other chrX:115590299 chrX:115590299 . . 0 hm6A_associated_SNPs_87413 0 0 0 2 115590289 115590315 mRNA hsa-miR-374a SLC6A14 miRanda miRanda
14034 chrX 115590299 115590299 1 + C A rs2011162 115590299 + 115590279 115590319 41 GTGAATCTCTTAATTCTCAGCCATGTGCTTATTATATTTCT GTGAATCTCTTAATTCTCAGACATGTGCTTATTATATTTCT Direct Gain 0 0.895946743995993 0 0.123881667852402 prediction 0.791893487991985 Functional Gain - 21 SLC6A14 ENSG00000087916 UTR3 Human other chrX:115590299 chrX:115590299 . . 0 hm6A_associated_SNPs_87413 0 0 0 2 115590292 115590315 mRNA hsa-miR-374b SLC6A14 miRanda miRanda
14034 chr17 71204484 71204484 1 - A T STAD 71204484 - 71204464 71204504 41 AGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCC AGGAGCCAGGAACTGTCGGGACACCAGCTGTGGAGCGTGCC Direct Gain 0 0.895719914107183 0 0.946721315383911 prediction 0.791439828214366 Functional Gain - 21 COG1 ENSG00000166685 CDS Human protein_coding chr17:71204484 chr17:71204484 nonsynonymous SNV 0.847 2 hm6A_associated_SNPs_87417 0 0 1 1 71204476 71204496 mRNA hsa-miR-138 FAM104A miRanda miRanda
14034 chr1 236708123 236708123 1 + G A UCEC 236708123 + 236708103 236708143 41 ACCCACGCCTGAATATTAAAGCATTTGTAAGAAATTCTTTT ACCCACGCCTGAATATTAAAACATTTGTAAGAAATTCTTTT Direct Gain 0 0.895609458120269 0 0.34482878446579 prediction 0.791218916240538 Functional Gain - 21 LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236708123 chr1:236708123 nonsynonymous SNV 0.991 1 hm6A_associated_SNPs_87422 0 0 1 1 236708123 236708143 mRNA hsa-miR-186 LGALS8 miRanda miRanda
14034 chr10 35500694 35500694 1 + C A rs143874488 35500694 + 35500674 35500714 41 GCTTATAGAGGAACTTGAAACCTTGAAAGACATTTGTTCTC GCTTATAGAGGAACTTGAAAACTTGAAAGACATTTGTTCTC Direct Gain 0 0.894240795776495 0 0.995973587036133 prediction 0.788481591552989 Functional Gain - 21 CREM ENSG00000095794 CDS Human protein_coding chr10:35500694 chr10:35500694 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_87447 0 0 0 2 35500694 35500715 mRNA hsa-miR-146a CREM miRanda miRanda
14034 chr10 35500694 35500694 1 + C A rs143874488 35500694 + 35500674 35500714 41 GCTTATAGAGGAACTTGAAACCTTGAAAGACATTTGTTCTC GCTTATAGAGGAACTTGAAAACTTGAAAGACATTTGTTCTC Direct Gain 0 0.894240795776495 0 0.995973587036133 prediction 0.788481591552989 Functional Gain - 21 CREM ENSG00000095794 CDS Human protein_coding chr10:35500694 chr10:35500694 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_87447 0 0 0 2 35500694 35500715 mRNA hsa-miR-146b-5p CREM miRanda miRanda
14034 chr3 52283817 52283817 1 + G A COAD 52283817 + 52283797 52283837 41 GCACAGTCAGGGCCAAGAGAGCAGTGACCACTGAGGATTCA GCACAGTCAGGGCCAAGAGAACAGTGACCACTGAGGATTCA Direct Gain 0 0.892024247785348 0 0.613252818584442 prediction 0.784048495570696 Functional Gain - 21 PPM1M ENSG00000164088 CDS Human protein_coding chr3:52283817 chr3:52283817 nonsynonymous SNV 0.736 0 hm6A_associated_SNPs_87485 0 0 1 1 52283815 52283836 mRNA hsa-miR-216a PPM1M miRanda miRanda
14034 chr3 50005477 50005477 1 + G A UCEC 50005477 + 50005457 50005497 41 TATCAGATTTGGATTTTAGGGCCAGAGAACAGTCCCGTTCT TATCAGATTTGGATTTTAGGACCAGAGAACAGTCCCGTTCT Direct Gain 0 0.8920106336118 0 0.0200696289539337 prediction 0.784021267223601 Functional Gain - 21 RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005477 chr3:50005477 nonsynonymous SNV 0.993 0 hm6A_associated_SNPs_87486 0 0 1 1 50005460 50005481 mRNA hsa-miR-328 RBM6 miRanda miRanda
14034 chr11 117282579 117282579 1 + G A PRAD 117282579 + 117282559 117282599 41 GGGCAGCACCACCTTTCAGGGCATAATTGAGGCCAACCGGA GGGCAGCACCACCTTTCAGGACATAATTGAGGCCAACCGGA Direct Gain 0 0.88944886258598 0 0.908688485622406 prediction 0.778897725171959 Functional Gain - 21 CEP164 ENSG00000110274 CDS Human protein_coding chr11:117282579 chr11:117282579 nonsynonymous SNV 0.067 0 hm6A_associated_SNPs_87534 0 0 1 1 117282561 117282582 mRNA hsa-miR-874 CEP164 miRanda miRanda
14034 chr17 37814673 37814673 1 + G A UCEC 37814673 + 37814653 37814693 41 CACAGCTGCTCAGCAAAGGGGCATTTGGCTACCTGCTCCCC CACAGCTGCTCAGCAAAGGGACATTTGGCTACCTGCTCCCC Direct Gain 0 0.885359874721958 0 0.36414098739624 prediction 0.770719749443915 Functional Gain - 21 STARD3 ENSG00000131748 CDS Human protein_coding chr17:37814673 chr17:37814673 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_87618 0 0 1 2 37814658 37814678 mRNA hsa-miR-365 STARD3 miRanda miRanda
14034 chr17 37814673 37814673 1 + G A UCEC 37814673 + 37814653 37814693 41 CACAGCTGCTCAGCAAAGGGGCATTTGGCTACCTGCTCCCC CACAGCTGCTCAGCAAAGGGACATTTGGCTACCTGCTCCCC Direct Gain 0 0.885359874721958 0 0.36414098739624 prediction 0.770719749443915 Functional Gain - 21 STARD3 ENSG00000131748 CDS Human protein_coding chr17:37814673 chr17:37814673 nonsynonymous SNV 0.997 1 hm6A_associated_SNPs_87618 0 0 1 2 37814657 37814678 mRNA hsa-miR-365 STARD3 miRanda miRanda
14034 chr19 38795579 38795579 1 + G A UCEC 38795579 + 38795559 38795599 41 GAAGGGCAAGAAGGAGAAGGGCAAGAAGAAGGAGGCTCCCC GAAGGGCAAGAAGGAGAAGGACAAGAAGAAGGAGGCTCCCC Direct Gain 0 0.884030774751933 0 0.999259293079376 prediction 0.768061549503866 Functional Gain - 21 C19orf33 ENSG00000167644 CDS Human protein_coding chr19:38795579 chr19:38795579 nonsynonymous SNV 0.074 1 hm6A_associated_SNPs_87653 0 0 0 1 38795579 38795602 mRNA hsa-miR-491-5p C19orf33 miRanda miRanda
14034 chr10 99217037 99217037 1 + G A rs116233774 99217037 + 99217017 99217057 41 GATCTTGGCTTCTCAACAGGGCAAAGATACCAGGCCTGCTG GATCTTGGCTTCTCAACAGGACAAAGATACCAGGCCTGCTG Direct Gain 0 0.88386823013514 0 0.850772261619568 prediction 0.767736460270281 Functional Gain - 21 ZDHHC16 ENSG00000171307 UTR3 Human protein_coding chr10:99217037 chr10:99217037 . . 0 hm6A_associated_SNPs_87660 0 0 1 2 99217037 99217058 mRNA hsa-miR-214 ZDHHC16 miRanda miRanda
14034 chr10 99217037 99217037 1 + G A rs116233774 99217037 + 99217017 99217057 41 GATCTTGGCTTCTCAACAGGGCAAAGATACCAGGCCTGCTG GATCTTGGCTTCTCAACAGGACAAAGATACCAGGCCTGCTG Direct Gain 0 0.88386823013514 0 0.850772261619568 prediction 0.767736460270281 Functional Gain - 21 ZDHHC16 ENSG00000171307 UTR3 Human protein_coding chr10:99217037 chr10:99217037 . . 0 hm6A_associated_SNPs_87660 0 0 1 2 99217021 99217040 mRNA hsa-miR-874 ZDHHC16 miRanda miRanda
14034 chr12 3048872 3048872 1 + G A rs572835351 3048872 + 3048852 3048892 41 ATATAAAACACACACGAAGAGCAATAGTTTGCCCCTTTTGG ATATAAAACACACACGAAGAACAATAGTTTGCCCCTTTTGG Direct Gain 0 0.883298912301284 0 0.205007702112198 prediction 0.766597824602567 Functional Gain - 21 TULP3 ENSG00000078246 UTR3 Human protein_coding chr12:3048872 chr12:3048872 . . 0 hm6A_associated_SNPs_87665 0 0 0 1 3048856 3048878 mRNA hsa-miR-137 TULP3 miRanda miRanda
14034 chr7 99631909 99631909 1 + C A rs150542330 99631909 + 99631889 99631929 41 GGAGGGAAAAAGAAATACAGCCTCAACAGATTAAAAAACAA GGAGGGAAAAAGAAATACAGACTCAACAGATTAAAAAACAA Direct Gain 0 0.881707043735487 0 0.995466947555542 prediction 0.763414087470974 Functional Gain - 21 ZKSCAN1 ENSG00000106261 UTR3 Human protein_coding chr7:99631909 chr7:99631909 . . 0 hm6A_associated_SNPs_87702 0 0 1 1 99631892 99631913 mRNA hsa-miR-485-5p ZKSCAN1 miRanda miRanda
14034 chr10 75561174 75561174 1 + G A PAAD 75561174 + 75561154 75561194 41 CTTCTGCCTGACGCCCATGGGCATGATGCAGTTCAACGACA CTTCTGCCTGACGCCCATGGACATGATGCAGTTCAACGACA Direct Gain 0 0.881048739645123 0 0.999584138393402 prediction 0.762097479290245 Functional Gain - 21 ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75561174 chr10:75561174 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_87715 0 0 1 1 75561166 75561186 mRNA hsa-miR-217 KIAA0913 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106202 mRNA hsa-miR-17 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106202 mRNA hsa-miR-20a GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106180 70106202 mRNA hsa-miR-93 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106202 mRNA hsa-miR-106a GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106183 70106202 mRNA hsa-miR-106b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106201 mRNA hsa-miR-302a GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106201 mRNA hsa-miR-302b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106201 mRNA hsa-miR-302c GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106201 mRNA hsa-miR-302d GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106179 70106201 mRNA hsa-miR-372 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106179 70106201 mRNA hsa-miR-373 GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106202 mRNA hsa-miR-20b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106201 mRNA hsa-miR-520e GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106179 70106201 mRNA hsa-miR-520a-3p GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106201 mRNA hsa-miR-520b GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106180 70106201 mRNA hsa-miR-520c-3p GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106181 70106202 mRNA hsa-miR-519d GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106180 70106201 mRNA hsa-miR-520d-3p GMCL1 miRanda miRanda
14034 chr2 70106195 70106195 1 + G A rs182145762 70106195 + 70106175 70106215 41 TTCATCAGTTGGAAACAGTAGCACTTTGAAAACTTTTTAGG TTCATCAGTTGGAAACAGTAACACTTTGAAAACTTTTTAGG Direct Gain 0 0.880502339421313 0 0.917261064052582 prediction 0.761004678842626 Functional Gain - 21 GMCL1 ENSG00000087338 UTR3 Human protein_coding chr2:70106195 chr2:70106195 . . 0 hm6A_associated_SNPs_87724 0 0 1 19 70106185 70106201 mRNA hsa-miR-302e GMCL1 miRanda miRanda
14034 chr2 135926271 135926271 1 + C A KIRC 135926271 + 135926251 135926291 41 CTCCCTACTCCAAAGCTCTGCCTCAGCGGATGTACAGTGTT CTCCCTACTCCAAAGCTCTGACTCAGCGGATGTACAGTGTT Direct Gain 0 0.878763311568005 0 0.96116715669632 prediction 0.75752662313601 Functional Gain - 21 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135926271 chr2:135926271 nonsynonymous SNV 0.808 3 hm6A_associated_SNPs_87760 0 0 1 2 135926271 135926292 mRNA hsa-miR-141 RAB3GAP1 miRanda miRanda
14034 chr2 135926271 135926271 1 + C A KIRC 135926271 + 135926251 135926291 41 CTCCCTACTCCAAAGCTCTGCCTCAGCGGATGTACAGTGTT CTCCCTACTCCAAAGCTCTGACTCAGCGGATGTACAGTGTT Direct Gain 0 0.878763311568005 0 0.96116715669632 prediction 0.75752662313601 Functional Gain - 21 RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135926271 chr2:135926271 nonsynonymous SNV 0.808 3 hm6A_associated_SNPs_87760 0 0 1 2 135926271 135926292 mRNA hsa-miR-200a RAB3GAP1 miRanda miRanda
14034 chr12 7023099 7023099 1 + G A UCEC 7023099 + 7023079 7023119 41 ACCTGATCAGACTCCCAGGGGCAGCCACCACATGTATGACA ACCTGATCAGACTCCCAGGGACAGCCACCACATGTATGACA Direct Gain 0 0.878264373510454 0 0.7149298787117 prediction 0.756528747020907 Functional Gain - 21 LRRC23 ENSG00000010626 CDS Human protein_coding chr12:7023099 chr12:7023099 nonsynonymous SNV 0.000 1 hm6A_associated_SNPs_87770 0 0 1 1 7023097 7023119 mRNA hsa-miR-505 LRRC23 miRanda miRanda
14034 chr8 67086758 67086758 1 + G A LUSC 67086758 + 67086738 67086778 41 GGCTGCAGCTCCAGCGAGTGGCAGTGGAGCTGATTCTGAGC GGCTGCAGCTCCAGCGAGTGACAGTGGAGCTGATTCTGAGC Direct Gain 0 0.876125425171723 0 0.76433002948761 prediction 0.752250850343446 Functional Gain - 21 TRIM55 ENSG00000147573 CDS Human protein_coding chr8:67086758 chr8:67086758 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_87824 0 0 0 2 67086758 67086780 mRNA hsa-miR-24 TRIM55 miRanda miRanda
14034 chr8 67086758 67086758 1 + G A LUSC 67086758 + 67086738 67086778 41 GGCTGCAGCTCCAGCGAGTGGCAGTGGAGCTGATTCTGAGC GGCTGCAGCTCCAGCGAGTGACAGTGGAGCTGATTCTGAGC Direct Gain 0 0.876125425171723 0 0.76433002948761 prediction 0.752250850343446 Functional Gain - 21 TRIM55 ENSG00000147573 CDS Human protein_coding chr8:67086758 chr8:67086758 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_87824 0 0 0 2 67086757 67086782 mRNA hsa-miR-149 TRIM55 miRanda miRanda
14034 chr6 84669608 84669608 1 + T A rs373672482 84669608 + 84669588 84669628 41 TACAGCATAATGAAGAGCTGTCATTGTCCTTTATTCAACTA TACAGCATAATGAAGAGCTGACATTGTCCTTTATTCAACTA Direct Gain 0 0.875405787990311 0 0.605452954769135 prediction 0.750811575980621 Functional Gain - 21 CYB5R4 ENSG00000065615 UTR3 Human protein_coding chr6:84669608 chr6:84669608 . . 0 hm6A_associated_SNPs_87840 0 0 1 2 84669599 84669623 mRNA hsa-miR-340 CYB5R4 miRanda miRanda
14034 chr6 84669608 84669608 1 + T A rs373672482 84669608 + 84669588 84669628 41 TACAGCATAATGAAGAGCTGTCATTGTCCTTTATTCAACTA TACAGCATAATGAAGAGCTGACATTGTCCTTTATTCAACTA Direct Gain 0 0.875405787990311 0 0.605452954769135 prediction 0.750811575980621 Functional Gain - 21 CYB5R4 ENSG00000065615 UTR3 Human protein_coding chr6:84669608 chr6:84669608 . . 0 hm6A_associated_SNPs_87840 0 0 1 2 84669608 84669628 mRNA hsa-miR-653 CYB5R4 miRanda miRanda
14034 chr22 24125826 24125826 1 + G A UCEC 24125826 + 24125806 24125846 41 TTTGTGGCTGTGGGCACCAGGCATGGGACTGAGCCCATGTC TTTGTGGCTGTGGGCACCAGACATGGGACTGAGCCCATGTC Direct Gain 0 0.871918876095445 0 0.261528432369232 prediction 0.74383775219089 Functional Gain - 21 MMP11 ENSG00000267954 CDS Human other chr22:24125826 chr22:24125826 nonsynonymous SNV 0.016 0 hm6A_associated_SNPs_87920 0 0 1 1 24125820 24125841 mRNA hsa-miR-24 MMP11 miRanda miRanda
14034 chr1 150445761 150445761 1 + G A UCEC 150445761 + 150445741 150445781 41 CAGGCCACCTTTTGCTAGGGGCCCTCCGTTCTTTGCACCAA CAGGCCACCTTTTGCTAGGGACCCTCCGTTCTTTGCACCAA Direct Gain 0 0.871408970053839 0 0.896861970424652 prediction 0.742817940107678 Functional Gain - 21 RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445761 chr1:150445761 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87931 0 0 1 2 150445757 150445779 mRNA hsa-miR-19a RPRD2 miRanda miRanda
14034 chr1 150445761 150445761 1 + G A UCEC 150445761 + 150445741 150445781 41 CAGGCCACCTTTTGCTAGGGGCCCTCCGTTCTTTGCACCAA CAGGCCACCTTTTGCTAGGGACCCTCCGTTCTTTGCACCAA Direct Gain 0 0.871408970053839 0 0.896861970424652 prediction 0.742817940107678 Functional Gain - 21 RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445761 chr1:150445761 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_87931 0 0 1 2 150445757 150445779 mRNA hsa-miR-19b RPRD2 miRanda miRanda
14034 chrX 117582909 117582909 1 + G A HNSC 117582909 + 117582889 117582929 41 TCTCTGCTGACTTCACTGGAGCAATCAAAGTGTTTGTTAAT TCTCTGCTGACTTCACTGGAACAATCAAAGTGTTTGTTAAT Direct Gain 0 0.870250124215544 0 0.047136515378952 prediction 0.740500248431089 Functional Gain - 21 WDR44 ENSG00000131725 CDS Human protein_coding chrX:117582909 chrX:117582909 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87953 0 0 1 3 117582893 117582915 mRNA hsa-miR-137 WDR44 miRanda miRanda
14034 chrX 117582909 117582909 1 + G A HNSC 117582909 + 117582889 117582929 41 TCTCTGCTGACTTCACTGGAGCAATCAAAGTGTTTGTTAAT TCTCTGCTGACTTCACTGGAACAATCAAAGTGTTTGTTAAT Direct Gain 0 0.870250124215544 0 0.047136515378952 prediction 0.740500248431089 Functional Gain - 21 WDR44 ENSG00000131725 CDS Human protein_coding chrX:117582909 chrX:117582909 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87953 0 0 1 3 117582887 117582909 mRNA hsa-miR-145 WDR44 miRanda miRanda
14034 chrX 117582909 117582909 1 + G A HNSC 117582909 + 117582889 117582929 41 TCTCTGCTGACTTCACTGGAGCAATCAAAGTGTTTGTTAAT TCTCTGCTGACTTCACTGGAACAATCAAAGTGTTTGTTAAT Direct Gain 0 0.870250124215544 0 0.047136515378952 prediction 0.740500248431089 Functional Gain - 21 WDR44 ENSG00000131725 CDS Human protein_coding chrX:117582909 chrX:117582909 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_87953 0 0 1 3 117582906 117582927 mRNA hsa-miR-495 WDR44 miRanda miRanda
14034 chr19 21299645 21299645 1 + C A KIRC 21299645 + 21299625 21299665 41 CTTTTACCAGAGACCTTTGGCCAGAGCAAGACATAAAAGAT CTTTTACCAGAGACCTTTGGACAGAGCAAGACATAAAAGAT Direct Gain 0 0.86955809132596 0 0.923363447189331 prediction 0.73911618265192 Functional Gain - 21 ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21299645 chr19:21299645 nonsynonymous SNV 0.152 1 hm6A_associated_SNPs_87967 0 0 0 1 21299635 21299657 mRNA hsa-miR-431 ZNF714 miRanda miRanda
14034 chr4 115597395 115597395 1 + G A UCEC 115597395 + 115597375 115597415 41 CCACAATGGAATCCTCAATGGCAAGTACAAAAGAAATGGCC CCACAATGGAATCCTCAATGACAAGTACAAAAGAAATGGCC Direct Gain 0 0.869319733153648 0 0.934117078781128 prediction 0.738639466307296 Functional Gain - 21 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115597395 chr4:115597395 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_87972 0 0 1 2 115597376 115597398 mRNA hsa-miR-33a UGT8 miRanda miRanda
14034 chr4 115597395 115597395 1 + G A UCEC 115597395 + 115597375 115597415 41 CCACAATGGAATCCTCAATGGCAAGTACAAAAGAAATGGCC CCACAATGGAATCCTCAATGACAAGTACAAAAGAAATGGCC Direct Gain 0 0.869319733153648 0 0.934117078781128 prediction 0.738639466307296 Functional Gain - 21 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115597395 chr4:115597395 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_87972 0 0 1 2 115597377 115597398 mRNA hsa-miR-33b UGT8 miRanda miRanda
14034 chr16 70406154 70406154 1 + T A rs114589283 70406154 + 70406134 70406174 41 CCATCTTTATAATAATCTGGTCACAGTGGTAGTCGCTGGCC CCATCTTTATAATAATCTGGACACAGTGGTAGTCGCTGGCC Direct Gain 0 0.867366697550187 0 0.927353978157043 prediction 0.734733395100374 Functional Gain - 21 DDX19A ENSG00000168872 UTR3 Human protein_coding chr16:70406154 chr16:70406154 . . 0 hm6A_associated_SNPs_88026 0 0 1 2 70406142 70406164 mRNA hsa-miR-10a DDX19A miRanda miRanda
14034 chr16 70406154 70406154 1 + T A rs114589283 70406154 + 70406134 70406174 41 CCATCTTTATAATAATCTGGTCACAGTGGTAGTCGCTGGCC CCATCTTTATAATAATCTGGACACAGTGGTAGTCGCTGGCC Direct Gain 0 0.867366697550187 0 0.927353978157043 prediction 0.734733395100374 Functional Gain - 21 DDX19A ENSG00000168872 UTR3 Human protein_coding chr16:70406154 chr16:70406154 . . 0 hm6A_associated_SNPs_88026 0 0 1 2 70406136 70406158 mRNA hsa-miR-542-3p DDX19A miRanda miRanda
14034 chr2 190728607 190728607 1 + G A UCEC 190728607 + 190728587 190728627 41 GCATGGAATTTGGCCCAGAAGCACAAGTTAAAAACCTCATT GCATGGAATTTGGCCCAGAAACACAAGTTAAAAACCTCATT Direct Gain 0 0.867101334259511 0 0.909801602363586 prediction 0.734202668519021 Functional Gain - 21 PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728607 chr2:190728607 synonymous SNV . 0 hm6A_associated_SNPs_88036 0 0 1 1 190728587 190728612 mRNA hsa-miR-218 PMS1 miRanda miRanda
14034 chr17 36891573 36891573 1 + G A rs143182107 36891573 + 36891553 36891593 41 AGTTCAAGCTACCCCCGTTGGCAGCTGTGGTGGCCCCACTG AGTTCAAGCTACCCCCGTTGACAGCTGTGGTGGCCCCACTG Direct Gain 0 0.867080151402985 0 0.00219854712486267 prediction 0.73416030280597 Functional Gain - 21 PCGF2 ENSG00000056661 CDS Human other chr17:36891573 chr17:36891573 nonsynonymous SNV 0.990 0 hm6A_associated_SNPs_88038 0 0 0 1 36891557 36891579 mRNA hsa-miR-22 CISD3 miRanda miRanda
14034 chr2 97911280 97911280 1 + G A LUSC 97911280 + 97911260 97911300 41 TCATCAAAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGT TCATCAAAAAGAGACCAAGAACTTGCTTTCCAGGGCACAGT Direct Gain 0 0.865925559587373 0 0.985221803188324 prediction 0.731851119174745 Functional Gain - 21 ANKRD36 ENSG00000135976 CDS Human protein_coding chr2:97911280 chr2:97911280 synonymous SNV . 0 hm6A_associated_SNPs_88073 0 0 0 2 97911278 97911301 mRNA hsa-miR-193b ANKRD36B miRanda miRanda
14034 chr2 97911280 97911280 1 + G A LUSC 97911280 + 97911260 97911300 41 TCATCAAAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGT TCATCAAAAAGAGACCAAGAACTTGCTTTCCAGGGCACAGT Direct Gain 0 0.865925559587373 0 0.985221803188324 prediction 0.731851119174745 Functional Gain - 21 ANKRD36 ENSG00000135976 CDS Human protein_coding chr2:97911280 chr2:97911280 synonymous SNV . 0 hm6A_associated_SNPs_88073 0 0 0 2 97911276 97911297 mRNA hsa-miR-874 ANKRD36B miRanda miRanda
14034 chr11 3430118 3430118 1 + G A UCEC 3430118 + 3430098 3430138 41 CTTCTTCTCAGAGTCTCAGGGCAAATCCTTTCGAGCAGCGC CTTCTTCTCAGAGTCTCAGGACAAATCCTTTCGAGCAGCGC Direct Gain 0 0.864460295142052 0 0.951359272003174 prediction 0.728920590284104 Functional Gain - 21 TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3430118 chr11:3430118 . . 0 hm6A_associated_SNPs_88112 0 0 0 3 3430098 3430119 mRNA hsa-miR-125b LOC650368 miRanda miRanda
14034 chr11 3430118 3430118 1 + G A UCEC 3430118 + 3430098 3430138 41 CTTCTTCTCAGAGTCTCAGGGCAAATCCTTTCGAGCAGCGC CTTCTTCTCAGAGTCTCAGGACAAATCCTTTCGAGCAGCGC Direct Gain 0 0.864460295142052 0 0.951359272003174 prediction 0.728920590284104 Functional Gain - 21 TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3430118 chr11:3430118 . . 0 hm6A_associated_SNPs_88112 0 0 0 3 3430096 3430119 mRNA hsa-miR-125a-5p LOC650368 miRanda miRanda
14034 chr11 3430118 3430118 1 + G A UCEC 3430118 + 3430098 3430138 41 CTTCTTCTCAGAGTCTCAGGGCAAATCCTTTCGAGCAGCGC CTTCTTCTCAGAGTCTCAGGACAAATCCTTTCGAGCAGCGC Direct Gain 0 0.864460295142052 0 0.951359272003174 prediction 0.728920590284104 Functional Gain - 21 TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3430118 chr11:3430118 . . 0 hm6A_associated_SNPs_88112 0 0 0 3 3430099 3430121 mRNA hsa-miR-874 LOC650368 miRanda miRanda
14034 chr11 125448125 125448125 1 + G A BLCA 125448125 + 125448105 125448145 41 GCTCCCCTTGTTTGTGCTTAGCAAAGTGGTGAATGCCATTT GCTCCCCTTGTTTGTGCTTAACAAAGTGGTGAATGCCATTT Direct Gain 0 0.863203339827619 0 0.000882923603057861 prediction 0.726406679655238 Functional Gain - 21 EI24 ENSG00000149547 CDS Human protein_coding chr11:125448125 chr11:125448125 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_88135 0 0 1 1 125448115 125448137 mRNA hsa-miR-197 EI24 miRanda miRanda
14034 chr22 31600506 31600506 1 + G A UCEC 31600506 + 31600486 31600526 41 ACACCCCAGTATGTGGACGAGCAGTTCCTGTCACGCCTCTT ACACCCCAGTATGTGGACGAACAGTTCCTGTCACGCCTCTT Direct Gain 0 0.861823549842669 0 0.223100423812866 prediction 0.723647099685337 Functional Gain - 21 RNF185 ENSG00000138942 CDS Human protein_coding chr22:31600506 chr22:31600506 synonymous SNV . 0 hm6A_associated_SNPs_88165 0 0 0 2 31600497 31600520 mRNA hsa-miR-542-3p RNF185 miRanda miRanda
14034 chr22 31600506 31600506 1 + G A UCEC 31600506 + 31600486 31600526 41 ACACCCCAGTATGTGGACGAGCAGTTCCTGTCACGCCTCTT ACACCCCAGTATGTGGACGAACAGTTCCTGTCACGCCTCTT Direct Gain 0 0.861823549842669 0 0.223100423812866 prediction 0.723647099685337 Functional Gain - 21 RNF185 ENSG00000138942 CDS Human protein_coding chr22:31600506 chr22:31600506 synonymous SNV . 0 hm6A_associated_SNPs_88165 0 0 0 2 31600497 31600516 mRNA hsa-miR-873 RNF185 miRanda miRanda
14034 chr22 41574984 41574984 1 + G A rs575190212 41574984 + 41574964 41575004 41 CACCTTGTAGTATTTTGGGAGCAAAAAAATTATTTTCTCTT CACCTTGTAGTATTTTGGGAACAAAAAAATTATTTTCTCTT Direct Gain 0 0.861217652456824 0 0.923563122749329 prediction 0.722435304913648 Functional Gain - 21 EP300 ENSG00000231993;ENSG00000232754 ncRNA_intronic Human other chr22:41574984 chr22:41574984 . . 0 hm6A_associated_SNPs_88181 0 0 1 5 41574971 41574991 mRNA hsa-miR-129-5p EP300 miRanda miRanda
14034 chr22 41574984 41574984 1 + G A rs575190212 41574984 + 41574964 41575004 41 CACCTTGTAGTATTTTGGGAGCAAAAAAATTATTTTCTCTT CACCTTGTAGTATTTTGGGAACAAAAAAATTATTTTCTCTT Direct Gain 0 0.861217652456824 0 0.923563122749329 prediction 0.722435304913648 Functional Gain - 21 EP300 ENSG00000231993;ENSG00000232754 ncRNA_intronic Human other chr22:41574984 chr22:41574984 . . 0 hm6A_associated_SNPs_88181 0 0 1 5 41574967 41574990 mRNA hsa-miR-137 EP300 miRanda miRanda
14034 chr22 41574984 41574984 1 + G A rs575190212 41574984 + 41574964 41575004 41 CACCTTGTAGTATTTTGGGAGCAAAAAAATTATTTTCTCTT CACCTTGTAGTATTTTGGGAACAAAAAAATTATTTTCTCTT Direct Gain 0 0.861217652456824 0 0.923563122749329 prediction 0.722435304913648 Functional Gain - 21 EP300 ENSG00000231993;ENSG00000232754 ncRNA_intronic Human other chr22:41574984 chr22:41574984 . . 0 hm6A_associated_SNPs_88181 0 0 1 5 41574965 41574985 mRNA hsa-miR-150 EP300 miRanda miRanda
14034 chr22 41574984 41574984 1 + G A rs575190212 41574984 + 41574964 41575004 41 CACCTTGTAGTATTTTGGGAGCAAAAAAATTATTTTCTCTT CACCTTGTAGTATTTTGGGAACAAAAAAATTATTTTCTCTT Direct Gain 0 0.861217652456824 0 0.923563122749329 prediction 0.722435304913648 Functional Gain - 21 EP300 ENSG00000231993;ENSG00000232754 ncRNA_intronic Human other chr22:41574984 chr22:41574984 . . 0 hm6A_associated_SNPs_88181 0 0 1 5 41574982 41575003 mRNA hsa-miR-539 EP300 miRanda miRanda
14034 chr22 41574984 41574984 1 + G A rs575190212 41574984 + 41574964 41575004 41 CACCTTGTAGTATTTTGGGAGCAAAAAAATTATTTTCTCTT CACCTTGTAGTATTTTGGGAACAAAAAAATTATTTTCTCTT Direct Gain 0 0.861217652456824 0 0.923563122749329 prediction 0.722435304913648 Functional Gain - 21 EP300 ENSG00000231993;ENSG00000232754 ncRNA_intronic Human other chr22:41574984 chr22:41574984 . . 0 hm6A_associated_SNPs_88181 0 0 1 5 41574975 41574995 mRNA hsa-miR-590-3p EP300 miRanda miRanda
14034 chr15 48062786 48062786 1 + G A HNSC 48062786 + 48062766 48062806 41 TTGCTGCTTTTGTTTTGGGGGCATTCATTGCAGGTGTGGCA TTGCTGCTTTTGTTTTGGGGACATTCATTGCAGGTGTGGCA Direct Gain 0 0.859503393067374 0 0.938904106616974 prediction 0.719006786134747 Functional Gain - 21 SEMA6D ENSG00000137872 CDS Human protein_coding chr15:48062786 chr15:48062786 nonsynonymous SNV 0.994 4 hm6A_associated_SNPs_88224 0 0 0 1 48062770 48062791 mRNA hsa-miR-365 SEMA6D miRanda miRanda
14034 chr15 34520707 34520707 1 + G A COAD 34520707 + 34520687 34520727 41 TTGGGAACCTGATGGGTTTGGCATTGGCTGTTTACAAGTGC TTGGGAACCTGATGGGTTTGACATTGGCTGTTTACAAGTGC Direct Gain 0 0.859382977571172 0 0.634300470352173 prediction 0.718765955142343 Functional Gain - 21 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520707 chr15:34520707 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_88229 0 0 1 5 34520701 34520722 mRNA hsa-miR-30a TMEM85 miRanda miRanda
14034 chr15 34520707 34520707 1 + G A COAD 34520707 + 34520687 34520727 41 TTGGGAACCTGATGGGTTTGGCATTGGCTGTTTACAAGTGC TTGGGAACCTGATGGGTTTGACATTGGCTGTTTACAAGTGC Direct Gain 0 0.859382977571172 0 0.634300470352173 prediction 0.718765955142343 Functional Gain - 21 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520707 chr15:34520707 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_88229 0 0 1 5 34520697 34520722 mRNA hsa-miR-30c TMEM85 miRanda miRanda
14034 chr15 34520707 34520707 1 + G A COAD 34520707 + 34520687 34520727 41 TTGGGAACCTGATGGGTTTGGCATTGGCTGTTTACAAGTGC TTGGGAACCTGATGGGTTTGACATTGGCTGTTTACAAGTGC Direct Gain 0 0.859382977571172 0 0.634300470352173 prediction 0.718765955142343 Functional Gain - 21 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520707 chr15:34520707 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_88229 0 0 1 5 34520701 34520722 mRNA hsa-miR-30d TMEM85 miRanda miRanda
14034 chr15 34520707 34520707 1 + G A COAD 34520707 + 34520687 34520727 41 TTGGGAACCTGATGGGTTTGGCATTGGCTGTTTACAAGTGC TTGGGAACCTGATGGGTTTGACATTGGCTGTTTACAAGTGC Direct Gain 0 0.859382977571172 0 0.634300470352173 prediction 0.718765955142343 Functional Gain - 21 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520707 chr15:34520707 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_88229 0 0 1 5 34520701 34520722 mRNA hsa-miR-30b TMEM85 miRanda miRanda
14034 chr15 34520707 34520707 1 + G A COAD 34520707 + 34520687 34520727 41 TTGGGAACCTGATGGGTTTGGCATTGGCTGTTTACAAGTGC TTGGGAACCTGATGGGTTTGACATTGGCTGTTTACAAGTGC Direct Gain 0 0.859382977571172 0 0.634300470352173 prediction 0.718765955142343 Functional Gain - 21 EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520707 chr15:34520707 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_88229 0 0 1 5 34520701 34520722 mRNA hsa-miR-30e TMEM85 miRanda miRanda
14034 chr14 63757832 63757832 1 + C A rs149687486 63757832 + 63757812 63757852 41 AGCCAAAAAGGAGGGCACGACCAGAAAGGAACTCCCTTTGC AGCCAAAAAGGAGGGCACGAACAGAAAGGAACTCCCTTTGC Direct Gain 0 0.857045998110421 0 0.9253089427948 prediction 0.714091996220841 Functional Gain - 21 RHOJ ENSG00000126785 CDS Human protein_coding chr14:63757832 chr14:63757832 nonsynonymous SNV . 0 hm6A_associated_SNPs_88295 0 0 0 1 63757810 63757833 mRNA hsa-miR-346 RHOJ miRanda miRanda
14034 chr1 171765678 171765678 1 + G A COAD 171765678 + 171765658 171765698 41 GGCTAAAAGACTCAGTGCTGGCTGGGCTCAAGGCAGTGTTC GGCTAAAAGACTCAGTGCTGACTGGGCTCAAGGCAGTGTTC Direct Gain 0 0.854294817721066 0 0.777714788913727 prediction 0.708589635442132 Functional Gain - 21 METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765678 chr1:171765678 nonsynonymous SNV 0.977 0 hm6A_associated_SNPs_88392 0 0 1 2 171765659 171765681 mRNA hsa-miR-15a METTL13 miRanda miRanda
14034 chr1 171765678 171765678 1 + G A COAD 171765678 + 171765658 171765698 41 GGCTAAAAGACTCAGTGCTGGCTGGGCTCAAGGCAGTGTTC GGCTAAAAGACTCAGTGCTGACTGGGCTCAAGGCAGTGTTC Direct Gain 0 0.854294817721066 0 0.777714788913727 prediction 0.708589635442132 Functional Gain - 21 METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765678 chr1:171765678 nonsynonymous SNV 0.977 0 hm6A_associated_SNPs_88392 0 0 1 2 171765659 171765681 mRNA hsa-miR-424 METTL13 miRanda miRanda
14034 chr1 169356298 169356298 1 + T A rs74383380 169356298 + 169356278 169356318 41 CTGATAATCCATTTTTTGAGTCTTCACCAACCACCTTACTT CTGATAATCCATTTTTTGAGACTTCACCAACCACCTTACTT Direct Gain 0 0.853209584434348 0 0.119047343730927 prediction 0.706419168868696 Functional Gain - 21 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356298 chr1:169356298 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_88420 0 0 1 6 169356295 169356315 mRNA hsa-miR-18a BLZF1 miRanda miRanda
14034 chr1 169356298 169356298 1 + T A rs74383380 169356298 + 169356278 169356318 41 CTGATAATCCATTTTTTGAGTCTTCACCAACCACCTTACTT CTGATAATCCATTTTTTGAGACTTCACCAACCACCTTACTT Direct Gain 0 0.853209584434348 0 0.119047343730927 prediction 0.706419168868696 Functional Gain - 21 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356298 chr1:169356298 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_88420 0 0 1 6 169356281 169356304 mRNA hsa-miR-7 BLZF1 miRanda miRanda
14034 chr1 169356298 169356298 1 + T A rs74383380 169356298 + 169356278 169356318 41 CTGATAATCCATTTTTTGAGTCTTCACCAACCACCTTACTT CTGATAATCCATTTTTTGAGACTTCACCAACCACCTTACTT Direct Gain 0 0.853209584434348 0 0.119047343730927 prediction 0.706419168868696 Functional Gain - 21 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356298 chr1:169356298 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_88420 0 0 1 6 169356292 169356313 mRNA hsa-miR-140-5p BLZF1 miRanda miRanda
14034 chr1 169356298 169356298 1 + T A rs74383380 169356298 + 169356278 169356318 41 CTGATAATCCATTTTTTGAGTCTTCACCAACCACCTTACTT CTGATAATCCATTTTTTGAGACTTCACCAACCACCTTACTT Direct Gain 0 0.853209584434348 0 0.119047343730927 prediction 0.706419168868696 Functional Gain - 21 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356298 chr1:169356298 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_88420 0 0 1 6 169356279 169356298 mRNA hsa-miR-371-5p BLZF1 miRanda miRanda
14034 chr1 169356298 169356298 1 + T A rs74383380 169356298 + 169356278 169356318 41 CTGATAATCCATTTTTTGAGTCTTCACCAACCACCTTACTT CTGATAATCCATTTTTTGAGACTTCACCAACCACCTTACTT Direct Gain 0 0.853209584434348 0 0.119047343730927 prediction 0.706419168868696 Functional Gain - 21 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356298 chr1:169356298 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_88420 0 0 1 6 169356293 169356315 mRNA hsa-miR-18b BLZF1 miRanda miRanda
14034 chr1 169356298 169356298 1 + T A rs74383380 169356298 + 169356278 169356318 41 CTGATAATCCATTTTTTGAGTCTTCACCAACCACCTTACTT CTGATAATCCATTTTTTGAGACTTCACCAACCACCTTACTT Direct Gain 0 0.853209584434348 0 0.119047343730927 prediction 0.706419168868696 Functional Gain - 21 BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356298 chr1:169356298 nonsynonymous SNV 0.994 0 hm6A_associated_SNPs_88420 0 0 1 6 169356284 169356303 mRNA hsa-miR-499-5p BLZF1 miRanda miRanda
14034 chr11 6265513 6265513 1 + G A GBM 6265513 + 6265493 6265533 41 CGCATTGAACGGCTGGAGTGGCAGACTCGAGAGTGGCCAAT CGCATTGAACGGCTGGAGTGACAGACTCGAGAGTGGCCAAT Direct Gain 0 0.853105526702706 0 0.931720972061157 prediction 0.706211053405411 Functional Gain - 21 CNGA4 ENSG00000132259 CDS Human protein_coding chr11:6265513 chr11:6265513 stopgain 0.998 0 hm6A_associated_SNPs_88423 0 0 0 2 6265510 6265532 mRNA hsa-miR-328 CNGA4 miRanda miRanda
14034 chr11 6265513 6265513 1 + G A GBM 6265513 + 6265493 6265533 41 CGCATTGAACGGCTGGAGTGGCAGACTCGAGAGTGGCCAAT CGCATTGAACGGCTGGAGTGACAGACTCGAGAGTGGCCAAT Direct Gain 0 0.853105526702706 0 0.931720972061157 prediction 0.706211053405411 Functional Gain - 21 CNGA4 ENSG00000132259 CDS Human protein_coding chr11:6265513 chr11:6265513 stopgain 0.998 0 hm6A_associated_SNPs_88423 0 0 0 2 6265500 6265519 mRNA hsa-miR-346 CNGA4 miRanda miRanda
14034 chr12 51213744 51213744 1 + G A rs184951419 51213744 + 51213724 51213764 41 TGGAAAATGACCTCAAGGAAGCTACGGGCACAACTGGAAGC TGGAAAATGACCTCAAGGAAACTACGGGCACAACTGGAAGC Direct Gain 0 0.852056519157866 0 0.986996650695801 prediction 0.704113038315732 Functional Gain - 21 ATF1 ENSG00000123268 UTR3 Human protein_coding chr12:51213744 chr12:51213744 . . 0 hm6A_associated_SNPs_88455 0 0 1 1 51213740 51213762 mRNA hsa-miR-145 ATF1 miRanda miRanda
14034 chr1 27657240 27657240 1 + G A HNSC 27657240 + 27657220 27657260 41 CCCCATCATCGGCCACATGGGCATCTGCACATCCACAGGAG CCCCATCATCGGCCACATGGACATCTGCACATCCACAGGAG Direct Gain 0 0.850735430058841 0 0.91523277759552 prediction 0.701470860117683 Functional Gain - 21 TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27657240 chr1:27657240 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_88480 0 0 1 2 27657239 27657262 mRNA hsa-miR-10a TMEM222 miRanda miRanda
14034 chr1 27657240 27657240 1 + G A HNSC 27657240 + 27657220 27657260 41 CCCCATCATCGGCCACATGGGCATCTGCACATCCACAGGAG CCCCATCATCGGCCACATGGACATCTGCACATCCACAGGAG Direct Gain 0 0.850735430058841 0 0.91523277759552 prediction 0.701470860117683 Functional Gain - 21 TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27657240 chr1:27657240 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_88480 0 0 1 2 27657220 27657243 mRNA hsa-miR-874 TMEM222 miRanda miRanda
14034 chr12 95694213 95694213 1 + G A UCEC 95694213 + 95694193 95694233 41 AGAGTGAAGATGAACCACAAGCAGATGGAAGTGGTCTGACC AGAGTGAAGATGAACCACAAACAGATGGAAGTGGTCTGACC Direct Gain 0 0.850163113622382 0 0.984923243522644 prediction 0.700326227244765 Functional Gain - 21 VEZT ENSG00000028203 CDS Human protein_coding chr12:95694213 chr12:95694213 nonsynonymous SNV 0.001 0 hm6A_associated_SNPs_88505 0 0 1 1 95694189 95694214 mRNA hsa-miR-9 VEZT miRanda miRanda
14034 chr10 90773969 90773969 1 + C A UCEC 90773969 + 90773949 90773989 41 AAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGA AAAGAATGGTGTCAATGAAGACAAAATAGATGAGATCAAGA Direct Gain 0 0.849660975490963 0 0.881974697113037 prediction 0.699321950981925 Functional Gain - 21 FAS ENSG00000026103 CDS Human protein_coding chr10:90773969 chr10:90773969 nonsynonymous SNV 0.593 3 hm6A_associated_SNPs_88516 0 0 0 3 90773965 90773986 mRNA hsa-miR-216a FAS miRanda miRanda
14034 chr10 90773969 90773969 1 + C A UCEC 90773969 + 90773949 90773989 41 AAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGA AAAGAATGGTGTCAATGAAGACAAAATAGATGAGATCAAGA Direct Gain 0 0.849660975490963 0 0.881974697113037 prediction 0.699321950981925 Functional Gain - 21 FAS ENSG00000026103 CDS Human protein_coding chr10:90773969 chr10:90773969 nonsynonymous SNV 0.593 3 hm6A_associated_SNPs_88516 0 0 0 3 90773950 90773973 mRNA hsa-miR-135a FAS miRanda miRanda
14034 chr10 90773969 90773969 1 + C A UCEC 90773969 + 90773949 90773989 41 AAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGA AAAGAATGGTGTCAATGAAGACAAAATAGATGAGATCAAGA Direct Gain 0 0.849660975490963 0 0.881974697113037 prediction 0.699321950981925 Functional Gain - 21 FAS ENSG00000026103 CDS Human protein_coding chr10:90773969 chr10:90773969 nonsynonymous SNV 0.593 3 hm6A_associated_SNPs_88516 0 0 0 3 90773949 90773973 mRNA hsa-miR-135b FAS miRanda miRanda
14034 chr12 112460450 112460450 1 + G A UCEC 112460450 + 112460430 112460470 41 AAGGGGGCCGAGAAAGAGGAGCTGTAAAAAGGCTGTCTGTG AAGGGGGCCGAGAAAGAGGAACTGTAAAAAGGCTGTCTGTG Direct Gain 0 0.846264561639684 0 0.997646331787109 prediction 0.692529123279368 Functional Gain - 21 ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460450 chr12:112460450 synonymous SNV . 0 hm6A_associated_SNPs_88621 0 0 1 1 112460428 112460450 mRNA hsa-miR-211 ERP29 miRanda miRanda
14034 chr8 110566124 110566124 1 + C A OV 110566124 + 110566104 110566144 41 GGACGGAAATTAAGTGGAGACCAAATAACTTTGCCAACTAC GGACGGAAATTAAGTGGAGAACAAATAACTTTGCCAACTAC Direct Gain 0 0.844212732133987 0 0.791689097881317 prediction 0.688425464267975 Functional Gain - 21 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110566124 chr8:110566124 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_88665 0 0 1 3 110566119 110566141 mRNA hsa-miR-96 EBAG9 miRanda miRanda
14034 chr8 110566124 110566124 1 + C A OV 110566124 + 110566104 110566144 41 GGACGGAAATTAAGTGGAGACCAAATAACTTTGCCAACTAC GGACGGAAATTAAGTGGAGAACAAATAACTTTGCCAACTAC Direct Gain 0 0.844212732133987 0 0.791689097881317 prediction 0.688425464267975 Functional Gain - 21 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110566124 chr8:110566124 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_88665 0 0 1 3 110566118 110566141 mRNA hsa-miR-182 EBAG9 miRanda miRanda
14034 chr8 110566124 110566124 1 + C A OV 110566124 + 110566104 110566144 41 GGACGGAAATTAAGTGGAGACCAAATAACTTTGCCAACTAC GGACGGAAATTAAGTGGAGAACAAATAACTTTGCCAACTAC Direct Gain 0 0.844212732133987 0 0.791689097881317 prediction 0.688425464267975 Functional Gain - 21 EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110566124 chr8:110566124 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_88665 0 0 1 3 110566120 110566141 mRNA hsa-miR-1271 EBAG9 miRanda miRanda
14034 chr7 102584826 102584826 1 + G A STAD 102584826 + 102584806 102584846 41 TACCTCTACTACTGGTTAAAGCACCACTACAATGTCCATTT TACCTCTACTACTGGTTAAAACACCACTACAATGTCCATTT Direct Gain 0 0.842731062216628 0 0.826450049877167 prediction 0.685462124433256 Functional Gain - 21 LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102584826 chr7:102584826 synonymous SNV . 0 hm6A_associated_SNPs_88707 0 0 1 3 102584811 102584831 mRNA hsa-miR-218 LRRC17 miRanda miRanda
14034 chr7 102584826 102584826 1 + G A STAD 102584826 + 102584806 102584846 41 TACCTCTACTACTGGTTAAAGCACCACTACAATGTCCATTT TACCTCTACTACTGGTTAAAACACCACTACAATGTCCATTT Direct Gain 0 0.842731062216628 0 0.826450049877167 prediction 0.685462124433256 Functional Gain - 21 LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102584826 chr7:102584826 synonymous SNV . 0 hm6A_associated_SNPs_88707 0 0 1 3 102584811 102584834 mRNA hsa-miR-140-5p LRRC17 miRanda miRanda
14034 chr7 102584826 102584826 1 + G A STAD 102584826 + 102584806 102584846 41 TACCTCTACTACTGGTTAAAGCACCACTACAATGTCCATTT TACCTCTACTACTGGTTAAAACACCACTACAATGTCCATTT Direct Gain 0 0.842731062216628 0 0.826450049877167 prediction 0.685462124433256 Functional Gain - 21 LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102584826 chr7:102584826 synonymous SNV . 0 hm6A_associated_SNPs_88707 0 0 1 3 102584814 102584836 mRNA hsa-miR-142-3p LRRC17 miRanda miRanda
14034 chr1 10205028 10205028 1 + C A UCEC 10205028 + 10205008 10205048 41 GATTTGAAAAATAATGAAAGCCAATGGAAAGATTCCCCACT GATTTGAAAAATAATGAAAGACAATGGAAAGATTCCCCACT Direct Gain 0 0.838362648009759 0 0.404228806495667 prediction 0.676725296019518 Functional Gain - 21 UBE4B ENSG00000130939 CDS Human protein_coding chr1:10205028 chr1:10205028 nonsynonymous SNV 0.997 2 hm6A_associated_SNPs_88834 0 0 1 1 10205027 10205048 mRNA hsa-miR-491-5p UBE4B miRanda miRanda
14034 chr11 13408214 13408214 1 + G A UCEC 13408214 + 13408194 13408234 41 GTAGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG GTAGTCCCAGTAATGATGAGACAGCAATGGCTGTCATCATG Direct Gain 0 0.837968968228575 0 0.978616714477539 prediction 0.675937936457149 Functional Gain - 21 ARNTL ENSG00000133794 CDS Human protein_coding chr11:13408214 chr11:13408214 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_88843 0 0 0 1 13408208 13408231 mRNA hsa-miR-425 ARNTL miRanda miRanda
14034 chr5 56212696 56212696 1 + G A rs565507306 56212696 + 56212676 56212716 41 GACATCAATCAAGGAGAAGAGCTTTTTTCAAACTACTACAC GACATCAATCAAGGAGAAGAACTTTTTTCAAACTACTACAC Direct Gain 0 0.837442423576736 0 0.870484232902527 prediction 0.674884847153473 Functional Gain - 21 SETD9 ENSG00000155542 CDS Human protein_coding chr5:56212696 chr5:56212696 synonymous SNV . 0 hm6A_associated_SNPs_88863 0 0 1 4 56212680 56212701 mRNA hsa-miR-320a C5orf35 miRanda miRanda
14034 chr5 56212696 56212696 1 + G A rs565507306 56212696 + 56212676 56212716 41 GACATCAATCAAGGAGAAGAGCTTTTTTCAAACTACTACAC GACATCAATCAAGGAGAAGAACTTTTTTCAAACTACTACAC Direct Gain 0 0.837442423576736 0 0.870484232902527 prediction 0.674884847153473 Functional Gain - 21 SETD9 ENSG00000155542 CDS Human protein_coding chr5:56212696 chr5:56212696 synonymous SNV . 0 hm6A_associated_SNPs_88863 0 0 1 4 56212680 56212701 mRNA hsa-miR-320b C5orf35 miRanda miRanda
14034 chr5 56212696 56212696 1 + G A rs565507306 56212696 + 56212676 56212716 41 GACATCAATCAAGGAGAAGAGCTTTTTTCAAACTACTACAC GACATCAATCAAGGAGAAGAACTTTTTTCAAACTACTACAC Direct Gain 0 0.837442423576736 0 0.870484232902527 prediction 0.674884847153473 Functional Gain - 21 SETD9 ENSG00000155542 CDS Human protein_coding chr5:56212696 chr5:56212696 synonymous SNV . 0 hm6A_associated_SNPs_88863 0 0 1 4 56212682 56212701 mRNA hsa-miR-320c C5orf35 miRanda miRanda
14034 chr5 56212696 56212696 1 + G A rs565507306 56212696 + 56212676 56212716 41 GACATCAATCAAGGAGAAGAGCTTTTTTCAAACTACTACAC GACATCAATCAAGGAGAAGAACTTTTTTCAAACTACTACAC Direct Gain 0 0.837442423576736 0 0.870484232902527 prediction 0.674884847153473 Functional Gain - 21 SETD9 ENSG00000155542 CDS Human protein_coding chr5:56212696 chr5:56212696 synonymous SNV . 0 hm6A_associated_SNPs_88863 0 0 1 4 56212683 56212701 mRNA hsa-miR-320d C5orf35 miRanda miRanda
14034 chr16 68260561 68260561 1 + G A rs146709981 68260561 + 68260541 68260581 41 AAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAA AAAGAACAGGAGCAGCATAGACTGTTTGAGCTTTGGGGAAA Direct Gain 0 0.837033654187576 0 0.80704802274704 prediction 0.674067308375152 Functional Gain - 21 NFATC3 ENSG00000262160;ENSG00000263276 ncRNA_exonic Human other chr16:68260561 chr16:68260561 . . 0 hm6A_associated_SNPs_88874 0 0 1 1 68260552 68260571 mRNA hsa-miR-371-5p NFATC3 miRanda miRanda
14034 chr11 105962196 105962196 1 + G A UCEC 105962196 + 105962176 105962216 41 GAGAGGAAGAAAAAGAATGGGCATTTGAGGTAAGAAATTTG GAGAGGAAGAAAAAGAATGGACATTTGAGGTAAGAAATTTG Direct Gain 0 0.836641359576008 0 0.776856422424316 prediction 0.673282719152016 Functional Gain - 21 AASDHPPT ENSG00000149313 CDS Human protein_coding chr11:105962196 chr11:105962196 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_88889 0 0 1 1 105962180 105962201 mRNA hsa-miR-365 AASDHPPT miRanda miRanda
14034 chr4 41956251 41956251 1 + G A rs6852659 41956251 + 41956231 41956271 41 AAGCTACAAATATAGTATAAGCATTATTAGCAGCTGGTACT AAGCTACAAATATAGTATAAACATTATTAGCAGCTGGTACT Direct Gain 0 0.836172789750017 0 0.422579646110535 prediction 0.672345579500033 Functional Gain - 21 TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41956251 chr4:41956251 . . 0 hm6A_associated_SNPs_88904 0 0 1 1 41956236 41956257 mRNA hsa-miR-155 TMEM33 miRanda miRanda
14034 chr7 23236325 23236325 1 + T A STAD 23236325 + 23236305 23236345 41 TCTGTCCAACGTTTAATAAATCAATGGAGGAACAGGGTAAA TCTGTCCAACGTTTAATAAAACAATGGAGGAACAGGGTAAA Direct Gain 0 0.835419908802473 0 0.67140394449234 prediction 0.670839817604946 Functional Gain - 21 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23236325 chr7:23236325 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_88931 0 0 1 5 23236319 23236343 mRNA hsa-miR-10a NUPL2 miRanda miRanda
14034 chr7 23236325 23236325 1 + T A STAD 23236325 + 23236305 23236345 41 TCTGTCCAACGTTTAATAAATCAATGGAGGAACAGGGTAAA TCTGTCCAACGTTTAATAAAACAATGGAGGAACAGGGTAAA Direct Gain 0 0.835419908802473 0 0.67140394449234 prediction 0.670839817604946 Functional Gain - 21 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23236325 chr7:23236325 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_88931 0 0 1 5 23236319 23236343 mRNA hsa-miR-10b NUPL2 miRanda miRanda
14034 chr7 23236325 23236325 1 + T A STAD 23236325 + 23236305 23236345 41 TCTGTCCAACGTTTAATAAATCAATGGAGGAACAGGGTAAA TCTGTCCAACGTTTAATAAAACAATGGAGGAACAGGGTAAA Direct Gain 0 0.835419908802473 0 0.67140394449234 prediction 0.670839817604946 Functional Gain - 21 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23236325 chr7:23236325 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_88931 0 0 1 5 23236313 23236334 mRNA hsa-miR-136 NUPL2 miRanda miRanda
14034 chr7 23236325 23236325 1 + T A STAD 23236325 + 23236305 23236345 41 TCTGTCCAACGTTTAATAAATCAATGGAGGAACAGGGTAAA TCTGTCCAACGTTTAATAAAACAATGGAGGAACAGGGTAAA Direct Gain 0 0.835419908802473 0 0.67140394449234 prediction 0.670839817604946 Functional Gain - 21 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23236325 chr7:23236325 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_88931 0 0 1 5 23236319 23236342 mRNA hsa-miR-339-5p NUPL2 miRanda miRanda
14034 chr7 23236325 23236325 1 + T A STAD 23236325 + 23236305 23236345 41 TCTGTCCAACGTTTAATAAATCAATGGAGGAACAGGGTAAA TCTGTCCAACGTTTAATAAAACAATGGAGGAACAGGGTAAA Direct Gain 0 0.835419908802473 0 0.67140394449234 prediction 0.670839817604946 Functional Gain - 21 NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23236325 chr7:23236325 nonsynonymous SNV 0.979 0 hm6A_associated_SNPs_88931 0 0 1 5 23236322 23236344 mRNA hsa-miR-504 NUPL2 miRanda miRanda
14034 chr8 25364262 25364262 1 + G A PAAD 25364262 + 25364242 25364282 41 AAAATAAAAATATTCCAAAAGCAAAAAATAAGTCAGAAAGT AAAATAAAAATATTCCAAAAACAAAAAATAAGTCAGAAAGT Direct Gain 0 0.835070814396667 0 0.974281430244446 prediction 0.670141628793334 Functional Gain - 21 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364262 chr8:25364262 nonsynonymous SNV 0.262 0 hm6A_associated_SNPs_88939 0 0 1 2 25364250 25364269 mRNA hsa-miR-129-5p CDCA2 miRanda miRanda
14034 chr8 25364262 25364262 1 + G A PAAD 25364262 + 25364242 25364282 41 AAAATAAAAATATTCCAAAAGCAAAAAATAAGTCAGAAAGT AAAATAAAAATATTCCAAAAACAAAAAATAAGTCAGAAAGT Direct Gain 0 0.835070814396667 0 0.974281430244446 prediction 0.670141628793334 Functional Gain - 21 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364262 chr8:25364262 nonsynonymous SNV 0.262 0 hm6A_associated_SNPs_88939 0 0 1 2 25364245 25364268 mRNA hsa-miR-137 CDCA2 miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053710 39053732 mRNA hsa-miR-302a GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053711 39053732 mRNA hsa-miR-302b GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053711 39053732 mRNA hsa-miR-302c GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053710 39053732 mRNA hsa-miR-302d GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053711 39053732 mRNA hsa-miR-372 GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053711 39053732 mRNA hsa-miR-373 GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053712 39053732 mRNA hsa-miR-520e GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053711 39053732 mRNA hsa-miR-520a-3p GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053710 39053732 mRNA hsa-miR-520b GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053709 39053732 mRNA hsa-miR-520c-3p GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053709 39053732 mRNA hsa-miR-520d-3p GLP1R miRanda miRanda
14034 chr6 39053726 39053726 1 + G A CESC 39053726 + 39053706 39053746 41 TGGGAGCGCTGGCGGCTTGAGCACTTGCACATCCAGAGGGA TGGGAGCGCTGGCGGCTTGAACACTTGCACATCCAGAGGGA Direct Gain 0 0.833956036407805 0 0.606312274932861 prediction 0.667912072815611 Functional Gain - 21 GLP1R ENSG00000112164 CDS Human protein_coding chr6:39053726 chr6:39053726 synonymous SNV . 0 hm6A_associated_SNPs_88979 0 0 0 12 39053718 39053732 mRNA hsa-miR-302e GLP1R miRanda miRanda
14034 chr3 184026723 184026723 1 + C A rs1049448 184026723 + 184026703 184026743 41 CAGCTGATGTTATCAGCAGGCCATGCATCCTGCTGCCAAGG CAGCTGATGTTATCAGCAGGACATGCATCCTGCTGCCAAGG Direct Gain 0 0.833154048584657 0 0.920670986175537 prediction 0.666308097169314 Functional Gain - 21 PSMD2 ENSG00000175166 UTR3 Human protein_coding chr3:184026723 chr3:184026723 . . 0 hm6A_associated_SNPs_89000 0 0 1 2 184026717 184026738 mRNA hsa-miR-214 PSMD2 miRanda miRanda
14034 chr3 184026723 184026723 1 + C A rs1049448 184026723 + 184026703 184026743 41 CAGCTGATGTTATCAGCAGGCCATGCATCCTGCTGCCAAGG CAGCTGATGTTATCAGCAGGACATGCATCCTGCTGCCAAGG Direct Gain 0 0.833154048584657 0 0.920670986175537 prediction 0.666308097169314 Functional Gain - 21 PSMD2 ENSG00000175166 UTR3 Human protein_coding chr3:184026723 chr3:184026723 . . 0 hm6A_associated_SNPs_89000 0 0 1 2 184026701 184026723 mRNA hsa-miR-370 PSMD2 miRanda miRanda
14034 chr1 25893529 25893529 1 + C A rs372988459 25893529 + 25893509 25893549 41 CGGCCCTGACACGTGATGGACCAAAGCCACCTGCTGCGGGG CGGCCCTGACACGTGATGGAACAAAGCCACCTGCTGCGGGG Direct Gain 0 0.833005873684192 0 0.969506323337555 prediction 0.666011747368384 Functional Gain - 21 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25893529 chr1:25893529 . . 0 hm6A_associated_SNPs_89006 0 0 1 2 25893512 25893533 mRNA hsa-miR-133a LDLRAP1 miRanda miRanda
14034 chr1 25893529 25893529 1 + C A rs372988459 25893529 + 25893509 25893549 41 CGGCCCTGACACGTGATGGACCAAAGCCACCTGCTGCGGGG CGGCCCTGACACGTGATGGAACAAAGCCACCTGCTGCGGGG Direct Gain 0 0.833005873684192 0 0.969506323337555 prediction 0.666011747368384 Functional Gain - 21 LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25893529 chr1:25893529 . . 0 hm6A_associated_SNPs_89006 0 0 1 2 25893512 25893533 mRNA hsa-miR-133b LDLRAP1 miRanda miRanda
14034 chr1 166990983 166990983 1 + G A COAD 166990983 + 166990963 166991003 41 AATTACCCGCTTACTAGAGAGCATTTCCAATTCTTCCAGCA AATTACCCGCTTACTAGAGAACATTTCCAATTCTTCCAGCA Direct Gain 0 0.832973867209908 0 0.725578784942627 prediction 0.665947734419817 Functional Gain - 21 MAEL ENSG00000143194 CDS Human protein_coding chr1:166990983 chr1:166990983 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_89007 0 0 0 2 166990978 166991000 mRNA hsa-miR-7 MAEL miRanda miRanda
14034 chr1 166990983 166990983 1 + G A COAD 166990983 + 166990963 166991003 41 AATTACCCGCTTACTAGAGAGCATTTCCAATTCTTCCAGCA AATTACCCGCTTACTAGAGAACATTTCCAATTCTTCCAGCA Direct Gain 0 0.832973867209908 0 0.725578784942627 prediction 0.665947734419817 Functional Gain - 21 MAEL ENSG00000143194 CDS Human protein_coding chr1:166990983 chr1:166990983 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_89007 0 0 0 2 166990970 166990991 mRNA hsa-miR-203 MAEL miRanda miRanda
14034 chr2 202149611 202149611 1 + T A CESC 202149611 + 202149591 202149631 41 TGACTGCACAGTAGAGCAAATCTATGAGATTTTGAAAATCT TGACTGCACAGTAGAGCAAAACTATGAGATTTTGAAAATCT Direct Gain 0 0.829618480545784 0 0.984583377838135 prediction 0.659236961091569 Functional Gain - 21 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149611 chr2:202149611 nonsynonymous SNV 0.004 3 hm6A_associated_SNPs_89112 0 0 1 4 202149596 202149622 mRNA hsa-miR-216a CASP8 miRanda miRanda
14034 chr2 202149611 202149611 1 + T A CESC 202149611 + 202149591 202149631 41 TGACTGCACAGTAGAGCAAATCTATGAGATTTTGAAAATCT TGACTGCACAGTAGAGCAAAACTATGAGATTTTGAAAATCT Direct Gain 0 0.829618480545784 0 0.984583377838135 prediction 0.659236961091569 Functional Gain - 21 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149611 chr2:202149611 nonsynonymous SNV 0.004 3 hm6A_associated_SNPs_89112 0 0 1 4 202149598 202149618 mRNA hsa-miR-376a CASP8 miRanda miRanda
14034 chr2 202149611 202149611 1 + T A CESC 202149611 + 202149591 202149631 41 TGACTGCACAGTAGAGCAAATCTATGAGATTTTGAAAATCT TGACTGCACAGTAGAGCAAAACTATGAGATTTTGAAAATCT Direct Gain 0 0.829618480545784 0 0.984583377838135 prediction 0.659236961091569 Functional Gain - 21 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149611 chr2:202149611 nonsynonymous SNV 0.004 3 hm6A_associated_SNPs_89112 0 0 1 4 202149596 202149618 mRNA hsa-miR-433 CASP8 miRanda miRanda
14034 chr2 202149611 202149611 1 + T A CESC 202149611 + 202149591 202149631 41 TGACTGCACAGTAGAGCAAATCTATGAGATTTTGAAAATCT TGACTGCACAGTAGAGCAAAACTATGAGATTTTGAAAATCT Direct Gain 0 0.829618480545784 0 0.984583377838135 prediction 0.659236961091569 Functional Gain - 21 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149611 chr2:202149611 nonsynonymous SNV 0.004 3 hm6A_associated_SNPs_89112 0 0 1 4 202149597 202149618 mRNA hsa-miR-376b CASP8 miRanda miRanda
14034 chr7 6063287 6063287 1 - G T SARC 6063287 - 6063267 6063307 41 GAGGGCCGTGTTAAAAGGAGCCAGGTTTTCACAAGACCTCA GAGGGCCGTGTTAAAAGGAGACAGGTTTTCACAAGACCTCA Direct Gain 0 0.828880403641093 0 0.928125023841858 prediction 0.657760807282185 Functional Gain - 21 AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063287 chr7:6063287 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_89141 0 0 0 2 6063283 6063305 mRNA hsa-miR-149 EIF2AK1 miRanda miRanda
14034 chr7 6063287 6063287 1 - G T SARC 6063287 - 6063267 6063307 41 GAGGGCCGTGTTAAAAGGAGCCAGGTTTTCACAAGACCTCA GAGGGCCGTGTTAAAAGGAGACAGGTTTTCACAAGACCTCA Direct Gain 0 0.828880403641093 0 0.928125023841858 prediction 0.657760807282185 Functional Gain - 21 AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063287 chr7:6063287 nonsynonymous SNV 0.994 1 hm6A_associated_SNPs_89141 0 0 0 2 6063280 6063297 mRNA hsa-miR-490-3p EIF2AK1 miRanda miRanda
14034 chr13 113803537 113803537 1 + G A LGG 113803537 + 113803517 113803557 41 GTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCTTCATCAT GTGGACCGCAACAGCTGCAAACTGTCCAGCAGCTTCATCAT Direct Gain 0 0.828303784081402 0 0.999810814857483 prediction 0.656607568162804 Functional Gain - 21 F10 ENSG00000126218 CDS Human protein_coding chr13:113803537 chr13:113803537 synonymous SNV . 0 hm6A_associated_SNPs_89165 0 0 1 2 113803535 113803559 mRNA hsa-miR-143 F10 miRanda miRanda
14034 chr13 113803537 113803537 1 + G A LGG 113803537 + 113803517 113803557 41 GTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCTTCATCAT GTGGACCGCAACAGCTGCAAACTGTCCAGCAGCTTCATCAT Direct Gain 0 0.828303784081402 0 0.999810814857483 prediction 0.656607568162804 Functional Gain - 21 F10 ENSG00000126218 CDS Human protein_coding chr13:113803537 chr13:113803537 synonymous SNV . 0 hm6A_associated_SNPs_89165 0 0 1 2 113803528 113803552 mRNA hsa-miR-372 F10 miRanda miRanda
14034 chr3 20019889 20019889 1 + G A ESCA 20019889 + 20019869 20019909 41 ATGTAAATGAAATATTCATGGCAATAGGTAAGATTAATATC ATGTAAATGAAATATTCATGACAATAGGTAAGATTAATATC Direct Gain 0 0.828209205710708 0 0.0161647796630859 prediction 0.656418411421415 Functional Gain - 21 RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019889 chr3:20019889 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_89170 0 0 0 3 20019889 20019895 mRNA hsa-miR-96 RAB5A miRanda miRanda
14034 chr3 20019889 20019889 1 + G A ESCA 20019889 + 20019869 20019909 41 ATGTAAATGAAATATTCATGGCAATAGGTAAGATTAATATC ATGTAAATGAAATATTCATGACAATAGGTAAGATTAATATC Direct Gain 0 0.828209205710708 0 0.0161647796630859 prediction 0.656418411421415 Functional Gain - 21 RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019889 chr3:20019889 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_89170 0 0 0 3 20019888 20019895 mRNA hsa-miR-182 RAB5A miRanda miRanda
14034 chr3 20019889 20019889 1 + G A ESCA 20019889 + 20019869 20019909 41 ATGTAAATGAAATATTCATGGCAATAGGTAAGATTAATATC ATGTAAATGAAATATTCATGACAATAGGTAAGATTAATATC Direct Gain 0 0.828209205710708 0 0.0161647796630859 prediction 0.656418411421415 Functional Gain - 21 RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019889 chr3:20019889 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_89170 0 0 0 3 20019888 20019895 mRNA hsa-miR-9 RAB5A miRanda miRanda
14034 chr6 42985306 42985306 1 + G A STAD 42985306 + 42985286 42985326 41 GTGAAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACCCTA GTGAAGTCTGCCATCCGTGGACAAGCTCCTGTGGTACCCTA Direct Gain 0 0.827532668455751 0 0.93469226360321 prediction 0.655065336911503 Functional Gain - 21 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985306 chr6:42985306 synonymous SNV . 0 hm6A_associated_SNPs_89190 0 0 1 2 42985295 42985316 mRNA hsa-miR-28-5p KLHDC3 miRanda miRanda
14034 chr6 42985306 42985306 1 + G A STAD 42985306 + 42985286 42985326 41 GTGAAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACCCTA GTGAAGTCTGCCATCCGTGGACAAGCTCCTGTGGTACCCTA Direct Gain 0 0.827532668455751 0 0.93469226360321 prediction 0.655065336911503 Functional Gain - 21 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985306 chr6:42985306 synonymous SNV . 0 hm6A_associated_SNPs_89190 0 0 1 2 42985294 42985316 mRNA hsa-miR-708 KLHDC3 miRanda miRanda
14034 chr7 75933408 75933408 1 + T A SKCM 75933408 + 75933388 75933428 41 AGCCACGCAGTCCAACGAGATCACCATCCCAGTCACCTTCG AGCCACGCAGTCCAACGAGAACACCATCCCAGTCACCTTCG Direct Gain 0 0.825253790734514 0 0.957133233547211 prediction 0.650507581469029 Functional Gain - 21 HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933408 chr7:75933408 nonsynonymous SNV 0.541 5 hm6A_associated_SNPs_89254 0 0 0 1 75933403 75933424 mRNA hsa-miR-134 HSPB1 miRanda miRanda
14034 chr11 4113029 4113029 1 + G A rs137935269 4113029 + 4113009 4113049 41 AGAAGCCTCTTAAGAAGTAGGCAGGATGGGGTGGCAGTAAA AGAAGCCTCTTAAGAAGTAGACAGGATGGGGTGGCAGTAAA Direct Gain 0 0.824243989509382 0 0.930794239044189 prediction 0.648487979018764 Functional Gain - 21 STIM1 ENSG00000167323 UTR3 Human protein_coding chr11:4113029 chr11:4113029 . . 0 hm6A_associated_SNPs_89284 0 0 1 1 4113029 4113054 mRNA hsa-miR-211 STIM1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150858 56150880 mRNA hsa-miR-96 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150858 56150880 mRNA hsa-miR-182 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150840 56150861 mRNA hsa-miR-204 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150840 56150861 mRNA hsa-miR-211 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150840 56150862 mRNA hsa-miR-135a KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150842 56150863 mRNA hsa-miR-365 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150848 56150871 mRNA hsa-miR-374a KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150846 56150867 mRNA hsa-miR-381 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150840 56150862 mRNA hsa-miR-135b KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150854 56150872 mRNA hsa-miR-410 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150846 56150867 mRNA hsa-miR-300 KTN1 miRanda miRanda
14034 chr14 56150858 56150858 1 + G A rs377030594 56150858 + 56150838 56150878 41 TTCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCA TTCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCA Direct Gain 0 0.824173470504132 0 0.891222715377808 prediction 0.648346941008265 Functional Gain - 21 KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150858 chr14:56150858 . . 0 hm6A_associated_SNPs_89285 0 0 1 12 56150852 56150871 mRNA hsa-miR-374b KTN1 miRanda miRanda
14034 chrX 118587017 118587017 1 + C A UCEC 118587017 + 118586997 118587037 41 GAAAACCGAAGCCTAAAAAACCAACTCTATAAAATGGAATG GAAAACCGAAGCCTAAAAAAACAACTCTATAAAATGGAATG Direct Gain 0 0.82355450777181 0 0.95978045463562 prediction 0.647109015543621 Functional Gain - 21 SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118587017 chrX:118587017 nonsynonymous SNV 0.950 1 hm6A_associated_SNPs_89301 0 0 1 1 118586999 118587023 mRNA hsa-miR-140-5p SLC25A43 miRanda miRanda
14034 chr3 158541262 158541262 1 + C A COAD 158541262 + 158541242 158541282 41 TGCTTGCCTGTGCATTGTGGCCAATGGTGGCATTTGTAGTT TGCTTGCCTGTGCATTGTGGACAATGGTGGCATTTGTAGTT Direct Gain 0 0.823028023131143 0 0.703822791576385 prediction 0.646056046262286 Functional Gain - 21 MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158541262 chr3:158541262 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_89317 0 0 1 1 158541242 158541266 mRNA hsa-miR-96 MFSD1 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176325 150176347 mRNA hsa-miR-302a TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176325 150176347 mRNA hsa-miR-302b TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176325 150176347 mRNA hsa-miR-302c TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176325 150176347 mRNA hsa-miR-302d TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176326 150176347 mRNA hsa-miR-372 TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176324 150176347 mRNA hsa-miR-373 TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176327 150176347 mRNA hsa-miR-520e TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176324 150176347 mRNA hsa-miR-520a-3p TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176327 150176347 mRNA hsa-miR-520b TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176326 150176347 mRNA hsa-miR-520c-3p TSC22D2 miRanda miRanda
14034 chr3 150176328 150176328 1 + G A UCEC 150176328 + 150176308 150176348 41 CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCT CCCAACTCCCAACCCAACAGACCAATCCTGGTAGCACTTCT Direct Gain 0 0.822329672938659 0 0.92556357383728 prediction 0.644659345877318 Functional Gain - 21 TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176328 chr3:150176328 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89338 0 0 1 11 150176324 150176347 mRNA hsa-miR-520d-3p TSC22D2 miRanda miRanda
14034 chr20 61598783 61598783 1 + G A SKCM 61598783 + 61598763 61598803 41 GCCATCATCAGCAACCTGGGGCTGTGCACCTTCCTGGTGTT GCCATCATCAGCAACCTGGGACTGTGCACCTTCCTGGTGTT Direct Gain 0 0.819772961600839 0 0.991564631462097 prediction 0.639545923201679 Functional Gain - 21 SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61598783 chr20:61598783 synonymous SNV . 0 hm6A_associated_SNPs_89423 0 0 1 2 61598767 61598795 mRNA hsa-miR-18a SLC17A9 miRanda miRanda
14034 chr20 61598783 61598783 1 + G A SKCM 61598783 + 61598763 61598803 41 GCCATCATCAGCAACCTGGGGCTGTGCACCTTCCTGGTGTT GCCATCATCAGCAACCTGGGACTGTGCACCTTCCTGGTGTT Direct Gain 0 0.819772961600839 0 0.991564631462097 prediction 0.639545923201679 Functional Gain - 21 SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61598783 chr20:61598783 synonymous SNV . 0 hm6A_associated_SNPs_89423 0 0 1 2 61598774 61598795 mRNA hsa-miR-18b SLC17A9 miRanda miRanda
14034 chrX 56592979 56592979 1 + G A rs189353361 56592979 + 56592959 56592999 41 TCAGTGAAAATGTTGGCTAGGCAAGTTCAGTTAAAATATAG TCAGTGAAAATGTTGGCTAGACAAGTTCAGTTAAAATATAG Direct Gain 0 0.819209021703513 0 0.487727552652359 prediction 0.638418043407026 Functional Gain - 21 UBQLN2 ENSG00000188021 UTR3 Human protein_coding chrX:56592979 chrX:56592979 . . 0 hm6A_associated_SNPs_89437 0 0 1 1 56592975 56592997 mRNA hsa-miR-590-3p UBQLN2 miRanda miRanda
14034 chr12 58122127 58122127 1 + C A UCEC 58122127 + 58122107 58122147 41 TATAAATATTTCTTAAACTACCAAAGGATTTTAGTTTCCAC TATAAATATTTCTTAAACTAACAAAGGATTTTAGTTTCCAC Direct Gain 0 0.818723313946626 0 0.00360402464866638 prediction 0.637446627893251 Functional Gain - 21 AGAP2 ENSG00000135439 CDS Human protein_coding chr12:58122127 chr12:58122127 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89452 0 0 0 3 58122108 58122130 mRNA hsa-miR-196a LOC100130776 miRanda miRanda
14034 chr12 58122127 58122127 1 + C A UCEC 58122127 + 58122107 58122147 41 TATAAATATTTCTTAAACTACCAAAGGATTTTAGTTTCCAC TATAAATATTTCTTAAACTAACAAAGGATTTTAGTTTCCAC Direct Gain 0 0.818723313946626 0 0.00360402464866638 prediction 0.637446627893251 Functional Gain - 21 AGAP2 ENSG00000135439 CDS Human protein_coding chr12:58122127 chr12:58122127 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89452 0 0 0 3 58122110 58122133 mRNA hsa-miR-9 LOC100130776 miRanda miRanda
14034 chr12 58122127 58122127 1 + C A UCEC 58122127 + 58122107 58122147 41 TATAAATATTTCTTAAACTACCAAAGGATTTTAGTTTCCAC TATAAATATTTCTTAAACTAACAAAGGATTTTAGTTTCCAC Direct Gain 0 0.818723313946626 0 0.00360402464866638 prediction 0.637446627893251 Functional Gain - 21 AGAP2 ENSG00000135439 CDS Human protein_coding chr12:58122127 chr12:58122127 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89452 0 0 0 3 58122109 58122130 mRNA hsa-miR-196b LOC100130776 miRanda miRanda
14034 chr15 48063240 48063240 1 + C A GBM 48063240 + 48063220 48063260 41 TCATGGGCATATCCCCAGTGCCATTGTTCTTCCAAATGCTA TCATGGGCATATCCCCAGTGACATTGTTCTTCCAAATGCTA Direct Gain 0 0.816735837077252 0 0.984737277030945 prediction 0.633471674154504 Functional Gain - 21 SEMA6D ENSG00000137872 CDS Human protein_coding chr15:48063240 chr15:48063240 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_89519 0 0 1 1 48063223 48063244 mRNA hsa-miR-183 SEMA6D miRanda miRanda
14034 chr17 48437521 48437521 1 + G A CESC 48437521 + 48437501 48437541 41 TGAGCAGCTTCTGGTCCGTGGCTGGACTGTGTGCCATAGGC TGAGCAGCTTCTGGTCCGTGACTGGACTGTGTGCCATAGGC Direct Gain 0 0.814901624039801 0 0.858813226222992 prediction 0.629803248079602 Functional Gain - 21 XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48437521 chr17:48437521 nonsynonymous SNV 0.996 1 hm6A_associated_SNPs_89572 0 0 1 1 48437516 48437538 mRNA hsa-miR-183 XYLT2 miRanda miRanda
14034 chr11 6415235 6415235 1 + G A STAD 6415235 + 6415215 6415255 41 CGCTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACCTAC CGCTGGCTGTAGCCTTCCTGACACCCAGTGCAACTACCTAC Direct Gain 0 0.814520436689185 0 0.117351621389389 prediction 0.629040873378371 Functional Gain - 21 SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415235 chr11:6415235 nonsynonymous SNV 0.993 3 hm6A_associated_SNPs_89588 0 0 1 2 6415234 6415254 mRNA hsa-miR-196a SMPD1 miRanda miRanda
14034 chr11 6415235 6415235 1 + G A STAD 6415235 + 6415215 6415255 41 CGCTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACCTAC CGCTGGCTGTAGCCTTCCTGACACCCAGTGCAACTACCTAC Direct Gain 0 0.814520436689185 0 0.117351621389389 prediction 0.629040873378371 Functional Gain - 21 SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415235 chr11:6415235 nonsynonymous SNV 0.993 3 hm6A_associated_SNPs_89588 0 0 1 2 6415231 6415254 mRNA hsa-miR-196b SMPD1 miRanda miRanda
14034 chr4 27024576 27024576 1 + G A rs570017447 27024576 + 27024556 27024596 41 AATGGAGAGAAAAGCAAAAAGCCATCAAAAATCAAAAGCCT AATGGAGAGAAAAGCAAAAAACCATCAAAAATCAAAAGCCT Direct Gain 0 0.814373417191048 0 0.978381872177124 prediction 0.628746834382096 Functional Gain - 21 STIM2 ENSG00000109689 CDS Human protein_coding chr4:27024576 chr4:27024576 synonymous SNV . 0 hm6A_associated_SNPs_89593 0 0 0 5 27024556 27024576 mRNA hsa-miR-129-5p STIM2 miRanda miRanda
14034 chr4 27024576 27024576 1 + G A rs570017447 27024576 + 27024556 27024596 41 AATGGAGAGAAAAGCAAAAAGCCATCAAAAATCAAAAGCCT AATGGAGAGAAAAGCAAAAAACCATCAAAAATCAAAAGCCT Direct Gain 0 0.814373417191048 0 0.978381872177124 prediction 0.628746834382096 Functional Gain - 21 STIM2 ENSG00000109689 CDS Human protein_coding chr4:27024576 chr4:27024576 synonymous SNV . 0 hm6A_associated_SNPs_89593 0 0 0 5 27024559 27024581 mRNA hsa-miR-135a STIM2 miRanda miRanda
14034 chr4 27024576 27024576 1 + G A rs570017447 27024576 + 27024556 27024596 41 AATGGAGAGAAAAGCAAAAAGCCATCAAAAATCAAAAGCCT AATGGAGAGAAAAGCAAAAAACCATCAAAAATCAAAAGCCT Direct Gain 0 0.814373417191048 0 0.978381872177124 prediction 0.628746834382096 Functional Gain - 21 STIM2 ENSG00000109689 CDS Human protein_coding chr4:27024576 chr4:27024576 synonymous SNV . 0 hm6A_associated_SNPs_89593 0 0 0 5 27024575 27024598 mRNA hsa-miR-135a STIM2 miRanda miRanda
14034 chr4 27024576 27024576 1 + G A rs570017447 27024576 + 27024556 27024596 41 AATGGAGAGAAAAGCAAAAAGCCATCAAAAATCAAAAGCCT AATGGAGAGAAAAGCAAAAAACCATCAAAAATCAAAAGCCT Direct Gain 0 0.814373417191048 0 0.978381872177124 prediction 0.628746834382096 Functional Gain - 21 STIM2 ENSG00000109689 CDS Human protein_coding chr4:27024576 chr4:27024576 synonymous SNV . 0 hm6A_associated_SNPs_89593 0 0 0 5 27024557 27024581 mRNA hsa-miR-135b STIM2 miRanda miRanda
14034 chr4 27024576 27024576 1 + G A rs570017447 27024576 + 27024556 27024596 41 AATGGAGAGAAAAGCAAAAAGCCATCAAAAATCAAAAGCCT AATGGAGAGAAAAGCAAAAAACCATCAAAAATCAAAAGCCT Direct Gain 0 0.814373417191048 0 0.978381872177124 prediction 0.628746834382096 Functional Gain - 21 STIM2 ENSG00000109689 CDS Human protein_coding chr4:27024576 chr4:27024576 synonymous SNV . 0 hm6A_associated_SNPs_89593 0 0 0 5 27024575 27024598 mRNA hsa-miR-135b STIM2 miRanda miRanda
14034 chr12 121014433 121014433 1 + G A UCEC 121014433 + 121014413 121014453 41 AGAAAAAAACAGAAACAGAAGCTCCTGTTCAGCACCTCAGT AGAAAAAAACAGAAACAGAAACTCCTGTTCAGCACCTCAGT Direct Gain 0 0.813398788682857 0 0.0247353315353394 prediction 0.626797577365714 Functional Gain - 21 RNF10 ENSG00000022840 CDS Human protein_coding chr12:121014433 chr12:121014433 synonymous SNV . 0 hm6A_associated_SNPs_89624 0 0 1 2 121014417 121014439 mRNA hsa-miR-28-5p RNF10 miRanda miRanda
14034 chr12 121014433 121014433 1 + G A UCEC 121014433 + 121014413 121014453 41 AGAAAAAAACAGAAACAGAAGCTCCTGTTCAGCACCTCAGT AGAAAAAAACAGAAACAGAAACTCCTGTTCAGCACCTCAGT Direct Gain 0 0.813398788682857 0 0.0247353315353394 prediction 0.626797577365714 Functional Gain - 21 RNF10 ENSG00000022840 CDS Human protein_coding chr12:121014433 chr12:121014433 synonymous SNV . 0 hm6A_associated_SNPs_89624 0 0 1 2 121014417 121014439 mRNA hsa-miR-708 RNF10 miRanda miRanda
14034 chr7 102953504 102953504 1 + G A SKCM 102953504 + 102953484 102953524 41 TTTCAAAGCTTGTTCCAAAAGCTTCTGTTCTTCTGTTGTCC TTTCAAAGCTTGTTCCAAAAACTTCTGTTCTTCTGTTGTCC Direct Gain 0 0.811890173492478 0 0.00884369015693665 prediction 0.623780346984955 Functional Gain - 21 DNAJC2 ENSG00000105821 CDS Human protein_coding chr7:102953504 chr7:102953504 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_89677 0 0 1 1 102953503 102953527 mRNA hsa-miR-182 PMPCB miRanda miRanda
14034 chr5 61923044 61923044 1 + G A UCEC 61923044 + 61923024 61923064 41 TCATCTACGAGAAGCTCAAGGCACAGCAGGAGATGCTAGGA TCATCTACGAGAAGCTCAAGACACAGCAGGAGATGCTAGGA Direct Gain 0 0.808309407744311 0 0.955873012542725 prediction 0.616618815488623 Functional Gain - 21 IPO11 ENSG00000086200 CDS Human protein_coding chr5:61923044 chr5:61923044 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_89783 0 0 1 1 61923032 61923054 mRNA hsa-miR-370 IPO11 miRanda miRanda
14034 chr18 48573554 48573554 1 + G A HNSC 48573554 + 48573534 48573574 41 ATTGAAAGTTTGGTAAAGAAGCTGAAGGAGAAAAAAGATGA ATTGAAAGTTTGGTAAAGAAACTGAAGGAGAAAAAAGATGA Direct Gain 0 0.808002543240608 0 0.973094582557678 prediction 0.616005086481215 Functional Gain - 21 SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48573554 chr18:48573554 synonymous SNV . 0 hm6A_associated_SNPs_89794 0 0 1 1 48573541 48573562 mRNA hsa-miR-205 SMAD4 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943617 1943638 mRNA hsa-miR-17 DPH1 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943617 1943638 mRNA hsa-miR-20a DPH1 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943617 1943638 mRNA hsa-miR-93 DPH1 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943617 1943638 mRNA hsa-miR-106a DPH1 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943619 1943638 mRNA hsa-miR-106b DPH1 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943617 1943638 mRNA hsa-miR-20b DPH1 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943617 1943638 mRNA hsa-miR-519d DPH1 miRanda miRanda
14034 chr17 1943631 1943631 1 + G A PAAD 1943631 + 1943611 1943651 41 GTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCA GTCCTGGGGCCTTATTCTGGACACTTTGGGCCGCCAGGGCA Direct Gain 0 0.804998365052327 0 0.893024802207947 prediction 0.609996730104654 Functional Gain - 21 DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943631 chr17:1943631 nonsynonymous SNV 0.998 4 hm6A_associated_SNPs_89884 0 0 1 8 1943628 1943652 mRNA hsa-miR-874 DPH1 miRanda miRanda
14034 chr3 32766999 32766999 1 + G A KIRP 32766999 + 32766979 32767019 41 TTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATAT TTGCATCCATTTTGCCATGAACAAGCACAATTTGGGAATAT Direct Gain 0 0.804921514097993 0 0.732827603816986 prediction 0.609843028195986 Functional Gain - 21 CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32766999 chr3:32766999 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_89886 0 0 0 1 32766988 32767008 mRNA hsa-miR-218 CNOT10 miRanda miRanda
14034 chr10 75542269 75542269 1 + C A rs537894036 75542269 + 75542249 75542289 41 AGAAGTAATGATTCTCCCTGCCTTTTGCTAGGAAAGGCCCT AGAAGTAATGATTCTCCCTGACTTTTGCTAGGAAAGGCCCT Direct Gain 0 0.802050438905483 0 0.57190078496933 prediction 0.604100877810967 Functional Gain - 21 CHCHD1 ENSG00000172586 UTR3 Human protein_coding chr10:75542269 chr10:75542269 . . 0 hm6A_associated_SNPs_89976 0 0 1 1 75542264 75542283 mRNA hsa-miR-384 CHCHD1 miRanda miRanda
14034 chr10 75558926 75558926 1 + C A UCEC 75558926 + 75558906 75558946 41 AGGGGCTACAAGCTGTAGTGCCAGTGGGATCAGGGCAGGTG AGGGGCTACAAGCTGTAGTGACAGTGGGATCAGGGCAGGTG Direct Gain 0 0.797844080071186 0 0.361249536275864 prediction 0.595688160142373 Functional Gain - 21 ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75558926 chr10:75558926 nonsynonymous SNV 0.998 1 hm6A_associated_SNPs_90113 0 0 1 1 75558920 75558943 mRNA hsa-miR-874 KIAA0913 miRanda miRanda
14034 chr12 6838591 6838591 1 + C A rs144729591 6838591 + 6838571 6838611 41 CCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGG CCAGCGCCAGGACCTCAGTGACATTGCCCGAACCCTGCAGG Direct Gain 0 0.797339768652759 0 0.942407369613647 prediction 0.594679537305518 Functional Gain - 21 COPS7A ENSG00000111652 CDS Human protein_coding chr12:6838591 chr12:6838591 nonsynonymous SNV 0.982 1 hm6A_associated_SNPs_90132 0 0 1 1 6838574 6838595 mRNA hsa-miR-183 COPS7A miRanda miRanda
14034 chr17 42225348 42225348 1 + G A STAD 42225348 + 42225328 42225368 41 GTGCAGGCACAGTCCTCCAGGCTGCTGCTGTTACACCCCAC GTGCAGGCACAGTCCTCCAGACTGCTGCTGTTACACCCCAC Direct Gain 0 0.797106001496017 0 0.763912916183472 prediction 0.594212002992035 Functional Gain - 21 C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225348 chr17:42225348 synonymous SNV . 0 hm6A_associated_SNPs_90141 0 0 0 1 42225341 42225362 mRNA hsa-miR-194 C17orf53 miRanda miRanda
14034 chr9 2192877 2192877 1 + C A rs75720779 2192877 + 2192857 2192897 41 AAACTAGCTTTAGGATAGTGCCAGACAAACATATGATATCA AAACTAGCTTTAGGATAGTGACAGACAAACATATGATATCA Direct Gain 0 0.794600983626135 0 0.191906571388245 prediction 0.58920196725227 Functional Gain - 21 SMARCA2 ENSG00000080503 UTR3 Human protein_coding chr9:2192877 chr9:2192877 . . 0 hm6A_associated_SNPs_90213 0 0 1 5 2192859 2192881 mRNA hsa-miR-96 SMARCA2 miRanda miRanda
14034 chr9 2192877 2192877 1 + C A rs75720779 2192877 + 2192857 2192897 41 AAACTAGCTTTAGGATAGTGCCAGACAAACATATGATATCA AAACTAGCTTTAGGATAGTGACAGACAAACATATGATATCA Direct Gain 0 0.794600983626135 0 0.191906571388245 prediction 0.58920196725227 Functional Gain - 21 SMARCA2 ENSG00000080503 UTR3 Human protein_coding chr9:2192877 chr9:2192877 . . 0 hm6A_associated_SNPs_90213 0 0 1 5 2192858 2192881 mRNA hsa-miR-183 SMARCA2 miRanda miRanda
14034 chr9 2192877 2192877 1 + C A rs75720779 2192877 + 2192857 2192897 41 AAACTAGCTTTAGGATAGTGCCAGACAAACATATGATATCA AAACTAGCTTTAGGATAGTGACAGACAAACATATGATATCA Direct Gain 0 0.794600983626135 0 0.191906571388245 prediction 0.58920196725227 Functional Gain - 21 SMARCA2 ENSG00000080503 UTR3 Human protein_coding chr9:2192877 chr9:2192877 . . 0 hm6A_associated_SNPs_90213 0 0 1 5 2192871 2192892 mRNA hsa-miR-190 SMARCA2 miRanda miRanda
14034 chr9 2192877 2192877 1 + C A rs75720779 2192877 + 2192857 2192897 41 AAACTAGCTTTAGGATAGTGCCAGACAAACATATGATATCA AAACTAGCTTTAGGATAGTGACAGACAAACATATGATATCA Direct Gain 0 0.794600983626135 0 0.191906571388245 prediction 0.58920196725227 Functional Gain - 21 SMARCA2 ENSG00000080503 UTR3 Human protein_coding chr9:2192877 chr9:2192877 . . 0 hm6A_associated_SNPs_90213 0 0 1 5 2192858 2192881 mRNA hsa-miR-1271 SMARCA2 miRanda miRanda
14034 chr9 2192877 2192877 1 + C A rs75720779 2192877 + 2192857 2192897 41 AAACTAGCTTTAGGATAGTGCCAGACAAACATATGATATCA AAACTAGCTTTAGGATAGTGACAGACAAACATATGATATCA Direct Gain 0 0.794600983626135 0 0.191906571388245 prediction 0.58920196725227 Functional Gain - 21 SMARCA2 ENSG00000080503 UTR3 Human protein_coding chr9:2192877 chr9:2192877 . . 0 hm6A_associated_SNPs_90213 0 0 1 5 2192874 2192892 mRNA hsa-miR-190b SMARCA2 miRanda miRanda
14034 chr4 148406958 148406958 1 + G A UCEC 148406958 + 148406938 148406978 41 TGATTTCACCACTTTTCGTGGCACAGAGCTCAGCTTCCTGG TGATTTCACCACTTTTCGTGACACAGAGCTCAGCTTCCTGG Direct Gain 0 0.793487808702268 0 0.00499564409255981 prediction 0.586975617404536 Functional Gain - 21 EDNRA ENSG00000151617 CDS Human protein_coding chr4:148406958 chr4:148406958 nonsynonymous SNV 0.042 4 hm6A_associated_SNPs_90245 0 0 1 1 148406948 148406971 mRNA hsa-miR-149 EDNRA miRanda miRanda
14034 chr16 66920138 66920138 1 + G A rs193235873 66920138 + 66920118 66920158 41 GAGAATAAAGAACTTCAGGAGCTTCTTAGGTCTTGCCACAA GAGAATAAAGAACTTCAGGAACTTCTTAGGTCTTGCCACAA Direct Gain 0 0.791910872669874 0 0.74928867816925 prediction 0.583821745339748 Functional Gain - 21 PDP2 ENSG00000172840 UTR3 Human protein_coding chr16:66920138 chr16:66920138 . . 0 hm6A_associated_SNPs_90308 0 0 1 1 66920137 66920155 mRNA hsa-miR-31 PDP2 miRanda miRanda
14034 chr19 47548515 47548515 1 + G A COAD 47548515 + 47548495 47548535 41 CGAGGCCCCCCAGACCCAGGGCAAACGCATCAAAGTGGAGC CGAGGCCCCCCAGACCCAGGACAAACGCATCAAAGTGGAGC Direct Gain 0 0.788325623113821 0 0.973355889320374 prediction 0.576651246227642 Functional Gain - 21 NPAS1 ENSG00000130751 CDS Human protein_coding chr19:47548515 chr19:47548515 nonsynonymous SNV 0.720 1 hm6A_associated_SNPs_90432 0 0 0 1 47548496 47548518 mRNA hsa-miR-874 NPAS1 miRanda miRanda
14034 chr16 5135268 5135268 1 - C T rs149110534 5135268 - 5135248 5135288 41 TGCAGCTGCCACATCCCTGGGCTTACGGTGCAGCAGGTGCT TGCAGCTGCCACATCCCTGGACTTACGGTGCAGCAGGTGCT Direct Gain 0 0.787730489766023 0 0.998727381229401 prediction 0.575460979532047 Functional Gain - 21 ALG1;EEF2KMT ENSG00000033011;ENSG00000118894 UTR3 Human other chr16:5135268 chr16:5135268 . . 0 hm6A_associated_SNPs_90448 0 0 0 1 5135251 5135272 mRNA hsa-miR-370 FAM86A miRanda miRanda
14034 chr19 52793356 52793356 1 + G A HNSC 52793356 + 52793336 52793376 41 AGAAGCAAAGCAGGAAACAAGCCTATTACAAATCAACTTGG AGAAGCAAAGCAGGAAACAAACCTATTACAAATCAACTTGG Direct Gain 0 0.786154571716124 0 0.473430871963501 prediction 0.572309143432249 Functional Gain - 21 ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52793356 chr19:52793356 synonymous SNV . 0 hm6A_associated_SNPs_90494 0 0 1 3 52793338 52793362 mRNA hsa-miR-135a ZNF766 miRanda miRanda
14034 chr19 52793356 52793356 1 + G A HNSC 52793356 + 52793336 52793376 41 AGAAGCAAAGCAGGAAACAAGCCTATTACAAATCAACTTGG AGAAGCAAAGCAGGAAACAAACCTATTACAAATCAACTTGG Direct Gain 0 0.786154571716124 0 0.473430871963501 prediction 0.572309143432249 Functional Gain - 21 ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52793356 chr19:52793356 synonymous SNV . 0 hm6A_associated_SNPs_90494 0 0 1 3 52793353 52793375 mRNA hsa-miR-382 ZNF766 miRanda miRanda
14034 chr19 52793356 52793356 1 + G A HNSC 52793356 + 52793336 52793376 41 AGAAGCAAAGCAGGAAACAAGCCTATTACAAATCAACTTGG AGAAGCAAAGCAGGAAACAAACCTATTACAAATCAACTTGG Direct Gain 0 0.786154571716124 0 0.473430871963501 prediction 0.572309143432249 Functional Gain - 21 ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52793356 chr19:52793356 synonymous SNV . 0 hm6A_associated_SNPs_90494 0 0 1 3 52793338 52793362 mRNA hsa-miR-135b ZNF766 miRanda miRanda
14034 chr2 43455356 43455356 1 + G A rs184713523 43455356 + 43455336 43455376 41 TTATTCATCTCTCACCTTTGGCAAGGTGCAAATGATATCTG TTATTCATCTCTCACCTTTGACAAGGTGCAAATGATATCTG Direct Gain 0 0.78490275569694 0 0.041379451751709 prediction 0.569805511393879 Functional Gain - 21 LINC01126 ENSG00000115970 intronic Human protein_coding chr2:43455356 chr2:43455356 . . 0 hm6A_associated_SNPs_90537 0 0 0 5 43455355 43455375 lncRNA hsa-miR-144-5p LINC01126 miRanda starBase2
14034 chr2 43455356 43455356 1 + G A rs184713523 43455356 + 43455336 43455376 41 TTATTCATCTCTCACCTTTGGCAAGGTGCAAATGATATCTG TTATTCATCTCTCACCTTTGACAAGGTGCAAATGATATCTG Direct Gain 0 0.78490275569694 0 0.041379451751709 prediction 0.569805511393879 Functional Gain - 21 LINC01126 ENSG00000115970 intronic Human protein_coding chr2:43455356 chr2:43455356 . . 0 hm6A_associated_SNPs_90537 0 0 0 5 43455346 43455363 lncRNA hsa-miR-3200-3p LINC01126 miRanda starBase2
14034 chr2 43455356 43455356 1 + G A rs184713523 43455356 + 43455336 43455376 41 TTATTCATCTCTCACCTTTGGCAAGGTGCAAATGATATCTG TTATTCATCTCTCACCTTTGACAAGGTGCAAATGATATCTG Direct Gain 0 0.78490275569694 0 0.041379451751709 prediction 0.569805511393879 Functional Gain - 21 LINC01126 ENSG00000115970 intronic Human protein_coding chr2:43455356 chr2:43455356 . . 0 hm6A_associated_SNPs_90537 0 0 0 5 43455345 43455366 lncRNA hsa-miR-500a-3p LINC01126 miRanda starBase2
14034 chr2 43455356 43455356 1 + G A rs184713523 43455356 + 43455336 43455376 41 TTATTCATCTCTCACCTTTGGCAAGGTGCAAATGATATCTG TTATTCATCTCTCACCTTTGACAAGGTGCAAATGATATCTG Direct Gain 0 0.78490275569694 0 0.041379451751709 prediction 0.569805511393879 Functional Gain - 21 LINC01126 ENSG00000115970 intronic Human protein_coding chr2:43455356 chr2:43455356 . . 0 hm6A_associated_SNPs_90537 0 0 0 5 43455349 43455371 lncRNA hsa-miR-579-3p LINC01126 miRanda starBase2
14034 chr2 43455356 43455356 1 + G A rs184713523 43455356 + 43455336 43455376 41 TTATTCATCTCTCACCTTTGGCAAGGTGCAAATGATATCTG TTATTCATCTCTCACCTTTGACAAGGTGCAAATGATATCTG Direct Gain 0 0.78490275569694 0 0.041379451751709 prediction 0.569805511393879 Functional Gain - 21 LINC01126 ENSG00000115970 intronic Human protein_coding chr2:43455356 chr2:43455356 . . 0 hm6A_associated_SNPs_90537 0 0 0 5 43455351 43455371 lncRNA hsa-miR-664b-3p LINC01126 miRanda starBase2
14034 chr1 40525076 40525076 1 + G A STAD 40525076 + 40525056 40525096 41 GGGCAGTGGGCCGCCTGGAGGCAGTATCTCATACCTCTGAC GGGCAGTGGGCCGCCTGGAGACAGTATCTCATACCTCTGAC Direct Gain 0 0.784086085108342 0 0.32728898525238 prediction 0.568172170216684 Functional Gain - 21 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525076 chr1:40525076 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_90562 0 0 1 2 40525065 40525086 mRNA hsa-miR-146a CAP1 miRanda miRanda
14034 chr1 40525076 40525076 1 + G A STAD 40525076 + 40525056 40525096 41 GGGCAGTGGGCCGCCTGGAGGCAGTATCTCATACCTCTGAC GGGCAGTGGGCCGCCTGGAGACAGTATCTCATACCTCTGAC Direct Gain 0 0.784086085108342 0 0.32728898525238 prediction 0.568172170216684 Functional Gain - 21 CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525076 chr1:40525076 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_90562 0 0 1 2 40525074 40525093 mRNA hsa-miR-202 CAP1 miRanda miRanda
14034 chr2 172338658 172338658 1 + G A rs3731979 172338658 + 172338638 172338678 41 CTTTAGAATGTTAAATAAAGGCAACCCAAGTAAAGGGAGAA CTTTAGAATGTTAAATAAAGACAACCCAAGTAAAGGGAGAA Direct Gain 0 0.783626882339799 0 0.0360952019691467 prediction 0.567253764679597 Functional Gain - 21 DCAF17 ENSG00000115827 UTR3 Human protein_coding chr2:172338658 chr2:172338658 . . 0 hm6A_associated_SNPs_90578 0 0 0 2 172338655 172338676 mRNA hsa-miR-204 DCAF17 miRanda miRanda
14034 chr2 172338658 172338658 1 + G A rs3731979 172338658 + 172338638 172338678 41 CTTTAGAATGTTAAATAAAGGCAACCCAAGTAAAGGGAGAA CTTTAGAATGTTAAATAAAGACAACCCAAGTAAAGGGAGAA Direct Gain 0 0.783626882339799 0 0.0360952019691467 prediction 0.567253764679597 Functional Gain - 21 DCAF17 ENSG00000115827 UTR3 Human protein_coding chr2:172338658 chr2:172338658 . . 0 hm6A_associated_SNPs_90578 0 0 0 2 172338655 172338676 mRNA hsa-miR-211 DCAF17 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676863 + 69676843 69676883 41 ACAATTATTTTTAAACACTGGCATTTTCCAAAACTGTGGCA ACAATTATTTTTAAACACTGACATTTTCCAAAACTGTGGCA Direct Gain 0 0.78289677040968 0 0.896046876907349 prediction 0.56579354081936 Functional Gain - 21 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676863 chr10:69676863 . . 0 hm6A_associated_SNPs_90597 0 0 1 4 69676841 69676864 mRNA hsa-miR-199a-5p SIRT1 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676863 + 69676843 69676883 41 ACAATTATTTTTAAACACTGGCATTTTCCAAAACTGTGGCA ACAATTATTTTTAAACACTGACATTTTCCAAAACTGTGGCA Direct Gain 0 0.78289677040968 0 0.896046876907349 prediction 0.56579354081936 Functional Gain - 21 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676863 chr10:69676863 . . 0 hm6A_associated_SNPs_90597 0 0 1 4 69676843 69676865 mRNA hsa-miR-34a SIRT1 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676863 + 69676843 69676883 41 ACAATTATTTTTAAACACTGGCATTTTCCAAAACTGTGGCA ACAATTATTTTTAAACACTGACATTTTCCAAAACTGTGGCA Direct Gain 0 0.78289677040968 0 0.896046876907349 prediction 0.56579354081936 Functional Gain - 21 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676863 chr10:69676863 . . 0 hm6A_associated_SNPs_90597 0 0 1 4 69676841 69676864 mRNA hsa-miR-199b-5p SIRT1 miRanda miRanda
14034 chr10 69676863 69676863 1 + G A rs544488472 69676863 + 69676843 69676883 41 ACAATTATTTTTAAACACTGGCATTTTCCAAAACTGTGGCA ACAATTATTTTTAAACACTGACATTTTCCAAAACTGTGGCA Direct Gain 0 0.78289677040968 0 0.896046876907349 prediction 0.56579354081936 Functional Gain - 21 SIRT1 ENSG00000096717 UTR3 Human protein_coding chr10:69676863 chr10:69676863 . . 0 hm6A_associated_SNPs_90597 0 0 1 4 69676843 69676865 mRNA hsa-miR-34c-5p SIRT1 miRanda miRanda
14034 chr12 102117041 102117041 1 + G A PAAD 102117041 + 102117021 102117061 41 GCAACTGATGTGTTTGAAAAGCATCCTTGTCTTTATATCCT GCAACTGATGTGTTTGAAAAACATCCTTGTCTTTATATCCT Direct Gain 0 0.78113208438777 0 0.304494500160217 prediction 0.562264168775539 Functional Gain - 21 CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102117041 chr12:102117041 synonymous SNV . 0 hm6A_associated_SNPs_90653 0 0 1 2 102117026 102117049 mRNA hsa-miR-18a CHPT1 miRanda miRanda
14034 chr12 102117041 102117041 1 + G A PAAD 102117041 + 102117021 102117061 41 GCAACTGATGTGTTTGAAAAGCATCCTTGTCTTTATATCCT GCAACTGATGTGTTTGAAAAACATCCTTGTCTTTATATCCT Direct Gain 0 0.78113208438777 0 0.304494500160217 prediction 0.562264168775539 Functional Gain - 21 CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102117041 chr12:102117041 synonymous SNV . 0 hm6A_associated_SNPs_90653 0 0 1 2 102117036 102117058 mRNA hsa-miR-340 CHPT1 miRanda miRanda
14034 chr1 112999478 112999478 1 + T A BRCA 112999478 + 112999458 112999498 41 GTCATCGTACCAAGTAGGGATCAACCAACGGTTCCATGCAG GTCATCGTACCAAGTAGGGAACAACCAACGGTTCCATGCAG Direct Gain 0 0.78090710226093 0 0.941008925437927 prediction 0.561814204521861 Functional Gain - 21 CTTNBP2NL ENSG00000143079 CDS Human protein_coding chr1:112999478 chr1:112999478 nonsynonymous SNV 0.998 2 hm6A_associated_SNPs_90660 0 0 0 1 112999470 112999491 mRNA hsa-miR-451 CTTNBP2NL miRanda miRanda
14034 chr4 106158345 106158345 1 + G A SKCM 106158345 + 106158325 106158365 41 AGCCACACCCCAGCTTTAGAGCAGCAAACAACTTCTTCAGA AGCCACACCCCAGCTTTAGAACAGCAAACAACTTCTTCAGA Direct Gain 0 0.780573873394225 0 0.984633088111877 prediction 0.56114774678845 Functional Gain - 21 TET2 ENSG00000168769 CDS Human protein_coding chr4:106158345 chr4:106158345 synonymous SNV . 0 hm6A_associated_SNPs_90663 0 0 0 1 106158338 106158359 mRNA hsa-miR-382 TET2 miRanda miRanda
14034 chr12 20905443 20905443 1 + G A COAD 20905443 + 20905423 20905463 41 ACAACCCAACTACTGGCCAGGCAAGGAAACTCAACTTTAGA ACAACCCAACTACTGGCCAGACAAGGAAACTCAACTTTAGA Direct Gain 0 0.780571996818589 0 0.9558345079422 prediction 0.561143993637178 Functional Gain - 21 SLCO1C1 ENSG00000139155 CDS Human protein_coding chr12:20905443 chr12:20905443 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_90664 0 0 0 2 20905423 20905444 mRNA hsa-miR-193a-3p SLCO1C1 miRanda miRanda
14034 chr12 20905443 20905443 1 + G A COAD 20905443 + 20905423 20905463 41 ACAACCCAACTACTGGCCAGGCAAGGAAACTCAACTTTAGA ACAACCCAACTACTGGCCAGACAAGGAAACTCAACTTTAGA Direct Gain 0 0.780571996818589 0 0.9558345079422 prediction 0.561143993637178 Functional Gain - 21 SLCO1C1 ENSG00000139155 CDS Human protein_coding chr12:20905443 chr12:20905443 nonsynonymous SNV 0.987 0 hm6A_associated_SNPs_90664 0 0 0 2 20905423 20905444 mRNA hsa-miR-193b SLCO1C1 miRanda miRanda
14034 chr17 38146062 38146062 1 + C A UCEC 38146060 + 38146040 38146080 41 CGGGCAGGCCACCCTGTTGAACCTCCTGCTGCGGAATTACC CGGGCAGGCCACCCTGTTGAACATCCTGCTGCGGAATTACC < 41bp 0.436657839683203 0.878940936220936 0.9235903 0.946698248386383 prediction 0.757881872441873 Functional Gain - 23 PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38146060 chr17:38146062 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_90679 0 0 1 1 38146048 38146071 mRNA hsa-miR-214 PSMD3 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827776 21827797 mRNA hsa-miR-25 XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827776 21827797 mRNA hsa-miR-32 XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827775 21827795 mRNA hsa-miR-33a XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827776 21827797 mRNA hsa-miR-92a XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827764 21827787 mRNA hsa-miR-7 XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827776 21827797 mRNA hsa-miR-363 XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827773 21827797 mRNA hsa-miR-367 XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827776 21827797 mRNA hsa-miR-92b XPO7 miRanda miRanda
14034 chr8 21827777 21827777 1 + T A KIRC 21827775 + 21827755 21827795 41 GTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAA GTTTGACTGTCAGAAGGATGACAATGTCTTCAGAAATGCAA < 41bp 0.503745795918479 0.854785078130537 0.013510585 0.171123892068863 prediction 0.702078564424117 Functional Gain - 23 XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827775 chr8:21827777 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90699 0 0 1 9 21827775 21827795 mRNA hsa-miR-33b XPO7 miRanda miRanda
14034 chr1 236708063 236708063 1 + C A UCEC 236708061 + 236708041 236708081 41 TCTCAAAAGCTTTAATGTTGACCTACTAGCAGGAAAATCAA TCTCAAAAGCTTTAATGTTGACATACTAGCAGGAAAATCAA < 41bp 0.413512072945109 0.844105866440352 0.39110726 0.115819156169891 prediction 0.688211732880703 Functional Gain - 23 LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236708061 chr1:236708063 nonsynonymous SNV 0.988 4 hm6A_associated_SNPs_90706 0 0 1 1 236708050 236708063 mRNA hsa-miR-505 LGALS8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544434 + 115544414 115544454 41 TCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTA TCTGAAGAAAGAAAAATTTGACATGCTGCTGGTGGACCCTA < 41bp 0.389845097681445 0.840394081673884 0.8411624 0.98061466217041 prediction 0.680788163347769 Functional Gain - 23 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544434 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_90710 0 0 0 7 115544423 115544444 mRNA hsa-miR-15a UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544434 + 115544414 115544454 41 TCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTA TCTGAAGAAAGAAAAATTTGACATGCTGCTGGTGGACCCTA < 41bp 0.389845097681445 0.840394081673884 0.8411624 0.98061466217041 prediction 0.680788163347769 Functional Gain - 23 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544434 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_90710 0 0 0 7 115544422 115544444 mRNA hsa-miR-16 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544434 + 115544414 115544454 41 TCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTA TCTGAAGAAAGAAAAATTTGACATGCTGCTGGTGGACCCTA < 41bp 0.389845097681445 0.840394081673884 0.8411624 0.98061466217041 prediction 0.680788163347769 Functional Gain - 23 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544434 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_90710 0 0 0 7 115544422 115544442 mRNA hsa-miR-214 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544434 + 115544414 115544454 41 TCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTA TCTGAAGAAAGAAAAATTTGACATGCTGCTGGTGGACCCTA < 41bp 0.389845097681445 0.840394081673884 0.8411624 0.98061466217041 prediction 0.680788163347769 Functional Gain - 23 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544434 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_90710 0 0 0 7 115544423 115544444 mRNA hsa-miR-15b UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544434 + 115544414 115544454 41 TCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTA TCTGAAGAAAGAAAAATTTGACATGCTGCTGGTGGACCCTA < 41bp 0.389845097681445 0.840394081673884 0.8411624 0.98061466217041 prediction 0.680788163347769 Functional Gain - 23 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544434 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_90710 0 0 0 7 115544423 115544444 mRNA hsa-miR-195 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544434 + 115544414 115544454 41 TCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTA TCTGAAGAAAGAAAAATTTGACATGCTGCTGGTGGACCCTA < 41bp 0.389845097681445 0.840394081673884 0.8411624 0.98061466217041 prediction 0.680788163347769 Functional Gain - 23 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544434 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_90710 0 0 0 7 115544423 115544444 mRNA hsa-miR-424 UGT8 miRanda miRanda
14034 chr4 115544436 115544436 1 + C A LUSC 115544434 + 115544414 115544454 41 TCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTA TCTGAAGAAAGAAAAATTTGACATGCTGCTGGTGGACCCTA < 41bp 0.389845097681445 0.840394081673884 0.8411624 0.98061466217041 prediction 0.680788163347769 Functional Gain - 23 UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544434 chr4:115544436 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_90710 0 0 0 7 115544424 115544444 mRNA hsa-miR-497 UGT8 miRanda miRanda
14034 chr2 232660879 232660879 1 + C A COAD 232660877 + 232660857 232660897 41 GAATCTCCGGGAACTAGAAGACCTTATCATTGAGGCTGTCT GAATCTCCGGGAACTAGAAGACATTATCATTGAGGCTGTCT < 41bp 0.380900275513567 0.83729169136026 0.5184824 0.913379311561584 prediction 0.674583382720519 Functional Gain - 23 COPS7B ENSG00000144524 CDS Human protein_coding chr2:232660877 chr2:232660879 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_90721 0 0 1 2 232660867 232660890 mRNA hsa-miR-433 COPS7B miRanda miRanda
14034 chr2 232660879 232660879 1 + C A COAD 232660877 + 232660857 232660897 41 GAATCTCCGGGAACTAGAAGACCTTATCATTGAGGCTGTCT GAATCTCCGGGAACTAGAAGACATTATCATTGAGGCTGTCT < 41bp 0.380900275513567 0.83729169136026 0.5184824 0.913379311561584 prediction 0.674583382720519 Functional Gain - 23 COPS7B ENSG00000144524 CDS Human protein_coding chr2:232660877 chr2:232660879 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_90721 0 0 1 2 232660861 232660886 mRNA hsa-miR-488 COPS7B miRanda miRanda
14034 chr3 141632520 141632520 1 + C A LIHC 141632518 + 141632498 141632538 41 TACTTTAGAAGAACAGAAGAACCTCACAGTCTGTCCTGATG TACTTTAGAAGAACAGAAGAACATCACAGTCTGTCCTGATG < 41bp 0.345751596075959 0.824915287407557 0.14811763 0.518053114414215 prediction 0.649830574815115 Functional Gain - 23 ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141632518 chr3:141632520 nonsynonymous SNV 0.629 2 hm6A_associated_SNPs_90733 0 0 1 1 141632512 141632534 mRNA hsa-miR-7 ATP1B3 miRanda miRanda
14034 chr6 42987073 42987073 1 + C A UCEC 42987071 + 42987051 42987091 41 ACTGGCCGTGATTCAGTATAACCTAGACCAGTCCTGTTTGC ACTGGCCGTGATTCAGTATAACATAGACCAGTCCTGTTTGC < 41bp 0.336491893485972 0.822733893086601 0.050211936 0.00858193635940552 prediction 0.645467786173203 Functional Gain - 23 KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42987071 chr6:42987073 nonsynonymous SNV 1.000 0 hm6A_associated_SNPs_90739 0 0 1 1 42987053 42987075 mRNA hsa-miR-154 KLHDC3 miRanda miRanda
14034 chr17 35311081 35311081 1 + C A UCEC 35311079 + 35311059 35311099 41 CTTCTTTTCAGCACTGTGGGACCAGCTCTTGGAAGGAAGGA CTTCTTTTCAGCACTGTGGGACAAGCTCTTGGAAGGAAGGA < 41bp 0.338371722762455 0.819011867267222 0.21923128 0.841936588287354 prediction 0.638023734534444 Functional Gain - 23 AATF ENSG00000108270 CDS Human other chr17:35311079 chr17:35311081 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_90745 0 0 1 1 35311070 35311090 mRNA hsa-miR-335 AATF miRanda miRanda
14034 chr15 63363318 63363318 1 + C A LGG 63363316 + 63363296 63363336 41 GGCTCATGCCAAAGAAGAAAACCTTAGTATGCATCAGATGC GGCTCATGCCAAAGAAGAAAACATTAGTATGCATCAGATGC < 41bp 0.445775539070654 0.818563201457246 0.3246526 0.82771372795105 prediction 0.637126402914492 Functional Gain - 23 TPM1 ENSG00000140416 CDS Human protein_coding chr15:63363316 chr15:63363318 nonsynonymous SNV 1.000 2 hm6A_associated_SNPs_90746 0 0 1 1 63363317 63363340 mRNA hsa-miR-338-3p TPM1 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623268 128623286 mRNA hsa-let-7a ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623268 128623286 mRNA hsa-let-7b ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623268 128623286 mRNA hsa-let-7c ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623261 128623286 mRNA hsa-let-7d ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623265 128623286 mRNA hsa-let-7e ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623263 128623286 mRNA hsa-let-7f ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623268 128623286 mRNA hsa-miR-98 ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623263 128623286 mRNA hsa-let-7g ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623268 128623286 mRNA hsa-let-7i ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623271 128623294 mRNA hsa-miR-370 ACAD9 miRanda miRanda
14034 chr3 128623279 128623279 1 + C A UCEC 128623277 + 128623257 128623297 41 CTTACGTCATGGAGAGTATGACCTACCTCACAGCAGGGATG CTTACGTCATGGAGAGTATGACATACCTCACAGCAGGGATG < 41bp 0.328807790462237 0.815992573866832 0.5802781 0.75622946023941 prediction 0.631985147733664 Functional Gain - 23 ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623277 chr3:128623279 synonymous SNV . 0 hm6A_associated_SNPs_90751 0 0 1 11 128623275 128623299 mRNA hsa-miR-324-5p ACAD9 miRanda miRanda
14034 chr2 202149791 202149791 1 + C A UCEC 202149789 + 202149769 202149809 41 TGCCCTTCCCTTGCTGGAAAACCCAAAGTGTTTTTTATTCA TGCCCTTCCCTTGCTGGAAAACACAAAGTGTTTTTTATTCA < 41bp 0.498256358448999 0.813064958116224 0.5414723 0.554620087146759 prediction 0.626129916232449 Functional Gain - 23 CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149789 chr2:202149791 nonsynonymous SNV 0.988 5 hm6A_associated_SNPs_90761 0 0 0 1 202149774 202149797 mRNA hsa-miR-9 CASP8 miRanda miRanda
14034 chr6 42854023 42854023 1 + C A UCEC 42854021 + 42854001 42854041 41 TGGCGTCATTTGCTTGGAAGACCTCATTCATGAAATTGCCT TGGCGTCATTTGCTTGGAAGACATCATTCATGAAATTGCCT < 41bp 0.331027501627205 0.810431630772873 0.11594367 0.0179845988750458 prediction 0.620863261545745 Functional Gain - 23 RPL7L1 ENSG00000146223 CDS Human protein_coding chr6:42854021 chr6:42854023 nonsynonymous SNV 0.994 2 hm6A_associated_SNPs_90765 0 0 1 1 42854012 42854034 mRNA hsa-miR-433 RPL7L1 miRanda miRanda
14034 chr4 148407212 148407212 1 + C A COAD 148407210 + 148407190 148407230 41 AGCCAGTCTTGCCCTTGGAGACCTTATCTATGTGGTCATTG AGCCAGTCTTGCCCTTGGAGACATTATCTATGTGGTCATTG < 41bp 0.565469025733087 0.8755429673287 0.05594611 0.0491346418857574 prediction 0.620147883191226 Functional Gain - 23 EDNRA ENSG00000151617 CDS Human protein_coding chr4:148407210 chr4:148407212 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_90766 0 0 0 1 148407202 148407223 mRNA hsa-miR-376c EDNRA miRanda miRanda
14034 chr12 95906603 95906603 1 + C A rs3794261 95906601 + 95906581 95906621 41 GAGAAGTATATGCAATTGAAACCTTTGGTAGTACAGGAAAA GAGAAGTATATGCAATTGAAACATTTGGTAGTACAGGAAAA < 41bp 0.257359379758822 0.808504448530001 0.011047423 0.00189822912216187 prediction 0.617008897060003 Functional Gain - 23 METAP2 ENSG00000111142 CDS Human protein_coding chr12:95906601 chr12:95906603 synonymous SNV . 0 hm6A_associated_SNPs_90772 0 0 1 1 95906597 95906618 mRNA hsa-miR-486-5p METAP2 miRanda miRanda
14034 chr4 39226605 39226605 1 + C A rs114689848 39226603 + 39226583 39226623 41 TTTTTCCCGACCCAAATGGGACCAGATTAGTTTTCATTGAT TTTTTCCCGACCCAAATGGGACAAGATTAGTTTTCATTGAT < 41bp 0.276760517635668 0.804487393982532 0.089532405 0.78326404094696 prediction 0.608974787965063 Functional Gain - 23 WDR19 ENSG00000157796 CDS Human protein_coding chr4:39226603 chr4:39226605 synonymous SNV . 0 hm6A_associated_SNPs_90781 1 0 0 2 39226587 39226608 mRNA hsa-miR-133a WDR19 miRanda miRanda
14034 chr4 39226605 39226605 1 + C A rs114689848 39226603 + 39226583 39226623 41 TTTTTCCCGACCCAAATGGGACCAGATTAGTTTTCATTGAT TTTTTCCCGACCCAAATGGGACAAGATTAGTTTTCATTGAT < 41bp 0.276760517635668 0.804487393982532 0.089532405 0.78326404094696 prediction 0.608974787965063 Functional Gain - 23 WDR19 ENSG00000157796 CDS Human protein_coding chr4:39226603 chr4:39226605 synonymous SNV . 0 hm6A_associated_SNPs_90781 1 0 0 2 39226587 39226608 mRNA hsa-miR-133b WDR19 miRanda miRanda
14034 chr8 42026549 42026549 1 + C A COAD 42026547 + 42026527 42026567 41 TTAAGGGCATAAAATACATGACCAAAGCTGGGAAGTTCCAA TTAAGGGCATAAAATACATGACAAAAGCTGGGAAGTTCCAA < 41bp 0.518929107930714 0.816142555757149 0.27872342 0.459504038095474 prediction 0.59442689565287 Functional Gain - 23 AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42026547 chr8:42026549 synonymous SNV . 0 hm6A_associated_SNPs_90800 0 0 0 1 42026533 42026554 mRNA hsa-miR-9 AP3M2 miRanda miRanda
14034 chr1 109338859 109338859 1 + C A UCEC 109338857 + 109338837 109338877 41 ATATTTTATTTTCATTAAGGACCTGGCACTTGGAACTGATG ATATTTTATTTTCATTAAGGACATGGCACTTGGAACTGATG < 41bp 0.272810781581434 0.794894013586232 0.35769942 0.926427602767944 prediction 0.589788027172464 Functional Gain - 23 STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109338857 chr1:109338859 nonsynonymous SNV 0.997 4 hm6A_associated_SNPs_90803 0 0 1 1 109338858 109338880 mRNA hsa-miR-153 STXBP3 miRanda miRanda
14034 chr20 5996117 5996117 1 + C A UCEC 5996115 + 5996095 5996135 41 GTATCTTATATGTTAGCTTGACCTATGCAGATCTTATTCCA GTATCTTATATGTTAGCTTGACATATGCAGATCTTATTCCA < 41bp 0.216805954810485 0.789169970991995 0.08123869 0.315659701824188 prediction 0.57833994198399 Functional Gain - 23 CRLS1 ENSG00000088766 CDS Human protein_coding chr20:5996115 chr20:5996117 synonymous SNV . 0 hm6A_associated_SNPs_90824 0 0 1 1 5996100 5996124 mRNA hsa-miR-153 CRLS1 miRanda miRanda
14034 chr2 32379584 32379584 1 + C T rs558483397 32379582 + 32379562 32379602 41 TTAAGGAAATACCTTTGTAAACCTGCAGAACATTTTACTTA TTAAGGAAATACCTTTGTAAACTTGCAGAACATTTTACTTA < 41bp 0.510232351517557 0.799229273458715 0.9150828 0.992196440696716 prediction 0.577993843882316 Functional Gain - 23 SPAST ENSG00000021574 UTR3 Human protein_coding chr2:32379582 chr2:32379584 . . 0 hm6A_associated_SNPs_90826 1 0 1 1 32379571 32379592 mRNA hsa-miR-544 SPAST miRanda miRanda
14034 chr1 10511634 10511634 1 + C A UCEC 10511632 + 10511612 10511652 41 GCAGGAACTTCTTCTGGAAGACCTTCTCCTCCTGCAAATAA GCAGGAACTTCTTCTGGAAGACATTCTCCTCCTGCAAATAA < 41bp 0.596636617722057 0.878049421555173 0.2632272 0.949399411678314 prediction 0.562825607666232 Functional Gain - 23 CENPS-CORT;CORT ENSG00000175279;ENSG00000241563;ENSG00000251503 CDS Human other chr1:10511632 chr1:10511634 synonymous SNV . 0 hm6A_associated_SNPs_90858 0 0 0 1 10511624 10511644 mRNA hsa-miR-185 APITD1 miRanda miRanda
14034 chr2 152320383 152320383 1 + C A UCEC 152320381 + 152320361 152320401 41 CGACGTAAGGAAGAAGAAAAACCTCTTCAGAAGAGTCCATT CGACGTAAGGAAGAAGAAAAACATCTTCAGAAGAGTCCATT < 41bp 0.593591432070864 0.870690580208958 0.92487085 0.990065574645996 prediction 0.554198296276187 Functional Gain - 23 RIF1 ENSG00000080345 CDS Human protein_coding chr2:152320381 chr2:152320383 nonsynonymous SNV 0.150 1 hm6A_associated_SNPs_90871 0 0 1 1 152320370 152320390 mRNA hsa-miR-488 RIF1 miRanda miRanda
14034 chr1 222906001 222906001 1 + C A BRCA 222905999 + 222905979 222906019 41 AAACCAGAAGAAGAAGTGAAACCTGTGAAAGAACCAGACAT AAACCAGAAGAAGAAGTGAAACATGTGAAAGAACCAGACAT < 41bp 0.433086173383113 0.776732866228583 0.1550048 0.717870354652405 prediction 0.553465732457165 Functional Gain - 23 BROX ENSG00000162819 CDS Human protein_coding chr1:222905999 chr1:222906001 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_90872 0 0 1 2 222905998 222906007 mRNA hsa-miR-27a C1orf58 miRanda miRanda
14034 chr1 222906001 222906001 1 + C A BRCA 222905999 + 222905979 222906019 41 AAACCAGAAGAAGAAGTGAAACCTGTGAAAGAACCAGACAT AAACCAGAAGAAGAAGTGAAACATGTGAAAGAACCAGACAT < 41bp 0.433086173383113 0.776732866228583 0.1550048 0.717870354652405 prediction 0.553465732457165 Functional Gain - 23 BROX ENSG00000162819 CDS Human protein_coding chr1:222905999 chr1:222906001 nonsynonymous SNV 0.995 3 hm6A_associated_SNPs_90872 0 0 1 2 222905998 222906007 mRNA hsa-miR-27b C1orf58 miRanda miRanda
14034 chr1 225976963 225976963 1 + C T UCEC 225976961 + 225976941 225976981 41 GTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTAAAGA GTGTTTGGTGTATAAAACAGACTAAGCTCAAGATGTAAAGA < 41bp 0.490038872200124 0.774749541874264 0.59642214 0.880380034446716 prediction 0.549499083748528 Functional Gain - 23 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976961 chr1:225976963 stopgain 0.999 0 hm6A_associated_SNPs_90888 0 0 1 2 225976945 225976966 mRNA hsa-miR-133a SRP9 miRanda miRanda
14034 chr1 225976963 225976963 1 + C T UCEC 225976961 + 225976941 225976981 41 GTGTTTGGTGTATAAAACAGACCAAGCTCAAGATGTAAAGA GTGTTTGGTGTATAAAACAGACTAAGCTCAAGATGTAAAGA < 41bp 0.490038872200124 0.774749541874264 0.59642214 0.880380034446716 prediction 0.549499083748528 Functional Gain - 23 SRP9 ENSG00000143742 CDS Human protein_coding chr1:225976961 chr1:225976963 stopgain 0.999 0 hm6A_associated_SNPs_90888 0 0 1 2 225976945 225976966 mRNA hsa-miR-133b SRP9 miRanda miRanda
14034 chr16 21974152 21974152 1 + C A UCEC 21974150 + 21974130 21974170 41 TCGTCGTTGGGAAGTAGCTGACCTTCAGCCTCAGCTAAAGA TCGTCGTTGGGAAGTAGCTGACATTCAGCCTCAGCTAAAGA < 41bp 0.323754140020177 0.76335112687653 0.04324642 0.472294867038727 prediction 0.526702253753059 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21974150 chr16:21974152 nonsynonymous SNV 0.050 1 hm6A_associated_SNPs_90964 0 0 1 1 21974141 21974162 mRNA hsa-miR-485-5p UQCRC2 miRanda miRanda
14034 chr14 100847729 100847729 1 + C T rs57039819 100847727 + 100847707 100847747 41 ATGCTCAAAGTGAGTCTGAAACCGTAGGTAAAAATGGCAGC ATGCTCAAAGTGAGTCTGAAACTGTAGGTAAAAATGGCAGC < 41bp 0.520761024277441 0.780771710312388 0.28414026 0.753237843513489 prediction 0.520021372069894 Functional Gain - 23 WDR25 ENSG00000176473 CDS Human protein_coding chr14:100847727 chr14:100847729 synonymous SNV . 0 hm6A_associated_SNPs_90995 0 0 1 2 100847728 100847749 mRNA hsa-miR-22 WDR25 miRanda miRanda
14034 chr14 100847729 100847729 1 + C T rs57039819 100847727 + 100847707 100847747 41 ATGCTCAAAGTGAGTCTGAAACCGTAGGTAAAAATGGCAGC ATGCTCAAAGTGAGTCTGAAACTGTAGGTAAAAATGGCAGC < 41bp 0.520761024277441 0.780771710312388 0.28414026 0.753237843513489 prediction 0.520021372069894 Functional Gain - 23 WDR25 ENSG00000176473 CDS Human protein_coding chr14:100847727 chr14:100847729 synonymous SNV . 0 hm6A_associated_SNPs_90995 0 0 1 2 100847724 100847747 mRNA hsa-miR-136 WDR25 miRanda miRanda
14034 chr5 35876496 35876496 1 + C T SKCM 35876494 + 35876474 35876514 41 ATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGC ATCTGGAATCCTGACATTGAACTCAGTTGCTCAGGGTCAGC < 41bp 0.555382719380215 0.808436638709617 0.18333879 0.816833972930908 prediction 0.506107838658804 Functional Gain - 23 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876494 chr5:35876496 nonsynonymous SNV 0.852 2 hm6A_associated_SNPs_91053 0 0 0 5 35876489 35876510 mRNA hsa-miR-125b IL7R miRanda miRanda
14034 chr5 35876496 35876496 1 + C T SKCM 35876494 + 35876474 35876514 41 ATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGC ATCTGGAATCCTGACATTGAACTCAGTTGCTCAGGGTCAGC < 41bp 0.555382719380215 0.808436638709617 0.18333879 0.816833972930908 prediction 0.506107838658804 Functional Gain - 23 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876494 chr5:35876496 nonsynonymous SNV 0.852 2 hm6A_associated_SNPs_91053 0 0 0 5 35876487 35876510 mRNA hsa-miR-125a-5p IL7R miRanda miRanda
14034 chr5 35876496 35876496 1 + C T SKCM 35876494 + 35876474 35876514 41 ATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGC ATCTGGAATCCTGACATTGAACTCAGTTGCTCAGGGTCAGC < 41bp 0.555382719380215 0.808436638709617 0.18333879 0.816833972930908 prediction 0.506107838658804 Functional Gain - 23 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876494 chr5:35876496 nonsynonymous SNV 0.852 2 hm6A_associated_SNPs_91053 0 0 0 5 35876484 35876506 mRNA hsa-miR-146a IL7R miRanda miRanda
14034 chr5 35876496 35876496 1 + C T SKCM 35876494 + 35876474 35876514 41 ATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGC ATCTGGAATCCTGACATTGAACTCAGTTGCTCAGGGTCAGC < 41bp 0.555382719380215 0.808436638709617 0.18333879 0.816833972930908 prediction 0.506107838658804 Functional Gain - 23 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876494 chr5:35876496 nonsynonymous SNV 0.852 2 hm6A_associated_SNPs_91053 0 0 0 5 35876484 35876506 mRNA hsa-miR-146b-5p IL7R miRanda miRanda
14034 chr5 35876496 35876496 1 + C T SKCM 35876494 + 35876474 35876514 41 ATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGC ATCTGGAATCCTGACATTGAACTCAGTTGCTCAGGGTCAGC < 41bp 0.555382719380215 0.808436638709617 0.18333879 0.816833972930908 prediction 0.506107838658804 Functional Gain - 23 IL7R ENSG00000168685 CDS Human protein_coding chr5:35876494 chr5:35876496 nonsynonymous SNV 0.852 2 hm6A_associated_SNPs_91053 0 0 0 5 35876491 35876512 mRNA hsa-miR-504 IL7R miRanda miRanda
14034 chr16 732441 732441 1 - G T LGG 732443 - 732423 732463 41 CAGAGATGAATGCGTCAATAACCTCCTTCATAGCCAAGTTG CAGAGATGAATGCGTCAATAACATCCTTCATAGCCAAGTTG < 41bp 0.663182482392384 0.915027166389903 0.29520652 0.817752480506897 prediction 0.503689367995038 Functional Gain - 23 STUB1 ENSG00000103266 CDS Human protein_coding chr16:732443 chr16:732441 nonsynonymous SNV 0.347 1 hm6A_associated_SNPs_91065 0 0 1 1 732439 732457 mRNA hsa-miR-154 JMJD8 miRanda miRanda
14034 chr11 64087266 64087266 1 + C A SKCM 64087264 + 64087244 64087284 41 GGAGCCAGGGAACAAGGTGAACCTGGCAGAGCTGTTCAAGG GGAGCCAGGGAACAAGGTGAACATGGCAGAGCTGTTCAAGG < 41bp 0.296283925131614 0.749595896851828 0.29609594 0.405080944299698 prediction 0.499191793703657 Functional Gain - 23 PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64087264 chr11:64087266 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91083 0 0 1 1 64087256 64087280 mRNA hsa-miR-212 PRDX5 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979966 21979987 mRNA hsa-miR-25 UQCRC2 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979967 21979987 mRNA hsa-miR-32 UQCRC2 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979966 21979987 mRNA hsa-miR-92a UQCRC2 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979955 21979977 mRNA hsa-miR-203 UQCRC2 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979962 21979987 mRNA hsa-miR-363 UQCRC2 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979966 21979987 mRNA hsa-miR-367 UQCRC2 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979968 21979989 mRNA hsa-miR-544 UQCRC2 miRanda miRanda
14034 chr16 21979970 21979970 1 + C A SKCM 21979968 + 21979948 21979988 41 GTTACATTACTTCGTTCAGAACCATTTCACAAGTGCAAGAA GTTACATTACTTCGTTCAGAACAATTTCACAAGTGCAAGAA < 41bp 0.197060735758983 0.749130730932219 0.020032763 0.425053209066391 prediction 0.498261461864437 Functional Gain - 23 UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21979968 chr16:21979970 nonsynonymous SNV 0.999 0 hm6A_associated_SNPs_91087 0 0 1 8 21979966 21979987 mRNA hsa-miR-92b UQCRC2 miRanda miRanda
14034 chr9 135554557 135554557 1 + C A UCEC 135554555 + 135554535 135554575 41 TCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCT TCCAATTTGTTACTCTCAAAACATTTGAAGAGGCAGCTGCT < 41bp 0.666764827704503 0.915568205734055 0.9757508 0.948131322860718 prediction 0.497606756059105 Functional Gain - 23 GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135554555 chr9:135554557 synonymous SNV . 0 hm6A_associated_SNPs_91091 0 0 1 1 135554552 135554573 mRNA hsa-miR-22 GTF3C4 miRanda miRanda
14034 chr1 28800111 28800111 1 + C A LIHC 28800109 + 28800089 28800129 41 AGTGGTACATTGTTATCAAAACCGTCCCCACCCTTACCACC AGTGGTACATTGTTATCAAAACAGTCCCCACCCTTACCACC < 41bp 0.636147410691102 0.884415251209206 0.5212259 0.901106059551239 prediction 0.496535681036208 Functional Gain - 23 PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28800109 chr1:28800111 nonsynonymous SNV 0.998 3 hm6A_associated_SNPs_91100 0 0 1 1 28800099 28800120 mRNA hsa-miR-491-5p PHACTR4 miRanda miRanda
14034 chr4 129120692 129120692 1 + T A STAD 129120690 + 129120670 129120710 41 TTCCAGCATCCTTCTCATGAACTTTTGAAGGAAAATGGCTT TTCCAGCATCCTTCTCATGAACATTTGAAGGAAAATGGCTT < 41bp 0.423465202686653 0.745476601636443 0.15194097 0.871473073959351 prediction 0.490953203272886 Functional Gain - 23 LARP1B ENSG00000138709 CDS Human protein_coding chr4:129120690 chr4:129120692 nonsynonymous SNV 0.764 4 hm6A_associated_SNPs_91129 0 0 0 1 129120680 129120701 mRNA hsa-miR-205 LARP1B miRanda miRanda
14034 chr1 21904264 21904264 1 + C T rs553947949 21904262 + 21904242 21904282 41 CTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGC CTGCAACTGCAAGAAAGGGGACTCAAGAAACCAAAGTCTGC < 41bp 0.623590861057656 0.867803695063236 0.8421592 0.985107779502869 prediction 0.48842566801116 Functional Gain - 23 ALPL ENSG00000162551 UTR3 Human protein_coding chr1:21904262 chr1:21904264 . . 0 hm6A_associated_SNPs_91144 0 0 0 1 21904257 21904278 mRNA hsa-miR-9 ALPL miRanda miRanda
14034 chr9 35607985 35607985 1 + C A CESC 35607983 + 35607963 35608003 41 CATCGCCCGAGTACCTGCAGACCCTGACTACCTACCACGCA CATCGCCCGAGTACCTGCAGACACTGACTACCTACCACGCA < 41bp 0.456020229042149 0.742136809966961 0.5906797 0.923053920269012 prediction 0.484273619933922 Functional Gain - 23 TESK1 ENSG00000107140 CDS Human protein_coding chr9:35607983 chr9:35607985 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_91163 0 0 1 2 35607977 35607996 mRNA hsa-miR-196a TESK1 miRanda miRanda
14034 chr9 35607985 35607985 1 + C A CESC 35607983 + 35607963 35608003 41 CATCGCCCGAGTACCTGCAGACCCTGACTACCTACCACGCA CATCGCCCGAGTACCTGCAGACACTGACTACCTACCACGCA < 41bp 0.456020229042149 0.742136809966961 0.5906797 0.923053920269012 prediction 0.484273619933922 Functional Gain - 23 TESK1 ENSG00000107140 CDS Human protein_coding chr9:35607983 chr9:35607985 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_91163 0 0 1 2 35607975 35607996 mRNA hsa-miR-196b TESK1 miRanda miRanda
14034 chr20 17950526 17950526 1 + C T MESO 17950524 + 17950504 17950544 41 TGAAGATGAAGTTATTTCAGACCATTTGCAGGCAGCTCAGG TGAAGATGAAGTTATTTCAGACTATTTGCAGGCAGCTCAGG < 41bp 0.486364112405109 0.741221003159229 0.9303442 0.962786853313446 prediction 0.482442006318457 Functional Gain - 23 MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950524 chr20:17950526 synonymous SNV . 0 hm6A_associated_SNPs_91171 0 0 1 1 17950520 17950541 mRNA hsa-miR-22 C20orf72 miRanda miRanda
14034 chr7 148921497 148921497 1 + C T READ 148921495 + 148921475 148921515 41 CCGTAAGGAGCACCTGCAGAACCACCAGCGGCTGCACACGG CCGTAAGGAGCACCTGCAGAACTACCAGCGGCTGCACACGG < 41bp 0.550413655880969 0.791135738627114 0.9892975 0.999963402748108 prediction 0.48144416549229 Functional Gain - 23 ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921495 chr7:148921497 nonsynonymous SNV 1.000 3 hm6A_associated_SNPs_91177 0 0 1 1 148921484 148921504 mRNA hsa-miR-138 ZNF282 miRanda miRanda
14034 chrX 117926767 117926767 1 + C T rs762626314 117926765 + 117926745 117926785 41 GAGGCAGCTTCTTTGCCAAGACCTTTCAAAGCCATTTTAGG GAGGCAGCTTCTTTGCCAAGACTTTTCAAAGCCATTTTAGG < 41bp 0.415712598282378 0.737893624056784 0.04105696 0.652827858924866 prediction 0.475787248113567 Functional Gain - 23 IL13RA1 ENSG00000131724 UTR3 Human protein_coding chrX:117926765 chrX:117926767 . . 0 hm6A_associated_SNPs_91207 0 0 1 3 117926758 117926780 mRNA hsa-miR-135a IL13RA1 miRanda miRanda
14034 chrX 117926767 117926767 1 + C T rs762626314 117926765 + 117926745 117926785 41 GAGGCAGCTTCTTTGCCAAGACCTTTCAAAGCCATTTTAGG GAGGCAGCTTCTTTGCCAAGACTTTTCAAAGCCATTTTAGG < 41bp 0.415712598282378 0.737893624056784 0.04105696 0.652827858924866 prediction 0.475787248113567 Functional Gain - 23 IL13RA1 ENSG00000131724 UTR3 Human protein_coding chrX:117926765 chrX:117926767 . . 0 hm6A_associated_SNPs_91207 0 0 1 3 117926758 117926780 mRNA hsa-miR-135b IL13RA1 miRanda miRanda
14034 chrX 117926767 117926767 1 + C T rs762626314 117926765 + 117926745 117926785 41 GAGGCAGCTTCTTTGCCAAGACCTTTCAAAGCCATTTTAGG GAGGCAGCTTCTTTGCCAAGACTTTTCAAAGCCATTTTAGG < 41bp 0.415712598282378 0.737893624056784 0.04105696 0.652827858924866 prediction 0.475787248113567 Functional Gain - 23 IL13RA1 ENSG00000131724 UTR3 Human protein_coding chrX:117926765 chrX:117926767 . . 0 hm6A_associated_SNPs_91207 0 0 1 3 117926758 117926773 mRNA hsa-miR-488 IL13RA1 miRanda miRanda
14034 chr6 43582163 43582163 1 + C A UCEC 43582161 + 43582141 43582181 41 TTTGCAGCCCCACTCTTCAAACCCCCAGGTTGTTTCTGCCG TTTGCAGCCCCACTCTTCAAACACCCAGGTTGTTTCTGCCG < 41bp 0.465488705224272 0.737730868282993 0.83799946 0.942083835601807 prediction 0.475461736565985 Functional Gain - 23 POLH ENSG00000170734 CDS Human protein_coding chr6:43582161 chr6:43582163 nonsynonymous SNV 0.009 1 hm6A_associated_SNPs_91208 0 0 1 1 43582151 43582172 mRNA hsa-miR-490-3p POLH miRanda miRanda
14034 chr8 25364822 25364822 1 + C T SKCM 25364820 + 25364800 25364840 41 TGTCTGATGCCATTGAGCAAACCTTTCAGAGGAGAAATAGT TGTCTGATGCCATTGAGCAAACTTTTCAGAGGAGAAATAGT < 41bp 0.438646971835118 0.736523940235809 0.8557074 0.87957775592804 prediction 0.473047880471618 Functional Gain - 23 CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25364820 chr8:25364822 synonymous SNV . 0 hm6A_associated_SNPs_91222 0 0 1 1 25364807 25364828 mRNA hsa-miR-488 CDCA2 miRanda miRanda
14034 chr22 17538047 17538047 1 + C T rs115080341 17538045 + 17538025 17538065 41 CCTGTTCGAAGACTCATGAGACCGTGCTGCACACTGGACTT CCTGTTCGAAGACTCATGAGACTGTGCTGCACACTGGACTT < 41bp 0.617735375177889 0.850388765338648 0.81695306 0.996321320533752 prediction 0.465306780321518 Functional Gain - 23 CECR7 ENSG00000237438 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:17538045 chr22:17538047 . . 0 hm6A_associated_SNPs_91259 0 0 0 2 17538039 17538062 mRNA hsa-miR-199a-5p CECR7 miRanda miRanda
14034 chr22 17538047 17538047 1 + C T rs115080341 17538045 + 17538025 17538065 41 CCTGTTCGAAGACTCATGAGACCGTGCTGCACACTGGACTT CCTGTTCGAAGACTCATGAGACTGTGCTGCACACTGGACTT < 41bp 0.617735375177889 0.850388765338648 0.81695306 0.996321320533752 prediction 0.465306780321518 Functional Gain - 23 CECR7 ENSG00000237438 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:17538045 chr22:17538047 . . 0 hm6A_associated_SNPs_91259 0 0 0 2 17538039 17538062 mRNA hsa-miR-199b-5p CECR7 miRanda miRanda
14034 chr9 92221010 92221010 1 + C T rs8252 92221008 + 92220988 92221028 41 CGAGTGACAGCCCGGCGGGGACCTTGGTCTGATCGACGTGG CGAGTGACAGCCCGGCGGGGACTTTGGTCTGATCGACGTGG < 41bp 0.485527203866853 0.730869566105574 0.9653652 0.994696497917175 prediction 0.461739132211148 Functional Gain - 23 GADD45G ENSG00000130222 UTR3 Human protein_coding chr9:92221008 chr9:92221010 . . 0 hm6A_associated_SNPs_91279 0 0 0 1 92220998 92221022 mRNA hsa-miR-383 GADD45G miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260592 + 113260572 113260612 41 TTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCAC TTGATAATTTCCAAGACAAAACATGCCATTTGACCAATCAC < 41bp 0.210959883036153 0.729798466676816 0.18586096 0.87358295917511 prediction 0.459596933353632 Functional Gain - 23 TTL ENSG00000114999 CDS Human protein_coding chr2:113260592 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_91287 0 0 1 7 113260593 113260617 mRNA hsa-miR-34a TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260592 + 113260572 113260612 41 TTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCAC TTGATAATTTCCAAGACAAAACATGCCATTTGACCAATCAC < 41bp 0.210959883036153 0.729798466676816 0.18586096 0.87358295917511 prediction 0.459596933353632 Functional Gain - 23 TTL ENSG00000114999 CDS Human protein_coding chr2:113260592 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_91287 0 0 1 7 113260584 113260609 mRNA hsa-miR-182 TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260592 + 113260572 113260612 41 TTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCAC TTGATAATTTCCAAGACAAAACATGCCATTTGACCAATCAC < 41bp 0.210959883036153 0.729798466676816 0.18586096 0.87358295917511 prediction 0.459596933353632 Functional Gain - 23 TTL ENSG00000114999 CDS Human protein_coding chr2:113260592 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_91287 0 0 1 7 113260580 113260601 mRNA hsa-miR-183 TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260592 + 113260572 113260612 41 TTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCAC TTGATAATTTCCAAGACAAAACATGCCATTTGACCAATCAC < 41bp 0.210959883036153 0.729798466676816 0.18586096 0.87358295917511 prediction 0.459596933353632 Functional Gain - 23 TTL ENSG00000114999 CDS Human protein_coding chr2:113260592 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_91287 0 0 1 7 113260590 113260611 mRNA hsa-miR-219-5p TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260592 + 113260572 113260612 41 TTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCAC TTGATAATTTCCAAGACAAAACATGCCATTTGACCAATCAC < 41bp 0.210959883036153 0.729798466676816 0.18586096 0.87358295917511 prediction 0.459596933353632 Functional Gain - 23 TTL ENSG00000114999 CDS Human protein_coding chr2:113260592 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_91287 0 0 1 7 113260588 113260609 mRNA hsa-miR-133a TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260592 + 113260572 113260612 41 TTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCAC TTGATAATTTCCAAGACAAAACATGCCATTTGACCAATCAC < 41bp 0.210959883036153 0.729798466676816 0.18586096 0.87358295917511 prediction 0.459596933353632 Functional Gain - 23 TTL ENSG00000114999 CDS Human protein_coding chr2:113260592 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_91287 0 0 1 7 113260593 113260617 mRNA hsa-miR-34c-5p TTL miRanda miRanda
14034 chr2 113260594 113260594 1 + C A UCEC 113260592 + 113260572 113260612 41 TTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCAC TTGATAATTTCCAAGACAAAACATGCCATTTGACCAATCAC < 41bp 0.210959883036153 0.729798466676816 0.18586096 0.87358295917511 prediction 0.459596933353632 Functional Gain - 23 TTL ENSG00000114999 CDS Human protein_coding chr2:113260592 chr2:113260594 synonymous SNV . 0 hm6A_associated_SNPs_91287 0 0 1 7 113260588 113260609 mRNA hsa-miR-133b TTL miRanda miRanda
14034 chr1 146736116 146736116 1 + T A HNSC 146736114 + 146736094 146736134 41 TCAGTCTCCTGTTGACCGGAACTCCCATCCAGAACAGCCTC TCAGTCTCCTGTTGACCGGAACACCCATCCAGAACAGCCTC < 41bp 0.43415252525852 0.726581644719053 0.16361406 0.0283206403255463 prediction 0.453163289438107 Functional Gain - 23 CHD1L ENSG00000131778 CDS Human protein_coding chr1:146736114 chr1:146736116 synonymous SNV . 0 hm6A_associated_SNPs_91324 0 0 1 1 146736114 146736135 mRNA hsa-miR-485-5p CHD1L miRanda miRanda
14034 chr9 125084878 125084878 1 + C T SKCM 125084876 + 125084856 125084896 41 ACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGATGA ACAGGCATCTGGCAGTGAAGACTAAAGAACTCCTTGGATGA < 41bp 0.635425270865703 0.860530034549287 0.635043 0.926352500915527 prediction 0.450209527367168 Functional Gain - 23 MRRF ENSG00000148187 CDS Human protein_coding chr9:125084876 chr9:125084878 synonymous SNV . 0 hm6A_associated_SNPs_91337 0 0 1 2 125084860 125084883 mRNA hsa-miR-9 MRRF miRanda miRanda
14034 chr9 125084878 125084878 1 + C T SKCM 125084876 + 125084856 125084896 41 ACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGATGA ACAGGCATCTGGCAGTGAAGACTAAAGAACTCCTTGGATGA < 41bp 0.635425270865703 0.860530034549287 0.635043 0.926352500915527 prediction 0.450209527367168 Functional Gain - 23 MRRF ENSG00000148187 CDS Human protein_coding chr9:125084876 chr9:125084878 synonymous SNV . 0 hm6A_associated_SNPs_91337 0 0 1 2 125084874 125084883 mRNA hsa-miR-9 MRRF miRanda miRanda
14034 chr6 37358539 37358539 1 + C T SKCM 37358537 + 37358517 37358557 41 GCAAAGAGATTGTTCTGAAGACCGTGCTCTAAGGGCATTTG GCAAAGAGATTGTTCTGAAGACTGTGCTCTAAGGGCATTTG < 41bp 0.686451494293555 0.911312605377243 0.18412709 0.578909277915955 prediction 0.449722222167378 Functional Gain - 23 RNF8 ENSG00000112130 CDS Human protein_coding chr6:37358537 chr6:37358539 nonsynonymous SNV 0.003 0 hm6A_associated_SNPs_91341 0 0 1 1 37358535 37358556 mRNA hsa-miR-365 RNF8 miRanda miRanda
14034 chr12 12247694 12247694 1 + C A rs61738409 12247692 + 12247672 12247712 41 CCAGGTCCTAATGGGTGTGGACCCCAGGGGAGAATCAGAGG CCAGGTCCTAATGGGTGTGGACACCAGGGGAGAATCAGAGG < 41bp 0.34961635467696 0.7214331209675 0.5922595 0.836341083049774 prediction 0.442866241935 Functional Gain - 23 BCL2L14 ENSG00000121380 CDS Human protein_coding chr12:12247692 chr12:12247694 nonsynonymous SNV 0.956 0 hm6A_associated_SNPs_91385 0 0 0 1 12247692 12247715 mRNA hsa-miR-504 BCL2L14 miRanda miRanda
14034 chr1 64125387 64125387 1 + C T rs190818785 64125385 + 64125365 64125405 41 GTACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATT GTACGTCCCTCCACCCCCGGACTCATCCAAGTCATCTGATT < 41bp 0.648241643343381 0.86955856535791 0.56913334 0.83987295627594 prediction 0.442633844029057 Functional Gain - 23 PGM1 ENSG00000079739 UTR3 Human protein_coding chr1:64125385 chr1:64125387 . . 0 hm6A_associated_SNPs_91388 0 0 1 1 64125387 64125408 mRNA hsa-miR-421 PGM1 miRanda miRanda
14034 chr20 8862413 8862413 1 + C A LUAD 8862411 + 8862391 8862431 41 CCCTCTCTCCCTGTCCTCAGACCCTGGAAAAGTGAACCACA CCCTCTCTCCCTGTCCTCAGACACTGGAAAAGTGAACCACA < 41bp 0.548644445369019 0.767249631665505 0.8300159 0.956720471382141 prediction 0.437210372592973 Functional Gain - 23 PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8862411 chr20:8862413 nonsynonymous SNV 0.993 0 hm6A_associated_SNPs_91414 0 0 1 1 8862394 8862416 mRNA hsa-miR-296-3p PLCB1 miRanda miRanda
14034 chr5 86642541 86642541 1 + G A LUSC 86642538 + 86642518 86642558 41 AAGCTTATAATTTACTAATGACAGGTACTTACATATTTACT AAGCTTATAATTTACTAATGACAAGTACTTACATATTTACT < 41bp 0.507493712055922 0.725938817988317 0.026059508 0.0225684642791748 prediction 0.436890211864789 Functional Gain - 24 RASA1 ENSG00000145715 CDS Human protein_coding chr5:86642538 chr5:86642541 nonsynonymous SNV 0.982 1 hm6A_associated_SNPs_91418 0 0 0 1 86642520 86642541 mRNA hsa-miR-217 RASA1 miRanda miRanda
14034 chr3 133306938 133306938 1 + C A rs201232734 133306936 + 133306916 133306956 41 AGGTAACTAGACTGCAGCTAACCACCACCAACAGCCATTCA AGGTAACTAGACTGCAGCTAACAACCACCAACAGCCATTCA < 41bp 0.364677831935863 0.717193735336899 0.69509774 0.915128231048584 prediction 0.434387470673798 Functional Gain - 23 CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133306936 chr3:133306938 . . 0 hm6A_associated_SNPs_91431 0 0 1 1 133306925 133306950 mRNA hsa-miR-9 CDV3 miRanda miRanda
14034 chr17 263856 263856 1 + C T PRAD 263854 + 263834 263874 41 CAATCTCTGTTTTGAAGGAAACCTTACCCCAAAGCTTCTAC CAATCTCTGTTTTGAAGGAAACTTTACCCCAAAGCTTCTAC < 41bp 0.397691507671892 0.716587218658219 0.9908909 0.999015390872955 prediction 0.433174437316437 Functional Gain - 23 C17orf97 ENSG00000187624 CDS Human protein_coding chr17:263854 chr17:263856 nonsynonymous SNV 0.001 1 hm6A_associated_SNPs_91442 0 0 0 1 263856 263879 mRNA hsa-let-7i C17orf97 miRanda miRanda
14034 chr16 11444576 11444576 1 + C T OV 11444574 + 11444554 11444594 41 GCAGGCTGTGAAGATGACAGACCTTTCTGATAATCCCATCC GCAGGCTGTGAAGATGACAGACTTTTCTGATAATCCCATCC < 41bp 0.671691785496288 0.886358671525752 0.32931817 0.890344738960266 prediction 0.429333772058927 Functional Gain - 23 RMI2 ENSG00000175643 CDS Human protein_coding chr16:11444574 chr16:11444576 nonsynonymous SNV 0.949 4 hm6A_associated_SNPs_91457 0 0 1 1 11444565 11444586 mRNA hsa-miR-361-5p C16orf75 miRanda miRanda
14034 chr12 27181251 27181251 1 + C A LUAD 27181249 + 27181229 27181269 41 GTATAAGCTAGAAGAAGAAAACCATGAAGCTGCTACATGTC GTATAAGCTAGAAGAAGAAAACAATGAAGCTGCTACATGTC < 41bp 0.737546651251193 0.944087176145215 0.45298818 0.399805694818497 prediction 0.413081049788043 Functional Gain - 23 MED21 ENSG00000152944 CDS Human protein_coding chr12:27181249 chr12:27181251 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_91546 0 0 1 4 27181242 27181263 mRNA hsa-miR-16 MED21 miRanda miRanda
14034 chr12 27181251 27181251 1 + C A LUAD 27181249 + 27181229 27181269 41 GTATAAGCTAGAAGAAGAAAACCATGAAGCTGCTACATGTC GTATAAGCTAGAAGAAGAAAACAATGAAGCTGCTACATGTC < 41bp 0.737546651251193 0.944087176145215 0.45298818 0.399805694818497 prediction 0.413081049788043 Functional Gain - 23 MED21 ENSG00000152944 CDS Human protein_coding chr12:27181249 chr12:27181251 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_91546 0 0 1 4 27181243 27181263 mRNA hsa-miR-195 MED21 miRanda miRanda
14034 chr12 27181251 27181251 1 + C A LUAD 27181249 + 27181229 27181269 41 GTATAAGCTAGAAGAAGAAAACCATGAAGCTGCTACATGTC GTATAAGCTAGAAGAAGAAAACAATGAAGCTGCTACATGTC < 41bp 0.737546651251193 0.944087176145215 0.45298818 0.399805694818497 prediction 0.413081049788043 Functional Gain - 23 MED21 ENSG00000152944 CDS Human protein_coding chr12:27181249 chr12:27181251 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_91546 0 0 1 4 27181245 27181263 mRNA hsa-miR-497 MED21 miRanda miRanda
14034 chr12 27181251 27181251 1 + C A LUAD 27181249 + 27181229 27181269 41 GTATAAGCTAGAAGAAGAAAACCATGAAGCTGCTACATGTC GTATAAGCTAGAAGAAGAAAACAATGAAGCTGCTACATGTC < 41bp 0.737546651251193 0.944087176145215 0.45298818 0.399805694818497 prediction 0.413081049788043 Functional Gain - 23 MED21 ENSG00000152944 CDS Human protein_coding chr12:27181249 chr12:27181251 nonsynonymous SNV 1.000 1 hm6A_associated_SNPs_91546 0 0 1 4 27181241 27181263 mRNA hsa-miR-503 MED21 miRanda miRanda
14034 chr19 57876316 57876316 1 + C T SKCM 57876314 + 57876294 57876334 41 AGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTG AGACGACCATCGTCATCTGAACTAGTTCATAGCTCATGCTG < 41bp 0.420316175639418 0.706435888662828 0.8168479 0.993486642837524 prediction 0.412871777325657 Functional Gain - 23 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876314 chr19:57876316 stopgain 0.997 1 hm6A_associated_SNPs_91549 0 0 0 7 57876314 57876337 mRNA hsa-miR-15a TRAPPC2P1 miRanda miRanda
14034 chr19 57876316 57876316 1 + C T SKCM 57876314 + 57876294 57876334 41 AGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTG AGACGACCATCGTCATCTGAACTAGTTCATAGCTCATGCTG < 41bp 0.420316175639418 0.706435888662828 0.8168479 0.993486642837524 prediction 0.412871777325657 Functional Gain - 23 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876314 chr19:57876316 stopgain 0.997 1 hm6A_associated_SNPs_91549 0 0 0 7 57876313 57876337 mRNA hsa-miR-16 TRAPPC2P1 miRanda miRanda
14034 chr19 57876316 57876316 1 + C T SKCM 57876314 + 57876294 57876334 41 AGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTG AGACGACCATCGTCATCTGAACTAGTTCATAGCTCATGCTG < 41bp 0.420316175639418 0.706435888662828 0.8168479 0.993486642837524 prediction 0.412871777325657 Functional Gain - 23 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876314 chr19:57876316 stopgain 0.997 1 hm6A_associated_SNPs_91549 0 0 0 7 57876313 57876336 mRNA hsa-miR-103 TRAPPC2P1 miRanda miRanda
14034 chr19 57876316 57876316 1 + C T SKCM 57876314 + 57876294 57876334 41 AGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTG AGACGACCATCGTCATCTGAACTAGTTCATAGCTCATGCTG < 41bp 0.420316175639418 0.706435888662828 0.8168479 0.993486642837524 prediction 0.412871777325657 Functional Gain - 23 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876314 chr19:57876316 stopgain 0.997 1 hm6A_associated_SNPs_91549 0 0 0 7 57876313 57876336 mRNA hsa-miR-107 TRAPPC2P1 miRanda miRanda
14034 chr19 57876316 57876316 1 + C T SKCM 57876314 + 57876294 57876334 41 AGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTG AGACGACCATCGTCATCTGAACTAGTTCATAGCTCATGCTG < 41bp 0.420316175639418 0.706435888662828 0.8168479 0.993486642837524 prediction 0.412871777325657 Functional Gain - 23 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876314 chr19:57876316 stopgain 0.997 1 hm6A_associated_SNPs_91549 0 0 0 7 57876314 57876337 mRNA hsa-miR-15b TRAPPC2P1 miRanda miRanda
14034 chr19 57876316 57876316 1 + C T SKCM 57876314 + 57876294 57876334 41 AGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTG AGACGACCATCGTCATCTGAACTAGTTCATAGCTCATGCTG < 41bp 0.420316175639418 0.706435888662828 0.8168479 0.993486642837524 prediction 0.412871777325657 Functional Gain - 23 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876314 chr19:57876316 stopgain 0.997 1 hm6A_associated_SNPs_91549 0 0 0 7 57876314 57876337 mRNA hsa-miR-424 TRAPPC2P1 miRanda miRanda
14034 chr19 57876316 57876316 1 + C T SKCM 57876314 + 57876294 57876334 41 AGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTG AGACGACCATCGTCATCTGAACTAGTTCATAGCTCATGCTG < 41bp 0.420316175639418 0.706435888662828 0.8168479 0.993486642837524 prediction 0.412871777325657 Functional Gain - 23 TRAPPC2B ENSG00000256060 CDS Human protein_coding chr19:57876314 chr19:57876316 stopgain 0.997 1 hm6A_associated_SNPs_91549 0 0 0 7 57876315 57876337 mRNA hsa-miR-497 TRAPPC2P1 miRanda miRanda
14034 chr1 227920378 227920378 1 + C T SKCM 227920376 + 227920356 227920396 41 CCGAGCAGGACCTCATGATGACCTGGGCAGAGGGAAGAGGC CCGAGCAGGACCTCATGATGACTTGGGCAGAGGGAAGAGGC < 41bp 0.589149789613995 0.794884575741938 0.9797547 0.997041344642639 prediction 0.411469572255886 Functional Gain - 23 JMJD4 ENSG00000081692 splicing Human protein_coding chr1:227920376 chr1:227920378 . 0.959 0 hm6A_associated_SNPs_91561 0 0 0 1 227920374 227920399 mRNA hsa-miR-328 LOC100130093 miRanda miRanda
14034 chr8 37700548 37700548 1 + C A rs376338455 37700546 + 37700526 37700566 41 CCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAG CCCACAGGAGTGGTACTTAAACAAGACAGCAGGGTTCAGAG < 41bp 0.472290746800044 0.705592702760381 0.31166834 0.514981269836426 prediction 0.411185405520761 Functional Gain - 23 ADGRA2 ENSG00000020181 UTR3 Human protein_coding chr8:37700546 chr8:37700548 . . 0 hm6A_associated_SNPs_91566 0 0 0 1 37700536 37700559 mRNA hsa-miR-370 GPR124 miRanda miRanda
14034 chr17 7162966 7162966 1 + C T SKCM 7162964 + 7162944 7162984 41 TGAGCCAGATGCTTATGATGACCTGGACCAAGAAGACCCAG TGAGCCAGATGCTTATGATGACTTGGACCAAGAAGACCCAG < 41bp 0.457053354148585 0.704804055017275 0.8484863 0.985664010047913 prediction 0.40960811003455 Functional Gain - 23 ELP5 ENSG00000170291 CDS Human protein_coding chr17:7162964 chr17:7162966 synonymous SNV . 0 hm6A_associated_SNPs_91579 0 0 1 2 7162954 7162975 mRNA hsa-miR-133a C17orf81 miRanda miRanda
14034 chr17 7162966 7162966 1 + C T SKCM 7162964 + 7162944 7162984 41 TGAGCCAGATGCTTATGATGACCTGGACCAAGAAGACCCAG TGAGCCAGATGCTTATGATGACTTGGACCAAGAAGACCCAG < 41bp 0.457053354148585 0.704804055017275 0.8484863 0.985664010047913 prediction 0.40960811003455 Functional Gain - 23 ELP5 ENSG00000170291 CDS Human protein_coding chr17:7162964 chr17:7162966 synonymous SNV . 0 hm6A_associated_SNPs_91579 0 0 1 2 7162954 7162975 mRNA hsa-miR-133b C17orf81 miRanda miRanda
14034 chr11 43923096 43923096 1 + C T rs2271815 43923094 + 43923074 43923114 41 TGTGCTGCGCACACTAAAGAACCGCATTGAAGAGAACACTG TGTGCTGCGCACACTAAAGAACTGCATTGAAGAGAACACTG < 41bp 0.585748231203392 0.790522377610104 0.75802267 0.961705327033997 prediction 0.409548292813423 Functional Gain - 23 ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43923094 chr11:43923096 nonsynonymous SNV 0.714 2 hm6A_associated_SNPs_91580 0 0 1 2 43923094 43923116 mRNA hsa-miR-199a-5p ALKBH3 miRanda miRanda
14034 chr11 43923096 43923096 1 + C T rs2271815 43923094 + 43923074 43923114 41 TGTGCTGCGCACACTAAAGAACCGCATTGAAGAGAACACTG TGTGCTGCGCACACTAAAGAACTGCATTGAAGAGAACACTG < 41bp 0.585748231203392 0.790522377610104 0.75802267 0.961705327033997 prediction 0.409548292813423 Functional Gain - 23 ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43923094 chr11:43923096 nonsynonymous SNV 0.714 2 hm6A_associated_SNPs_91580 0 0 1 2 43923093 43923116 mRNA hsa-miR-199b-5p ALKBH3 miRanda miRanda
14034 chr1 25780848 25780848 1 + C A UCEC 25780846 + 25780826 25780866 41 TCTCAAAAACTTTCATGTAGACCTTTGTCGTCCATTTGCTG TCTCAAAAACTTTCATGTAGACATTTGTCGTCCATTTGCTG < 41bp 0.154953949201174 0.700619476603425 0.01344043 0.00443339347839355 prediction 0.401238953206849 Functional Gain - 23 TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25780846 chr1:25780848 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_91634 0 0 1 4 25780847 25780869 mRNA hsa-miR-15a TMEM57 miRanda miRanda
14034 chr1 25780848 25780848 1 + C A UCEC 25780846 + 25780826 25780866 41 TCTCAAAAACTTTCATGTAGACCTTTGTCGTCCATTTGCTG TCTCAAAAACTTTCATGTAGACATTTGTCGTCCATTTGCTG < 41bp 0.154953949201174 0.700619476603425 0.01344043 0.00443339347839355 prediction 0.401238953206849 Functional Gain - 23 TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25780846 chr1:25780848 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_91634 0 0 1 4 25780848 25780869 mRNA hsa-miR-16 TMEM57 miRanda miRanda
14034 chr1 25780848 25780848 1 + C A UCEC 25780846 + 25780826 25780866 41 TCTCAAAAACTTTCATGTAGACCTTTGTCGTCCATTTGCTG TCTCAAAAACTTTCATGTAGACATTTGTCGTCCATTTGCTG < 41bp 0.154953949201174 0.700619476603425 0.01344043 0.00443339347839355 prediction 0.401238953206849 Functional Gain - 23 TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25780846 chr1:25780848 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_91634 0 0 1 4 25780847 25780869 mRNA hsa-miR-15b TMEM57 miRanda miRanda
14034 chr1 25780848 25780848 1 + C A UCEC 25780846 + 25780826 25780866 41 TCTCAAAAACTTTCATGTAGACCTTTGTCGTCCATTTGCTG TCTCAAAAACTTTCATGTAGACATTTGTCGTCCATTTGCTG < 41bp 0.154953949201174 0.700619476603425 0.01344043 0.00443339347839355 prediction 0.401238953206849 Functional Gain - 23 TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25780846 chr1:25780848 nonsynonymous SNV 1.000 4 hm6A_associated_SNPs_91634 0 0 1 4 25780848 25780869 mRNA hsa-miR-424 TMEM57 miRanda miRanda