| Column name |
Description |
|
mod_name
|
name of the human m6A site (defined by us)
|
|
chromosome
|
chromosome where the m6A site located
|
|
modStart
|
Position of the site on chromosome
|
|
strand
|
Strand of the RNA ("+" or "-")
|
|
site_gene
|
Gene symbol where the m6A site located
|
|
site_entrez
|
Gene entrez ID where the m6A site located
|
|
neighborsites_count
|
Count of neighbor sites of each hub site
|
|
neighbor_gene_count
|
Count of genes where neighbor sites of each hub site located
|
|
GO_hubself
|
GO BP terms of the gene where the m6A site located
|
|
GO_hubself_slim
|
GO BP Slim terms of the gene where the m6A site located
|
|
Hub_neighbor_predict
|
GO BP terms of neighbor sites (corresponding genes) on each hub site
|
|
Hub_neighbor_predict_slim
|
GO BP Slim terms of neighbor sites (corresponding genes) on each hub site
|
|
Hit_slim
|
Overlaping GO BP Slim terms of the “GO_hubself_slim” column and “GO_predict_slim” column
|
|
Module_predict
|
GO BP terms of the sites predicted by the module-based method
|