Geo2vec
: Geographic encoding of transcripts enabled high-accuracy and isoform-aware deep learning of m6A RNA methylation sites
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Function: Site Prediction
The following options are available:
Genome: only support hg38.
Annotation: only support Ensembl v104 for hg38
Exon only: only support Exon = TRUE (the site can only be mapped to exonic regions)
Longest transcript only: either TRUE or FALSE (whether to consider only the longest transcript)
Protein coding only: only support Protein coding = TRUE (consider only protein coding transcripts)
Threshold: threshold for classification. (default: 0.5)
E-mail Address: a notification will be sent to the Email when your job is finished.
Genome:
hg38
Annotation:
EnsDb104 (hg38)
Exon only:
TRUE
Longest transcript only:
TRUE
FALSE
Protein coding only:
TRUE
Threshold:
0.4
0.5
0.6
0.7
E-mail Address: (Optional)
Input Data:
BED Format
Or you can upoad your own file：
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