ChunkTX

Function: ChunkTX Feature Extraction

The following options are available:

Genome: either hg19 or hg38.
Annotation (two TxDbs and four Ensembl Dbs from Bioconductor):
1) TxDb19 and EnsDb75 (TxDb.Hsapiens.UCSC.hg19.knownGene / Ensembl v75 for hg19)
2) TxDb38, EnsDb79, and EnsDb86 (TxDb.Hsapiens.UCSC.hg38.knownGene / Ensembl v79 / Ensembl v86 / Ensembl v104 for hg38)
Exon only: either TRUE or FALSE (whether the site can only be mapped to exonic regions)
Longest transcript only: either TRUE or FALSE (whether to consider only the longest transcript)
Protein coding only: either TRUE or FALSE (whether to consider only protein coding transcripts)
Encoding: one of the following Geo2vec encodings (onehotTX, landmarkTX, gridTX, chunkTX)
E-mail Address: a notification will be sent to the Email when your job is finished.

Genome:

Annotation:

Exon only:

Longest transcript only:

Protein coding only:

E-mail Address: (Optional)

Encoding:

Input Data: BED Format

Or you can upoad your own file：

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